Method VarType Scaf Position VarLen Reference Varient SOAPScaf ScafM SNP 0001.scaffold00002 2123 1 C A scaffold16834 ScafM SNP 0001.scaffold00002 2168 1 T G scaffold16834 ScafM SNP 0001.scaffold00002 2175 1 G C scaffold16834 ScafM SNP 0001.scaffold00002 2241 1 G A scaffold16834 ScafM SNP 0001.scaffold00002 4688 1 G T scaffold8839 ScafM SNP 0001.scaffold00002 4706 1 G T scaffold8839 ScafM SNP 0001.scaffold00002 4732 1 T G scaffold8839 ScafM SNP 0001.scaffold00002 4756 1 C A scaffold8839 ScafM SNP 0001.scaffold00002 4764 1 T C scaffold8839 ScafM SNP 0001.scaffold00002 4783 1 C G scaffold8839 ScafM SNP 0001.scaffold00002 5496 1 A C scaffold8839 ScafM SNP 0001.scaffold00002 5526 1 C A scaffold8839 ScafM INDEL 0001.scaffold00002 5553 4 TATA .... scaffold8839 ScafM SNP 0001.scaffold00002 5629 1 C T scaffold8839 ScafM INDEL 0001.scaffold00002 5730 5 ..... TAATA scaffold8839 ScafM INDEL 0001.scaffold00002 5761 7 ....... CGCTTGA scaffold8839 ScafM SNP 0001.scaffold00002 5793 1 G A scaffold8839 ScafM INDEL 0001.scaffold00002 5814 13 ............. CCCATCCTCAAAA scaffold8839 ScafM INDEL 0001.scaffold00002 5968 4 ATAC .... scaffold8839 ScafM INDEL 0001.scaffold00002 5981 8 AAGCAGAC ........ scaffold8839 ScafM INDEL 0001.scaffold00002 5995 2 TT .. scaffold8839 ScafM SNP 0001.scaffold00002 6045 1 A C scaffold8839 ScafM SNP 0001.scaffold00002 6069 1 T C scaffold8839 ScafM INDEL 0001.scaffold00002 6124 7 TTAAGTC ....... scaffold8839 ScafM SNP 0001.scaffold00002 6142 1 A G scaffold8839 ScafM SNP 0001.scaffold00002 6174 1 C T scaffold8839 ReadM SNP 0001.scaffold00002 13388 1 C A - ReadM SNP 0001.scaffold00002 13425 1 T C - ScafM SNP 0001.scaffold00002 13594 1 C T scaffold2300 ScafM INDEL 0001.scaffold00002 13599 1 . C scaffold2300 ScafM SNP 0001.scaffold00002 17625 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 17641 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 17644 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 17661 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 17679 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 17723 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 17725 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 18039 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 18043 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 18056 5 ..... TTTAA scaffold3327 ScafM INDEL 0001.scaffold00002 18064 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 18119 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 18130 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 18148 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 18182 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 18186 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 18190 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 18213 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 18431 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 18451 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 18463 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 18474 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 18507 1 A T scaffold3327 ReadM SNP 0001.scaffold00002 19087 1 C A - ScafM INDEL 0001.scaffold00002 19593 3 AAT ... scaffold3327 ScafM SNP 0001.scaffold00002 19625 1 A C scaffold3327 Both SNP 0001.scaffold00002 19689 1 T C scaffold3327 Both SNP 0001.scaffold00002 19728 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 19833 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 19845 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 19851 1 T C scaffold3327 Both SNP 0001.scaffold00002 19939 1 A T scaffold3327 Both SNP 0001.scaffold00002 20028 1 G A scaffold3327 Both SNP 0001.scaffold00002 20139 1 A G scaffold3327 Both SNP 0001.scaffold00002 20187 1 G A scaffold3327 Both SNP 0001.scaffold00002 20238 1 A C scaffold3327 Both SNP 0001.scaffold00002 20240 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 20296 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 20300 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 20321 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 20323 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 20350 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 20518 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 20543 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 20552 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 20558 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 20577 1 G A scaffold3327 ReadM SNP 0001.scaffold00002 21059 1 C A - ReadM SNP 0001.scaffold00002 21073 1 A G - ReadM SNP 0001.scaffold00002 21080 1 A C - ScafM SNP 0001.scaffold00002 21785 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 21838 1 G A scaffold3327 Both SNP 0001.scaffold00002 21908 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 22029 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 22037 1 . G scaffold3327 ScafM SNP 0001.scaffold00002 22049 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 22082 3 ... TTT scaffold3327 ScafM SNP 0001.scaffold00002 22096 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 22185 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 22702 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 22717 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 22764 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 22785 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 22787 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 22807 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 22826 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 22837 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 22851 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 22865 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 22890 1 G A scaffold3327 Both SNP 0001.scaffold00002 22933 1 A G scaffold3327 Both SNP 0001.scaffold00002 23035 1 A C scaffold3327 Both SNP 0001.scaffold00002 23042 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 23106 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 23113 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 23132 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 23159 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 23178 1 T C scaffold3327 Both SNP 0001.scaffold00002 23222 1 A T scaffold3327 Both SNP 0001.scaffold00002 23243 1 G A scaffold3327 Both INDEL 0001.scaffold00002 23329 2 TG .. scaffold3327 Both SNP 0001.scaffold00002 23446 1 G A scaffold3327 Both SNP 0001.scaffold00002 23492 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 23720 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 23733 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 23739 2 AC TA scaffold3327 ScafM SNP 0001.scaffold00002 23748 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 23750 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 23770 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 23779 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 23782 1 A G scaffold3327 Both SNP 0001.scaffold00002 23875 1 C G scaffold3327 Both SNP 0001.scaffold00002 23956 1 A G scaffold3327 Both INDEL 0001.scaffold00002 24031 1 G . scaffold3327 Both SNP 0001.scaffold00002 24193 1 G C scaffold3327 Both INDEL 0001.scaffold00002 24263 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 24382 4 GATT .... scaffold3327 ScafM SNP 0001.scaffold00002 24428 1 A T scaffold3327 Both SNP 0001.scaffold00002 24452 1 G T scaffold3327 Both SNP 0001.scaffold00002 24456 1 G C scaffold3327 ReadM INDEL 0001.scaffold00002 24483 1 T . - Both SNP 0001.scaffold00002 24572 1 A G scaffold3327 Both SNP 0001.scaffold00002 24608 1 T C scaffold3327 Both SNP 0001.scaffold00002 25103 1 T A scaffold3327 Both SNP 0001.scaffold00002 25268 1 G A scaffold3327 Both INDEL 0001.scaffold00002 25343 1 A . scaffold3327 Both SNP 0001.scaffold00002 25530 1 G A scaffold3327 Both SNP 0001.scaffold00002 25548 1 T C scaffold3327 Both SNP 0001.scaffold00002 25855 1 G A scaffold3327 Both SNP 0001.scaffold00002 26273 1 T A scaffold3327 Both INDEL 0001.scaffold00002 26291 1 T . scaffold3327 Both SNP 0001.scaffold00002 26419 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 26955 1 T C scaffold3327 Both SNP 0001.scaffold00002 26983 1 T C scaffold3327 Both INDEL 0001.scaffold00002 27009 1 . A scaffold3327 ScafM INDEL 0001.scaffold00002 27448 26 AAGTATAACTGTATAACAAGGAAATT .......................... scaffold3327 ScafM INDEL 0001.scaffold00002 27493 8 ........ ATATTTTT scaffold3327 ScafM SNP 0001.scaffold00002 27495 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 27732 2 CT TC scaffold3327 Both SNP 0001.scaffold00002 27923 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 28020 1 G A scaffold3327 Both SNP 0001.scaffold00002 28032 1 C T scaffold3327 Both SNP 0001.scaffold00002 28038 1 G A scaffold3327 Both SNP 0001.scaffold00002 28078 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 28402 1 G T scaffold3327 ReadM SNP 0001.scaffold00002 28441 1 A G - ScafM SNP 0001.scaffold00002 28496 1 C A scaffold3327 Both SNP 0001.scaffold00002 28580 1 G C scaffold3327 Both SNP 0001.scaffold00002 28690 1 A G scaffold3327 Both INDEL 0001.scaffold00002 28836 1 A . scaffold3327 Both INDEL 0001.scaffold00002 29081 1 A . scaffold3327 Both SNP 0001.scaffold00002 29504 1 G T scaffold3327 Both SNP 0001.scaffold00002 29601 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 29608 1 G A scaffold3327 ReadM SNP 0001.scaffold00002 29838 1 C T - ReadM SNP 0001.scaffold00002 29933 1 C T - ReadM SNP 0001.scaffold00002 30010 1 G C - ReadM SNP 0001.scaffold00002 30060 1 C T - ReadM SNP 0001.scaffold00002 30065 1 T A - ReadM INDEL 0001.scaffold00002 30222 1 . T - ReadM INDEL 0001.scaffold00002 30823 1 A . - ReadM SNP 0001.scaffold00002 31050 1 C G - ReadM SNP 0001.scaffold00002 31259 1 G A - ScafM SNP 0001.scaffold00002 31829 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 31847 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 31862 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 31866 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 31913 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 31915 12 ............ AAAAAAAAAAAA scaffold3327 ScafM SNP 0001.scaffold00002 31924 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 31952 1 A G scaffold3327 Both SNP 0001.scaffold00002 32018 1 T C scaffold3327 Both SNP 0001.scaffold00002 32152 1 C T scaffold3327 Both SNP 0001.scaffold00002 32156 1 T C scaffold3327 Both SNP 0001.scaffold00002 32212 1 A G scaffold3327 Both SNP 0001.scaffold00002 32219 1 T C scaffold3327 Both SNP 0001.scaffold00002 32228 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 32291 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 32306 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 32317 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 32320 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 33811 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 33824 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 33828 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 33851 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 33864 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 33874 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 33876 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 33885 4 CTAT TCGG scaffold3327 ScafM INDEL 0001.scaffold00002 33895 2 .. CG scaffold3327 ScafM SNP 0001.scaffold00002 33905 2 AA GG scaffold3327 ScafM SNP 0001.scaffold00002 33913 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 33916 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 33918 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 33928 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 33929 2 .. AA scaffold3327 ScafM INDEL 0001.scaffold00002 33949 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 33951 6 TTTTTT AAAAAA scaffold3327 ScafM SNP 0001.scaffold00002 33961 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 33974 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 34019 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 34023 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 34032 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 34060 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 34064 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 34073 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 34117 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 34134 4 CCTA .... scaffold3327 ScafM SNP 0001.scaffold00002 34150 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 34154 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 34199 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 34264 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 34303 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 34305 2 GA AG scaffold3327 ScafM SNP 0001.scaffold00002 34406 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 34419 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 34448 2 CG TC scaffold3327 ScafM SNP 0001.scaffold00002 34499 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 34505 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 34571 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 34579 4 AAAG .... scaffold3327 ScafM INDEL 0001.scaffold00002 34590 3 ... AAA scaffold3327 ScafM INDEL 0001.scaffold00002 34648 2 AT .. scaffold3327 ScafM SNP 0001.scaffold00002 34651 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 34675 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 34677 2 GT .. scaffold3327 ScafM SNP 0001.scaffold00002 34693 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 34709 1 G A scaffold3327 ReadM SNP 0001.scaffold00002 36702 1 T G - ReadM SNP 0001.scaffold00002 36732 1 T C - ReadM SNP 0001.scaffold00002 37881 1 A C - ReadM SNP 0001.scaffold00002 38173 1 G A - ReadM SNP 0001.scaffold00002 38288 1 G A - ReadM SNP 0001.scaffold00002 38302 1 G A - ReadM SNP 0001.scaffold00002 38391 1 T C - ReadM SNP 0001.scaffold00002 38407 1 G C - ScafM SNP 0001.scaffold00002 39143 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 39167 2 .. CA scaffold3327 ScafM SNP 0001.scaffold00002 39184 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 39194 2 .. TT scaffold3327 ScafM SNP 0001.scaffold00002 39196 6 GCGACA TTTTTT scaffold3327 ScafM SNP 0001.scaffold00002 39235 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 39316 13 ............. TCATCCCCTCATT scaffold3327 ScafM SNP 0001.scaffold00002 39341 2 TC AT scaffold3327 ScafM SNP 0001.scaffold00002 39394 1 T C scaffold3327 Both INDEL 0001.scaffold00002 39456 1 G . scaffold3327 Both SNP 0001.scaffold00002 39462 1 C G scaffold3327 Both SNP 0001.scaffold00002 39523 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 39547 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 39571 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 39599 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 39605 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 39828 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 39878 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 39915 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 39926 8 CGAAAAAT ........ scaffold3327 ReadM SNP 0001.scaffold00002 40107 1 A T - ReadM SNP 0001.scaffold00002 40195 1 A G - ReadM SNP 0001.scaffold00002 40221 1 A T - ReadM SNP 0001.scaffold00002 40271 1 T C - ReadM SNP 0001.scaffold00002 40296 1 G A - ReadM SNP 0001.scaffold00002 40397 1 C G - ReadM SNP 0001.scaffold00002 40432 1 G A - ReadM SNP 0001.scaffold00002 40477 1 C A - ScafM INDEL 0001.scaffold00002 40872 1 G . scaffold3327 ScafM SNP 0001.scaffold00002 40944 1 T C scaffold3327 Both SNP 0001.scaffold00002 41077 1 T C scaffold3327 Both SNP 0001.scaffold00002 41580 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 41760 1 A G scaffold3327 Both SNP 0001.scaffold00002 41812 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 41889 3 ... AAA scaffold3327 ScafM INDEL 0001.scaffold00002 42488 20 GCAGCAATAGGATGCACAAC .................... scaffold3327 ScafM INDEL 0001.scaffold00002 42509 4 GTAG .... scaffold3327 Both INDEL 0001.scaffold00002 42936 2 AC .. scaffold3327 Both SNP 0001.scaffold00002 43179 1 G T scaffold3327 Both SNP 0001.scaffold00002 43345 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 43687 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 44361 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 44363 1 T A scaffold3327 Both SNP 0001.scaffold00002 44542 1 G A scaffold3327 Both SNP 0001.scaffold00002 44576 1 G A scaffold3327 Both SNP 0001.scaffold00002 45340 1 T G scaffold3327 ReadM INDEL 0001.scaffold00002 45402 1 A . - ReadM SNP 0001.scaffold00002 45488 1 C T - ReadM SNP 0001.scaffold00002 45744 1 A G - Both SNP 0001.scaffold00002 46479 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 46516 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 46519 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 46546 2 AA TT scaffold3327 Both SNP 0001.scaffold00002 46847 1 G A scaffold3327 ReadM SNP 0001.scaffold00002 47245 1 A T - Both SNP 0001.scaffold00002 47337 1 C T scaffold3327 ReadM SNP 0001.scaffold00002 47494 1 G A - ReadM SNP 0001.scaffold00002 47503 1 G A - ReadM SNP 0001.scaffold00002 47597 1 A G - ReadM SNP 0001.scaffold00002 47964 1 C T - ReadM SNP 0001.scaffold00002 48228 1 A G - ReadM INDEL 0001.scaffold00002 48527 1 . A - ReadM SNP 0001.scaffold00002 48539 1 G A - ReadM SNP 0001.scaffold00002 48544 1 C A - ReadM SNP 0001.scaffold00002 48626 1 A G - ReadM SNP 0001.scaffold00002 48706 1 A G - ReadM SNP 0001.scaffold00002 48726 1 T C - ReadM SNP 0001.scaffold00002 48882 1 G A - ReadM SNP 0001.scaffold00002 48920 1 T G - ReadM SNP 0001.scaffold00002 48944 1 T G - ReadM SNP 0001.scaffold00002 48970 1 A C - ReadM SNP 0001.scaffold00002 49180 1 G C - ReadM SNP 0001.scaffold00002 49199 1 T C - ReadM SNP 0001.scaffold00002 49227 1 A G - ReadM SNP 0001.scaffold00002 49232 1 G A - ReadM SNP 0001.scaffold00002 49260 1 A C - ReadM SNP 0001.scaffold00002 49416 1 C T - ReadM SNP 0001.scaffold00002 49559 1 A G - ReadM SNP 0001.scaffold00002 49727 1 A G - ReadM SNP 0001.scaffold00002 49755 1 C T - ReadM SNP 0001.scaffold00002 49843 1 T C - ReadM INDEL 0001.scaffold00002 50103 1 . C - ReadM SNP 0001.scaffold00002 50170 1 A G - ReadM INDEL 0001.scaffold00002 50312 1 C . - ReadM SNP 0001.scaffold00002 50368 1 C T - ReadM SNP 0001.scaffold00002 50576 1 C T - ReadM SNP 0001.scaffold00002 50807 1 T A - ReadM SNP 0001.scaffold00002 50819 1 A G - ReadM SNP 0001.scaffold00002 50867 1 C A - ReadM SNP 0001.scaffold00002 51002 1 T C - ReadM SNP 0001.scaffold00002 51006 1 C G - ReadM SNP 0001.scaffold00002 51035 1 T C - ReadM SNP 0001.scaffold00002 51189 2 AA GC - ReadM SNP 0001.scaffold00002 51361 1 G A - ReadM SNP 0001.scaffold00002 51407 1 G A - ReadM SNP 0001.scaffold00002 51444 1 C T - ReadM SNP 0001.scaffold00002 51472 1 A T - ReadM INDEL 0001.scaffold00002 51885 1 . A - ReadM SNP 0001.scaffold00002 51938 1 T C - ReadM SNP 0001.scaffold00002 52033 1 A T - Both SNP 0001.scaffold00002 52439 1 A G scaffold3327 Both SNP 0001.scaffold00002 52539 1 G A scaffold3327 Both SNP 0001.scaffold00002 52559 1 C T scaffold3327 Both SNP 0001.scaffold00002 52614 1 A T scaffold3327 Both SNP 0001.scaffold00002 52657 1 A G scaffold3327 Both SNP 0001.scaffold00002 53127 1 A T scaffold3327 Both SNP 0001.scaffold00002 53226 1 T G scaffold3327 ReadM SNP 0001.scaffold00002 54103 1 T C - ReadM SNP 0001.scaffold00002 54505 1 C A - Both SNP 0001.scaffold00002 55291 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 55475 7 ....... GGCTGGG scaffold3327 ReadM SNP 0001.scaffold00002 55624 1 C T - ReadM SNP 0001.scaffold00002 55668 1 A G - ReadM SNP 0001.scaffold00002 55679 1 A G - ReadM SNP 0001.scaffold00002 55873 1 C T - ReadM SNP 0001.scaffold00002 56036 1 T A - Both SNP 0001.scaffold00002 56199 1 T C scaffold3327 Both SNP 0001.scaffold00002 56301 1 C T scaffold3327 Both SNP 0001.scaffold00002 56304 1 G A scaffold3327 Both INDEL 0001.scaffold00002 56696 1 G . scaffold3327 Both SNP 0001.scaffold00002 56773 1 A C scaffold3327 Both SNP 0001.scaffold00002 56941 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 57012 6 ...... TGTAAT scaffold3327 Both SNP 0001.scaffold00002 57098 1 C T scaffold3327 Both SNP 0001.scaffold00002 57165 1 C A scaffold3327 Both SNP 0001.scaffold00002 57412 1 G A scaffold3327 Both SNP 0001.scaffold00002 57770 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 57938 9 TACAAGAAA ......... scaffold3327 ScafM SNP 0001.scaffold00002 58103 1 T A scaffold3327 Both INDEL 0001.scaffold00002 58395 1 . G scaffold3327 ScafM INDEL 0001.scaffold00002 59047 2 CC .. scaffold3327 Both INDEL 0001.scaffold00002 59105 1 G . scaffold3327 Both SNP 0001.scaffold00002 59598 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 59708 7 ....... GTTTTTT scaffold3327 Both SNP 0001.scaffold00002 60112 1 C T scaffold3327 Both SNP 0001.scaffold00002 60478 1 T A scaffold3327 Both SNP 0001.scaffold00002 60591 1 T C scaffold3327 Both SNP 0001.scaffold00002 60771 1 T G scaffold3327 Both SNP 0001.scaffold00002 60904 1 T A scaffold3327 Both SNP 0001.scaffold00002 61031 1 G T scaffold3327 Both SNP 0001.scaffold00002 61772 1 T G scaffold3327 Both SNP 0001.scaffold00002 62264 1 G A scaffold3327 Both SNP 0001.scaffold00002 62339 1 G A scaffold3327 Both SNP 0001.scaffold00002 62457 1 A G scaffold3327 Both INDEL 0001.scaffold00002 62487 1 T . scaffold3327 Both SNP 0001.scaffold00002 62531 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 62562 3 ATT TGC scaffold3327 ScafM SNP 0001.scaffold00002 62606 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 62617 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 62620 7 ....... ATGAAAG scaffold3327 ScafM SNP 0001.scaffold00002 62657 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 62665 1 C T scaffold3327 Both SNP 0001.scaffold00002 62716 1 A T scaffold3327 Both SNP 0001.scaffold00002 62722 1 G A scaffold3327 Both SNP 0001.scaffold00002 62757 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 62783 2 TG CT scaffold3327 ScafM SNP 0001.scaffold00002 62823 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 62834 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 62838 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 62850 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 62856 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 62873 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 62880 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 62897 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 62903 1 . C scaffold3327 ScafM INDEL 0001.scaffold00002 62908 3 ... CTT scaffold3327 ScafM SNP 0001.scaffold00002 62913 2 CT GC scaffold3327 ScafM SNP 0001.scaffold00002 62939 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 62942 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 62981 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 62997 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 63008 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 63018 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63048 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63060 1 T C scaffold3327 Both SNP 0001.scaffold00002 63072 1 T C scaffold3327 Both SNP 0001.scaffold00002 63155 1 G A scaffold3327 Both SNP 0001.scaffold00002 63158 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 63246 2 AG GA scaffold3327 ScafM INDEL 0001.scaffold00002 63293 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 63295 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 63301 5 ..... ATGGA scaffold3327 ScafM SNP 0001.scaffold00002 63430 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 63435 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63451 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63466 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 63495 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 63508 4 .CCT TTGG scaffold3327 ScafM SNP 0001.scaffold00002 63518 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63524 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63537 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 63541 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 63546 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63582 3 ACA GTG scaffold3327 ScafM SNP 0001.scaffold00002 63586 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 63595 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 63617 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63624 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63631 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63640 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63642 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 63659 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 63675 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 63685 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 63692 28 CAGAAGCGGAATTGCCACAGCCACATAT ............................ scaffold3327 ScafM SNP 0001.scaffold00002 63727 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63785 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63806 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63818 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 63820 2 TG .. scaffold3327 ScafM SNP 0001.scaffold00002 63832 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 63851 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63863 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 63867 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 63875 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63886 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 63895 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 63901 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 63954 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63959 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 63964 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 63973 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 63981 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 63995 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 63998 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 64007 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 64017 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 64035 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 64057 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 64084 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 64103 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 64107 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 67281 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 67283 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 67295 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 67324 4 .... TATA scaffold3327 ScafM SNP 0001.scaffold00002 67331 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 67347 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 67358 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 67373 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 67376 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 67382 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 67400 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 67419 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 67463 2 TG CA scaffold3327 ScafM SNP 0001.scaffold00002 67470 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 67481 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 67490 3 ... AAT scaffold3327 ScafM SNP 0001.scaffold00002 67509 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 67512 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 67519 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67527 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 67534 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 67541 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 67543 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67555 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 67570 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67587 2 CC TT scaffold3327 ScafM SNP 0001.scaffold00002 67600 2 GG TA scaffold3327 ScafM SNP 0001.scaffold00002 67621 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67630 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 67653 2 CT GA scaffold3327 ScafM SNP 0001.scaffold00002 67662 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 67680 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 67692 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 67874 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 67884 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67886 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 67898 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 67905 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 67942 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 67965 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 67968 2 CG TC scaffold3327 ScafM SNP 0001.scaffold00002 67999 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 68005 2 TC CA scaffold3327 ScafM SNP 0001.scaffold00002 68041 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 68044 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 68066 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 68092 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 68099 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 68145 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 68155 2 GT TA scaffold3327 ScafM SNP 0001.scaffold00002 68164 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 68201 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 68221 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 68230 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68239 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 68302 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 68315 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68317 2 GT AA scaffold3327 ScafM SNP 0001.scaffold00002 68320 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 68332 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68361 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 68366 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 68368 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68378 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 68388 3 AAT GGC scaffold3327 ScafM INDEL 0001.scaffold00002 68405 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 68407 1 T . scaffold3327 ScafM INDEL 0001.scaffold00002 68410 5 AATGT ..... scaffold3327 ScafM INDEL 0001.scaffold00002 68429 6 CTGCAC ...... scaffold3327 ScafM INDEL 0001.scaffold00002 68437 2 GC .. scaffold3327 ScafM INDEL 0001.scaffold00002 68440 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 68445 27 AGGATGTGGGAACTCCTTCAATCCTAT ........................... scaffold3327 ScafM INDEL 0001.scaffold00002 68475 2 CC .. scaffold3327 ScafM INDEL 0001.scaffold00002 68482 5 AACTT ..... scaffold3327 ScafM INDEL 0001.scaffold00002 68490 7 GTCTAAA ....... scaffold3327 ScafM INDEL 0001.scaffold00002 68498 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 68501 10 AATTATTCAA .......... scaffold3327 ScafM INDEL 0001.scaffold00002 68513 4 AAAT .... scaffold3327 ScafM INDEL 0001.scaffold00002 68518 1 A . scaffold3327 ScafM INDEL 0001.scaffold00002 68520 1 C . scaffold3327 ScafM INDEL 0001.scaffold00002 68524 4 ATAA ...G scaffold3327 ScafM SNP 0001.scaffold00002 68532 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 68538 2 GT .. scaffold3327 ScafM SNP 0001.scaffold00002 68546 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 68548 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 68556 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68558 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 68562 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 68572 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 68612 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 68622 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 68629 2 GA TT scaffold3327 ScafM SNP 0001.scaffold00002 68632 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 68657 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 68680 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 68711 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 68740 4 .... TATA scaffold3327 ScafM INDEL 0001.scaffold00002 68764 2 AT .. scaffold3327 ScafM SNP 0001.scaffold00002 68773 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 68804 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 72112 3 CAG ... scaffold6154 ScafM SNP 0001.scaffold00002 72127 1 T C scaffold6154 ScafM SNP 0001.scaffold00002 72135 1 A G scaffold6154 ScafM SNP 0001.scaffold00002 72140 1 A C scaffold6154 ScafM SNP 0001.scaffold00002 72152 1 G A scaffold6154 ScafM INDEL 0001.scaffold00002 72165 5 CCAGC ..... scaffold6154 ScafM INDEL 0001.scaffold00002 72171 4 CAGC .... scaffold6154 ScafM SNP 0001.scaffold00002 72510 1 A T scaffold6154 ScafM INDEL 0001.scaffold00002 72539 3 TCT ... scaffold6154 ScafM INDEL 0001.scaffold00002 72545 3 TCT ... scaffold6154 ScafM SNP 0001.scaffold00002 72561 1 A T scaffold6154 ScafM SNP 0001.scaffold00002 72564 1 C T scaffold6154 ScafM SNP 0001.scaffold00002 72568 1 A G scaffold6154 ScafM SNP 0001.scaffold00002 72588 1 A G scaffold6154 ScafM SNP 0001.scaffold00002 72599 1 A C scaffold6154 ScafM SNP 0001.scaffold00002 76498 1 C T scaffold692 ScafM SNP 0001.scaffold00002 76527 1 T C scaffold692 ScafM SNP 0001.scaffold00002 76542 1 A G scaffold692 ScafM SNP 0001.scaffold00002 76599 1 A T scaffold692 ScafM SNP 0001.scaffold00002 76604 1 T C scaffold692 ScafM SNP 0001.scaffold00002 76616 1 A C scaffold692 ScafM SNP 0001.scaffold00002 76661 1 A G scaffold692 ReadM SNP 0001.scaffold00002 76956 1 T C - ScafM SNP 0001.scaffold00002 78637 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 78642 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 78644 2 AA GT scaffold3327 ScafM INDEL 0001.scaffold00002 78708 16 ................ CCCATATTCCAAAAAT scaffold3327 ScafM SNP 0001.scaffold00002 78721 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 78740 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 78765 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 78773 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 78804 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 78874 2 GG TC scaffold3327 ScafM SNP 0001.scaffold00002 78879 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 78881 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 78890 3 ATA ... scaffold3327 ScafM SNP 0001.scaffold00002 78901 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 78918 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 78927 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 78929 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 78960 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 78988 3 ... TTG scaffold3327 ScafM SNP 0001.scaffold00002 79000 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 79025 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 79053 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 79068 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 79099 2 .. TA scaffold3327 ScafM SNP 0001.scaffold00002 79106 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 79131 2 AT TA scaffold3327 ScafM SNP 0001.scaffold00002 79147 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 79181 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 79234 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 79241 2 CA TT scaffold3327 ScafM SNP 0001.scaffold00002 79253 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 79295 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 79335 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 79378 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 79415 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 79429 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 79470 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 79502 2 .. TG scaffold3327 ScafM SNP 0001.scaffold00002 79519 1 A T scaffold3327 ReadM INDEL 0001.scaffold00002 79995 1 . C - ScafM SNP 0001.scaffold00002 80718 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 80728 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 80738 2 TG .. scaffold3327 ScafM INDEL 0001.scaffold00002 80745 1 C . scaffold3327 ScafM INDEL 0001.scaffold00002 80756 2 TT .. scaffold3327 ScafM INDEL 0001.scaffold00002 80761 3 TGT ..C scaffold3327 ScafM SNP 0001.scaffold00002 80787 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 80790 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 80799 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 80806 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 80810 2 AT TG scaffold3327 ScafM SNP 0001.scaffold00002 80847 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 80853 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 80865 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 80867 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 80885 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 81128 2 AG CA scaffold3327 ScafM SNP 0001.scaffold00002 81135 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 81169 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 81192 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 81195 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 81213 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 81235 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 81286 2 .. AA scaffold3327 ScafM SNP 0001.scaffold00002 81292 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 81294 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 81304 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 81332 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 81334 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 81343 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 81404 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 81438 13 ............. GATTCACTAGTTT scaffold3327 ScafM SNP 0001.scaffold00002 81450 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 81455 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 82442 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 82458 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 82461 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 82473 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 82474 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 82478 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 82483 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 82489 1 C T scaffold3327 Both SNP 0001.scaffold00002 82541 1 T C scaffold3327 Both SNP 0001.scaffold00002 82731 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 82997 5 ..... TCTTT scaffold3327 ScafM INDEL 0001.scaffold00002 83009 1 . G scaffold3327 ScafM SNP 0001.scaffold00002 83034 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 83046 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 83057 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 83071 1 C . scaffold3327 ScafM INDEL 0001.scaffold00002 83189 2 .G AA scaffold3327 ScafM SNP 0001.scaffold00002 83227 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 83230 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 83250 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 83256 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 83269 6 .....G AAAAAA scaffold3327 ReadM SNP 0001.scaffold00002 83375 1 C T - ScafM INDEL 0001.scaffold00002 84033 6 ...... TTTTTT scaffold3327 ScafM INDEL 0001.scaffold00002 84047 1 G . scaffold3327 ScafM INDEL 0001.scaffold00002 84063 1 C . scaffold3327 ScafM INDEL 0001.scaffold00002 84065 1 G . scaffold3327 ScafM SNP 0001.scaffold00002 84085 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 84115 1 C G scaffold3327 Both SNP 0001.scaffold00002 84232 1 C T scaffold3327 Both SNP 0001.scaffold00002 84319 1 C A scaffold3327 Both SNP 0001.scaffold00002 84357 1 C G scaffold3327 ReadM SNP 0001.scaffold00002 84788 1 T C - ReadM SNP 0001.scaffold00002 84798 1 T A - ReadM INDEL 0001.scaffold00002 84828 1 . C - ReadM SNP 0001.scaffold00002 84844 1 G A - ReadM SNP 0001.scaffold00002 85114 1 T C - ReadM SNP 0001.scaffold00002 85425 1 C T - ReadM SNP 0001.scaffold00002 87908 1 A T - ReadM SNP 0001.scaffold00002 87915 1 C T - ReadM SNP 0001.scaffold00002 87987 1 T C - ReadM SNP 0001.scaffold00002 88397 1 C T - ReadM SNP 0001.scaffold00002 89469 1 C T - ReadM SNP 0001.scaffold00002 89681 1 T G - ReadM SNP 0001.scaffold00002 89982 1 C A - ReadM SNP 0001.scaffold00002 89994 1 A G - ReadM SNP 0001.scaffold00002 90042 1 G C - ReadM SNP 0001.scaffold00002 90100 1 A C - ReadM SNP 0001.scaffold00002 90343 1 G A - ReadM SNP 0001.scaffold00002 90418 1 A C - ReadM INDEL 0001.scaffold00002 90480 1 G . - ScafM SNP 0001.scaffold00002 90713 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 90717 2 TT CC scaffold3327 ScafM SNP 0001.scaffold00002 90741 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 90819 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 90822 2 CA TC scaffold3327 ScafM SNP 0001.scaffold00002 90874 2 GG AA scaffold3327 ScafM SNP 0001.scaffold00002 90946 1 A T scaffold3327 ReadM SNP 0001.scaffold00002 91890 1 C T - ReadM SNP 0001.scaffold00002 91896 1 C G - Both SNP 0001.scaffold00002 91963 1 T C scaffold3327 Both SNP 0001.scaffold00002 92026 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 92110 2 .. AA scaffold3327 ScafM SNP 0001.scaffold00002 92114 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 92142 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 92274 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 92495 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 92504 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 92540 3 ... TTA scaffold3327 ScafM SNP 0001.scaffold00002 92765 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 92826 4 TATA .... scaffold3327 ScafM SNP 0001.scaffold00002 92851 1 G T scaffold3327 ReadM SNP 0001.scaffold00002 94018 1 T C - Both SNP 0001.scaffold00002 94885 1 C T scaffold3327 Both SNP 0001.scaffold00002 94894 1 A G scaffold3327 Both SNP 0001.scaffold00002 94946 1 T G scaffold3327 Both SNP 0001.scaffold00002 95015 1 A G scaffold3327 Both SNP 0001.scaffold00002 95086 1 T C scaffold3327 ReadM SNP 0001.scaffold00002 95144 1 C T - ReadM SNP 0001.scaffold00002 95161 1 A T - ScafM SNP 0001.scaffold00002 95291 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 95326 5 ..... TTAAA scaffold3327 ScafM INDEL 0001.scaffold00002 95394 8 ........ TGACCGAT scaffold3327 ScafM INDEL 0001.scaffold00002 95423 4 TTAA .... scaffold3327 ScafM SNP 0001.scaffold00002 95442 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 95470 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 95622 2 .G TT scaffold3327 ScafM SNP 0001.scaffold00002 95835 1 G A scaffold3327 Both SNP 0001.scaffold00002 95904 1 C A scaffold3327 Both SNP 0001.scaffold00002 95909 1 T C scaffold3327 Both SNP 0001.scaffold00002 95940 1 T C scaffold3327 Both SNP 0001.scaffold00002 95996 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 96083 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 96089 34 .................................. TATTCTATTTTGTCCCCTCAAAAAAAAAAAAAAA scaffold3327 ScafM SNP 0001.scaffold00002 96109 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 96157 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 96160 2 .. TT scaffold3327 ScafM SNP 0001.scaffold00002 96180 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 97318 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 97348 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 97396 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 97435 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 97443 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 97451 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 97458 1 . C scaffold3327 ScafM SNP 0001.scaffold00002 97487 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 97489 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 97506 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 97536 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 97556 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 97576 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 97686 1 A G - ReadM SNP 0001.scaffold00002 97905 1 T C - ReadM SNP 0001.scaffold00002 97958 1 C T - ReadM SNP 0001.scaffold00002 97960 1 C T - ReadM SNP 0001.scaffold00002 98010 1 A G - ReadM INDEL 0001.scaffold00002 98050 1 . A - ReadM INDEL 0001.scaffold00002 98101 1 . A - Both SNP 0001.scaffold00002 98156 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 98167 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 98192 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 98198 1 A C scaffold3327 ReadM SNP 0001.scaffold00002 98343 1 C T - ReadM SNP 0001.scaffold00002 98372 1 A G - ReadM SNP 0001.scaffold00002 98445 1 G A - ReadM SNP 0001.scaffold00002 98448 1 A C - Both SNP 0001.scaffold00002 98476 1 A G scaffold3327 Both INDEL 0001.scaffold00002 98490 1 . T scaffold3327 Both SNP 0001.scaffold00002 98639 1 C T scaffold3327 Both SNP 0001.scaffold00002 98642 1 T C scaffold3327 Both INDEL 0001.scaffold00002 98672 1 T . scaffold3327 ScafM INDEL 0001.scaffold00002 99127 10 .......... TATGACTTTT scaffold3327 ScafM SNP 0001.scaffold00002 99166 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 99178 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 99228 4 .... AGAT scaffold3327 ScafM SNP 0001.scaffold00002 99238 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 99241 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 99288 1 T . scaffold3327 ScafM SNP 0001.scaffold00002 99350 1 T C scaffold3327 Both SNP 0001.scaffold00002 99389 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 99412 1 A T scaffold3327 ReadM SNP 0001.scaffold00002 99903 1 A C - ScafM SNP 0001.scaffold00002 100700 1 A G scaffold3327 Both SNP 0001.scaffold00002 100739 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 100792 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 100797 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 100870 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 100888 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 101401 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 101417 6 ...... ATACCT scaffold3327 ScafM INDEL 0001.scaffold00002 101419 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 101425 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 101461 7 CCCCAGA ....... scaffold3327 ReadM SNP 0001.scaffold00002 101965 1 A G - ReadM SNP 0001.scaffold00002 101976 1 T C - ReadM SNP 0001.scaffold00002 102070 1 G A - ReadM SNP 0001.scaffold00002 102092 1 T G - ReadM SNP 0001.scaffold00002 102196 1 A G - ReadM SNP 0001.scaffold00002 102208 1 G A - ReadM SNP 0001.scaffold00002 102296 1 C T - ReadM SNP 0001.scaffold00002 102307 1 A C - ReadM SNP 0001.scaffold00002 102340 1 A C - ReadM SNP 0001.scaffold00002 102433 1 G T - ReadM SNP 0001.scaffold00002 102471 1 C T - ReadM SNP 0001.scaffold00002 102484 1 A G - ReadM SNP 0001.scaffold00002 102589 1 T G - ReadM SNP 0001.scaffold00002 102665 1 A G - ReadM SNP 0001.scaffold00002 102702 1 A G - ReadM SNP 0001.scaffold00002 102758 1 C T - ReadM SNP 0001.scaffold00002 102823 1 A T - ReadM SNP 0001.scaffold00002 102864 1 G A - ReadM SNP 0001.scaffold00002 102981 1 G A - ReadM SNP 0001.scaffold00002 102999 1 T G - ReadM SNP 0001.scaffold00002 103051 1 G A - ReadM SNP 0001.scaffold00002 103121 1 A G - ReadM SNP 0001.scaffold00002 103309 1 C G - ReadM SNP 0001.scaffold00002 103313 1 G A - ReadM SNP 0001.scaffold00002 103343 1 G A - ReadM SNP 0001.scaffold00002 103533 1 G A - ReadM SNP 0001.scaffold00002 103577 1 C T - ReadM SNP 0001.scaffold00002 103618 1 A G - ReadM SNP 0001.scaffold00002 103637 1 C G - ReadM SNP 0001.scaffold00002 103657 1 C A - ReadM SNP 0001.scaffold00002 103729 1 G C - ReadM SNP 0001.scaffold00002 103818 1 A G - ReadM SNP 0001.scaffold00002 103870 1 C A - ReadM SNP 0001.scaffold00002 103940 1 A G - ReadM SNP 0001.scaffold00002 103954 1 G A - ReadM SNP 0001.scaffold00002 103986 1 A G - ReadM SNP 0001.scaffold00002 104136 1 T A - ReadM SNP 0001.scaffold00002 104146 1 C T - ReadM SNP 0001.scaffold00002 104377 1 C T - ReadM SNP 0001.scaffold00002 104408 1 G T - ReadM SNP 0001.scaffold00002 104415 1 T C - ReadM SNP 0001.scaffold00002 104439 1 T C - ReadM SNP 0001.scaffold00002 104466 1 C T - ReadM SNP 0001.scaffold00002 104548 1 T C - ReadM SNP 0001.scaffold00002 104555 1 G T - ReadM SNP 0001.scaffold00002 104613 1 A G - ReadM SNP 0001.scaffold00002 104759 1 A G - ReadM SNP 0001.scaffold00002 104763 1 C T - ReadM SNP 0001.scaffold00002 104797 1 C A - ReadM SNP 0001.scaffold00002 104813 1 G C - ReadM SNP 0001.scaffold00002 104839 1 T G - ReadM SNP 0001.scaffold00002 104895 1 A G - ReadM SNP 0001.scaffold00002 104951 1 T C - ReadM SNP 0001.scaffold00002 104956 1 T C - ReadM SNP 0001.scaffold00002 104977 1 T C - ReadM SNP 0001.scaffold00002 105114 1 G T - ReadM SNP 0001.scaffold00002 105183 1 A C - ReadM INDEL 0001.scaffold00002 105220 1 . T - ReadM SNP 0001.scaffold00002 105239 1 T C - ReadM SNP 0001.scaffold00002 105391 1 T C - ReadM SNP 0001.scaffold00002 105399 1 G A - ReadM SNP 0001.scaffold00002 105420 1 A T - ReadM SNP 0001.scaffold00002 105456 1 A G - ReadM SNP 0001.scaffold00002 105530 1 T G - ReadM SNP 0001.scaffold00002 105710 1 C T - ReadM SNP 0001.scaffold00002 105716 1 C G - ReadM SNP 0001.scaffold00002 105777 1 T C - ReadM SNP 0001.scaffold00002 105820 1 A G - ReadM SNP 0001.scaffold00002 105898 1 T C - ReadM SNP 0001.scaffold00002 105951 1 T C - ReadM SNP 0001.scaffold00002 106091 1 C A - ReadM SNP 0001.scaffold00002 106140 1 T C - ReadM SNP 0001.scaffold00002 106178 1 A G - ReadM SNP 0001.scaffold00002 106243 1 G A - ReadM SNP 0001.scaffold00002 106253 1 A G - ReadM SNP 0001.scaffold00002 106395 1 C T - ReadM SNP 0001.scaffold00002 106502 1 C G - ReadM INDEL 0001.scaffold00002 106520 1 T . - ReadM SNP 0001.scaffold00002 106526 1 A G - ReadM SNP 0001.scaffold00002 106557 1 T C - ReadM SNP 0001.scaffold00002 106635 1 G A - ReadM SNP 0001.scaffold00002 106840 1 A G - ReadM SNP 0001.scaffold00002 106854 1 T C - ReadM SNP 0001.scaffold00002 106954 1 G A - ReadM SNP 0001.scaffold00002 106972 1 A G - Both SNP 0001.scaffold00002 107012 1 G A scaffold3327 Both INDEL 0001.scaffold00002 107016 1 . T scaffold3327 Both SNP 0001.scaffold00002 107081 1 G A scaffold3327 Both SNP 0001.scaffold00002 107104 1 A T scaffold3327 ReadM SNP 0001.scaffold00002 107745 1 T A - ReadM SNP 0001.scaffold00002 107783 1 A T - ScafM SNP 0001.scaffold00002 108008 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 108011 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 108012 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 108043 1 C G scaffold3327 ReadM SNP 0001.scaffold00002 108115 1 A G - ReadM SNP 0001.scaffold00002 108132 1 T C - ReadM SNP 0001.scaffold00002 108252 1 A G - Both SNP 0001.scaffold00002 108461 1 T C scaffold3327 Both SNP 0001.scaffold00002 108572 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 108597 4 .... ATAT scaffold3327 ScafM INDEL 0001.scaffold00002 108791 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 108836 1 G A scaffold3327 Both INDEL 0001.scaffold00002 109101 2 TT .. scaffold3327 Both INDEL 0001.scaffold00002 109179 1 . G scaffold3327 Both SNP 0001.scaffold00002 109205 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 109265 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 109268 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 109276 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 109285 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 109289 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 109306 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 109345 7 ....... CAAAGTG scaffold3327 ScafM SNP 0001.scaffold00002 109350 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 109358 3 ... AGT scaffold3327 ScafM INDEL 0001.scaffold00002 109361 2 .. TA scaffold3327 ScafM SNP 0001.scaffold00002 109363 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 109364 2 .. CT scaffold3327 ScafM INDEL 0001.scaffold00002 109506 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 109530 1 T C scaffold3327 Both INDEL 0001.scaffold00002 109650 2 AA .. scaffold3327 ScafM SNP 0001.scaffold00002 109777 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 109782 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 109788 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 109820 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 109909 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 109913 2 .. AA scaffold3327 ScafM SNP 0001.scaffold00002 109999 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 110035 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 110064 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 110376 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 110380 4 AAGC .... scaffold3327 ScafM INDEL 0001.scaffold00002 110400 2 TG .. scaffold3327 ScafM SNP 0001.scaffold00002 110405 1 A G scaffold3327 Both INDEL 0001.scaffold00002 110431 1 . C scaffold3327 Both INDEL 0001.scaffold00002 110536 1 . T scaffold3327 Both SNP 0001.scaffold00002 110607 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 110810 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 110826 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 110849 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 110901 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 110903 5 ..... TTTTT scaffold3327 ScafM SNP 0001.scaffold00002 110907 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 110920 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 110979 1 . A scaffold3327 ScafM INDEL 0001.scaffold00002 110982 10 .......... TTTAAATTTA scaffold3327 ScafM INDEL 0001.scaffold00002 110987 1 . G scaffold3327 ScafM SNP 0001.scaffold00002 111015 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 111055 2 AG GA scaffold3327 ScafM INDEL 0001.scaffold00002 111101 6 ...... ATTAAA scaffold3327 ScafM SNP 0001.scaffold00002 111110 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 111116 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 111128 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 111139 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 111153 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 111159 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 111172 1 . G scaffold3327 ScafM INDEL 0001.scaffold00002 111174 4 .... GCAA scaffold3327 ScafM SNP 0001.scaffold00002 111178 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 111193 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 111506 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 111534 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 111584 2 CC AG scaffold3327 ScafM INDEL 0001.scaffold00002 111588 1 . A scaffold3327 ScafM INDEL 0001.scaffold00002 111590 2 .. CG scaffold3327 ScafM SNP 0001.scaffold00002 111592 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 111593 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 111600 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 111615 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 111641 3 ... ATT scaffold3327 ScafM SNP 0001.scaffold00002 111647 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 111651 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 111657 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 111668 2 CA TG scaffold3327 ScafM SNP 0001.scaffold00002 111683 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 112014 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 112031 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 112070 22 GATTGATTTTATTTTATTGTAC ...................... scaffold3327 ScafM SNP 0001.scaffold00002 112115 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 112119 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 112137 4 TGTT .... scaffold3327 ScafM INDEL 0001.scaffold00002 112145 4 GTGA .... scaffold3327 ScafM INDEL 0001.scaffold00002 112153 12 TCTAATAAATGT ............ scaffold3327 ScafM INDEL 0001.scaffold00002 112166 6 TTTATT ...... scaffold3327 ScafM INDEL 0001.scaffold00002 112173 1 T . scaffold3327 ScafM SNP 0001.scaffold00002 112193 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 112197 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 112201 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 112259 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 112266 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 112326 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 112457 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 112507 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 112527 1 . A scaffold3327 ScafM INDEL 0001.scaffold00002 112530 1 T . scaffold3327 ScafM INDEL 0001.scaffold00002 112618 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 112693 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 112701 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 112703 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 112705 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 112708 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 112746 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 112748 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 112750 2 CT .. scaffold3327 ScafM SNP 0001.scaffold00002 112753 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 112756 1 A . scaffold3327 ScafM SNP 0001.scaffold00002 113182 2 TA CC scaffold3327 ScafM SNP 0001.scaffold00002 113192 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 113203 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 113370 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 113378 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 113426 19 TTAGTTTATCTTAAATGTA ................... scaffold3327 ScafM SNP 0001.scaffold00002 113618 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 113812 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 113948 1 T A scaffold3327 Both SNP 0001.scaffold00002 114299 1 G T scaffold3327 Both SNP 0001.scaffold00002 114367 1 T A scaffold3327 Both INDEL 0001.scaffold00002 114529 1 . T scaffold3327 ScafM INDEL 0001.scaffold00002 114581 2 CA .. scaffold3327 ScafM SNP 0001.scaffold00002 114592 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 114607 1 T C scaffold3327 ReadM SNP 0001.scaffold00002 114684 1 G A - ReadM SNP 0001.scaffold00002 114721 1 C T - ReadM SNP 0001.scaffold00002 114780 1 C G - Both SNP 0001.scaffold00002 114807 1 T A scaffold3327 Both SNP 0001.scaffold00002 114875 1 C T scaffold3327 Both SNP 0001.scaffold00002 114878 1 T G scaffold3327 ReadM SNP 0001.scaffold00002 114909 1 A G - ReadM SNP 0001.scaffold00002 115163 1 G A - Both SNP 0001.scaffold00002 115221 1 G A scaffold3327 Both SNP 0001.scaffold00002 115320 1 C A scaffold3327 ReadM SNP 0001.scaffold00002 115441 1 A C - ReadM SNP 0001.scaffold00002 115482 1 C T - ReadM SNP 0001.scaffold00002 115560 1 A G - ReadM SNP 0001.scaffold00002 115640 1 C T - Both SNP 0001.scaffold00002 115809 1 C A scaffold3327 Both SNP 0001.scaffold00002 115864 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 116117 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 116135 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 116161 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 116212 6 TGTTTT ...... scaffold3327 ScafM SNP 0001.scaffold00002 116220 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 116266 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 116316 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 116320 1 A C scaffold3327 ReadM SNP 0001.scaffold00002 116471 1 T C - Both SNP 0001.scaffold00002 116511 1 C A scaffold3327 ReadM SNP 0001.scaffold00002 116645 1 C T - ReadM SNP 0001.scaffold00002 116705 1 A G - ReadM SNP 0001.scaffold00002 116710 1 C T - ReadM SNP 0001.scaffold00002 116853 1 T G - ReadM SNP 0001.scaffold00002 116882 1 A T - Both SNP 0001.scaffold00002 117004 1 A C scaffold3327 Both SNP 0001.scaffold00002 117006 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 117100 1 C G - Both SNP 0001.scaffold00002 117203 1 A C scaffold3327 ReadM SNP 0001.scaffold00002 117368 1 C T - ReadM SNP 0001.scaffold00002 117400 1 G T - ReadM SNP 0001.scaffold00002 117408 1 A T - ReadM SNP 0001.scaffold00002 117504 1 A C - Both SNP 0001.scaffold00002 117549 1 A G scaffold3327 Both SNP 0001.scaffold00002 117571 1 T C scaffold3327 Both SNP 0001.scaffold00002 117580 1 G A scaffold3327 ReadM SNP 0001.scaffold00002 117910 1 G A - ReadM SNP 0001.scaffold00002 117944 1 G T - ReadM INDEL 0001.scaffold00002 117962 1 . A - Both SNP 0001.scaffold00002 118219 1 C T scaffold3327 Both SNP 0001.scaffold00002 118507 1 A C scaffold3327 ReadM SNP 0001.scaffold00002 118738 1 C T - ReadM SNP 0001.scaffold00002 118754 1 T C - ReadM SNP 0001.scaffold00002 118813 1 T C - ReadM SNP 0001.scaffold00002 118818 1 G A - Both SNP 0001.scaffold00002 118980 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 119539 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 119642 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 119663 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 119759 3 ... AAA scaffold3327 ScafM INDEL 0001.scaffold00002 119811 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 120095 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 120152 1 C T scaffold3327 Both SNP 0001.scaffold00002 120206 1 T A scaffold3327 Both SNP 0001.scaffold00002 120282 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 120351 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 120352 1 . T scaffold3327 ScafM INDEL 0001.scaffold00002 120370 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 120375 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 120400 3 ATT ... scaffold3327 Both SNP 0001.scaffold00002 120551 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 120685 5 ..... CGATC scaffold3327 ScafM INDEL 0001.scaffold00002 120725 5 ..... TAATT scaffold3327 ScafM INDEL 0001.scaffold00002 120769 8 ........ TACTGGTC scaffold3327 ScafM INDEL 0001.scaffold00002 120774 3 ... GTT scaffold3327 ScafM SNP 0001.scaffold00002 120778 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 120812 2 TT CG scaffold3327 ScafM SNP 0001.scaffold00002 120820 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 120831 1 . G scaffold3327 Both SNP 0001.scaffold00002 120967 1 T C scaffold3327 Both INDEL 0001.scaffold00002 121041 3 ATC ... scaffold3327 ScafM SNP 0001.scaffold00002 121079 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 121089 4 .... TTAA scaffold3327 ScafM SNP 0001.scaffold00002 121104 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 121119 5 ..... CGATC scaffold3327 ScafM SNP 0001.scaffold00002 121121 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 121122 3 ... TAA scaffold3327 ScafM SNP 0001.scaffold00002 121193 2 AA GT scaffold3327 ScafM SNP 0001.scaffold00002 121200 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 121233 9 .....AGGG TCCCCTTCC scaffold3327 ScafM INDEL 0001.scaffold00002 121280 2 GA .. scaffold3327 ScafM INDEL 0001.scaffold00002 121321 13 CAAACCCGATATG ............. scaffold3327 ScafM INDEL 0001.scaffold00002 121336 3 ATA ... scaffold3327 ScafM INDEL 0001.scaffold00002 121381 3 ... ACT scaffold3327 ScafM SNP 0001.scaffold00002 121383 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 121404 1 A C scaffold3327 Both SNP 0001.scaffold00002 121416 1 C T scaffold3327 Both SNP 0001.scaffold00002 121545 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 121576 2 TG GA scaffold3327 ScafM SNP 0001.scaffold00002 121579 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 121582 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 121584 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 121690 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 121705 5 GTTAC ..... scaffold3327 ScafM SNP 0001.scaffold00002 121799 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 121827 2 TG .. scaffold3327 ScafM SNP 0001.scaffold00002 121845 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 121851 1 . G scaffold3327 ScafM INDEL 0001.scaffold00002 121858 5 ..... GTGAT scaffold3327 ScafM INDEL 0001.scaffold00002 121863 5 ..... TTGCC scaffold3327 ScafM SNP 0001.scaffold00002 121865 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 121867 3 ... TAA scaffold3327 ScafM INDEL 0001.scaffold00002 121868 3 ... TCT scaffold3327 ScafM INDEL 0001.scaffold00002 121871 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 121885 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 121893 1 G . scaffold3327 ScafM SNP 0001.scaffold00002 121918 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 121928 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 121938 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 121952 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 121992 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 122000 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 122033 2 CC TG scaffold3327 ScafM SNP 0001.scaffold00002 122067 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 122911 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 122917 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 122958 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 122982 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 123014 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 123044 4 .... TATA scaffold3327 ScafM SNP 0001.scaffold00002 123105 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 123119 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 123184 1 G . scaffold3327 ScafM SNP 0001.scaffold00002 123238 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 127389 1 G C scaffold2549 ScafM INDEL 0001.scaffold00002 127416 1 G . scaffold2549 ScafM SNP 0001.scaffold00002 127473 1 A C scaffold2549 ScafM SNP 0001.scaffold00002 127484 1 G T scaffold2549 ScafM SNP 0001.scaffold00002 129749 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 129772 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 129777 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 129811 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 129825 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 129831 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 129846 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 129900 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 129908 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 129920 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 129922 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 129949 3 TAA ... scaffold3327 ScafM SNP 0001.scaffold00002 129988 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 129991 1 G A scaffold3327 Both INDEL 0001.scaffold00002 130107 1 . G scaffold3327 ScafM SNP 0001.scaffold00002 130190 1 A C scaffold3327 Both SNP 0001.scaffold00002 130222 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 130255 1 A G scaffold3327 Both SNP 0001.scaffold00002 130268 1 T C scaffold3327 ReadM SNP 0001.scaffold00002 130643 1 C G - ReadM SNP 0001.scaffold00002 130674 1 T G - ScafM SNP 0001.scaffold00002 131607 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 131610 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 131646 3 AAA ... scaffold3327 ScafM SNP 0001.scaffold00002 131665 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 131721 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 131738 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 131764 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 131814 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 131819 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 131876 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 131901 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 131966 1 G A scaffold3327 Both SNP 0001.scaffold00002 132057 1 T C scaffold3327 Both SNP 0001.scaffold00002 132063 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 132080 1 G C scaffold3327 Both SNP 0001.scaffold00002 132144 1 C A scaffold3327 Both SNP 0001.scaffold00002 132195 1 A G scaffold3327 Both SNP 0001.scaffold00002 132280 1 G A scaffold3327 Both SNP 0001.scaffold00002 132298 1 T A scaffold3327 Both SNP 0001.scaffold00002 132309 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 132462 4 TTAC .... scaffold3327 ScafM SNP 0001.scaffold00002 132491 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 132517 1 A T scaffold3327 Both SNP 0001.scaffold00002 132563 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 132582 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 132598 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 132635 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 132643 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 132658 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 132690 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 132706 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 132716 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 132719 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 132721 1 A G scaffold3327 Both SNP 0001.scaffold00002 132747 1 G A scaffold3327 Both SNP 0001.scaffold00002 132767 1 G T scaffold3327 Both SNP 0001.scaffold00002 132789 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 132855 4 .... GATT scaffold3327 Both SNP 0001.scaffold00002 132878 1 G C scaffold3327 ReadM SNP 0001.scaffold00002 132956 1 C T - ReadM SNP 0001.scaffold00002 132964 1 C G - ReadM SNP 0001.scaffold00002 132967 1 T C - ReadM SNP 0001.scaffold00002 133048 1 C T - ReadM SNP 0001.scaffold00002 133123 1 A G - ReadM SNP 0001.scaffold00002 133187 1 A G - ReadM SNP 0001.scaffold00002 133296 1 G A - ReadM SNP 0001.scaffold00002 133355 1 T C - ReadM SNP 0001.scaffold00002 133371 1 T A - ReadM SNP 0001.scaffold00002 133380 1 T C - ReadM SNP 0001.scaffold00002 133477 1 G A - ReadM SNP 0001.scaffold00002 133636 1 G C - ReadM SNP 0001.scaffold00002 133738 1 T C - ReadM SNP 0001.scaffold00002 133849 1 C T - ReadM SNP 0001.scaffold00002 133897 1 G A - ReadM SNP 0001.scaffold00002 133908 1 A G - ReadM SNP 0001.scaffold00002 135713 1 C G - Both SNP 0001.scaffold00002 135921 1 C G scaffold3327 Both SNP 0001.scaffold00002 136060 1 C G scaffold3327 ReadM SNP 0001.scaffold00002 136148 1 T C - ReadM SNP 0001.scaffold00002 136238 1 T C - ReadM SNP 0001.scaffold00002 136241 1 G A - ReadM SNP 0001.scaffold00002 136268 1 G C - ReadM SNP 0001.scaffold00002 136310 1 A G - ReadM SNP 0001.scaffold00002 136335 1 A G - ReadM SNP 0001.scaffold00002 136413 1 A G - ReadM SNP 0001.scaffold00002 136478 1 T A - ReadM SNP 0001.scaffold00002 136552 1 C T - ReadM SNP 0001.scaffold00002 136618 1 C G - ReadM SNP 0001.scaffold00002 136687 1 G A - ReadM SNP 0001.scaffold00002 136737 1 G A - ReadM SNP 0001.scaffold00002 136765 1 G T - ReadM SNP 0001.scaffold00002 136804 1 T C - ReadM SNP 0001.scaffold00002 136811 1 A G - ReadM SNP 0001.scaffold00002 136956 1 G A - ReadM SNP 0001.scaffold00002 136973 1 T C - ReadM SNP 0001.scaffold00002 136982 1 A G - ReadM SNP 0001.scaffold00002 137022 1 C T - Both SNP 0001.scaffold00002 137059 1 A T scaffold3327 Both SNP 0001.scaffold00002 137203 1 T C scaffold3327 Both SNP 0001.scaffold00002 137275 1 T C scaffold3327 Both SNP 0001.scaffold00002 137286 1 T G scaffold3327 Both SNP 0001.scaffold00002 137325 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 137400 3 TCA ... scaffold3327 ScafM SNP 0001.scaffold00002 137413 1 C T scaffold3327 Both SNP 0001.scaffold00002 137521 1 G A scaffold3327 Both SNP 0001.scaffold00002 137681 1 G A scaffold3327 Both INDEL 0001.scaffold00002 137690 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 137714 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 137844 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 138219 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 138298 1 T C scaffold3327 Both SNP 0001.scaffold00002 138648 1 A G scaffold3327 Both SNP 0001.scaffold00002 138754 1 A C scaffold3327 Both INDEL 0001.scaffold00002 138763 2 .. GC scaffold3327 Both SNP 0001.scaffold00002 138847 1 G A scaffold3327 Both SNP 0001.scaffold00002 138935 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 139139 3 TAT ... scaffold3327 Both SNP 0001.scaffold00002 139199 1 A G scaffold3327 Both SNP 0001.scaffold00002 139206 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 139261 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 139280 9 ......... ACTGTCTAC scaffold3327 ScafM SNP 0001.scaffold00002 139398 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 139424 1 A G scaffold3327 ScafM INDEL 0001.scaffold00002 139436 1 T . scaffold3327 ScafM SNP 0001.scaffold00002 139526 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 139551 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 140031 1 C T - ScafM SNP 0001.scaffold00002 140769 1 T C scaffold3327 Both SNP 0001.scaffold00002 140872 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 140930 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 141009 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 141054 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 141065 2 GG AA scaffold3327 ScafM SNP 0001.scaffold00002 141086 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 141400 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 141518 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 141570 1 A G - ReadM SNP 0001.scaffold00002 141583 1 G A - ReadM SNP 0001.scaffold00002 141687 1 G A - ReadM INDEL 0001.scaffold00002 141701 1 T . - Both SNP 0001.scaffold00002 141853 1 G A scaffold3327 Both SNP 0001.scaffold00002 141868 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 141994 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 142069 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 142412 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 142420 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 142507 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 142520 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 142558 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 142600 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 142630 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 142637 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 142756 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 142802 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 142856 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 142939 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 142988 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 143007 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 143016 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 143026 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 143029 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 143089 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 143094 7 ....... TTGCAAG scaffold3327 ScafM SNP 0001.scaffold00002 143134 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 143138 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 143158 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 143162 1 C G scaffold3327 Both SNP 0001.scaffold00002 143237 1 C T scaffold3327 Both SNP 0001.scaffold00002 143242 1 G C scaffold3327 Both SNP 0001.scaffold00002 143301 1 C T scaffold3327 Both INDEL 0001.scaffold00002 143356 1 C . scaffold3327 Both SNP 0001.scaffold00002 143439 1 T A scaffold3327 Both SNP 0001.scaffold00002 143505 1 C T scaffold3327 Both INDEL 0001.scaffold00002 143698 1 G . scaffold3327 Both SNP 0001.scaffold00002 143752 1 G A scaffold3327 ReadM INDEL 0001.scaffold00002 143974 1 T . - ReadM INDEL 0001.scaffold00002 144015 1 T . - Both SNP 0001.scaffold00002 144130 1 G C scaffold3327 Both SNP 0001.scaffold00002 144185 1 C T scaffold3327 Both INDEL 0001.scaffold00002 144327 1 . A scaffold3327 ReadM SNP 0001.scaffold00002 144527 1 T C - Both INDEL 0001.scaffold00002 144582 1 G . scaffold3327 Both SNP 0001.scaffold00002 144594 1 A G scaffold3327 Both SNP 0001.scaffold00002 144696 1 T C scaffold3327 Both SNP 0001.scaffold00002 144713 1 T G scaffold3327 Both SNP 0001.scaffold00002 144720 1 C A scaffold3327 Both SNP 0001.scaffold00002 144759 1 A C scaffold3327 Both SNP 0001.scaffold00002 144769 1 A T scaffold3327 Both SNP 0001.scaffold00002 144835 1 C T scaffold3327 Both SNP 0001.scaffold00002 144936 1 T A scaffold3327 Both SNP 0001.scaffold00002 144982 1 C T scaffold3327 Both SNP 0001.scaffold00002 145018 1 A T scaffold3327 Both SNP 0001.scaffold00002 145219 1 G A scaffold3327 Both SNP 0001.scaffold00002 145243 1 G A scaffold3327 Both SNP 0001.scaffold00002 145265 1 T A scaffold3327 Both SNP 0001.scaffold00002 145297 1 A G scaffold3327 Both SNP 0001.scaffold00002 145402 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 145457 4 .... CAAT scaffold3327 ScafM SNP 0001.scaffold00002 145465 1 C T scaffold3327 Both SNP 0001.scaffold00002 145490 1 C T scaffold3327 Both SNP 0001.scaffold00002 145582 1 C G scaffold3327 Both SNP 0001.scaffold00002 145612 1 C T scaffold3327 Both SNP 0001.scaffold00002 145772 1 T C scaffold3327 Both SNP 0001.scaffold00002 145854 1 C T scaffold3327 Both INDEL 0001.scaffold00002 145864 1 . T scaffold3327 Both SNP 0001.scaffold00002 146085 1 T C scaffold3327 Both SNP 0001.scaffold00002 146124 1 C G scaffold3327 Both SNP 0001.scaffold00002 146367 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 146592 5 ....C TGTTT scaffold3327 Both SNP 0001.scaffold00002 146600 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 147477 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 147514 4 .... GTGA scaffold3327 ScafM SNP 0001.scaffold00002 147534 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 147547 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 147600 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 147607 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 147622 1 T A scaffold3327 ScafM INDEL 0001.scaffold00002 147639 5 ACCCA ...TG scaffold3327 ScafM INDEL 0001.scaffold00002 147673 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 147675 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 147683 1 C G scaffold3327 ScafM INDEL 0001.scaffold00002 147690 1 A . scaffold3327 ReadM SNP 0001.scaffold00002 147847 1 T C - ScafM SNP 0001.scaffold00002 148014 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 148022 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 148051 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 148065 1 T G scaffold3327 ScafM INDEL 0001.scaffold00002 148069 3 TAG ... scaffold3327 ScafM INDEL 0001.scaffold00002 148076 4 TTTT ...G scaffold3327 ScafM INDEL 0001.scaffold00002 148083 1 C . scaffold3327 ScafM INDEL 0001.scaffold00002 148085 1 T . scaffold3327 ScafM INDEL 0001.scaffold00002 148087 4 TTTT .... scaffold3327 ReadM SNP 0001.scaffold00002 148179 1 T C - ReadM SNP 0001.scaffold00002 148207 1 A G - ReadM SNP 0001.scaffold00002 148244 1 G A - ReadM SNP 0001.scaffold00002 148277 1 G A - ScafM SNP 0001.scaffold00002 148408 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 148419 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 148426 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 148452 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 148461 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 148472 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 148530 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 148533 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 148562 1 G T scaffold3327 ScafM INDEL 0001.scaffold00002 148603 7 ....... TTCCCAA scaffold3327 ScafM SNP 0001.scaffold00002 148625 1 G A scaffold3327 Both SNP 0001.scaffold00002 148943 1 G A scaffold2233 ScafM SNP 0001.scaffold00002 148983 1 T C scaffold2233 ScafM SNP 0001.scaffold00002 149130 1 G A scaffold2468 ScafM SNP 0001.scaffold00002 149168 1 A G scaffold2468 ScafM SNP 0001.scaffold00002 149175 1 T C scaffold2468 ScafM SNP 0001.scaffold00002 149205 1 A G scaffold2468 ScafM SNP 0001.scaffold00002 149321 2 AT GA scaffold1875 ScafM SNP 0001.scaffold00002 149327 1 G A scaffold1875 ScafM SNP 0001.scaffold00002 149330 1 C G scaffold1875 ScafM SNP 0001.scaffold00002 149359 1 T C scaffold1875 ScafM SNP 0001.scaffold00002 149370 1 A G scaffold1875 ScafM INDEL 0001.scaffold00002 149456 1 . A scaffold1875 ScafM SNP 0001.scaffold00002 149508 1 G A scaffold1875 ScafM SNP 0001.scaffold00002 149551 1 A G scaffold1875 ScafM SNP 0001.scaffold00002 149554 1 T C scaffold1875 ScafM INDEL 0001.scaffold00002 149564 1 G . scaffold1875 ScafM INDEL 0001.scaffold00002 149572 1 . A scaffold1875 ScafM SNP 0001.scaffold00002 149586 1 A G scaffold1875 ScafM SNP 0001.scaffold00002 149596 1 T C scaffold1875 ScafM SNP 0001.scaffold00002 149602 1 C G scaffold1875 ScafM SNP 0001.scaffold00002 149604 1 T G scaffold1875 ScafM INDEL 0001.scaffold00002 149607 1 A . scaffold1875 ScafM INDEL 0001.scaffold00002 149785 1 T . scaffold3327 ScafM SNP 0001.scaffold00002 149817 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 149933 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 149970 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 149987 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 150014 2 TT AA scaffold3327 ScafM SNP 0001.scaffold00002 150085 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 150114 2 TT AG scaffold3327 ScafM SNP 0001.scaffold00002 150121 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 150141 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 150343 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 150408 1 T C scaffold3327 ReadM SNP 0001.scaffold00002 150553 1 A G - ScafM SNP 0001.scaffold00002 150967 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 150993 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151074 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 151091 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 151119 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151139 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151156 2 GC AG scaffold3327 ScafM SNP 0001.scaffold00002 151186 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 151189 3 ... GAT scaffold3327 ScafM SNP 0001.scaffold00002 151194 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 151199 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 151217 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151223 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 151229 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 151231 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 151247 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151262 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 151271 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 151287 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 151296 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 151331 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 151352 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151358 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151397 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151421 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151423 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151477 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151485 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151514 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 151531 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 151540 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 151569 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 151571 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 151594 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 151601 1 A G scaffold3327 Both SNP 0001.scaffold00002 151627 1 A G scaffold3327 Both SNP 0001.scaffold00002 151630 1 G A scaffold3327 Both SNP 0001.scaffold00002 151667 1 T C scaffold3327 Both SNP 0001.scaffold00002 151735 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 151780 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 151800 1 T C scaffold3327 Both SNP 0001.scaffold00002 151827 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 151851 1 A C scaffold3327 Both SNP 0001.scaffold00002 151881 1 C A scaffold3327 Both SNP 0001.scaffold00002 151978 1 C T scaffold3327 Both SNP 0001.scaffold00002 151994 1 G A scaffold3327 Both SNP 0001.scaffold00002 152033 1 T G scaffold3327 Both SNP 0001.scaffold00002 152074 1 A G scaffold3327 Both SNP 0001.scaffold00002 152199 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 152210 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 152212 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 152239 40 ........................................ TTATGGTGGACCCAGGGGCCACCCATAATTTTATCTCTAC scaffold3327 ScafM INDEL 0001.scaffold00002 152241 2 .. AA scaffold3327 ScafM INDEL 0001.scaffold00002 152245 14 .............. TGCAGAGGTTACAA scaffold3327 ScafM SNP 0001.scaffold00002 152250 1 C T scaffold3327 Both SNP 0001.scaffold00002 152296 1 A G scaffold3327 Both SNP 0001.scaffold00002 152317 1 G C scaffold3327 ScafM INDEL 0001.scaffold00002 152441 3 ... TAA scaffold3327 ScafM SNP 0001.scaffold00002 152458 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 152461 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 152473 1 G . scaffold3327 ScafM SNP 0001.scaffold00002 152478 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 152520 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 152524 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 152547 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 152578 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 152594 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 152605 2 TG CA scaffold3327 ScafM SNP 0001.scaffold00002 152615 2 AG GT scaffold3327 ScafM SNP 0001.scaffold00002 152629 1 G T scaffold3327 Both SNP 0001.scaffold00002 152656 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 152702 1 C T - ReadM SNP 0001.scaffold00002 152732 1 C T - ReadM SNP 0001.scaffold00002 152778 1 A C - ReadM SNP 0001.scaffold00002 152807 1 C T - ReadM SNP 0001.scaffold00002 153125 1 T C - ReadM SNP 0001.scaffold00002 153143 1 A G - Both SNP 0001.scaffold00002 153263 1 A G scaffold3327 Both INDEL 0001.scaffold00002 153319 1 A . scaffold3327 Both SNP 0001.scaffold00002 153381 1 G C scaffold3327 Both SNP 0001.scaffold00002 153473 1 A G scaffold3327 Both SNP 0001.scaffold00002 153519 1 C A scaffold3327 Both SNP 0001.scaffold00002 153529 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153551 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153555 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 153559 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 153574 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 153579 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 153584 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153651 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 153666 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 153677 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153696 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153701 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 153711 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 153776 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 153786 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 153795 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 153813 2 GT AG scaffold3327 Both SNP 0001.scaffold00002 153940 1 A G scaffold3327 Both SNP 0001.scaffold00002 153944 1 C T scaffold3327 Both SNP 0001.scaffold00002 153965 1 T C scaffold3327 ReadM INDEL 0001.scaffold00002 154028 1 A . - ScafM INDEL 0001.scaffold00002 154028 2 AG .T scaffold3327 Both SNP 0001.scaffold00002 154070 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 154082 4 ACAT .... scaffold3327 Both SNP 0001.scaffold00002 154134 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 154150 1 T A scaffold3327 ReadM SNP 0001.scaffold00002 154307 1 A G - ReadM SNP 0001.scaffold00002 154359 1 A G - ReadM SNP 0001.scaffold00002 154392 1 T A - ReadM SNP 0001.scaffold00002 154401 1 T C - ReadM SNP 0001.scaffold00002 154445 1 A T - ReadM SNP 0001.scaffold00002 154461 1 T C - ReadM SNP 0001.scaffold00002 154464 1 G A - ReadM SNP 0001.scaffold00002 154611 1 T C - ScafM SNP 0001.scaffold00002 154911 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 154930 1 G A scaffold3327 Both SNP 0001.scaffold00002 154948 1 A C scaffold3327 Both SNP 0001.scaffold00002 154988 1 G T scaffold3327 Both SNP 0001.scaffold00002 155019 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155060 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 155070 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155077 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 155079 1 C G scaffold3327 ScafM SNP 0001.scaffold00002 155082 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155102 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 155141 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 155158 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 155160 1 C A scaffold3327 Both SNP 0001.scaffold00002 155221 1 A C scaffold3327 Both SNP 0001.scaffold00002 155272 1 G A scaffold3327 Both SNP 0001.scaffold00002 155290 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155312 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 155319 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155505 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155510 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155523 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155558 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155566 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 155594 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155649 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 155652 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 155658 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 155669 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 155690 2 TG CA scaffold3327 ScafM SNP 0001.scaffold00002 155693 1 A T scaffold3327 ReadM INDEL 0001.scaffold00002 155758 1 G . - ScafM SNP 0001.scaffold00002 155857 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 155888 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155922 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155932 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 155943 2 AC GT scaffold3327 ScafM SNP 0001.scaffold00002 155946 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 155952 1 T C scaffold3327 ScafM INDEL 0001.scaffold00002 155967 1 . A scaffold3327 ScafM SNP 0001.scaffold00002 155991 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 156015 2 TT CC scaffold3327 ScafM SNP 0001.scaffold00002 156045 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 156344 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 156362 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 156367 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 156385 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 156427 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 156451 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 156456 1 A C scaffold3327 ScafM INDEL 0001.scaffold00002 156472 2 .G AA scaffold3327 ScafM SNP 0001.scaffold00002 156507 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 156579 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 156590 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 156595 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 156599 2 CC TT scaffold3327 ScafM SNP 0001.scaffold00002 156612 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 156669 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 156684 7 ....... AATTTAG scaffold3327 ScafM INDEL 0001.scaffold00002 156687 2 .. AC scaffold3327 ScafM INDEL 0001.scaffold00002 156688 10 .......... AAAAAACTAA scaffold3327 ScafM INDEL 0001.scaffold00002 156690 4 .... GGGG scaffold3327 ScafM SNP 0001.scaffold00002 156693 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 156726 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 156792 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 156810 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 156821 1 A T scaffold3327 ScafM SNP 0001.scaffold00002 156827 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 156846 1 G C scaffold3327 ScafM SNP 0001.scaffold00002 156854 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 156865 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 156867 1 T G scaffold3327 ScafM SNP 0001.scaffold00002 156896 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 156937 1 C T scaffold3327 ScafM INDEL 0001.scaffold00002 156940 1 C . scaffold3327 ScafM SNP 0001.scaffold00002 156976 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 157011 1 G T scaffold3327 ScafM SNP 0001.scaffold00002 161439 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 161457 2 TT AG scaffold3327 ScafM SNP 0001.scaffold00002 161480 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 161507 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 161549 1 C A scaffold3327 ScafM SNP 0001.scaffold00002 161555 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 161590 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 161598 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 161605 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 161634 1 C A scaffold3327 ScafM INDEL 0001.scaffold00002 161670 1 . T scaffold3327 ScafM SNP 0001.scaffold00002 161683 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 161703 1 G A scaffold3327 ScafM INDEL 0001.scaffold00002 161746 16 ATTAACCATGGCCCAA ................ scaffold3327 ScafM INDEL 0001.scaffold00002 161776 12 CATGGACCCTGC ............ scaffold3327 ScafM SNP 0001.scaffold00002 161799 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 161816 2 CA TG scaffold3327 ScafM INDEL 0001.scaffold00002 161837 7 CGACCAG ....... scaffold3327 ScafM INDEL 0001.scaffold00002 161845 5 TTCTT ..... scaffold3327 ScafM INDEL 0001.scaffold00002 161855 8 GGTTTCAT ........ scaffold3327 ScafM INDEL 0001.scaffold00002 161865 6 CCGGGT ...... scaffold3327 ScafM INDEL 0001.scaffold00002 161874 12 CTGACCCGGTTT ............ scaffold3327 ScafM INDEL 0001.scaffold00002 161921 3 ... CCG scaffold3327 ScafM SNP 0001.scaffold00002 161947 2 CT TG scaffold3327 Both INDEL 0001.scaffold00002 162005 1 . C scaffold3327 Both SNP 0001.scaffold00002 162033 1 G T scaffold3327 Both SNP 0001.scaffold00002 162047 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 162100 1 A T scaffold3327 ScafM INDEL 0001.scaffold00002 162105 1 . G scaffold3327 Both SNP 0001.scaffold00002 162134 1 C T scaffold3327 Both SNP 0001.scaffold00002 162142 1 T A scaffold3327 Both SNP 0001.scaffold00002 162179 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 162224 1 G A scaffold3327 Both SNP 0001.scaffold00002 162233 1 G T scaffold3327 Both SNP 0001.scaffold00002 162260 1 A G scaffold3327 ReadM SNP 0001.scaffold00002 162359 1 A G - ReadM SNP 0001.scaffold00002 162398 1 T C - ReadM SNP 0001.scaffold00002 162400 1 T C - ReadM SNP 0001.scaffold00002 162429 1 A G - ReadM SNP 0001.scaffold00002 162505 1 G A - ReadM INDEL 0001.scaffold00002 162522 1 G . - ReadM SNP 0001.scaffold00002 162759 1 G A - ReadM SNP 0001.scaffold00002 162808 1 T A - ScafM SNP 0001.scaffold00002 167119 1 T C scaffold835 ScafM SNP 0001.scaffold00002 167143 1 C T scaffold835 ScafM SNP 0001.scaffold00002 167147 1 G C scaffold835 ScafM SNP 0001.scaffold00002 167285 1 G A scaffold835 ScafM SNP 0001.scaffold00002 167327 2 TC CT scaffold835 ScafM SNP 0001.scaffold00002 167330 1 C T scaffold835 ScafM SNP 0001.scaffold00002 167339 1 A G scaffold835 ScafM SNP 0001.scaffold00002 167361 1 T A scaffold835 ScafM SNP 0001.scaffold00002 167370 1 C T scaffold835 ScafM SNP 0001.scaffold00002 167372 1 C T scaffold835 ScafM SNP 0001.scaffold00002 167422 1 A C scaffold835 ReadM SNP 0001.scaffold00002 168064 1 G T - ReadM SNP 0001.scaffold00002 168105 1 T C - ScafM SNP 0001.scaffold00002 170268 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 170513 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 170549 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 170571 1 A G scaffold3327 ScafM SNP 0001.scaffold00002 170583 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 170601 1 T C scaffold3327 ScafM SNP 0001.scaffold00002 170615 1 C T scaffold3327 ScafM SNP 0001.scaffold00002 170617 1 A C scaffold3327 ScafM SNP 0001.scaffold00002 170622 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 170632 1 T A scaffold3327 ScafM SNP 0001.scaffold00002 170637 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 170656 1 G A scaffold3327 ScafM SNP 0001.scaffold00002 170739 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 170772 1 G T scaffold12289 ReadM SNP 0001.scaffold00002 171323 1 C T - ReadM SNP 0001.scaffold00002 171411 1 G T - ReadM SNP 0001.scaffold00002 171438 1 A G - Both SNP 0001.scaffold00002 171480 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 171506 1 C G scaffold12289 ScafM SNP 0001.scaffold00002 171527 1 T C scaffold12289 ScafM SNP 0001.scaffold00002 171536 1 C T scaffold12289 ScafM SNP 0001.scaffold00002 171543 2 AT TG scaffold12289 ScafM SNP 0001.scaffold00002 171562 1 T C scaffold12289 ScafM SNP 0001.scaffold00002 171566 1 C T scaffold12289 ScafM SNP 0001.scaffold00002 171580 1 G A scaffold12289 ScafM SNP 0001.scaffold00002 171591 1 C T scaffold12289 Both SNP 0001.scaffold00002 171620 1 C T scaffold12289 Both SNP 0001.scaffold00002 171623 1 T A scaffold12289 ReadM SNP 0001.scaffold00002 171647 1 G A - ScafM SNP 0001.scaffold00002 171759 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 171778 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 171786 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 171848 1 A T scaffold12289 ScafM SNP 0001.scaffold00002 171850 1 G A scaffold12289 ScafM INDEL 0001.scaffold00002 171857 1 . C scaffold12289 ScafM SNP 0001.scaffold00002 171913 1 C T scaffold12289 ScafM SNP 0001.scaffold00002 172685 1 G A scaffold12289 ScafM SNP 0001.scaffold00002 172731 1 A G scaffold12289 ScafM INDEL 0001.scaffold00002 172744 2 .. TG scaffold12289 ScafM SNP 0001.scaffold00002 172792 1 A G scaffold12289 ScafM SNP 0001.scaffold00002 172831 1 A T scaffold12289 ScafM SNP 0001.scaffold00002 172875 1 C G scaffold12289 ScafM SNP 0001.scaffold00002 172881 1 A G scaffold12289 ScafM INDEL 0001.scaffold00002 172899 1 . A scaffold12289 ScafM SNP 0001.scaffold00002 172915 1 G A scaffold12289 ScafM SNP 0001.scaffold00002 172932 1 G A scaffold12289 ScafM SNP 0001.scaffold00002 172934 1 T C scaffold12289 ScafM SNP 0001.scaffold00002 172951 1 A G scaffold12289 Both SNP 0001.scaffold00002 173037 1 G A scaffold12289 Both SNP 0001.scaffold00002 173040 1 G A scaffold12289 Both SNP 0001.scaffold00002 173202 1 T C scaffold12289 ScafM SNP 0001.scaffold00002 173251 2 TG CA scaffold12289 Both SNP 0001.scaffold00002 173312 1 C T scaffold12289 ReadM SNP 0001.scaffold00002 173341 1 C T - ReadM INDEL 0001.scaffold00002 173364 1 . C - ReadM SNP 0001.scaffold00002 173519 1 C T - ReadM SNP 0001.scaffold00002 173580 1 T G - ScafM INDEL 0001.scaffold00002 173928 2 .. TT C13415057 ScafM SNP 0001.scaffold00002 173977 1 A G C13415057 ScafM SNP 0001.scaffold00002 173985 1 A G C13415057 ScafM SNP 0001.scaffold00002 173989 1 T C C13415057 ScafM SNP 0001.scaffold00002 173992 1 A T C13415057 ScafM SNP 0001.scaffold00002 174004 1 T C C13415057 ScafM SNP 0001.scaffold00002 174014 1 C T C13415057 ScafM INDEL 0001.scaffold00002 174051 5 ..... TTTTT C13415057 ScafM SNP 0001.scaffold00002 174058 1 T C C13415057 ScafM SNP 0001.scaffold00002 174072 1 G A C13415057 ScafM SNP 0001.scaffold00002 174090 1 A G C13415057 ScafM SNP 0001.scaffold00002 174093 1 T C C13415057 ScafM SNP 0001.scaffold00002 174118 1 A T C13415057 ScafM SNP 0001.scaffold00002 174126 1 C T C13415057 ScafM SNP 0001.scaffold00002 174131 1 A C C13415057 ScafM SNP 0001.scaffold00002 174135 1 C A C13415057 ScafM SNP 0001.scaffold00002 174179 1 C T C13415057 ScafM INDEL 0001.scaffold00002 174194 1 . A C13415057 Both SNP 0001.scaffold00002 174209 1 C A C13415057 ScafM SNP 0001.scaffold00002 174502 1 T C C13415057 ScafM SNP 0001.scaffold00002 174505 1 G T C13415057 ScafM SNP 0001.scaffold00002 174535 1 G T C13415057 ScafM INDEL 0001.scaffold00002 174564 2 .. AT C13415057 ScafM SNP 0001.scaffold00002 174627 1 C G C13415057 ScafM SNP 0001.scaffold00002 174866 1 C A C13415057 ScafM INDEL 0001.scaffold00002 174876 4 .... TTAT C13415057 ScafM SNP 0001.scaffold00002 174933 1 C T C13415057 ScafM SNP 0001.scaffold00002 176183 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 176204 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 176250 1 A G scaffold17956 ScafM INDEL 0001.scaffold00002 176258 11 ........... ATAAGAAGCCA scaffold17956 ScafM SNP 0001.scaffold00002 176267 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 176284 1 C T scaffold17956 ScafM INDEL 0001.scaffold00002 176288 1 . A scaffold17956 ScafM INDEL 0001.scaffold00002 176298 2 .. AA scaffold17956 ScafM SNP 0001.scaffold00002 176341 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 176351 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 176354 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 176377 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 176383 1 C T scaffold17956 ScafM INDEL 0001.scaffold00002 176580 1 . G scaffold17956 ScafM SNP 0001.scaffold00002 176592 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 176601 1 C G scaffold17956 ScafM SNP 0001.scaffold00002 176606 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 176609 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 176635 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 176735 1 A G scaffold17956 ScafM INDEL 0001.scaffold00002 176774 37 ..................................... AACGAACAAGTTTAGTAAAAATCAGATAAAACAAACA scaffold17956 ScafM INDEL 0001.scaffold00002 176776 5 ..... ATCTA scaffold17956 ScafM INDEL 0001.scaffold00002 176779 4 .... TCTA scaffold17956 ScafM INDEL 0001.scaffold00002 176782 4 .... TCTA scaffold17956 ScafM INDEL 0001.scaffold00002 176784 5 ..... CTTAG scaffold17956 ScafM INDEL 0001.scaffold00002 176786 5 ..... AAGGG scaffold17956 ScafM SNP 0001.scaffold00002 176800 1 C T scaffold17956 ScafM INDEL 0001.scaffold00002 176946 7 ....... TTCTCTC scaffold17956 ScafM INDEL 0001.scaffold00002 176950 2 .. TT scaffold17956 Both SNP 0001.scaffold00002 177093 1 A G scaffold17956 Both SNP 0001.scaffold00002 177299 1 C T scaffold17956 Both SNP 0001.scaffold00002 177344 1 A T scaffold17956 Both SNP 0001.scaffold00002 177391 1 A G scaffold17956 Both INDEL 0001.scaffold00002 177396 1 T . scaffold17956 ScafM INDEL 0001.scaffold00002 177482 1 . T scaffold17956 ScafM SNP 0001.scaffold00002 177485 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 177515 1 A T scaffold17956 ScafM INDEL 0001.scaffold00002 177563 7 AGTTTCT ....... scaffold17956 ScafM SNP 0001.scaffold00002 177597 1 C T scaffold17956 ScafM INDEL 0001.scaffold00002 177598 4 .... TTTT scaffold17956 ScafM SNP 0001.scaffold00002 177637 1 G A scaffold17956 Both SNP 0001.scaffold00002 177717 1 G A scaffold17956 Both SNP 0001.scaffold00002 177777 1 C T scaffold17956 Both SNP 0001.scaffold00002 177793 1 G T scaffold17956 Both SNP 0001.scaffold00002 177807 1 A T scaffold17956 ScafM SNP 0001.scaffold00002 177863 1 T C scaffold17956 Both SNP 0001.scaffold00002 178312 1 T C scaffold17956 Both SNP 0001.scaffold00002 178491 1 T C scaffold17956 Both SNP 0001.scaffold00002 178639 1 C T scaffold17956 Both SNP 0001.scaffold00002 178978 1 A C scaffold17956 Both SNP 0001.scaffold00002 178997 1 T C scaffold17956 Both SNP 0001.scaffold00002 179575 1 C T scaffold17956 Both SNP 0001.scaffold00002 179634 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 179690 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 179702 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 179717 1 T A scaffold17956 ScafM INDEL 0001.scaffold00002 179736 1 . C scaffold17956 ScafM SNP 0001.scaffold00002 179763 1 G T scaffold17956 ScafM INDEL 0001.scaffold00002 179775 5 TCATC ..... scaffold17956 ScafM SNP 0001.scaffold00002 179797 1 T G scaffold17956 Both SNP 0001.scaffold00002 179883 1 G C scaffold17956 ScafM SNP 0001.scaffold00002 179921 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 179936 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 179943 1 G T scaffold17956 ScafM INDEL 0001.scaffold00002 179967 1 . T scaffold17956 Both SNP 0001.scaffold00002 180055 1 C T scaffold17956 Both SNP 0001.scaffold00002 180084 1 C T scaffold17956 ReadM SNP 0001.scaffold00002 180152 1 A G - ReadM SNP 0001.scaffold00002 180155 1 C T - ScafM SNP 0001.scaffold00002 180288 3 ATA GCG scaffold17956 ScafM SNP 0001.scaffold00002 180314 1 T G scaffold17956 ScafM SNP 0001.scaffold00002 180351 1 G C scaffold17956 ScafM SNP 0001.scaffold00002 180363 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 180367 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 180369 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 180379 1 C T scaffold17956 Both SNP 0001.scaffold00002 180425 1 C G scaffold17956 ScafM SNP 0001.scaffold00002 180493 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 180506 2 GC AA scaffold17956 ScafM SNP 0001.scaffold00002 180510 1 G A scaffold17956 Both SNP 0001.scaffold00002 180559 1 T C scaffold17956 Both SNP 0001.scaffold00002 180648 1 C G scaffold17956 Both SNP 0001.scaffold00002 180660 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 180686 1 A C scaffold17956 ScafM SNP 0001.scaffold00002 180699 1 G A scaffold17956 ScafM INDEL 0001.scaffold00002 180736 4 GATC .... scaffold17956 ScafM INDEL 0001.scaffold00002 180741 2 TT .. scaffold17956 ScafM INDEL 0001.scaffold00002 180744 1 T . scaffold17956 ScafM INDEL 0001.scaffold00002 180800 1 T . scaffold17956 ScafM INDEL 0001.scaffold00002 180803 2 TA .. scaffold17956 ScafM SNP 0001.scaffold00002 180809 1 T A scaffold17956 ScafM INDEL 0001.scaffold00002 180811 3 TGA ... scaffold17956 Both SNP 0001.scaffold00002 180847 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 180898 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 180945 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 180956 2 AT GG scaffold17956 ScafM SNP 0001.scaffold00002 180976 1 C T scaffold17956 ScafM INDEL 0001.scaffold00002 180997 1 C . scaffold17956 ScafM INDEL 0001.scaffold00002 181019 2 CT .. scaffold17956 ScafM SNP 0001.scaffold00002 181028 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 181031 1 T G scaffold17956 ScafM SNP 0001.scaffold00002 181041 1 G T scaffold17956 ScafM SNP 0001.scaffold00002 181062 1 G T scaffold17956 ScafM SNP 0001.scaffold00002 181074 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 181098 1 A T scaffold17956 ScafM INDEL 0001.scaffold00002 181107 27 TTAAATTCGACATTTGCACGTACTTTC ........................... scaffold17956 ScafM SNP 0001.scaffold00002 181147 1 A G scaffold17956 Both SNP 0001.scaffold00002 181172 1 T A scaffold17956 Both SNP 0001.scaffold00002 181181 1 T A scaffold17956 Both SNP 0001.scaffold00002 181263 1 A G scaffold17956 Both SNP 0001.scaffold00002 181320 1 T C scaffold17956 Both SNP 0001.scaffold00002 181326 1 A G scaffold17956 Both SNP 0001.scaffold00002 181398 1 C T scaffold17956 Both SNP 0001.scaffold00002 181452 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 181466 1 T C scaffold17956 Both INDEL 0001.scaffold00002 181673 1 . T scaffold17956 Both SNP 0001.scaffold00002 181710 1 A C scaffold17956 Both SNP 0001.scaffold00002 181730 1 G A scaffold17956 Both SNP 0001.scaffold00002 181796 1 A G scaffold17956 Both SNP 0001.scaffold00002 181829 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 181904 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 181907 1 G T scaffold17956 ScafM SNP 0001.scaffold00002 181923 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 181925 1 G T scaffold17956 Both SNP 0001.scaffold00002 182047 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 182111 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182116 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182125 1 A G scaffold17956 ScafM INDEL 0001.scaffold00002 182152 3 TTG ... scaffold17956 ScafM SNP 0001.scaffold00002 182176 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182188 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 182192 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 182197 1 T G scaffold17956 ScafM INDEL 0001.scaffold00002 182216 10 TGGTTGCCAA .......... scaffold17956 ScafM SNP 0001.scaffold00002 182265 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182300 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182324 1 A G scaffold17956 ScafM INDEL 0001.scaffold00002 182327 1 T . scaffold17956 ScafM SNP 0001.scaffold00002 182338 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182349 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 182351 1 T C scaffold17956 ScafM INDEL 0001.scaffold00002 182390 1 C . scaffold17956 ScafM INDEL 0001.scaffold00002 182406 1 . T scaffold17956 ScafM SNP 0001.scaffold00002 182415 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182417 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182469 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 182499 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 182528 1 A T scaffold17956 ScafM SNP 0001.scaffold00002 182537 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 182545 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182575 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 182605 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 182617 1 C T scaffold17956 Both SNP 0001.scaffold00002 182769 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182798 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 182838 1 T A scaffold17956 ScafM SNP 0001.scaffold00002 182845 1 G A scaffold17956 ScafM SNP 0001.scaffold00002 182853 1 A C scaffold17956 ScafM SNP 0001.scaffold00002 182881 1 A T scaffold17956 ScafM SNP 0001.scaffold00002 182895 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 182906 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182912 1 C G scaffold17956 ScafM SNP 0001.scaffold00002 182932 1 G A scaffold17956 ScafM INDEL 0001.scaffold00002 182938 1 . A scaffold17956 ScafM SNP 0001.scaffold00002 182946 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 182949 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 182998 3 GGA AAT scaffold17956 ScafM SNP 0001.scaffold00002 183008 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 183011 1 A T scaffold17956 ScafM SNP 0001.scaffold00002 183046 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 183052 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 183062 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 183104 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 183162 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 183218 2 AA TT scaffold17956 ScafM SNP 0001.scaffold00002 183253 1 T C scaffold17956 ScafM SNP 0001.scaffold00002 183266 3 ATT TAA scaffold17956 ScafM SNP 0001.scaffold00002 183382 1 A G scaffold17956 ScafM SNP 0001.scaffold00002 183391 1 C G scaffold17956 ScafM SNP 0001.scaffold00002 183398 1 G T scaffold17956 ScafM SNP 0001.scaffold00002 183449 1 C A scaffold17956 ScafM SNP 0001.scaffold00002 183462 1 C T scaffold17956 ScafM SNP 0001.scaffold00002 183470 1 C T scaffold17956 ReadM SNP 0001.scaffold00002 184032 1 A T - ReadM SNP 0001.scaffold00002 184465 1 G A - ReadM INDEL 0001.scaffold00002 184491 1 G . - ReadM SNP 0001.scaffold00002 184525 1 C T - ReadM SNP 0001.scaffold00002 184554 1 T A - ReadM SNP 0001.scaffold00002 184558 1 T C - ReadM INDEL 0001.scaffold00002 184856 1 T . - ReadM SNP 0001.scaffold00002 184953 1 T A - ReadM SNP 0001.scaffold00002 185070 1 G T - ReadM SNP 0001.scaffold00002 185367 1 A C - ReadM SNP 0001.scaffold00002 185381 1 G A - ReadM SNP 0001.scaffold00002 185384 1 G A - ReadM SNP 0001.scaffold00002 185462 1 A T - ReadM SNP 0001.scaffold00002 185675 1 G A - ReadM SNP 0001.scaffold00002 185682 1 C A - Both SNP 0001.scaffold00002 185770 1 T C scaffold5218 ReadM SNP 0001.scaffold00002 185785 1 T C - ReadM SNP 0001.scaffold00002 185797 1 G C - ReadM SNP 0001.scaffold00002 185893 1 A G - ReadM SNP 0001.scaffold00002 185910 1 T C - ReadM SNP 0001.scaffold00002 185921 1 C T - ScafM SNP 0001.scaffold00002 185976 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 185993 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 186007 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 186017 1 C T scaffold5218 ScafM INDEL 0001.scaffold00002 186053 11 CTATTAATGGT ........... scaffold5218 ScafM SNP 0001.scaffold00002 186093 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 186142 1 C A scaffold5218 ScafM SNP 0001.scaffold00002 186154 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 186172 2 GT AA scaffold5218 Both SNP 0001.scaffold00002 186218 1 A G scaffold5218 Both SNP 0001.scaffold00002 186286 1 C T scaffold5218 Both SNP 0001.scaffold00002 186295 1 C T scaffold5218 Both SNP 0001.scaffold00002 186339 1 T A scaffold5218 Both SNP 0001.scaffold00002 186368 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 186416 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 186443 1 T A scaffold5218 Both SNP 0001.scaffold00002 186474 1 T A scaffold5218 Both SNP 0001.scaffold00002 186490 1 A G scaffold5218 ReadM SNP 0001.scaffold00002 186681 1 A G - ReadM SNP 0001.scaffold00002 186811 1 T G - ReadM SNP 0001.scaffold00002 186837 1 G A - ReadM SNP 0001.scaffold00002 186891 1 A C - ReadM SNP 0001.scaffold00002 186939 1 A C - ReadM SNP 0001.scaffold00002 186981 1 C T - ReadM SNP 0001.scaffold00002 187066 1 G T - ScafM SNP 0001.scaffold00002 187603 1 C A scaffold5218 ScafM SNP 0001.scaffold00002 187605 1 A G scaffold5218 Both SNP 0001.scaffold00002 187611 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 187686 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 187709 2 TA AT scaffold5218 ScafM SNP 0001.scaffold00002 187720 2 AG TA scaffold5218 ScafM SNP 0001.scaffold00002 187731 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 187769 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 187791 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 187793 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 187800 1 T G scaffold5218 ScafM SNP 0001.scaffold00002 187808 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 187825 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 187976 1 A T scaffold5218 ScafM SNP 0001.scaffold00002 187986 1 T C scaffold5218 Both SNP 0001.scaffold00002 188009 1 C A scaffold5218 ScafM SNP 0001.scaffold00002 188051 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 188076 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 188130 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 188137 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 188170 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 188185 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 188205 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 188248 1 A T scaffold5218 Both SNP 0001.scaffold00002 188261 1 C T scaffold5218 Both SNP 0001.scaffold00002 188323 1 G A scaffold5218 ReadM SNP 0001.scaffold00002 188363 1 G C - ReadM SNP 0001.scaffold00002 188369 1 T A - ScafM SNP 0001.scaffold00002 188395 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 188397 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 188493 1 C G scaffold5218 ScafM SNP 0001.scaffold00002 188495 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 188500 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 188521 1 G A scaffold5218 Both SNP 0001.scaffold00002 188599 1 A T scaffold5218 Both INDEL 0001.scaffold00002 188675 1 A . scaffold5218 Both SNP 0001.scaffold00002 188683 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 188718 2 TT CC scaffold5218 ScafM INDEL 0001.scaffold00002 188734 2 AT .. scaffold5218 ScafM SNP 0001.scaffold00002 188748 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 188753 1 T C scaffold5218 Both SNP 0001.scaffold00002 188775 1 G T scaffold5218 Both SNP 0001.scaffold00002 188846 1 A G scaffold5218 Both SNP 0001.scaffold00002 188912 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 189374 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 189403 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 189407 1 T G scaffold5218 ScafM SNP 0001.scaffold00002 189409 1 C A scaffold5218 ScafM SNP 0001.scaffold00002 189421 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 189431 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 189446 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 189482 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 189502 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 189546 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 189550 1 G C scaffold5218 ScafM SNP 0001.scaffold00002 189560 2 TA CG scaffold5218 ScafM SNP 0001.scaffold00002 189622 1 T G scaffold5218 ScafM SNP 0001.scaffold00002 189641 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 189675 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 189680 2 CC TT scaffold5218 ScafM SNP 0001.scaffold00002 189685 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 189708 2 GG TT scaffold5218 ScafM SNP 0001.scaffold00002 189740 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 189748 1 A G scaffold5218 ScafM INDEL 0001.scaffold00002 189759 1 C . scaffold5218 ScafM INDEL 0001.scaffold00002 189762 2 GA .. scaffold5218 ScafM SNP 0001.scaffold00002 189775 1 C G scaffold5218 ScafM SNP 0001.scaffold00002 189892 1 C G scaffold5218 ScafM SNP 0001.scaffold00002 189895 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 189932 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 189999 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 190023 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 190031 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 190045 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 190299 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 190305 1 T C scaffold5218 ScafM INDEL 0001.scaffold00002 190344 2 .. TT scaffold5218 ScafM SNP 0001.scaffold00002 190351 1 C T scaffold5218 ScafM INDEL 0001.scaffold00002 190792 1 A . scaffold5218 ScafM INDEL 0001.scaffold00002 190842 2 .. AC scaffold5218 ScafM INDEL 0001.scaffold00002 190844 1 . G scaffold5218 ScafM SNP 0001.scaffold00002 190847 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 190910 1 G A scaffold5218 ScafM INDEL 0001.scaffold00002 190944 2 .. TA scaffold5218 ScafM INDEL 0001.scaffold00002 190975 2 AA .. scaffold5218 ScafM SNP 0001.scaffold00002 191039 1 T G scaffold5218 ScafM SNP 0001.scaffold00002 191041 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 191080 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 191366 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 191377 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 191379 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 191406 2 CC TT scaffold5218 ScafM SNP 0001.scaffold00002 191411 1 G A scaffold5218 Both SNP 0001.scaffold00002 191452 1 T G scaffold5218 Both SNP 0001.scaffold00002 191493 1 C A scaffold5218 Both SNP 0001.scaffold00002 191555 1 G A scaffold5218 Both SNP 0001.scaffold00002 191568 1 G C scaffold5218 ScafM SNP 0001.scaffold00002 191594 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 191611 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 191618 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 191626 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 191633 1 C T scaffold5218 ScafM INDEL 0001.scaffold00002 191641 1 . C scaffold5218 ScafM SNP 0001.scaffold00002 191654 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 191671 1 A C scaffold5218 ScafM SNP 0001.scaffold00002 191679 1 C T scaffold5218 ScafM INDEL 0001.scaffold00002 191700 1 . A scaffold5218 ScafM SNP 0001.scaffold00002 191707 1 C G scaffold5218 ReadM INDEL 0001.scaffold00002 191959 1 T . - ReadM SNP 0001.scaffold00002 191966 1 C T - ReadM SNP 0001.scaffold00002 192010 1 G A - ScafM INDEL 0001.scaffold00002 192139 1 A . scaffold5218 ScafM SNP 0001.scaffold00002 192248 1 A T scaffold5218 ScafM SNP 0001.scaffold00002 192600 1 T C scaffold5218 ScafM INDEL 0001.scaffold00002 192603 1 . A scaffold5218 ScafM SNP 0001.scaffold00002 192710 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 192766 1 C A scaffold5218 ScafM SNP 0001.scaffold00002 192977 1 G T scaffold5218 ScafM SNP 0001.scaffold00002 193014 1 A T scaffold5218 ScafM SNP 0001.scaffold00002 193022 1 T A scaffold5218 ScafM SNP 0001.scaffold00002 193516 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 193548 1 A G scaffold5218 ScafM INDEL 0001.scaffold00002 193561 1 A . scaffold5218 ScafM INDEL 0001.scaffold00002 193591 2 AC .. scaffold5218 ScafM INDEL 0001.scaffold00002 193707 8 ........ TGGCTGTA scaffold5218 ScafM SNP 0001.scaffold00002 193781 1 T C scaffold5218 ScafM INDEL 0001.scaffold00002 193785 1 . T scaffold5218 ScafM SNP 0001.scaffold00002 194338 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 194423 2 GC AT scaffold5218 ScafM SNP 0001.scaffold00002 194457 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 194506 1 T C scaffold5218 ScafM INDEL 0001.scaffold00002 194514 4 .... AAGG scaffold5218 ScafM INDEL 0001.scaffold00002 194543 1 . T scaffold5218 ScafM SNP 0001.scaffold00002 196832 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 196839 1 A T scaffold5218 ScafM SNP 0001.scaffold00002 196890 2 CT TC scaffold5218 ScafM SNP 0001.scaffold00002 196929 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 196933 1 T A scaffold5218 ScafM SNP 0001.scaffold00002 196936 1 T A scaffold5218 ScafM INDEL 0001.scaffold00002 196939 2 .. TC scaffold5218 ScafM SNP 0001.scaffold00002 196955 3 ACC CAT scaffold5218 ScafM SNP 0001.scaffold00002 196972 1 T A scaffold5218 ScafM INDEL 0001.scaffold00002 197026 2 CA .. scaffold5218 ScafM INDEL 0001.scaffold00002 197030 3 CAG ... scaffold5218 ScafM SNP 0001.scaffold00002 197034 1 T C scaffold5218 ScafM INDEL 0001.scaffold00002 197073 1 . A scaffold5218 ScafM SNP 0001.scaffold00002 197075 1 G C scaffold5218 ScafM SNP 0001.scaffold00002 197087 1 A G scaffold5218 ScafM SNP 0001.scaffold00002 197093 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 197112 1 G A scaffold5218 ScafM INDEL 0001.scaffold00002 197118 4 .... ATTT scaffold5218 ScafM SNP 0001.scaffold00002 197126 1 T G scaffold5218 ScafM SNP 0001.scaffold00002 197148 1 T A scaffold5218 ScafM SNP 0001.scaffold00002 197181 1 A T scaffold5218 ScafM SNP 0001.scaffold00002 198758 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 198768 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 198771 1 C T scaffold5218 ScafM INDEL 0001.scaffold00002 198783 3 AAT .TC scaffold5218 ScafM SNP 0001.scaffold00002 198794 3 TGC AAT scaffold5218 ScafM SNP 0001.scaffold00002 198803 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 198834 1 G C scaffold5218 ScafM INDEL 0001.scaffold00002 198866 1 T . scaffold5218 ScafM INDEL 0001.scaffold00002 198884 1 A . scaffold5218 ScafM SNP 0001.scaffold00002 198887 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 198895 1 A C scaffold5218 ScafM INDEL 0001.scaffold00002 198901 1 . A scaffold5218 ScafM INDEL 0001.scaffold00002 198917 2 .. AA scaffold5218 ScafM INDEL 0001.scaffold00002 198920 1 . A scaffold5218 ScafM INDEL 0001.scaffold00002 198923 2 .. TT scaffold5218 ScafM SNP 0001.scaffold00002 198930 1 G C scaffold5218 ScafM SNP 0001.scaffold00002 198944 1 T G scaffold5218 ScafM INDEL 0001.scaffold00002 198954 1 T . scaffold5218 ScafM SNP 0001.scaffold00002 198960 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 198994 1 C T scaffold5218 ScafM SNP 0001.scaffold00002 198999 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 199015 1 G A scaffold5218 ScafM SNP 0001.scaffold00002 199028 1 G T scaffold5218 ScafM INDEL 0001.scaffold00002 199042 2 .. TT scaffold5218 ScafM SNP 0001.scaffold00002 199044 2 AA TT scaffold5218 ScafM SNP 0001.scaffold00002 199121 1 T G scaffold5218 ReadM INDEL 0001.scaffold00002 199973 1 . G - ReadM SNP 0001.scaffold00002 200010 1 T C - ReadM SNP 0001.scaffold00002 200124 1 C T - ReadM SNP 0001.scaffold00002 200152 1 C G - ReadM SNP 0001.scaffold00002 200155 1 C T - ReadM SNP 0001.scaffold00002 200372 1 C A - ReadM SNP 0001.scaffold00002 200413 1 T A - ReadM INDEL 0001.scaffold00002 200481 1 . A - ScafM SNP 0001.scaffold00002 206517 1 G A scaffold10010 ScafM SNP 0001.scaffold00002 206522 1 C A scaffold10010 ScafM SNP 0001.scaffold00002 206538 1 C A scaffold10010 ScafM SNP 0001.scaffold00002 206540 1 T A scaffold10010 ScafM SNP 0001.scaffold00002 206561 1 C T scaffold10010 ScafM SNP 0001.scaffold00002 206594 1 T A scaffold10010 ScafM SNP 0001.scaffold00002 206601 1 C T scaffold10010 ScafM SNP 0001.scaffold00002 206634 1 C T scaffold10010 ScafM SNP 0001.scaffold00002 206652 1 T C scaffold10010 ScafM SNP 0001.scaffold00002 206675 2 CG AA scaffold10010 ScafM INDEL 0001.scaffold00002 206692 3 TAT ... scaffold10010 ScafM SNP 0001.scaffold00002 206696 1 A G scaffold10010 ScafM SNP 0001.scaffold00002 206712 1 C T scaffold10010 ScafM SNP 0001.scaffold00002 206714 1 T C scaffold10010 ScafM SNP 0001.scaffold00002 206739 1 G C scaffold10010 ScafM SNP 0001.scaffold00002 206747 1 G T scaffold10010 ScafM INDEL 0001.scaffold00002 216734 1 G . scaffold5218 ScafM SNP 0001.scaffold00002 216742 1 T C scaffold5218 ScafM SNP 0001.scaffold00002 216755 1 A C scaffold5218 ScafM SNP 0002.scaffold00003 564 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 569 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 580 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 587 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 591 1 T A scaffold6067 ScafM INDEL 0002.scaffold00003 598 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 651 1 A T scaffold6067 ScafM INDEL 0002.scaffold00003 660 3 TTT ... scaffold6067 ScafM SNP 0002.scaffold00003 670 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 673 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 676 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 684 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 689 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 713 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 728 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 733 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 740 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 747 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 753 2 CA GT scaffold6067 ScafM SNP 0002.scaffold00003 768 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 775 3 ... CGA scaffold6067 ScafM SNP 0002.scaffold00003 787 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 1258 1 T C scaffold13735 ScafM INDEL 0002.scaffold00003 1262 1 . G scaffold13735 ScafM SNP 0002.scaffold00003 1281 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1285 1 C A scaffold13735 ScafM SNP 0002.scaffold00003 1291 2 TG CT scaffold13735 ScafM INDEL 0002.scaffold00003 1296 2 .. CC scaffold13735 ScafM INDEL 0002.scaffold00003 1299 1 . A scaffold13735 ScafM SNP 0002.scaffold00003 1301 1 C A scaffold13735 ScafM SNP 0002.scaffold00003 1305 1 C A scaffold13735 ScafM INDEL 0002.scaffold00003 1310 5 TATGT ...CC scaffold13735 ScafM SNP 0002.scaffold00003 1332 1 C A scaffold13735 ScafM SNP 0002.scaffold00003 1337 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1339 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1344 1 T C scaffold13735 ScafM SNP 0002.scaffold00003 1362 1 T C scaffold13735 ScafM INDEL 0002.scaffold00003 1380 2 AC .. scaffold13735 ScafM INDEL 0002.scaffold00003 1384 3 CGA ... scaffold13735 ScafM SNP 0002.scaffold00003 1390 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1392 2 TT AC scaffold13735 ScafM SNP 0002.scaffold00003 1402 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1418 1 T A scaffold13735 ScafM SNP 0002.scaffold00003 1428 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1435 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1437 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1441 2 GT AC scaffold13735 ScafM SNP 0002.scaffold00003 1454 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1460 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1468 2 AG GA scaffold13735 ScafM SNP 0002.scaffold00003 1474 2 TG CC scaffold13735 ScafM SNP 0002.scaffold00003 1480 1 A T scaffold13735 ScafM INDEL 0002.scaffold00003 1487 2 AT .. scaffold13735 ScafM SNP 0002.scaffold00003 1492 1 C A scaffold13735 ScafM SNP 0002.scaffold00003 1501 2 GC CT scaffold13735 ScafM SNP 0002.scaffold00003 1542 1 T C scaffold13735 ScafM SNP 0002.scaffold00003 1548 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1552 1 T C scaffold13735 ScafM INDEL 0002.scaffold00003 1559 1 C . scaffold13735 ScafM SNP 0002.scaffold00003 1561 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1564 1 T G scaffold13735 ScafM SNP 0002.scaffold00003 1566 2 TA GG scaffold13735 ScafM INDEL 0002.scaffold00003 1587 1 . G scaffold13735 ScafM SNP 0002.scaffold00003 1596 1 C A scaffold13735 ScafM SNP 0002.scaffold00003 1603 1 T G scaffold13735 ScafM SNP 0002.scaffold00003 1606 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1617 1 T C scaffold13735 ScafM SNP 0002.scaffold00003 1619 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1630 1 C T scaffold13735 ScafM SNP 0002.scaffold00003 1633 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1643 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1656 2 AT CA scaffold13735 ScafM SNP 0002.scaffold00003 1688 1 A G scaffold13735 ScafM SNP 0002.scaffold00003 1697 1 T A scaffold13735 ScafM SNP 0002.scaffold00003 1702 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 1707 1 G T scaffold13735 ScafM SNP 0002.scaffold00003 1711 1 A T scaffold13735 ScafM SNP 0002.scaffold00003 1713 1 C G scaffold13735 ScafM SNP 0002.scaffold00003 1718 1 G A scaffold13735 ScafM SNP 0002.scaffold00003 2102 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 2106 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 2111 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 2115 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 2136 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 2152 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 2158 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 2161 1 A C scaffold6067 ScafM INDEL 0002.scaffold00003 2167 2 GT .C scaffold6067 ScafM SNP 0002.scaffold00003 2179 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 2190 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 2204 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 2211 4 .... TTTA scaffold6067 ScafM SNP 0002.scaffold00003 2224 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 2230 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 2237 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 2248 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 2251 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 2253 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 2255 1 T A scaffold6067 ScafM INDEL 0002.scaffold00003 2261 1 C . scaffold6067 ScafM SNP 0002.scaffold00003 2287 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 2292 1 G C scaffold6067 ScafM INDEL 0002.scaffold00003 2336 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 2345 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 2350 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 2362 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 2440 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 2449 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 2491 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 2496 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 2503 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 2507 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 2508 1 . A scaffold6067 ScafM INDEL 0002.scaffold00003 2516 2 TA .. scaffold6067 ScafM SNP 0002.scaffold00003 4512 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 4521 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 4523 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 4539 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 4551 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 4562 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 4575 2 TG CA scaffold6067 ScafM SNP 0002.scaffold00003 4587 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 4592 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 4595 4 .... AATC scaffold6067 ScafM SNP 0002.scaffold00003 4601 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 4618 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 4635 1 T A scaffold6067 ScafM INDEL 0002.scaffold00003 4641 16 ................ CTCAATTTACCTAATT scaffold6067 ScafM INDEL 0002.scaffold00003 4642 2 .. AA scaffold6067 ScafM SNP 0002.scaffold00003 4646 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 4648 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 4655 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 4660 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 4670 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 4687 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 4692 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 4694 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 4708 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 4729 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 4762 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 4797 16 ................ ACTATACTGATATAGT scaffold6067 ScafM INDEL 0002.scaffold00003 4816 4 CCGT .... scaffold6067 ScafM INDEL 0002.scaffold00003 4821 1 C . scaffold6067 ScafM INDEL 0002.scaffold00003 4853 11 ........... TCGGGAAAAAT scaffold6067 ScafM INDEL 0002.scaffold00003 4855 7 ....... GCTTTGG scaffold6067 ScafM INDEL 0002.scaffold00003 4882 1 A . scaffold6067 ScafM SNP 0002.scaffold00003 4897 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 4903 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 4905 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 4918 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 5007 2 GG AC scaffold6067 ScafM SNP 0002.scaffold00003 5022 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 5056 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 5133 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 5155 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 5174 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 5190 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 5201 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 5214 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 5216 2 AA GC scaffold6067 ScafM SNP 0002.scaffold00003 5231 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 5245 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 5248 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 5253 1 A C scaffold6067 ScafM INDEL 0002.scaffold00003 5281 1 . G scaffold6067 ScafM SNP 0002.scaffold00003 5283 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 5290 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 5292 3 CAA ATG scaffold6067 ScafM SNP 0002.scaffold00003 5306 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 18001 14 .............. ATTCCATATTTTGC scaffold4236 ScafM INDEL 0002.scaffold00003 18016 2 .. TT scaffold4236 ScafM SNP 0002.scaffold00003 18434 1 G A scaffold13949 ScafM SNP 0002.scaffold00003 18469 1 C T scaffold13949 ScafM SNP 0002.scaffold00003 18471 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18498 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18503 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18543 1 G A scaffold13949 ScafM SNP 0002.scaffold00003 18549 2 GA TG scaffold13949 ScafM SNP 0002.scaffold00003 18604 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18611 1 T A scaffold13949 ScafM SNP 0002.scaffold00003 18620 1 A T scaffold13949 ScafM INDEL 0002.scaffold00003 18659 8 ATGAAAAT ........ scaffold13949 ScafM SNP 0002.scaffold00003 18701 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18719 1 C T scaffold13949 ScafM SNP 0002.scaffold00003 18754 1 T C scaffold13949 ScafM SNP 0002.scaffold00003 18771 1 C T scaffold13949 ScafM SNP 0002.scaffold00003 18811 1 C G scaffold13949 ScafM SNP 0002.scaffold00003 18815 2 CG AA scaffold13949 ScafM SNP 0002.scaffold00003 18836 1 A G scaffold13949 ScafM SNP 0002.scaffold00003 18838 1 A G scaffold13949 ScafM INDEL 0002.scaffold00003 19149 4 TAAG .... scaffold3614 ScafM SNP 0002.scaffold00003 27348 1 A T scaffold4249 ScafM SNP 0002.scaffold00003 27365 1 G C scaffold4249 ScafM SNP 0002.scaffold00003 27376 1 A G scaffold4249 ScafM SNP 0002.scaffold00003 27398 1 G A scaffold4249 ScafM SNP 0002.scaffold00003 27415 1 C G scaffold4249 ScafM SNP 0002.scaffold00003 27420 1 T C scaffold4249 ScafM SNP 0002.scaffold00003 27434 1 C A scaffold4249 ScafM SNP 0002.scaffold00003 33206 2 AT GG scaffold6067 ScafM SNP 0002.scaffold00003 33248 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 33261 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 33274 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 33281 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 33292 1 C A scaffold6067 ScafM INDEL 0002.scaffold00003 33497 4 TAGC .... scaffold6067 Both SNP 0002.scaffold00003 33715 1 C T scaffold6067 Both SNP 0002.scaffold00003 33758 1 C T scaffold6067 Both SNP 0002.scaffold00003 33847 1 A G scaffold6067 Both SNP 0002.scaffold00003 33914 1 T C scaffold6067 Both SNP 0002.scaffold00003 33918 1 A C scaffold6067 Both SNP 0002.scaffold00003 33938 1 T C scaffold6067 Both SNP 0002.scaffold00003 34196 1 G T scaffold6067 Both SNP 0002.scaffold00003 34274 1 A G scaffold6067 Both SNP 0002.scaffold00003 34358 1 G A scaffold6067 Both SNP 0002.scaffold00003 34436 1 T C scaffold6067 Both SNP 0002.scaffold00003 34534 1 T C scaffold6067 Both SNP 0002.scaffold00003 34562 1 T C scaffold6067 Both SNP 0002.scaffold00003 34568 1 A G scaffold6067 ReadM SNP 0002.scaffold00003 34616 1 A G - ReadM SNP 0002.scaffold00003 34628 1 T G - Both SNP 0002.scaffold00003 34832 1 A G scaffold6067 Both SNP 0002.scaffold00003 34836 1 A T scaffold6067 Both SNP 0002.scaffold00003 34893 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 35216 1 G T scaffold6067 ScafM INDEL 0002.scaffold00003 35221 2 CA .G scaffold6067 ScafM SNP 0002.scaffold00003 35242 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 35250 3 GTC ..A scaffold6067 ScafM SNP 0002.scaffold00003 35256 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 35262 1 A C scaffold6067 ScafM INDEL 0002.scaffold00003 35271 8 ATTTAGGG ........ scaffold6067 ScafM INDEL 0002.scaffold00003 35281 16 AACGTAAGGTAGGATA ................ scaffold6067 ScafM INDEL 0002.scaffold00003 35299 3 AAT ... scaffold6067 ScafM INDEL 0002.scaffold00003 35303 1 T . scaffold6067 ScafM INDEL 0002.scaffold00003 35305 1 C . scaffold6067 ScafM SNP 0002.scaffold00003 35318 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35320 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 35328 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 35340 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 35351 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 35358 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 35363 1 A . scaffold6067 ScafM SNP 0002.scaffold00003 35519 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 35522 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35528 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 35532 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 35574 1 . C scaffold6067 ScafM SNP 0002.scaffold00003 35576 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 35583 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 35593 1 T A scaffold6067 ScafM INDEL 0002.scaffold00003 35605 6 AATGAA ...... scaffold6067 ScafM SNP 0002.scaffold00003 35613 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35632 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 35641 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 35647 2 CA GG scaffold6067 ScafM INDEL 0002.scaffold00003 35676 1 . G scaffold6067 ScafM SNP 0002.scaffold00003 35685 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 35689 1 . C scaffold6067 ScafM INDEL 0002.scaffold00003 35698 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 35700 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 35722 3 GCG ... scaffold6067 ScafM INDEL 0002.scaffold00003 35728 3 GGA ... scaffold6067 ScafM SNP 0002.scaffold00003 35760 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 35780 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 35783 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35817 1 A C scaffold6067 ScafM INDEL 0002.scaffold00003 35832 9 TCATTTTGC ......... scaffold6067 ScafM INDEL 0002.scaffold00003 35843 2 CC .. scaffold6067 ScafM SNP 0002.scaffold00003 35875 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35897 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 35929 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 35946 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 35950 2 TC AT scaffold6067 ScafM SNP 0002.scaffold00003 35964 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 35997 9 ATGTTCAAA ......... scaffold6067 ScafM SNP 0002.scaffold00003 36021 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 36025 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 36037 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 36041 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 36057 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 36060 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 36073 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 36079 1 C G scaffold6067 ScafM INDEL 0002.scaffold00003 36084 1 T . scaffold6067 ScafM SNP 0002.scaffold00003 36089 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 36096 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 36105 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 36115 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 36117 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 41690 2 AT GC scaffold153 ScafM SNP 0002.scaffold00003 41696 1 C T scaffold153 ScafM SNP 0002.scaffold00003 41698 1 A G scaffold153 ScafM SNP 0002.scaffold00003 41707 1 C G scaffold153 ScafM SNP 0002.scaffold00003 41716 1 C T scaffold153 ScafM SNP 0002.scaffold00003 41721 1 T C scaffold153 ScafM SNP 0002.scaffold00003 41726 1 A G scaffold153 ScafM SNP 0002.scaffold00003 41732 1 C T scaffold153 ScafM SNP 0002.scaffold00003 41759 1 G C scaffold153 ScafM SNP 0002.scaffold00003 41761 2 TG CC scaffold153 ScafM SNP 0002.scaffold00003 41771 1 C T scaffold153 ScafM SNP 0002.scaffold00003 52215 1 T A scaffold1910 ScafM SNP 0002.scaffold00003 52235 1 C A scaffold1910 ScafM SNP 0002.scaffold00003 52246 1 G T scaffold1910 ScafM SNP 0002.scaffold00003 52251 1 G A scaffold1910 ScafM SNP 0002.scaffold00003 52258 1 C A scaffold1910 ScafM SNP 0002.scaffold00003 52263 2 AC GT scaffold1910 ScafM SNP 0002.scaffold00003 52297 1 T A scaffold1910 ScafM SNP 0002.scaffold00003 52303 1 G A scaffold1910 ScafM SNP 0002.scaffold00003 52314 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52358 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 52387 1 G A scaffold1910 ScafM SNP 0002.scaffold00003 52397 2 GT AC scaffold1910 ScafM SNP 0002.scaffold00003 52414 1 G A scaffold1910 ScafM SNP 0002.scaffold00003 52416 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52427 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52430 1 C T scaffold1910 ScafM SNP 0002.scaffold00003 52443 1 A T scaffold1910 ScafM SNP 0002.scaffold00003 52449 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 52452 1 C A scaffold1910 ScafM SNP 0002.scaffold00003 52477 1 T A scaffold1910 ScafM SNP 0002.scaffold00003 52494 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 52504 1 G A scaffold1910 ScafM SNP 0002.scaffold00003 52515 1 T A scaffold1910 ScafM SNP 0002.scaffold00003 52523 1 C G scaffold1910 ScafM SNP 0002.scaffold00003 52538 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 52543 4 TTTG GAAA scaffold1910 ScafM INDEL 0002.scaffold00003 52552 2 .. TA scaffold1910 ScafM SNP 0002.scaffold00003 52554 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52556 1 A C scaffold1910 ScafM SNP 0002.scaffold00003 52573 1 C G scaffold1910 ScafM SNP 0002.scaffold00003 52590 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52610 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 52616 2 AT GC scaffold1910 ScafM SNP 0002.scaffold00003 52650 2 AA CT scaffold1910 ScafM SNP 0002.scaffold00003 52654 1 T C scaffold1910 ScafM SNP 0002.scaffold00003 52664 1 A G scaffold1910 ScafM SNP 0002.scaffold00003 56689 1 T C scaffold8700 ScafM SNP 0002.scaffold00003 56691 1 C T scaffold8700 ScafM SNP 0002.scaffold00003 56787 1 A G scaffold8700 ScafM SNP 0002.scaffold00003 66596 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 66609 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 66680 2 GA AG scaffold6067 ScafM SNP 0002.scaffold00003 66686 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 66695 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 66706 1 T G scaffold6067 ScafM INDEL 0002.scaffold00003 66745 2 TG .. scaffold6067 ScafM SNP 0002.scaffold00003 66756 1 G A scaffold6067 Both SNP 0002.scaffold00003 66862 1 T C scaffold6067 Both SNP 0002.scaffold00003 66921 1 A G scaffold6067 Both SNP 0002.scaffold00003 66926 1 G T scaffold6067 Both SNP 0002.scaffold00003 67034 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 67074 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 67082 1 G A scaffold6067 Both SNP 0002.scaffold00003 67127 1 G A scaffold6067 Both SNP 0002.scaffold00003 67164 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 67209 1 G . scaffold6067 ScafM SNP 0002.scaffold00003 67658 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 67685 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 67730 4 .... ATTA scaffold6067 ScafM SNP 0002.scaffold00003 67739 2 TT CC scaffold6067 ScafM SNP 0002.scaffold00003 67769 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 67782 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 67809 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 67823 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 67826 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 67833 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 67848 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 67851 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 67909 2 TC CT scaffold6067 ScafM SNP 0002.scaffold00003 67967 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 68012 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 69854 1 C T scaffold12967 ScafM SNP 0002.scaffold00003 69887 1 A G scaffold12967 ScafM SNP 0002.scaffold00003 69889 1 A G scaffold12967 ScafM SNP 0002.scaffold00003 69902 1 C T scaffold12967 ScafM SNP 0002.scaffold00003 69904 1 A C scaffold12967 ScafM SNP 0002.scaffold00003 69911 1 A C scaffold12967 ScafM SNP 0002.scaffold00003 69932 1 C T scaffold12967 ScafM SNP 0002.scaffold00003 69934 1 A G scaffold12967 ScafM SNP 0002.scaffold00003 69936 1 C T scaffold12967 ScafM SNP 0002.scaffold00003 69939 1 C T scaffold12967 ScafM SNP 0002.scaffold00003 69941 1 A G scaffold12967 ScafM SNP 0002.scaffold00003 69954 2 TT CC scaffold12967 ScafM SNP 0002.scaffold00003 69958 1 G A scaffold12967 ScafM SNP 0002.scaffold00003 69964 1 T G scaffold12967 ScafM SNP 0002.scaffold00003 69971 1 A G scaffold12967 ScafM SNP 0002.scaffold00003 69987 1 T C scaffold12967 ScafM SNP 0002.scaffold00003 69989 1 G A scaffold12967 ScafM SNP 0002.scaffold00003 70503 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 70514 2 GA TT scaffold6067 ScafM SNP 0002.scaffold00003 70539 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 70558 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 70586 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 70601 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 70629 1 C G scaffold6067 ScafM INDEL 0002.scaffold00003 70686 1 . T scaffold6067 ScafM INDEL 0002.scaffold00003 70698 1 A . scaffold6067 ScafM SNP 0002.scaffold00003 70732 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 70766 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 70782 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 70785 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 70797 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 70826 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 70874 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 70889 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 70896 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 70905 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 70923 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 70930 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 70949 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 70959 4 .... TATA scaffold6067 ScafM SNP 0002.scaffold00003 71011 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 71057 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 71077 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 71083 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 71101 1 G C scaffold6067 Both SNP 0002.scaffold00003 71117 1 G A scaffold6067 Both SNP 0002.scaffold00003 71128 1 A C scaffold6067 ReadM SNP 0002.scaffold00003 71252 1 G A - ReadM INDEL 0002.scaffold00003 72034 1 . C - ReadM SNP 0002.scaffold00003 73106 1 A C - ReadM SNP 0002.scaffold00003 73116 1 A G - ReadM SNP 0002.scaffold00003 73242 1 C T - ReadM SNP 0002.scaffold00003 73254 1 T C - ReadM SNP 0002.scaffold00003 73288 1 A C - ReadM SNP 0002.scaffold00003 73789 1 T C - ScafM SNP 0002.scaffold00003 74855 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 74868 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 74892 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 74956 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 75002 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 75006 5 TCCTC ..... scaffold6067 ScafM SNP 0002.scaffold00003 75025 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 75045 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 75057 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 75062 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 75098 1 . G scaffold6067 ReadM INDEL 0002.scaffold00003 75510 1 . G - ReadM SNP 0002.scaffold00003 75533 1 G T - ReadM SNP 0002.scaffold00003 75548 1 G A - ScafM SNP 0002.scaffold00003 76107 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 76140 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 76160 2 TG CA scaffold6067 ScafM INDEL 0002.scaffold00003 76198 1 C . scaffold6067 ScafM SNP 0002.scaffold00003 76206 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 76228 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 76257 1 . A scaffold6067 ScafM INDEL 0002.scaffold00003 76288 10 .......... GATCAACATT scaffold6067 ScafM SNP 0002.scaffold00003 76310 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 76323 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 76412 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 76414 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 76427 2 TT CA scaffold6067 ScafM SNP 0002.scaffold00003 76432 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 76442 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 76495 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 76497 1 A G scaffold6067 Both SNP 0002.scaffold00003 76516 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 76557 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 76584 1 C A scaffold6067 ScafM INDEL 0002.scaffold00003 76620 45 ............................................. CACCACTAATACCAATAACCTCTGCTCCCGCTTTGAAGATGAGTC scaffold6067 ScafM INDEL 0002.scaffold00003 76621 2 .. TC scaffold6067 ScafM SNP 0002.scaffold00003 76670 1 A C scaffold6067 Both SNP 0002.scaffold00003 76679 1 A G scaffold6067 Both SNP 0002.scaffold00003 76724 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 76763 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 76769 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 76807 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 77181 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 77192 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 77218 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 77243 2 TT AG scaffold6067 Both INDEL 0002.scaffold00003 77297 1 . T scaffold6067 Both SNP 0002.scaffold00003 77392 1 A T scaffold6067 Both SNP 0002.scaffold00003 77462 1 A G scaffold6067 Both SNP 0002.scaffold00003 77475 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 77524 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 77527 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 77534 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 77561 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 77586 1 A G scaffold6067 ScafM INDEL 0002.scaffold00003 77588 1 A . scaffold6067 ScafM INDEL 0002.scaffold00003 77603 8 ATAAAGAG ........ scaffold6067 ScafM INDEL 0002.scaffold00003 77613 2 AA .. scaffold6067 ScafM SNP 0002.scaffold00003 77627 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 77639 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 77651 1 A T scaffold6067 ScafM INDEL 0002.scaffold00003 77656 4 AAGG .... scaffold6067 Both SNP 0002.scaffold00003 77679 1 A G scaffold6067 ReadM SNP 0002.scaffold00003 77902 1 A C - ReadM SNP 0002.scaffold00003 77916 1 T A - ReadM SNP 0002.scaffold00003 78096 1 G C - ReadM SNP 0002.scaffold00003 78210 1 G A - Both SNP 0002.scaffold00003 78262 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 78301 1 A T scaffold6067 ScafM INDEL 0002.scaffold00003 78306 1 . C scaffold6067 ScafM SNP 0002.scaffold00003 78309 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 78321 3 CTG ... scaffold6067 ScafM SNP 0002.scaffold00003 78342 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 78358 1 A G scaffold6067 Both SNP 0002.scaffold00003 78483 1 A T scaffold6067 Both SNP 0002.scaffold00003 78520 1 A C scaffold6067 ScafM INDEL 0002.scaffold00003 78545 5 ..... CAAGG scaffold6067 ScafM SNP 0002.scaffold00003 78546 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 78553 1 A C scaffold6067 Both SNP 0002.scaffold00003 78663 1 G C scaffold6067 Both SNP 0002.scaffold00003 78705 1 G A scaffold6067 Both SNP 0002.scaffold00003 78812 1 T C scaffold6067 Both SNP 0002.scaffold00003 78814 1 T G scaffold6067 Both SNP 0002.scaffold00003 78852 1 G A scaffold6067 Both INDEL 0002.scaffold00003 79012 2 .. AA scaffold6067 ScafM INDEL 0002.scaffold00003 79037 4 CGAT .... scaffold6067 Both SNP 0002.scaffold00003 79064 1 T A scaffold6067 Both SNP 0002.scaffold00003 79149 1 A T scaffold6067 Both SNP 0002.scaffold00003 79168 1 G T scaffold6067 Both SNP 0002.scaffold00003 79244 1 A G scaffold6067 Both SNP 0002.scaffold00003 79275 1 T G scaffold6067 Both SNP 0002.scaffold00003 79279 1 C T scaffold6067 Both SNP 0002.scaffold00003 79428 1 A C scaffold6067 Both SNP 0002.scaffold00003 79583 1 G C scaffold6067 Both SNP 0002.scaffold00003 79709 1 A G scaffold6067 Both SNP 0002.scaffold00003 79743 1 G A scaffold6067 Both SNP 0002.scaffold00003 79748 1 C T scaffold6067 Both SNP 0002.scaffold00003 79775 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 79830 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 79849 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 79853 1 T C scaffold6067 Both SNP 0002.scaffold00003 79875 1 A G scaffold6067 Both SNP 0002.scaffold00003 79902 1 T C scaffold6067 Both SNP 0002.scaffold00003 80049 1 C A scaffold6067 Both SNP 0002.scaffold00003 80178 1 A T scaffold6067 Both SNP 0002.scaffold00003 80189 1 T G scaffold6067 Both SNP 0002.scaffold00003 80238 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 80271 1 T . scaffold6067 Both INDEL 0002.scaffold00003 80297 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 80299 1 A T scaffold6067 Both SNP 0002.scaffold00003 80445 1 T A scaffold6067 Both SNP 0002.scaffold00003 80862 1 T G scaffold6067 Both INDEL 0002.scaffold00003 81332 1 . A scaffold6067 Both SNP 0002.scaffold00003 81525 1 C G scaffold6067 Both SNP 0002.scaffold00003 81553 1 C T scaffold6067 Both SNP 0002.scaffold00003 81694 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 82109 1 T C scaffold6067 Both SNP 0002.scaffold00003 82196 1 G A scaffold6067 Both SNP 0002.scaffold00003 82408 1 T A scaffold6067 Both SNP 0002.scaffold00003 82655 1 C A scaffold6067 Both SNP 0002.scaffold00003 82659 1 A G scaffold6067 Both SNP 0002.scaffold00003 82663 1 G T scaffold6067 ReadM SNP 0002.scaffold00003 82745 1 T C - ReadM SNP 0002.scaffold00003 82759 1 T C - ReadM SNP 0002.scaffold00003 82847 1 T C - ReadM SNP 0002.scaffold00003 82917 1 G T - Both SNP 0002.scaffold00003 83161 1 C G scaffold6067 Both SNP 0002.scaffold00003 83196 1 C T scaffold6067 Both SNP 0002.scaffold00003 83395 1 C A scaffold6067 ReadM SNP 0002.scaffold00003 83555 1 T C - ReadM SNP 0002.scaffold00003 83568 1 T C - ReadM SNP 0002.scaffold00003 83648 1 A G - ReadM SNP 0002.scaffold00003 83669 1 C T - ReadM SNP 0002.scaffold00003 83700 1 A G - ReadM SNP 0002.scaffold00003 83753 1 C T - ReadM SNP 0002.scaffold00003 83764 1 G A - ReadM SNP 0002.scaffold00003 83876 1 C T - Both INDEL 0002.scaffold00003 84038 2 .. AA scaffold6067 Both SNP 0002.scaffold00003 84537 1 C A scaffold6067 Both SNP 0002.scaffold00003 84682 1 T C scaffold6067 Both SNP 0002.scaffold00003 85273 1 C T scaffold6067 Both SNP 0002.scaffold00003 85356 1 A T scaffold6067 Both SNP 0002.scaffold00003 85476 1 G A scaffold6067 Both SNP 0002.scaffold00003 85607 1 C G scaffold6067 Both INDEL 0002.scaffold00003 85701 1 . A scaffold6067 Both SNP 0002.scaffold00003 85708 1 G C scaffold6067 Both SNP 0002.scaffold00003 85739 1 A C scaffold6067 Both SNP 0002.scaffold00003 85794 1 C A scaffold6067 Both SNP 0002.scaffold00003 85800 1 A G scaffold6067 Both SNP 0002.scaffold00003 85883 1 T C scaffold6067 Both SNP 0002.scaffold00003 86071 1 A C scaffold6067 Both SNP 0002.scaffold00003 86138 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 86157 1 G A scaffold6067 Both SNP 0002.scaffold00003 86219 1 C A scaffold6067 ReadM SNP 0002.scaffold00003 86325 1 C T - Both SNP 0002.scaffold00003 86773 1 T C scaffold6067 Both SNP 0002.scaffold00003 86787 1 A T scaffold6067 Both SNP 0002.scaffold00003 86884 1 C T scaffold6067 Both SNP 0002.scaffold00003 87187 1 A G scaffold6067 Both SNP 0002.scaffold00003 87387 1 A G scaffold6067 Both SNP 0002.scaffold00003 87481 1 T C scaffold6067 Both SNP 0002.scaffold00003 87657 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 87759 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 87769 1 A G scaffold6067 Both SNP 0002.scaffold00003 88449 1 G A scaffold6067 Both SNP 0002.scaffold00003 88474 1 A G scaffold6067 Both SNP 0002.scaffold00003 88512 1 A G scaffold6067 Both SNP 0002.scaffold00003 88704 1 C T scaffold6067 Both SNP 0002.scaffold00003 88860 1 T G scaffold6067 Both SNP 0002.scaffold00003 89131 1 T A scaffold6067 Both SNP 0002.scaffold00003 89212 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 89327 2 GT AA scaffold6067 ScafM INDEL 0002.scaffold00003 89359 12 AGATATTAGAAT ............ scaffold6067 Both SNP 0002.scaffold00003 89418 1 C T scaffold6067 Both INDEL 0002.scaffold00003 89496 2 CC .. scaffold6067 Both SNP 0002.scaffold00003 89538 1 C T scaffold6067 Both SNP 0002.scaffold00003 89604 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 89668 1 A T scaffold6067 ScafM INDEL 0002.scaffold00003 89716 29 ............................. CACCCCTCAAAAAAAAATTAACTCCTACA scaffold6067 ScafM INDEL 0002.scaffold00003 89717 2 .. TC scaffold6067 ScafM SNP 0002.scaffold00003 89722 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 89761 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 89784 1 G C scaffold6067 ScafM INDEL 0002.scaffold00003 89785 1 . T scaffold6067 ScafM INDEL 0002.scaffold00003 89795 1 . T scaffold6067 ScafM INDEL 0002.scaffold00003 89838 1 . A scaffold6067 ScafM SNP 0002.scaffold00003 89871 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 89873 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 89886 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 89891 2 TG AA scaffold6067 ScafM SNP 0002.scaffold00003 89900 1 T A scaffold6067 Both SNP 0002.scaffold00003 89994 1 T C scaffold6067 Both SNP 0002.scaffold00003 90059 1 C T scaffold6067 Both SNP 0002.scaffold00003 90102 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90114 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 90139 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 90149 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 90154 1 G C scaffold6067 ScafM SNP 0002.scaffold00003 90156 1 A C scaffold6067 Both SNP 0002.scaffold00003 90188 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 90321 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 90372 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 90383 1 A C scaffold6067 ScafM SNP 0002.scaffold00003 90404 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90408 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 90411 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 90415 1 G A scaffold6067 ScafM INDEL 0002.scaffold00003 90428 1 . C scaffold6067 ScafM SNP 0002.scaffold00003 90443 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 90446 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90448 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 90454 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 90458 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 90462 2 GA TG scaffold6067 ScafM SNP 0002.scaffold00003 90470 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90490 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90492 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 90498 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 90518 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 90521 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 90716 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 90753 1 . C scaffold6067 ScafM SNP 0002.scaffold00003 90765 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 90775 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 90825 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 90847 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 90854 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 90872 1 T C scaffold6067 Both SNP 0002.scaffold00003 90899 1 G A scaffold6067 Both SNP 0002.scaffold00003 90929 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 90993 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 91179 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 91185 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 91227 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 91230 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 91233 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 91261 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 91274 1 T A scaffold6067 ScafM SNP 0002.scaffold00003 91589 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 91701 1 G T scaffold6067 ScafM SNP 0002.scaffold00003 91716 1 A T scaffold6067 ScafM INDEL 0002.scaffold00003 91727 1 T . scaffold6067 ScafM INDEL 0002.scaffold00003 91747 2 .. TT scaffold6067 ScafM SNP 0002.scaffold00003 91751 1 C G scaffold6067 ScafM SNP 0002.scaffold00003 91768 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 91774 1 A T scaffold6067 ScafM SNP 0002.scaffold00003 91779 1 T G scaffold6067 ScafM SNP 0002.scaffold00003 91786 1 C A scaffold6067 ScafM SNP 0002.scaffold00003 91790 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 91819 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 91824 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 91840 1 C T scaffold6067 ScafM INDEL 0002.scaffold00003 94752 2 .. TT scaffold2467 ReadM SNP 0002.scaffold00003 98031 1 C T - ReadM SNP 0002.scaffold00003 98047 1 C T - ReadM SNP 0002.scaffold00003 98058 1 T C - ScafM SNP 0002.scaffold00003 98496 1 T G scaffold6067 ScafM INDEL 0002.scaffold00003 98556 1 . T scaffold6067 ScafM SNP 0002.scaffold00003 98603 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 98608 1 C T scaffold6067 ScafM SNP 0002.scaffold00003 98614 1 G A scaffold6067 ScafM SNP 0002.scaffold00003 98630 1 A G scaffold6067 ScafM SNP 0002.scaffold00003 98635 1 T C scaffold6067 ScafM SNP 0002.scaffold00003 98640 1 T C scaffold6067 ScafM INDEL 0002.scaffold00003 98663 1 . A scaffold6067 ScafM SNP 0002.scaffold00003 99409 1 G T scaffold1438 ScafM INDEL 0002.scaffold00003 99425 1 G . scaffold1438 ScafM INDEL 0002.scaffold00003 99428 1 T . scaffold1438 ScafM SNP 0002.scaffold00003 99462 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 99543 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 99591 1 G T scaffold1438 ScafM SNP 0002.scaffold00003 99626 1 T G scaffold1438 ScafM SNP 0002.scaffold00003 99634 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 99685 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 99689 1 T A scaffold1438 ScafM SNP 0002.scaffold00003 99746 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 99773 2 AA CT scaffold1438 ScafM INDEL 0002.scaffold00003 99776 2 .. TA scaffold1438 ScafM SNP 0002.scaffold00003 99799 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 99802 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 99820 1 G T scaffold1438 ScafM SNP 0002.scaffold00003 99873 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 99913 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 99928 1 G T scaffold1438 ScafM SNP 0002.scaffold00003 99930 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 99965 2 GC AT scaffold1438 ScafM SNP 0002.scaffold00003 99975 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 100036 1 C A scaffold1438 ScafM SNP 0002.scaffold00003 100131 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 100184 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 100219 1 A G scaffold1438 ScafM SNP 0002.scaffold00003 100291 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 100328 1 G T scaffold1438 ScafM SNP 0002.scaffold00003 100357 1 C G scaffold1438 ScafM SNP 0002.scaffold00003 100382 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 100425 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 100454 1 A T scaffold1438 ScafM SNP 0002.scaffold00003 100509 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 100521 1 G C scaffold1438 ScafM SNP 0002.scaffold00003 100524 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 100544 1 C A scaffold1438 ScafM SNP 0002.scaffold00003 100550 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 100568 1 T C scaffold1438 ScafM INDEL 0002.scaffold00003 100580 2 .A GT scaffold1438 ScafM SNP 0002.scaffold00003 100663 1 T C scaffold1438 Both SNP 0002.scaffold00003 100761 1 C G scaffold1438 Both SNP 0002.scaffold00003 100838 1 A G scaffold1438 Both SNP 0002.scaffold00003 100849 1 A T scaffold1438 ScafM SNP 0002.scaffold00003 101025 1 A T scaffold1438 ScafM INDEL 0002.scaffold00003 101094 2 AT .. scaffold1438 ScafM SNP 0002.scaffold00003 101129 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 101142 1 C A scaffold1438 ScafM SNP 0002.scaffold00003 101194 1 A T scaffold1438 ScafM SNP 0002.scaffold00003 101213 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 101229 1 C T scaffold1438 ScafM SNP 0002.scaffold00003 101243 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 101248 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 101259 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 101559 1 G C scaffold1438 ScafM SNP 0002.scaffold00003 101574 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 101576 1 G A scaffold1438 ScafM SNP 0002.scaffold00003 101585 1 T C scaffold1438 ScafM SNP 0002.scaffold00003 101606 1 G T scaffold1438 ScafM INDEL 0002.scaffold00003 101622 1 . A scaffold1438 ScafM SNP 0002.scaffold00003 101700 1 C T scaffold1438 Both SNP 0002.scaffold00003 101770 1 G A scaffold1438 Both SNP 0002.scaffold00003 101799 1 A G scaffold1438 Both SNP 0002.scaffold00003 101819 1 T C scaffold1438 Both SNP 0002.scaffold00003 101896 1 T G scaffold1438 Both SNP 0002.scaffold00003 101905 1 A C scaffold1438 ScafM SNP 0002.scaffold00003 101931 1 C T scaffold1438 ScafM INDEL 0002.scaffold00003 102026 2 TT .G scaffold1438 Both SNP 0002.scaffold00003 102101 1 C G scaffold1438 ReadM SNP 0002.scaffold00003 102773 1 C T - ReadM SNP 0002.scaffold00003 102778 1 G A - ReadM SNP 0002.scaffold00003 103206 1 A C - ScafM INDEL 0002.scaffold00003 104335 1 . A scaffold3742 ScafM SNP 0002.scaffold00003 104423 2 TG CA scaffold3742 ScafM SNP 0002.scaffold00003 104430 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 104434 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 104449 2 TG CA scaffold3742 ScafM SNP 0002.scaffold00003 104454 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 105717 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 105777 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 105784 2 .. AC scaffold3742 ScafM SNP 0002.scaffold00003 105785 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 105788 1 . C scaffold3742 ScafM INDEL 0002.scaffold00003 105791 1 . A scaffold3742 ScafM SNP 0002.scaffold00003 105814 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 105827 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 105876 2 TG AA scaffold3742 ScafM SNP 0002.scaffold00003 105903 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 105937 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 105971 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 105990 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 106011 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 106035 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 106039 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 106066 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 106077 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 106085 1 A G scaffold3742 ReadM SNP 0002.scaffold00003 107760 1 A C - ReadM SNP 0002.scaffold00003 107808 1 A C - ReadM SNP 0002.scaffold00003 107811 1 C A - ReadM SNP 0002.scaffold00003 107913 1 G C - ReadM SNP 0002.scaffold00003 107918 1 T C - ReadM SNP 0002.scaffold00003 108240 1 G A - ReadM SNP 0002.scaffold00003 109395 1 G C - ScafM SNP 0002.scaffold00003 110307 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 110337 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 110355 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 110360 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 110391 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 110403 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 110421 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 110428 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 110447 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 110467 1 A G scaffold3742 ReadM INDEL 0002.scaffold00003 111681 2 .. AA - ScafM SNP 0002.scaffold00003 112094 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 112135 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 112156 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 112184 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 112194 1 T A scaffold3742 ScafM INDEL 0002.scaffold00003 112201 1 . C scaffold3742 ScafM SNP 0002.scaffold00003 112234 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 112244 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 114406 1 T C scaffold2274 ScafM SNP 0002.scaffold00003 114492 1 C A scaffold2274 ScafM SNP 0002.scaffold00003 114504 1 A G scaffold2274 ScafM SNP 0002.scaffold00003 114552 1 G A scaffold2274 ScafM SNP 0002.scaffold00003 114596 1 G T scaffold2274 ScafM INDEL 0002.scaffold00003 114614 1 A . scaffold2274 ScafM INDEL 0002.scaffold00003 114618 1 G . scaffold2274 ScafM INDEL 0002.scaffold00003 114620 1 G . scaffold2274 ScafM SNP 0002.scaffold00003 114622 1 T A scaffold2274 ScafM INDEL 0002.scaffold00003 114626 10 TGATGCCATT .......... scaffold2274 ScafM SNP 0002.scaffold00003 124102 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 124114 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 124137 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 124186 1 G . scaffold3742 ScafM SNP 0002.scaffold00003 124189 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 124209 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 124219 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 124237 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 124249 1 G A scaffold3742 ReadM SNP 0002.scaffold00003 125814 1 A C - ReadM SNP 0002.scaffold00003 125853 1 T C - ReadM INDEL 0002.scaffold00003 126234 3 ... TTA - ReadM SNP 0002.scaffold00003 127000 1 T A - ReadM SNP 0002.scaffold00003 127021 1 G T - ReadM SNP 0002.scaffold00003 127175 1 A C - ReadM SNP 0002.scaffold00003 127226 1 T C - ScafM SNP 0002.scaffold00003 129256 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 129266 2 AC GT scaffold3742 ScafM SNP 0002.scaffold00003 129298 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 129327 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 129352 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 129370 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 129381 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 129403 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 129407 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 129420 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 129452 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 129457 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 129497 1 A G scaffold3742 ScafM INDEL 0002.scaffold00003 129511 1 G . scaffold3742 ScafM SNP 0002.scaffold00003 129580 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 129611 2 GG AA scaffold3742 ScafM INDEL 0002.scaffold00003 129633 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 129652 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 129670 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 129875 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 129906 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 129922 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 129941 2 AC .. scaffold3742 ScafM SNP 0002.scaffold00003 129944 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130005 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 130007 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130014 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130024 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 130039 2 AA TG scaffold3742 ScafM SNP 0002.scaffold00003 130057 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 130092 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130096 2 TT CA scaffold3742 ScafM SNP 0002.scaffold00003 130128 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 130133 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 130175 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 130194 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130223 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130303 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130306 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 130315 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 130332 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 130335 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130363 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 130371 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130377 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130390 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 130391 2 .. TT scaffold3742 ScafM SNP 0002.scaffold00003 130461 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 130477 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130492 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 130494 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 130509 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130552 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130554 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 130596 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 130626 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 130633 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 130650 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 130655 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 130675 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 130686 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 130688 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 130695 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 130730 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130742 1 C A scaffold3742 ScafM INDEL 0002.scaffold00003 130749 3 AGC ..T scaffold3742 ScafM SNP 0002.scaffold00003 130761 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130793 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130874 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130887 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 130920 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 130930 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 130984 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 130991 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 131020 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 131039 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 131041 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 131082 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 131084 2 GG AT scaffold3742 ScafM SNP 0002.scaffold00003 131096 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131377 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 131389 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 131409 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 131432 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 131464 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 131499 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 131537 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 131542 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131561 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 131611 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131686 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 131692 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 131712 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 131716 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 131724 2 TA CT scaffold3742 ScafM INDEL 0002.scaffold00003 131749 4 GTAG .... scaffold3742 ScafM SNP 0002.scaffold00003 131790 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 131834 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 131849 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 131890 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 131892 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131899 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131904 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 131925 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 131938 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 131989 1 A G scaffold3742 ScafM INDEL 0002.scaffold00003 132020 1 . C scaffold3742 ScafM SNP 0002.scaffold00003 132029 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 132039 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 132089 1 C A scaffold3742 ScafM INDEL 0002.scaffold00003 132112 5 ATTAA ..... scaffold3742 ScafM SNP 0002.scaffold00003 132118 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 132138 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 132154 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 132180 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 132213 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 132222 1 A C scaffold3742 ScafM INDEL 0002.scaffold00003 132228 2 CC .. scaffold3742 ScafM SNP 0002.scaffold00003 132233 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 132242 4 .... CATG scaffold3742 ScafM SNP 0002.scaffold00003 132251 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 132263 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 132280 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 132312 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 132317 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 132340 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 132369 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 132388 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 132483 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 132486 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 132510 2 TG CT scaffold3742 ScafM SNP 0002.scaffold00003 132518 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 132539 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 132582 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 134712 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 134749 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 134782 1 . A scaffold3742 ScafM SNP 0002.scaffold00003 134818 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 134849 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 134852 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 134881 2 GG TA scaffold3742 ScafM SNP 0002.scaffold00003 134923 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 134926 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 134934 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 134944 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 134947 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 136799 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 136818 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 136839 2 CC TT scaffold3742 ScafM SNP 0002.scaffold00003 136842 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 136888 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 136913 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 136926 2 AT GG scaffold3742 ScafM SNP 0002.scaffold00003 136938 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 136950 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 137008 2 AT TG scaffold3742 ScafM INDEL 0002.scaffold00003 137015 3 ... CTG scaffold3742 ScafM INDEL 0002.scaffold00003 137017 2 .. AC scaffold3742 ScafM SNP 0002.scaffold00003 137030 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 137046 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 137142 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 137166 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 137176 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 137203 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 137220 1 T . scaffold3742 ScafM INDEL 0002.scaffold00003 137227 4 .... TTTT scaffold3742 ScafM SNP 0002.scaffold00003 137481 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 137517 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 137524 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 137543 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 137558 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 137634 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 137641 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 137658 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 137700 1 A G scaffold3742 ScafM INDEL 0002.scaffold00003 137760 5 ..... ATTAA scaffold3742 ScafM SNP 0002.scaffold00003 137840 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 137851 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 137853 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 137893 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 137907 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 137931 1 G A scaffold3742 Both SNP 0002.scaffold00003 138048 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138092 1 T A scaffold3742 ScafM INDEL 0002.scaffold00003 138120 3 ATT ... scaffold3742 ScafM SNP 0002.scaffold00003 138131 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 138133 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138136 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138148 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 138184 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138226 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 138277 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 138332 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 138340 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 138352 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 138380 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 138404 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 138426 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138460 2 CT AC scaffold3742 ReadM SNP 0002.scaffold00003 138512 1 C A - ReadM SNP 0002.scaffold00003 138521 1 A G - ReadM SNP 0002.scaffold00003 138596 1 C T - ReadM SNP 0002.scaffold00003 138600 1 G A - ScafM SNP 0002.scaffold00003 138724 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138783 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 138790 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 138792 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 138806 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 138808 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 138836 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 138844 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 138866 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 138868 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 139855 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 139862 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 139883 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 139926 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 139928 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 139946 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 139950 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 139967 1 C G scaffold3742 ScafM INDEL 0002.scaffold00003 140030 1 A . scaffold3742 ScafM SNP 0002.scaffold00003 140034 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 140077 2 TG CT scaffold3742 ScafM SNP 0002.scaffold00003 140082 2 TA CG scaffold3742 ScafM SNP 0002.scaffold00003 140118 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 140124 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 140139 2 TA CG scaffold3742 ScafM SNP 0002.scaffold00003 140156 2 CC TT scaffold3742 ScafM SNP 0002.scaffold00003 140171 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 140179 1 A G scaffold3742 ScafM INDEL 0002.scaffold00003 140191 4 ATAT .... scaffold3742 ScafM SNP 0002.scaffold00003 140225 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 140286 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 140294 2 AG TT scaffold3742 ScafM SNP 0002.scaffold00003 140335 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 140347 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 140380 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 140402 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 140429 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 140435 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 140459 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 140475 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 140501 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 140506 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 140528 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 140617 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 140621 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 140635 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 140644 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 140693 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 140723 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 140736 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 140742 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 140778 1 T A scaffold3742 ReadM INDEL 0002.scaffold00003 141735 1 . A - ReadM SNP 0002.scaffold00003 141744 1 T A - ReadM SNP 0002.scaffold00003 141776 1 A T - ReadM SNP 0002.scaffold00003 141806 1 A G - ReadM SNP 0002.scaffold00003 141854 1 A G - Both SNP 0002.scaffold00003 142031 1 T C scaffold3742 Both SNP 0002.scaffold00003 142074 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 142103 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 142111 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 142131 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 142169 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 142337 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 142340 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 152557 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 152563 1 G A scaffold3742 ReadM SNP 0002.scaffold00003 152852 1 T A - Both SNP 0002.scaffold00003 152934 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 152958 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 152989 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 153016 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 153058 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 153078 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 153085 2 GG AA scaffold3742 ScafM SNP 0002.scaffold00003 153124 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 159366 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159389 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 159419 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159425 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 159443 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 159446 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 159459 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159471 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 159538 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 159540 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 159583 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 159604 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159631 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 159642 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 159683 3 CAA ACG scaffold3742 ScafM SNP 0002.scaffold00003 159688 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159754 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 159759 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 159761 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 159777 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 159820 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 159854 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 159884 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 159887 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 159912 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 159934 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 159949 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 159975 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 159978 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 159995 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 160032 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 160035 2 .A TG scaffold3742 ScafM INDEL 0002.scaffold00003 160054 2 .. AA scaffold3742 ScafM SNP 0002.scaffold00003 160056 2 TT GC scaffold3742 ScafM SNP 0002.scaffold00003 160065 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 160090 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 160116 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 160936 1 G A scaffold1652 ScafM SNP 0002.scaffold00003 160959 1 C A scaffold1652 ScafM SNP 0002.scaffold00003 161006 1 A T scaffold1652 ScafM SNP 0002.scaffold00003 161009 1 A G scaffold1652 ScafM SNP 0002.scaffold00003 161014 1 T A scaffold1652 ScafM SNP 0002.scaffold00003 161024 1 C G scaffold1652 ScafM SNP 0002.scaffold00003 161491 1 A C scaffold3742 ScafM INDEL 0002.scaffold00003 161544 7 ....... GAGAAAG scaffold3742 ScafM SNP 0002.scaffold00003 161625 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 161631 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 161641 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 161684 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 161686 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 161694 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 161709 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 161713 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 161719 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 161737 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 161744 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 161754 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 161760 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 161763 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 161790 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 161839 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 161905 1 G A scaffold3742 Both SNP 0002.scaffold00003 161975 1 C T scaffold3742 Both SNP 0002.scaffold00003 162027 1 T G scaffold3742 ScafM INDEL 0002.scaffold00003 162067 22 TAGGCCAACAATCAGTCTACTT ...................... scaffold3742 ScafM INDEL 0002.scaffold00003 162090 2 AT .. scaffold3742 ScafM SNP 0002.scaffold00003 162134 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162144 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 162176 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162179 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 162198 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 162205 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 162237 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 162250 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162289 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 162291 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 162300 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 162328 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162330 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162366 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 162379 2 GT AG scaffold3742 ScafM INDEL 0002.scaffold00003 162416 9 AAGACCCAA ......... scaffold3742 ScafM INDEL 0002.scaffold00003 162429 1 T . scaffold3742 Both SNP 0002.scaffold00003 162468 1 A C scaffold3742 Both SNP 0002.scaffold00003 162478 1 A G scaffold3742 Both SNP 0002.scaffold00003 162523 1 A T scaffold3742 Both SNP 0002.scaffold00003 162585 1 G A scaffold3742 Both SNP 0002.scaffold00003 162598 1 A T scaffold3742 Both INDEL 0002.scaffold00003 162616 1 A . scaffold3742 ScafM SNP 0002.scaffold00003 162649 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 162660 1 A C scaffold3742 ScafM INDEL 0002.scaffold00003 162665 3 TTA ... scaffold3742 ScafM INDEL 0002.scaffold00003 162670 2 AC .. scaffold3742 Both SNP 0002.scaffold00003 162741 1 A T scaffold3742 Both SNP 0002.scaffold00003 162773 1 A G scaffold3742 Both SNP 0002.scaffold00003 162837 1 G C scaffold3742 Both SNP 0002.scaffold00003 163001 1 T C scaffold3742 Both SNP 0002.scaffold00003 163014 1 C A scaffold3742 Both SNP 0002.scaffold00003 163042 1 A G scaffold3742 Both SNP 0002.scaffold00003 163074 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 163261 1 . A scaffold3742 ScafM INDEL 0002.scaffold00003 163292 8 GAATTGTA ........ scaffold3742 ScafM SNP 0002.scaffold00003 163305 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 163320 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 163342 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 163362 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 163436 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 163549 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 163551 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 163569 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 163646 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 163721 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 163733 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 163783 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 163808 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 163966 1 C A scaffold3742 ScafM INDEL 0002.scaffold00003 163974 1 . T scaffold3742 ScafM INDEL 0002.scaffold00003 163988 1 . T scaffold3742 ScafM SNP 0002.scaffold00003 164040 1 G C scaffold3742 ScafM SNP 0002.scaffold00003 164043 1 C T scaffold3742 ReadM SNP 0002.scaffold00003 164469 1 T G - ScafM INDEL 0002.scaffold00003 164639 4 AAAT .... scaffold3742 ScafM SNP 0002.scaffold00003 164678 1 T A scaffold3742 ScafM INDEL 0002.scaffold00003 164746 2 AA .. scaffold3742 ScafM INDEL 0002.scaffold00003 164840 2 .. AT scaffold3742 ScafM SNP 0002.scaffold00003 164896 1 T A scaffold3742 ScafM INDEL 0002.scaffold00003 164899 2 .. TG scaffold3742 ScafM SNP 0002.scaffold00003 164901 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 164931 3 AAT ... scaffold3742 ScafM INDEL 0002.scaffold00003 164939 1 . A scaffold3742 ScafM SNP 0002.scaffold00003 164945 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 165066 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 165138 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 165157 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 165165 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 165203 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 165240 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 165327 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 165344 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 165814 1 A G scaffold3742 ScafM INDEL 0002.scaffold00003 165818 1 A . scaffold3742 ScafM SNP 0002.scaffold00003 165826 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 165871 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 165874 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 165890 2 AG TT scaffold3742 ScafM SNP 0002.scaffold00003 165895 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 165933 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 165941 1 . T scaffold3742 ScafM SNP 0002.scaffold00003 166010 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 166033 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 166038 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 166044 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 166205 1 G T scaffold3742 ScafM INDEL 0002.scaffold00003 166211 1 . A scaffold3742 ScafM SNP 0002.scaffold00003 166227 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 166243 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 166511 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 166618 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 166641 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 166663 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 166673 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 169698 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 169735 1 G C scaffold3742 Both SNP 0002.scaffold00003 169813 1 G A scaffold3742 Both SNP 0002.scaffold00003 169817 1 A G scaffold3742 Both SNP 0002.scaffold00003 169877 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 169946 1 . C scaffold3742 ScafM SNP 0002.scaffold00003 169962 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 169993 1 . C scaffold3742 ScafM INDEL 0002.scaffold00003 170027 1 . A scaffold3742 ScafM INDEL 0002.scaffold00003 170035 5 ..... GGAAT scaffold3742 ScafM INDEL 0002.scaffold00003 170036 1 . A scaffold3742 ScafM INDEL 0002.scaffold00003 170037 1 . A scaffold3742 ScafM INDEL 0002.scaffold00003 170051 2 .. TT scaffold3742 ScafM INDEL 0002.scaffold00003 170053 3 ... CCT scaffold3742 ScafM SNP 0002.scaffold00003 170055 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 170065 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170075 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 170081 1 C A scaffold3742 ScafM SNP 0002.scaffold00003 170105 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 170125 1 . G scaffold3742 ScafM INDEL 0002.scaffold00003 170126 2 .C TG scaffold3742 ScafM INDEL 0002.scaffold00003 170133 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 170136 1 T A scaffold3742 ScafM INDEL 0002.scaffold00003 170152 2 .. AA scaffold3742 ScafM SNP 0002.scaffold00003 170154 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 170159 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 170167 2 GT TG scaffold3742 ScafM SNP 0002.scaffold00003 170175 1 T G scaffold3742 ScafM INDEL 0002.scaffold00003 170182 13 ............. AGTTGAAGAAATG scaffold3742 ScafM SNP 0002.scaffold00003 170219 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 170223 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 170260 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 170282 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 170300 2 AT GA scaffold3742 ScafM SNP 0002.scaffold00003 170352 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170371 1 T G scaffold3742 ScafM INDEL 0002.scaffold00003 170378 4 ATGC .... scaffold3742 ScafM SNP 0002.scaffold00003 170404 2 GA TT scaffold3742 ScafM SNP 0002.scaffold00003 170409 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 170435 2 TC .. scaffold3742 ScafM SNP 0002.scaffold00003 170438 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 170450 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170461 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170463 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 170483 8 ........ ATAAGACT scaffold3742 ScafM SNP 0002.scaffold00003 170506 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 170529 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 170563 2 AC .. scaffold3742 ScafM INDEL 0002.scaffold00003 170587 5 ATCAG ..... scaffold3742 ScafM SNP 0002.scaffold00003 170663 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 170677 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170908 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 170952 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 170987 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 171002 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 171051 1 T G scaffold3742 ScafM INDEL 0002.scaffold00003 171053 2 .. AC scaffold3742 ScafM SNP 0002.scaffold00003 171082 1 G A scaffold3742 ScafM INDEL 0002.scaffold00003 171087 1 . T scaffold3742 ScafM SNP 0002.scaffold00003 171092 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 171107 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 171131 1 C G scaffold3742 ScafM SNP 0002.scaffold00003 171157 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 171166 1 A T scaffold3742 ScafM SNP 0002.scaffold00003 171172 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 171195 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 171197 1 A C scaffold3742 ScafM SNP 0002.scaffold00003 171200 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 171229 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 171277 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 171307 1 T C scaffold3742 ScafM INDEL 0002.scaffold00003 171330 12 ............ TTCAGGTTCAGG scaffold3742 ScafM SNP 0002.scaffold00003 171565 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 171575 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 171646 3 AGT ... scaffold3742 ScafM SNP 0002.scaffold00003 171753 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 171969 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 172057 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 172070 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 172086 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 172106 1 A C scaffold3742 ReadM SNP 0002.scaffold00003 172418 1 G A - ReadM SNP 0002.scaffold00003 172511 1 T C - ReadM SNP 0002.scaffold00003 172693 1 T A - ReadM SNP 0002.scaffold00003 172707 1 G T - Both SNP 0002.scaffold00003 172766 1 T C scaffold3742 Both SNP 0002.scaffold00003 172816 1 A T scaffold3742 Both INDEL 0002.scaffold00003 172886 1 . C scaffold3742 Both SNP 0002.scaffold00003 173052 1 T C scaffold3742 Both SNP 0002.scaffold00003 173096 1 A C scaffold3742 Both SNP 0002.scaffold00003 173335 1 C T scaffold3742 Both INDEL 0002.scaffold00003 173364 1 . G scaffold3742 Both INDEL 0002.scaffold00003 173478 3 ATT ... scaffold3742 ReadM SNP 0002.scaffold00003 173716 1 A G - ReadM SNP 0002.scaffold00003 173774 1 C A - ReadM SNP 0002.scaffold00003 173882 1 A G - ReadM SNP 0002.scaffold00003 174082 1 T C - ReadM SNP 0002.scaffold00003 174133 1 G A - ReadM INDEL 0002.scaffold00003 174138 1 A . - ReadM SNP 0002.scaffold00003 174187 1 T G - ReadM SNP 0002.scaffold00003 174211 1 T G - ReadM SNP 0002.scaffold00003 174260 1 C A - ReadM SNP 0002.scaffold00003 174279 1 T G - ReadM SNP 0002.scaffold00003 174297 1 C T - ReadM SNP 0002.scaffold00003 174392 1 C A - ReadM SNP 0002.scaffold00003 174395 1 G T - Both SNP 0002.scaffold00003 174511 1 G T scaffold3742 ScafM SNP 0002.scaffold00003 174635 1 C T scaffold3742 ScafM INDEL 0002.scaffold00003 174640 3 TGA ... scaffold3742 Both SNP 0002.scaffold00003 174728 1 G C scaffold3742 Both SNP 0002.scaffold00003 174733 1 T C scaffold3742 Both SNP 0002.scaffold00003 174821 1 A G scaffold3742 Both SNP 0002.scaffold00003 174857 1 T G scaffold3742 ScafM SNP 0002.scaffold00003 175065 1 T A scaffold3742 ScafM SNP 0002.scaffold00003 175068 1 A T scaffold3742 Both SNP 0002.scaffold00003 175097 1 T A scaffold3742 Both SNP 0002.scaffold00003 175161 1 A C scaffold3742 ReadM SNP 0002.scaffold00003 175257 1 C A - ReadM SNP 0002.scaffold00003 175387 1 G A - ReadM SNP 0002.scaffold00003 175517 1 G T - Both SNP 0002.scaffold00003 175601 1 C G scaffold3742 Both SNP 0002.scaffold00003 175620 1 T A scaffold3742 ReadM INDEL 0002.scaffold00003 175723 1 C . - ReadM SNP 0002.scaffold00003 175823 1 C G - ReadM SNP 0002.scaffold00003 175871 1 T C - ReadM SNP 0002.scaffold00003 175946 1 T C - ReadM SNP 0002.scaffold00003 175995 1 C T - ReadM SNP 0002.scaffold00003 176047 1 C T - ReadM SNP 0002.scaffold00003 176092 1 T C - ReadM SNP 0002.scaffold00003 176137 1 C T - Both SNP 0002.scaffold00003 176297 1 G A scaffold3742 Both SNP 0002.scaffold00003 176384 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 177113 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 177125 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 177180 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 177183 1 G A scaffold3742 Both SNP 0002.scaffold00003 177216 1 G A scaffold3742 Both SNP 0002.scaffold00003 177281 1 G A scaffold3742 Both SNP 0002.scaffold00003 177300 1 A T scaffold3742 ScafM INDEL 0002.scaffold00003 177404 1 A . scaffold3742 Both SNP 0002.scaffold00003 177423 1 G A scaffold3742 Both SNP 0002.scaffold00003 177536 1 T A scaffold3742 Both SNP 0002.scaffold00003 177637 1 T C scaffold3742 Both SNP 0002.scaffold00003 177655 1 C A scaffold3742 Both INDEL 0002.scaffold00003 177856 1 T . scaffold3742 ScafM SNP 0002.scaffold00003 177919 1 T G scaffold3742 ScafM INDEL 0002.scaffold00003 177983 1 C . scaffold3742 Both SNP 0002.scaffold00003 178012 1 T A scaffold3742 Both SNP 0002.scaffold00003 178020 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 178052 1 T C scaffold3742 ReadM SNP 0002.scaffold00003 179477 1 A G - ReadM SNP 0002.scaffold00003 179489 1 T G - ReadM SNP 0002.scaffold00003 179780 1 G A - Both SNP 0002.scaffold00003 179887 1 C T scaffold3742 ReadM SNP 0002.scaffold00003 180050 1 C A - ReadM SNP 0002.scaffold00003 180199 1 G A - Both SNP 0002.scaffold00003 180240 1 A G scaffold3742 ReadM SNP 0002.scaffold00003 180363 1 C G - ReadM SNP 0002.scaffold00003 180723 1 G A - ReadM SNP 0002.scaffold00003 180759 1 G A - ReadM INDEL 0002.scaffold00003 180817 1 . A - ReadM SNP 0002.scaffold00003 180869 1 T C - ReadM SNP 0002.scaffold00003 181002 1 C A - ReadM SNP 0002.scaffold00003 181011 1 C T - ReadM INDEL 0002.scaffold00003 181044 1 T . - ReadM SNP 0002.scaffold00003 181102 1 C T - ReadM SNP 0002.scaffold00003 181266 1 C T - ReadM SNP 0002.scaffold00003 181355 1 G A - ReadM SNP 0002.scaffold00003 181401 1 G C - ReadM SNP 0002.scaffold00003 181461 1 A G - ReadM SNP 0002.scaffold00003 181546 1 T A - ReadM INDEL 0002.scaffold00003 181571 1 . A - ScafM SNP 0002.scaffold00003 185473 1 T G scaffold5630 ScafM SNP 0002.scaffold00003 185484 1 T A scaffold5630 ScafM SNP 0002.scaffold00003 185584 1 A G scaffold5630 ScafM SNP 0002.scaffold00003 185672 1 A G scaffold5630 ScafM SNP 0002.scaffold00003 185679 1 A T scaffold5630 ScafM SNP 0002.scaffold00003 185689 1 A C scaffold5630 ScafM SNP 0002.scaffold00003 185754 1 G C scaffold5630 ReadM SNP 0002.scaffold00003 193054 1 G C - ReadM SNP 0002.scaffold00003 193168 1 A G - ReadM SNP 0002.scaffold00003 193240 1 A C - ReadM SNP 0002.scaffold00003 193332 1 A G - ReadM SNP 0002.scaffold00003 196551 1 C A - ReadM SNP 0002.scaffold00003 196588 1 C G - ReadM SNP 0002.scaffold00003 196633 1 G C - ReadM SNP 0002.scaffold00003 196813 1 T C - ReadM SNP 0002.scaffold00003 196876 1 G C - ReadM SNP 0002.scaffold00003 196889 1 C T - ReadM SNP 0002.scaffold00003 196952 1 T C - ReadM SNP 0002.scaffold00003 197173 1 G C - ReadM SNP 0002.scaffold00003 197556 1 C A - ReadM SNP 0002.scaffold00003 197576 1 A G - ReadM SNP 0002.scaffold00003 197729 1 G A - ReadM SNP 0002.scaffold00003 197765 1 G A - ReadM SNP 0002.scaffold00003 197889 1 G A - ScafM SNP 0002.scaffold00003 197902 1 G A scaffold31438 ScafM SNP 0002.scaffold00003 197967 2 GG AA scaffold31438 ScafM SNP 0002.scaffold00003 197979 1 C G scaffold31438 ScafM SNP 0002.scaffold00003 197990 1 T G scaffold31438 ScafM SNP 0002.scaffold00003 197993 1 A G scaffold31438 ScafM SNP 0002.scaffold00003 197998 1 T G scaffold31438 ScafM SNP 0002.scaffold00003 198037 1 G A scaffold31438 ScafM INDEL 0002.scaffold00003 198058 2 .T GA scaffold31438 ScafM SNP 0002.scaffold00003 198061 1 G T scaffold31438 ScafM SNP 0002.scaffold00003 198073 1 C T scaffold31438 ScafM SNP 0002.scaffold00003 198078 1 A G scaffold31438 ScafM SNP 0002.scaffold00003 198783 1 T C scaffold3742 ScafM SNP 0002.scaffold00003 198874 1 T C scaffold3742 ReadM SNP 0002.scaffold00003 199073 1 T C - ReadM SNP 0002.scaffold00003 199139 1 C T - ReadM SNP 0002.scaffold00003 199268 1 C T - ReadM SNP 0002.scaffold00003 199389 1 C G - ReadM SNP 0002.scaffold00003 199406 1 C A - ReadM SNP 0002.scaffold00003 199458 1 T C - ReadM SNP 0002.scaffold00003 199561 1 A G - ReadM SNP 0002.scaffold00003 199640 1 T C - ReadM SNP 0002.scaffold00003 199761 1 A G - ReadM SNP 0002.scaffold00003 199764 1 T C - ReadM SNP 0002.scaffold00003 199770 1 T A - ReadM SNP 0002.scaffold00003 199888 1 G A - ReadM SNP 0002.scaffold00003 199914 1 A T - ReadM SNP 0002.scaffold00003 200019 1 G A - ReadM SNP 0002.scaffold00003 200112 1 G A - ReadM SNP 0002.scaffold00003 200128 1 C T - ScafM SNP 0002.scaffold00003 200242 1 C T scaffold3742 ScafM SNP 0002.scaffold00003 200248 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 200256 1 G A scaffold3742 ScafM SNP 0002.scaffold00003 200288 1 A G scaffold3742 ScafM SNP 0002.scaffold00003 200297 1 A G scaffold3742 ReadM SNP 0002.scaffold00003 200827 1 A G - ReadM SNP 0002.scaffold00003 200849 1 C A - ScafM SNP 0002.scaffold00003 201465 1 A C scaffold16549 ScafM SNP 0002.scaffold00003 201489 1 G A scaffold16549 ScafM SNP 0002.scaffold00003 201520 1 A G scaffold16549 ScafM SNP 0002.scaffold00003 201522 1 T C scaffold16549 ScafM SNP 0002.scaffold00003 201546 1 G A scaffold16549 ReadM SNP 0002.scaffold00003 201817 1 G A - ReadM SNP 0002.scaffold00003 201921 1 G A - ReadM SNP 0002.scaffold00003 201969 1 C T - ReadM SNP 0002.scaffold00003 201974 1 T C - ReadM SNP 0002.scaffold00003 202014 1 C A - ReadM SNP 0002.scaffold00003 202058 1 A G - ReadM SNP 0002.scaffold00003 202061 1 C A - ReadM INDEL 0002.scaffold00003 202092 1 C . - ReadM SNP 0002.scaffold00003 202122 1 C A - ReadM SNP 0002.scaffold00003 202211 1 C G - ReadM SNP 0002.scaffold00003 202221 1 A T - ReadM SNP 0002.scaffold00003 202289 1 A T - ReadM SNP 0002.scaffold00003 202353 1 G A - ReadM SNP 0002.scaffold00003 202392 1 C A - ReadM SNP 0002.scaffold00003 202481 1 A G - ReadM SNP 0002.scaffold00003 202515 1 T A - ReadM SNP 0002.scaffold00003 202823 1 G A - ReadM SNP 0002.scaffold00003 202834 1 T G - ReadM SNP 0002.scaffold00003 202867 1 T C - ReadM SNP 0002.scaffold00003 202958 1 T C - ReadM SNP 0002.scaffold00003 202968 1 G C - ReadM SNP 0002.scaffold00003 203148 1 T C - ReadM SNP 0002.scaffold00003 203563 1 G A - ReadM SNP 0002.scaffold00003 203656 1 C T - ReadM SNP 0002.scaffold00003 203674 1 T C - ReadM SNP 0002.scaffold00003 203753 1 G T - ReadM SNP 0002.scaffold00003 203882 1 T G - ReadM SNP 0002.scaffold00003 203921 1 A G - ReadM SNP 0002.scaffold00003 204002 1 T G - ReadM SNP 0002.scaffold00003 204015 1 C T - ReadM SNP 0002.scaffold00003 204096 1 A G - ReadM SNP 0002.scaffold00003 204309 1 T G - ReadM SNP 0002.scaffold00003 204457 1 C T - ReadM SNP 0002.scaffold00003 204467 1 G A - ReadM SNP 0002.scaffold00003 204566 1 A G - ReadM SNP 0002.scaffold00003 204611 1 C G - ReadM SNP 0002.scaffold00003 204704 1 A T - ReadM SNP 0002.scaffold00003 204714 1 A C - ReadM SNP 0002.scaffold00003 204813 1 G T - ReadM SNP 0002.scaffold00003 204857 1 C G - ReadM SNP 0002.scaffold00003 204908 1 A C - ReadM SNP 0002.scaffold00003 204939 1 C T - ReadM SNP 0002.scaffold00003 205184 1 A G - ReadM SNP 0002.scaffold00003 205206 1 A G - ReadM SNP 0002.scaffold00003 205228 1 A T - ReadM SNP 0002.scaffold00003 205384 1 G A - ReadM INDEL 0002.scaffold00003 205449 1 . T - ReadM SNP 0002.scaffold00003 205516 1 T G - ReadM SNP 0002.scaffold00003 205554 1 C T - ReadM SNP 0002.scaffold00003 205846 1 G T - ReadM SNP 0002.scaffold00003 205935 1 T A - ReadM SNP 0002.scaffold00003 206036 1 C A - ReadM SNP 0002.scaffold00003 206041 1 A T - ReadM SNP 0002.scaffold00003 206077 1 T G - ReadM SNP 0002.scaffold00003 206123 1 G C - ReadM SNP 0002.scaffold00003 206412 1 T C - ReadM SNP 0002.scaffold00003 206427 1 C T - ReadM SNP 0002.scaffold00003 206448 1 C T - ReadM SNP 0002.scaffold00003 206488 1 C G - ReadM SNP 0002.scaffold00003 206571 1 C T - ReadM SNP 0002.scaffold00003 206589 1 A T - ReadM SNP 0002.scaffold00003 206712 1 G A - ReadM SNP 0002.scaffold00003 206871 1 G C - ReadM SNP 0002.scaffold00003 206946 1 G A - ReadM SNP 0002.scaffold00003 206949 1 T C - ReadM SNP 0002.scaffold00003 207050 1 T C - ReadM SNP 0002.scaffold00003 207166 1 A C - ReadM SNP 0002.scaffold00003 207311 1 G T - ReadM SNP 0002.scaffold00003 207355 1 C T - ReadM SNP 0002.scaffold00003 207359 1 T G - ReadM SNP 0002.scaffold00003 207513 1 T A - ReadM SNP 0002.scaffold00003 207628 1 C T - ReadM SNP 0002.scaffold00003 207647 1 G A - ReadM SNP 0002.scaffold00003 207659 1 T C - ReadM SNP 0002.scaffold00003 207679 1 T C - ReadM SNP 0002.scaffold00003 207758 1 T A - ReadM SNP 0002.scaffold00003 207943 1 C G - ReadM SNP 0002.scaffold00003 208022 1 G T - ReadM SNP 0002.scaffold00003 208071 1 G T - ReadM SNP 0002.scaffold00003 208143 1 C T - ReadM SNP 0002.scaffold00003 208288 1 A C - ReadM SNP 0002.scaffold00003 208347 1 G A - ReadM SNP 0002.scaffold00003 208413 2 AC GT - ReadM INDEL 0002.scaffold00003 208432 1 A . - ReadM SNP 0002.scaffold00003 208586 1 C T - ReadM SNP 0002.scaffold00003 208630 1 G A - ReadM SNP 0002.scaffold00003 208667 1 T C - ReadM SNP 0002.scaffold00003 208679 1 A C - ReadM SNP 0002.scaffold00003 208840 1 T C - ReadM SNP 0002.scaffold00003 208964 1 G T - ReadM SNP 0002.scaffold00003 209196 1 A G - ReadM SNP 0002.scaffold00003 209285 1 C T - ReadM SNP 0002.scaffold00003 209368 1 C A - ReadM SNP 0002.scaffold00003 209399 1 T G - ReadM SNP 0002.scaffold00003 209441 1 A G - ReadM SNP 0002.scaffold00003 209504 1 A G - ReadM SNP 0002.scaffold00003 209858 1 T C - ReadM SNP 0002.scaffold00003 209866 1 A G - ReadM SNP 0002.scaffold00003 210058 1 T C - ReadM SNP 0002.scaffold00003 210160 1 T A - Both SNP 0002.scaffold00003 210356 1 C A scaffold23321 Both SNP 0002.scaffold00003 210409 1 T G scaffold23321 ScafM SNP 0002.scaffold00003 210430 2 TG AA scaffold23321 Both SNP 0002.scaffold00003 210488 1 C G scaffold23321 Both SNP 0002.scaffold00003 210543 1 G T scaffold23321 Both INDEL 0002.scaffold00003 210653 3 ... CGT scaffold23321 Both SNP 0002.scaffold00003 210774 1 C T scaffold23321 Both SNP 0002.scaffold00003 210951 1 G A scaffold23321 ScafM INDEL 0002.scaffold00003 210970 1 . A scaffold23321 Both SNP 0002.scaffold00003 211002 1 T A scaffold23321 Both SNP 0002.scaffold00003 211054 1 A G scaffold23321 Both SNP 0002.scaffold00003 211111 1 A G scaffold23321 Both SNP 0002.scaffold00003 211299 1 G A scaffold23321 Both SNP 0002.scaffold00003 211335 1 C T scaffold23321 ScafM SNP 0002.scaffold00003 211357 2 CC AA scaffold23321 Both SNP 0002.scaffold00003 211398 1 C T scaffold23321 Both SNP 0002.scaffold00003 211486 1 C T scaffold23321 Both SNP 0002.scaffold00003 211600 1 A C scaffold23321 Both SNP 0002.scaffold00003 211641 1 A T scaffold23321 Both SNP 0002.scaffold00003 211669 1 C T scaffold23321 ScafM SNP 0002.scaffold00003 211712 1 A C scaffold23321 ScafM SNP 0002.scaffold00003 211714 1 G A scaffold23321 Both INDEL 0002.scaffold00003 211783 1 . A scaffold23321 Both SNP 0002.scaffold00003 211902 1 T C scaffold23321 Both SNP 0002.scaffold00003 211968 1 A G scaffold23321 Both INDEL 0002.scaffold00003 211986 1 . A scaffold23321 Both SNP 0002.scaffold00003 212293 1 A G scaffold23321 Both SNP 0002.scaffold00003 212298 1 A C scaffold23321 Both SNP 0002.scaffold00003 212426 1 C T scaffold23321 Both SNP 0002.scaffold00003 212432 1 C T scaffold23321 Both SNP 0002.scaffold00003 212531 1 G A scaffold23321 Both SNP 0002.scaffold00003 212563 1 C T scaffold23321 ScafM SNP 0002.scaffold00003 212870 1 A G scaffold23321 ScafM SNP 0002.scaffold00003 212893 1 T C scaffold23321 ScafM SNP 0002.scaffold00003 212968 1 G A scaffold23321 Both SNP 0002.scaffold00003 213032 1 G C scaffold23321 Both SNP 0002.scaffold00003 213052 1 C A scaffold23321 Both SNP 0002.scaffold00003 213139 1 G T scaffold23321 Both SNP 0002.scaffold00003 213150 1 G A scaffold23321 Both SNP 0002.scaffold00003 213338 1 C G scaffold23321 Both SNP 0002.scaffold00003 213473 1 G C scaffold23321 Both SNP 0002.scaffold00003 213488 1 C G scaffold23321 Both SNP 0002.scaffold00003 213559 1 A G scaffold23321 Both SNP 0002.scaffold00003 213563 1 C G scaffold23321 Both SNP 0002.scaffold00003 213855 1 T A scaffold23321 ScafM SNP 0002.scaffold00003 213880 1 G A scaffold23321 ScafM SNP 0002.scaffold00003 213893 1 T G scaffold23321 ScafM SNP 0002.scaffold00003 213967 1 T C scaffold23321 ScafM SNP 0002.scaffold00003 213971 1 T G scaffold23321 ScafM SNP 0002.scaffold00003 213980 1 C G scaffold23321 ScafM SNP 0002.scaffold00003 213982 1 A C scaffold23321 ScafM SNP 0002.scaffold00003 214121 1 T C scaffold23321 ScafM SNP 0002.scaffold00003 214123 1 G A scaffold23321 ReadM INDEL 0002.scaffold00003 214180 1 . T - ReadM SNP 0002.scaffold00003 214243 1 T C - ReadM SNP 0002.scaffold00003 214300 1 G T - ReadM SNP 0002.scaffold00003 214356 1 T G - ReadM SNP 0002.scaffold00003 214553 1 T C - ReadM SNP 0002.scaffold00003 214691 1 A T - ReadM SNP 0002.scaffold00003 214843 1 G A - ReadM SNP 0002.scaffold00003 214905 1 T C - ReadM SNP 0002.scaffold00003 214983 1 T C - ReadM SNP 0002.scaffold00003 215008 1 T A - ReadM SNP 0002.scaffold00003 215125 1 C G - ReadM SNP 0002.scaffold00003 215158 1 T C - ReadM INDEL 0002.scaffold00003 215215 2 .. AA - ReadM SNP 0002.scaffold00003 215243 1 G T - ReadM SNP 0002.scaffold00003 215278 1 C G - ReadM SNP 0002.scaffold00003 215305 1 G A - ReadM SNP 0002.scaffold00003 215485 1 C G - ReadM SNP 0002.scaffold00003 215519 1 T C - ReadM SNP 0002.scaffold00003 215644 1 C G - ReadM SNP 0002.scaffold00003 215696 1 G C - ReadM SNP 0002.scaffold00003 215727 1 C T - ReadM SNP 0002.scaffold00003 215751 1 A G - ReadM SNP 0002.scaffold00003 215771 1 T C - ReadM SNP 0002.scaffold00003 215783 1 A T - ReadM SNP 0002.scaffold00003 215800 1 C G - ReadM INDEL 0002.scaffold00003 215881 2 TA .. - ReadM SNP 0002.scaffold00003 216014 1 C A - ReadM SNP 0002.scaffold00003 216388 1 A T - ReadM SNP 0002.scaffold00003 216443 1 T C - ReadM SNP 0002.scaffold00003 216456 1 G A - ReadM SNP 0002.scaffold00003 216476 1 G A - ReadM INDEL 0002.scaffold00003 216569 2 AG .. - ScafM SNP 0002.scaffold00003 217168 1 A T scaffold23321 ReadM SNP 0002.scaffold00003 217460 1 A C - ReadM INDEL 0002.scaffold00003 217467 1 . A - ReadM SNP 0002.scaffold00003 217495 1 G A - ReadM SNP 0002.scaffold00003 217546 1 C T - ReadM SNP 0002.scaffold00003 217548 1 A G - Both SNP 0002.scaffold00003 217659 1 A G scaffold23321 ReadM SNP 0002.scaffold00003 217702 1 C T - ReadM SNP 0002.scaffold00003 217713 1 A G - ReadM SNP 0002.scaffold00003 217919 1 A G - ReadM SNP 0002.scaffold00003 217951 1 G T - ReadM SNP 0002.scaffold00003 218037 1 A G - ReadM SNP 0002.scaffold00003 218102 1 A G - ReadM SNP 0002.scaffold00003 218111 1 A C - ReadM SNP 0002.scaffold00003 218133 1 C G - ReadM SNP 0002.scaffold00003 218379 1 G A - ReadM SNP 0002.scaffold00003 218470 1 A G - ReadM SNP 0002.scaffold00003 218596 1 G A - ReadM SNP 0002.scaffold00003 218722 1 A T - ReadM SNP 0002.scaffold00003 218774 2 TA CG - ReadM SNP 0002.scaffold00003 218851 1 T C - ReadM SNP 0002.scaffold00003 218873 1 A G - ReadM SNP 0002.scaffold00003 218964 1 G A - ReadM SNP 0002.scaffold00003 219098 1 G A - ReadM SNP 0002.scaffold00003 219174 1 A G - ReadM SNP 0002.scaffold00003 219276 1 T G - ReadM SNP 0002.scaffold00003 219470 1 C G - ReadM SNP 0002.scaffold00003 219713 1 A C - ReadM SNP 0002.scaffold00003 219784 1 C T - ReadM SNP 0002.scaffold00003 219786 1 A G - ReadM SNP 0002.scaffold00003 219822 1 T G - ReadM SNP 0002.scaffold00003 220159 1 T C - ReadM SNP 0002.scaffold00003 220300 1 G C - ReadM SNP 0002.scaffold00003 220376 1 G A - ReadM SNP 0002.scaffold00003 220398 1 C T - ReadM SNP 0002.scaffold00003 220513 1 A C - ReadM SNP 0002.scaffold00003 220547 1 G A - ReadM SNP 0002.scaffold00003 220602 1 T A - ReadM SNP 0002.scaffold00003 220635 1 A G - ReadM INDEL 0002.scaffold00003 220684 3 ATT ... - ReadM SNP 0002.scaffold00003 220827 1 T G - ReadM SNP 0002.scaffold00003 220864 1 T C - ReadM INDEL 0002.scaffold00003 220892 1 T . - ReadM SNP 0002.scaffold00003 220913 1 G A - ReadM SNP 0002.scaffold00003 221060 1 G A - ReadM SNP 0002.scaffold00003 221105 1 T A - ReadM SNP 0002.scaffold00003 221126 1 T C - ReadM SNP 0002.scaffold00003 221181 1 G A - ReadM SNP 0002.scaffold00003 221343 1 G T - ReadM SNP 0002.scaffold00003 221429 1 A C - ReadM SNP 0002.scaffold00003 221433 1 A T - ReadM SNP 0002.scaffold00003 221448 1 G C - ReadM SNP 0002.scaffold00003 221605 1 T C - ReadM SNP 0002.scaffold00003 221632 1 T C - ReadM SNP 0002.scaffold00003 221687 1 A C - ReadM SNP 0002.scaffold00003 221809 1 A T - ReadM INDEL 0002.scaffold00003 221811 1 . A - ReadM SNP 0002.scaffold00003 221849 1 G T - ReadM SNP 0002.scaffold00003 221887 1 G A - ReadM SNP 0002.scaffold00003 221900 1 C T - ReadM SNP 0002.scaffold00003 222019 1 C T - ReadM SNP 0002.scaffold00003 222030 1 C A - ReadM SNP 0002.scaffold00003 222094 1 A C - ReadM SNP 0002.scaffold00003 222189 1 A G - ReadM SNP 0002.scaffold00003 222224 1 G C - ReadM SNP 0002.scaffold00003 222228 1 G A - ReadM SNP 0002.scaffold00003 222239 1 C A - ReadM SNP 0002.scaffold00003 222307 1 T A - ReadM SNP 0002.scaffold00003 222311 1 T C - ReadM INDEL 0002.scaffold00003 222459 3 ... TAA - Both SNP 0002.scaffold00003 222571 1 A C scaffold23321 Both SNP 0002.scaffold00003 222589 1 G A scaffold23321 ReadM SNP 0002.scaffold00003 222664 1 T C - ReadM SNP 0002.scaffold00003 222716 1 A G - ScafM INDEL 0002.scaffold00003 224325 5 ..... ATTAA scaffold23321 ScafM SNP 0002.scaffold00003 224344 1 G C scaffold23321 ScafM SNP 0002.scaffold00003 224390 1 C G scaffold23321 ScafM SNP 0002.scaffold00003 224395 1 C T scaffold23321 ScafM SNP 0002.scaffold00003 224407 1 G C scaffold23321 ScafM SNP 0002.scaffold00003 224647 1 A G scaffold23321 Both SNP 0002.scaffold00003 224774 1 T A scaffold23321 Both SNP 0002.scaffold00003 224790 1 A G scaffold23321 Both SNP 0002.scaffold00003 225051 1 G A scaffold23321 Both SNP 0002.scaffold00003 225093 1 A C scaffold23321 Both SNP 0002.scaffold00003 225198 1 A C scaffold23321 Both SNP 0002.scaffold00003 225202 1 A T scaffold23321 Both SNP 0002.scaffold00003 225321 1 A C scaffold23321 Both SNP 0002.scaffold00003 225403 1 C T scaffold23321 Both SNP 0002.scaffold00003 225440 1 T C scaffold23321 Both SNP 0002.scaffold00003 225452 1 G A scaffold23321 ScafM SNP 0002.scaffold00003 225545 1 T C scaffold23321 ReadM SNP 0002.scaffold00003 227143 1 G A - ScafM SNP 0002.scaffold00003 227675 1 A G scaffold22048 ScafM SNP 0002.scaffold00003 228480 1 G T scaffold22048 ScafM INDEL 0002.scaffold00003 229228 1 . A scaffold22048 ScafM SNP 0002.scaffold00003 229421 2 GG AA scaffold133 ScafM SNP 0002.scaffold00003 229431 1 A C scaffold133 ScafM SNP 0002.scaffold00003 229445 1 A T scaffold133 ScafM SNP 0002.scaffold00003 229449 2 TT AG scaffold133 ScafM SNP 0002.scaffold00003 229454 1 A G scaffold133 ScafM SNP 0002.scaffold00003 229467 1 A G scaffold133 ScafM SNP 0002.scaffold00003 229470 1 G A scaffold133 ScafM SNP 0002.scaffold00003 229485 1 G A scaffold133 ScafM SNP 0002.scaffold00003 229488 1 T G scaffold133 ScafM SNP 0002.scaffold00003 229494 1 T G scaffold133 ScafM SNP 0002.scaffold00003 229501 2 TT GC scaffold133 ScafM SNP 0002.scaffold00003 229819 1 T C scaffold22048 Both SNP 0002.scaffold00003 230281 1 A G scaffold22048 Both SNP 0002.scaffold00003 231356 1 T A scaffold22048 ScafM SNP 0002.scaffold00003 231588 1 G A scaffold22048 ScafM SNP 0002.scaffold00003 231814 1 G T scaffold22048 ScafM SNP 0002.scaffold00003 233147 1 T A scaffold22048 ScafM INDEL 0002.scaffold00003 233646 1 T . scaffold22017 Both SNP 0002.scaffold00003 234065 1 T A scaffold22017 ReadM SNP 0002.scaffold00003 236879 1 G A - ReadM SNP 0002.scaffold00003 237093 1 T A - ReadM SNP 0002.scaffold00003 237368 1 G C - Both SNP 0002.scaffold00003 237510 1 C T scaffold1560 ReadM SNP 0002.scaffold00003 237868 1 T C - ReadM SNP 0002.scaffold00003 237980 1 T A - ReadM SNP 0002.scaffold00003 239557 1 A G - ReadM SNP 0002.scaffold00003 239606 1 G C - Both INDEL 0002.scaffold00003 239938 1 T . scaffold1560 Both SNP 0002.scaffold00003 240738 1 T A scaffold1560 ReadM SNP 0002.scaffold00003 240844 1 C T - ReadM SNP 0002.scaffold00003 240943 1 T C - ReadM SNP 0002.scaffold00003 241288 1 C T - Both SNP 0002.scaffold00003 242226 1 A C scaffold1560 Both SNP 0002.scaffold00003 243908 1 T C scaffold1560 Both INDEL 0002.scaffold00003 244089 2 TG .. scaffold1560 Both INDEL 0002.scaffold00003 245900 1 T . scaffold1560 Both SNP 0002.scaffold00003 246275 1 T G scaffold1560 ReadM SNP 0002.scaffold00003 247208 1 T C - Both SNP 0002.scaffold00003 247269 1 A T scaffold1560 ReadM SNP 0002.scaffold00003 247400 1 A G - ReadM SNP 0002.scaffold00003 248208 1 A C - ReadM SNP 0002.scaffold00003 249031 1 T A - Both INDEL 0002.scaffold00003 250635 2 .. AC scaffold1560 ScafM INDEL 0002.scaffold00003 252092 1 . T scaffold1560 Both SNP 0002.scaffold00003 253826 1 T A scaffold1560 Both SNP 0002.scaffold00003 253935 1 G A scaffold1560 Both SNP 0002.scaffold00003 254057 1 G T scaffold1560 Both SNP 0002.scaffold00003 255822 1 C T scaffold1560 Both SNP 0002.scaffold00003 256197 1 A G scaffold1560 Both SNP 0002.scaffold00003 258631 1 T C scaffold1560 ScafM INDEL 0002.scaffold00003 259655 1 . A scaffold1560 Both SNP 0002.scaffold00003 260312 1 G T scaffold1560 Both SNP 0002.scaffold00003 263009 1 G A scaffold1560 ScafM INDEL 0002.scaffold00003 263725 1 . T scaffold1560 Both SNP 0002.scaffold00003 265590 1 C T scaffold1560 Both SNP 0002.scaffold00003 265635 1 A G scaffold1560 Both SNP 0002.scaffold00003 265672 1 A G scaffold1560 Both SNP 0002.scaffold00003 267087 1 T C scaffold1560 ReadM SNP 0002.scaffold00003 268518 1 C A - ReadM SNP 0002.scaffold00003 268704 1 C T - ReadM SNP 0002.scaffold00003 270868 1 T C - ReadM SNP 0002.scaffold00003 271426 1 A C - ReadM SNP 0002.scaffold00003 271650 1 G A - Both SNP 0002.scaffold00003 271968 1 G A scaffold1560 Both SNP 0002.scaffold00003 272068 1 A G scaffold1560 Both SNP 0002.scaffold00003 273127 1 A G scaffold1560 Both SNP 0002.scaffold00003 273665 1 A G scaffold1560 Both SNP 0002.scaffold00003 274036 1 A G scaffold1560 Both SNP 0002.scaffold00003 274301 1 A G scaffold1560 Both SNP 0002.scaffold00003 274463 1 T G scaffold1560 Both SNP 0002.scaffold00003 275813 1 C T scaffold1560 ReadM SNP 0002.scaffold00003 278318 1 T A - ReadM SNP 0002.scaffold00003 278665 1 T G - ReadM SNP 0002.scaffold00003 280514 1 T A - ReadM SNP 0002.scaffold00003 280561 1 G A - ReadM SNP 0002.scaffold00003 281217 1 C T - ReadM INDEL 0002.scaffold00003 282446 1 . T - ReadM INDEL 0002.scaffold00003 282604 1 . A - ReadM INDEL 0002.scaffold00003 282719 1 . A - ReadM SNP 0002.scaffold00003 284748 1 T C - ReadM INDEL 0002.scaffold00003 285537 1 . T - ReadM SNP 0002.scaffold00003 286020 1 T A - ReadM SNP 0002.scaffold00003 287076 1 G T - ScafM INDEL 0002.scaffold00003 287517 1 . T scaffold1560 Both SNP 0002.scaffold00003 287563 1 T C scaffold1560 ReadM SNP 0002.scaffold00003 290035 1 G A - Both SNP 0002.scaffold00003 290613 1 T C scaffold1560 ReadM SNP 0002.scaffold00003 290940 1 A G - ReadM SNP 0002.scaffold00003 291085 1 C T - ReadM SNP 0002.scaffold00003 291242 1 C T - ReadM SNP 0002.scaffold00003 295137 1 A G - ReadM SNP 0002.scaffold00003 295199 1 A G - ReadM SNP 0002.scaffold00003 295752 1 A G - ReadM SNP 0002.scaffold00003 295771 1 T C - ReadM SNP 0002.scaffold00003 297609 1 G A - ScafM SNP 0002.scaffold00003 299535 1 C T scaffold1560 Both SNP 0002.scaffold00003 300175 1 C T scaffold1560 ReadM SNP 0002.scaffold00003 300710 1 T A - ReadM SNP 0002.scaffold00003 301735 1 A T - ReadM SNP 0002.scaffold00003 302083 1 C T - ReadM SNP 0002.scaffold00003 302133 1 C T - ReadM SNP 0002.scaffold00003 302148 1 G A - ReadM SNP 0002.scaffold00003 302708 1 G A - Both SNP 0002.scaffold00003 302881 1 T G scaffold1560 Both SNP 0002.scaffold00003 303443 1 T A scaffold1560 Both SNP 0002.scaffold00003 303856 1 A C scaffold1560 Both SNP 0002.scaffold00003 304394 1 C T scaffold1560 Both INDEL 0002.scaffold00003 304430 1 C . scaffold1560 Both SNP 0002.scaffold00003 304946 1 T A scaffold1560 ScafM INDEL 0002.scaffold00003 305552 31 ............................... GCTTGTAATGTTGGCTAGGTTGGGGGGGGGG scaffold1560 ScafM SNP 0002.scaffold00003 305690 1 C T scaffold1560 Both SNP 0002.scaffold00003 306091 1 G T scaffold1560 ReadM SNP 0002.scaffold00003 306617 1 T A - Both SNP 0002.scaffold00003 307174 1 G A scaffold1560 Both INDEL 0002.scaffold00003 307749 1 . G scaffold1560 Both SNP 0002.scaffold00003 308337 1 A G scaffold1560 ReadM SNP 0002.scaffold00003 308854 1 C G - ReadM SNP 0002.scaffold00003 308950 1 A G - ReadM SNP 0002.scaffold00003 309160 1 T C - ReadM SNP 0002.scaffold00003 309492 1 A T - ReadM SNP 0002.scaffold00003 310510 1 T A - ReadM SNP 0002.scaffold00003 310642 1 C T - ReadM SNP 0002.scaffold00003 310770 1 T G - ReadM SNP 0002.scaffold00003 313059 1 C T - ReadM INDEL 0002.scaffold00003 313839 1 C . - ReadM SNP 0002.scaffold00003 315715 1 A G - Both SNP 0002.scaffold00003 316806 1 T C scaffold1560 ReadM SNP 0002.scaffold00003 316923 1 G A - ReadM SNP 0002.scaffold00003 317571 1 C G - ReadM SNP 0002.scaffold00003 318050 1 C G - ReadM SNP 0002.scaffold00003 318290 1 T A - ReadM SNP 0002.scaffold00003 318670 1 A T - ReadM SNP 0002.scaffold00003 323530 1 T A - ReadM SNP 0002.scaffold00003 325467 1 C G - ReadM INDEL 0002.scaffold00003 325518 1 C . - ReadM SNP 0002.scaffold00003 325730 1 T G - ScafM INDEL 0002.scaffold00003 325930 4 TGCA .... scaffold1560 ReadM SNP 0002.scaffold00003 326882 1 A G - ReadM SNP 0002.scaffold00003 326913 1 A G - ReadM SNP 0002.scaffold00003 327044 1 G A - ReadM SNP 0002.scaffold00003 328653 1 G C - ReadM SNP 0002.scaffold00003 328687 1 A G - ReadM SNP 0002.scaffold00003 328827 1 T C - ReadM SNP 0002.scaffold00003 329163 1 G A - ReadM SNP 0002.scaffold00003 330307 1 C T - ReadM SNP 0002.scaffold00003 333491 1 G T - ReadM SNP 0002.scaffold00003 333620 1 A G - ReadM SNP 0002.scaffold00003 334239 1 T C - ScafM SNP 0002.scaffold00003 334459 1 C T scaffold1560 ReadM SNP 0002.scaffold00003 338538 1 G C - Both SNP 0002.scaffold00003 339595 1 A T scaffold1560 ReadM SNP 0002.scaffold00003 340041 1 G C - Both SNP 0002.scaffold00003 340475 1 T G scaffold1560 Both SNP 0002.scaffold00003 340644 1 A C scaffold1560 ReadM SNP 0002.scaffold00003 341083 1 C T - ReadM SNP 0002.scaffold00003 342363 1 C T - ReadM SNP 0002.scaffold00003 342731 1 A G - Both SNP 0002.scaffold00003 343627 1 C G scaffold1560 ScafM SNP 0002.scaffold00003 344599 1 A T scaffold1560 ScafM SNP 0002.scaffold00003 345767 1 C A scaffold1560 ScafM INDEL 0002.scaffold00003 346588 2 .. AA scaffold1560 Both INDEL 0002.scaffold00003 348471 3 ... TAA scaffold1560 ScafM SNP 0002.scaffold00003 349810 1 T G scaffold1560 ReadM SNP 0002.scaffold00003 351318 1 C T - Both SNP 0002.scaffold00003 352259 1 G T scaffold1560 Both SNP 0002.scaffold00003 354656 1 A C scaffold1560 ReadM SNP 0002.scaffold00003 356341 1 C T - ReadM SNP 0002.scaffold00003 356827 1 C T - ReadM SNP 0002.scaffold00003 358310 1 A T - Both SNP 0002.scaffold00003 358604 1 A G scaffold1560 ScafM INDEL 0002.scaffold00003 358761 9 ......... ATATATAAA scaffold1560 Both SNP 0002.scaffold00003 359802 1 A C scaffold1560 ScafM INDEL 0002.scaffold00003 359926 1 . A scaffold1560 ReadM INDEL 0002.scaffold00003 360746 1 . T - ScafM INDEL 0002.scaffold00003 360746 2 .C TG scaffold1560 Both INDEL 0002.scaffold00003 360797 1 . A scaffold1560 ReadM SNP 0002.scaffold00003 362255 1 G A - ReadM SNP 0002.scaffold00003 362794 1 T G - ReadM SNP 0002.scaffold00003 364368 1 A G - ReadM SNP 0002.scaffold00003 364730 1 A G - ReadM SNP 0002.scaffold00003 365262 1 C T - Both SNP 0002.scaffold00003 365635 1 T G scaffold1560 ScafM INDEL 0002.scaffold00003 366232 1 A . scaffold1560 ReadM INDEL 0002.scaffold00003 366776 1 . T - ScafM INDEL 0002.scaffold00003 368371 1 A . scaffold1560 ReadM SNP 0002.scaffold00003 368528 1 G A - ScafM SNP 0002.scaffold00003 368900 1 T G scaffold1560 ScafM SNP 0002.scaffold00003 368923 1 G A scaffold1560 ReadM SNP 0002.scaffold00003 370160 1 G A - ReadM SNP 0002.scaffold00003 370226 1 T A - ReadM INDEL 0002.scaffold00003 370252 1 . G - ReadM INDEL 0002.scaffold00003 370897 1 A . - ReadM SNP 0002.scaffold00003 371065 1 G A - Both INDEL 0002.scaffold00003 371612 1 T . scaffold1560 ScafM SNP 0002.scaffold00003 371619 1 T C scaffold1560 ScafM INDEL 0002.scaffold00003 371725 6 ...... TTTTCG scaffold1560 ReadM SNP 0002.scaffold00003 372913 1 T C - ReadM SNP 0002.scaffold00003 373537 1 A G - ReadM INDEL 0002.scaffold00003 374075 1 C . - ScafM INDEL 0002.scaffold00003 374218 5 CCTCT ..... scaffold1560 Both INDEL 0002.scaffold00003 374490 1 . A scaffold1560 Both INDEL 0002.scaffold00003 376374 1 T . scaffold1560 Both SNP 0002.scaffold00003 376603 1 C T scaffold1560 ReadM SNP 0002.scaffold00003 377728 1 G C - ReadM SNP 0002.scaffold00003 378355 1 T C - ReadM SNP 0002.scaffold00003 378825 1 C T - ReadM SNP 0002.scaffold00003 378903 1 G A - ReadM SNP 0002.scaffold00003 379799 1 T A - ReadM SNP 0002.scaffold00003 380643 1 G A - ReadM SNP 0002.scaffold00003 381446 1 C T - ReadM SNP 0002.scaffold00003 381861 1 A G - ReadM SNP 0002.scaffold00003 382494 1 C G - ReadM SNP 0002.scaffold00003 382724 1 T C - ReadM SNP 0002.scaffold00003 383932 1 T C - Both SNP 0002.scaffold00003 384812 1 A C scaffold1560 ScafM SNP 0002.scaffold00003 386927 1 G A scaffold1560 Both SNP 0002.scaffold00003 387052 1 T C scaffold1560 Both SNP 0002.scaffold00003 387445 1 C T scaffold1560 Both SNP 0002.scaffold00003 389368 1 A G scaffold1560 Both SNP 0002.scaffold00003 389957 1 G A scaffold1560 Both SNP 0002.scaffold00003 389978 1 T G scaffold1560 ScafM SNP 0002.scaffold00003 390718 1 T A scaffold1560 ScafM INDEL 0002.scaffold00003 392024 3 ... TTG scaffold1560 ScafM SNP 0002.scaffold00003 392484 1 C T scaffold1560 ScafM SNP 0002.scaffold00003 394441 1 T A scaffold1560 ReadM INDEL 0002.scaffold00003 395390 1 . G - ReadM SNP 0002.scaffold00003 395786 1 T C - ReadM SNP 0002.scaffold00003 395788 1 A G - ReadM SNP 0002.scaffold00003 399796 1 T A - ReadM SNP 0002.scaffold00003 402383 1 G A - Both SNP 0002.scaffold00003 402716 1 T A scaffold6355 ReadM SNP 0002.scaffold00003 404102 1 G C - ReadM SNP 0002.scaffold00003 405398 1 C T - ReadM SNP 0002.scaffold00003 406185 1 T C - ReadM INDEL 0002.scaffold00003 406489 1 T . - ReadM SNP 0002.scaffold00003 406533 1 T A - Both SNP 0002.scaffold00003 407874 1 A G scaffold6355 ReadM SNP 0002.scaffold00003 408619 1 G A - Both SNP 0002.scaffold00003 408686 1 A G scaffold6355 ReadM SNP 0002.scaffold00003 409417 1 T C - Both SNP 0002.scaffold00003 410463 1 G A scaffold6355 Both SNP 0002.scaffold00003 410896 1 T A scaffold6355 ReadM SNP 0002.scaffold00003 411643 1 C T - ReadM SNP 0002.scaffold00003 412974 1 C T - ReadM SNP 0002.scaffold00003 413063 1 G A - ReadM SNP 0002.scaffold00003 413788 1 G A - Both SNP 0002.scaffold00003 414606 1 C G scaffold6355 Both SNP 0002.scaffold00003 415515 1 G A scaffold6355 ReadM SNP 0002.scaffold00003 416626 1 A G - Both SNP 0002.scaffold00003 416930 1 G T scaffold6355 ReadM SNP 0002.scaffold00003 417406 1 C T - Both SNP 0002.scaffold00003 417931 1 T C scaffold6355 ReadM INDEL 0002.scaffold00003 419648 1 G . - ReadM SNP 0002.scaffold00003 420121 1 A T - ReadM SNP 0002.scaffold00003 420371 1 G A - ReadM SNP 0002.scaffold00003 420424 1 T A - ReadM SNP 0002.scaffold00003 422395 1 C T - Both SNP 0002.scaffold00003 424217 1 G A scaffold6355 ReadM SNP 0002.scaffold00003 425010 1 A G - ReadM SNP 0002.scaffold00003 425058 1 C T - ReadM SNP 0002.scaffold00003 425801 1 A T - Both SNP 0002.scaffold00003 425876 1 T A scaffold6355 ReadM INDEL 0002.scaffold00003 426383 2 .. GC - ReadM SNP 0002.scaffold00003 427498 1 G A - ReadM SNP 0002.scaffold00003 428307 1 T C - ReadM SNP 0002.scaffold00003 428534 1 A G - ReadM SNP 0002.scaffold00003 429106 1 A C - ReadM SNP 0002.scaffold00003 429515 1 G A - ReadM SNP 0002.scaffold00003 429798 1 A G - ScafM INDEL 0002.scaffold00003 429911 1 . T scaffold6355 Both SNP 0002.scaffold00003 429940 1 G A scaffold6355 Both SNP 0002.scaffold00003 430219 1 G A scaffold6355 Both SNP 0002.scaffold00003 430224 1 C A scaffold6355 Both SNP 0002.scaffold00003 430351 1 A C scaffold6355 ScafM SNP 0002.scaffold00003 431291 2 TC CA scaffold6355 ScafM SNP 0002.scaffold00003 433534 1 C G scaffold6355 Both SNP 0002.scaffold00003 433862 1 T C scaffold6355 ReadM INDEL 0002.scaffold00003 433977 1 . T - ReadM SNP 0002.scaffold00003 434139 1 C G - Both SNP 0002.scaffold00003 434605 1 T C scaffold6355 ScafM INDEL 0002.scaffold00003 434764 1 . A scaffold6355 ReadM SNP 0002.scaffold00003 435620 1 G A - ReadM SNP 0002.scaffold00003 435827 1 T G - ReadM SNP 0002.scaffold00003 435860 1 A G - ReadM SNP 0002.scaffold00003 438516 1 T G - Both SNP 0002.scaffold00003 440361 1 G T scaffold6355 ReadM SNP 0002.scaffold00003 441119 1 A G - Both SNP 0002.scaffold00003 441994 1 T C scaffold6355 Both SNP 0002.scaffold00003 443568 1 T C scaffold6355 ReadM SNP 0002.scaffold00003 444588 1 A C - ReadM SNP 0002.scaffold00003 446725 1 C T - Both SNP 0002.scaffold00003 447692 1 T C scaffold6355 ReadM SNP 0002.scaffold00003 447921 1 T G - ReadM SNP 0002.scaffold00003 448046 1 G C - ReadM SNP 0002.scaffold00003 448203 1 A G - ReadM SNP 0002.scaffold00003 448210 1 C T - ReadM INDEL 0002.scaffold00003 455944 1 A . - ReadM SNP 0002.scaffold00003 459352 1 G T - ReadM SNP 0002.scaffold00003 459493 1 A G - ReadM SNP 0002.scaffold00003 460171 1 T G - ReadM SNP 0002.scaffold00003 461029 1 C T - ReadM SNP 0002.scaffold00003 463874 1 T G - ReadM SNP 0002.scaffold00003 464267 1 A G - ReadM SNP 0002.scaffold00003 469071 1 C A - ReadM SNP 0002.scaffold00003 469854 1 T C - ReadM SNP 0002.scaffold00003 470278 1 T C - ReadM SNP 0002.scaffold00003 470374 1 G T - ReadM SNP 0002.scaffold00003 470737 1 A G - ScafM INDEL 0002.scaffold00003 471247 1 T . scaffold5667 ReadM SNP 0002.scaffold00003 475797 1 C A - ReadM SNP 0002.scaffold00003 475932 1 G T - ReadM SNP 0002.scaffold00003 477898 1 G A - ReadM SNP 0002.scaffold00003 479311 1 A T - ReadM SNP 0002.scaffold00003 479349 1 T A - ReadM SNP 0002.scaffold00003 481979 1 C T - ReadM SNP 0002.scaffold00003 482278 1 C T - ReadM SNP 0002.scaffold00003 482477 1 T C - ReadM SNP 0002.scaffold00003 482870 1 C T - Both SNP 0002.scaffold00003 483611 1 G A scaffold1701 ReadM SNP 0002.scaffold00003 484250 2 AG TC - ReadM SNP 0002.scaffold00003 485108 1 T C - ReadM SNP 0002.scaffold00003 485181 1 C T - Both SNP 0002.scaffold00003 486297 1 G A scaffold1701 Both SNP 0002.scaffold00003 486376 1 T C scaffold1701 ReadM INDEL 0002.scaffold00003 489373 2 .. TC - ReadM SNP 0002.scaffold00003 489609 1 G A - ReadM SNP 0002.scaffold00003 493316 1 A G - ScafM SNP 0002.scaffold00003 495187 1 T C scaffold1701 Both SNP 0002.scaffold00003 499450 1 C T scaffold1701 Both SNP 0002.scaffold00003 500453 1 G T scaffold1701 ScafM INDEL 0002.scaffold00003 501614 1 . C scaffold1701 ReadM SNP 0002.scaffold00003 506208 1 G A - ScafM INDEL 0002.scaffold00003 507776 2 .. AA scaffold1701 ScafM INDEL 0002.scaffold00003 507848 1 T . scaffold1701 ScafM SNP 0002.scaffold00003 510544 1 A C scaffold1701 ScafM INDEL 0002.scaffold00003 510966 3 ... AAA scaffold1701 Both SNP 0002.scaffold00003 511341 1 T G scaffold1701 ReadM SNP 0002.scaffold00003 513218 1 A G - Both SNP 0002.scaffold00003 513707 1 C A scaffold1701 ReadM SNP 0002.scaffold00003 514227 1 G A - Both SNP 0002.scaffold00003 514269 1 A G scaffold1701 ReadM SNP 0002.scaffold00003 514466 1 A G - Both SNP 0002.scaffold00003 515488 1 T A scaffold1701 ReadM SNP 0002.scaffold00003 515647 1 G A - ReadM SNP 0002.scaffold00003 515690 1 C T - ReadM SNP 0002.scaffold00003 516277 1 G T - ReadM INDEL 0002.scaffold00003 517298 1 . C - ReadM INDEL 0002.scaffold00003 517959 1 . T - Both SNP 0002.scaffold00003 518470 1 T A scaffold1701 ScafM SNP 0002.scaffold00003 518857 1 C T scaffold1701 ScafM INDEL 0002.scaffold00003 519530 52 .................................................... CTAATTTCTATTATCTTTGCGGTAAACTTTTGTCTAAGTGGTGGGTGAGACT scaffold1701 Both SNP 0002.scaffold00003 520589 1 C T scaffold1701 ReadM SNP 0002.scaffold00003 524125 1 T C - ReadM SNP 0002.scaffold00003 525469 1 T C - ReadM SNP 0002.scaffold00003 526850 1 A T - ScafM INDEL 0002.scaffold00003 527785 1 T . scaffold1701 ReadM SNP 0002.scaffold00003 528605 1 T C - ScafM SNP 0002.scaffold00003 529022 1 T G scaffold1701 Both SNP 0002.scaffold00003 530144 1 T G scaffold1701 ScafM INDEL 0002.scaffold00003 530307 6 ...... AAAAAA scaffold1701 ScafM SNP 0002.scaffold00003 530492 1 G T scaffold1701 ScafM INDEL 0002.scaffold00003 534886 2 AA .. scaffold32462 ScafM SNP 0002.scaffold00003 534893 1 G A scaffold32462 ScafM SNP 0002.scaffold00003 534963 1 A T scaffold32462 ScafM SNP 0002.scaffold00003 534965 1 T C scaffold32462 ScafM SNP 0002.scaffold00003 548859 1 G T scaffold16254 ScafM SNP 0002.scaffold00003 548914 1 G A scaffold16254 ScafM SNP 0002.scaffold00003 548952 1 G T scaffold16254 ScafM SNP 0002.scaffold00003 548969 1 G T scaffold16254 ScafM SNP 0002.scaffold00003 548991 1 G A scaffold16254 ScafM SNP 0002.scaffold00003 549008 1 C A scaffold16254 ScafM SNP 0002.scaffold00003 549381 1 G A scaffold16254 ScafM INDEL 0002.scaffold00003 549498 18 .................. GGGGGGGGGGGGGGGGGG scaffold16254 ScafM SNP 0002.scaffold00003 549503 1 C T scaffold16254 ScafM SNP 0002.scaffold00003 549510 1 A G scaffold16254 ScafM SNP 0002.scaffold00003 549513 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 549547 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 549601 1 G A scaffold16254 ScafM SNP 0002.scaffold00003 550138 1 A C scaffold16254 Both SNP 0002.scaffold00003 552626 1 A C scaffold16254 ReadM SNP 0002.scaffold00003 555625 1 G A - ReadM SNP 0002.scaffold00003 555960 1 T G - ScafM INDEL 0002.scaffold00003 558820 9 ......... CCCCCCCCC scaffold16254 ScafM INDEL 0002.scaffold00003 559105 2 CC .. scaffold16254 Both SNP 0002.scaffold00003 559585 1 A T scaffold16254 Both SNP 0002.scaffold00003 560110 1 A C scaffold16254 Both SNP 0002.scaffold00003 560373 1 G A scaffold16254 Both SNP 0002.scaffold00003 560647 1 G A scaffold16254 ReadM INDEL 0002.scaffold00003 560655 1 C . - ScafM INDEL 0002.scaffold00003 560655 2 CT .G scaffold16254 ScafM SNP 0002.scaffold00003 560842 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 560876 1 C T scaffold16254 ScafM INDEL 0002.scaffold00003 560881 5 GTTTT ..... scaffold16254 ScafM SNP 0002.scaffold00003 560904 1 G A scaffold16254 ScafM INDEL 0002.scaffold00003 560937 1 T . scaffold16254 ScafM SNP 0002.scaffold00003 561239 1 G A scaffold16254 ScafM SNP 0002.scaffold00003 561242 2 TC CT scaffold16254 ScafM SNP 0002.scaffold00003 561256 1 G A scaffold16254 ScafM SNP 0002.scaffold00003 561282 1 G C scaffold16254 ScafM SNP 0002.scaffold00003 561285 1 G A scaffold16254 Both SNP 0002.scaffold00003 561314 1 C A scaffold16254 ScafM SNP 0002.scaffold00003 561363 1 A T scaffold16254 Both SNP 0002.scaffold00003 561471 1 G C scaffold16254 ScafM SNP 0002.scaffold00003 561499 1 T G scaffold16254 ScafM SNP 0002.scaffold00003 561508 1 A G scaffold16254 ScafM SNP 0002.scaffold00003 561531 1 A G scaffold16254 ScafM SNP 0002.scaffold00003 561533 1 A G scaffold16254 ScafM INDEL 0002.scaffold00003 561564 3 ... GGT scaffold16254 ScafM SNP 0002.scaffold00003 561575 1 C A scaffold16254 ScafM SNP 0002.scaffold00003 561584 1 G T scaffold16254 ScafM SNP 0002.scaffold00003 561597 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 561612 1 T G scaffold16254 ScafM SNP 0002.scaffold00003 561626 1 C T scaffold16254 ScafM INDEL 0002.scaffold00003 561648 2 AA .. scaffold16254 ScafM INDEL 0002.scaffold00003 561675 1 . T scaffold16254 ScafM SNP 0002.scaffold00003 561677 1 C T scaffold16254 ReadM SNP 0002.scaffold00003 561874 1 G A - ReadM INDEL 0002.scaffold00003 562008 1 . A - ReadM SNP 0002.scaffold00003 562054 1 T C - Both SNP 0002.scaffold00003 562177 1 C T scaffold16254 Both SNP 0002.scaffold00003 562279 1 A T scaffold16254 Both SNP 0002.scaffold00003 562292 1 A C scaffold16254 ScafM INDEL 0002.scaffold00003 562308 2 .. AA scaffold16254 ScafM SNP 0002.scaffold00003 562334 1 C T scaffold16254 ScafM SNP 0002.scaffold00003 562457 2 TG CA scaffold16254 ScafM SNP 0002.scaffold00003 562465 1 A T scaffold16254 ScafM SNP 0002.scaffold00003 562483 1 A G scaffold16254 Both SNP 0002.scaffold00003 562730 1 A G scaffold16254 Both SNP 0002.scaffold00003 562765 1 A G scaffold16254 Both INDEL 0002.scaffold00003 562768 1 T . scaffold16254 Both SNP 0002.scaffold00003 562824 1 A G scaffold16254 ScafM SNP 0002.scaffold00003 562886 1 T G scaffold16254 ScafM SNP 0002.scaffold00003 562902 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 562910 1 A G scaffold16254 ScafM SNP 0002.scaffold00003 562930 1 G A scaffold16254 Both SNP 0002.scaffold00003 562998 1 C T scaffold16254 Both SNP 0002.scaffold00003 563030 1 T C scaffold16254 Both SNP 0002.scaffold00003 563141 1 C T scaffold16254 Both SNP 0002.scaffold00003 563233 1 T C scaffold16254 ScafM SNP 0002.scaffold00003 563398 1 G T scaffold16254 Both SNP 0002.scaffold00003 563470 1 C T scaffold16254 Both SNP 0002.scaffold00003 563768 1 C G scaffold16254 Both SNP 0002.scaffold00003 563816 1 G A scaffold16254 Both SNP 0002.scaffold00003 563847 1 T C scaffold16254 Both SNP 0002.scaffold00003 563856 1 T A scaffold16254 Both SNP 0002.scaffold00003 564019 1 G A scaffold16254 Both SNP 0002.scaffold00003 564201 1 G A scaffold16254 Both SNP 0002.scaffold00003 564330 1 A G scaffold16254 ReadM SNP 0002.scaffold00003 564378 1 T C - ReadM SNP 0002.scaffold00003 564395 1 C G - ReadM SNP 0002.scaffold00003 564436 1 A G - ReadM SNP 0002.scaffold00003 564469 1 C T - ReadM SNP 0002.scaffold00003 564521 1 A T - ReadM SNP 0002.scaffold00003 564733 1 A G - ReadM SNP 0002.scaffold00003 564765 1 C T - ReadM SNP 0002.scaffold00003 564846 1 C T - ReadM SNP 0002.scaffold00003 564860 1 C G - ReadM SNP 0002.scaffold00003 564907 1 T C - ReadM SNP 0002.scaffold00003 565029 1 A G - ReadM SNP 0002.scaffold00003 565090 1 A C - ReadM SNP 0002.scaffold00003 565182 1 G A - ReadM SNP 0002.scaffold00003 565236 1 T G - ReadM SNP 0002.scaffold00003 565405 1 C G - ReadM SNP 0002.scaffold00003 565476 1 C T - ReadM SNP 0002.scaffold00003 565540 1 G C - ReadM SNP 0002.scaffold00003 565604 1 C G - ReadM SNP 0002.scaffold00003 565652 1 T C - ReadM SNP 0002.scaffold00003 565678 1 T G - ReadM SNP 0002.scaffold00003 565851 1 G A - ReadM SNP 0002.scaffold00003 565934 1 G A - ReadM INDEL 0002.scaffold00003 565953 2 .. AA - ReadM SNP 0002.scaffold00003 565982 1 A C - ReadM SNP 0002.scaffold00003 566000 1 A G - ReadM SNP 0002.scaffold00003 566097 1 G T - ReadM SNP 0002.scaffold00003 566135 1 G T - ReadM SNP 0002.scaffold00003 566269 1 A G - ReadM SNP 0002.scaffold00003 566316 1 G C - ReadM SNP 0002.scaffold00003 566362 1 A G - ReadM SNP 0002.scaffold00003 566529 1 A G - ReadM SNP 0002.scaffold00003 566540 1 G A - ReadM SNP 0002.scaffold00003 566636 1 G A - ReadM SNP 0002.scaffold00003 567742 1 A C - ReadM SNP 0002.scaffold00003 568137 1 T G - ReadM SNP 0002.scaffold00003 568200 1 G A - ScafM SNP 0002.scaffold00003 568910 1 G C scaffold7873 ScafM INDEL 0002.scaffold00003 569009 1 . A scaffold1360 ScafM INDEL 0002.scaffold00003 569011 1 . A scaffold1360 ScafM SNP 0002.scaffold00003 569014 1 G A scaffold1360 ScafM INDEL 0002.scaffold00003 569015 3 ... TTC scaffold1360 ScafM SNP 0002.scaffold00003 569079 1 A G scaffold1360 ScafM SNP 0002.scaffold00003 569083 2 TC CT scaffold1360 ScafM SNP 0002.scaffold00003 569096 1 C T scaffold1360 ScafM SNP 0002.scaffold00003 569129 1 A T scaffold1360 Both SNP 0002.scaffold00003 569465 1 C T scaffold8339 Both SNP 0002.scaffold00003 569625 1 C T scaffold8339 Both SNP 0002.scaffold00003 569640 1 A G scaffold8339 ScafM SNP 0002.scaffold00003 569709 1 C T scaffold8339 ReadM SNP 0002.scaffold00003 569776 1 A G - ReadM SNP 0002.scaffold00003 569781 1 A C - ReadM SNP 0002.scaffold00003 570442 1 T C - ReadM SNP 0002.scaffold00003 570729 1 T C - ReadM SNP 0002.scaffold00003 571122 1 G C - ReadM SNP 0002.scaffold00003 571624 1 C A - ReadM SNP 0002.scaffold00003 571690 1 G T - ReadM SNP 0002.scaffold00003 571755 1 C T - ReadM SNP 0002.scaffold00003 571813 1 A C - ReadM SNP 0002.scaffold00003 572451 1 G A - ReadM SNP 0002.scaffold00003 572455 1 T A - ReadM SNP 0002.scaffold00003 572627 1 C T - ReadM SNP 0002.scaffold00003 572675 1 T C - ReadM SNP 0002.scaffold00003 572868 2 CG TA - ReadM SNP 0002.scaffold00003 573066 1 T C - ReadM SNP 0002.scaffold00003 573070 1 A G - ReadM SNP 0002.scaffold00003 573303 1 C T - ReadM SNP 0002.scaffold00003 573381 1 G A - ReadM SNP 0002.scaffold00003 573570 1 C G - ReadM SNP 0002.scaffold00003 573634 1 A G - ReadM SNP 0002.scaffold00003 576461 1 G A - ReadM SNP 0002.scaffold00003 576470 1 A G - ReadM SNP 0002.scaffold00003 576543 1 G T - ReadM SNP 0002.scaffold00003 576574 1 C T - ReadM SNP 0002.scaffold00003 576704 1 A G - ReadM SNP 0002.scaffold00003 576754 1 C T - ReadM SNP 0002.scaffold00003 576763 1 A C - ReadM SNP 0002.scaffold00003 576816 1 A G - ReadM SNP 0002.scaffold00003 576862 1 G A - ReadM SNP 0002.scaffold00003 576913 1 T C - ReadM SNP 0002.scaffold00003 577049 1 C T - ReadM SNP 0002.scaffold00003 577080 1 G A - ReadM SNP 0002.scaffold00003 577114 1 A G - ReadM SNP 0002.scaffold00003 577153 1 A C - ReadM SNP 0002.scaffold00003 577188 1 A G - ReadM SNP 0002.scaffold00003 577256 1 A G - ReadM SNP 0002.scaffold00003 577330 1 C T - ReadM SNP 0002.scaffold00003 577351 1 A G - ReadM SNP 0002.scaffold00003 577393 1 A G - ReadM SNP 0002.scaffold00003 577436 1 T C - ReadM SNP 0002.scaffold00003 577652 1 C G - ReadM SNP 0002.scaffold00003 577697 1 A G - ReadM SNP 0002.scaffold00003 577759 1 A G - ReadM SNP 0002.scaffold00003 577793 1 C T - ReadM SNP 0002.scaffold00003 577859 1 A T - ReadM SNP 0002.scaffold00003 577886 1 C A - ReadM SNP 0002.scaffold00003 577940 1 C T - ReadM SNP 0002.scaffold00003 578154 1 A G - ReadM SNP 0002.scaffold00003 578233 1 A G - ReadM SNP 0002.scaffold00003 578238 1 G C - ReadM SNP 0002.scaffold00003 578280 1 C A - ReadM SNP 0002.scaffold00003 578314 1 T G - ReadM SNP 0002.scaffold00003 578344 1 C G - ReadM SNP 0002.scaffold00003 578639 1 G A - ReadM SNP 0002.scaffold00003 578652 1 G A - ReadM SNP 0002.scaffold00003 578681 1 G C - ReadM SNP 0002.scaffold00003 578816 1 C T - ReadM SNP 0002.scaffold00003 578922 1 G C - ReadM SNP 0002.scaffold00003 578953 1 T G - ReadM SNP 0002.scaffold00003 579121 1 C G - ReadM SNP 0002.scaffold00003 579244 1 A G - ReadM SNP 0002.scaffold00003 579313 1 T C - Both SNP 0002.scaffold00003 579392 1 T G scaffold1787 Both SNP 0002.scaffold00003 579394 1 T C scaffold1787 Both SNP 0002.scaffold00003 579438 1 C A scaffold1787 Both SNP 0002.scaffold00003 579513 1 T G scaffold1787 ReadM SNP 0002.scaffold00003 579552 1 A G - ReadM SNP 0002.scaffold00003 579686 1 T C - ReadM SNP 0002.scaffold00003 579763 1 A G - ReadM SNP 0002.scaffold00003 579872 1 G A - ReadM SNP 0002.scaffold00003 579914 1 A G - ReadM SNP 0002.scaffold00003 579942 1 A C - ReadM SNP 0002.scaffold00003 579959 1 A G - ReadM SNP 0002.scaffold00003 579994 1 C A - ReadM SNP 0002.scaffold00003 580201 1 C T - ReadM SNP 0002.scaffold00003 580216 1 A G - Both SNP 0002.scaffold00003 580269 1 C T scaffold1787 Both SNP 0002.scaffold00003 580297 1 C T scaffold1787 ReadM SNP 0002.scaffold00003 580333 1 G C - ReadM SNP 0002.scaffold00003 580466 1 G A - ReadM SNP 0002.scaffold00003 580616 1 T G - ReadM SNP 0002.scaffold00003 580701 1 T C - ReadM SNP 0002.scaffold00003 580765 2 CC GT - ReadM SNP 0002.scaffold00003 580906 1 T G - ReadM SNP 0002.scaffold00003 580962 1 C T - ReadM SNP 0002.scaffold00003 581005 1 A T - ReadM INDEL 0002.scaffold00003 581168 1 . G - ReadM SNP 0002.scaffold00003 581239 1 A G - ReadM SNP 0002.scaffold00003 581278 1 T A - ReadM SNP 0002.scaffold00003 581320 1 G C - ReadM SNP 0002.scaffold00003 581326 1 C A - ReadM SNP 0002.scaffold00003 581355 1 G A - ReadM SNP 0002.scaffold00003 581503 1 G A - Both SNP 0002.scaffold00003 581602 1 T A scaffold1787 Both SNP 0002.scaffold00003 581606 1 C A scaffold1787 ScafM SNP 0002.scaffold00003 581675 1 A T scaffold1787 ScafM SNP 0002.scaffold00003 581827 1 C A scaffold1787 ScafM SNP 0002.scaffold00003 581835 1 T C scaffold1787 ScafM SNP 0002.scaffold00003 581896 1 A G scaffold1787 Both INDEL 0002.scaffold00003 581930 2 AA .. scaffold1787 Both SNP 0002.scaffold00003 581958 1 C T scaffold1787 ReadM SNP 0002.scaffold00003 582155 1 C A - ReadM SNP 0002.scaffold00003 582439 1 C T - ReadM SNP 0002.scaffold00003 582901 1 T A - ReadM SNP 0002.scaffold00003 582905 1 T G - ReadM SNP 0002.scaffold00003 583485 1 C T - ReadM SNP 0002.scaffold00003 583698 1 G A - ReadM SNP 0002.scaffold00003 583934 1 G A - ReadM SNP 0002.scaffold00003 584048 1 C T - ReadM SNP 0002.scaffold00003 584121 1 T G - ReadM SNP 0002.scaffold00003 584239 1 T C - ScafM INDEL 0002.scaffold00003 585878 4 .... TATA scaffold1787 ScafM SNP 0002.scaffold00003 585902 1 G A scaffold1787 Both SNP 0002.scaffold00003 586150 1 A G scaffold1787 ReadM SNP 0002.scaffold00003 586198 1 G C - ReadM SNP 0002.scaffold00003 586275 1 T C - ScafM SNP 0002.scaffold00003 586332 1 G A scaffold1787 ScafM SNP 0002.scaffold00003 586336 2 TG CA scaffold1787 Both SNP 0002.scaffold00003 586384 1 T G scaffold1787 Both SNP 0002.scaffold00003 586402 1 T A scaffold1787 Both SNP 0002.scaffold00003 586428 1 G T scaffold1787 ScafM SNP 0002.scaffold00003 586975 1 T G scaffold1787 ReadM SNP 0002.scaffold00003 587428 1 A C - ReadM SNP 0002.scaffold00003 587657 1 C T - ReadM SNP 0002.scaffold00003 587670 1 C T - ReadM SNP 0002.scaffold00003 587739 1 G A - ReadM SNP 0002.scaffold00003 587810 1 G A - ReadM SNP 0002.scaffold00003 587858 1 G A - ReadM SNP 0002.scaffold00003 587892 1 G A - ReadM SNP 0002.scaffold00003 587894 1 G C - ReadM SNP 0002.scaffold00003 587953 1 C T - ReadM SNP 0002.scaffold00003 588015 1 T C - ReadM SNP 0002.scaffold00003 588047 1 T C - ReadM SNP 0002.scaffold00003 588177 1 A C - ReadM SNP 0002.scaffold00003 588338 1 G C - ReadM SNP 0002.scaffold00003 588358 1 G T - ReadM SNP 0002.scaffold00003 588430 1 A G - ReadM SNP 0002.scaffold00003 588540 1 T C - ReadM SNP 0002.scaffold00003 588556 1 G A - ReadM SNP 0002.scaffold00003 588650 1 C T - ReadM SNP 0002.scaffold00003 588659 1 G A - ReadM SNP 0002.scaffold00003 588738 1 G A - ReadM SNP 0002.scaffold00003 588927 1 G A - ReadM INDEL 0002.scaffold00003 588966 1 A . - ReadM SNP 0002.scaffold00003 589007 1 A G - ReadM SNP 0002.scaffold00003 589020 1 C A - ReadM SNP 0002.scaffold00003 589032 1 C A - ReadM INDEL 0002.scaffold00003 589072 2 .. TC - ReadM SNP 0002.scaffold00003 589226 1 A C - ReadM SNP 0002.scaffold00003 589295 1 T C - ReadM SNP 0002.scaffold00003 589309 1 T C - ReadM SNP 0002.scaffold00003 589406 1 G A - ReadM SNP 0002.scaffold00003 589411 1 C T - ReadM SNP 0002.scaffold00003 589428 1 C T - ReadM SNP 0002.scaffold00003 589512 1 G T - ReadM SNP 0002.scaffold00003 589682 1 A G - ReadM SNP 0002.scaffold00003 589704 1 C T - ReadM SNP 0002.scaffold00003 589822 1 T A - ReadM SNP 0002.scaffold00003 589829 1 C T - ReadM SNP 0002.scaffold00003 589836 1 C T - ReadM SNP 0002.scaffold00003 589942 1 G C - Both SNP 0002.scaffold00003 590038 1 T C scaffold1787 Both SNP 0002.scaffold00003 590072 1 G A scaffold1787 Both SNP 0002.scaffold00003 590110 1 A T scaffold1787 ScafM INDEL 0002.scaffold00003 590157 5 ..... TATAT scaffold1787 Both SNP 0002.scaffold00003 590208 1 A C scaffold1787 Both SNP 0002.scaffold00003 590260 1 A C scaffold1787 ScafM SNP 0002.scaffold00003 590310 2 AA GG scaffold1787 ScafM SNP 0002.scaffold00003 590342 1 A G scaffold1787 ScafM SNP 0002.scaffold00003 590352 1 C T scaffold1787 Both SNP 0002.scaffold00003 590442 1 G A scaffold1787 ScafM SNP 0002.scaffold00003 590711 1 A G scaffold1787 ScafM SNP 0002.scaffold00003 590764 1 T C scaffold1787 Both SNP 0002.scaffold00003 593754 1 C T scaffold1787 Both SNP 0002.scaffold00003 593843 1 C T scaffold1787 Both SNP 0002.scaffold00003 593882 1 T C scaffold1787 ReadM SNP 0002.scaffold00003 594556 1 C T - ReadM INDEL 0002.scaffold00003 594682 1 G . - ReadM SNP 0002.scaffold00003 594694 1 T G - ReadM SNP 0002.scaffold00003 594747 1 C T - Both SNP 0002.scaffold00003 594951 1 C T scaffold1787 Both SNP 0002.scaffold00003 595174 1 C T scaffold1787 Both SNP 0002.scaffold00003 595368 1 T C scaffold1787 Both SNP 0002.scaffold00003 595387 1 A C scaffold1787 Both SNP 0002.scaffold00003 595533 1 A T scaffold1787 ScafM INDEL 0002.scaffold00003 595562 4 TGTT .... scaffold1787 Both SNP 0002.scaffold00003 595649 1 G T scaffold1787 Both SNP 0002.scaffold00003 595853 1 C T scaffold1787 Both SNP 0002.scaffold00003 596002 1 C T scaffold1787 ReadM SNP 0002.scaffold00003 596011 1 G A - ReadM SNP 0002.scaffold00003 596020 1 C T - ReadM SNP 0002.scaffold00003 596042 1 A T - Both SNP 0002.scaffold00003 596423 1 A C scaffold1787 Both SNP 0002.scaffold00003 596630 1 T C scaffold1787 Both SNP 0002.scaffold00003 596712 1 T C scaffold1787 Both SNP 0002.scaffold00003 596837 1 A G scaffold1787 Both SNP 0002.scaffold00003 597044 1 G A scaffold1787 ScafM INDEL 0002.scaffold00003 597066 2 .. CC scaffold1787 Both SNP 0002.scaffold00003 597717 1 C G scaffold1787 Both SNP 0002.scaffold00003 597746 1 C T scaffold1787 Both SNP 0002.scaffold00003 598150 1 A G scaffold1787 Both SNP 0002.scaffold00003 598178 1 A T scaffold1787 Both INDEL 0002.scaffold00003 598367 2 TC .. scaffold1787 Both SNP 0002.scaffold00003 598497 1 C T scaffold1787 Both SNP 0002.scaffold00003 598510 1 C G scaffold1787 ScafM INDEL 0002.scaffold00003 598553 7 ATAGTCT ....... scaffold1787 ScafM INDEL 0002.scaffold00003 598564 2 GC .. scaffold1787 ScafM INDEL 0002.scaffold00003 598567 1 G . scaffold1787 ScafM INDEL 0002.scaffold00003 598570 7 GTGGCAG ....... scaffold1787 ReadM SNP 0002.scaffold00003 598690 1 A G - ReadM SNP 0002.scaffold00003 598821 1 C T - ReadM SNP 0002.scaffold00003 598844 1 C T - Both INDEL 0002.scaffold00003 598992 3 ... TCT scaffold1787 ReadM SNP 0002.scaffold00003 599200 1 C T - ReadM SNP 0002.scaffold00003 599206 1 G T - ReadM SNP 0002.scaffold00003 599254 1 C T - ReadM SNP 0002.scaffold00003 599601 1 C T - ReadM SNP 0002.scaffold00003 599611 1 G A - ReadM SNP 0002.scaffold00003 599680 1 G A - ReadM SNP 0002.scaffold00003 599808 1 T C - ReadM SNP 0002.scaffold00003 599834 1 T C - ReadM SNP 0002.scaffold00003 599849 1 A G - ReadM SNP 0002.scaffold00003 599896 1 T C - ReadM SNP 0002.scaffold00003 600010 1 A T - ReadM SNP 0002.scaffold00003 600083 1 T C - ReadM SNP 0002.scaffold00003 600215 1 G A - ReadM SNP 0002.scaffold00003 600233 1 A G - ReadM SNP 0002.scaffold00003 600309 1 A G - ReadM SNP 0002.scaffold00003 600380 1 A G - ReadM SNP 0002.scaffold00003 600414 1 C T - ReadM SNP 0002.scaffold00003 600435 1 A G - ReadM SNP 0002.scaffold00003 600510 1 T C - ReadM SNP 0002.scaffold00003 600546 1 A G - ReadM SNP 0002.scaffold00003 600657 1 C T - ReadM SNP 0002.scaffold00003 600684 1 A G - ReadM SNP 0002.scaffold00003 600938 1 G A - ReadM SNP 0002.scaffold00003 600959 1 G T - ReadM SNP 0002.scaffold00003 601086 1 T G - ReadM SNP 0002.scaffold00003 601097 1 A G - ReadM SNP 0002.scaffold00003 601173 1 G A - ReadM SNP 0002.scaffold00003 601245 1 C T - ReadM SNP 0002.scaffold00003 601326 1 T G - ReadM SNP 0002.scaffold00003 601657 1 T C - ReadM SNP 0002.scaffold00003 601682 1 C T - ReadM INDEL 0002.scaffold00003 601685 1 . A - ReadM SNP 0002.scaffold00003 601707 2 GC TT - ReadM SNP 0002.scaffold00003 601758 1 T C - ReadM SNP 0002.scaffold00003 601806 1 G A - ReadM SNP 0002.scaffold00003 601852 1 T G - ReadM SNP 0002.scaffold00003 601860 1 T A - ReadM SNP 0002.scaffold00003 601938 1 C A - ReadM SNP 0002.scaffold00003 602089 1 G A - ReadM SNP 0002.scaffold00003 602218 1 A T - ReadM SNP 0002.scaffold00003 602275 1 A G - ReadM SNP 0002.scaffold00003 602287 1 G A - ReadM SNP 0002.scaffold00003 602434 1 C G - ReadM SNP 0002.scaffold00003 602485 1 G A - ReadM SNP 0002.scaffold00003 602571 1 T C - ReadM SNP 0002.scaffold00003 602585 1 T C - ReadM SNP 0002.scaffold00003 602964 1 C T - ReadM SNP 0002.scaffold00003 602972 1 A C - Both SNP 0002.scaffold00003 603072 1 T C scaffold1787 ReadM INDEL 0002.scaffold00003 603313 1 . C - ReadM SNP 0002.scaffold00003 603328 1 G T - ReadM SNP 0002.scaffold00003 603342 1 A G - ReadM SNP 0002.scaffold00003 603494 1 C T - ReadM SNP 0002.scaffold00003 603538 1 T C - ReadM SNP 0002.scaffold00003 603591 1 A G - ReadM SNP 0002.scaffold00003 603600 1 T C - ReadM SNP 0002.scaffold00003 603823 1 G C - ReadM SNP 0002.scaffold00003 603922 1 A G - ReadM SNP 0002.scaffold00003 603934 1 A C - ReadM SNP 0002.scaffold00003 603948 1 C T - ReadM SNP 0002.scaffold00003 604095 1 G A - ReadM SNP 0002.scaffold00003 604098 1 A G - ReadM SNP 0002.scaffold00003 604204 1 A G - ReadM SNP 0002.scaffold00003 604369 1 A C - ReadM SNP 0002.scaffold00003 604424 1 A G - ReadM SNP 0002.scaffold00003 604444 1 A G - ReadM SNP 0002.scaffold00003 604544 1 G A - ReadM SNP 0002.scaffold00003 604610 1 T G - ReadM SNP 0002.scaffold00003 604732 1 C A - ReadM SNP 0002.scaffold00003 604861 1 G A - ReadM SNP 0002.scaffold00003 604927 1 A T - ReadM SNP 0002.scaffold00003 604960 1 A G - ReadM SNP 0002.scaffold00003 605041 1 C T - ReadM SNP 0002.scaffold00003 605097 1 G T - ReadM SNP 0002.scaffold00003 605132 1 T G - ReadM SNP 0002.scaffold00003 605313 1 C G - ReadM SNP 0002.scaffold00003 605352 1 G A - ReadM SNP 0002.scaffold00003 605354 1 C T - ReadM SNP 0002.scaffold00003 605526 1 T C - ReadM SNP 0002.scaffold00003 605535 1 C T - ReadM SNP 0002.scaffold00003 605576 1 T C - ReadM SNP 0002.scaffold00003 605586 1 T C - ReadM INDEL 0002.scaffold00003 605632 1 . G - ReadM SNP 0002.scaffold00003 605645 1 G A - ReadM SNP 0002.scaffold00003 605703 1 G C - ReadM SNP 0002.scaffold00003 605709 1 G A - ReadM SNP 0002.scaffold00003 605751 1 A C - ReadM SNP 0002.scaffold00003 605812 1 C T - ReadM SNP 0002.scaffold00003 605836 1 G C - ReadM SNP 0002.scaffold00003 605917 1 T A - ReadM SNP 0002.scaffold00003 605925 1 T A - ReadM SNP 0002.scaffold00003 606041 1 C A - ReadM SNP 0002.scaffold00003 606143 1 G T - ReadM INDEL 0002.scaffold00003 606277 1 . G - ReadM SNP 0002.scaffold00003 606301 1 C T - ReadM SNP 0002.scaffold00003 606379 1 G A - ReadM SNP 0002.scaffold00003 606452 1 C T - ReadM SNP 0002.scaffold00003 606515 1 C T - Both SNP 0002.scaffold00003 606724 1 G A scaffold1787 Both INDEL 0002.scaffold00003 606779 1 A . scaffold1787 Both SNP 0002.scaffold00003 606811 1 T A scaffold1787 Both SNP 0002.scaffold00003 606835 1 C A scaffold1787 Both SNP 0002.scaffold00003 606954 1 A T scaffold1787 ScafM SNP 0002.scaffold00003 607061 1 C A scaffold1787 ScafM INDEL 0002.scaffold00003 607100 12 TAATCCTCAGAT ............ scaffold1787 ScafM INDEL 0002.scaffold00003 607113 3 AAA ... scaffold1787 ScafM INDEL 0002.scaffold00003 607122 3 ACA ... scaffold1787 ScafM SNP 0002.scaffold00003 607127 1 A G scaffold1787 Both SNP 0002.scaffold00003 607185 1 G T scaffold1787 ScafM INDEL 0002.scaffold00003 607325 25 ......................... CCGTCGAATGGTCGCCCACAGCCTG scaffold1787 Both SNP 0002.scaffold00003 607380 1 G A scaffold1787 ReadM SNP 0002.scaffold00003 607508 1 G A - ReadM SNP 0002.scaffold00003 607538 1 T C - ReadM SNP 0002.scaffold00003 607895 1 C T - ScafM SNP 0002.scaffold00003 608009 1 C A scaffold1787 Both SNP 0002.scaffold00003 608166 1 A T scaffold1787 Both SNP 0002.scaffold00003 608209 1 T C scaffold1787 ReadM SNP 0002.scaffold00003 608282 1 A G - ReadM SNP 0002.scaffold00003 608284 1 A G - ReadM SNP 0002.scaffold00003 608446 1 T G - ReadM SNP 0002.scaffold00003 608478 1 C T - ReadM SNP 0002.scaffold00003 608553 1 A C - ReadM SNP 0002.scaffold00003 608641 1 T C - ReadM SNP 0002.scaffold00003 608728 1 T C - ReadM SNP 0002.scaffold00003 608737 1 C T - ReadM SNP 0002.scaffold00003 608880 1 C T - ReadM SNP 0002.scaffold00003 608953 1 G A - ReadM SNP 0002.scaffold00003 609035 1 A G - ReadM SNP 0002.scaffold00003 609045 1 G T - ReadM SNP 0002.scaffold00003 609134 1 G A - ReadM SNP 0002.scaffold00003 609144 1 G A - ReadM SNP 0002.scaffold00003 609270 1 C T - ReadM SNP 0002.scaffold00003 609341 1 G A - ReadM SNP 0002.scaffold00003 609531 2 CG TA - ReadM SNP 0002.scaffold00003 609626 1 T C - ReadM SNP 0002.scaffold00003 609629 1 A G - ReadM SNP 0002.scaffold00003 609901 1 C G - ReadM SNP 0002.scaffold00003 609989 1 C A - ReadM SNP 0002.scaffold00003 610034 1 G A - ReadM SNP 0002.scaffold00003 610145 1 T A - ReadM SNP 0002.scaffold00003 610151 1 T C - ReadM SNP 0002.scaffold00003 610194 1 G A - ReadM SNP 0002.scaffold00003 610264 1 A T - ReadM SNP 0002.scaffold00003 610303 1 T C - ReadM SNP 0002.scaffold00003 610400 1 C T - ReadM SNP 0002.scaffold00003 610566 1 A G - ReadM SNP 0002.scaffold00003 610669 1 A G - ReadM SNP 0002.scaffold00003 610679 1 T G - ReadM SNP 0002.scaffold00003 610755 1 C T - ReadM SNP 0002.scaffold00003 610789 1 T G - ReadM SNP 0002.scaffold00003 610877 1 G A - ReadM SNP 0002.scaffold00003 610903 1 G A - ReadM SNP 0002.scaffold00003 610911 1 G A - ReadM SNP 0002.scaffold00003 610965 1 G A - ReadM SNP 0002.scaffold00003 610986 1 A G - ReadM SNP 0002.scaffold00003 611021 1 T G - ReadM SNP 0002.scaffold00003 611137 1 A G - ReadM SNP 0002.scaffold00003 611378 1 T C - ReadM SNP 0002.scaffold00003 611398 1 T G - ReadM SNP 0002.scaffold00003 611482 1 C A - ReadM SNP 0002.scaffold00003 611511 1 G A - ReadM SNP 0002.scaffold00003 611953 1 G T - ReadM INDEL 0002.scaffold00003 611970 1 A . - ReadM SNP 0002.scaffold00003 611982 1 A G - ReadM SNP 0002.scaffold00003 612182 1 T C - ReadM SNP 0002.scaffold00003 612295 1 A T - ReadM SNP 0002.scaffold00003 612375 1 C T - ReadM SNP 0002.scaffold00003 612453 1 C T - ReadM SNP 0002.scaffold00003 612518 1 G A - ReadM SNP 0002.scaffold00003 612521 1 C T - ReadM SNP 0002.scaffold00003 612601 1 G T - ReadM SNP 0002.scaffold00003 613030 1 A G - ReadM SNP 0002.scaffold00003 613103 1 C A - ReadM SNP 0002.scaffold00003 613115 1 G T - Both SNP 0002.scaffold00003 613282 1 A G scaffold1787 ReadM SNP 0002.scaffold00003 613557 1 G C - ReadM SNP 0002.scaffold00003 613632 1 A G - ReadM SNP 0002.scaffold00003 613769 1 T C - ReadM SNP 0002.scaffold00003 613885 1 T G - ReadM SNP 0002.scaffold00003 613906 1 A G - ReadM SNP 0002.scaffold00003 614027 1 A G - ReadM SNP 0002.scaffold00003 614068 1 T G - ReadM SNP 0002.scaffold00003 614123 1 G A - Both SNP 0002.scaffold00003 614265 1 A T scaffold1787 Both SNP 0002.scaffold00003 614281 1 T C scaffold1787 ScafM SNP 0002.scaffold00003 614327 1 T A scaffold1787 Both SNP 0002.scaffold00003 614337 1 G A scaffold1787 Both SNP 0002.scaffold00003 614453 1 T G scaffold1787 ScafM SNP 0002.scaffold00003 614482 1 C T scaffold1787 Both SNP 0002.scaffold00003 614540 1 G A scaffold1787 Both SNP 0002.scaffold00003 614569 1 G C scaffold1787 ScafM INDEL 0002.scaffold00003 614603 3 CAA ... scaffold1787 ReadM SNP 0002.scaffold00003 614625 1 G A - ReadM SNP 0002.scaffold00003 614863 1 A G - ReadM SNP 0002.scaffold00003 614921 1 C G - ReadM SNP 0002.scaffold00003 618315 1 A G - ReadM SNP 0002.scaffold00003 618393 1 T A - ReadM SNP 0002.scaffold00003 618430 1 T C - ReadM SNP 0002.scaffold00003 618549 1 T G - ReadM SNP 0002.scaffold00003 618691 1 G A - ReadM SNP 0002.scaffold00003 618831 1 C T - ReadM SNP 0002.scaffold00003 618968 1 G A - ReadM SNP 0002.scaffold00003 618988 1 A G - ReadM SNP 0002.scaffold00003 620751 1 A C - ReadM SNP 0002.scaffold00003 621067 1 A G - ReadM SNP 0002.scaffold00003 621127 1 A T - ReadM SNP 0002.scaffold00003 621187 1 G A - ScafM SNP 0002.scaffold00003 621200 2 AC TT scaffold2450 ScafM SNP 0002.scaffold00003 621205 1 A C scaffold2450 ScafM SNP 0002.scaffold00003 621308 1 A G scaffold2450 ScafM SNP 0002.scaffold00003 621320 1 G A scaffold2450 ScafM SNP 0002.scaffold00003 621352 1 A G scaffold2450 ScafM SNP 0002.scaffold00003 621363 1 G T scaffold2450 ScafM SNP 0002.scaffold00003 621372 1 T A scaffold2450 ScafM SNP 0002.scaffold00003 621379 1 A G scaffold2450 ScafM SNP 0002.scaffold00003 621402 1 T G scaffold2450 ScafM INDEL 0002.scaffold00003 621423 1 A . scaffold2450 ScafM SNP 0002.scaffold00003 621428 1 G T scaffold2450 ScafM SNP 0002.scaffold00003 621438 1 C A scaffold2450 ScafM SNP 0002.scaffold00003 621440 1 C T scaffold2450 ScafM SNP 0002.scaffold00003 621442 1 G C scaffold2450 ScafM SNP 0002.scaffold00003 621459 1 A T scaffold2450 ScafM SNP 0002.scaffold00003 621461 1 A G scaffold2450 ScafM SNP 0002.scaffold00003 621501 1 A T scaffold2450 ScafM INDEL 0002.scaffold00003 621514 12 ............ TAATAATTCCAC scaffold2450 ScafM SNP 0002.scaffold00003 621523 1 G T scaffold2450 ScafM SNP 0002.scaffold00003 621535 1 A T scaffold2450 ScafM INDEL 0002.scaffold00003 624730 1 T . scaffold2720 ScafM INDEL 0002.scaffold00003 625026 2 .. AA scaffold2720 ScafM SNP 0002.scaffold00003 625028 1 T A scaffold2720 ScafM SNP 0002.scaffold00003 625031 1 A G scaffold2720 Both INDEL 0002.scaffold00003 625079 1 A . scaffold2720 Both SNP 0002.scaffold00003 625115 1 A G scaffold2720 Both SNP 0002.scaffold00003 625252 1 T C scaffold2720 Both SNP 0002.scaffold00003 625279 1 T A scaffold2720 Both SNP 0002.scaffold00003 625342 1 G A scaffold2720 ScafM SNP 0002.scaffold00003 625536 1 A T scaffold2720 ScafM SNP 0002.scaffold00003 625547 1 C T scaffold2720 Both INDEL 0002.scaffold00003 625688 1 . T scaffold2720 Both SNP 0002.scaffold00003 625734 1 T G scaffold2720 ScafM INDEL 0002.scaffold00003 626039 3 ... TTT scaffold2720 ScafM SNP 0002.scaffold00003 626051 1 A G scaffold2720 ScafM SNP 0002.scaffold00003 626079 1 A G scaffold2720 ScafM SNP 0002.scaffold00003 626085 1 T G scaffold2720 ScafM SNP 0002.scaffold00003 626204 1 G T scaffold2720 Both INDEL 0002.scaffold00003 626263 1 . A scaffold2720 ReadM SNP 0002.scaffold00003 626329 1 A G - ReadM SNP 0002.scaffold00003 626548 1 G A - ScafM INDEL 0002.scaffold00003 627083 1 A . scaffold34491 ScafM SNP 0002.scaffold00003 627086 1 T A scaffold34491 ScafM SNP 0002.scaffold00003 627142 1 G T scaffold34491 ScafM SNP 0002.scaffold00003 627145 1 C T scaffold34491 ScafM INDEL 0002.scaffold00003 627146 1 . G scaffold34491 ScafM SNP 0002.scaffold00003 627152 1 T C scaffold34491 ScafM SNP 0002.scaffold00003 627168 1 C A scaffold34491 ScafM SNP 0002.scaffold00003 627207 1 T A scaffold34491 ScafM INDEL 0002.scaffold00003 627258 1 . A scaffold34491 ReadM SNP 0002.scaffold00003 627426 1 A G - ReadM SNP 0002.scaffold00003 627527 1 C T - ReadM SNP 0002.scaffold00003 627683 1 G T - ReadM INDEL 0002.scaffold00003 627741 1 A . - ReadM SNP 0002.scaffold00003 628083 1 A G - ReadM SNP 0002.scaffold00003 628225 1 A G - ReadM SNP 0002.scaffold00003 628322 1 A T - ReadM SNP 0002.scaffold00003 628534 1 T C - ReadM SNP 0002.scaffold00003 628775 1 T C - ReadM SNP 0002.scaffold00003 628882 1 A C - ReadM SNP 0002.scaffold00003 628956 1 A C - ReadM SNP 0002.scaffold00003 629181 1 C T - ReadM SNP 0002.scaffold00003 629372 1 G A - ReadM SNP 0002.scaffold00003 629586 1 A C - ReadM SNP 0002.scaffold00003 629683 1 C T - ReadM SNP 0002.scaffold00003 629701 1 C G - ReadM INDEL 0002.scaffold00003 629829 1 A . - ReadM SNP 0002.scaffold00003 630015 1 A G - ReadM SNP 0002.scaffold00003 630074 1 T A - ScafM SNP 0002.scaffold00003 633096 1 C A scaffold22595 ScafM INDEL 0002.scaffold00003 633122 1 A . scaffold22595 ScafM INDEL 0002.scaffold00003 633157 2 .. AG scaffold22595 ScafM INDEL 0002.scaffold00003 633173 1 . A scaffold22595 ScafM SNP 0002.scaffold00003 633214 1 G T scaffold22595 ScafM SNP 0002.scaffold00003 633233 1 C T scaffold22595 ScafM SNP 0002.scaffold00003 633270 1 T C scaffold22595 ScafM SNP 0002.scaffold00003 633282 1 T C scaffold22595 ScafM SNP 0002.scaffold00003 633348 1 G A scaffold22595 ScafM SNP 0002.scaffold00003 633368 1 A G scaffold22595 ScafM SNP 0002.scaffold00003 633387 1 C G scaffold22595 ScafM SNP 0002.scaffold00003 633424 1 G A scaffold22595 ScafM SNP 0002.scaffold00003 633441 1 T C scaffold22595 ScafM INDEL 0002.scaffold00003 633443 4 ..TC AAGA scaffold22595 ScafM SNP 0002.scaffold00003 633514 1 T G scaffold22595 ScafM SNP 0002.scaffold00003 633532 1 A G scaffold22595 ScafM INDEL 0002.scaffold00003 633536 5 GCAAC ..... scaffold22595 ScafM SNP 0002.scaffold00003 633548 1 G T scaffold22595 ScafM SNP 0002.scaffold00003 633551 1 C A scaffold22595 ScafM SNP 0002.scaffold00003 633667 1 A C scaffold22595 ScafM SNP 0002.scaffold00003 633687 1 C G scaffold22595 ScafM SNP 0002.scaffold00003 633714 1 G A scaffold22595 ScafM SNP 0002.scaffold00003 633721 1 T C scaffold22595 ScafM SNP 0002.scaffold00003 633732 1 A C scaffold22595 ScafM SNP 0002.scaffold00003 633736 1 T A scaffold22595 ScafM SNP 0002.scaffold00003 633739 1 G A scaffold22595 ScafM SNP 0002.scaffold00003 633760 1 G T scaffold22595 ScafM SNP 0002.scaffold00003 633765 1 G A scaffold22595 ScafM SNP 0002.scaffold00003 633785 1 T A scaffold22595 ScafM INDEL 0002.scaffold00003 633801 3 AAC ... scaffold22595 ScafM INDEL 0002.scaffold00003 633834 2 .. TA scaffold22595 ScafM SNP 0002.scaffold00003 633847 1 C T scaffold22595 ScafM SNP 0002.scaffold00003 633863 1 G T scaffold22595 ReadM SNP 0002.scaffold00003 690999 1 C T - ReadM SNP 0002.scaffold00003 691114 1 G T - ReadM SNP 0002.scaffold00003 691308 1 T C - Both SNP 0002.scaffold00003 694784 1 A C scaffold17306 ScafM INDEL 0002.scaffold00003 695016 2 .. TT scaffold17306 Both SNP 0002.scaffold00003 695058 1 G T scaffold17306 Both SNP 0002.scaffold00003 695082 1 A G scaffold17306 Both SNP 0002.scaffold00003 695094 1 T A scaffold17306 Both SNP 0002.scaffold00003 695141 1 G T scaffold17306 Both SNP 0002.scaffold00003 695149 1 T G scaffold17306 Both SNP 0002.scaffold00003 695371 1 A T scaffold17306 ReadM INDEL 0002.scaffold00003 695684 1 . T - ReadM SNP 0002.scaffold00003 695688 1 G A - Both SNP 0002.scaffold00003 695812 1 G T scaffold17306 Both SNP 0002.scaffold00003 695825 1 C G scaffold17306 Both SNP 0002.scaffold00003 695924 1 C T scaffold17306 Both SNP 0002.scaffold00003 695949 1 G A scaffold17306 Both SNP 0002.scaffold00003 696143 1 A T scaffold17306 Both SNP 0002.scaffold00003 696160 1 T A scaffold17306 Both SNP 0002.scaffold00003 696636 1 T C scaffold17306 Both SNP 0002.scaffold00003 696671 1 A T scaffold17306 Both SNP 0002.scaffold00003 696862 1 T A scaffold17306 Both SNP 0002.scaffold00003 696956 1 T A scaffold17306 Both SNP 0002.scaffold00003 697364 1 G T scaffold17306 Both SNP 0002.scaffold00003 697529 1 T G scaffold17306 Both SNP 0002.scaffold00003 697928 1 A G scaffold17306 ScafM INDEL 0002.scaffold00003 698167 1 T . scaffold17306 ScafM INDEL 0002.scaffold00003 698387 1 . T scaffold17306 ScafM SNP 0002.scaffold00003 698392 1 G T scaffold17306 Both SNP 0002.scaffold00003 698412 1 C T scaffold17306 Both SNP 0002.scaffold00003 698469 1 G A scaffold17306 Both SNP 0002.scaffold00003 698591 1 G A scaffold17306 ScafM INDEL 0002.scaffold00003 698594 1 . T scaffold17306 ScafM SNP 0002.scaffold00003 698604 1 C T scaffold17306 Both INDEL 0002.scaffold00003 698790 1 . C scaffold17306 Both SNP 0002.scaffold00003 698835 1 A G scaffold17306 Both SNP 0002.scaffold00003 698853 1 C A scaffold17306 Both SNP 0002.scaffold00003 699074 1 G A scaffold17306 Both SNP 0002.scaffold00003 699095 1 T C scaffold17306 Both SNP 0002.scaffold00003 699175 1 G A scaffold17306 Both SNP 0002.scaffold00003 699182 1 A G scaffold17306 Both SNP 0002.scaffold00003 699401 1 C T scaffold17306 Both SNP 0002.scaffold00003 699503 1 T C scaffold17306 Both SNP 0002.scaffold00003 699632 1 G A scaffold17306 Both SNP 0002.scaffold00003 699826 1 T C scaffold17306 Both SNP 0002.scaffold00003 699951 1 A T scaffold17306 Both SNP 0002.scaffold00003 699978 1 G C scaffold17306 Both SNP 0002.scaffold00003 700013 1 G A scaffold17306 Both SNP 0002.scaffold00003 700024 1 G A scaffold17306 Both SNP 0002.scaffold00003 700275 1 C A scaffold17306 ScafM SNP 0002.scaffold00003 700303 2 TG CT scaffold17306 ScafM SNP 0002.scaffold00003 700331 1 A G scaffold17306 Both SNP 0002.scaffold00003 700368 1 C A scaffold17306 Both SNP 0002.scaffold00003 700594 1 G A scaffold17306 Both INDEL 0002.scaffold00003 700997 1 T . scaffold17306 ScafM INDEL 0002.scaffold00003 701088 6 TGGGGA ...... scaffold17306 Both SNP 0002.scaffold00003 701397 1 T C scaffold17306 Both SNP 0002.scaffold00003 701544 1 A G scaffold17306 Both SNP 0002.scaffold00003 701607 1 C T scaffold17306 Both SNP 0002.scaffold00003 701621 1 G A scaffold17306 Both SNP 0002.scaffold00003 703280 1 G A scaffold17306 Both SNP 0002.scaffold00003 703362 1 C T scaffold17306 Both INDEL 0002.scaffold00003 703385 1 . C scaffold17306 ReadM SNP 0002.scaffold00003 703442 1 C T - ScafM SNP 0002.scaffold00003 703549 1 G T scaffold17306 ScafM SNP 0002.scaffold00003 703577 1 T A scaffold17306 ScafM SNP 0002.scaffold00003 703592 2 TA GG scaffold17306 ScafM SNP 0002.scaffold00003 703675 1 A G scaffold17306 ScafM INDEL 0002.scaffold00003 703686 2 TT .. scaffold17306 Both SNP 0002.scaffold00003 703700 1 G A scaffold17306 Both SNP 0002.scaffold00003 703786 1 T C scaffold17306 ReadM SNP 0002.scaffold00003 703829 1 T C - ReadM SNP 0002.scaffold00003 703906 1 C T - ReadM SNP 0002.scaffold00003 703967 1 T A - ReadM SNP 0002.scaffold00003 704069 1 T G - ReadM SNP 0002.scaffold00003 704105 1 A G - ReadM SNP 0002.scaffold00003 704177 1 T C - ReadM SNP 0002.scaffold00003 704217 1 A G - ReadM SNP 0002.scaffold00003 704310 1 C T - ReadM SNP 0002.scaffold00003 704316 1 T C - ReadM SNP 0002.scaffold00003 704326 1 T C - ReadM SNP 0002.scaffold00003 704417 1 C T - ReadM SNP 0002.scaffold00003 704423 1 T C - ReadM SNP 0002.scaffold00003 704441 1 A G - ReadM SNP 0002.scaffold00003 704476 1 C A - ReadM SNP 0002.scaffold00003 704511 1 T A - ReadM SNP 0002.scaffold00003 704665 1 A G - ReadM SNP 0002.scaffold00003 704686 1 A C - ReadM SNP 0002.scaffold00003 704689 1 C A - ReadM INDEL 0002.scaffold00003 704789 1 . A - ReadM SNP 0002.scaffold00003 704796 1 G T - ReadM SNP 0002.scaffold00003 704800 1 T A - ReadM SNP 0002.scaffold00003 704834 1 T C - ReadM SNP 0002.scaffold00003 704942 1 C A - ReadM SNP 0002.scaffold00003 705150 1 C G - ScafM SNP 0002.scaffold00003 705155 1 C G scaffold17306 ScafM SNP 0002.scaffold00003 705179 2 GT TA scaffold17306 ReadM SNP 0002.scaffold00003 705379 1 A T - ReadM SNP 0002.scaffold00003 705381 1 A G - ReadM SNP 0002.scaffold00003 705408 1 G A - ReadM SNP 0002.scaffold00003 705460 1 G A - ReadM SNP 0002.scaffold00003 705620 1 A T - ReadM SNP 0002.scaffold00003 705726 1 C T - ReadM SNP 0002.scaffold00003 705799 1 G T - ReadM SNP 0002.scaffold00003 705873 1 G A - ReadM SNP 0002.scaffold00003 705935 1 T A - ReadM SNP 0002.scaffold00003 706048 1 A G - ReadM SNP 0002.scaffold00003 706133 1 G A - ReadM SNP 0002.scaffold00003 706146 1 C T - ReadM SNP 0002.scaffold00003 706206 1 T C - ReadM SNP 0002.scaffold00003 706345 1 T A - ReadM SNP 0002.scaffold00003 706348 1 C T - Both SNP 0002.scaffold00003 706375 1 G A scaffold17306 Both INDEL 0002.scaffold00003 706394 1 T . scaffold17306 Both SNP 0002.scaffold00003 706456 1 G A scaffold17306 Both SNP 0002.scaffold00003 706473 1 A G scaffold17306 Both SNP 0002.scaffold00003 706534 1 C T scaffold17306 Both SNP 0002.scaffold00003 706611 1 A C scaffold17306 Both SNP 0002.scaffold00003 706626 1 A G scaffold17306 Both SNP 0002.scaffold00003 706654 1 T C scaffold17306 ScafM SNP 0002.scaffold00003 706680 1 C T scaffold17306 ScafM SNP 0002.scaffold00003 706776 1 T G scaffold17306 ScafM SNP 0002.scaffold00003 706787 1 A T scaffold17306 Both SNP 0002.scaffold00003 706847 1 T C scaffold17306 ScafM SNP 0002.scaffold00003 707058 1 A T scaffold17306 ScafM INDEL 0002.scaffold00003 714978 1 G . scaffold16715 ScafM SNP 0002.scaffold00003 715023 1 T A scaffold16715 ScafM SNP 0002.scaffold00003 715045 1 C A scaffold16715 ReadM SNP 0002.scaffold00003 720095 1 C T - ReadM SNP 0002.scaffold00003 720112 1 T G - ReadM SNP 0002.scaffold00003 720242 1 T C - ReadM INDEL 0002.scaffold00003 720251 1 G . - ReadM INDEL 0002.scaffold00003 721647 1 . T - ReadM SNP 0002.scaffold00003 721810 1 T A - ReadM SNP 0002.scaffold00003 721817 1 G T - ReadM SNP 0002.scaffold00003 721851 1 T C - ReadM SNP 0002.scaffold00003 721914 1 A G - ReadM SNP 0002.scaffold00003 721969 1 G A - ReadM SNP 0002.scaffold00003 721977 1 A G - ReadM SNP 0002.scaffold00003 722079 1 G A - ReadM SNP 0002.scaffold00003 722300 1 A C - ReadM SNP 0002.scaffold00003 722375 1 G A - ReadM SNP 0002.scaffold00003 722436 1 G A - ReadM SNP 0002.scaffold00003 722558 1 T C - Both SNP 0002.scaffold00003 723363 1 T C scaffold17306 Both SNP 0002.scaffold00003 723382 1 T C scaffold17306 ScafM SNP 0002.scaffold00003 723491 1 C T scaffold17306 ReadM SNP 0002.scaffold00003 723563 1 G A - Both INDEL 0002.scaffold00003 723701 1 . A scaffold17306 Both SNP 0002.scaffold00003 723842 1 A G scaffold17306 Both SNP 0002.scaffold00003 724017 1 T G scaffold17306 Both SNP 0002.scaffold00003 724109 1 A T scaffold17306 ScafM SNP 0002.scaffold00003 724130 1 A C scaffold17306 ScafM SNP 0002.scaffold00003 724188 2 AT GC scaffold17306 ScafM SNP 0002.scaffold00003 724194 1 G A scaffold17306 ReadM SNP 0002.scaffold00003 724242 1 A G - ScafM SNP 0002.scaffold00003 724259 1 T C scaffold17306 ScafM SNP 0002.scaffold00003 724264 1 G T scaffold17306 ScafM SNP 0002.scaffold00003 724272 1 G A scaffold17306 ReadM SNP 0002.scaffold00003 724278 1 C T - Both SNP 0002.scaffold00003 724301 1 C T scaffold17306 ReadM SNP 0002.scaffold00003 724371 1 A G - ScafM SNP 0002.scaffold00003 730910 1 T C scaffold17306 ScafM SNP 0002.scaffold00003 730935 1 C T scaffold17306 Both SNP 0002.scaffold00003 731116 1 A T scaffold17306 ScafM INDEL 0002.scaffold00003 731192 10 TTCCACAAAA .......... scaffold17306 Both SNP 0002.scaffold00003 731253 1 G T scaffold17306 ScafM SNP 0002.scaffold00003 731309 1 C T scaffold17306 ScafM SNP 0002.scaffold00003 731323 1 A G scaffold17306 ScafM SNP 0002.scaffold00003 731338 1 A G scaffold17306 ScafM SNP 0002.scaffold00003 731352 1 A C scaffold17306 Both SNP 0002.scaffold00003 731399 1 A G scaffold17306 ReadM SNP 0002.scaffold00003 731440 1 C T - ReadM SNP 0002.scaffold00003 731521 1 A G - ReadM SNP 0002.scaffold00003 731547 1 A G - ReadM SNP 0002.scaffold00003 731648 1 A T - ReadM SNP 0002.scaffold00003 731816 1 T C - Both INDEL 0002.scaffold00003 731949 3 ... CTT scaffold17306 Both SNP 0002.scaffold00003 732209 1 A G scaffold17306 ReadM SNP 0002.scaffold00003 732519 1 G A - Both SNP 0002.scaffold00003 732686 1 A T scaffold17306 ScafM INDEL 0002.scaffold00003 732770 4 .... ACAC scaffold17306 ScafM INDEL 0002.scaffold00003 732772 1 . C scaffold17306 Both SNP 0002.scaffold00003 732986 1 C T scaffold17306 ScafM INDEL 0002.scaffold00003 733040 1 A . scaffold17306 ScafM SNP 0002.scaffold00003 733044 1 T A scaffold17306 Both SNP 0002.scaffold00003 733067 1 G T scaffold17306 Both SNP 0002.scaffold00003 733080 1 A G scaffold17306 Both SNP 0002.scaffold00003 733122 1 G A scaffold17306 Both SNP 0002.scaffold00003 733162 1 T C scaffold17306 Both INDEL 0002.scaffold00003 733276 1 T . scaffold17306 Both INDEL 0002.scaffold00003 733502 1 . A scaffold17306 Both SNP 0002.scaffold00003 733546 1 C T scaffold17306 Both SNP 0002.scaffold00003 733585 1 A G scaffold17306 ReadM INDEL 0002.scaffold00003 733589 1 . T - ScafM INDEL 0002.scaffold00003 733589 2 .C TA scaffold17306 Both SNP 0002.scaffold00003 733712 1 A C scaffold17306 Both SNP 0002.scaffold00003 733715 1 C T scaffold17306 Both SNP 0002.scaffold00003 733758 1 C T scaffold17306 ScafM SNP 0002.scaffold00003 733836 1 A C scaffold17306 Both SNP 0002.scaffold00003 734075 1 T C scaffold17306 Both SNP 0002.scaffold00003 734077 1 G A scaffold17306 Both SNP 0002.scaffold00003 734087 1 T C scaffold17306 Both INDEL 0002.scaffold00003 734120 1 . A scaffold17306 Both SNP 0002.scaffold00003 734524 1 C T scaffold17306 Both SNP 0002.scaffold00003 734576 1 C G scaffold17306 Both SNP 0002.scaffold00003 734590 1 C T scaffold17306 Both SNP 0002.scaffold00003 734630 1 G A scaffold17306 Both SNP 0002.scaffold00003 734695 1 T G scaffold17306 Both SNP 0002.scaffold00003 734743 1 A T scaffold17306 Both SNP 0002.scaffold00003 734746 1 G A scaffold17306 Both INDEL 0002.scaffold00003 734795 1 T . scaffold17306 ScafM INDEL 0002.scaffold00003 734834 1 . T scaffold17306 Both SNP 0002.scaffold00003 734941 1 T C scaffold17306 ReadM SNP 0002.scaffold00003 735124 1 A G - ReadM SNP 0002.scaffold00003 735201 1 T C - ReadM SNP 0002.scaffold00003 735308 1 G A - ReadM SNP 0002.scaffold00003 735358 1 T C - ReadM SNP 0002.scaffold00003 735468 1 A G - ReadM SNP 0002.scaffold00003 735499 1 C T - ReadM SNP 0002.scaffold00003 735552 1 T G - ReadM SNP 0002.scaffold00003 735646 1 T C - ReadM SNP 0002.scaffold00003 735652 1 A G - ScafM SNP 0002.scaffold00003 736005 1 C G scaffold4956 ScafM SNP 0002.scaffold00003 736041 1 G A scaffold4956 ScafM SNP 0002.scaffold00003 736054 1 A G scaffold4956 ScafM INDEL 0002.scaffold00003 736066 1 T . scaffold4956 ScafM SNP 0002.scaffold00003 736069 1 T C scaffold4956 ScafM SNP 0002.scaffold00003 736172 1 T C scaffold4956 ScafM SNP 0002.scaffold00003 736267 1 C T scaffold4956 ScafM INDEL 0002.scaffold00003 736304 1 . A scaffold4956 Both SNP 0002.scaffold00003 737802 1 C T scaffold4956 Both SNP 0002.scaffold00003 738048 1 T C scaffold4956 Both SNP 0002.scaffold00003 738251 1 G A scaffold4956 ScafM INDEL 0002.scaffold00003 738495 1 . A scaffold4956 Both INDEL 0002.scaffold00003 738776 2 .. TT scaffold4956 ScafM SNP 0002.scaffold00003 738782 1 A T scaffold4956 ScafM SNP 0002.scaffold00003 739313 1 G A scaffold4956 Both SNP 0002.scaffold00003 739760 1 C A scaffold4956 ScafM INDEL 0002.scaffold00003 740200 1 . A scaffold4956 ScafM SNP 0002.scaffold00003 740374 1 C T scaffold4956 ScafM INDEL 0002.scaffold00003 740384 1 A . scaffold4956 ScafM INDEL 0002.scaffold00003 740436 1 T . scaffold4956 ScafM SNP 0002.scaffold00003 740489 1 C T scaffold4956 ScafM SNP 0002.scaffold00003 740534 1 T C scaffold4956 ScafM SNP 0002.scaffold00003 740550 1 A T scaffold4956 ScafM SNP 0002.scaffold00003 740571 1 G A scaffold4956 ScafM INDEL 0002.scaffold00003 740844 2 AA .. scaffold4956 ScafM SNP 0002.scaffold00003 740943 1 G A scaffold4956 ScafM SNP 0002.scaffold00003 740976 1 T A scaffold4956 ScafM SNP 0002.scaffold00003 740992 1 C T scaffold4956 ScafM INDEL 0002.scaffold00003 741107 1 . A scaffold4956 ScafM SNP 0002.scaffold00003 741326 1 A T scaffold4956 ScafM INDEL 0002.scaffold00003 741891 2 .. GT scaffold4956 ScafM SNP 0002.scaffold00003 741902 1 A T scaffold4956 ScafM INDEL 0002.scaffold00003 742730 2 .. AT scaffold4956 ScafM SNP 0002.scaffold00003 742842 1 T C scaffold4956 ScafM SNP 0002.scaffold00003 743066 1 G A scaffold4956 ScafM SNP 0002.scaffold00003 743081 1 A T scaffold4956 ScafM SNP 0002.scaffold00003 743126 1 T A scaffold4956 ScafM SNP 0002.scaffold00003 743144 1 C A scaffold4956 ScafM SNP 0002.scaffold00003 743153 1 T G scaffold4956 ScafM SNP 0002.scaffold00003 743492 1 A G scaffold4956 ScafM SNP 0002.scaffold00003 743517 1 T C scaffold4956 ReadM SNP 0002.scaffold00003 743915 1 C T - Both SNP 0002.scaffold00003 744125 1 C T scaffold4956 Both SNP 0002.scaffold00003 744131 1 T G scaffold4956 ScafM INDEL 0002.scaffold00003 744259 3 ... TGA scaffold4956 ReadM SNP 0002.scaffold00003 744291 1 T G - Both SNP 0002.scaffold00003 744605 1 A T scaffold4956 Both SNP 0002.scaffold00003 744612 1 T C scaffold4956 Both SNP 0002.scaffold00003 744760 1 T G scaffold4956 Both SNP 0002.scaffold00003 744786 1 A G scaffold4956 Both SNP 0002.scaffold00003 744897 1 C A scaffold4956 ScafM INDEL 0002.scaffold00003 744996 3 ... TTT scaffold4956 ScafM SNP 0002.scaffold00003 744998 1 A T scaffold4956 Both SNP 0002.scaffold00003 745063 1 C T scaffold4956 ScafM SNP 0002.scaffold00003 745134 1 C T scaffold4956 ReadM SNP 0002.scaffold00003 745316 1 T C - ReadM SNP 0002.scaffold00003 745354 1 T C - Both SNP 0002.scaffold00003 745676 1 C A scaffold4956 Both SNP 0002.scaffold00003 745689 1 C T scaffold4956 Both SNP 0002.scaffold00003 745694 1 A G scaffold4956 ScafM SNP 0002.scaffold00003 745759 1 C T scaffold4956 Both SNP 0002.scaffold00003 745781 1 A G scaffold4956 Both SNP 0002.scaffold00003 745806 1 C T scaffold4956 Both SNP 0002.scaffold00003 745854 1 C T scaffold4956 Both SNP 0002.scaffold00003 745882 1 C A scaffold4956 ScafM SNP 0002.scaffold00003 745900 1 T C scaffold4956 ReadM SNP 0002.scaffold00003 746070 1 C A - ReadM SNP 0002.scaffold00003 746095 1 A G - ReadM SNP 0002.scaffold00003 746442 1 C T - ReadM SNP 0002.scaffold00003 746477 1 A C - ReadM SNP 0002.scaffold00003 746593 1 T C - ReadM SNP 0002.scaffold00003 746626 1 T G - ReadM SNP 0002.scaffold00003 748290 1 A T - ReadM SNP 0002.scaffold00003 748322 1 T C - ReadM SNP 0002.scaffold00003 748375 1 A C - ReadM SNP 0002.scaffold00003 748662 1 G A - ReadM SNP 0002.scaffold00003 748711 1 A G - ReadM SNP 0002.scaffold00003 748723 1 G A - ReadM SNP 0002.scaffold00003 748778 1 A G - ScafM INDEL 0002.scaffold00003 749594 6 ...... AGTAAT scaffold4956 Both SNP 0002.scaffold00003 749716 1 C A scaffold4956 Both SNP 0002.scaffold00003 749790 1 A G scaffold4956 Both SNP 0002.scaffold00003 749852 1 T G scaffold4956 Both SNP 0002.scaffold00003 749964 1 C A scaffold4956 ScafM SNP 0002.scaffold00003 750115 1 C A scaffold4956 ScafM SNP 0002.scaffold00003 750123 1 A G scaffold4956 ScafM SNP 0002.scaffold00003 750182 1 G A scaffold4956 ScafM SNP 0002.scaffold00003 750227 1 C T scaffold4956 ReadM SNP 0002.scaffold00003 752132 1 G A - ReadM SNP 0002.scaffold00003 752366 1 C T - ReadM SNP 0002.scaffold00003 752802 1 C T - ScafM SNP 0002.scaffold00003 753693 1 A G scaffold3353 ScafM SNP 0002.scaffold00003 753718 1 T C scaffold3353 ReadM SNP 0002.scaffold00003 754717 1 G A - ReadM SNP 0002.scaffold00003 756139 1 T C - ReadM SNP 0002.scaffold00003 756371 1 A G - ReadM SNP 0002.scaffold00003 756405 1 A G - ScafM SNP 0002.scaffold00003 758137 1 T C scaffold297 ScafM SNP 0002.scaffold00003 758610 1 A C scaffold297 ScafM SNP 0002.scaffold00003 758657 1 G A scaffold297 ScafM SNP 0002.scaffold00003 758670 1 C T scaffold297 ScafM INDEL 0002.scaffold00003 758693 1 . A scaffold297 ReadM SNP 0002.scaffold00003 758750 1 C T - ReadM INDEL 0002.scaffold00003 758769 1 . T - ScafM SNP 0002.scaffold00003 758873 1 G A scaffold297 ReadM SNP 0002.scaffold00003 758928 1 C T - ReadM SNP 0002.scaffold00003 758986 1 T C - ReadM SNP 0002.scaffold00003 759096 1 C T - ReadM SNP 0002.scaffold00003 759108 1 C A - ReadM SNP 0002.scaffold00003 759195 1 G A - ReadM SNP 0002.scaffold00003 759326 1 C A - ReadM SNP 0002.scaffold00003 759367 1 C T - ReadM SNP 0002.scaffold00003 759488 1 T C - ReadM SNP 0002.scaffold00003 759547 1 A G - ReadM SNP 0002.scaffold00003 759798 1 A G - ReadM SNP 0002.scaffold00003 760001 1 A G - ReadM SNP 0002.scaffold00003 760235 1 C T - ReadM SNP 0002.scaffold00003 760288 1 G A - ReadM SNP 0002.scaffold00003 760439 1 A G - ReadM SNP 0002.scaffold00003 760441 1 C T - ReadM SNP 0002.scaffold00003 760767 1 A G - ReadM SNP 0002.scaffold00003 760844 1 A G - ReadM SNP 0002.scaffold00003 760901 1 T C - ReadM SNP 0002.scaffold00003 760956 1 A G - ReadM SNP 0002.scaffold00003 760963 1 G T - ReadM SNP 0002.scaffold00003 761053 1 A G - ReadM SNP 0002.scaffold00003 761073 1 G A - ReadM SNP 0002.scaffold00003 762351 1 C T - ReadM SNP 0002.scaffold00003 762426 1 A T - ReadM SNP 0002.scaffold00003 762430 1 T C - ReadM SNP 0002.scaffold00003 762473 1 T C - ReadM SNP 0002.scaffold00003 762647 1 G A - ReadM SNP 0002.scaffold00003 762692 1 C T - ReadM SNP 0002.scaffold00003 762706 1 G A - ReadM SNP 0002.scaffold00003 762764 1 C A - ReadM SNP 0002.scaffold00003 762797 1 T C - ReadM SNP 0002.scaffold00003 762803 1 G A - ReadM SNP 0002.scaffold00003 762884 1 G A - ReadM SNP 0002.scaffold00003 762899 1 G A - ReadM SNP 0002.scaffold00003 762978 1 T C - ReadM SNP 0002.scaffold00003 762993 1 G T - ReadM SNP 0002.scaffold00003 763001 1 G C - ReadM SNP 0002.scaffold00003 763024 1 G A - ReadM SNP 0002.scaffold00003 763034 1 A G - ReadM SNP 0002.scaffold00003 763144 1 A C - ReadM SNP 0002.scaffold00003 763180 1 A G - ReadM SNP 0002.scaffold00003 763194 1 A G - ReadM SNP 0002.scaffold00003 763232 1 A G - ReadM SNP 0002.scaffold00003 763333 1 T C - ReadM SNP 0002.scaffold00003 763347 1 C T - ReadM INDEL 0002.scaffold00003 763394 1 A . - ReadM SNP 0002.scaffold00003 763425 1 G A - ReadM SNP 0002.scaffold00003 763632 1 A G - ReadM SNP 0002.scaffold00003 763655 1 C A - ReadM SNP 0002.scaffold00003 763661 1 A T - ReadM SNP 0002.scaffold00003 763960 1 C G - ReadM SNP 0002.scaffold00003 763995 1 G A - ReadM SNP 0002.scaffold00003 764031 1 G A - ReadM SNP 0002.scaffold00003 764086 1 A G - ReadM SNP 0002.scaffold00003 764172 1 T C - ReadM SNP 0002.scaffold00003 764313 1 G A - ReadM SNP 0002.scaffold00003 764367 1 C G - ReadM SNP 0002.scaffold00003 764391 1 G A - ReadM SNP 0002.scaffold00003 764404 1 T C - ReadM SNP 0002.scaffold00003 764469 1 C A - ReadM SNP 0002.scaffold00003 764622 1 C T - ReadM SNP 0002.scaffold00003 764637 1 A G - ReadM SNP 0002.scaffold00003 764714 1 A G - ReadM SNP 0002.scaffold00003 764919 1 G A - ReadM SNP 0002.scaffold00003 764950 1 A T - ReadM SNP 0002.scaffold00003 765041 1 T C - ReadM SNP 0002.scaffold00003 765044 1 G A - ReadM SNP 0002.scaffold00003 765275 1 G A - Both SNP 0002.scaffold00003 765494 1 T C scaffold297 ScafM SNP 0002.scaffold00003 765530 1 T C scaffold297 ReadM SNP 0002.scaffold00003 766066 1 A T - ReadM SNP 0002.scaffold00003 766088 1 G A - ScafM SNP 0002.scaffold00003 766365 1 T C scaffold297 ScafM SNP 0002.scaffold00003 766391 1 T A scaffold297 ReadM SNP 0002.scaffold00003 766460 1 C T - ReadM SNP 0002.scaffold00003 767013 1 G T - ReadM SNP 0002.scaffold00003 767031 1 C T - ReadM SNP 0002.scaffold00003 767125 1 A G - ReadM SNP 0002.scaffold00003 767380 1 C T - ReadM SNP 0002.scaffold00003 767439 1 G A - ReadM SNP 0002.scaffold00003 769019 1 T A - ReadM SNP 0002.scaffold00003 769055 1 A G - ReadM SNP 0002.scaffold00003 769059 1 G T - ReadM SNP 0002.scaffold00003 769322 1 C A - ReadM SNP 0002.scaffold00003 769366 1 G C - ReadM SNP 0002.scaffold00003 769465 1 C G - ReadM SNP 0002.scaffold00003 769493 1 A G - ScafM SNP 0002.scaffold00003 769847 1 A G scaffold297 ScafM SNP 0002.scaffold00003 769923 1 G C scaffold297 ReadM SNP 0002.scaffold00003 770094 1 T G - ReadM SNP 0002.scaffold00003 770126 1 T G - ReadM SNP 0002.scaffold00003 770189 1 C T - ReadM SNP 0002.scaffold00003 770205 1 G T - ReadM SNP 0002.scaffold00003 770308 1 G A - ReadM SNP 0002.scaffold00003 770335 1 T A - ReadM SNP 0002.scaffold00003 770360 1 A G - ReadM SNP 0002.scaffold00003 770384 1 G A - ReadM SNP 0002.scaffold00003 770542 1 C T - ReadM INDEL 0002.scaffold00003 770614 1 . G - ReadM SNP 0002.scaffold00003 770718 1 A G - ReadM SNP 0002.scaffold00003 770823 1 G A - ReadM SNP 0002.scaffold00003 770841 1 C T - ReadM SNP 0002.scaffold00003 770895 1 G A - ReadM SNP 0002.scaffold00003 770976 1 T G - ScafM INDEL 0002.scaffold00003 771039 1 . T scaffold297 Both SNP 0002.scaffold00003 771069 1 C T scaffold297 ScafM INDEL 0002.scaffold00003 771094 7 CTTTGTC ....... scaffold297 ReadM INDEL 0002.scaffold00003 771215 1 T . - ReadM SNP 0002.scaffold00003 774294 1 C T - ReadM SNP 0002.scaffold00003 776872 1 C G - ReadM SNP 0002.scaffold00003 776975 1 T G - ReadM SNP 0002.scaffold00003 776996 1 A G - ReadM SNP 0002.scaffold00003 777072 1 A C - ReadM SNP 0002.scaffold00003 777130 1 A T - Both SNP 0002.scaffold00003 778271 1 T G scaffold297 Both SNP 0002.scaffold00003 778291 1 C A scaffold297 ScafM SNP 0002.scaffold00003 778315 1 C T scaffold297 Both SNP 0002.scaffold00003 778375 1 T G scaffold297 Both SNP 0002.scaffold00003 778398 1 C T scaffold297 Both SNP 0002.scaffold00003 778426 1 T C scaffold297 ReadM SNP 0002.scaffold00003 778479 1 T G - ReadM SNP 0002.scaffold00003 778517 1 C T - ReadM INDEL 0002.scaffold00003 778539 1 . A - ReadM SNP 0002.scaffold00003 778637 1 G T - ReadM SNP 0002.scaffold00003 778804 1 T C - ReadM SNP 0002.scaffold00003 778869 1 G A - ReadM SNP 0002.scaffold00003 778905 1 G A - ReadM SNP 0002.scaffold00003 779029 1 A C - ReadM SNP 0002.scaffold00003 779128 1 T C - ReadM SNP 0002.scaffold00003 779151 1 T C - ReadM SNP 0002.scaffold00003 779287 1 T C - ReadM SNP 0002.scaffold00003 779299 1 A C - ReadM SNP 0002.scaffold00003 779502 1 C T - ReadM SNP 0002.scaffold00003 779708 1 T A - ReadM SNP 0002.scaffold00003 779751 1 C T - ReadM SNP 0002.scaffold00003 779804 1 T C - ReadM SNP 0002.scaffold00003 779826 1 T C - ReadM SNP 0002.scaffold00003 779848 1 A G - ReadM SNP 0002.scaffold00003 779875 1 A G - ReadM SNP 0002.scaffold00003 779885 1 C T - ReadM SNP 0002.scaffold00003 779942 1 C T - ReadM SNP 0002.scaffold00003 780277 1 A G - ReadM SNP 0002.scaffold00003 780285 1 G T - ReadM SNP 0002.scaffold00003 780308 1 T C - ReadM SNP 0002.scaffold00003 780398 1 T A - ReadM SNP 0002.scaffold00003 780439 1 G T - ReadM SNP 0002.scaffold00003 780469 1 G A - ReadM SNP 0002.scaffold00003 780652 1 C A - ReadM SNP 0002.scaffold00003 780660 1 A G - ReadM SNP 0002.scaffold00003 780739 1 A G - ReadM SNP 0002.scaffold00003 780756 1 G C - ReadM SNP 0002.scaffold00003 780768 1 T C - ReadM SNP 0002.scaffold00003 780869 1 G T - ReadM SNP 0002.scaffold00003 780901 1 T G - ReadM SNP 0002.scaffold00003 780967 1 C G - ReadM SNP 0002.scaffold00003 780993 1 G A - ReadM SNP 0002.scaffold00003 781031 1 G A - ReadM SNP 0002.scaffold00003 781088 1 C T - ReadM SNP 0002.scaffold00003 781155 1 T C - ReadM SNP 0002.scaffold00003 781179 1 T A - ReadM SNP 0002.scaffold00003 781184 1 T C - ReadM SNP 0002.scaffold00003 781259 1 C T - ReadM SNP 0002.scaffold00003 781397 1 C T - ReadM SNP 0002.scaffold00003 781510 1 A C - ReadM SNP 0002.scaffold00003 781562 1 C T - ReadM SNP 0002.scaffold00003 781583 1 C T - ReadM SNP 0002.scaffold00003 781674 1 C T - ReadM SNP 0002.scaffold00003 781679 1 T C - ReadM SNP 0002.scaffold00003 781755 1 A T - ReadM SNP 0002.scaffold00003 781786 1 C T - ReadM SNP 0002.scaffold00003 781841 1 C T - ReadM INDEL 0002.scaffold00003 782045 3 AAC ... - ReadM SNP 0002.scaffold00003 782124 1 A G - ReadM SNP 0002.scaffold00003 782137 1 A T - ReadM SNP 0002.scaffold00003 782226 1 A T - ReadM SNP 0002.scaffold00003 782252 1 A T - ReadM SNP 0002.scaffold00003 782300 1 T C - ReadM SNP 0002.scaffold00003 782372 1 G A - ReadM SNP 0002.scaffold00003 782394 1 C G - ReadM SNP 0002.scaffold00003 782520 1 G A - ReadM SNP 0002.scaffold00003 782572 1 C T - ReadM SNP 0002.scaffold00003 782584 1 T C - ReadM SNP 0002.scaffold00003 782752 1 C T - ReadM SNP 0002.scaffold00003 782779 1 T G - ReadM SNP 0002.scaffold00003 782789 1 G T - ReadM SNP 0002.scaffold00003 782846 1 A T - ReadM SNP 0002.scaffold00003 782859 1 C T - ReadM SNP 0002.scaffold00003 782879 1 C T - Both SNP 0002.scaffold00003 782922 1 A G scaffold297 ReadM SNP 0002.scaffold00003 782960 1 C T - ReadM SNP 0002.scaffold00003 782982 1 C T - ReadM SNP 0002.scaffold00003 783055 1 A G - ReadM SNP 0002.scaffold00003 783090 1 A G - ReadM SNP 0002.scaffold00003 783221 1 G A - ReadM SNP 0002.scaffold00003 783330 1 C T - ReadM SNP 0002.scaffold00003 783345 1 C T - ReadM SNP 0002.scaffold00003 783364 1 G T - ReadM SNP 0002.scaffold00003 783375 1 G A - Both INDEL 0002.scaffold00003 783407 1 . T scaffold297 Both INDEL 0002.scaffold00003 783530 3 TTA ... scaffold297 Both SNP 0002.scaffold00003 783752 1 A G scaffold297 ReadM SNP 0002.scaffold00003 783999 1 G A - ReadM SNP 0002.scaffold00003 784018 1 T C - ReadM SNP 0002.scaffold00003 784034 1 C T - ReadM SNP 0002.scaffold00003 784096 1 A T - ReadM SNP 0002.scaffold00003 784188 1 T A - ReadM SNP 0002.scaffold00003 784329 1 T C - ReadM SNP 0002.scaffold00003 784340 1 G A - ReadM SNP 0002.scaffold00003 784360 1 C T - ReadM SNP 0002.scaffold00003 784495 1 C T - ReadM SNP 0002.scaffold00003 784531 1 T C - ReadM SNP 0002.scaffold00003 784560 1 A G - ReadM SNP 0002.scaffold00003 784630 1 C T - ReadM SNP 0002.scaffold00003 784719 1 C A - ReadM SNP 0002.scaffold00003 784724 1 C T - ReadM SNP 0002.scaffold00003 784739 1 C T - ReadM SNP 0002.scaffold00003 784821 1 C T - Both SNP 0002.scaffold00003 784841 1 C A scaffold297 Both SNP 0002.scaffold00003 784878 1 G T scaffold297 ReadM SNP 0002.scaffold00003 784999 1 G A - ReadM SNP 0002.scaffold00003 785131 1 G C - ReadM SNP 0002.scaffold00003 785279 1 C A - ReadM INDEL 0002.scaffold00003 785318 1 C . - Both SNP 0002.scaffold00003 785542 1 C A scaffold297 ReadM SNP 0002.scaffold00003 785767 1 C T - ReadM INDEL 0002.scaffold00003 785776 1 G . - ReadM SNP 0002.scaffold00003 785811 1 G C - ReadM SNP 0002.scaffold00003 786132 1 T C - ReadM SNP 0002.scaffold00003 786164 1 T C - ReadM SNP 0002.scaffold00003 786205 1 G C - ReadM SNP 0002.scaffold00003 786325 1 C T - ReadM SNP 0002.scaffold00003 786408 1 G A - ReadM SNP 0002.scaffold00003 786424 1 T C - ReadM SNP 0002.scaffold00003 786442 1 A G - ReadM SNP 0002.scaffold00003 786567 1 T C - ScafM SNP 0002.scaffold00003 786738 1 C T scaffold297 ScafM INDEL 0002.scaffold00003 786747 1 A . scaffold297 ScafM SNP 0002.scaffold00003 786765 1 A G scaffold297 Both SNP 0002.scaffold00003 786816 1 G A scaffold297 ScafM INDEL 0002.scaffold00003 786912 3 ... TAT scaffold297 Both SNP 0002.scaffold00003 786939 1 G A scaffold297 Both SNP 0002.scaffold00003 786960 1 T C scaffold297 Both SNP 0002.scaffold00003 787010 1 C A scaffold297 ScafM SNP 0002.scaffold00003 787071 1 A G scaffold297 ScafM SNP 0002.scaffold00003 787128 1 T A scaffold297 ScafM SNP 0002.scaffold00003 787147 1 A G scaffold297 ScafM SNP 0002.scaffold00003 787235 1 T C scaffold297 ScafM SNP 0002.scaffold00003 787280 1 A T scaffold297 ScafM SNP 0002.scaffold00003 787288 1 G A scaffold297 ScafM INDEL 0002.scaffold00003 787300 1 . C scaffold297 ScafM SNP 0002.scaffold00003 787321 1 A G scaffold297 ReadM SNP 0002.scaffold00003 788023 1 T C - ReadM INDEL 0002.scaffold00003 788024 1 . G - Both SNP 0002.scaffold00003 788076 1 G A scaffold297 Both SNP 0002.scaffold00003 788113 1 A C scaffold297 ScafM SNP 0002.scaffold00003 788140 1 T C scaffold297 ScafM SNP 0002.scaffold00003 788173 1 A G scaffold297 ScafM SNP 0002.scaffold00003 788182 1 C T scaffold297 ScafM SNP 0002.scaffold00003 788251 1 A G scaffold297 ScafM SNP 0002.scaffold00003 788356 1 A G scaffold297 ReadM SNP 0002.scaffold00003 801854 1 C A - ReadM SNP 0002.scaffold00003 801883 1 C A - ReadM INDEL 0002.scaffold00003 801955 1 C . - ReadM SNP 0002.scaffold00003 802285 1 T C - ReadM SNP 0002.scaffold00003 802302 1 A T - ReadM SNP 0002.scaffold00003 802357 1 G T - Both SNP 0002.scaffold00003 812690 1 A G scaffold297 Both SNP 0002.scaffold00003 812721 1 A G scaffold297 ScafM SNP 0002.scaffold00003 812766 1 T A scaffold297 ScafM SNP 0002.scaffold00003 812772 1 G T scaffold297 ScafM INDEL 0002.scaffold00003 812825 2 .. CA scaffold297 ReadM SNP 0002.scaffold00003 813008 1 T G - ReadM SNP 0002.scaffold00003 813054 1 G A - ReadM SNP 0002.scaffold00003 813068 1 T C - ReadM SNP 0002.scaffold00003 813084 1 G C - ReadM SNP 0002.scaffold00003 813150 1 A G - ReadM SNP 0002.scaffold00003 813158 1 C A - ReadM SNP 0002.scaffold00003 813269 1 C A - ReadM SNP 0002.scaffold00003 813324 1 G A - ReadM SNP 0002.scaffold00003 813338 1 T C - ReadM SNP 0002.scaffold00003 813373 1 G A - ReadM SNP 0002.scaffold00003 813466 1 T G - ReadM SNP 0002.scaffold00003 813613 1 T G - ReadM SNP 0002.scaffold00003 813623 1 T C - ReadM SNP 0002.scaffold00003 813649 1 A G - ReadM SNP 0002.scaffold00003 813785 1 C T - ReadM SNP 0002.scaffold00003 813841 1 T C - ReadM SNP 0002.scaffold00003 813850 1 A G - ReadM SNP 0002.scaffold00003 813898 1 A G - ReadM SNP 0002.scaffold00003 813906 1 A G - ReadM SNP 0002.scaffold00003 813915 1 G A - ReadM SNP 0002.scaffold00003 813999 1 C A - ReadM SNP 0002.scaffold00003 814107 1 T A - ReadM SNP 0002.scaffold00003 814117 1 T C - ReadM SNP 0002.scaffold00003 814242 1 A G - ReadM SNP 0002.scaffold00003 814247 1 G A - ReadM SNP 0002.scaffold00003 814286 1 C T - ReadM SNP 0002.scaffold00003 814349 1 T C - ReadM SNP 0002.scaffold00003 814366 1 A G - ReadM SNP 0002.scaffold00003 814414 1 T C - ReadM SNP 0002.scaffold00003 814420 1 T C - ReadM SNP 0002.scaffold00003 814480 1 A G - ReadM SNP 0002.scaffold00003 814522 1 C T - ReadM SNP 0002.scaffold00003 814545 1 A T - ReadM SNP 0002.scaffold00003 814584 1 A G - ReadM SNP 0002.scaffold00003 814655 1 T G - ReadM SNP 0002.scaffold00003 814683 1 A G - ReadM SNP 0002.scaffold00003 814782 1 G A - ScafM SNP 0002.scaffold00003 814968 1 C T scaffold297 ScafM SNP 0002.scaffold00003 814976 1 G A scaffold297 ScafM INDEL 0002.scaffold00003 815006 1 . A scaffold297 ScafM SNP 0002.scaffold00003 815042 1 G A scaffold297 ScafM INDEL 0002.scaffold00003 815079 1 . C scaffold297 ScafM SNP 0002.scaffold00003 815098 1 G A scaffold297 ScafM SNP 0002.scaffold00003 815108 1 G A scaffold297 ScafM SNP 0002.scaffold00003 815132 1 A G scaffold297 ScafM INDEL 0002.scaffold00003 816800 1 A . scaffold297 ScafM SNP 0002.scaffold00003 816908 1 T A scaffold297 Both SNP 0002.scaffold00003 816922 1 A T scaffold297 ScafM SNP 0002.scaffold00003 816983 1 C T scaffold297 Both SNP 0002.scaffold00003 816996 1 G A scaffold297 ReadM SNP 0002.scaffold00003 817204 1 C T - ReadM SNP 0002.scaffold00003 817257 1 G A - ReadM SNP 0002.scaffold00003 817274 1 C A - ReadM SNP 0002.scaffold00003 817404 1 G A - ReadM SNP 0002.scaffold00003 817626 1 A G - ReadM SNP 0002.scaffold00003 817632 1 C T - ReadM SNP 0002.scaffold00003 817697 1 C T - ReadM SNP 0002.scaffold00003 817709 1 C A - ReadM SNP 0002.scaffold00003 817722 1 T C - ReadM SNP 0002.scaffold00003 817793 1 G A - ReadM SNP 0002.scaffold00003 817855 1 T G - ReadM SNP 0002.scaffold00003 817915 1 G A - ReadM SNP 0002.scaffold00003 817951 1 G T - ReadM SNP 0002.scaffold00003 818172 1 T A - ReadM SNP 0002.scaffold00003 818199 1 C T - ReadM SNP 0002.scaffold00003 818247 1 A G - Both SNP 0002.scaffold00003 818273 1 T C scaffold297 ReadM SNP 0002.scaffold00003 818439 1 A C - ReadM SNP 0002.scaffold00003 818511 1 T G - ReadM SNP 0002.scaffold00003 818606 1 G A - ReadM SNP 0002.scaffold00003 818618 1 C G - ReadM SNP 0002.scaffold00003 818720 1 G T - ReadM SNP 0002.scaffold00003 818754 1 T C - ReadM SNP 0002.scaffold00003 818953 1 A G - ReadM SNP 0002.scaffold00003 818957 1 A C - ReadM SNP 0002.scaffold00003 818968 1 A G - ReadM SNP 0002.scaffold00003 819014 1 G T - ReadM SNP 0002.scaffold00003 819037 1 T A - ReadM SNP 0002.scaffold00003 819175 1 T A - Both SNP 0002.scaffold00003 819290 1 G A scaffold297 Both SNP 0002.scaffold00003 819325 1 C T scaffold297 Both SNP 0002.scaffold00003 819348 1 A G scaffold297 ScafM SNP 0002.scaffold00003 819362 1 C T scaffold297 ScafM SNP 0002.scaffold00003 819391 1 A G scaffold297 ScafM SNP 0002.scaffold00003 819408 1 T C scaffold297 ScafM SNP 0002.scaffold00003 819429 1 T C scaffold297 ScafM SNP 0002.scaffold00003 819454 1 A G scaffold297 ScafM SNP 0002.scaffold00003 819456 1 C T scaffold297 ScafM SNP 0002.scaffold00003 819507 1 C G scaffold297 ScafM SNP 0002.scaffold00003 819514 1 T C scaffold297 Both INDEL 0002.scaffold00003 819533 1 . T scaffold297 Both SNP 0002.scaffold00003 819561 1 G A scaffold297 Both SNP 0002.scaffold00003 819594 1 A G scaffold297 Both SNP 0002.scaffold00003 819665 1 G A scaffold297 Both SNP 0002.scaffold00003 819768 1 T C scaffold297 Both SNP 0002.scaffold00003 819774 1 C T scaffold297 Both SNP 0002.scaffold00003 819794 1 A G scaffold297 Both SNP 0002.scaffold00003 819910 1 C T scaffold297 Both SNP 0002.scaffold00003 819927 1 G A scaffold297 Both SNP 0002.scaffold00003 819977 1 A C scaffold297 Both SNP 0002.scaffold00003 819980 1 G T scaffold297 Both SNP 0002.scaffold00003 820073 1 C T scaffold297 Both SNP 0002.scaffold00003 820196 1 G A scaffold297 Both SNP 0002.scaffold00003 820204 1 G A scaffold297 ScafM SNP 0002.scaffold00003 820480 1 G A scaffold297 Both SNP 0002.scaffold00003 820506 1 C T scaffold297 Both SNP 0002.scaffold00003 820564 1 C T scaffold297 ReadM SNP 0002.scaffold00003 820678 1 T C - ReadM SNP 0002.scaffold00003 820707 1 C T - ReadM SNP 0002.scaffold00003 820933 1 G A - ReadM SNP 0002.scaffold00003 820938 1 T A - ReadM SNP 0002.scaffold00003 820962 1 C T - Both SNP 0002.scaffold00003 821055 1 G A scaffold297 Both SNP 0002.scaffold00003 821080 1 A G scaffold297 Both SNP 0002.scaffold00003 821258 1 T C scaffold297 ScafM SNP 0002.scaffold00003 821276 1 A C scaffold297 ScafM SNP 0002.scaffold00003 821278 1 G A scaffold297 Both SNP 0002.scaffold00003 821389 1 A G scaffold297 ScafM SNP 0002.scaffold00003 821472 2 TC CT scaffold297 Both SNP 0002.scaffold00003 821485 1 G T scaffold297 Both SNP 0002.scaffold00003 821509 1 G T scaffold297 Both SNP 0002.scaffold00003 821520 1 G C scaffold297 Both SNP 0002.scaffold00003 821647 1 A T scaffold297 Both SNP 0002.scaffold00003 821787 1 T C scaffold297 ReadM SNP 0002.scaffold00003 821905 1 A T - ReadM SNP 0002.scaffold00003 822096 1 C T - Both SNP 0002.scaffold00003 822139 1 T A scaffold297 ScafM SNP 0002.scaffold00003 822307 1 A C scaffold297 ScafM SNP 0002.scaffold00003 822316 1 T G scaffold297 ScafM INDEL 0002.scaffold00003 822320 1 . A scaffold297 ScafM SNP 0002.scaffold00003 822519 1 T A scaffold297 ScafM INDEL 0002.scaffold00003 822584 1 T . scaffold297 ReadM SNP 0002.scaffold00003 825933 1 T G - ReadM SNP 0002.scaffold00003 825948 1 C A - ReadM SNP 0002.scaffold00003 825997 1 G A - ReadM SNP 0002.scaffold00003 826039 1 C T - ReadM SNP 0002.scaffold00003 826049 1 A G - ReadM SNP 0002.scaffold00003 826125 1 C T - ScafM SNP 0002.scaffold00003 826220 1 G C scaffold297 ScafM SNP 0002.scaffold00003 826259 1 G A scaffold297 ScafM SNP 0002.scaffold00003 826296 1 A G scaffold297 ReadM SNP 0002.scaffold00003 826662 1 A C - ReadM SNP 0002.scaffold00003 826734 1 A G - ReadM SNP 0002.scaffold00003 826919 1 T C - ReadM SNP 0002.scaffold00003 826922 1 G A - ReadM SNP 0002.scaffold00003 826969 1 T C - Both SNP 0002.scaffold00003 827031 1 A G scaffold297 ScafM INDEL 0002.scaffold00003 827099 15 ATGTGTGTAACCTAA ............... scaffold297 ScafM SNP 0002.scaffold00003 827129 1 A G scaffold297 Both SNP 0002.scaffold00003 827235 1 G A scaffold297 ReadM SNP 0002.scaffold00003 827274 1 T C - ReadM SNP 0002.scaffold00003 827422 1 A C - ReadM SNP 0002.scaffold00003 827458 1 C T - ReadM SNP 0002.scaffold00003 827507 1 T C - ReadM INDEL 0002.scaffold00003 827702 1 . A - ScafM SNP 0002.scaffold00003 827791 1 T C scaffold297 Both INDEL 0002.scaffold00003 827868 1 . A scaffold297 ReadM SNP 0002.scaffold00003 827960 1 A G - ReadM SNP 0002.scaffold00003 827981 1 A C - ReadM SNP 0002.scaffold00003 827991 1 A T - Both SNP 0002.scaffold00003 828068 1 T A scaffold297 Both SNP 0002.scaffold00003 828097 1 T C scaffold297 Both INDEL 0002.scaffold00003 828116 1 C . scaffold297 Both SNP 0002.scaffold00003 828159 1 A G scaffold297 Both SNP 0002.scaffold00003 828189 1 C T scaffold297 Both SNP 0002.scaffold00003 828204 1 A G scaffold297 Both SNP 0002.scaffold00003 828349 1 G T scaffold297 ReadM SNP 0002.scaffold00003 828381 1 G C - ReadM SNP 0002.scaffold00003 828473 1 C T - ReadM SNP 0002.scaffold00003 828567 1 C T - ReadM INDEL 0002.scaffold00003 828581 1 A . - ReadM SNP 0002.scaffold00003 828671 1 A G - ReadM SNP 0002.scaffold00003 828674 1 G A - ReadM SNP 0002.scaffold00003 828788 1 T C - ReadM SNP 0002.scaffold00003 828858 1 T G - ReadM SNP 0002.scaffold00003 828860 1 T A - ScafM INDEL 0002.scaffold00003 829099 9 ......... AAACCTATG scaffold297 ScafM SNP 0002.scaffold00003 829156 1 C A scaffold297 ScafM SNP 0002.scaffold00003 829171 1 T C scaffold297 ScafM SNP 0002.scaffold00003 829174 1 T C scaffold297 Both SNP 0002.scaffold00003 829293 1 G A scaffold297 ReadM SNP 0002.scaffold00003 829415 1 G C - ReadM SNP 0002.scaffold00003 829480 1 C A - ReadM SNP 0002.scaffold00003 829907 1 A T - ReadM SNP 0002.scaffold00003 829979 1 G A - ReadM SNP 0002.scaffold00003 830006 1 T C - Both SNP 0002.scaffold00003 830071 1 A C scaffold297 ReadM SNP 0002.scaffold00003 830238 1 C T - Both SNP 0002.scaffold00003 830304 1 G A scaffold297 Both SNP 0002.scaffold00003 830310 1 T C scaffold297 Both SNP 0002.scaffold00003 830435 1 G A scaffold297 Both SNP 0002.scaffold00003 830460 1 T C scaffold297 Both SNP 0002.scaffold00003 830479 1 G A scaffold297 ScafM SNP 0002.scaffold00003 830586 1 C T scaffold297 ScafM SNP 0002.scaffold00003 830589 1 G A scaffold297 Both SNP 0002.scaffold00003 830610 1 A G scaffold297 Both SNP 0002.scaffold00003 830627 1 C A scaffold297 Both SNP 0002.scaffold00003 830650 1 T C scaffold297 Both SNP 0002.scaffold00003 830714 1 G A scaffold297 Both SNP 0002.scaffold00003 830812 1 A T scaffold297 Both SNP 0002.scaffold00003 830822 1 T A scaffold297 Both SNP 0002.scaffold00003 830868 1 T A scaffold297 Both SNP 0002.scaffold00003 830903 1 C T scaffold297 ScafM SNP 0002.scaffold00003 830927 1 C T scaffold297 Both SNP 0002.scaffold00003 830966 1 T A scaffold297 Both SNP 0002.scaffold00003 830979 1 G C scaffold297 ScafM SNP 0002.scaffold00003 831037 1 T A scaffold297 ReadM SNP 0002.scaffold00003 831175 1 T G - ReadM SNP 0002.scaffold00003 831203 1 T A - Both SNP 0002.scaffold00003 831238 1 G A scaffold297 Both SNP 0002.scaffold00003 831458 1 G A scaffold297 Both SNP 0002.scaffold00003 831520 1 G A scaffold297 Both SNP 0002.scaffold00003 831585 1 G A scaffold297 ScafM SNP 0002.scaffold00003 831688 1 A C scaffold297 Both SNP 0002.scaffold00003 831768 1 T C scaffold297 Both SNP 0002.scaffold00003 831881 1 A G scaffold297 Both SNP 0002.scaffold00003 831925 1 C G scaffold297 Both SNP 0002.scaffold00003 832081 1 C G scaffold297 Both SNP 0002.scaffold00003 832212 1 A G scaffold297 Both SNP 0002.scaffold00003 832258 1 T C scaffold297 Both SNP 0002.scaffold00003 832307 1 T C scaffold297 Both SNP 0002.scaffold00003 832351 1 T G scaffold297 Both SNP 0002.scaffold00003 832396 1 A T scaffold297 Both SNP 0002.scaffold00003 832404 1 A C scaffold297 Both SNP 0002.scaffold00003 832466 1 T G scaffold297 Both SNP 0002.scaffold00003 832486 1 T C scaffold297 ReadM SNP 0002.scaffold00003 832563 1 G A - ReadM SNP 0002.scaffold00003 832645 1 G C - ReadM SNP 0002.scaffold00003 832673 1 G A - ReadM SNP 0002.scaffold00003 832965 1 G A - ReadM SNP 0002.scaffold00003 832970 1 C T - ReadM SNP 0002.scaffold00003 833039 1 C T - ReadM SNP 0002.scaffold00003 833066 1 A G - ReadM SNP 0002.scaffold00003 833131 1 C T - ReadM SNP 0002.scaffold00003 833155 1 G A - ReadM SNP 0002.scaffold00003 833169 1 C T - ReadM SNP 0002.scaffold00003 833232 1 A G - ReadM SNP 0002.scaffold00003 833262 1 G T - Both SNP 0002.scaffold00003 833583 1 G T scaffold297 Both SNP 0002.scaffold00003 833647 1 A G scaffold297 Both SNP 0002.scaffold00003 833710 1 T C scaffold297 Both SNP 0002.scaffold00003 833717 1 T C scaffold297 Both SNP 0002.scaffold00003 833749 1 A G scaffold297 Both SNP 0002.scaffold00003 833777 1 A T scaffold297 Both SNP 0002.scaffold00003 834257 1 C A scaffold297 Both SNP 0002.scaffold00003 834278 1 G T scaffold297 ReadM SNP 0002.scaffold00003 834364 1 G A - ReadM SNP 0002.scaffold00003 834385 1 A T - ReadM SNP 0002.scaffold00003 834432 1 A G - ReadM SNP 0002.scaffold00003 834555 1 T A - ReadM SNP 0002.scaffold00003 834570 1 C T - ScafM SNP 0002.scaffold00003 834654 1 T A scaffold297 ScafM SNP 0002.scaffold00003 834662 1 A G scaffold297 Both SNP 0002.scaffold00003 834681 1 A G scaffold297 Both INDEL 0002.scaffold00003 834722 1 T . scaffold297 Both SNP 0002.scaffold00003 834777 1 C G scaffold297 Both SNP 0002.scaffold00003 834923 1 A T scaffold297 Both INDEL 0002.scaffold00003 835081 1 . T scaffold297 Both SNP 0002.scaffold00003 835126 1 T G scaffold297 Both SNP 0002.scaffold00003 835328 1 T G scaffold297 Both SNP 0002.scaffold00003 835418 1 A C scaffold297 ReadM SNP 0002.scaffold00003 835687 1 G A - ReadM SNP 0002.scaffold00003 836478 1 C A - ReadM INDEL 0002.scaffold00003 836824 1 . C - ReadM SNP 0002.scaffold00003 836861 1 T A - ReadM SNP 0002.scaffold00003 836907 1 G A - ReadM INDEL 0002.scaffold00003 836922 1 . T - ReadM SNP 0002.scaffold00003 836940 1 G A - ReadM SNP 0002.scaffold00003 837052 1 C A - ReadM SNP 0002.scaffold00003 837169 1 C A - ReadM SNP 0002.scaffold00003 837179 1 A G - ReadM SNP 0002.scaffold00003 837304 1 G A - ScafM SNP 0002.scaffold00003 838350 1 G A scaffold2510 ScafM SNP 0002.scaffold00003 838398 1 A T scaffold2510 ScafM SNP 0002.scaffold00003 838422 1 G A scaffold2510 ScafM SNP 0002.scaffold00003 838477 1 A G scaffold2510 Both SNP 0002.scaffold00003 839664 1 T A scaffold297 ScafM SNP 0002.scaffold00003 839788 1 A T scaffold297 ReadM SNP 0002.scaffold00003 839824 1 G A - Both INDEL 0002.scaffold00003 839952 1 T . scaffold297 Both SNP 0002.scaffold00003 839991 1 A G scaffold297 ReadM SNP 0002.scaffold00003 840147 1 G A - ReadM SNP 0002.scaffold00003 840155 1 C A - ReadM SNP 0002.scaffold00003 840290 1 G C - Both SNP 0002.scaffold00003 840349 1 T A scaffold297 Both SNP 0002.scaffold00003 840437 1 A T scaffold297 ReadM INDEL 0002.scaffold00003 840490 3 ... AAA - Both SNP 0002.scaffold00003 840626 1 C A scaffold297 ScafM SNP 0002.scaffold00003 840629 2 CG TC scaffold297 Both SNP 0002.scaffold00003 840678 1 T A scaffold297 Both SNP 0002.scaffold00003 840797 1 A G scaffold297 ReadM INDEL 0002.scaffold00003 840812 1 A . - Both INDEL 0002.scaffold00003 840813 1 C . scaffold297 ReadM SNP 0002.scaffold00003 840933 1 A G - ReadM SNP 0002.scaffold00003 840993 1 C G - ReadM SNP 0002.scaffold00003 841004 1 G C - ReadM SNP 0002.scaffold00003 841194 1 T C - Both SNP 0002.scaffold00003 841374 1 G A scaffold297 Both SNP 0002.scaffold00003 841421 1 A G scaffold297 Both SNP 0002.scaffold00003 841506 1 A C scaffold297 Both SNP 0002.scaffold00003 841542 1 A G scaffold297 ReadM SNP 0002.scaffold00003 841660 1 A T - ReadM SNP 0002.scaffold00003 841746 1 G T - ReadM SNP 0002.scaffold00003 841900 1 A G - Both SNP 0002.scaffold00003 842142 1 C T scaffold297 Both SNP 0002.scaffold00003 842266 1 T C scaffold297 Both SNP 0002.scaffold00003 842270 1 C T scaffold297 Both SNP 0002.scaffold00003 842298 1 A C scaffold297 Both SNP 0002.scaffold00003 842360 1 T A scaffold297 ScafM SNP 0002.scaffold00003 842911 1 A G scaffold297 Both SNP 0002.scaffold00003 842936 1 T C scaffold297 Both SNP 0002.scaffold00003 842952 1 T G scaffold297 Both SNP 0002.scaffold00003 843034 1 C T scaffold297 Both SNP 0002.scaffold00003 843051 1 T G scaffold297 ReadM SNP 0002.scaffold00003 843122 1 A G - ReadM SNP 0002.scaffold00003 843174 1 G C - ReadM SNP 0002.scaffold00003 843295 1 G A - ReadM SNP 0002.scaffold00003 843307 1 T A - ReadM INDEL 0002.scaffold00003 843328 1 T . - ReadM SNP 0002.scaffold00003 843370 1 C T - ReadM SNP 0002.scaffold00003 843419 1 C T - ReadM SNP 0002.scaffold00003 843459 1 C T - ReadM SNP 0002.scaffold00003 843541 1 A G - ReadM SNP 0002.scaffold00003 843558 1 T C - Both SNP 0002.scaffold00003 844003 1 T C scaffold297 ReadM INDEL 0002.scaffold00003 844070 1 . G - ReadM SNP 0002.scaffold00003 844087 1 T C - ScafM SNP 0002.scaffold00003 844236 1 A T scaffold297 Both SNP 0002.scaffold00003 844266 1 G A scaffold297 ReadM SNP 0002.scaffold00003 844356 1 T G - ReadM SNP 0002.scaffold00003 844379 1 A G - ScafM SNP 0002.scaffold00003 844451 1 T C scaffold297 Both SNP 0002.scaffold00003 844474 1 C T scaffold297 ScafM SNP 0002.scaffold00003 844480 1 C T scaffold297 ScafM SNP 0002.scaffold00003 844525 1 T C scaffold297 Both SNP 0002.scaffold00003 844604 1 C T scaffold297 Both SNP 0002.scaffold00003 844614 1 T A scaffold297 ReadM SNP 0002.scaffold00003 844851 1 A C - Both SNP 0002.scaffold00003 844875 1 C G scaffold297 ScafM INDEL 0002.scaffold00003 844998 5 ..... TTTTT scaffold297 ScafM SNP 0002.scaffold00003 845063 1 A G scaffold297 ScafM SNP 0002.scaffold00003 845157 1 A G scaffold297 Both SNP 0002.scaffold00003 845318 1 G A scaffold297 ScafM SNP 0002.scaffold00003 845656 1 C T scaffold297 ScafM SNP 0002.scaffold00003 845666 1 T A scaffold297 ScafM INDEL 0002.scaffold00003 845677 2 AT .. scaffold297 ReadM SNP 0002.scaffold00003 845963 1 C T - ReadM INDEL 0002.scaffold00003 845966 1 A . - Both SNP 0002.scaffold00003 846035 1 T C scaffold297 Both SNP 0002.scaffold00003 846057 1 C G scaffold297 Both SNP 0002.scaffold00003 846096 1 T A scaffold297 Both INDEL 0002.scaffold00003 846365 1 . A scaffold297 ReadM SNP 0002.scaffold00003 846561 1 G A - ReadM SNP 0002.scaffold00003 846586 1 C T - Both SNP 0002.scaffold00003 846655 1 G A scaffold297 ScafM INDEL 0002.scaffold00003 846773 1 . T scaffold297 ReadM SNP 0002.scaffold00003 847838 1 G T - ReadM SNP 0002.scaffold00003 847862 1 G A - ReadM SNP 0002.scaffold00003 848411 1 G A - ReadM SNP 0002.scaffold00003 848557 1 A G - ScafM INDEL 0002.scaffold00003 848932 2 .. AA scaffold297 Both SNP 0002.scaffold00003 849039 1 T G scaffold297 Both SNP 0002.scaffold00003 851390 1 C A scaffold297 Both SNP 0002.scaffold00003 851515 1 G A scaffold297 Both SNP 0002.scaffold00003 851533 1 A T scaffold297 ScafM SNP 0002.scaffold00003 851888 1 C A scaffold297 Both SNP 0002.scaffold00003 851966 1 G T scaffold297 ReadM SNP 0002.scaffold00003 852155 1 C A - ReadM SNP 0002.scaffold00003 874680 1 A G - ReadM SNP 0002.scaffold00003 875645 1 T G - ReadM SNP 0002.scaffold00003 875792 1 T C - ReadM INDEL 0002.scaffold00003 876079 1 T . - ReadM SNP 0002.scaffold00003 876341 1 T C - ReadM SNP 0002.scaffold00003 876682 1 C A - ReadM INDEL 0002.scaffold00003 876730 1 . A - ReadM SNP 0002.scaffold00003 877521 1 G A - Both SNP 0002.scaffold00003 878982 1 C A scaffold3337 ReadM SNP 0002.scaffold00003 879545 1 T C - ReadM SNP 0002.scaffold00003 879686 1 G A - ReadM SNP 0002.scaffold00003 879841 1 C A - Both SNP 0002.scaffold00003 879888 1 T C scaffold3337 Both SNP 0002.scaffold00003 879940 1 C T scaffold3337 Both SNP 0002.scaffold00003 879989 1 A G scaffold3337 ReadM SNP 0002.scaffold00003 882210 1 T G - ReadM SNP 0002.scaffold00003 882523 1 G T - Both SNP 0002.scaffold00003 883423 1 A T scaffold3337 ReadM INDEL 0002.scaffold00003 884125 1 A . - ReadM SNP 0002.scaffold00003 884292 1 T C - ReadM SNP 0002.scaffold00003 884980 1 A T - ReadM SNP 0002.scaffold00003 886869 1 T A - ScafM SNP 0002.scaffold00003 888728 1 G C scaffold3337 Both SNP 0002.scaffold00003 889773 1 T C scaffold3337 Both SNP 0002.scaffold00003 889776 1 C T scaffold3337 ReadM INDEL 0002.scaffold00003 891075 2 GT .. - ReadM INDEL 0002.scaffold00003 891197 3 ... AAG - Both SNP 0002.scaffold00003 892380 1 G A scaffold3337 Both SNP 0002.scaffold00003 893357 1 G T scaffold3337 Both SNP 0002.scaffold00003 893635 1 T C scaffold3337 ScafM INDEL 0002.scaffold00003 895006 1 . A scaffold3337 Both SNP 0002.scaffold00003 895036 1 A G scaffold3337 Both SNP 0002.scaffold00003 895628 1 A T scaffold3337 Both INDEL 0002.scaffold00003 895650 2 .. AT scaffold3337 ReadM SNP 0002.scaffold00003 896871 1 C T - ReadM SNP 0002.scaffold00003 896905 1 C T - ScafM SNP 0002.scaffold00003 898297 1 T A scaffold3337 ScafM SNP 0002.scaffold00003 898299 1 C T scaffold3337 ScafM INDEL 0002.scaffold00003 898499 7 ....... ACTGAAT scaffold3337 Both SNP 0002.scaffold00003 898537 1 A C scaffold3337 ScafM INDEL 0002.scaffold00003 899388 28 ............................ AACACACACACACACACACACACACACA scaffold3337 ScafM INDEL 0002.scaffold00003 899389 1 . A scaffold3337 ScafM INDEL 0002.scaffold00003 899392 1 . A scaffold3337 ScafM INDEL 0002.scaffold00003 899565 1 . A scaffold3337 ScafM SNP 0002.scaffold00003 899627 1 C T scaffold3337 Both SNP 0002.scaffold00003 899647 1 G A scaffold3337 Both SNP 0002.scaffold00003 902153 1 T C scaffold3337 Both SNP 0002.scaffold00003 903592 1 A G scaffold3337 ReadM SNP 0002.scaffold00003 904743 1 C T - ReadM SNP 0002.scaffold00003 905857 1 T C - Both SNP 0002.scaffold00003 906116 1 G A scaffold3337 Both SNP 0002.scaffold00003 907403 1 A G scaffold3337 Both SNP 0002.scaffold00003 909340 1 A C scaffold3337 Both SNP 0002.scaffold00003 909357 1 T G scaffold3337 ReadM SNP 0002.scaffold00003 909407 1 G A - ReadM SNP 0002.scaffold00003 910690 1 G A - Both SNP 0002.scaffold00003 910780 1 G C scaffold3337 Both SNP 0002.scaffold00003 911052 1 G A scaffold3337 ScafM SNP 0002.scaffold00003 911243 1 T C scaffold3337 ReadM SNP 0002.scaffold00003 912379 1 A T - ReadM SNP 0002.scaffold00003 912724 1 G A - ReadM SNP 0002.scaffold00003 912924 1 C T - ReadM SNP 0002.scaffold00003 914769 1 T C - ReadM SNP 0002.scaffold00003 915058 2 AA TG - ReadM SNP 0002.scaffold00003 915264 1 A C - ReadM SNP 0002.scaffold00003 916601 1 C T - Both SNP 0002.scaffold00003 917766 1 T C scaffold3337 Both SNP 0002.scaffold00003 918651 1 C T scaffold3337 Both SNP 0002.scaffold00003 918780 1 G A scaffold3337 Both SNP 0002.scaffold00003 919206 1 G A scaffold3337 Both SNP 0002.scaffold00003 919383 1 G A scaffold3337 ScafM INDEL 0002.scaffold00003 920042 1 T . scaffold3337 ScafM SNP 0002.scaffold00003 920069 1 A G scaffold3337 ScafM INDEL 0002.scaffold00003 920390 2 TT .. scaffold3337 Both SNP 0002.scaffold00003 920933 1 C G scaffold3337 ReadM SNP 0002.scaffold00003 921291 1 A G - ReadM SNP 0002.scaffold00003 923137 1 C A - ReadM SNP 0002.scaffold00003 924186 1 G A - Both SNP 0002.scaffold00003 926121 1 G A scaffold2835 Both SNP 0002.scaffold00003 926291 1 A G scaffold2835 Both SNP 0002.scaffold00003 926518 1 A G scaffold2835 Both SNP 0002.scaffold00003 926805 1 T C scaffold2835 Both SNP 0002.scaffold00003 928373 1 T A scaffold2835 ReadM SNP 0002.scaffold00003 928911 1 G A - Both SNP 0002.scaffold00003 929295 1 C G scaffold2835 Both SNP 0002.scaffold00003 930245 1 G A scaffold2835 Both SNP 0002.scaffold00003 930670 1 A C scaffold2835 Both SNP 0002.scaffold00003 930850 1 G A scaffold2835 Both SNP 0002.scaffold00003 931113 1 A T scaffold2835 Both SNP 0002.scaffold00003 932315 1 A C scaffold2835 Both SNP 0002.scaffold00003 932377 1 C T scaffold2835 Both SNP 0002.scaffold00003 932959 1 C G scaffold2835 Both SNP 0002.scaffold00003 933177 1 G T scaffold2835 Both SNP 0002.scaffold00003 933388 1 G A scaffold2835 Both SNP 0002.scaffold00003 934216 1 G A scaffold2835 Both SNP 0002.scaffold00003 934377 1 G A scaffold2835 ScafM SNP 0002.scaffold00003 935291 1 T G scaffold2835 ReadM SNP 0002.scaffold00003 937738 1 A G - ReadM SNP 0002.scaffold00003 938085 1 C A - ReadM INDEL 0002.scaffold00003 939501 1 . A - ReadM SNP 0002.scaffold00003 944582 1 C T - ReadM SNP 0002.scaffold00003 944828 1 G T - Both SNP 0002.scaffold00003 945461 1 C G scaffold6995 Both SNP 0002.scaffold00003 946752 1 G A scaffold6995 Both SNP 0002.scaffold00003 947018 1 A G scaffold6995 Both SNP 0002.scaffold00003 947043 1 G A scaffold6995 Both SNP 0002.scaffold00003 947091 1 A G scaffold6995 Both SNP 0002.scaffold00003 947407 1 A G scaffold6995 Both SNP 0002.scaffold00003 947471 1 A G scaffold6995 Both SNP 0002.scaffold00003 947569 1 C G scaffold6995 Both SNP 0002.scaffold00003 947578 1 A G scaffold6995 Both SNP 0002.scaffold00003 947852 1 G A scaffold6995 ScafM SNP 0002.scaffold00003 947904 1 C G scaffold6995 ScafM SNP 0002.scaffold00003 948039 1 A G scaffold6995 ScafM SNP 0002.scaffold00003 948073 1 A G scaffold6995 Both SNP 0002.scaffold00003 948770 1 G A scaffold6995 Both SNP 0002.scaffold00003 949878 1 C A scaffold6995 ScafM SNP 0002.scaffold00003 950016 1 C T scaffold6995 ScafM INDEL 0002.scaffold00003 950116 11 ACATGGCGAGT ........... scaffold6995 Both SNP 0002.scaffold00003 950170 1 G T scaffold6995 Both SNP 0002.scaffold00003 950248 1 T C scaffold6995 Both SNP 0002.scaffold00003 950262 1 T A scaffold6995 Both INDEL 0002.scaffold00003 950723 1 A . scaffold6995 ReadM SNP 0002.scaffold00003 950995 1 G A - ReadM SNP 0002.scaffold00003 951229 1 A G - ReadM SNP 0002.scaffold00003 951412 1 T G - ReadM SNP 0002.scaffold00003 951712 1 T A - ReadM SNP 0002.scaffold00003 951978 1 T C - ReadM SNP 0002.scaffold00003 953306 1 C T - ScafM INDEL 0002.scaffold00003 955055 5 GAAAG ..... scaffold6995 Both SNP 0002.scaffold00003 957143 1 C T scaffold6995 Both SNP 0002.scaffold00003 957175 1 T C scaffold6995 ReadM INDEL 0002.scaffold00003 957346 2 GA .. - Both SNP 0002.scaffold00003 957535 1 C G scaffold6995 Both SNP 0002.scaffold00003 958576 1 A G scaffold6995 Both INDEL 0002.scaffold00003 958650 2 CC .. scaffold6995 Both SNP 0002.scaffold00003 958664 1 G A scaffold6995 ScafM SNP 0002.scaffold00003 959346 1 A G scaffold6995 Both SNP 0002.scaffold00003 959781 1 A G scaffold6995 ReadM SNP 0002.scaffold00003 961785 1 A C - ReadM SNP 0002.scaffold00003 962205 1 A C - ScafM INDEL 0002.scaffold00003 964144 7 ACACAAC ....... scaffold6995 ScafM INDEL 0002.scaffold00003 964165 1 . C scaffold6995 ReadM SNP 0002.scaffold00003 964345 1 T G - ReadM SNP 0002.scaffold00003 965363 1 C G - Both SNP 0002.scaffold00003 965469 1 T G scaffold6995 Both SNP 0002.scaffold00003 965517 1 C A scaffold6995 Both SNP 0002.scaffold00003 966142 1 T C scaffold6995 Both SNP 0002.scaffold00003 966701 1 C A scaffold6995 ReadM SNP 0002.scaffold00003 967739 1 C T - Both SNP 0002.scaffold00003 968150 1 A T scaffold6995 Both SNP 0002.scaffold00003 968156 1 C A scaffold6995 Both SNP 0002.scaffold00003 968162 1 G T scaffold6995 Both SNP 0002.scaffold00003 968289 1 T C scaffold6995 Both SNP 0002.scaffold00003 968412 1 A T scaffold6995 Both SNP 0002.scaffold00003 968535 1 G A scaffold6995 ScafM SNP 0002.scaffold00003 968561 1 C G scaffold6995 ScafM SNP 0002.scaffold00003 968567 1 A G scaffold6995 ScafM SNP 0002.scaffold00003 968578 1 A T scaffold6995 ScafM SNP 0002.scaffold00003 968586 1 C T scaffold6995 Both SNP 0002.scaffold00003 968667 1 C T scaffold6995 ScafM INDEL 0002.scaffold00003 968835 50 .................................................. AGGAAACCAGTTTGACTTTAGATACCCAATCAACTTGTGATATTTTTTAG scaffold6995 ScafM SNP 0002.scaffold00003 968868 1 A G scaffold6995 ScafM SNP 0002.scaffold00003 968878 1 C A scaffold6995 ScafM SNP 0002.scaffold00003 969382 1 G T C13502298 ScafM SNP 0002.scaffold00003 969386 1 A C C13502298 ScafM SNP 0002.scaffold00003 969390 1 A G C13502298 ScafM SNP 0002.scaffold00003 969419 2 CA GT C13502298 ScafM SNP 0002.scaffold00003 969444 1 T A C13502298 ScafM SNP 0002.scaffold00003 969485 1 T C C13502298 ScafM SNP 0002.scaffold00003 969488 1 T C C13502298 ScafM SNP 0002.scaffold00003 969493 1 G A C13502298 ScafM SNP 0002.scaffold00003 969505 1 C T C13502298 ScafM SNP 0002.scaffold00003 969518 1 T C C13502298 ScafM SNP 0002.scaffold00003 969522 1 G A C13502298 ScafM SNP 0002.scaffold00003 969558 1 G T C13502298 ScafM SNP 0002.scaffold00003 969577 1 C T C13502298 ScafM SNP 0002.scaffold00003 969629 1 G C C13502298 ScafM SNP 0002.scaffold00003 969646 1 G A C13502298 ScafM SNP 0002.scaffold00003 969655 1 C T C13502298 ScafM SNP 0002.scaffold00003 969865 1 T C C13502298 ScafM SNP 0002.scaffold00003 969893 1 G A C13502298 ScafM SNP 0002.scaffold00003 969907 1 T C C13502298 ReadM SNP 0002.scaffold00003 970088 1 C A - ReadM SNP 0002.scaffold00003 970111 1 T C - ReadM SNP 0002.scaffold00003 970180 1 C T - ScafM INDEL 0002.scaffold00003 977841 1 A . scaffold11267 ScafM SNP 0002.scaffold00003 977847 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 977857 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 977869 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 977895 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 977938 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978373 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 978375 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 978384 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 978389 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978393 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978450 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978456 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 978463 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978470 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978472 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 978496 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978501 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 978505 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 978513 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 978528 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978533 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 978535 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 978537 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978561 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 978590 1 G A scaffold11267 ScafM INDEL 0002.scaffold00003 978628 2 CT .A scaffold11267 ScafM SNP 0002.scaffold00003 978640 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 978653 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978656 1 A T scaffold11267 ScafM INDEL 0002.scaffold00003 978664 1 G . scaffold11267 ScafM SNP 0002.scaffold00003 978676 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 978680 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978682 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 978695 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 978703 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978709 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978713 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 978720 2 CA TT scaffold11267 ScafM SNP 0002.scaffold00003 978750 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 978769 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 978771 1 T C scaffold11267 ReadM SNP 0002.scaffold00003 981709 1 A G - ReadM SNP 0002.scaffold00003 981739 1 G A - ReadM SNP 0002.scaffold00003 981803 1 C G - ReadM INDEL 0002.scaffold00003 981810 1 . A - ReadM SNP 0002.scaffold00003 982059 1 G T - ReadM SNP 0002.scaffold00003 982069 1 C G - ReadM SNP 0002.scaffold00003 982135 1 T C - ReadM SNP 0002.scaffold00003 982166 1 G C - ReadM SNP 0002.scaffold00003 982254 1 T A - ReadM SNP 0002.scaffold00003 982386 1 T A - ReadM SNP 0002.scaffold00003 982582 1 C G - ReadM SNP 0002.scaffold00003 982620 1 C A - ReadM SNP 0002.scaffold00003 982630 1 T C - ReadM SNP 0002.scaffold00003 982651 1 T C - Both SNP 0002.scaffold00003 982728 1 G T scaffold11267 Both SNP 0002.scaffold00003 982734 1 A G scaffold11267 Both SNP 0002.scaffold00003 982741 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 982805 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 982828 2 TA AT scaffold11267 ScafM INDEL 0002.scaffold00003 982835 1 T . scaffold11267 ScafM INDEL 0002.scaffold00003 982837 1 C . scaffold11267 ScafM SNP 0002.scaffold00003 982860 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 982893 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 982895 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 982915 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 982935 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 982942 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 982948 1 T G scaffold11267 ReadM SNP 0002.scaffold00003 983587 1 G C - ReadM SNP 0002.scaffold00003 984748 1 T C - ReadM SNP 0002.scaffold00003 984752 1 C A - ReadM INDEL 0002.scaffold00003 984911 1 T . - ReadM SNP 0002.scaffold00003 984929 1 C A - ReadM SNP 0002.scaffold00003 985014 1 A G - ReadM INDEL 0002.scaffold00003 985039 1 . T - ReadM SNP 0002.scaffold00003 985050 1 G T - ReadM SNP 0002.scaffold00003 985161 1 C T - ReadM SNP 0002.scaffold00003 985164 1 A G - ReadM SNP 0002.scaffold00003 986135 1 A C - ReadM SNP 0002.scaffold00003 986161 1 A C - ReadM SNP 0002.scaffold00003 986514 1 T C - ReadM SNP 0002.scaffold00003 986567 1 G T - ReadM SNP 0002.scaffold00003 986571 1 T A - ReadM SNP 0002.scaffold00003 986627 1 A T - ReadM SNP 0002.scaffold00003 987011 1 A T - ReadM SNP 0002.scaffold00003 989573 1 C T - ReadM SNP 0002.scaffold00003 989668 1 G A - ReadM SNP 0002.scaffold00003 989712 1 T C - Both SNP 0002.scaffold00003 989779 1 C T scaffold11267 Both SNP 0002.scaffold00003 989791 1 A G scaffold11267 Both SNP 0002.scaffold00003 989863 1 T C scaffold11267 Both SNP 0002.scaffold00003 989922 1 C T scaffold11267 Both SNP 0002.scaffold00003 989967 1 T G scaffold11267 Both SNP 0002.scaffold00003 990032 1 A G scaffold11267 Both SNP 0002.scaffold00003 990047 1 T C scaffold11267 Both SNP 0002.scaffold00003 990072 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 990132 1 G C scaffold11267 ScafM INDEL 0002.scaffold00003 990168 5 ..... AGACC scaffold11267 ScafM INDEL 0002.scaffold00003 990170 2 .. AG scaffold11267 ScafM SNP 0002.scaffold00003 990191 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 990199 1 C T scaffold11267 ScafM INDEL 0002.scaffold00003 990210 1 T . scaffold11267 ScafM INDEL 0002.scaffold00003 990223 1 G . scaffold11267 ScafM SNP 0002.scaffold00003 990247 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 990268 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 990275 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 990286 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 990320 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 990990 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 990993 2 GG TC scaffold11267 ScafM INDEL 0002.scaffold00003 991006 2 .. AA scaffold11267 ScafM SNP 0002.scaffold00003 991044 1 C A scaffold11267 ScafM INDEL 0002.scaffold00003 991070 1 . C scaffold11267 ScafM SNP 0002.scaffold00003 991093 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 991113 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 991135 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 991141 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 991160 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 991195 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 991257 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 991971 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 991986 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 992002 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 992017 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 992047 1 T A scaffold11267 ScafM INDEL 0002.scaffold00003 992067 12 ............ AAAAAAGAAAAA scaffold11267 Both INDEL 0002.scaffold00003 992261 1 . A scaffold11267 Both SNP 0002.scaffold00003 992396 1 G C scaffold11267 Both INDEL 0002.scaffold00003 992415 1 T . scaffold11267 Both SNP 0002.scaffold00003 992796 1 T G scaffold11267 Both SNP 0002.scaffold00003 992865 1 G A scaffold11267 Both SNP 0002.scaffold00003 992889 1 T C scaffold11267 Both SNP 0002.scaffold00003 992893 1 A T scaffold11267 Both SNP 0002.scaffold00003 993012 1 A C scaffold11267 Both SNP 0002.scaffold00003 993126 1 T G scaffold11267 Both SNP 0002.scaffold00003 993180 1 G A scaffold11267 Both SNP 0002.scaffold00003 993215 1 G T scaffold11267 Both SNP 0002.scaffold00003 993222 1 A G scaffold11267 Both SNP 0002.scaffold00003 993377 1 C A scaffold11267 Both SNP 0002.scaffold00003 993387 1 G C scaffold11267 Both SNP 0002.scaffold00003 993429 1 C G scaffold11267 Both SNP 0002.scaffold00003 993446 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 993545 1 A G scaffold11267 ScafM INDEL 0002.scaffold00003 993833 18 .................. GGGTAGGGGTAGGCGTAG scaffold11267 ScafM SNP 0002.scaffold00003 993846 1 C G scaffold11267 ScafM INDEL 0002.scaffold00003 993939 1 . T scaffold11267 ScafM INDEL 0002.scaffold00003 993968 1 A . scaffold11267 ScafM SNP 0002.scaffold00003 994040 1 G A scaffold11267 Both SNP 0002.scaffold00003 994386 1 A T scaffold11267 Both INDEL 0002.scaffold00003 994398 1 G . scaffold11267 ScafM SNP 0002.scaffold00003 994444 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 994459 1 G C scaffold11267 ScafM INDEL 0002.scaffold00003 994499 1 . C scaffold11267 ScafM SNP 0002.scaffold00003 994501 3 AGG GTT scaffold11267 Both SNP 0002.scaffold00003 994521 1 C A scaffold11267 Both SNP 0002.scaffold00003 994546 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 994799 1 T G scaffold11267 ScafM INDEL 0002.scaffold00003 994806 10 .......... ATGTTATATC scaffold11267 ScafM INDEL 0002.scaffold00003 994814 1 . T scaffold11267 ScafM INDEL 0002.scaffold00003 994857 4 .... TGTG scaffold11267 Both INDEL 0002.scaffold00003 994885 1 . T scaffold11267 Both SNP 0002.scaffold00003 994919 1 C G scaffold11267 Both SNP 0002.scaffold00003 994926 1 G A scaffold11267 ScafM INDEL 0002.scaffold00003 994968 8 ........ AGAGAGAG scaffold11267 Both SNP 0002.scaffold00003 994995 1 G A scaffold11267 Both SNP 0002.scaffold00003 995025 1 G C scaffold11267 Both SNP 0002.scaffold00003 995137 1 T A scaffold11267 Both SNP 0002.scaffold00003 995272 1 A G scaffold11267 Both SNP 0002.scaffold00003 995287 1 A C scaffold11267 ScafM INDEL 0002.scaffold00003 995303 4 .... ATTG scaffold11267 ScafM SNP 0002.scaffold00003 995305 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 995317 1 A T scaffold11267 ScafM SNP 0002.scaffold00003 995461 1 G A scaffold11267 ScafM INDEL 0002.scaffold00003 995470 2 .. CT scaffold11267 ScafM INDEL 0002.scaffold00003 995472 5 ..... AAGGC scaffold11267 ScafM SNP 0002.scaffold00003 995490 1 T A scaffold11267 ScafM INDEL 0002.scaffold00003 995494 3 ... AAT scaffold11267 ScafM INDEL 0002.scaffold00003 995530 4 TACA .... scaffold11267 ScafM SNP 0002.scaffold00003 995536 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 995542 1 A G scaffold11267 Both SNP 0002.scaffold00003 995563 1 C T scaffold11267 ScafM INDEL 0002.scaffold00003 995655 6 ...... TTTTCC scaffold11267 ScafM SNP 0002.scaffold00003 995673 2 AT CA scaffold11267 ScafM SNP 0002.scaffold00003 995786 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 995792 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 995797 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 995814 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 995822 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 995922 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 995932 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 995935 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 995937 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 995950 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 996255 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 996276 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 996288 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 996292 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 996361 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 996426 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 996444 1 C T scaffold11267 ScafM INDEL 0002.scaffold00003 997509 1 A . scaffold11267 ScafM SNP 0002.scaffold00003 997575 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 997621 1 G A scaffold11267 Both SNP 0002.scaffold00003 997648 1 C A scaffold11267 ReadM SNP 0002.scaffold00003 997744 1 A G - ReadM SNP 0002.scaffold00003 997746 1 C T - ScafM SNP 0002.scaffold00003 998265 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 998279 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 998288 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998323 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998394 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 998396 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 998421 1 A G scaffold11267 ScafM INDEL 0002.scaffold00003 998451 1 T . scaffold11267 ScafM SNP 0002.scaffold00003 998460 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 998466 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998469 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 998488 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998497 1 G A scaffold11267 ScafM INDEL 0002.scaffold00003 998505 1 . A scaffold11267 Both SNP 0002.scaffold00003 998557 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998624 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 998631 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 998634 1 A G scaffold11267 ReadM SNP 0002.scaffold00003 998972 1 G A - ReadM SNP 0002.scaffold00003 999027 1 C A - ReadM SNP 0002.scaffold00003 999049 1 C T - Both SNP 0002.scaffold00003 999112 1 C T scaffold11267 ScafM INDEL 0002.scaffold00003 999173 4 ...A GCGT scaffold11267 ScafM SNP 0002.scaffold00003 999185 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 999198 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 999221 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 999231 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 999246 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 999249 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 999278 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 999280 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 999326 1 A G scaffold11267 ScafM INDEL 0002.scaffold00003 999363 3 TAA ... scaffold11267 ScafM SNP 0002.scaffold00003 999367 1 T G scaffold11267 ScafM SNP 0002.scaffold00003 999375 1 A G scaffold11267 Both INDEL 0002.scaffold00003 999444 1 . T scaffold11267 Both SNP 0002.scaffold00003 999464 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 999476 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 999513 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 999517 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 999556 1 A T scaffold11267 ScafM SNP 0002.scaffold00003 999568 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 999591 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 999637 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 999659 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 999669 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 999676 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 999736 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 999747 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 999780 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 999820 2 AA TG scaffold11267 ScafM SNP 0002.scaffold00003 999857 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1019196 1 A G scaffold11267 ScafM INDEL 0002.scaffold00003 1019219 1 . G scaffold11267 ScafM INDEL 0002.scaffold00003 1019328 1 . A scaffold11267 ScafM SNP 0002.scaffold00003 1019346 1 A T scaffold11267 ScafM SNP 0002.scaffold00003 1019351 1 T A scaffold11267 ScafM SNP 0002.scaffold00003 1019360 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1019363 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1019366 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1019387 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 1019442 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1019449 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1019483 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 1019501 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1019522 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1019527 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 1019552 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1019585 1 T C scaffold11267 ScafM INDEL 0002.scaffold00003 1019589 2 .. GG scaffold11267 ScafM SNP 0002.scaffold00003 1019593 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1019643 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1019652 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 1019656 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1019658 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1019685 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1019697 1 A T scaffold11267 ScafM SNP 0002.scaffold00003 1019711 1 A T scaffold11267 ScafM INDEL 0002.scaffold00003 1020421 3 CTT ... scaffold11267 ScafM SNP 0002.scaffold00003 1020443 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1020454 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020464 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1020493 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 1020522 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020536 2 TA GG scaffold11267 ScafM SNP 0002.scaffold00003 1020542 1 A T scaffold11267 ScafM SNP 0002.scaffold00003 1020552 1 C G scaffold11267 ScafM SNP 0002.scaffold00003 1020554 1 G T scaffold11267 ScafM SNP 0002.scaffold00003 1020570 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 1020613 1 C A scaffold11267 Both SNP 0002.scaffold00003 1020657 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 1020702 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020728 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1020730 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020733 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1020739 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1020761 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 1020767 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 1020769 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020850 1 G A scaffold11267 ScafM SNP 0002.scaffold00003 1020872 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1020874 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020896 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020917 1 G C scaffold11267 ScafM SNP 0002.scaffold00003 1020933 1 C A scaffold11267 ScafM SNP 0002.scaffold00003 1020935 1 A G scaffold11267 ScafM SNP 0002.scaffold00003 1020943 1 C T scaffold11267 ScafM SNP 0002.scaffold00003 1021019 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1021031 2 TG CA scaffold11267 ScafM SNP 0002.scaffold00003 1021038 1 A C scaffold11267 ScafM SNP 0002.scaffold00003 1021051 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1021053 1 T C scaffold11267 ScafM INDEL 0002.scaffold00003 1021055 3 TAT ... scaffold11267 ScafM INDEL 0002.scaffold00003 1021062 2 .. CG scaffold11267 ScafM SNP 0002.scaffold00003 1021074 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1021120 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1021768 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1021793 1 T C scaffold11267 ScafM SNP 0002.scaffold00003 1023239 1 G A scaffold10485 ScafM INDEL 0002.scaffold00003 1023261 4 .... AAAA scaffold10485 ScafM SNP 0002.scaffold00003 1023296 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1023310 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1023434 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1023825 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1023845 1 T A scaffold10485 Both SNP 0002.scaffold00003 1023862 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1023933 1 T C scaffold10485 ScafM INDEL 0002.scaffold00003 1023967 1 A . scaffold10485 ScafM INDEL 0002.scaffold00003 1023970 1 . C scaffold10485 ScafM SNP 0002.scaffold00003 1023996 1 A T scaffold10485 ReadM SNP 0002.scaffold00003 1024109 1 A G - ScafM SNP 0002.scaffold00003 1024315 2 CC TT scaffold10485 ScafM SNP 0002.scaffold00003 1024336 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1024343 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1024354 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1024381 1 G T scaffold10485 ScafM SNP 0002.scaffold00003 1024408 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1024428 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1024445 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1024448 1 G T scaffold10485 ScafM SNP 0002.scaffold00003 1024466 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1024469 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1024544 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1024567 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1024569 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1024582 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1024588 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1024591 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1024606 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1024610 1 G T scaffold10485 ScafM SNP 0002.scaffold00003 1024613 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1024627 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1024665 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1024697 2 GG AA scaffold10485 ScafM SNP 0002.scaffold00003 1024731 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1024756 1 C T scaffold10485 Both SNP 0002.scaffold00003 1024783 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1025001 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1025012 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1025170 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1025201 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1025210 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1025252 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1025254 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1025268 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1025276 1 A C scaffold10485 ScafM SNP 0002.scaffold00003 1025594 1 G C scaffold10485 Both SNP 0002.scaffold00003 1025607 1 C G scaffold10485 Both SNP 0002.scaffold00003 1025659 1 T A scaffold10485 Both INDEL 0002.scaffold00003 1025692 1 . T scaffold10485 ScafM SNP 0002.scaffold00003 1025740 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1025769 2 CA AC scaffold10485 ScafM SNP 0002.scaffold00003 1026382 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1026386 1 C G scaffold10485 Both SNP 0002.scaffold00003 1026434 1 A G scaffold10485 Both SNP 0002.scaffold00003 1026537 1 G C scaffold10485 Both SNP 0002.scaffold00003 1026567 1 A T scaffold10485 Both SNP 0002.scaffold00003 1026668 1 G A scaffold10485 Both SNP 0002.scaffold00003 1026959 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1027220 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1027223 1 T G scaffold10485 ReadM SNP 0002.scaffold00003 1027304 1 T C - ReadM INDEL 0002.scaffold00003 1027364 1 . T - ScafM SNP 0002.scaffold00003 1027564 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1027601 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1027627 2 CT TC scaffold10485 ScafM SNP 0002.scaffold00003 1027639 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1027652 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1027654 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1027662 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1027737 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1027741 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1027755 1 G A scaffold10485 ScafM INDEL 0002.scaffold00003 1027763 1 . T scaffold10485 ScafM INDEL 0002.scaffold00003 1027781 3 ... AAA scaffold10485 ScafM SNP 0002.scaffold00003 1027832 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1027856 1 T A scaffold10485 ScafM INDEL 0002.scaffold00003 1027873 2 .. GT scaffold10485 ScafM SNP 0002.scaffold00003 1027875 1 A G scaffold10485 ScafM INDEL 0002.scaffold00003 1027882 1 . A scaffold10485 ScafM SNP 0002.scaffold00003 1027923 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1027930 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1027949 1 C G scaffold10485 ScafM SNP 0002.scaffold00003 1027994 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1028025 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1028033 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1028050 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1028057 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1028059 1 C G scaffold10485 ScafM SNP 0002.scaffold00003 1028092 2 CC AA scaffold10485 ScafM SNP 0002.scaffold00003 1028099 2 TT AA scaffold10485 ScafM SNP 0002.scaffold00003 1028113 1 A G scaffold10485 ScafM INDEL 0002.scaffold00003 1028115 5 ATTAA ..... scaffold10485 ScafM INDEL 0002.scaffold00003 1028173 14 ATGTGCAGCGAGAA .............. scaffold10485 ScafM INDEL 0002.scaffold00003 1028189 2 AC .. scaffold10485 ScafM INDEL 0002.scaffold00003 1028195 1 A . scaffold10485 ScafM INDEL 0002.scaffold00003 1028198 6 TTAAGC ...... scaffold10485 ScafM INDEL 0002.scaffold00003 1028207 3 AAT ... scaffold10485 ScafM INDEL 0002.scaffold00003 1028267 1 . A scaffold10485 ScafM INDEL 0002.scaffold00003 1028275 1 T . scaffold10485 ScafM SNP 0002.scaffold00003 1028278 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1034182 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1034200 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1034212 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1034223 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1034279 2 AA GG scaffold10485 ScafM SNP 0002.scaffold00003 1034296 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1034318 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1034323 1 C T scaffold10485 ScafM INDEL 0002.scaffold00003 1034334 1 . G scaffold10485 ScafM SNP 0002.scaffold00003 1034338 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1034346 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1034355 1 G T scaffold10485 ScafM SNP 0002.scaffold00003 1034409 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1034415 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1034424 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1034430 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1034444 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1034447 1 G A scaffold10485 ScafM INDEL 0002.scaffold00003 1034453 2 CA .T scaffold10485 ScafM SNP 0002.scaffold00003 1034464 1 A C scaffold10485 ScafM SNP 0002.scaffold00003 1034497 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1034509 1 G T scaffold10485 ScafM SNP 0002.scaffold00003 1034524 1 C G scaffold10485 ScafM INDEL 0002.scaffold00003 1034538 12 ............ AGAACCTGTTTG scaffold10485 Both SNP 0002.scaffold00003 1034582 1 G A scaffold10485 ReadM SNP 0002.scaffold00003 1034630 1 G T - ScafM SNP 0002.scaffold00003 1034734 2 TG AA scaffold10485 ScafM SNP 0002.scaffold00003 1034744 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1034750 1 C T scaffold10485 Both INDEL 0002.scaffold00003 1034812 1 . A scaffold10485 Both SNP 0002.scaffold00003 1034818 1 C A scaffold10485 ScafM INDEL 0002.scaffold00003 1034899 8 ........ AATTTTCG scaffold10485 ScafM INDEL 0002.scaffold00003 1034900 5 ..... GAAAA scaffold10485 ScafM INDEL 0002.scaffold00003 1034902 4 .... GAGA scaffold10485 ScafM INDEL 0002.scaffold00003 1034905 5 ..... GAGCA scaffold10485 ScafM INDEL 0002.scaffold00003 1034907 1 . A scaffold10485 ScafM INDEL 0002.scaffold00003 1034908 1 . A scaffold10485 ScafM SNP 0002.scaffold00003 1034911 1 C A scaffold10485 ScafM INDEL 0002.scaffold00003 1034912 1 . G scaffold10485 ScafM INDEL 0002.scaffold00003 1034915 2 .. TG scaffold10485 ScafM SNP 0002.scaffold00003 1034916 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1034918 5 AATCC GGGAG scaffold10485 ScafM INDEL 0002.scaffold00003 1034924 3 .CT TGA scaffold10485 ScafM SNP 0002.scaffold00003 1034974 2 TG CA scaffold10485 ScafM SNP 0002.scaffold00003 1034984 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1035003 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1035012 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1035025 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1035027 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1035097 2 AG TT scaffold10485 Both SNP 0002.scaffold00003 1035152 1 T C scaffold10485 ReadM SNP 0002.scaffold00003 1035205 1 A C - ReadM SNP 0002.scaffold00003 1035353 1 C T - ReadM SNP 0002.scaffold00003 1035571 1 C A - ReadM INDEL 0002.scaffold00003 1035581 1 . A - ScafM SNP 0002.scaffold00003 1035646 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1035668 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1035675 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1035693 1 G A scaffold10485 ReadM SNP 0002.scaffold00003 1036022 1 A G - ReadM SNP 0002.scaffold00003 1036027 1 G A - ReadM SNP 0002.scaffold00003 1036063 1 T A - ReadM SNP 0002.scaffold00003 1036631 1 T C - Both SNP 0002.scaffold00003 1036653 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1036723 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1036733 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1036737 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1036743 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1036814 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1036830 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1036844 1 G A scaffold10485 Both SNP 0002.scaffold00003 1036870 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1036885 1 T G scaffold10485 Both SNP 0002.scaffold00003 1036906 1 A G scaffold10485 Both SNP 0002.scaffold00003 1036968 1 G A scaffold10485 ReadM SNP 0002.scaffold00003 1036978 1 A G - ReadM SNP 0002.scaffold00003 1036991 1 T C - ReadM SNP 0002.scaffold00003 1049132 1 C A - ReadM SNP 0002.scaffold00003 1049184 1 A G - ReadM SNP 0002.scaffold00003 1049210 1 G C - ReadM SNP 0002.scaffold00003 1049229 1 C G - ReadM SNP 0002.scaffold00003 1049404 1 A C - ReadM SNP 0002.scaffold00003 1049594 1 T C - ReadM SNP 0002.scaffold00003 1049626 1 A C - ReadM SNP 0002.scaffold00003 1049928 1 G A - ReadM SNP 0002.scaffold00003 1049944 1 G A - ReadM INDEL 0002.scaffold00003 1049960 1 . G - ReadM SNP 0002.scaffold00003 1050071 1 A G - ReadM SNP 0002.scaffold00003 1050095 1 T C - ScafM SNP 0002.scaffold00003 1050652 1 T G scaffold10485 ScafM SNP 0002.scaffold00003 1050655 2 CG AT scaffold10485 ScafM SNP 0002.scaffold00003 1050661 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1050681 2 TT GA scaffold10485 ScafM SNP 0002.scaffold00003 1050705 1 A T scaffold10485 ScafM SNP 0002.scaffold00003 1050713 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1050716 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1050907 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1050918 1 G C scaffold10485 ScafM SNP 0002.scaffold00003 1050921 1 A C scaffold10485 ScafM SNP 0002.scaffold00003 1050933 1 G A scaffold10485 ScafM INDEL 0002.scaffold00003 1050973 1 . G scaffold10485 ScafM SNP 0002.scaffold00003 1050985 1 C T scaffold10485 ReadM SNP 0002.scaffold00003 1051057 1 A G - ReadM SNP 0002.scaffold00003 1051163 1 G T - ReadM SNP 0002.scaffold00003 1051183 1 C T - ReadM SNP 0002.scaffold00003 1051257 1 G A - Both SNP 0002.scaffold00003 1051298 1 T G scaffold10485 ReadM SNP 0002.scaffold00003 1051355 1 A G - ReadM SNP 0002.scaffold00003 1051359 1 C T - ReadM SNP 0002.scaffold00003 1051402 1 A C - ReadM SNP 0002.scaffold00003 1051664 1 G A - ReadM SNP 0002.scaffold00003 1051712 1 T C - ReadM SNP 0002.scaffold00003 1051732 1 G T - ScafM SNP 0002.scaffold00003 1052594 1 C T scaffold10485 ScafM INDEL 0002.scaffold00003 1052606 1 . T scaffold10485 ScafM SNP 0002.scaffold00003 1052633 1 C T scaffold10485 ReadM SNP 0002.scaffold00003 1052806 1 T A - ReadM SNP 0002.scaffold00003 1052870 1 G T - ReadM SNP 0002.scaffold00003 1053078 1 A G - ReadM SNP 0002.scaffold00003 1053120 1 T G - ReadM SNP 0002.scaffold00003 1053210 1 C T - ScafM SNP 0002.scaffold00003 1054179 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1054181 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1054193 2 AA TT scaffold10485 ScafM SNP 0002.scaffold00003 1054219 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1054224 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1054231 1 T C scaffold10485 ScafM SNP 0002.scaffold00003 1054239 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1054254 1 C A scaffold10485 ScafM SNP 0002.scaffold00003 1054260 2 AT TA scaffold10485 Both SNP 0002.scaffold00003 1054305 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1054408 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1054443 1 G A scaffold10485 ScafM SNP 0002.scaffold00003 1054454 1 T G scaffold10485 ScafM INDEL 0002.scaffold00003 1054464 39 CACTTAGTAATAATAAAAGTATTTATAATAACTAAAGGC ....................................... scaffold10485 ReadM SNP 0002.scaffold00003 1054728 1 T G - ReadM SNP 0002.scaffold00003 1055068 1 T C - ReadM SNP 0002.scaffold00003 1055149 1 A G - ReadM SNP 0002.scaffold00003 1055226 1 G C - ReadM SNP 0002.scaffold00003 1055242 1 C A - ReadM SNP 0002.scaffold00003 1055461 1 A G - ReadM SNP 0002.scaffold00003 1055484 1 T A - ReadM SNP 0002.scaffold00003 1055620 1 T C - ScafM SNP 0002.scaffold00003 1055716 1 A G scaffold10485 ScafM SNP 0002.scaffold00003 1055730 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1055759 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1055768 1 C G scaffold10485 ScafM SNP 0002.scaffold00003 1055786 1 C T scaffold10485 ScafM SNP 0002.scaffold00003 1055818 1 T A scaffold10485 ScafM SNP 0002.scaffold00003 1055831 1 T C scaffold10485 ScafM INDEL 0002.scaffold00003 1055858 1 . T scaffold10485 ScafM SNP 0002.scaffold00003 1056006 1 T C scaffold2252 ScafM SNP 0002.scaffold00003 1056044 1 G A scaffold2252 ScafM SNP 0002.scaffold00003 1056051 1 C A scaffold2252 ScafM SNP 0002.scaffold00003 1056059 1 T A scaffold2252 ScafM SNP 0002.scaffold00003 1056064 1 T A scaffold2252 ScafM INDEL 0002.scaffold00003 1056070 1 G . scaffold2252 ScafM INDEL 0002.scaffold00003 1056084 2 TA .G scaffold2252 ScafM SNP 0002.scaffold00003 1056109 1 T G scaffold2252 ScafM SNP 0002.scaffold00003 1056124 1 A G scaffold2252 ScafM INDEL 0002.scaffold00003 1056128 1 A . scaffold2252 ScafM SNP 0002.scaffold00003 1056130 1 A G scaffold2252 ScafM SNP 0002.scaffold00003 1056135 1 A T scaffold2252 ScafM SNP 0002.scaffold00003 1056140 1 G A scaffold2252 ScafM SNP 0002.scaffold00003 1058623 1 T A scaffold1077 ScafM SNP 0002.scaffold00003 1058635 1 A G scaffold1077 ScafM SNP 0002.scaffold00003 1058648 1 C A scaffold1077 ScafM SNP 0002.scaffold00003 1058662 1 G C scaffold1077 ScafM SNP 0002.scaffold00003 1058677 2 CC AT scaffold1077 ScafM SNP 0002.scaffold00003 1058686 1 A C scaffold1077 ScafM SNP 0002.scaffold00003 1058867 1 T A scaffold1077 ScafM SNP 0002.scaffold00003 1058870 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1058890 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1058924 1 G A scaffold1077 ScafM SNP 0002.scaffold00003 1058931 1 C G scaffold1077 ScafM INDEL 0002.scaffold00003 1058939 3 ATA ... scaffold1077 ScafM SNP 0002.scaffold00003 1058961 1 A G scaffold1077 ScafM INDEL 0002.scaffold00003 1059009 2 .C GA scaffold1077 ScafM INDEL 0002.scaffold00003 1059048 4 .... TTAA scaffold1077 ScafM SNP 0002.scaffold00003 1059062 1 A G scaffold1077 ScafM INDEL 0002.scaffold00003 1059084 1 . C scaffold1077 ScafM SNP 0002.scaffold00003 1059086 2 GT TA scaffold1077 ScafM SNP 0002.scaffold00003 1059096 1 A G scaffold1077 ScafM SNP 0002.scaffold00003 1059112 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1059122 1 A C scaffold1077 ScafM SNP 0002.scaffold00003 1059130 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1059139 3 GCC AAT scaffold1077 ScafM SNP 0002.scaffold00003 1059143 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059152 1 G T scaffold1077 ScafM SNP 0002.scaffold00003 1059166 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059172 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1059179 1 A G scaffold1077 ScafM SNP 0002.scaffold00003 1059188 1 A G scaffold1077 ScafM SNP 0002.scaffold00003 1059207 1 A T scaffold1077 ScafM SNP 0002.scaffold00003 1059221 1 A G scaffold1077 ScafM SNP 0002.scaffold00003 1059226 1 T C scaffold1077 ScafM INDEL 0002.scaffold00003 1059250 5 ..... GTTCA scaffold1077 ScafM SNP 0002.scaffold00003 1059266 2 TG AA scaffold1077 ScafM SNP 0002.scaffold00003 1059281 1 G A scaffold1077 ScafM SNP 0002.scaffold00003 1059289 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059291 1 G A scaffold1077 ScafM SNP 0002.scaffold00003 1059322 2 TT CA scaffold1077 ScafM SNP 0002.scaffold00003 1059325 1 T A scaffold1077 ScafM SNP 0002.scaffold00003 1059330 1 C A scaffold1077 ScafM SNP 0002.scaffold00003 1059342 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059344 1 G A scaffold1077 ScafM SNP 0002.scaffold00003 1059351 1 A C scaffold1077 ScafM SNP 0002.scaffold00003 1059356 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059360 1 A G scaffold1077 ScafM INDEL 0002.scaffold00003 1059363 4 .... ATAT scaffold1077 ScafM SNP 0002.scaffold00003 1059386 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1059414 1 C T scaffold1077 ScafM SNP 0002.scaffold00003 1059430 2 TC CT scaffold1077 ScafM SNP 0002.scaffold00003 1059436 1 A C scaffold1077 ScafM SNP 0002.scaffold00003 1059453 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059460 2 CA TT scaffold1077 ScafM SNP 0002.scaffold00003 1059469 1 A T scaffold1077 ScafM SNP 0002.scaffold00003 1059497 2 TG CA scaffold1077 ScafM SNP 0002.scaffold00003 1059508 1 T C scaffold1077 ScafM SNP 0002.scaffold00003 1059518 1 G A scaffold1077 ScafM SNP 0002.scaffold00003 1059934 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1059967 1 T A scaffold12888 ScafM SNP 0002.scaffold00003 1059993 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1060025 1 G T scaffold12888 ScafM SNP 0002.scaffold00003 1060075 1 A G scaffold12888 ScafM SNP 0002.scaffold00003 1060079 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1060103 1 C G scaffold12888 ScafM INDEL 0002.scaffold00003 1060110 1 A . scaffold12888 ScafM SNP 0002.scaffold00003 1060139 1 T G scaffold12888 ScafM INDEL 0002.scaffold00003 1060151 2 GG .T scaffold12888 ScafM INDEL 0002.scaffold00003 1060156 2 .A TT scaffold12888 ScafM SNP 0002.scaffold00003 1060193 1 C T scaffold12888 ScafM INDEL 0002.scaffold00003 1060226 1 A . scaffold12888 ScafM SNP 0002.scaffold00003 1060228 1 C A scaffold12888 ScafM INDEL 0002.scaffold00003 1060231 1 C . scaffold12888 ScafM SNP 0002.scaffold00003 1060314 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1060354 1 C A scaffold12888 ScafM SNP 0002.scaffold00003 1060362 1 C T scaffold12888 ReadM SNP 0002.scaffold00003 1060561 1 C A - ReadM SNP 0002.scaffold00003 1060843 1 A C - ReadM SNP 0002.scaffold00003 1060846 1 A G - ReadM SNP 0002.scaffold00003 1061653 1 T C - ReadM SNP 0002.scaffold00003 1061700 1 A T - ReadM SNP 0002.scaffold00003 1061715 1 C T - ScafM SNP 0002.scaffold00003 1061759 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1061769 1 A G scaffold12888 ScafM INDEL 0002.scaffold00003 1061777 2 GG .A scaffold12888 ScafM SNP 0002.scaffold00003 1061806 1 T C scaffold12888 ScafM SNP 0002.scaffold00003 1061824 2 GG AA scaffold12888 ScafM SNP 0002.scaffold00003 1061839 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1061888 1 C T scaffold12888 ScafM SNP 0002.scaffold00003 1061900 1 T C scaffold12888 ScafM SNP 0002.scaffold00003 1061928 1 T C scaffold12888 ScafM INDEL 0002.scaffold00003 1061938 1 . A scaffold12888 ScafM INDEL 0002.scaffold00003 1061953 2 AA .. scaffold12888 ScafM SNP 0002.scaffold00003 1061976 1 T C scaffold12888 ScafM SNP 0002.scaffold00003 1062794 1 A C scaffold12888 ScafM SNP 0002.scaffold00003 1062863 1 T C scaffold12888 ScafM SNP 0002.scaffold00003 1062877 1 A C scaffold12888 ScafM SNP 0002.scaffold00003 1062940 1 A C scaffold12888 ScafM SNP 0002.scaffold00003 1063015 1 G A scaffold12888 ScafM SNP 0002.scaffold00003 1063049 1 C A scaffold12888 Both SNP 0002.scaffold00003 1063064 1 T A scaffold12888 Both SNP 0002.scaffold00003 1063079 1 G A scaffold12888 Both SNP 0002.scaffold00003 1063182 1 C T scaffold12888 Both SNP 0002.scaffold00003 1063208 1 C T scaffold12888 Both SNP 0002.scaffold00003 1063296 1 T C scaffold12888 Both SNP 0002.scaffold00003 1063299 1 A G scaffold12888 Both SNP 0002.scaffold00003 1063369 1 A G scaffold12888 Both INDEL 0002.scaffold00003 1063389 1 . A scaffold12888 ReadM SNP 0002.scaffold00003 1063547 1 G A - ReadM SNP 0002.scaffold00003 1063589 1 A G - ReadM SNP 0002.scaffold00003 1063632 1 A C - ReadM INDEL 0002.scaffold00003 1063703 1 . C - ScafM SNP 0002.scaffold00003 1065078 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065085 1 T G scaffold25948 ScafM SNP 0002.scaffold00003 1065089 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065166 1 T C scaffold25948 ScafM SNP 0002.scaffold00003 1065181 1 T C scaffold25948 ScafM SNP 0002.scaffold00003 1065183 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1065218 1 G A scaffold25948 ScafM INDEL 0002.scaffold00003 1065222 4 .GGC CTTT scaffold25948 ScafM SNP 0002.scaffold00003 1065246 1 T G scaffold25948 ScafM SNP 0002.scaffold00003 1065268 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065288 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065308 1 T C scaffold25948 ScafM SNP 0002.scaffold00003 1065316 1 A T scaffold25948 ScafM INDEL 0002.scaffold00003 1065345 1 A . scaffold25948 ScafM SNP 0002.scaffold00003 1065350 1 A C scaffold25948 ScafM SNP 0002.scaffold00003 1065362 1 G T scaffold25948 ScafM SNP 0002.scaffold00003 1065369 1 A G scaffold25948 ScafM INDEL 0002.scaffold00003 1065417 2 GA .T scaffold25948 ScafM SNP 0002.scaffold00003 1065434 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065442 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1065482 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1065521 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1065529 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065534 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065546 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065568 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065575 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065580 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065589 2 CT AC scaffold25948 ScafM SNP 0002.scaffold00003 1065592 2 GC AT scaffold25948 ScafM SNP 0002.scaffold00003 1065596 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1065610 2 TA CT scaffold25948 ScafM SNP 0002.scaffold00003 1065951 1 C T scaffold25948 ScafM SNP 0002.scaffold00003 1065955 1 T C scaffold25948 ScafM SNP 0002.scaffold00003 1065962 1 T A scaffold25948 ScafM INDEL 0002.scaffold00003 1065976 1 . A scaffold25948 ScafM SNP 0002.scaffold00003 1065983 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1065990 1 G T scaffold25948 ScafM SNP 0002.scaffold00003 1066019 1 T G scaffold25948 ScafM SNP 0002.scaffold00003 1066053 1 A T scaffold25948 ScafM SNP 0002.scaffold00003 1066062 1 G A scaffold25948 ScafM SNP 0002.scaffold00003 1066072 1 T A scaffold25948 ScafM SNP 0002.scaffold00003 1066109 1 G C scaffold25948 ScafM SNP 0002.scaffold00003 1066131 1 A C scaffold25948 ScafM SNP 0002.scaffold00003 1066145 1 G C scaffold25948 ScafM SNP 0002.scaffold00003 1066149 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1066198 1 G T scaffold25948 ScafM SNP 0002.scaffold00003 1066214 1 A G scaffold25948 ScafM SNP 0002.scaffold00003 1092836 1 T C scaffold3298 ScafM INDEL 0002.scaffold00003 1092863 1 . A scaffold3298 ScafM SNP 0002.scaffold00003 1092869 1 C T scaffold3298 ScafM SNP 0002.scaffold00003 1092872 1 A G scaffold3298 ScafM SNP 0002.scaffold00003 1092874 1 T G scaffold3298 ScafM SNP 0002.scaffold00003 1092877 1 T C scaffold3298 ScafM SNP 0002.scaffold00003 1092905 1 G A scaffold3298 ScafM SNP 0002.scaffold00003 1092935 1 G A scaffold3298 ScafM SNP 0002.scaffold00003 1092970 1 A T scaffold3298 ScafM SNP 0002.scaffold00003 1092972 2 AG TT scaffold3298 ScafM SNP 0002.scaffold00003 1092979 1 C T scaffold3298 ScafM SNP 0002.scaffold00003 1093013 2 GT AC scaffold3298 ScafM SNP 0002.scaffold00003 1093022 1 T G scaffold3298 ScafM SNP 0002.scaffold00003 1093026 1 C A scaffold3298 ScafM SNP 0002.scaffold00003 1093058 1 T C scaffold3298 ScafM SNP 0002.scaffold00003 1093060 1 C G scaffold3298 ScafM INDEL 0002.scaffold00003 1093070 1 A . scaffold3298 ScafM SNP 0002.scaffold00003 1093088 1 G C scaffold3298 ScafM INDEL 0002.scaffold00003 1093104 7 GGTCTTA ....... scaffold3298 ScafM SNP 0002.scaffold00003 1093115 1 T A scaffold3298 ScafM SNP 0002.scaffold00003 1093136 1 T A scaffold3298 ScafM SNP 0002.scaffold00003 1093147 1 C T scaffold3298 ScafM SNP 0002.scaffold00003 1093168 1 A T scaffold3298 ScafM SNP 0002.scaffold00003 1093197 1 C G scaffold3298 ScafM SNP 0002.scaffold00003 1093200 2 TT CC scaffold3298 ScafM INDEL 0002.scaffold00003 1093224 1 . T scaffold3298 ScafM SNP 0002.scaffold00003 1093279 1 C G scaffold3298 ScafM SNP 0002.scaffold00003 1093288 1 G T scaffold3298 ReadM SNP 0002.scaffold00003 1093611 1 T C - Both INDEL 0002.scaffold00003 1093726 1 A . scaffold13496 Both SNP 0002.scaffold00003 1093782 1 A G scaffold13496 Both SNP 0002.scaffold00003 1093821 1 G T scaffold13496 Both SNP 0002.scaffold00003 1093894 1 C T scaffold13496 ReadM SNP 0002.scaffold00003 1094009 1 A G - ReadM SNP 0002.scaffold00003 1094040 1 G C - ReadM SNP 0002.scaffold00003 1094127 1 G C - ScafM INDEL 0002.scaffold00003 1094174 1 A . scaffold13496 ScafM SNP 0002.scaffold00003 1094536 1 T G scaffold13496 ScafM SNP 0002.scaffold00003 1094597 1 A G scaffold13496 ScafM SNP 0002.scaffold00003 1094602 1 A C scaffold13496 ScafM SNP 0002.scaffold00003 1094629 1 A T scaffold13496 Both SNP 0002.scaffold00003 1094669 1 A G scaffold13496 Both SNP 0002.scaffold00003 1094700 1 T C scaffold13496 Both SNP 0002.scaffold00003 1094723 1 C T scaffold13496 ScafM INDEL 0002.scaffold00003 1094760 11 ........... AGAAGACTCTC scaffold13496 Both SNP 0002.scaffold00003 1094783 1 C G scaffold13496 Both SNP 0002.scaffold00003 1094824 1 A G scaffold13496 Both SNP 0002.scaffold00003 1094869 1 G C scaffold13496 ScafM SNP 0002.scaffold00003 1094904 1 G A scaffold13496 Both SNP 0002.scaffold00003 1094914 1 T A scaffold13496 Both SNP 0002.scaffold00003 1094940 1 T C scaffold13496 Both SNP 0002.scaffold00003 1094979 1 G A scaffold13496 Both SNP 0002.scaffold00003 1095124 1 T C scaffold13496 Both SNP 0002.scaffold00003 1095137 1 A G scaffold13496 ReadM SNP 0002.scaffold00003 1095184 1 A G - ReadM SNP 0002.scaffold00003 1095204 1 A G - ReadM SNP 0002.scaffold00003 1095207 1 A G - ReadM SNP 0002.scaffold00003 1095282 1 A G - ReadM SNP 0002.scaffold00003 1095321 1 A G - ReadM SNP 0002.scaffold00003 1095388 1 T C - ReadM SNP 0002.scaffold00003 1095458 1 T C - ReadM SNP 0002.scaffold00003 1095577 1 C A - ReadM SNP 0002.scaffold00003 1095587 1 T C - ReadM SNP 0002.scaffold00003 1095621 1 G T - ReadM SNP 0002.scaffold00003 1095948 1 T C - ReadM SNP 0002.scaffold00003 1095954 1 G T - ReadM SNP 0002.scaffold00003 1095964 1 A G - ReadM SNP 0002.scaffold00003 1096026 1 C A - ReadM SNP 0002.scaffold00003 1096127 1 C T - ReadM SNP 0002.scaffold00003 1096130 1 A G - Both SNP 0002.scaffold00003 1096228 1 A G scaffold13496 Both SNP 0002.scaffold00003 1096256 1 A T scaffold13496 Both SNP 0002.scaffold00003 1096285 1 A G scaffold13496 ReadM SNP 0002.scaffold00003 1096349 1 T C - ReadM SNP 0002.scaffold00003 1096654 1 T C - ReadM SNP 0002.scaffold00003 1096720 1 C T - ReadM SNP 0002.scaffold00003 1096749 1 G A - ReadM SNP 0002.scaffold00003 1096784 1 C G - ReadM SNP 0002.scaffold00003 1096791 1 A G - ReadM INDEL 0002.scaffold00003 1096812 1 C . - ReadM SNP 0002.scaffold00003 1096919 1 G C - ReadM SNP 0002.scaffold00003 1096941 1 A G - ReadM SNP 0002.scaffold00003 1097031 1 C T - ReadM INDEL 0002.scaffold00003 1097059 1 A . - ReadM SNP 0002.scaffold00003 1097134 1 G A - ReadM SNP 0002.scaffold00003 1097246 1 T C - ReadM SNP 0002.scaffold00003 1097370 1 G A - ReadM SNP 0002.scaffold00003 1097396 1 A G - ReadM SNP 0002.scaffold00003 1097438 1 A G - ReadM SNP 0002.scaffold00003 1097516 1 G T - Both SNP 0002.scaffold00003 1097889 1 A T scaffold13496 ScafM SNP 0002.scaffold00003 1097907 1 A G scaffold13496 ScafM SNP 0002.scaffold00003 1097924 2 GC AT scaffold13496 ScafM SNP 0002.scaffold00003 1097934 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1097942 1 C T scaffold13496 ScafM INDEL 0002.scaffold00003 1097945 6 ...... CGAGTG scaffold13496 ScafM INDEL 0002.scaffold00003 1097975 3 ... AGT scaffold13496 ScafM INDEL 0002.scaffold00003 1097980 17 ................. ATAAATTTATAACTCTA scaffold13496 Both INDEL 0002.scaffold00003 1098018 1 . C scaffold13496 ScafM SNP 0002.scaffold00003 1098021 1 G T scaffold13496 Both SNP 0002.scaffold00003 1098076 1 A C scaffold13496 ScafM INDEL 0002.scaffold00003 1098096 4 .... ACTT scaffold13496 Both SNP 0002.scaffold00003 1098239 1 T C scaffold13496 Both SNP 0002.scaffold00003 1098331 1 C A scaffold13496 Both SNP 0002.scaffold00003 1098409 1 C T scaffold13496 Both SNP 0002.scaffold00003 1098440 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1098468 1 T A scaffold13496 ScafM SNP 0002.scaffold00003 1098472 1 C A scaffold13496 ScafM SNP 0002.scaffold00003 1098503 1 T A scaffold13496 ScafM INDEL 0002.scaffold00003 1098516 1 . G scaffold13496 ScafM SNP 0002.scaffold00003 1098533 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1098548 1 A C scaffold13496 ScafM SNP 0002.scaffold00003 1098591 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1098594 1 C G scaffold13496 ScafM SNP 0002.scaffold00003 1098599 1 G A scaffold13496 Both SNP 0002.scaffold00003 1098651 1 A G scaffold13496 Both INDEL 0002.scaffold00003 1098814 1 T . scaffold13496 Both SNP 0002.scaffold00003 1098826 1 A G scaffold13496 Both INDEL 0002.scaffold00003 1098876 1 . G scaffold13496 Both SNP 0002.scaffold00003 1098887 1 A T scaffold13496 Both SNP 0002.scaffold00003 1098995 1 C A scaffold13496 Both SNP 0002.scaffold00003 1099015 1 G C scaffold13496 Both SNP 0002.scaffold00003 1099299 1 T C scaffold13496 Both SNP 0002.scaffold00003 1099507 1 A T scaffold13496 Both INDEL 0002.scaffold00003 1099679 1 . T scaffold13496 Both SNP 0002.scaffold00003 1099760 1 G T scaffold13496 Both SNP 0002.scaffold00003 1099834 1 A G scaffold13496 Both SNP 0002.scaffold00003 1099873 1 A C scaffold13496 Both SNP 0002.scaffold00003 1099884 1 C G scaffold13496 Both SNP 0002.scaffold00003 1100007 1 A T scaffold13496 Both SNP 0002.scaffold00003 1100016 1 T A scaffold13496 Both SNP 0002.scaffold00003 1100197 1 C T scaffold13496 Both SNP 0002.scaffold00003 1100306 1 T A scaffold13496 ScafM INDEL 0002.scaffold00003 1100340 4 CTTC .... scaffold13496 Both SNP 0002.scaffold00003 1100394 1 G C scaffold13496 ScafM SNP 0002.scaffold00003 1100398 1 T A scaffold13496 Both SNP 0002.scaffold00003 1100534 1 G A scaffold13496 Both SNP 0002.scaffold00003 1100552 1 T C scaffold13496 Both SNP 0002.scaffold00003 1100634 1 T A scaffold13496 Both INDEL 0002.scaffold00003 1100716 3 GAC ... scaffold13496 Both SNP 0002.scaffold00003 1100830 1 T G scaffold13496 ReadM SNP 0002.scaffold00003 1100875 1 T G - Both SNP 0002.scaffold00003 1100993 1 A T scaffold13496 Both SNP 0002.scaffold00003 1101175 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1101198 1 G A scaffold13496 Both SNP 0002.scaffold00003 1101218 1 T C scaffold13496 Both SNP 0002.scaffold00003 1101447 1 C A scaffold13496 Both SNP 0002.scaffold00003 1101919 1 A G scaffold13496 Both SNP 0002.scaffold00003 1102032 1 C T scaffold13496 Both SNP 0002.scaffold00003 1102105 1 G C scaffold13496 ScafM SNP 0002.scaffold00003 1102145 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1102148 2 AT TA scaffold13496 ReadM SNP 0002.scaffold00003 1102347 1 A G - ReadM SNP 0002.scaffold00003 1102391 1 C G - ReadM SNP 0002.scaffold00003 1102424 1 G A - ReadM SNP 0002.scaffold00003 1102545 1 T A - Both SNP 0002.scaffold00003 1102651 1 T C scaffold13496 Both SNP 0002.scaffold00003 1102867 1 A G scaffold13496 Both SNP 0002.scaffold00003 1102873 1 G T scaffold13496 Both SNP 0002.scaffold00003 1102967 1 T A scaffold13496 ScafM INDEL 0002.scaffold00003 1103059 1 T . scaffold13496 ScafM INDEL 0002.scaffold00003 1103062 2 GA .. scaffold13496 ReadM SNP 0002.scaffold00003 1103143 1 C T - ReadM SNP 0002.scaffold00003 1103194 1 T A - ReadM SNP 0002.scaffold00003 1103256 1 A G - ReadM SNP 0002.scaffold00003 1103288 1 A G - ReadM INDEL 0002.scaffold00003 1103312 1 C . - Both SNP 0002.scaffold00003 1103329 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1103372 1 A G scaffold13496 ScafM INDEL 0002.scaffold00003 1103397 2 AA .. scaffold13496 ScafM SNP 0002.scaffold00003 1103400 1 A C scaffold13496 Both SNP 0002.scaffold00003 1103423 1 A G scaffold13496 Both INDEL 0002.scaffold00003 1104019 2 TA .. scaffold13496 Both SNP 0002.scaffold00003 1104424 1 T C scaffold13496 Both SNP 0002.scaffold00003 1104507 1 G C scaffold13496 Both SNP 0002.scaffold00003 1104760 1 C T scaffold13496 Both SNP 0002.scaffold00003 1104972 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1105093 3 GTT AAG scaffold13496 Both SNP 0002.scaffold00003 1105209 1 G C scaffold13496 Both SNP 0002.scaffold00003 1105269 1 A G scaffold13496 Both SNP 0002.scaffold00003 1105327 1 G A scaffold13496 ReadM SNP 0002.scaffold00003 1105415 1 G A - ReadM SNP 0002.scaffold00003 1105423 1 T A - Both SNP 0002.scaffold00003 1105490 1 A G scaffold13496 ReadM SNP 0002.scaffold00003 1105526 1 G T - ReadM SNP 0002.scaffold00003 1105545 1 A G - ReadM SNP 0002.scaffold00003 1105638 1 T C - ReadM SNP 0002.scaffold00003 1105661 1 T C - Both SNP 0002.scaffold00003 1105834 1 C G scaffold13496 Both SNP 0002.scaffold00003 1105854 1 A G scaffold13496 Both SNP 0002.scaffold00003 1105870 1 T C scaffold13496 Both SNP 0002.scaffold00003 1105965 1 T C scaffold13496 Both SNP 0002.scaffold00003 1105973 1 C T scaffold13496 Both SNP 0002.scaffold00003 1106020 1 T C scaffold13496 Both SNP 0002.scaffold00003 1106065 1 T C scaffold13496 ScafM INDEL 0002.scaffold00003 1106105 3 ... AAG scaffold13496 ScafM SNP 0002.scaffold00003 1106120 1 C T scaffold13496 ScafM INDEL 0002.scaffold00003 1106162 38 ...................................... TTGGAAAACCAGATGGTTGGGGTGTTTTTATAGTGAAT scaffold13496 ScafM INDEL 0002.scaffold00003 1106163 10 .......... ATGATAGTGG scaffold13496 ScafM INDEL 0002.scaffold00003 1106166 8 ........ TTTCGTGC scaffold13496 Both SNP 0002.scaffold00003 1106181 1 C T scaffold13496 Both SNP 0002.scaffold00003 1106291 1 T C scaffold13496 Both SNP 0002.scaffold00003 1106429 1 T C scaffold13496 Both SNP 0002.scaffold00003 1106449 1 A G scaffold13496 Both SNP 0002.scaffold00003 1106482 1 T A scaffold13496 ReadM SNP 0002.scaffold00003 1106577 1 C A - ReadM INDEL 0002.scaffold00003 1106643 1 . A - ReadM SNP 0002.scaffold00003 1106826 1 C T - ReadM SNP 0002.scaffold00003 1106858 1 G C - ReadM SNP 0002.scaffold00003 1106903 1 A T - ReadM SNP 0002.scaffold00003 1106988 1 T G - ReadM SNP 0002.scaffold00003 1107091 1 T C - ReadM SNP 0002.scaffold00003 1107119 1 C G - ReadM SNP 0002.scaffold00003 1107163 1 T C - ReadM SNP 0002.scaffold00003 1107181 1 G A - ReadM SNP 0002.scaffold00003 1107210 1 C T - ReadM SNP 0002.scaffold00003 1107280 1 C A - ReadM SNP 0002.scaffold00003 1107309 1 G A - ReadM SNP 0002.scaffold00003 1107415 1 C T - ReadM SNP 0002.scaffold00003 1107447 1 G A - ReadM SNP 0002.scaffold00003 1107457 1 T C - Both SNP 0002.scaffold00003 1107548 1 T C scaffold13496 Both SNP 0002.scaffold00003 1107584 1 C T scaffold13496 Both SNP 0002.scaffold00003 1107587 1 T G scaffold13496 ScafM SNP 0002.scaffold00003 1107613 1 A G scaffold13496 ScafM SNP 0002.scaffold00003 1107615 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1107622 1 T A scaffold13496 ScafM SNP 0002.scaffold00003 1107650 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1107654 1 A T scaffold13496 ReadM SNP 0002.scaffold00003 1107670 1 A C - ReadM SNP 0002.scaffold00003 1107726 1 T C - ReadM SNP 0002.scaffold00003 1107765 1 G A - Both SNP 0002.scaffold00003 1107829 1 G C scaffold13496 Both SNP 0002.scaffold00003 1107832 1 G A scaffold13496 Both SNP 0002.scaffold00003 1107889 1 C T scaffold13496 ReadM SNP 0002.scaffold00003 1107945 1 T C - ReadM SNP 0002.scaffold00003 1107948 1 A T - Both SNP 0002.scaffold00003 1108069 1 A T scaffold13496 Both SNP 0002.scaffold00003 1108154 1 A T scaffold13496 Both SNP 0002.scaffold00003 1108198 1 A T scaffold13496 Both SNP 0002.scaffold00003 1108208 1 C T scaffold13496 Both SNP 0002.scaffold00003 1108230 1 T C scaffold13496 Both SNP 0002.scaffold00003 1108268 1 T G scaffold13496 Both SNP 0002.scaffold00003 1108354 1 T C scaffold13496 Both SNP 0002.scaffold00003 1108378 2 TG CA scaffold13496 ReadM SNP 0002.scaffold00003 1108483 1 G T - ReadM SNP 0002.scaffold00003 1108547 1 T C - ReadM SNP 0002.scaffold00003 1108555 1 T A - ReadM SNP 0002.scaffold00003 1108569 1 G C - ReadM SNP 0002.scaffold00003 1108602 1 G T - ReadM SNP 0002.scaffold00003 1108660 1 A G - ReadM SNP 0002.scaffold00003 1108693 1 A G - ReadM SNP 0002.scaffold00003 1108825 1 T C - ReadM SNP 0002.scaffold00003 1108862 1 T A - ReadM SNP 0002.scaffold00003 1108900 1 T C - ReadM INDEL 0002.scaffold00003 1109095 1 T . - ReadM SNP 0002.scaffold00003 1109292 1 C T - ReadM SNP 0002.scaffold00003 1109307 1 G A - ReadM SNP 0002.scaffold00003 1109337 1 T C - ScafM SNP 0002.scaffold00003 1109421 2 AA TT scaffold13496 Both SNP 0002.scaffold00003 1109485 1 C A scaffold13496 Both SNP 0002.scaffold00003 1109745 1 C T scaffold13496 ReadM SNP 0002.scaffold00003 1109876 1 C T - ReadM SNP 0002.scaffold00003 1110048 1 C T - Both SNP 0002.scaffold00003 1110149 1 C G scaffold13496 Both SNP 0002.scaffold00003 1110467 1 T C scaffold13496 Both INDEL 0002.scaffold00003 1110506 1 T . scaffold13496 Both SNP 0002.scaffold00003 1110602 1 A G scaffold13496 Both SNP 0002.scaffold00003 1110629 1 G C scaffold13496 Both SNP 0002.scaffold00003 1110733 1 T C scaffold13496 Both INDEL 0002.scaffold00003 1110748 1 . A scaffold13496 ScafM SNP 0002.scaffold00003 1110774 1 C T scaffold13496 ScafM INDEL 0002.scaffold00003 1110787 3 ATA ... scaffold13496 ScafM SNP 0002.scaffold00003 1110794 1 G A scaffold13496 ScafM INDEL 0002.scaffold00003 1110817 11 CAATTTTCTGA ........... scaffold13496 ScafM SNP 0002.scaffold00003 1110833 1 A T scaffold13496 ScafM INDEL 0002.scaffold00003 1110867 7 ....... AATTTCA scaffold13496 Both SNP 0002.scaffold00003 1110897 1 G A scaffold13496 Both SNP 0002.scaffold00003 1110967 1 T G scaffold13496 Both SNP 0002.scaffold00003 1110989 1 G A scaffold13496 Both SNP 0002.scaffold00003 1111068 1 T A scaffold13496 Both SNP 0002.scaffold00003 1111072 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1111278 1 T C scaffold13496 ScafM INDEL 0002.scaffold00003 1111280 1 . T scaffold13496 ScafM SNP 0002.scaffold00003 1111323 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1111328 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1111356 1 C A scaffold13496 ScafM SNP 0002.scaffold00003 1111393 1 T A scaffold13496 ScafM SNP 0002.scaffold00003 1111397 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1111410 1 C A scaffold13496 ScafM SNP 0002.scaffold00003 1111425 2 CT TC scaffold13496 ScafM INDEL 0002.scaffold00003 1111446 5 TCTTG ..... scaffold13496 ScafM SNP 0002.scaffold00003 1111488 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111502 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111544 1 A G scaffold13496 ScafM INDEL 0002.scaffold00003 1111554 5 TCTAT ..... scaffold13496 ScafM INDEL 0002.scaffold00003 1111562 3 TCC ... scaffold13496 ScafM INDEL 0002.scaffold00003 1111566 1 C . scaffold13496 ScafM INDEL 0002.scaffold00003 1111570 10 CCTTTGATTG .......... scaffold13496 ScafM SNP 0002.scaffold00003 1111610 1 A G scaffold13496 ScafM SNP 0002.scaffold00003 1111627 2 TT CC scaffold13496 ScafM SNP 0002.scaffold00003 1111633 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111637 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111645 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1111660 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111686 1 C A scaffold13496 ScafM SNP 0002.scaffold00003 1111689 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111710 1 C T scaffold13496 ScafM INDEL 0002.scaffold00003 1111728 3 ... AAT scaffold13496 ScafM SNP 0002.scaffold00003 1111754 1 T G scaffold13496 ScafM SNP 0002.scaffold00003 1111776 1 A C scaffold13496 ScafM SNP 0002.scaffold00003 1111789 1 T C scaffold13496 ScafM INDEL 0002.scaffold00003 1111801 1 . G scaffold13496 ScafM SNP 0002.scaffold00003 1111835 1 A C scaffold13496 ScafM SNP 0002.scaffold00003 1111837 1 C A scaffold13496 ScafM SNP 0002.scaffold00003 1111871 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1111877 1 C T scaffold13496 ScafM SNP 0002.scaffold00003 1111905 1 A C scaffold13496 ScafM INDEL 0002.scaffold00003 1111913 1 . A scaffold13496 ScafM SNP 0002.scaffold00003 1111918 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1111930 1 A G scaffold13496 ScafM SNP 0002.scaffold00003 1111947 1 A T scaffold13496 ScafM SNP 0002.scaffold00003 1111971 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1111981 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1111991 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1112415 1 G A scaffold13496 ScafM SNP 0002.scaffold00003 1112423 1 T C scaffold13496 ScafM SNP 0002.scaffold00003 1112431 1 T A scaffold13496 ScafM SNP 0002.scaffold00003 1112470 1 A G scaffold13496 ReadM SNP 0002.scaffold00003 1114001 1 T C - ScafM SNP 0002.scaffold00003 1114074 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114106 1 T G scaffold24656 ScafM SNP 0002.scaffold00003 1114116 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114118 2 GG AA scaffold24656 ScafM SNP 0002.scaffold00003 1114129 2 AG GA scaffold24656 ScafM SNP 0002.scaffold00003 1114137 1 C A scaffold24656 ScafM SNP 0002.scaffold00003 1114155 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114157 1 G A scaffold24656 ScafM INDEL 0002.scaffold00003 1114161 1 C . scaffold24656 ScafM SNP 0002.scaffold00003 1114179 1 C T scaffold24656 ScafM SNP 0002.scaffold00003 1114191 1 A C scaffold24656 ScafM SNP 0002.scaffold00003 1114231 2 CA AG scaffold24656 ScafM SNP 0002.scaffold00003 1114246 1 C T scaffold24656 ScafM SNP 0002.scaffold00003 1114255 1 G T scaffold24656 ScafM SNP 0002.scaffold00003 1114305 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114316 1 T G scaffold24656 ScafM SNP 0002.scaffold00003 1114327 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1114343 1 A T scaffold24656 Both SNP 0002.scaffold00003 1114431 1 T C scaffold24656 Both SNP 0002.scaffold00003 1114435 1 A G scaffold24656 ReadM INDEL 0002.scaffold00003 1114490 1 A . - ReadM SNP 0002.scaffold00003 1114525 1 A G - ReadM SNP 0002.scaffold00003 1114542 1 G A - ScafM SNP 0002.scaffold00003 1114739 1 A T scaffold24656 ScafM SNP 0002.scaffold00003 1114767 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114780 1 C T scaffold24656 ScafM SNP 0002.scaffold00003 1114793 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1114802 1 A G scaffold24656 Both SNP 0002.scaffold00003 1114852 1 C T scaffold24656 ScafM INDEL 0002.scaffold00003 1114901 1 G . scaffold24656 ScafM SNP 0002.scaffold00003 1114922 1 G C scaffold24656 ScafM SNP 0002.scaffold00003 1114924 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1114951 2 AC GT scaffold24656 ScafM SNP 0002.scaffold00003 1114997 1 A C scaffold24656 ScafM SNP 0002.scaffold00003 1115026 1 C G scaffold24656 ScafM INDEL 0002.scaffold00003 1115042 8 ........ ACGAACTC scaffold24656 ScafM INDEL 0002.scaffold00003 1115045 2 .. CA scaffold24656 ScafM INDEL 0002.scaffold00003 1115048 2 .. CC scaffold24656 ScafM INDEL 0002.scaffold00003 1115049 2 .. TG scaffold24656 ScafM SNP 0002.scaffold00003 1115063 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115069 1 C T scaffold24656 ScafM SNP 0002.scaffold00003 1115078 1 C T scaffold24656 ScafM INDEL 0002.scaffold00003 1115135 27 CTCGATGACCACCATAACAGGCAGTAG ........................... scaffold24656 ScafM SNP 0002.scaffold00003 1115175 1 T G scaffold24656 ScafM SNP 0002.scaffold00003 1115203 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1115207 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115209 1 C T scaffold24656 ScafM SNP 0002.scaffold00003 1115212 1 A C scaffold24656 ScafM SNP 0002.scaffold00003 1115217 1 A G scaffold24656 ScafM SNP 0002.scaffold00003 1115222 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1115224 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1115235 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115239 1 T A scaffold24656 ScafM SNP 0002.scaffold00003 1115260 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115270 1 A G scaffold24656 ScafM SNP 0002.scaffold00003 1115278 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115314 1 A G scaffold24656 ScafM SNP 0002.scaffold00003 1115326 1 G A scaffold24656 ScafM SNP 0002.scaffold00003 1115345 1 C A scaffold24656 ScafM SNP 0002.scaffold00003 1115355 1 T C scaffold24656 ScafM SNP 0002.scaffold00003 1115359 1 A T scaffold24656 ScafM SNP 0002.scaffold00003 1115369 1 A G scaffold24656 ReadM SNP 0002.scaffold00003 1116219 1 A C - ReadM SNP 0002.scaffold00003 1116224 1 T G - ReadM INDEL 0002.scaffold00003 1116251 1 T . - ScafM SNP 0002.scaffold00003 1134237 1 A C scaffold1948 ScafM SNP 0002.scaffold00003 1134242 1 T C scaffold1948 ScafM SNP 0002.scaffold00003 1134247 1 A C scaffold1948 ScafM SNP 0002.scaffold00003 1134256 1 A G scaffold1948 ScafM INDEL 0002.scaffold00003 1134265 1 C . scaffold1948 ScafM SNP 0002.scaffold00003 1134276 1 C T scaffold1948 ScafM SNP 0002.scaffold00003 1134290 1 T A scaffold1948 ScafM INDEL 0002.scaffold00003 1134309 2 CG .T scaffold1948 ScafM SNP 0002.scaffold00003 1134317 2 GC AG scaffold1948 ScafM SNP 0002.scaffold00003 1134341 2 CT TC scaffold1948 ScafM INDEL 0002.scaffold00003 1134345 1 T . scaffold1948 ScafM SNP 0002.scaffold00003 1134367 1 A C scaffold1948 ScafM INDEL 0002.scaffold00003 1134374 6 GTCTTG ...... scaffold1948 ScafM SNP 0002.scaffold00003 1134382 1 C A scaffold1948 ScafM SNP 0002.scaffold00003 1134435 1 C T scaffold1948 ScafM SNP 0002.scaffold00003 1134453 1 A T scaffold1948 ScafM SNP 0002.scaffold00003 1134464 1 T A scaffold1948 ScafM SNP 0002.scaffold00003 1134466 1 A T scaffold1948 ScafM SNP 0002.scaffold00003 1134512 1 C T scaffold1948 ScafM SNP 0002.scaffold00003 1134516 1 G A scaffold1948 ScafM SNP 0002.scaffold00003 1134524 1 A G scaffold1948 ScafM SNP 0002.scaffold00003 1134530 1 G A scaffold1948 ScafM INDEL 0002.scaffold00003 1134532 2 TT .. scaffold1948 ScafM SNP 0002.scaffold00003 1134537 1 C A scaffold1948 ScafM SNP 0002.scaffold00003 1134576 2 TA AT scaffold1948 ScafM SNP 0002.scaffold00003 1134582 1 A T scaffold1948 ScafM SNP 0002.scaffold00003 1134604 1 T G scaffold1948 ScafM SNP 0002.scaffold00003 1134609 2 CA TT scaffold1948 ScafM SNP 0002.scaffold00003 1134612 1 T C scaffold1948 ScafM INDEL 0002.scaffold00003 1134618 6 TATATA ...... scaffold1948 ScafM INDEL 0002.scaffold00003 1134629 7 CTTTACA ......G scaffold1948 ScafM SNP 0002.scaffold00003 1134659 1 C T scaffold1948 ScafM SNP 0002.scaffold00003 1134690 1 C A scaffold1948 ScafM SNP 0002.scaffold00003 1134695 1 A T scaffold1948 ScafM SNP 0002.scaffold00003 1134708 1 G A scaffold1948 ScafM SNP 0002.scaffold00003 1134732 1 G C scaffold1948 ScafM INDEL 0002.scaffold00003 1134763 13 ............. TATATATGAAAAA scaffold1948 ScafM INDEL 0002.scaffold00003 1134778 1 . C scaffold1948 ScafM INDEL 0002.scaffold00003 1134785 1 A . scaffold1948 ScafM SNP 0002.scaffold00003 1134812 1 T C scaffold1948 ReadM SNP 0002.scaffold00003 1154500 1 A G - ScafM SNP 0002.scaffold00003 1155330 1 C A scaffold133 ScafM SNP 0002.scaffold00003 1155333 1 A T scaffold133 ScafM SNP 0002.scaffold00003 1155396 2 GT TC scaffold133 ScafM SNP 0002.scaffold00003 1155431 1 T G scaffold133 ScafM INDEL 0002.scaffold00003 1155443 4 TATT .... scaffold133 ScafM SNP 0002.scaffold00003 1155467 1 G C scaffold133 ScafM SNP 0002.scaffold00003 1155482 1 A T scaffold133 ScafM INDEL 0002.scaffold00003 1155510 1 . A scaffold133 ScafM SNP 0002.scaffold00003 1155553 1 T C scaffold133 ScafM INDEL 0002.scaffold00003 1155561 2 AT .. scaffold133 ScafM SNP 0002.scaffold00003 1155568 1 T C scaffold133 ScafM SNP 0002.scaffold00003 1157306 1 C T scaffold133 ScafM SNP 0002.scaffold00003 1157370 1 T A scaffold133 ScafM INDEL 0002.scaffold00003 1157382 1 . A scaffold133 ScafM INDEL 0002.scaffold00003 1157422 1 T . scaffold133 ScafM SNP 0002.scaffold00003 1157441 1 A T scaffold133 ScafM SNP 0002.scaffold00003 1157464 1 A G scaffold133 ScafM SNP 0002.scaffold00003 1157474 1 A G scaffold133 ScafM SNP 0002.scaffold00003 1157480 1 A G scaffold133 ScafM SNP 0002.scaffold00003 1157488 1 G A scaffold133 ScafM SNP 0002.scaffold00003 1157518 1 T C scaffold133 ScafM SNP 0002.scaffold00003 1157520 1 G A scaffold133 ScafM INDEL 0002.scaffold00003 1157528 1 A . scaffold133 ScafM INDEL 0002.scaffold00003 1157549 1 T . scaffold133 ScafM SNP 0002.scaffold00003 1157555 1 T G scaffold133 ScafM SNP 0002.scaffold00003 1157584 1 T G scaffold133 ScafM SNP 0002.scaffold00003 1157635 1 C A scaffold133 ScafM SNP 0002.scaffold00003 1157672 1 A T scaffold133 ScafM SNP 0002.scaffold00003 1157690 1 A T scaffold133 ScafM SNP 0002.scaffold00003 1157723 2 TG CA scaffold133 ScafM SNP 0002.scaffold00003 1157752 1 C T scaffold133 ScafM SNP 0002.scaffold00003 1157769 1 C T scaffold133 ScafM SNP 0002.scaffold00003 1157774 1 G A scaffold133 ReadM SNP 0002.scaffold00003 1158430 1 A G - ScafM SNP 0002.scaffold00003 1168720 1 A C scaffold133 ScafM INDEL 0002.scaffold00003 1168726 2 AA .. scaffold133 ScafM SNP 0002.scaffold00003 1169762 1 G A scaffold21920 ReadM SNP 0002.scaffold00003 1170515 1 T C - ReadM SNP 0002.scaffold00003 1170552 1 T G - ScafM INDEL 0002.scaffold00003 1171338 2 CA .T scaffold21920 ScafM SNP 0002.scaffold00003 1175406 1 C A scaffold7085 ScafM INDEL 0002.scaffold00003 1175410 1 . A scaffold7085 ScafM INDEL 0002.scaffold00003 1175419 1 A . scaffold7085 ScafM SNP 0002.scaffold00003 1175421 2 AC GT scaffold7085 ScafM SNP 0002.scaffold00003 1175427 1 A T scaffold7085 ScafM SNP 0002.scaffold00003 1175461 1 A C scaffold7085 ScafM SNP 0002.scaffold00003 1176193 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1176196 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1176200 1 T A scaffold21920 ScafM INDEL 0002.scaffold00003 1176257 1 T . scaffold21920 ScafM SNP 0002.scaffold00003 1176259 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1176279 1 A T scaffold21920 ScafM SNP 0002.scaffold00003 1176284 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1176289 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176307 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176314 2 CT AA scaffold21920 ScafM SNP 0002.scaffold00003 1176321 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176323 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176333 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176335 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176354 1 C G scaffold21920 ScafM SNP 0002.scaffold00003 1176357 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1176379 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176388 2 AG GA scaffold21920 ScafM SNP 0002.scaffold00003 1176404 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1176414 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176425 1 T A scaffold21920 ScafM INDEL 0002.scaffold00003 1176438 1 . G scaffold21920 ScafM SNP 0002.scaffold00003 1176449 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176463 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176501 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176506 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176508 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1176515 1 C G scaffold21920 ScafM INDEL 0002.scaffold00003 1176524 2 AG .. scaffold21920 ScafM INDEL 0002.scaffold00003 1176531 1 . G scaffold21920 ScafM SNP 0002.scaffold00003 1176558 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1176679 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1176690 1 A C scaffold21920 ScafM SNP 0002.scaffold00003 1176709 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1176728 1 T C scaffold21920 ScafM INDEL 0002.scaffold00003 1176806 6 ...... AGTACA scaffold21920 ScafM SNP 0002.scaffold00003 1176818 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1176837 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1176878 1 G C scaffold21920 ScafM INDEL 0002.scaffold00003 1176884 7 AAAAAAA ......G scaffold21920 ScafM SNP 0002.scaffold00003 1176905 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1176928 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1177000 1 T C scaffold21920 ScafM INDEL 0002.scaffold00003 1177016 6 ...... CAAAAT scaffold21920 ScafM INDEL 0002.scaffold00003 1177018 2 .. CG scaffold21920 ScafM SNP 0002.scaffold00003 1177033 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1177037 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1177039 1 T C scaffold21920 ScafM INDEL 0002.scaffold00003 1177082 2 TT .. scaffold21920 ScafM INDEL 0002.scaffold00003 1177092 1 . A scaffold21920 Both SNP 0002.scaffold00003 1177192 1 G T scaffold21920 Both SNP 0002.scaffold00003 1177273 1 G C scaffold21920 ScafM SNP 0002.scaffold00003 1177300 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177306 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1177312 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1177464 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177484 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1177494 1 A G scaffold21920 Both SNP 0002.scaffold00003 1177545 1 C T scaffold21920 Both SNP 0002.scaffold00003 1177592 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177618 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177640 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1177654 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177663 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1177682 1 A G scaffold21920 ScafM INDEL 0002.scaffold00003 1177684 1 . A scaffold21920 ScafM INDEL 0002.scaffold00003 1177695 1 . T scaffold21920 ScafM SNP 0002.scaffold00003 1177715 1 T G scaffold21920 ScafM SNP 0002.scaffold00003 1177880 1 A T scaffold21920 ScafM SNP 0002.scaffold00003 1177883 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1177961 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1177976 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1177997 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1178000 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1178019 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1178034 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1178061 1 C T scaffold21920 ReadM SNP 0002.scaffold00003 1178111 1 A G - ReadM SNP 0002.scaffold00003 1178262 1 G C - ReadM SNP 0002.scaffold00003 1178303 1 C A - ReadM SNP 0002.scaffold00003 1178346 1 G A - Both SNP 0002.scaffold00003 1178362 1 G C scaffold21920 ScafM SNP 0002.scaffold00003 1178416 1 T G scaffold21920 ScafM INDEL 0002.scaffold00003 1178434 36 CTCTATCAACCACTACATGCTTATACTAGATCTAAG .................................... scaffold21920 ScafM INDEL 0002.scaffold00003 1178472 12 CTCTACAACTTA ............ scaffold21920 ScafM INDEL 0002.scaffold00003 1178486 4 ATCC .... scaffold21920 ScafM INDEL 0002.scaffold00003 1178491 1 C . scaffold21920 ScafM SNP 0002.scaffold00003 1178539 1 T G scaffold21920 ScafM SNP 0002.scaffold00003 1178545 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1178547 1 A G scaffold21920 Both INDEL 0002.scaffold00003 1178580 1 . T scaffold21920 Both SNP 0002.scaffold00003 1178599 1 T A scaffold21920 Both SNP 0002.scaffold00003 1178724 1 G T scaffold21920 Both SNP 0002.scaffold00003 1178761 1 C A scaffold21920 Both SNP 0002.scaffold00003 1178774 1 A T scaffold21920 Both INDEL 0002.scaffold00003 1178811 1 . A scaffold21920 ScafM SNP 0002.scaffold00003 1178892 1 A C scaffold21920 ScafM SNP 0002.scaffold00003 1178898 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1178907 1 G C scaffold21920 ScafM SNP 0002.scaffold00003 1178928 1 C G scaffold21920 Both INDEL 0002.scaffold00003 1178964 2 .. AG scaffold21920 Both SNP 0002.scaffold00003 1179012 1 G T scaffold21920 Both SNP 0002.scaffold00003 1179050 1 A G scaffold21920 Both SNP 0002.scaffold00003 1179056 1 A C scaffold21920 Both SNP 0002.scaffold00003 1179150 1 A T scaffold21920 Both SNP 0002.scaffold00003 1179182 1 C T scaffold21920 ScafM INDEL 0002.scaffold00003 1179242 2 .. AA scaffold21920 ScafM SNP 0002.scaffold00003 1179285 1 T A scaffold21920 ScafM INDEL 0002.scaffold00003 1179290 1 . A scaffold21920 ScafM INDEL 0002.scaffold00003 1179295 2 .. AT scaffold21920 ScafM INDEL 0002.scaffold00003 1179296 1 . C scaffold21920 Both INDEL 0002.scaffold00003 1179337 1 A . scaffold21920 Both SNP 0002.scaffold00003 1179409 1 C T scaffold21920 Both INDEL 0002.scaffold00003 1179529 1 . C scaffold21920 Both SNP 0002.scaffold00003 1179608 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1179617 1 C T scaffold21920 ScafM SNP 0002.scaffold00003 1179630 1 A C scaffold21920 ReadM SNP 0002.scaffold00003 1179859 1 A G - ReadM SNP 0002.scaffold00003 1179864 1 G C - Both SNP 0002.scaffold00003 1179914 1 T C scaffold21920 Both SNP 0002.scaffold00003 1180017 1 G A scaffold21920 Both SNP 0002.scaffold00003 1180038 1 G A scaffold21920 Both SNP 0002.scaffold00003 1180071 1 A C scaffold21920 Both SNP 0002.scaffold00003 1180153 1 G C scaffold21920 Both SNP 0002.scaffold00003 1180165 1 C G scaffold21920 ScafM SNP 0002.scaffold00003 1180196 1 A T scaffold21920 ScafM INDEL 0002.scaffold00003 1180198 1 . A scaffold21920 ScafM SNP 0002.scaffold00003 1180200 1 G T scaffold21920 Both SNP 0002.scaffold00003 1180225 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1180325 1 T A scaffold21920 ScafM SNP 0002.scaffold00003 1180348 1 T A scaffold21920 ScafM INDEL 0002.scaffold00003 1180350 1 . A scaffold21920 ScafM SNP 0002.scaffold00003 1180357 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1180395 1 C A scaffold21920 ScafM SNP 0002.scaffold00003 1180398 1 T C scaffold21920 ScafM SNP 0002.scaffold00003 1180464 1 G T scaffold21920 Both SNP 0002.scaffold00003 1180537 1 T A scaffold21920 Both SNP 0002.scaffold00003 1180539 1 T C scaffold21920 Both SNP 0002.scaffold00003 1180585 1 G C scaffold21920 Both SNP 0002.scaffold00003 1180716 1 G C scaffold21920 Both SNP 0002.scaffold00003 1180725 1 A G scaffold21920 Both SNP 0002.scaffold00003 1180744 1 A C scaffold21920 Both SNP 0002.scaffold00003 1180798 1 A G scaffold21920 Both SNP 0002.scaffold00003 1180809 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1180834 1 G T scaffold21920 ScafM SNP 0002.scaffold00003 1180855 1 G A scaffold21920 Both INDEL 0002.scaffold00003 1180895 2 .. GG scaffold21920 Both SNP 0002.scaffold00003 1180909 1 A T scaffold21920 Both SNP 0002.scaffold00003 1181032 1 T A scaffold21920 ScafM INDEL 0002.scaffold00003 1181043 6 ...... TTGTTC scaffold21920 ScafM SNP 0002.scaffold00003 1181055 1 A G scaffold21920 Both SNP 0002.scaffold00003 1181073 1 A G scaffold21920 Both SNP 0002.scaffold00003 1181077 1 A C scaffold21920 Both SNP 0002.scaffold00003 1181109 1 G T scaffold21920 Both SNP 0002.scaffold00003 1181329 1 A G scaffold21920 Both SNP 0002.scaffold00003 1181434 1 G A scaffold21920 Both SNP 0002.scaffold00003 1181505 1 C T scaffold21920 Both INDEL 0002.scaffold00003 1181648 1 A . scaffold21920 Both SNP 0002.scaffold00003 1181736 1 T C scaffold21920 Both INDEL 0002.scaffold00003 1181768 1 A . scaffold21920 Both SNP 0002.scaffold00003 1181860 1 G C scaffold21920 Both SNP 0002.scaffold00003 1181882 1 T C scaffold21920 Both SNP 0002.scaffold00003 1181916 1 T C scaffold21920 Both SNP 0002.scaffold00003 1181953 1 T C scaffold21920 Both INDEL 0002.scaffold00003 1181990 2 .. AA scaffold21920 Both SNP 0002.scaffold00003 1182054 1 C G scaffold21920 Both SNP 0002.scaffold00003 1182098 1 G C scaffold21920 Both SNP 0002.scaffold00003 1182202 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1182285 1 C G scaffold21920 ScafM SNP 0002.scaffold00003 1182298 1 T C scaffold21920 Both SNP 0002.scaffold00003 1182391 1 G T scaffold21920 ScafM SNP 0002.scaffold00003 1182424 1 C G scaffold21920 ScafM SNP 0002.scaffold00003 1182428 2 AT CC scaffold21920 ScafM INDEL 0002.scaffold00003 1182436 5 ..... CCCCG scaffold21920 ScafM SNP 0002.scaffold00003 1182443 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1182840 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1182874 1 C A scaffold21920 Both SNP 0002.scaffold00003 1182985 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1182993 1 C T scaffold21920 Both SNP 0002.scaffold00003 1183042 1 T C scaffold21920 Both SNP 0002.scaffold00003 1183051 1 G A scaffold21920 Both SNP 0002.scaffold00003 1183072 1 A G scaffold21920 Both SNP 0002.scaffold00003 1183321 1 C T scaffold21920 Both SNP 0002.scaffold00003 1183489 1 T G scaffold21920 ScafM SNP 0002.scaffold00003 1183774 1 A G scaffold21920 ScafM SNP 0002.scaffold00003 1183782 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1183790 1 G A scaffold21920 ScafM SNP 0002.scaffold00003 1184127 1 C T scaffold5713 ScafM SNP 0002.scaffold00003 1184182 1 G T scaffold5713 ScafM SNP 0002.scaffold00003 1184196 1 G T scaffold5713 ReadM SNP 0002.scaffold00003 1184266 1 A G - ReadM SNP 0002.scaffold00003 1184271 1 C A - ReadM SNP 0002.scaffold00003 1184274 1 G A - ReadM SNP 0002.scaffold00003 1184531 1 T A - Both SNP 0002.scaffold00003 1184588 1 A C C13575529 ScafM INDEL 0002.scaffold00003 1184616 4 .... TCTC C13575529 ReadM SNP 0002.scaffold00003 1184744 1 T C - Both SNP 0002.scaffold00003 1184856 1 G C C13575529 Both SNP 0002.scaffold00003 1184863 1 T C C13575529 Both SNP 0002.scaffold00003 1184941 1 T C C13575529 Both SNP 0002.scaffold00003 1184951 1 G C C13575529 Both SNP 0002.scaffold00003 1185108 1 G A C13575529 Both SNP 0002.scaffold00003 1185202 1 G C C13575529 Both SNP 0002.scaffold00003 1185211 1 G C C13575529 Both SNP 0002.scaffold00003 1185270 1 T G C13575529 ReadM SNP 0002.scaffold00003 1185438 1 A T - ReadM SNP 0002.scaffold00003 1185491 1 C T - ReadM SNP 0002.scaffold00003 1185511 1 C T - Both SNP 0002.scaffold00003 1185751 1 G T C13575529 Both SNP 0002.scaffold00003 1185893 1 C T C13575529 Both SNP 0002.scaffold00003 1185918 1 C T C13575529 ScafM SNP 0002.scaffold00003 1185934 1 C G C13575529 ScafM SNP 0002.scaffold00003 1185947 2 GG AA C13575529 ScafM SNP 0002.scaffold00003 1185952 1 A G C13575529 ScafM SNP 0002.scaffold00003 1185986 1 T A C13575529 ScafM SNP 0002.scaffold00003 1186021 1 A T C13575529 ScafM INDEL 0002.scaffold00003 1186029 6 ...... AGACCC C13575529 ScafM INDEL 0002.scaffold00003 1186030 8 ........ GAAACACA C13575529 Both SNP 0002.scaffold00003 1186174 1 T C C13575529 Both SNP 0002.scaffold00003 1186335 1 C T C13575529 ScafM SNP 0002.scaffold00003 1186341 1 G C C13575529 ScafM SNP 0002.scaffold00003 1186343 1 C T C13575529 ScafM SNP 0002.scaffold00003 1186398 2 TA GT C13575529 ReadM SNP 0002.scaffold00003 1186486 1 G A - ReadM SNP 0002.scaffold00003 1186684 1 A T - ReadM INDEL 0002.scaffold00003 1186695 1 C . - ScafM SNP 0002.scaffold00003 1186812 1 C A C13575529 ScafM SNP 0002.scaffold00003 1186816 1 C T C13575529 ScafM SNP 0002.scaffold00003 1186821 1 G A C13575529 ScafM SNP 0002.scaffold00003 1186827 1 C T C13575529 ReadM SNP 0002.scaffold00003 1186848 1 T C - ReadM SNP 0002.scaffold00003 1186871 1 A C - ReadM SNP 0002.scaffold00003 1186928 1 C T - ReadM SNP 0002.scaffold00003 1186945 1 G A - ReadM SNP 0002.scaffold00003 1187078 1 G T - ReadM SNP 0002.scaffold00003 1187115 1 A G - ReadM SNP 0002.scaffold00003 1187141 1 A T - ReadM SNP 0002.scaffold00003 1187151 1 A G - ReadM SNP 0002.scaffold00003 1187282 1 T C - ReadM SNP 0002.scaffold00003 1187293 1 C G - ReadM SNP 0002.scaffold00003 1187448 1 T A - ReadM SNP 0002.scaffold00003 1187589 1 C A - ReadM SNP 0002.scaffold00003 1187632 1 A C - ReadM SNP 0002.scaffold00003 1187661 1 C T - ReadM SNP 0002.scaffold00003 1187890 1 G A - ReadM SNP 0002.scaffold00003 1187910 1 T C - ReadM SNP 0002.scaffold00003 1188044 1 T A - ReadM SNP 0002.scaffold00003 1188071 1 A G - ReadM SNP 0002.scaffold00003 1188093 1 T C - ReadM INDEL 0002.scaffold00003 1188305 2 TG .. - ReadM SNP 0002.scaffold00003 1188351 1 G T - ReadM SNP 0002.scaffold00003 1188455 1 G A - ReadM SNP 0002.scaffold00003 1188584 1 T C - ReadM SNP 0002.scaffold00003 1188607 1 C T - ReadM SNP 0002.scaffold00003 1188623 1 C T - ReadM SNP 0002.scaffold00003 1188796 1 A C - ScafM SNP 0002.scaffold00003 1188908 1 T C C13575529 ScafM INDEL 0002.scaffold00003 1188920 8 ........ TATCCCAA C13575529 ScafM SNP 0002.scaffold00003 1188937 1 A T C13575529 Both SNP 0002.scaffold00003 1189000 1 G A C13575529 Both SNP 0002.scaffold00003 1189006 1 G C C13575529 Both SNP 0002.scaffold00003 1189026 1 A G C13575529 Both SNP 0002.scaffold00003 1189085 1 G C C13575529 Both SNP 0002.scaffold00003 1189112 1 T G C13575529 ScafM SNP 0002.scaffold00003 1189127 1 T C C13575529 ReadM SNP 0002.scaffold00003 1189199 1 G A - ReadM SNP 0002.scaffold00003 1189206 1 A G - ReadM SNP 0002.scaffold00003 1189244 1 A T - ReadM SNP 0002.scaffold00003 1189251 1 T A - ReadM SNP 0002.scaffold00003 1189265 1 G T - ReadM SNP 0002.scaffold00003 1189302 1 A G - Both SNP 0002.scaffold00003 1189490 1 A G C13575529 ReadM SNP 0002.scaffold00003 1189507 1 C T - ReadM SNP 0002.scaffold00003 1190401 1 C G - ReadM SNP 0002.scaffold00003 1190445 1 C T - ReadM INDEL 0002.scaffold00003 1190467 1 T . - ReadM SNP 0002.scaffold00003 1190502 1 G A - ReadM SNP 0002.scaffold00003 1190627 1 C T - ReadM SNP 0002.scaffold00003 1190657 1 T C - ReadM SNP 0002.scaffold00003 1190688 1 A G - ReadM SNP 0002.scaffold00003 1190721 1 A G - ReadM SNP 0002.scaffold00003 1190777 1 G T - ReadM SNP 0002.scaffold00003 1190795 1 C A - ReadM SNP 0002.scaffold00003 1190944 1 G T - ReadM SNP 0002.scaffold00003 1190998 1 C T - ReadM SNP 0002.scaffold00003 1191026 1 T C - ReadM SNP 0002.scaffold00003 1191078 1 C T - ReadM SNP 0002.scaffold00003 1191093 1 A G - ReadM SNP 0002.scaffold00003 1191112 1 A C - ReadM INDEL 0002.scaffold00003 1191182 1 . A - Both SNP 0002.scaffold00003 1191288 1 C G scaffold3310 ReadM SNP 0002.scaffold00003 1191451 1 C T - ReadM SNP 0002.scaffold00003 1191486 1 G A - ReadM SNP 0002.scaffold00003 1191582 1 G A - ReadM SNP 0002.scaffold00003 1191650 1 G A - Both SNP 0002.scaffold00003 1191753 1 A G scaffold3310 Both SNP 0002.scaffold00003 1191796 1 A C scaffold3310 Both SNP 0002.scaffold00003 1191852 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1191994 2 TG CA scaffold3310 Both SNP 0002.scaffold00003 1192011 1 C T scaffold3310 Both SNP 0002.scaffold00003 1192048 1 T C scaffold3310 Both SNP 0002.scaffold00003 1192222 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1192248 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1192292 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1192298 1 C T scaffold3310 ScafM INDEL 0002.scaffold00003 1192331 31 TCTGGGATGTCCATGATAGAAAAAGGTCATG ............................... scaffold3310 Both SNP 0002.scaffold00003 1192389 1 G A scaffold3310 Both SNP 0002.scaffold00003 1192453 1 A T scaffold3310 Both SNP 0002.scaffold00003 1192561 1 C T scaffold3310 Both SNP 0002.scaffold00003 1192760 2 TG CA scaffold3310 Both SNP 0002.scaffold00003 1192935 1 C G scaffold3310 Both SNP 0002.scaffold00003 1193000 1 C T scaffold3310 Both SNP 0002.scaffold00003 1193058 1 T A scaffold3310 Both SNP 0002.scaffold00003 1193064 1 T C scaffold3310 Both SNP 0002.scaffold00003 1193367 1 G A scaffold3310 Both SNP 0002.scaffold00003 1193558 1 C T scaffold3310 Both SNP 0002.scaffold00003 1193573 1 G T scaffold3310 Both SNP 0002.scaffold00003 1193677 1 A T scaffold3310 Both SNP 0002.scaffold00003 1193862 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1193946 1 A T scaffold3310 Both SNP 0002.scaffold00003 1194142 1 C A scaffold3310 Both SNP 0002.scaffold00003 1194452 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1194495 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1194503 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1194570 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1194650 2 .. AT scaffold3310 ScafM SNP 0002.scaffold00003 1194732 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1194742 1 C A scaffold3310 Both SNP 0002.scaffold00003 1194767 1 T C scaffold3310 Both SNP 0002.scaffold00003 1194782 1 T C scaffold3310 Both SNP 0002.scaffold00003 1194822 1 G C scaffold3310 Both SNP 0002.scaffold00003 1194881 1 T G scaffold3310 Both SNP 0002.scaffold00003 1194916 1 T A scaffold3310 Both SNP 0002.scaffold00003 1194930 1 T C scaffold3310 ReadM SNP 0002.scaffold00003 1194964 1 T C - ScafM SNP 0002.scaffold00003 1195081 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1195088 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1195103 1 C T scaffold3310 ReadM SNP 0002.scaffold00003 1195189 1 A C - ReadM SNP 0002.scaffold00003 1195219 1 T G - ReadM SNP 0002.scaffold00003 1195385 1 G C - ReadM SNP 0002.scaffold00003 1195405 1 T G - ReadM SNP 0002.scaffold00003 1195440 1 G C - ReadM SNP 0002.scaffold00003 1195489 1 A C - ReadM SNP 0002.scaffold00003 1195678 1 A C - ReadM SNP 0002.scaffold00003 1195689 1 C T - ReadM SNP 0002.scaffold00003 1195853 1 T G - Both SNP 0002.scaffold00003 1195887 1 A G scaffold3310 ReadM SNP 0002.scaffold00003 1195950 1 A G - ReadM SNP 0002.scaffold00003 1196094 1 T A - ReadM SNP 0002.scaffold00003 1196400 1 A G - ReadM SNP 0002.scaffold00003 1196455 1 A G - Both SNP 0002.scaffold00003 1196519 1 G T scaffold3310 ScafM INDEL 0002.scaffold00003 1196669 4 .... GAAA scaffold3310 Both SNP 0002.scaffold00003 1196709 1 T C scaffold3310 Both SNP 0002.scaffold00003 1196758 1 A G scaffold3310 Both SNP 0002.scaffold00003 1196801 1 A G scaffold3310 Both SNP 0002.scaffold00003 1196814 1 A G scaffold3310 Both SNP 0002.scaffold00003 1196867 1 A G scaffold3310 Both SNP 0002.scaffold00003 1196892 1 T C scaffold3310 Both SNP 0002.scaffold00003 1196915 1 A G scaffold3310 Both SNP 0002.scaffold00003 1196944 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1196999 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1197013 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1197018 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197022 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1197034 6 AATAAC ...... scaffold3310 ScafM SNP 0002.scaffold00003 1197059 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1197104 1 A G scaffold3310 ScafM INDEL 0002.scaffold00003 1197112 5 ..... AAGAG scaffold3310 Both SNP 0002.scaffold00003 1197163 1 C G scaffold3310 Both SNP 0002.scaffold00003 1197223 1 T C scaffold3310 Both SNP 0002.scaffold00003 1197232 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1197268 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1197274 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1197296 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1197346 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1197416 1 G T scaffold3310 Both SNP 0002.scaffold00003 1197422 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1197476 1 C T scaffold3310 Both SNP 0002.scaffold00003 1197479 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197481 1 G A scaffold3310 Both SNP 0002.scaffold00003 1197566 1 C T scaffold3310 Both SNP 0002.scaffold00003 1197580 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1197595 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1197620 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1197626 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1197643 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1197650 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197675 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1197682 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1197687 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1197691 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197703 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197746 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1197764 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1197783 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1197787 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1197789 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1197793 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1197818 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1197820 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1197833 1 G C scaffold3310 Both SNP 0002.scaffold00003 1197865 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1198096 1 A G scaffold3310 ScafM INDEL 0002.scaffold00003 1198126 5 ..... CAACT scaffold3310 ScafM SNP 0002.scaffold00003 1198142 1 A G scaffold3310 Both SNP 0002.scaffold00003 1198198 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1198273 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1198317 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1198322 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1198342 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1198367 1 G C scaffold3310 ScafM INDEL 0002.scaffold00003 1198380 39 AGGCGGTAAAGATACTATTGCTATAGAAACAAACAAAGA ....................................... scaffold3310 ScafM SNP 0002.scaffold00003 1198468 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1198493 1 A T scaffold3310 ScafM INDEL 0002.scaffold00003 1198604 18 CATATTTAACATATAATG .................. scaffold3310 ScafM INDEL 0002.scaffold00003 1198633 4 GAAA .... scaffold3310 ScafM SNP 0002.scaffold00003 1198638 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1198699 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1198701 1 G A scaffold3310 ScafM INDEL 0002.scaffold00003 1198734 3 ... TAA scaffold3310 ScafM SNP 0002.scaffold00003 1198799 1 C T scaffold3310 ScafM INDEL 0002.scaffold00003 1198817 3 GAG ... scaffold3310 ScafM SNP 0002.scaffold00003 1198823 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1198849 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1198856 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1198873 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1198884 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1198893 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1198896 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1198920 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1198964 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1198966 2 GA TC scaffold3310 ScafM SNP 0002.scaffold00003 1198976 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1198991 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1199039 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1199047 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1199071 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1199103 2 TG CA scaffold3310 ScafM SNP 0002.scaffold00003 1199155 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1199166 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1199208 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1199275 2 .. GT scaffold3310 ScafM SNP 0002.scaffold00003 1199279 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1199291 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1199329 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1199332 1 T C scaffold3310 ReadM SNP 0002.scaffold00003 1199361 1 C T - ScafM SNP 0002.scaffold00003 1199518 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1199534 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1199545 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1199558 1 A G scaffold3310 ScafM INDEL 0002.scaffold00003 1199882 1 A . scaffold3310 ScafM SNP 0002.scaffold00003 1199886 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1199897 1 G T scaffold3310 ScafM INDEL 0002.scaffold00003 1199962 14 ATTGTTATATACAC .............. scaffold3310 ScafM INDEL 0002.scaffold00003 1200010 7 ....... ACTTTTA scaffold3310 ScafM SNP 0002.scaffold00003 1200051 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1200071 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1200078 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1200080 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1200087 1 A T scaffold3310 ScafM INDEL 0002.scaffold00003 1200123 1 T . scaffold3310 ScafM SNP 0002.scaffold00003 1200185 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1200199 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1200899 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1200926 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1200934 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1200942 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1200944 2 CC TT scaffold3310 ScafM SNP 0002.scaffold00003 1200963 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1200972 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201051 1 T G scaffold3310 ScafM INDEL 0002.scaffold00003 1201115 1 . A scaffold3310 ScafM SNP 0002.scaffold00003 1201138 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201142 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1201150 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1201180 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201184 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201191 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1201196 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1201206 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1201250 16 CTATCTTTTAAACCTC ................ scaffold3310 ScafM SNP 0002.scaffold00003 1201274 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201278 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1201329 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1201338 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1201362 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201364 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201377 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201382 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201393 3 CTA TCG scaffold3310 ScafM SNP 0002.scaffold00003 1201439 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201493 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1201510 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201516 1 G T scaffold3310 ScafM INDEL 0002.scaffold00003 1201526 2 .. AT scaffold3310 ScafM SNP 0002.scaffold00003 1201537 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1201556 1 A T scaffold3310 Both SNP 0002.scaffold00003 1201584 1 T G scaffold3310 Both SNP 0002.scaffold00003 1201627 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1201732 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1201757 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1201780 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1201811 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1201839 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1201844 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1201847 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1201859 1 G A scaffold3310 Both SNP 0002.scaffold00003 1201963 1 G A scaffold3310 Both SNP 0002.scaffold00003 1201969 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1201994 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1202020 1 G C scaffold3310 ScafM SNP 0002.scaffold00003 1202024 1 C G scaffold3310 ReadM SNP 0002.scaffold00003 1202573 1 A G - ReadM SNP 0002.scaffold00003 1202673 1 T A - ReadM SNP 0002.scaffold00003 1202676 1 G T - ReadM SNP 0002.scaffold00003 1204588 1 C T - ReadM SNP 0002.scaffold00003 1204604 1 G C - ScafM SNP 0002.scaffold00003 1205915 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1205920 1 C T scaffold3310 ScafM INDEL 0002.scaffold00003 1205923 1 . A scaffold3310 ScafM SNP 0002.scaffold00003 1205947 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1205956 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1205978 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1205980 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1205985 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1206043 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1206110 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1206119 1 G . scaffold3310 ScafM SNP 0002.scaffold00003 1206134 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1206152 1 C T scaffold3310 Both SNP 0002.scaffold00003 1206202 1 A G scaffold3310 Both SNP 0002.scaffold00003 1206249 1 A G scaffold3310 Both SNP 0002.scaffold00003 1206263 1 A T scaffold3310 Both SNP 0002.scaffold00003 1206307 1 A G scaffold3310 Both SNP 0002.scaffold00003 1206334 1 G T scaffold3310 Both SNP 0002.scaffold00003 1206416 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1206421 1 A G scaffold3310 Both SNP 0002.scaffold00003 1206446 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1206507 1 C A scaffold3310 ScafM INDEL 0002.scaffold00003 1206511 1 T . scaffold3310 ScafM SNP 0002.scaffold00003 1206556 1 A G scaffold3310 ScafM INDEL 0002.scaffold00003 1206569 2 .. TG scaffold3310 ScafM SNP 0002.scaffold00003 1206617 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1206647 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1206661 1 C G scaffold3310 ScafM SNP 0002.scaffold00003 1206664 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1206676 1 G T scaffold3310 ScafM SNP 0002.scaffold00003 1206679 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1206724 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1206780 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1206817 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1206852 2 CA TG scaffold3623 ScafM SNP 0002.scaffold00003 1206863 1 C A scaffold3623 ScafM SNP 0002.scaffold00003 1206867 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1206896 1 A G scaffold3623 ScafM INDEL 0002.scaffold00003 1206914 1 . T scaffold3623 ScafM SNP 0002.scaffold00003 1206916 1 C A scaffold3623 ScafM SNP 0002.scaffold00003 1206918 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1206937 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1206987 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1206994 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1207024 1 G T scaffold3623 ScafM INDEL 0002.scaffold00003 1207058 4 ATAA .... scaffold3623 ScafM SNP 0002.scaffold00003 1207065 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1207085 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1207094 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1207103 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1207114 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1207148 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1207242 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1207244 1 C G scaffold3623 ScafM INDEL 0002.scaffold00003 1207251 3 ... AGT scaffold3623 ScafM SNP 0002.scaffold00003 1207278 1 A C scaffold3623 ScafM SNP 0002.scaffold00003 1207319 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1207333 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1207364 2 TG AT scaffold3623 ReadM SNP 0002.scaffold00003 1207847 1 C A - ScafM INDEL 0002.scaffold00003 1210361 3 ATA ... scaffold1266 ScafM SNP 0002.scaffold00003 1210382 1 C G scaffold1266 ScafM SNP 0002.scaffold00003 1210492 1 T C scaffold1266 ScafM INDEL 0002.scaffold00003 1210519 1 A . scaffold1266 ScafM SNP 0002.scaffold00003 1210545 1 A G scaffold1266 ScafM SNP 0002.scaffold00003 1210556 1 G T scaffold1266 ScafM SNP 0002.scaffold00003 1212530 1 C G scaffold1266 ScafM INDEL 0002.scaffold00003 1213612 1 A . scaffold3623 ScafM INDEL 0002.scaffold00003 1213634 1 A . scaffold3623 ScafM SNP 0002.scaffold00003 1213661 1 G C scaffold3623 ScafM INDEL 0002.scaffold00003 1213670 10 .......... ACAATTTTTG scaffold3623 ScafM SNP 0002.scaffold00003 1213711 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1213742 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1213746 1 C G scaffold3623 ScafM INDEL 0002.scaffold00003 1213790 1 T . scaffold3623 ScafM SNP 0002.scaffold00003 1213795 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1213855 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1213882 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1213897 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1213900 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1213909 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1213911 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1213946 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1213967 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1213993 1 C A scaffold3623 ScafM SNP 0002.scaffold00003 1214060 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1214125 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1214142 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1214166 1 C A scaffold3623 ScafM SNP 0002.scaffold00003 1214190 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1214200 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1214223 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1214240 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1214281 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1214310 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1214312 1 T A scaffold3623 ScafM INDEL 0002.scaffold00003 1214314 1 . T scaffold3623 ScafM INDEL 0002.scaffold00003 1214334 1 . T scaffold3623 ScafM SNP 0002.scaffold00003 1214358 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1214373 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1214867 1 T C scaffold15230 ScafM SNP 0002.scaffold00003 1214933 1 C T scaffold15230 ScafM SNP 0002.scaffold00003 1214941 1 G T scaffold15230 ScafM SNP 0002.scaffold00003 1214953 1 G A scaffold15230 ScafM INDEL 0002.scaffold00003 1214956 1 . T scaffold15230 ScafM SNP 0002.scaffold00003 1214974 1 T A scaffold15230 ScafM SNP 0002.scaffold00003 1214982 3 TAA AGT scaffold15230 ScafM SNP 0002.scaffold00003 1214997 1 T G scaffold15230 ScafM SNP 0002.scaffold00003 1215023 1 G A scaffold15230 ScafM SNP 0002.scaffold00003 1215035 1 C A scaffold15230 ScafM SNP 0002.scaffold00003 1215066 1 T C scaffold15230 ScafM SNP 0002.scaffold00003 1215161 2 CA TT scaffold15230 ScafM SNP 0002.scaffold00003 1215181 1 T C scaffold15230 ScafM SNP 0002.scaffold00003 1215186 1 G A scaffold15230 ScafM SNP 0002.scaffold00003 1217098 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1217104 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1217133 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1217160 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1217261 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1217286 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1217363 2 CC TT scaffold3310 ScafM SNP 0002.scaffold00003 1217406 1 C G scaffold3310 ScafM INDEL 0002.scaffold00003 1217474 2 .. TT scaffold3310 ScafM INDEL 0002.scaffold00003 1217518 4 .... ACTG scaffold3310 ScafM INDEL 0002.scaffold00003 1217520 11 ........... CCAAATCTTGA scaffold3310 ScafM INDEL 0002.scaffold00003 1217522 20 .................... TCCACCCTAGTCTTTTCTTT scaffold3310 ScafM INDEL 0002.scaffold00003 1217523 3 ... TTT scaffold3310 ScafM INDEL 0002.scaffold00003 1217524 10 .......... TTAAAAAAAA scaffold3310 ScafM INDEL 0002.scaffold00003 1217529 9 ......... CAAAATTTG scaffold3310 ScafM INDEL 0002.scaffold00003 1217534 9 ......... GACGAAAAA scaffold3310 ScafM INDEL 0002.scaffold00003 1217535 4 .... GCAA scaffold3310 ScafM SNP 0002.scaffold00003 1217541 1 T G scaffold3310 ScafM SNP 0002.scaffold00003 1217552 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1217594 1 G A scaffold3310 ScafM INDEL 0002.scaffold00003 1217643 3 AAA ... scaffold3310 ScafM SNP 0002.scaffold00003 1217658 1 A C scaffold3310 ScafM SNP 0002.scaffold00003 1217682 1 A G scaffold3310 ScafM INDEL 0002.scaffold00003 1217715 8 ........ AGTCCATA scaffold3310 ScafM SNP 0002.scaffold00003 1217750 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1217777 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1217782 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1217791 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1217810 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1217819 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1217845 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1217920 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1217929 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1217934 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1217970 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1217978 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1218008 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1218039 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1218052 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1218080 1 A T scaffold3310 ScafM INDEL 0002.scaffold00003 1218118 1 . A scaffold3310 ScafM SNP 0002.scaffold00003 1218144 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1218149 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1218154 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1218162 1 T G scaffold3310 ScafM INDEL 0002.scaffold00003 1218213 1 . T scaffold3310 ScafM SNP 0002.scaffold00003 1218236 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1218251 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1218258 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1218297 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1218304 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1218315 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1218332 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1218378 1 . T scaffold3310 ScafM SNP 0002.scaffold00003 1218382 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1218439 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1218551 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1218558 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1218725 1 G C scaffold3310 ScafM INDEL 0002.scaffold00003 1218738 3 ... ATC scaffold3310 ScafM SNP 0002.scaffold00003 1218739 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1218819 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1218830 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1219136 2 AC .. scaffold4360 ScafM SNP 0002.scaffold00003 1219187 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219196 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1219200 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219204 1 T A scaffold4360 ScafM SNP 0002.scaffold00003 1219226 1 T C scaffold4360 ScafM SNP 0002.scaffold00003 1219234 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219239 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1219246 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1219262 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219280 1 C A scaffold4360 ScafM SNP 0002.scaffold00003 1219282 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1219285 1 A C scaffold4360 ScafM INDEL 0002.scaffold00003 1219287 1 C . scaffold4360 ScafM INDEL 0002.scaffold00003 1219289 1 . G scaffold4360 ScafM SNP 0002.scaffold00003 1219292 1 C A scaffold4360 ScafM SNP 0002.scaffold00003 1219301 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219308 1 C A scaffold4360 ScafM SNP 0002.scaffold00003 1219326 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219337 1 C T scaffold4360 ScafM SNP 0002.scaffold00003 1219339 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1219343 1 T C scaffold4360 ScafM INDEL 0002.scaffold00003 1219352 2 TT .. scaffold4360 ScafM SNP 0002.scaffold00003 1219366 1 C G scaffold4360 ScafM SNP 0002.scaffold00003 1219374 1 G A scaffold4360 ScafM SNP 0002.scaffold00003 1219377 1 G T scaffold4360 ScafM SNP 0002.scaffold00003 1219388 1 C G scaffold4360 ScafM SNP 0002.scaffold00003 1219398 1 T C scaffold4360 ScafM SNP 0002.scaffold00003 1219425 1 G A scaffold4360 ScafM SNP 0002.scaffold00003 1219432 1 A G scaffold4360 ScafM SNP 0002.scaffold00003 1220109 1 A T scaffold3310 ScafM SNP 0002.scaffold00003 1220117 1 G A scaffold3310 ScafM SNP 0002.scaffold00003 1220287 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1220296 1 T C scaffold3310 ScafM INDEL 0002.scaffold00003 1220334 2 .. AC scaffold3310 ScafM SNP 0002.scaffold00003 1220376 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1220386 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1220388 1 T C scaffold3310 ReadM SNP 0002.scaffold00003 1220751 1 C A - ScafM SNP 0002.scaffold00003 1220843 1 T A scaffold3310 ScafM SNP 0002.scaffold00003 1220914 1 A G scaffold3310 ScafM SNP 0002.scaffold00003 1220916 1 C T scaffold3310 ScafM SNP 0002.scaffold00003 1220948 1 C A scaffold3310 ScafM SNP 0002.scaffold00003 1220951 1 T C scaffold3310 ScafM SNP 0002.scaffold00003 1220987 1 A G scaffold3310 ReadM SNP 0002.scaffold00003 1221219 1 C T - ReadM SNP 0002.scaffold00003 1221228 1 C A - ReadM SNP 0002.scaffold00003 1221325 1 T C - ReadM SNP 0002.scaffold00003 1221347 1 A G - ScafM SNP 0002.scaffold00003 1225998 2 GA TG scaffold2717 ScafM SNP 0002.scaffold00003 1226002 1 A G scaffold2717 ScafM SNP 0002.scaffold00003 1226017 1 T G scaffold2717 ScafM INDEL 0002.scaffold00003 1226019 1 G . scaffold2717 ScafM SNP 0002.scaffold00003 1226021 2 TT CC scaffold2717 ScafM INDEL 0002.scaffold00003 1226032 2 .C TG scaffold2717 ScafM INDEL 0002.scaffold00003 1226036 1 T . scaffold2717 ScafM SNP 0002.scaffold00003 1226038 1 A G scaffold2717 ScafM INDEL 0002.scaffold00003 1226049 2 .. TT scaffold2717 ScafM INDEL 0002.scaffold00003 1226050 1 . C scaffold2717 ScafM SNP 0002.scaffold00003 1226052 1 T C scaffold2717 ScafM SNP 0002.scaffold00003 1226057 2 TT CC scaffold2717 ScafM SNP 0002.scaffold00003 1226065 1 T C scaffold2717 ScafM SNP 0002.scaffold00003 1226088 1 G C scaffold2717 ScafM SNP 0002.scaffold00003 1226112 1 G A scaffold2717 ScafM SNP 0002.scaffold00003 1226126 1 G A scaffold2717 ScafM SNP 0002.scaffold00003 1226137 1 A C scaffold2717 ScafM SNP 0002.scaffold00003 1226142 1 G T scaffold2717 ScafM SNP 0002.scaffold00003 1226146 1 C T scaffold2717 ScafM SNP 0002.scaffold00003 1226161 1 A G scaffold2717 ScafM SNP 0002.scaffold00003 1226164 1 G A scaffold2717 ScafM SNP 0002.scaffold00003 1226170 1 A C scaffold2717 ScafM SNP 0002.scaffold00003 1226182 2 AT GC scaffold2717 ScafM SNP 0002.scaffold00003 1226203 2 GC AT scaffold2717 ScafM INDEL 0002.scaffold00003 1226238 14 CGGATCGGATTAAA .............. scaffold2717 ScafM SNP 0002.scaffold00003 1226261 2 TA AG scaffold2717 ScafM SNP 0002.scaffold00003 1226277 2 TT CC scaffold2717 ScafM SNP 0002.scaffold00003 1226298 1 C T scaffold2717 ScafM SNP 0002.scaffold00003 1259280 1 C T scaffold8706 ScafM SNP 0002.scaffold00003 1259299 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259348 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259355 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259363 1 G C scaffold8706 ScafM SNP 0002.scaffold00003 1259387 1 C T scaffold8706 ScafM SNP 0002.scaffold00003 1259448 1 A G scaffold8706 ScafM SNP 0002.scaffold00003 1259454 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259463 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259493 1 G A scaffold8706 ScafM SNP 0002.scaffold00003 1259543 2 AA GG scaffold8706 ScafM SNP 0002.scaffold00003 1259565 1 A G scaffold8706 ScafM SNP 0002.scaffold00003 1259569 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259571 1 C T scaffold8706 ScafM SNP 0002.scaffold00003 1259577 1 T C scaffold8706 ScafM SNP 0002.scaffold00003 1259604 1 C T scaffold8706 ReadM SNP 0002.scaffold00003 1262253 1 G A - ScafM SNP 0002.scaffold00003 1269506 1 A G scaffold2477 ScafM SNP 0002.scaffold00003 1269510 1 G C scaffold2477 ScafM SNP 0002.scaffold00003 1272846 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1272914 1 G C scaffold3623 ScafM SNP 0002.scaffold00003 1272942 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1272983 1 T C scaffold3623 ScafM INDEL 0002.scaffold00003 1273060 6 ACGGAA .....T scaffold3623 ScafM INDEL 0002.scaffold00003 1273070 2 AA .G scaffold3623 ScafM SNP 0002.scaffold00003 1273075 3 TTG GCC scaffold3623 ScafM INDEL 0002.scaffold00003 1273080 1 A . scaffold3623 ScafM INDEL 0002.scaffold00003 1273084 1 G . scaffold3623 ScafM SNP 0002.scaffold00003 1273086 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1273088 2 CG TA scaffold3623 ScafM SNP 0002.scaffold00003 1273092 2 AA CC scaffold3623 ScafM SNP 0002.scaffold00003 1273095 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1273097 1 A G scaffold3623 ScafM INDEL 0002.scaffold00003 1273098 1 . C scaffold3623 ScafM SNP 0002.scaffold00003 1273100 1 G C scaffold3623 ScafM SNP 0002.scaffold00003 1273102 1 T A scaffold3623 ScafM SNP 0002.scaffold00003 1273105 1 A C scaffold3623 ScafM INDEL 0002.scaffold00003 1273106 2 .T AG scaffold3623 ScafM SNP 0002.scaffold00003 1273116 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1273119 1 T C scaffold3623 ReadM SNP 0002.scaffold00003 1273205 1 A G - ReadM SNP 0002.scaffold00003 1273241 1 G C - ReadM SNP 0002.scaffold00003 1273378 1 G C - ReadM SNP 0002.scaffold00003 1273388 1 G A - ReadM SNP 0002.scaffold00003 1273456 1 C T - ReadM SNP 0002.scaffold00003 1273468 1 C A - ReadM SNP 0002.scaffold00003 1273581 1 G A - ReadM SNP 0002.scaffold00003 1273666 1 C T - ReadM SNP 0002.scaffold00003 1273755 1 G A - ReadM SNP 0002.scaffold00003 1273759 1 C T - ReadM SNP 0002.scaffold00003 1273771 1 C T - ReadM SNP 0002.scaffold00003 1273786 1 T C - ReadM SNP 0002.scaffold00003 1273869 1 T C - ReadM SNP 0002.scaffold00003 1273905 1 A G - ReadM SNP 0002.scaffold00003 1273958 1 T A - ReadM SNP 0002.scaffold00003 1274031 1 A G - ReadM SNP 0002.scaffold00003 1274069 1 T C - Both SNP 0002.scaffold00003 1274121 1 A T scaffold3623 Both SNP 0002.scaffold00003 1274149 1 A G scaffold3623 Both SNP 0002.scaffold00003 1274208 1 G A scaffold3623 Both SNP 0002.scaffold00003 1274215 1 A G scaffold3623 Both SNP 0002.scaffold00003 1274267 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1274308 2 CG TA scaffold3623 Both SNP 0002.scaffold00003 1274366 1 T C scaffold3623 Both SNP 0002.scaffold00003 1274384 1 C A scaffold3623 Both SNP 0002.scaffold00003 1274453 1 A T scaffold3623 Both SNP 0002.scaffold00003 1274463 1 A T scaffold3623 Both SNP 0002.scaffold00003 1274499 1 G A scaffold3623 Both SNP 0002.scaffold00003 1274504 1 A C scaffold3623 ScafM SNP 0002.scaffold00003 1274806 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1274869 1 A C scaffold3623 Both SNP 0002.scaffold00003 1274957 1 C T scaffold3623 Both SNP 0002.scaffold00003 1274965 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1275052 1 A G scaffold3623 Both SNP 0002.scaffold00003 1275103 1 T A scaffold3623 Both SNP 0002.scaffold00003 1275135 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1275237 1 T C scaffold3623 ScafM INDEL 0002.scaffold00003 1275245 1 T . scaffold3623 ReadM INDEL 0002.scaffold00003 1280919 1 . A - ReadM SNP 0002.scaffold00003 1281023 1 A C - ReadM SNP 0002.scaffold00003 1281051 1 C T - Both SNP 0002.scaffold00003 1281420 1 C T scaffold3623 ReadM SNP 0002.scaffold00003 1281595 1 C A - ReadM SNP 0002.scaffold00003 1281649 1 A C - ReadM SNP 0002.scaffold00003 1281681 1 G A - ReadM SNP 0002.scaffold00003 1281693 1 G A - ReadM SNP 0002.scaffold00003 1281947 1 T C - Both SNP 0002.scaffold00003 1281974 1 G C scaffold3623 ReadM SNP 0002.scaffold00003 1281979 1 A G - Both SNP 0002.scaffold00003 1282040 1 T C scaffold3623 Both SNP 0002.scaffold00003 1282084 1 A T scaffold3623 Both INDEL 0002.scaffold00003 1282144 1 . T scaffold3623 ReadM SNP 0002.scaffold00003 1282179 1 G T - ReadM SNP 0002.scaffold00003 1282505 1 T A - ReadM SNP 0002.scaffold00003 1282724 1 A G - ScafM SNP 0002.scaffold00003 1282947 2 AA TT scaffold3623 ScafM INDEL 0002.scaffold00003 1282953 1 T . scaffold3623 ScafM SNP 0002.scaffold00003 1282974 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1282990 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1283058 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1283061 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1283080 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1283122 1 A C scaffold3623 ScafM INDEL 0002.scaffold00003 1284027 25 TGGAAAATGTTTGAGTCTTTGGCTA ......................... scaffold3623 Both SNP 0002.scaffold00003 1284181 1 A G scaffold3623 Both SNP 0002.scaffold00003 1284183 1 A T scaffold3623 Both SNP 0002.scaffold00003 1284220 1 C A scaffold3623 Both SNP 0002.scaffold00003 1284258 1 T C scaffold3623 Both SNP 0002.scaffold00003 1284269 1 T G scaffold3623 ScafM INDEL 0002.scaffold00003 1284321 4 .... GACC scaffold3623 ScafM SNP 0002.scaffold00003 1284338 1 G A scaffold3623 Both SNP 0002.scaffold00003 1284569 1 G T scaffold3623 Both SNP 0002.scaffold00003 1284586 1 C T scaffold3623 ReadM SNP 0002.scaffold00003 1284629 1 A C - ReadM SNP 0002.scaffold00003 1284676 1 A T - Both SNP 0002.scaffold00003 1284693 1 C G scaffold3623 Both SNP 0002.scaffold00003 1284748 1 T C scaffold3623 Both SNP 0002.scaffold00003 1284755 1 A G scaffold3623 ReadM SNP 0002.scaffold00003 1284826 1 T C - ReadM SNP 0002.scaffold00003 1284828 1 T C - ReadM SNP 0002.scaffold00003 1284867 1 A G - ReadM SNP 0002.scaffold00003 1284952 1 C G - ScafM SNP 0002.scaffold00003 1285291 1 C A scaffold3623 ReadM SNP 0002.scaffold00003 1295246 1 A G - ReadM SNP 0002.scaffold00003 1295291 1 A G - ReadM SNP 0002.scaffold00003 1295320 1 A T - ReadM SNP 0002.scaffold00003 1295352 1 T C - ReadM INDEL 0002.scaffold00003 1295421 2 .. TA - ReadM INDEL 0002.scaffold00003 1295422 1 . A - ReadM SNP 0002.scaffold00003 1295434 1 G A - ReadM SNP 0002.scaffold00003 1295623 1 A G - ReadM SNP 0002.scaffold00003 1295626 1 A G - ReadM SNP 0002.scaffold00003 1295637 1 A C - ReadM SNP 0002.scaffold00003 1295684 1 G C - ReadM SNP 0002.scaffold00003 1295732 1 C T - ReadM SNP 0002.scaffold00003 1295764 1 G A - ReadM SNP 0002.scaffold00003 1295781 1 T C - ReadM SNP 0002.scaffold00003 1295887 1 C G - ReadM SNP 0002.scaffold00003 1295942 1 C T - ReadM SNP 0002.scaffold00003 1296017 1 C T - ReadM SNP 0002.scaffold00003 1296035 1 G A - ReadM SNP 0002.scaffold00003 1296063 1 A G - ReadM SNP 0002.scaffold00003 1296101 1 A G - ReadM SNP 0002.scaffold00003 1296382 1 C G - ReadM SNP 0002.scaffold00003 1296410 1 G T - Both SNP 0002.scaffold00003 1296475 1 A G scaffold3623 Both SNP 0002.scaffold00003 1296479 1 A G scaffold3623 ReadM SNP 0002.scaffold00003 1296523 1 G T - ReadM SNP 0002.scaffold00003 1296551 1 G A - ReadM INDEL 0002.scaffold00003 1296588 1 C . - Both SNP 0002.scaffold00003 1296665 1 A G scaffold3623 Both SNP 0002.scaffold00003 1296670 1 T A scaffold3623 Both SNP 0002.scaffold00003 1296718 1 T A scaffold3623 Both SNP 0002.scaffold00003 1296786 1 G A scaffold3623 ReadM SNP 0002.scaffold00003 1296885 1 A T - ReadM SNP 0002.scaffold00003 1296907 1 C T - ScafM SNP 0002.scaffold00003 1296993 1 T A scaffold3623 ScafM INDEL 0002.scaffold00003 1297003 4 .TTT AAAA scaffold3623 Both SNP 0002.scaffold00003 1297088 1 T C scaffold3623 Both SNP 0002.scaffold00003 1297109 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1297121 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1297138 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1297149 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1297175 1 C G scaffold3623 ScafM SNP 0002.scaffold00003 1297194 1 A G scaffold3623 ScafM INDEL 0002.scaffold00003 1297205 4 .... CCCC scaffold3623 ScafM SNP 0002.scaffold00003 1297213 1 A C scaffold3623 Both INDEL 0002.scaffold00003 1297243 1 . A scaffold3623 Both SNP 0002.scaffold00003 1297262 1 A C scaffold3623 Both SNP 0002.scaffold00003 1297282 1 T C scaffold3623 Both SNP 0002.scaffold00003 1297397 1 C T scaffold3623 Both SNP 0002.scaffold00003 1297462 1 C T scaffold3623 Both SNP 0002.scaffold00003 1297515 1 T G scaffold3623 Both SNP 0002.scaffold00003 1297535 1 T A scaffold3623 ReadM SNP 0002.scaffold00003 1297678 1 A T - ReadM SNP 0002.scaffold00003 1297693 1 G A - ReadM SNP 0002.scaffold00003 1297850 1 A C - ScafM INDEL 0002.scaffold00003 1297959 6 .....C AATTTT scaffold3623 ScafM SNP 0002.scaffold00003 1298013 1 C G scaffold3623 ScafM SNP 0002.scaffold00003 1298207 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1298335 1 A C scaffold3623 ScafM SNP 0002.scaffold00003 1298374 2 TT CA scaffold3623 ScafM SNP 0002.scaffold00003 1298395 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1298397 1 T C scaffold3623 ScafM INDEL 0002.scaffold00003 1298446 2 .. TT scaffold3623 ScafM SNP 0002.scaffold00003 1298465 1 C A scaffold3623 Both SNP 0002.scaffold00003 1298519 1 C T scaffold3623 Both SNP 0002.scaffold00003 1298570 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1298795 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1298810 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1298819 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1298861 1 G C scaffold3623 Both SNP 0002.scaffold00003 1298916 1 A G scaffold3623 Both SNP 0002.scaffold00003 1298932 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1299022 1 T A scaffold3623 Both SNP 0002.scaffold00003 1299197 1 C A scaffold3623 Both SNP 0002.scaffold00003 1299217 1 A C scaffold3623 ReadM SNP 0002.scaffold00003 1299266 1 A T - ReadM SNP 0002.scaffold00003 1299297 1 C T - ScafM SNP 0002.scaffold00003 1299458 1 C A scaffold3623 ScafM SNP 0002.scaffold00003 1299460 1 A G scaffold3623 Both SNP 0002.scaffold00003 1299523 1 C G scaffold3623 Both INDEL 0002.scaffold00003 1299539 1 G . scaffold3623 Both SNP 0002.scaffold00003 1299620 1 G C scaffold3623 Both SNP 0002.scaffold00003 1299790 1 C T scaffold3623 Both SNP 0002.scaffold00003 1299868 1 C G scaffold3623 Both INDEL 0002.scaffold00003 1299884 1 A . scaffold3623 Both INDEL 0002.scaffold00003 1300011 1 . A scaffold3623 Both SNP 0002.scaffold00003 1300033 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1300092 1 A G scaffold3623 Both SNP 0002.scaffold00003 1300191 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1300194 1 T A scaffold3623 Both SNP 0002.scaffold00003 1300220 1 T C scaffold3623 ReadM SNP 0002.scaffold00003 1300260 1 C G - ReadM SNP 0002.scaffold00003 1300278 1 G T - ReadM SNP 0002.scaffold00003 1300393 1 C G - ReadM SNP 0002.scaffold00003 1300436 1 C A - ReadM SNP 0002.scaffold00003 1300466 1 G A - ReadM SNP 0002.scaffold00003 1300485 1 T A - ScafM INDEL 0002.scaffold00003 1300563 2 .. CA scaffold3623 Both SNP 0002.scaffold00003 1300724 1 C A scaffold3623 Both SNP 0002.scaffold00003 1300730 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1300737 1 G A scaffold3623 Both SNP 0002.scaffold00003 1300819 1 A G scaffold3623 Both SNP 0002.scaffold00003 1300892 1 T C scaffold3623 Both SNP 0002.scaffold00003 1300913 1 C A scaffold3623 Both SNP 0002.scaffold00003 1300953 1 G T scaffold3623 ScafM SNP 0002.scaffold00003 1301036 2 TT GC scaffold3623 ScafM SNP 0002.scaffold00003 1301060 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1301062 1 T G scaffold3623 Both SNP 0002.scaffold00003 1301078 1 T C scaffold3623 Both SNP 0002.scaffold00003 1301187 1 T G scaffold3623 Both SNP 0002.scaffold00003 1301189 1 T A scaffold3623 Both SNP 0002.scaffold00003 1301265 1 T A scaffold3623 Both SNP 0002.scaffold00003 1301325 1 A C scaffold3623 Both SNP 0002.scaffold00003 1301377 1 A G scaffold3623 Both SNP 0002.scaffold00003 1301415 1 T C scaffold3623 Both INDEL 0002.scaffold00003 1301573 1 A . scaffold3623 Both INDEL 0002.scaffold00003 1301602 1 A . scaffold3623 Both SNP 0002.scaffold00003 1301757 1 A G scaffold3623 Both SNP 0002.scaffold00003 1301803 1 C T scaffold3623 Both SNP 0002.scaffold00003 1301890 1 C G scaffold3623 Both SNP 0002.scaffold00003 1301928 1 T G scaffold3623 Both SNP 0002.scaffold00003 1301997 1 G A scaffold3623 Both SNP 0002.scaffold00003 1302056 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1302073 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1302079 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1302091 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1302098 1 G T scaffold3623 Both SNP 0002.scaffold00003 1302131 1 A C scaffold3623 Both SNP 0002.scaffold00003 1302237 1 C T scaffold3623 Both SNP 0002.scaffold00003 1302348 1 G C scaffold3623 Both SNP 0002.scaffold00003 1302361 1 A G scaffold3623 Both SNP 0002.scaffold00003 1302383 1 A G scaffold3623 Both SNP 0002.scaffold00003 1302484 1 T A scaffold3623 Both SNP 0002.scaffold00003 1302534 1 A C scaffold3623 ReadM SNP 0002.scaffold00003 1302702 1 G A - ReadM SNP 0002.scaffold00003 1302760 1 C T - ReadM SNP 0002.scaffold00003 1302853 1 C A - ReadM SNP 0002.scaffold00003 1302926 1 T G - ReadM SNP 0002.scaffold00003 1302974 1 A G - ReadM SNP 0002.scaffold00003 1303015 1 G T - ReadM SNP 0002.scaffold00003 1303029 1 A T - ReadM SNP 0002.scaffold00003 1303205 1 T C - ReadM SNP 0002.scaffold00003 1303261 1 A G - ReadM SNP 0002.scaffold00003 1303437 1 C G - ReadM SNP 0002.scaffold00003 1303475 1 C G - ReadM SNP 0002.scaffold00003 1303577 1 T C - ReadM SNP 0002.scaffold00003 1303789 1 T C - ReadM SNP 0002.scaffold00003 1304009 1 A G - ReadM SNP 0002.scaffold00003 1304020 1 T C - ReadM SNP 0002.scaffold00003 1304067 1 A T - ReadM SNP 0002.scaffold00003 1304089 1 G A - ReadM SNP 0002.scaffold00003 1304184 1 T C - ReadM SNP 0002.scaffold00003 1304193 1 G C - Both SNP 0002.scaffold00003 1304338 1 A G scaffold3623 ReadM SNP 0002.scaffold00003 1304524 1 C T - ReadM SNP 0002.scaffold00003 1304674 1 T C - ReadM SNP 0002.scaffold00003 1304728 1 T C - ReadM SNP 0002.scaffold00003 1304772 1 T C - ReadM SNP 0002.scaffold00003 1304785 1 T C - ReadM SNP 0002.scaffold00003 1304857 1 G A - ReadM SNP 0002.scaffold00003 1304895 1 T G - ScafM SNP 0002.scaffold00003 1304919 1 T G scaffold3623 ScafM SNP 0002.scaffold00003 1304925 1 G A scaffold3623 Both SNP 0002.scaffold00003 1304964 1 A C scaffold3623 Both INDEL 0002.scaffold00003 1305203 2 TG .. scaffold3623 Both SNP 0002.scaffold00003 1305244 1 A G scaffold3623 ScafM SNP 0002.scaffold00003 1305285 1 C A scaffold3623 ScafM INDEL 0002.scaffold00003 1305298 3 ... CAA scaffold3623 ReadM SNP 0002.scaffold00003 1305383 1 C A - Both SNP 0002.scaffold00003 1305603 1 A C scaffold3623 ScafM SNP 0002.scaffold00003 1305727 2 GA AG scaffold3623 Both SNP 0002.scaffold00003 1305762 1 T C scaffold3623 Both SNP 0002.scaffold00003 1305767 1 T C scaffold3623 Both SNP 0002.scaffold00003 1305841 1 G A scaffold3623 Both SNP 0002.scaffold00003 1305954 1 A C scaffold3623 Both SNP 0002.scaffold00003 1306015 1 G T scaffold3623 Both SNP 0002.scaffold00003 1306022 1 T C scaffold3623 ScafM SNP 0002.scaffold00003 1306048 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1306052 1 A T scaffold3623 ScafM SNP 0002.scaffold00003 1306097 1 A G scaffold3623 ScafM INDEL 0002.scaffold00003 1306109 1 A . scaffold3623 ReadM SNP 0002.scaffold00003 1306211 1 C T - ReadM SNP 0002.scaffold00003 1306285 1 G A - ReadM SNP 0002.scaffold00003 1306374 1 T A - ReadM SNP 0002.scaffold00003 1306441 1 T G - ReadM SNP 0002.scaffold00003 1306454 1 C T - ReadM SNP 0002.scaffold00003 1306461 1 T C - ReadM SNP 0002.scaffold00003 1306506 1 T A - ReadM SNP 0002.scaffold00003 1306536 1 T G - ReadM SNP 0002.scaffold00003 1306560 1 A G - ScafM INDEL 0002.scaffold00003 1306612 1 . T scaffold3623 ScafM SNP 0002.scaffold00003 1306617 1 C G scaffold3623 Both SNP 0002.scaffold00003 1306789 1 C T scaffold3623 Both SNP 0002.scaffold00003 1306861 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1306973 2 CA TG scaffold3623 Both SNP 0002.scaffold00003 1307055 1 A G scaffold3623 Both SNP 0002.scaffold00003 1307115 1 C A scaffold3623 Both SNP 0002.scaffold00003 1307141 1 A G scaffold3623 ScafM INDEL 0002.scaffold00003 1307186 1 . C scaffold3623 ScafM SNP 0002.scaffold00003 1307188 1 G A scaffold3623 ScafM SNP 0002.scaffold00003 1307216 1 C T scaffold3623 ScafM SNP 0002.scaffold00003 1307237 1 G C scaffold3623 ReadM SNP 0002.scaffold00003 1307256 1 A T - ScafM SNP 0002.scaffold00003 1307844 1 C G scaffold3623 ScafM SNP 0002.scaffold00003 1307884 1 T A scaffold3623 ScafM INDEL 0002.scaffold00003 1307888 2 .. AC scaffold3623 ScafM INDEL 0002.scaffold00003 1307925 4 GGAA .... scaffold3623 ScafM SNP 0002.scaffold00003 1307960 1 A T scaffold3623 ReadM SNP 0002.scaffold00003 1308297 1 T C - ReadM SNP 0002.scaffold00003 1308543 1 G A - ReadM SNP 0002.scaffold00003 1308549 1 A G - ReadM SNP 0002.scaffold00003 1308895 1 A G - ReadM SNP 0002.scaffold00003 1308931 1 G T - ReadM SNP 0002.scaffold00003 1308933 1 G A - ReadM SNP 0002.scaffold00003 1309161 1 C G - ReadM SNP 0002.scaffold00003 1309324 1 C T - ReadM SNP 0002.scaffold00003 1310177 1 G A - ReadM SNP 0002.scaffold00003 1310235 1 C T - ReadM SNP 0002.scaffold00003 1310247 1 T C - ReadM SNP 0002.scaffold00003 1310283 1 A C - ReadM SNP 0002.scaffold00003 1310325 1 G T - ReadM SNP 0002.scaffold00003 1310470 1 C A - ReadM SNP 0002.scaffold00003 1310828 1 A C - ReadM SNP 0002.scaffold00003 1311080 1 T C - ReadM SNP 0002.scaffold00003 1311659 1 A G - ReadM SNP 0002.scaffold00003 1311928 1 A T - ReadM SNP 0002.scaffold00003 1311979 1 T C - ReadM SNP 0002.scaffold00003 1312059 1 T C - ReadM SNP 0002.scaffold00003 1312099 1 T C - ReadM SNP 0002.scaffold00003 1312114 1 A G - ReadM SNP 0002.scaffold00003 1312304 1 A G - ReadM SNP 0002.scaffold00003 1312313 1 C T - ReadM SNP 0002.scaffold00003 1312347 1 G A - ReadM SNP 0002.scaffold00003 1312376 1 T C - ReadM SNP 0002.scaffold00003 1312459 1 G A - ReadM SNP 0002.scaffold00003 1312473 1 C T - ReadM SNP 0002.scaffold00003 1312491 1 A G - ReadM SNP 0002.scaffold00003 1312752 1 C T - ReadM SNP 0002.scaffold00003 1312789 1 G T - ReadM SNP 0002.scaffold00003 1312821 1 A G - ReadM SNP 0002.scaffold00003 1312874 1 A G - ReadM SNP 0002.scaffold00003 1312903 1 A G - ReadM SNP 0002.scaffold00003 1313019 1 A G - ReadM SNP 0002.scaffold00003 1313023 1 A G - ReadM SNP 0002.scaffold00003 1313037 1 T C - ReadM SNP 0002.scaffold00003 1313099 1 G A - ReadM SNP 0002.scaffold00003 1313119 1 G A - ScafM SNP 0002.scaffold00003 1313611 1 G A scaffold9148 ScafM INDEL 0002.scaffold00003 1313659 4 .... GTGT scaffold9148 ScafM SNP 0002.scaffold00003 1313677 1 T A scaffold9148 ScafM INDEL 0002.scaffold00003 1313716 1 G . scaffold9148 ScafM SNP 0002.scaffold00003 1313731 1 T G scaffold9148 ScafM SNP 0002.scaffold00003 1313758 1 T G scaffold9148 Both SNP 0002.scaffold00003 1314184 1 A T scaffold9148 Both SNP 0002.scaffold00003 1314317 1 A C scaffold9148 Both SNP 0002.scaffold00003 1314778 1 T C scaffold9148 Both SNP 0002.scaffold00003 1314809 1 G A scaffold9148 ReadM SNP 0002.scaffold00003 1315270 1 C A - Both SNP 0002.scaffold00003 1315459 1 A G scaffold9148 Both SNP 0002.scaffold00003 1315572 1 T C scaffold9148 Both SNP 0002.scaffold00003 1315625 1 T A scaffold9148 Both SNP 0002.scaffold00003 1316088 1 A C scaffold9148 Both SNP 0002.scaffold00003 1316217 1 A G scaffold9148 Both INDEL 0002.scaffold00003 1316351 1 A . scaffold9148 ReadM SNP 0002.scaffold00003 1316520 1 C T - ReadM SNP 0002.scaffold00003 1316561 1 C T - Both SNP 0002.scaffold00003 1316621 1 T G scaffold9148 Both SNP 0002.scaffold00003 1316794 1 G A scaffold9148 ScafM SNP 0002.scaffold00003 1317161 1 T A scaffold9148 Both SNP 0002.scaffold00003 1317217 1 G A scaffold9148 Both SNP 0002.scaffold00003 1317385 1 C T scaffold9148 Both SNP 0002.scaffold00003 1317547 1 A G scaffold9148 Both SNP 0002.scaffold00003 1317881 1 G T scaffold9148 Both SNP 0002.scaffold00003 1318063 1 C T scaffold9148 ScafM SNP 0002.scaffold00003 1318155 1 T A scaffold9148 ScafM INDEL 0002.scaffold00003 1318189 3 TTT ... scaffold9148 Both SNP 0002.scaffold00003 1318234 1 T A scaffold9148 Both SNP 0002.scaffold00003 1318436 1 G A scaffold9148 Both SNP 0002.scaffold00003 1318444 1 G A scaffold9148 Both SNP 0002.scaffold00003 1318579 1 G A scaffold9148 ScafM SNP 0002.scaffold00003 1318641 1 C A scaffold9148 ScafM SNP 0002.scaffold00003 1318669 1 C T scaffold9148 Both SNP 0002.scaffold00003 1319046 1 G A scaffold9148 ScafM SNP 0002.scaffold00003 1319461 1 C G scaffold9148 ScafM INDEL 0002.scaffold00003 1319477 11 ........... TTTTTTTTGGG scaffold9148 ScafM INDEL 0002.scaffold00003 1319478 40 ........................................ TTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold9148 Both SNP 0002.scaffold00003 1319623 1 T A scaffold9148 Both SNP 0002.scaffold00003 1320349 1 T A scaffold9148 ReadM SNP 0002.scaffold00003 1320524 1 G A - ReadM SNP 0002.scaffold00003 1320567 1 T C - ReadM SNP 0002.scaffold00003 1320573 1 T G - ReadM INDEL 0002.scaffold00003 1320638 1 T . - ReadM SNP 0002.scaffold00003 1320657 1 A T - Both SNP 0002.scaffold00003 1320825 1 T C scaffold9148 Both SNP 0002.scaffold00003 1321114 1 G A scaffold9148 Both INDEL 0002.scaffold00003 1321116 1 . T scaffold9148 ScafM INDEL 0002.scaffold00003 1321127 1 . T scaffold9148 Both SNP 0002.scaffold00003 1321300 1 T A scaffold9148 ScafM SNP 0002.scaffold00003 1321345 1 G T scaffold9148 Both SNP 0002.scaffold00003 1321362 1 T C scaffold9148 Both SNP 0002.scaffold00003 1321478 1 T C scaffold9148 Both SNP 0002.scaffold00003 1321532 1 G A scaffold9148 Both SNP 0002.scaffold00003 1321808 1 C G scaffold9148 Both SNP 0002.scaffold00003 1321889 1 C G scaffold9148 Both SNP 0002.scaffold00003 1321981 1 A T scaffold9148 Both SNP 0002.scaffold00003 1322219 1 G A scaffold9148 Both SNP 0002.scaffold00003 1322287 1 T A scaffold9148 Both SNP 0002.scaffold00003 1322781 1 G A scaffold9148 ScafM INDEL 0002.scaffold00003 1323381 1 T . scaffold9148 ReadM INDEL 0002.scaffold00003 1323632 1 A . - ReadM SNP 0002.scaffold00003 1323656 1 A G - ReadM SNP 0002.scaffold00003 1323875 1 C T - ReadM SNP 0002.scaffold00003 1323898 1 C T - ReadM SNP 0002.scaffold00003 1323993 1 T A - ReadM SNP 0002.scaffold00003 1324035 1 C T - ReadM SNP 0002.scaffold00003 1324050 1 C T - ReadM SNP 0002.scaffold00003 1324076 1 C G - ReadM SNP 0002.scaffold00003 1324167 1 C T - ReadM SNP 0002.scaffold00003 1324211 1 G A - ReadM SNP 0002.scaffold00003 1324848 1 T C - ReadM SNP 0002.scaffold00003 1324864 1 A G - ReadM SNP 0002.scaffold00003 1324968 1 C G - ReadM INDEL 0002.scaffold00003 1325104 2 .. AT - ReadM SNP 0002.scaffold00003 1325387 1 A G - ReadM SNP 0002.scaffold00003 1325479 1 T C - ReadM SNP 0002.scaffold00003 1325555 1 A C - ReadM SNP 0002.scaffold00003 1325691 1 T C - ReadM SNP 0002.scaffold00003 1325703 1 C G - ReadM SNP 0002.scaffold00003 1325710 1 G C - ReadM SNP 0002.scaffold00003 1325775 1 C T - ScafM SNP 0002.scaffold00003 1325866 1 T C scaffold9148 ScafM SNP 0002.scaffold00003 1325883 1 A G scaffold9148 ScafM SNP 0002.scaffold00003 1325894 1 C A scaffold9148 ScafM INDEL 0002.scaffold00003 1326001 1 T . scaffold9148 ReadM SNP 0002.scaffold00003 1326524 1 G A - ReadM SNP 0002.scaffold00003 1326567 1 G T - ReadM SNP 0002.scaffold00003 1326757 1 C G - ScafM SNP 0002.scaffold00003 1327074 1 T A scaffold9148 Both SNP 0002.scaffold00003 1327221 1 G C scaffold9148 ScafM SNP 0002.scaffold00003 1327283 1 C T scaffold9148 ReadM SNP 0002.scaffold00003 1327719 1 G A - ReadM SNP 0002.scaffold00003 1327738 1 T C - Both SNP 0002.scaffold00003 1327948 1 A T scaffold9148 Both SNP 0002.scaffold00003 1328275 1 T C scaffold9148 Both SNP 0002.scaffold00003 1328285 1 T C scaffold9148 Both SNP 0002.scaffold00003 1328404 1 T C scaffold9148 Both SNP 0002.scaffold00003 1328409 1 T G scaffold9148 ReadM SNP 0002.scaffold00003 1328541 1 T C - ReadM SNP 0002.scaffold00003 1328675 1 T G - ReadM SNP 0002.scaffold00003 1329092 1 T C - ReadM INDEL 0002.scaffold00003 1329149 1 A . - ReadM SNP 0002.scaffold00003 1329278 1 A G - ReadM INDEL 0002.scaffold00003 1329307 1 . G - ReadM INDEL 0002.scaffold00003 1329579 1 G . - ReadM SNP 0002.scaffold00003 1329661 1 C T - ReadM SNP 0002.scaffold00003 1329673 1 A G - ReadM SNP 0002.scaffold00003 1329772 1 A C - ReadM SNP 0002.scaffold00003 1329830 1 T A - Both SNP 0002.scaffold00003 1329928 1 T C scaffold9148 Both SNP 0002.scaffold00003 1329993 1 G A scaffold9148 Both SNP 0002.scaffold00003 1330008 1 C A scaffold9148 Both SNP 0002.scaffold00003 1330114 1 T G scaffold9148 Both SNP 0002.scaffold00003 1330250 1 C T scaffold9148 ScafM SNP 0002.scaffold00003 1330373 2 AG TA scaffold9148 Both SNP 0002.scaffold00003 1330382 1 G T scaffold9148 Both SNP 0002.scaffold00003 1330565 1 T G scaffold9148 Both SNP 0002.scaffold00003 1330574 1 G C scaffold9148 Both SNP 0002.scaffold00003 1330706 1 A T scaffold9148 Both SNP 0002.scaffold00003 1330748 1 A C scaffold9148 Both SNP 0002.scaffold00003 1330796 1 G A scaffold9148 Both SNP 0002.scaffold00003 1330902 1 A C scaffold9148 Both SNP 0002.scaffold00003 1331103 1 G A scaffold9148 Both SNP 0002.scaffold00003 1331124 1 C G scaffold9148 Both SNP 0002.scaffold00003 1331141 1 T C scaffold9148 Both SNP 0002.scaffold00003 1331336 1 C T scaffold9148 ScafM SNP 0002.scaffold00003 1331360 1 A T scaffold9148 ScafM INDEL 0002.scaffold00003 1331364 4 CGCT .... scaffold9148 Both SNP 0002.scaffold00003 1331396 1 G A scaffold9148 Both SNP 0002.scaffold00003 1331403 1 T G scaffold9148 Both SNP 0002.scaffold00003 1331426 1 A G scaffold9148 Both SNP 0002.scaffold00003 1331493 1 C T scaffold9148 Both SNP 0002.scaffold00003 1331585 1 T C scaffold9148 ScafM SNP 0002.scaffold00003 1331606 1 T C scaffold9148 ScafM SNP 0002.scaffold00003 1331615 1 T C scaffold9148 ScafM SNP 0002.scaffold00003 1331630 1 T G scaffold9148 ScafM SNP 0002.scaffold00003 1331652 1 G C scaffold9148 Both SNP 0002.scaffold00003 1331678 1 G T scaffold9148 Both SNP 0002.scaffold00003 1331682 1 C G scaffold9148 ReadM SNP 0002.scaffold00003 1331713 1 T C - ReadM SNP 0002.scaffold00003 1331908 1 T C - ReadM SNP 0002.scaffold00003 1331950 1 C T - ReadM SNP 0002.scaffold00003 1332117 1 C T - ReadM SNP 0002.scaffold00003 1332335 1 T G - ReadM SNP 0002.scaffold00003 1332390 1 G T - ReadM SNP 0002.scaffold00003 1332472 1 T C - ReadM SNP 0002.scaffold00003 1332518 1 A G - ReadM SNP 0002.scaffold00003 1332535 1 G T - ReadM SNP 0002.scaffold00003 1332559 1 A G - ReadM SNP 0002.scaffold00003 1332575 1 G A - ReadM SNP 0002.scaffold00003 1332798 1 C T - ReadM SNP 0002.scaffold00003 1332877 1 T C - ReadM SNP 0002.scaffold00003 1333079 1 A G - ReadM SNP 0002.scaffold00003 1333118 1 C T - ReadM SNP 0002.scaffold00003 1333179 1 A G - ReadM SNP 0002.scaffold00003 1333184 1 G T - ReadM SNP 0002.scaffold00003 1333216 1 C T - ReadM SNP 0002.scaffold00003 1333396 1 T G - ReadM SNP 0002.scaffold00003 1333420 1 T C - ReadM SNP 0002.scaffold00003 1333475 1 C T - ReadM SNP 0002.scaffold00003 1333495 1 C T - ReadM SNP 0002.scaffold00003 1333564 1 C T - ReadM SNP 0002.scaffold00003 1333605 1 A G - ReadM SNP 0002.scaffold00003 1333707 1 C T - ReadM SNP 0002.scaffold00003 1333782 1 C T - ReadM SNP 0002.scaffold00003 1333784 1 G A - ReadM SNP 0002.scaffold00003 1333839 1 C A - ReadM SNP 0002.scaffold00003 1333914 1 C T - ReadM SNP 0002.scaffold00003 1333928 1 A C - ReadM SNP 0002.scaffold00003 1333937 1 G T - ReadM SNP 0002.scaffold00003 1333993 1 A G - ReadM SNP 0002.scaffold00003 1334087 1 C A - ReadM SNP 0002.scaffold00003 1334166 1 C T - ReadM SNP 0002.scaffold00003 1334189 1 G T - ReadM SNP 0002.scaffold00003 1334223 1 A G - ReadM SNP 0002.scaffold00003 1334378 1 A G - ReadM SNP 0002.scaffold00003 1334468 1 T C - ReadM SNP 0002.scaffold00003 1334544 1 T C - Both SNP 0002.scaffold00003 1334705 1 T G scaffold9148 Both SNP 0002.scaffold00003 1334815 1 C A scaffold9148 Both SNP 0002.scaffold00003 1334860 1 G T scaffold9148 Both SNP 0002.scaffold00003 1334936 1 T G scaffold9148 Both SNP 0002.scaffold00003 1334999 1 C A scaffold9148 ReadM SNP 0002.scaffold00003 1335127 1 A T - ScafM SNP 0002.scaffold00003 1335365 1 T C scaffold9148 ScafM SNP 0002.scaffold00003 1335369 1 A G scaffold9148 ScafM SNP 0002.scaffold00003 1335401 1 T G scaffold9148 ScafM SNP 0002.scaffold00003 1335406 1 T G scaffold9148 ScafM SNP 0002.scaffold00003 1335500 1 A T scaffold9148 ReadM SNP 0002.scaffold00003 1351785 1 C G - ReadM SNP 0002.scaffold00003 1351803 1 T C - ReadM INDEL 0002.scaffold00003 1351883 1 G . - ReadM SNP 0002.scaffold00003 1351908 1 G A - ReadM SNP 0002.scaffold00003 1351995 1 A G - ReadM SNP 0002.scaffold00003 1352224 1 A T - ReadM SNP 0002.scaffold00003 1352368 1 A C - ReadM INDEL 0002.scaffold00003 1352377 1 T . - ReadM SNP 0002.scaffold00003 1352393 1 G A - ReadM SNP 0002.scaffold00003 1352488 1 C T - ReadM SNP 0002.scaffold00003 1352495 1 C T - ReadM SNP 0002.scaffold00003 1352499 1 C T - ReadM SNP 0002.scaffold00003 1352567 1 A G - ReadM SNP 0002.scaffold00003 1352616 1 C G - ReadM SNP 0002.scaffold00003 1352800 1 T C - ReadM SNP 0002.scaffold00003 1352802 1 A G - ReadM SNP 0002.scaffold00003 1352867 1 C T - ReadM SNP 0002.scaffold00003 1352978 1 T C - ReadM SNP 0002.scaffold00003 1359423 1 T A - ReadM SNP 0002.scaffold00003 1359487 1 A T - ReadM SNP 0002.scaffold00003 1359719 1 G A - ReadM SNP 0002.scaffold00003 1359732 1 C T - ReadM INDEL 0002.scaffold00003 1359847 1 . G - ReadM SNP 0002.scaffold00003 1359868 1 G A - ReadM SNP 0002.scaffold00003 1359885 1 A G - ReadM SNP 0002.scaffold00003 1359966 1 A C - Both SNP 0002.scaffold00003 1360104 1 C T scaffold6946 Both SNP 0002.scaffold00003 1360167 1 T C scaffold6946 Both SNP 0002.scaffold00003 1360260 1 C A scaffold6946 Both SNP 0002.scaffold00003 1360282 1 C T scaffold6946 Both SNP 0002.scaffold00003 1360385 1 G T scaffold6946 Both SNP 0002.scaffold00003 1360439 1 G T scaffold6946 Both SNP 0002.scaffold00003 1360539 1 A T scaffold6946 ScafM SNP 0002.scaffold00003 1360558 1 T A scaffold6946 ReadM SNP 0002.scaffold00003 1360679 1 T C - ReadM SNP 0002.scaffold00003 1360682 1 C T - Both SNP 0002.scaffold00003 1360838 1 G A scaffold6946 Both SNP 0002.scaffold00003 1361083 1 C T scaffold6946 ScafM SNP 0002.scaffold00003 1361334 2 CT TG scaffold6946 ScafM SNP 0002.scaffold00003 1361393 1 G T scaffold6946 Both SNP 0002.scaffold00003 1361448 1 T A scaffold6946 Both SNP 0002.scaffold00003 1361702 1 C T scaffold6946 Both SNP 0002.scaffold00003 1361746 1 T G scaffold6946 Both SNP 0002.scaffold00003 1361759 1 C T scaffold6946 ScafM INDEL 0002.scaffold00003 1361776 3 CGC ... scaffold6946 Both SNP 0002.scaffold00003 1361877 1 G C scaffold6946 Both SNP 0002.scaffold00003 1362081 1 T C scaffold6946 Both SNP 0002.scaffold00003 1362183 1 G T scaffold6946 Both SNP 0002.scaffold00003 1362306 1 C T scaffold6946 Both SNP 0002.scaffold00003 1362350 1 T C scaffold6946 Both SNP 0002.scaffold00003 1362460 1 A G scaffold6946 Both SNP 0002.scaffold00003 1362524 1 A G scaffold6946 Both SNP 0002.scaffold00003 1362788 1 G A scaffold6946 Both SNP 0002.scaffold00003 1362807 1 T C scaffold6946 ReadM SNP 0002.scaffold00003 1363386 1 C A - ReadM SNP 0002.scaffold00003 1363393 1 C G - ReadM SNP 0002.scaffold00003 1363476 1 G A - ReadM SNP 0002.scaffold00003 1363545 1 T G - ReadM SNP 0002.scaffold00003 1363672 1 C T - ReadM SNP 0002.scaffold00003 1363829 1 C A - ReadM SNP 0002.scaffold00003 1363848 1 A G - ReadM SNP 0002.scaffold00003 1363858 1 C T - ReadM SNP 0002.scaffold00003 1363954 1 A G - Both SNP 0002.scaffold00003 1364138 1 G A scaffold6946 ReadM SNP 0002.scaffold00003 1364249 1 C T - ScafM INDEL 0002.scaffold00003 1364413 3 TAT ... scaffold6946 ScafM SNP 0002.scaffold00003 1364429 1 C A scaffold6946 ScafM SNP 0002.scaffold00003 1364501 1 G A scaffold6946 ScafM SNP 0002.scaffold00003 1364524 1 C G scaffold6946 ScafM SNP 0002.scaffold00003 1364543 1 T C scaffold6946 ScafM SNP 0002.scaffold00003 1364552 1 T C scaffold6946 ScafM SNP 0002.scaffold00003 1364557 1 A C scaffold6946 ReadM SNP 0002.scaffold00003 1364608 1 A G - ReadM SNP 0002.scaffold00003 1364662 1 G A - ReadM SNP 0002.scaffold00003 1364751 1 T G - ReadM SNP 0002.scaffold00003 1364756 1 A G - ReadM SNP 0002.scaffold00003 1364772 1 C G - ReadM SNP 0002.scaffold00003 1364949 1 T A - ReadM SNP 0002.scaffold00003 1364964 1 G A - ReadM SNP 0002.scaffold00003 1365097 1 A G - ReadM INDEL 0002.scaffold00003 1365192 1 . A - ReadM SNP 0002.scaffold00003 1365319 1 A G - ReadM SNP 0002.scaffold00003 1365330 1 C T - ReadM SNP 0002.scaffold00003 1365443 1 G A - ReadM SNP 0002.scaffold00003 1365458 1 G C - ReadM SNP 0002.scaffold00003 1365465 1 G A - ReadM SNP 0002.scaffold00003 1365538 1 T G - ReadM SNP 0002.scaffold00003 1365542 1 G C - ReadM SNP 0002.scaffold00003 1365615 1 T C - ReadM SNP 0002.scaffold00003 1365618 1 G T - ReadM SNP 0002.scaffold00003 1365684 1 G A - ReadM SNP 0002.scaffold00003 1365718 1 T G - ReadM SNP 0002.scaffold00003 1365881 1 T C - ReadM SNP 0002.scaffold00003 1365989 1 G T - ReadM SNP 0002.scaffold00003 1366031 1 C T - ReadM SNP 0002.scaffold00003 1366119 1 T A - ReadM SNP 0002.scaffold00003 1366195 1 G C - ReadM SNP 0002.scaffold00003 1366298 1 C T - ReadM SNP 0002.scaffold00003 1366302 1 G A - ReadM SNP 0002.scaffold00003 1366337 1 C T - ReadM SNP 0002.scaffold00003 1366603 1 G T - Both SNP 0002.scaffold00003 1366625 1 C T scaffold6946 Both SNP 0002.scaffold00003 1366645 1 T C scaffold6946 Both SNP 0002.scaffold00003 1366669 1 T C scaffold6946 Both SNP 0002.scaffold00003 1366693 1 C A scaffold6946 Both SNP 0002.scaffold00003 1366751 1 C T scaffold6946 Both SNP 0002.scaffold00003 1366757 1 C G scaffold6946 ReadM SNP 0002.scaffold00003 1366814 1 G A - ReadM SNP 0002.scaffold00003 1366936 1 C A - Both SNP 0002.scaffold00003 1367033 1 T A scaffold6946 Both INDEL 0002.scaffold00003 1367168 1 . A scaffold6946 ScafM INDEL 0002.scaffold00003 1367277 3 ATT ... scaffold6946 Both SNP 0002.scaffold00003 1367383 1 T G scaffold6946 Both SNP 0002.scaffold00003 1367391 1 G A scaffold6946 Both SNP 0002.scaffold00003 1367394 1 T A scaffold6946 Both SNP 0002.scaffold00003 1367638 1 T G scaffold6946 Both SNP 0002.scaffold00003 1367640 1 C T scaffold6946 Both SNP 0002.scaffold00003 1367685 1 A C scaffold6946 Both SNP 0002.scaffold00003 1367712 1 A G scaffold6946 ReadM SNP 0002.scaffold00003 1367831 1 C T - ReadM SNP 0002.scaffold00003 1367893 1 C G - ReadM SNP 0002.scaffold00003 1367954 1 A C - ReadM SNP 0002.scaffold00003 1368060 1 A T - ReadM SNP 0002.scaffold00003 1368066 1 C T - ReadM SNP 0002.scaffold00003 1368113 1 T C - ReadM SNP 0002.scaffold00003 1368144 1 C T - ReadM SNP 0002.scaffold00003 1368147 1 G A - Both SNP 0002.scaffold00003 1368434 1 T G scaffold6946 Both SNP 0002.scaffold00003 1368478 1 C A scaffold6946 ReadM SNP 0002.scaffold00003 1368970 1 A G - ReadM SNP 0002.scaffold00003 1369030 1 T A - ReadM SNP 0002.scaffold00003 1369058 1 C A - ReadM INDEL 0002.scaffold00003 1369060 1 . A - ReadM SNP 0002.scaffold00003 1369089 1 A T - ReadM SNP 0002.scaffold00003 1369109 1 T G - ReadM SNP 0002.scaffold00003 1369173 1 G C - ReadM SNP 0002.scaffold00003 1369241 1 G A - ReadM SNP 0002.scaffold00003 1369305 1 A G - ReadM SNP 0002.scaffold00003 1369314 1 G T - ReadM SNP 0002.scaffold00003 1369400 1 G A - ReadM INDEL 0002.scaffold00003 1369431 1 A . - Both SNP 0002.scaffold00003 1369504 1 G T scaffold6946 Both SNP 0002.scaffold00003 1369535 1 C T scaffold6946 Both SNP 0002.scaffold00003 1369537 1 A G scaffold6946 Both INDEL 0002.scaffold00003 1369542 1 . T scaffold6946 Both SNP 0002.scaffold00003 1369686 1 C T scaffold6946 ScafM SNP 0002.scaffold00003 1369711 1 A G scaffold6946 ScafM INDEL 0002.scaffold00003 1369731 22 CACGTAGGAAAATAGAGAATCA ...................... scaffold6946 ReadM SNP 0002.scaffold00003 1369800 1 A G - Both SNP 0002.scaffold00003 1370135 1 C T scaffold6946 Both SNP 0002.scaffold00003 1370206 1 C A scaffold6946 Both SNP 0002.scaffold00003 1370265 1 T C scaffold6946 Both SNP 0002.scaffold00003 1370342 1 A C scaffold6946 Both SNP 0002.scaffold00003 1370463 1 A G scaffold6946 Both SNP 0002.scaffold00003 1370738 1 G A scaffold6946 Both SNP 0002.scaffold00003 1371146 1 C T scaffold6946 Both SNP 0002.scaffold00003 1371349 1 A C scaffold6946 Both SNP 0002.scaffold00003 1371691 1 G C scaffold6946 ReadM SNP 0002.scaffold00003 1372155 1 C T - ReadM SNP 0002.scaffold00003 1372288 1 C T - ScafM INDEL 0002.scaffold00003 1372438 2 .G AA scaffold6946 ScafM SNP 0002.scaffold00003 1372522 1 T C scaffold6946 Both SNP 0002.scaffold00003 1372762 1 C T scaffold6946 Both SNP 0002.scaffold00003 1373035 1 A G scaffold6946 Both SNP 0002.scaffold00003 1373052 1 T C scaffold6946 Both SNP 0002.scaffold00003 1373174 1 T A scaffold6946 Both SNP 0002.scaffold00003 1373242 1 C A scaffold6946 Both SNP 0002.scaffold00003 1373255 1 C T scaffold6946 Both SNP 0002.scaffold00003 1373288 1 A T scaffold6946 Both SNP 0002.scaffold00003 1373329 1 T C scaffold6946 Both SNP 0002.scaffold00003 1373369 1 A T scaffold6946 ReadM INDEL 0002.scaffold00003 1373556 2 TT .. - ScafM INDEL 0002.scaffold00003 1373556 3 TTA ..G scaffold6946 Both SNP 0002.scaffold00003 1373726 1 G T scaffold6946 Both SNP 0002.scaffold00003 1373861 1 G T scaffold6946 Both SNP 0002.scaffold00003 1373945 1 C T scaffold6946 Both SNP 0002.scaffold00003 1374127 1 T C scaffold6946 Both SNP 0002.scaffold00003 1374212 1 A C scaffold6946 Both SNP 0002.scaffold00003 1374253 1 A G scaffold6946 ScafM SNP 0002.scaffold00003 1374359 1 A T scaffold6946 ScafM SNP 0002.scaffold00003 1374372 1 A G scaffold6946 ScafM SNP 0002.scaffold00003 1374379 2 GA AG scaffold6946 Both SNP 0002.scaffold00003 1374401 1 A G scaffold6946 Both SNP 0002.scaffold00003 1374445 1 A G scaffold6946 Both SNP 0002.scaffold00003 1374571 1 C T scaffold6946 Both SNP 0002.scaffold00003 1374652 1 A C scaffold6946 Both SNP 0002.scaffold00003 1374733 1 C T scaffold6946 Both SNP 0002.scaffold00003 1374741 1 A G scaffold6946 Both SNP 0002.scaffold00003 1374755 1 A T scaffold6946 ScafM SNP 0002.scaffold00003 1374777 1 T C scaffold6946 ScafM SNP 0002.scaffold00003 1374787 2 CC AA scaffold6946 ScafM SNP 0002.scaffold00003 1374878 1 G C scaffold6946 ScafM SNP 0002.scaffold00003 1374883 1 T A scaffold6946 Both SNP 0002.scaffold00003 1374888 1 T C scaffold6946 Both SNP 0002.scaffold00003 1374916 1 T C scaffold6946 Both SNP 0002.scaffold00003 1375255 1 G A scaffold6946 Both SNP 0002.scaffold00003 1375265 1 T G scaffold6946 Both SNP 0002.scaffold00003 1375285 1 C T scaffold6946 Both INDEL 0002.scaffold00003 1375293 1 A . scaffold6946 Both SNP 0002.scaffold00003 1375328 1 G C scaffold6946 Both SNP 0002.scaffold00003 1375392 1 G A scaffold6946 Both SNP 0002.scaffold00003 1375529 1 C A scaffold6946 Both SNP 0002.scaffold00003 1375763 1 G A scaffold6946 Both SNP 0002.scaffold00003 1375781 1 G A scaffold6946 ReadM INDEL 0002.scaffold00003 1376006 3 ATG ... - ScafM SNP 0002.scaffold00003 1376092 2 AG TA scaffold6946 ScafM INDEL 0002.scaffold00003 1376276 8 AATGTGGA ........ scaffold6946 ScafM INDEL 0002.scaffold00003 1376287 1 T . scaffold6946 ScafM INDEL 0002.scaffold00003 1376294 1 . T scaffold6946 ScafM INDEL 0002.scaffold00003 1376316 8 ........ TGCCTTTC scaffold6946 ReadM SNP 0002.scaffold00003 1376382 1 C T - ReadM SNP 0002.scaffold00003 1376567 1 G A - ReadM SNP 0002.scaffold00003 1376639 1 C A - ReadM SNP 0002.scaffold00003 1376641 1 C A - ReadM SNP 0002.scaffold00003 1376647 1 A T - ReadM SNP 0002.scaffold00003 1376712 1 T G - ReadM SNP 0002.scaffold00003 1376728 1 A G - ReadM SNP 0002.scaffold00003 1376747 1 G A - ReadM INDEL 0002.scaffold00003 1376822 1 . A - Both SNP 0002.scaffold00003 1376840 1 A T scaffold6946 Both SNP 0002.scaffold00003 1376893 1 G C scaffold6946 Both INDEL 0002.scaffold00003 1376960 1 . C scaffold6946 Both SNP 0002.scaffold00003 1377049 1 T A scaffold6946 ReadM SNP 0002.scaffold00003 1377055 1 G T - ReadM SNP 0002.scaffold00003 1377078 1 T C - ReadM SNP 0002.scaffold00003 1377183 1 A T - ReadM SNP 0002.scaffold00003 1377225 1 C T - ScafM SNP 0002.scaffold00003 1377257 1 A T scaffold6946 ScafM INDEL 0002.scaffold00003 1377298 1 . G scaffold6946 ScafM SNP 0002.scaffold00003 1377314 1 G T scaffold6946 ScafM SNP 0002.scaffold00003 1377345 1 A G scaffold6946 ScafM SNP 0002.scaffold00003 1377355 1 C T scaffold6946 ScafM SNP 0002.scaffold00003 1377429 1 G C scaffold6946 ScafM SNP 0002.scaffold00003 1377447 1 T C scaffold6946 ReadM INDEL 0002.scaffold00003 1389466 1 . G - Both SNP 0002.scaffold00003 1389581 1 A G scaffold6946 Both SNP 0002.scaffold00003 1389614 1 G A scaffold6946 Both SNP 0002.scaffold00003 1389631 1 A G scaffold6946 Both SNP 0002.scaffold00003 1389746 1 C T scaffold6946 Both SNP 0002.scaffold00003 1389803 1 T A scaffold6946 Both INDEL 0002.scaffold00003 1389901 2 AG .. scaffold6946 ReadM SNP 0002.scaffold00003 1389937 1 G C - ReadM SNP 0002.scaffold00003 1389975 1 C A - ReadM INDEL 0002.scaffold00003 1390096 1 . G - ReadM SNP 0002.scaffold00003 1390123 1 A C - ReadM INDEL 0002.scaffold00003 1390287 1 A . - ScafM SNP 0002.scaffold00003 1390453 1 C T scaffold6946 ScafM SNP 0002.scaffold00003 1390479 1 G T scaffold6946 ScafM INDEL 0002.scaffold00003 1390552 1 T . scaffold6946 ScafM SNP 0002.scaffold00003 1390985 1 T A scaffold6946 ScafM SNP 0002.scaffold00003 1391049 1 T C scaffold6946 ScafM SNP 0002.scaffold00003 1391057 1 G A scaffold6946 ScafM SNP 0002.scaffold00003 1391355 1 T A scaffold6946 ScafM SNP 0002.scaffold00003 1391360 1 G C scaffold6946 ScafM SNP 0002.scaffold00003 1391376 1 A C scaffold6946 ScafM SNP 0002.scaffold00003 1391922 1 T C scaffold23427 Both INDEL 0002.scaffold00003 1392043 1 . G scaffold23427 Both SNP 0002.scaffold00003 1392056 1 T G scaffold23427 ScafM SNP 0002.scaffold00003 1392136 2 AT GC scaffold23427 ScafM SNP 0002.scaffold00003 1392157 1 G A scaffold23427 ScafM INDEL 0002.scaffold00003 1392245 2 AA .. scaffold23427 ScafM INDEL 0002.scaffold00003 1392249 2 AA .T scaffold23427 Both SNP 0002.scaffold00003 1392338 1 T G scaffold23427 Both SNP 0002.scaffold00003 1392353 1 C T scaffold23427 Both SNP 0002.scaffold00003 1392407 1 C T scaffold23427 Both SNP 0002.scaffold00003 1392454 1 T C scaffold23427 Both SNP 0002.scaffold00003 1392495 1 A G scaffold23427 ScafM SNP 0002.scaffold00003 1392532 2 TG AT scaffold23427 Both SNP 0002.scaffold00003 1392967 1 T C scaffold23427 Both SNP 0002.scaffold00003 1392973 1 C T scaffold23427 Both SNP 0002.scaffold00003 1393060 1 G C scaffold23427 Both SNP 0002.scaffold00003 1393141 1 A G scaffold23427 Both INDEL 0002.scaffold00003 1393172 1 . T scaffold23427 ReadM SNP 0002.scaffold00003 1393246 1 G A - ReadM SNP 0002.scaffold00003 1393284 1 G A - ReadM SNP 0002.scaffold00003 1393324 1 A G - ReadM SNP 0002.scaffold00003 1393410 1 T C - ReadM SNP 0002.scaffold00003 1393427 1 A C - ReadM SNP 0002.scaffold00003 1393524 1 G A - Both SNP 0002.scaffold00003 1393549 1 T C scaffold23427 Both SNP 0002.scaffold00003 1393598 1 G A scaffold23427 Both SNP 0002.scaffold00003 1393686 1 G T scaffold23427 Both SNP 0002.scaffold00003 1393715 1 T C scaffold23427 ScafM INDEL 0002.scaffold00003 1393817 10 GGAATCAGTT .......... scaffold23427 ScafM SNP 0002.scaffold00003 1393949 1 T C scaffold23427 ScafM INDEL 0002.scaffold00003 1393950 5 ..... GGGCC scaffold23427 Both SNP 0002.scaffold00003 1394100 1 T A scaffold23427 Both SNP 0002.scaffold00003 1394179 1 C A scaffold23427 ReadM SNP 0002.scaffold00003 1394290 1 C A - ReadM SNP 0002.scaffold00003 1394330 1 G T - ReadM SNP 0002.scaffold00003 1394446 1 T G - ReadM SNP 0002.scaffold00003 1394544 1 C T - ReadM SNP 0002.scaffold00003 1394742 1 A G - ReadM SNP 0002.scaffold00003 1394768 1 T C - ReadM SNP 0002.scaffold00003 1394984 1 A C - ReadM SNP 0002.scaffold00003 1395134 1 G T - ReadM SNP 0002.scaffold00003 1395139 1 G C - ReadM SNP 0002.scaffold00003 1395203 1 T G - ReadM SNP 0002.scaffold00003 1395311 1 T C - ReadM SNP 0002.scaffold00003 1395612 1 T C - ReadM SNP 0002.scaffold00003 1395630 1 G A - ReadM SNP 0002.scaffold00003 1395637 1 A G - ReadM SNP 0002.scaffold00003 1395738 1 G A - ReadM SNP 0002.scaffold00003 1395907 1 G A - ReadM SNP 0002.scaffold00003 1396014 1 A G - ReadM SNP 0002.scaffold00003 1396018 1 G T - Both SNP 0002.scaffold00003 1396101 1 T G scaffold23427 Both SNP 0002.scaffold00003 1396158 1 A G scaffold23427 Both SNP 0002.scaffold00003 1396191 1 T C scaffold23427 ReadM SNP 0002.scaffold00003 1396234 1 G T - ReadM SNP 0002.scaffold00003 1396353 1 G A - ReadM SNP 0002.scaffold00003 1396378 1 G A - Both SNP 0002.scaffold00003 1396428 1 G T scaffold23427 Both SNP 0002.scaffold00003 1396492 1 C T scaffold23427 Both SNP 0002.scaffold00003 1396539 1 G A scaffold23427 Both SNP 0002.scaffold00003 1396579 1 C T scaffold23427 ScafM SNP 0002.scaffold00003 1396611 1 G T scaffold23427 Both SNP 0002.scaffold00003 1396618 1 A T scaffold23427 Both SNP 0002.scaffold00003 1396653 1 G A scaffold23427 Both SNP 0002.scaffold00003 1396759 1 G T scaffold23427 Both SNP 0002.scaffold00003 1396907 1 C G scaffold23427 ScafM SNP 0002.scaffold00003 1396942 1 T C scaffold23427 ScafM SNP 0002.scaffold00003 1396944 1 G A scaffold23427 Both SNP 0002.scaffold00003 1396968 1 C T scaffold23427 Both SNP 0002.scaffold00003 1396976 1 A G scaffold23427 Both SNP 0002.scaffold00003 1397028 1 T C scaffold23427 Both SNP 0002.scaffold00003 1397088 1 A C scaffold23427 ScafM SNP 0002.scaffold00003 1397197 2 CC TG scaffold23427 Both SNP 0002.scaffold00003 1397231 1 T C scaffold23427 Both SNP 0002.scaffold00003 1397267 1 C A scaffold23427 Both SNP 0002.scaffold00003 1397298 1 G A scaffold23427 Both SNP 0002.scaffold00003 1397335 1 C T scaffold23427 Both SNP 0002.scaffold00003 1397343 1 G A scaffold23427 Both SNP 0002.scaffold00003 1397474 1 G T scaffold23427 Both SNP 0002.scaffold00003 1397561 1 G C scaffold23427 ReadM SNP 0002.scaffold00003 1397616 1 G A - ReadM SNP 0002.scaffold00003 1397650 1 A C - ReadM SNP 0002.scaffold00003 1397664 1 A G - ReadM INDEL 0002.scaffold00003 1397673 1 . T - ReadM SNP 0002.scaffold00003 1397741 1 C T - ScafM SNP 0002.scaffold00003 1397914 1 A G scaffold23427 ScafM INDEL 0002.scaffold00003 1397921 4 .... CGCT scaffold23427 Both SNP 0002.scaffold00003 1397994 1 G A scaffold23427 Both SNP 0002.scaffold00003 1398115 1 T C scaffold23427 Both SNP 0002.scaffold00003 1398160 1 T C scaffold23427 ScafM SNP 0002.scaffold00003 1398200 1 T C scaffold23427 ReadM SNP 0002.scaffold00003 1398348 1 C T - ReadM INDEL 0002.scaffold00003 1398384 1 . A - ReadM INDEL 0002.scaffold00003 1398521 1 . T - ReadM SNP 0002.scaffold00003 1398601 1 A C - ReadM SNP 0002.scaffold00003 1398625 1 T C - ScafM SNP 0002.scaffold00003 1398765 1 A G scaffold23427 ScafM SNP 0002.scaffold00003 1398783 1 A T scaffold23427 ScafM INDEL 0002.scaffold00003 1398862 1 . A scaffold23427 ReadM SNP 0002.scaffold00003 1400276 1 G A - ScafM SNP 0002.scaffold00003 1400510 2 TT CA scaffold6259 ScafM SNP 0002.scaffold00003 1400561 1 A G scaffold6259 ScafM SNP 0002.scaffold00003 1400566 1 C A scaffold6259 ScafM SNP 0002.scaffold00003 1400576 2 TT AC scaffold6259 ScafM SNP 0002.scaffold00003 1400584 2 GA TT scaffold6259 ScafM SNP 0002.scaffold00003 1400601 1 A T scaffold6259 ScafM SNP 0002.scaffold00003 1400613 1 C T scaffold6259 Both SNP 0002.scaffold00003 1400617 1 T C scaffold6259 ReadM SNP 0002.scaffold00003 1400825 1 C T - ScafM SNP 0002.scaffold00003 1401281 2 GT AA scaffold31752 ScafM SNP 0002.scaffold00003 1403842 1 A G scaffold23427 ScafM SNP 0002.scaffold00003 1403947 1 G A scaffold23427 ReadM SNP 0002.scaffold00003 1404084 1 A G - ReadM SNP 0002.scaffold00003 1404135 1 A G - ReadM SNP 0002.scaffold00003 1404144 1 G C - ReadM SNP 0002.scaffold00003 1404204 1 G T - ReadM SNP 0002.scaffold00003 1404241 1 G A - ReadM SNP 0002.scaffold00003 1404330 1 A C - ReadM SNP 0002.scaffold00003 1404397 1 C A - ReadM SNP 0002.scaffold00003 1404437 1 A G - ReadM SNP 0002.scaffold00003 1404564 1 C T - ReadM SNP 0002.scaffold00003 1404721 1 A C - ReadM SNP 0002.scaffold00003 1404909 1 T G - ReadM SNP 0002.scaffold00003 1405001 1 A G - ReadM SNP 0002.scaffold00003 1405026 1 T C - ReadM INDEL 0002.scaffold00003 1405123 1 . C - ReadM SNP 0002.scaffold00003 1405161 1 C G - ReadM SNP 0002.scaffold00003 1405176 1 G A - ReadM SNP 0002.scaffold00003 1405199 1 A G - ReadM SNP 0002.scaffold00003 1405248 1 C T - ReadM SNP 0002.scaffold00003 1405251 1 C T - Both SNP 0002.scaffold00003 1405308 1 G A scaffold23427 ScafM SNP 0002.scaffold00003 1405355 1 A C scaffold23427 ScafM SNP 0002.scaffold00003 1405359 1 C A scaffold23427 ReadM SNP 0002.scaffold00003 1405664 1 C G - ReadM SNP 0002.scaffold00003 1405719 1 T G - ReadM SNP 0002.scaffold00003 1405758 1 C T - ReadM SNP 0002.scaffold00003 1405780 1 C A - ReadM SNP 0002.scaffold00003 1405803 1 T C - ReadM SNP 0002.scaffold00003 1405831 1 A C - ReadM SNP 0002.scaffold00003 1405902 1 A G - ReadM SNP 0002.scaffold00003 1405917 1 G A - ScafM SNP 0002.scaffold00003 1409601 1 C T scaffold23427 ScafM SNP 0002.scaffold00003 1409630 1 T C scaffold23427 ScafM INDEL 0002.scaffold00003 1409665 2 TT .. scaffold23427 ScafM SNP 0002.scaffold00003 1409683 1 C A scaffold23427 Both SNP 0002.scaffold00003 1409752 1 C T scaffold23427 Both SNP 0002.scaffold00003 1409818 1 C T scaffold23427 Both SNP 0002.scaffold00003 1409918 1 C A scaffold23427 Both SNP 0002.scaffold00003 1409967 1 T A scaffold23427 Both SNP 0002.scaffold00003 1410036 1 T C scaffold23427 Both SNP 0002.scaffold00003 1410064 1 T A scaffold23427 ScafM SNP 0002.scaffold00003 1410086 1 T A scaffold23427 ScafM SNP 0002.scaffold00003 1410088 1 C T scaffold23427 Both SNP 0002.scaffold00003 1410171 1 C A scaffold23427 Both INDEL 0002.scaffold00003 1410230 1 C . scaffold23427 Both SNP 0002.scaffold00003 1410243 1 G C scaffold23427 Both SNP 0002.scaffold00003 1410405 1 G A scaffold23427 Both SNP 0002.scaffold00003 1410476 1 T G scaffold23427 Both SNP 0002.scaffold00003 1410495 1 C A scaffold23427 Both SNP 0002.scaffold00003 1410561 1 A G scaffold23427 Both SNP 0002.scaffold00003 1410567 1 T C scaffold23427 Both SNP 0002.scaffold00003 1410593 1 C T scaffold23427 Both SNP 0002.scaffold00003 1410676 1 T G scaffold23427 Both SNP 0002.scaffold00003 1410691 1 A G scaffold23427 ScafM INDEL 0002.scaffold00003 1410718 7 ....... TTTCTAG scaffold23427 ScafM INDEL 0002.scaffold00003 1410719 6 ...... TGCGGC scaffold23427 ScafM INDEL 0002.scaffold00003 1410720 5 ..... GCCCC scaffold23427 ScafM INDEL 0002.scaffold00003 1410723 2 .. TG scaffold23427 Both SNP 0002.scaffold00003 1410773 1 T C scaffold23427 ScafM SNP 0002.scaffold00003 1410789 2 GC CT scaffold23427 Both SNP 0002.scaffold00003 1410942 1 T A scaffold23427 ReadM SNP 0002.scaffold00003 1411013 1 G T - ReadM SNP 0002.scaffold00003 1411055 1 A G - ReadM SNP 0002.scaffold00003 1411125 1 G A - ReadM SNP 0002.scaffold00003 1411140 1 A G - ReadM INDEL 0002.scaffold00003 1411185 1 T . - ReadM SNP 0002.scaffold00003 1411208 1 C A - ReadM SNP 0002.scaffold00003 1415441 1 G A - ReadM SNP 0002.scaffold00003 1415459 1 T A - ReadM SNP 0002.scaffold00003 1415499 1 G T - ReadM INDEL 0002.scaffold00003 1415769 1 . T - ReadM SNP 0002.scaffold00003 1416312 1 C G - ReadM SNP 0002.scaffold00003 1416316 1 T G - ReadM SNP 0002.scaffold00003 1416354 1 G T - ReadM SNP 0002.scaffold00003 1416504 1 A G - ReadM SNP 0002.scaffold00003 1416660 1 T G - ReadM INDEL 0002.scaffold00003 1416664 1 A . - ReadM SNP 0002.scaffold00003 1416794 1 A C - ReadM SNP 0002.scaffold00003 1416995 1 C T - ReadM SNP 0002.scaffold00003 1417133 1 A G - ReadM SNP 0002.scaffold00003 1417185 1 T G - ReadM SNP 0002.scaffold00003 1417190 1 C T - ReadM SNP 0002.scaffold00003 1417234 1 T C - ReadM SNP 0002.scaffold00003 1417348 1 C T - ReadM SNP 0002.scaffold00003 1417375 1 C T - ReadM SNP 0002.scaffold00003 1417414 1 C T - ReadM SNP 0002.scaffold00003 1417452 1 A G - ReadM SNP 0002.scaffold00003 1417509 1 A G - ReadM SNP 0002.scaffold00003 1417525 1 C A - ReadM SNP 0002.scaffold00003 1417550 1 G C - ReadM SNP 0002.scaffold00003 1417604 1 T C - ReadM INDEL 0002.scaffold00003 1417680 1 . C - ReadM SNP 0002.scaffold00003 1417828 1 A G - ReadM SNP 0002.scaffold00003 1417888 1 A G - ReadM SNP 0002.scaffold00003 1417900 1 T C - ReadM SNP 0002.scaffold00003 1418078 1 A G - ReadM SNP 0002.scaffold00003 1418316 1 G T - ReadM SNP 0002.scaffold00003 1418325 1 G A - ReadM SNP 0002.scaffold00003 1419503 1 C G - ReadM SNP 0002.scaffold00003 1419784 1 C T - ReadM SNP 0002.scaffold00003 1419899 1 A G - ReadM SNP 0002.scaffold00003 1419986 1 T C - ReadM SNP 0002.scaffold00003 1420332 1 C A - ReadM SNP 0002.scaffold00003 1420374 1 A G - ReadM SNP 0002.scaffold00003 1420391 1 G A - ReadM SNP 0002.scaffold00003 1420510 1 G A - ReadM SNP 0002.scaffold00003 1420531 1 T C - ReadM SNP 0002.scaffold00003 1420552 1 T A - ReadM SNP 0002.scaffold00003 1420618 1 C A - ReadM SNP 0002.scaffold00003 1420652 1 A T - ReadM SNP 0002.scaffold00003 1420799 1 A G - ReadM SNP 0002.scaffold00003 1420841 1 C G - ReadM SNP 0002.scaffold00003 1420851 1 A T - ReadM SNP 0002.scaffold00003 1420862 1 C T - ReadM SNP 0002.scaffold00003 1420915 1 T C - ReadM INDEL 0002.scaffold00003 1420985 1 . T - ReadM SNP 0002.scaffold00003 1421183 1 T A - ReadM SNP 0002.scaffold00003 1424099 1 A G - Both SNP 0002.scaffold00003 1424113 1 A G scaffold10877 Both SNP 0002.scaffold00003 1424135 1 A G scaffold10877 Both SNP 0002.scaffold00003 1424191 1 G A scaffold10877 Both SNP 0002.scaffold00003 1424215 1 T A scaffold10877 Both SNP 0002.scaffold00003 1424287 1 C T scaffold10877 Both SNP 0002.scaffold00003 1424292 1 C A scaffold10877 Both SNP 0002.scaffold00003 1424298 1 C T scaffold10877 ReadM SNP 0002.scaffold00003 1424381 1 A G - ReadM SNP 0002.scaffold00003 1424435 1 A G - ReadM SNP 0002.scaffold00003 1424512 1 T C - ReadM SNP 0002.scaffold00003 1424548 1 C T - ReadM SNP 0002.scaffold00003 1424559 1 T G - ReadM SNP 0002.scaffold00003 1424674 1 T C - ReadM SNP 0002.scaffold00003 1424691 1 A G - ReadM SNP 0002.scaffold00003 1424717 1 C G - ReadM SNP 0002.scaffold00003 1424770 1 G C - ReadM SNP 0002.scaffold00003 1424857 1 G C - ReadM SNP 0002.scaffold00003 1424979 1 C T - ReadM SNP 0002.scaffold00003 1424991 1 G C - ReadM SNP 0002.scaffold00003 1425024 1 A G - ReadM SNP 0002.scaffold00003 1425055 1 A G - ReadM SNP 0002.scaffold00003 1425104 1 T A - ReadM SNP 0002.scaffold00003 1425185 1 A G - ReadM SNP 0002.scaffold00003 1425217 1 T C - ReadM SNP 0002.scaffold00003 1425230 1 A T - ReadM SNP 0002.scaffold00003 1425304 1 G A - ReadM SNP 0002.scaffold00003 1425337 1 A G - ReadM SNP 0002.scaffold00003 1425356 1 G A - ReadM SNP 0002.scaffold00003 1425401 1 C T - ReadM SNP 0002.scaffold00003 1425405 1 G A - ReadM SNP 0002.scaffold00003 1425623 1 A C - ReadM SNP 0002.scaffold00003 1425673 1 C T - ReadM SNP 0002.scaffold00003 1425713 1 T C - ReadM SNP 0002.scaffold00003 1425758 1 C T - ReadM SNP 0002.scaffold00003 1425793 1 T G - ReadM SNP 0002.scaffold00003 1425799 1 C T - Both SNP 0002.scaffold00003 1425844 1 T C scaffold10877 Both SNP 0002.scaffold00003 1425875 1 C T scaffold10877 Both SNP 0002.scaffold00003 1425930 1 T G scaffold10877 Both SNP 0002.scaffold00003 1426008 1 G T scaffold10877 ScafM SNP 0002.scaffold00003 1426017 1 C T scaffold10877 ScafM SNP 0002.scaffold00003 1426421 1 C T scaffold10877 ReadM SNP 0002.scaffold00003 1426764 1 T C - ReadM SNP 0002.scaffold00003 1426837 1 A T - ReadM SNP 0002.scaffold00003 1426879 1 G A - ReadM SNP 0002.scaffold00003 1426898 1 A C - ReadM SNP 0002.scaffold00003 1426974 1 A G - ReadM SNP 0002.scaffold00003 1427005 1 C G - ReadM SNP 0002.scaffold00003 1427047 1 G A - ReadM SNP 0002.scaffold00003 1427093 1 C G - ReadM SNP 0002.scaffold00003 1427096 1 C T - ReadM SNP 0002.scaffold00003 1427144 1 C T - ReadM SNP 0002.scaffold00003 1427219 1 G A - ReadM SNP 0002.scaffold00003 1427248 1 G C - ReadM SNP 0002.scaffold00003 1427401 1 T C - ReadM SNP 0002.scaffold00003 1427434 1 T C - Both SNP 0002.scaffold00003 1427488 1 C T scaffold10877 Both SNP 0002.scaffold00003 1427515 1 G T scaffold10877 Both SNP 0002.scaffold00003 1427585 1 T C scaffold10877 Both SNP 0002.scaffold00003 1427604 1 G A scaffold10877 Both SNP 0002.scaffold00003 1427641 1 A G scaffold10877 Both SNP 0002.scaffold00003 1427703 1 T C scaffold10877 Both SNP 0002.scaffold00003 1427796 1 A T scaffold10877 Both SNP 0002.scaffold00003 1427804 1 G A scaffold10877 Both SNP 0002.scaffold00003 1427844 1 G A scaffold10877 ReadM SNP 0002.scaffold00003 1427915 1 C T - ReadM SNP 0002.scaffold00003 1427919 1 A G - ReadM SNP 0002.scaffold00003 1427927 1 T C - ReadM SNP 0002.scaffold00003 1427979 1 G A - Both SNP 0002.scaffold00003 1428028 1 A C scaffold10877 Both SNP 0002.scaffold00003 1428069 1 G A scaffold10877 Both SNP 0002.scaffold00003 1428099 1 C T scaffold10877 Both SNP 0002.scaffold00003 1428131 1 C G scaffold10877 Both SNP 0002.scaffold00003 1428158 1 C A scaffold10877 Both SNP 0002.scaffold00003 1428228 1 T C scaffold10877 ReadM SNP 0002.scaffold00003 1428235 1 C T - ReadM SNP 0002.scaffold00003 1428342 1 A G - ReadM SNP 0002.scaffold00003 1428369 1 C A - ReadM SNP 0002.scaffold00003 1428436 1 C T - ReadM SNP 0002.scaffold00003 1428718 1 T C - ReadM SNP 0002.scaffold00003 1428786 1 T G - ReadM SNP 0002.scaffold00003 1428807 1 G A - ReadM SNP 0002.scaffold00003 1428826 1 C A - ReadM SNP 0002.scaffold00003 1428949 1 C A - ReadM INDEL 0002.scaffold00003 1428986 1 A . - Both SNP 0002.scaffold00003 1429032 1 T G scaffold10877 Both SNP 0002.scaffold00003 1429057 1 T A scaffold10877 ReadM SNP 0002.scaffold00003 1429265 1 G A - Both SNP 0002.scaffold00003 1429595 1 A G scaffold10877 Both SNP 0002.scaffold00003 1429616 1 C A scaffold10877 Both SNP 0002.scaffold00003 1429656 1 T C scaffold10877 Both INDEL 0002.scaffold00003 1429728 1 . T scaffold10877 Both SNP 0002.scaffold00003 1429736 1 A T scaffold10877 Both SNP 0002.scaffold00003 1429878 1 C T scaffold10877 ScafM SNP 0002.scaffold00003 1429915 1 C T scaffold10877 Both SNP 0002.scaffold00003 1429934 1 C A scaffold10877 Both SNP 0002.scaffold00003 1429967 1 C T scaffold10877 Both SNP 0002.scaffold00003 1429997 1 C G scaffold10877 Both SNP 0002.scaffold00003 1430047 1 C G scaffold10877 Both SNP 0002.scaffold00003 1430119 1 G A scaffold10877 Both SNP 0002.scaffold00003 1430145 1 G A scaffold10877 Both SNP 0002.scaffold00003 1430215 1 C G scaffold10877 Both SNP 0002.scaffold00003 1430226 1 G T scaffold10877 Both SNP 0002.scaffold00003 1430256 1 A G scaffold10877 Both INDEL 0002.scaffold00003 1430286 1 G . scaffold10877 Both SNP 0002.scaffold00003 1430315 1 C T scaffold10877 Both SNP 0002.scaffold00003 1430353 1 A G scaffold10877 Both SNP 0002.scaffold00003 1430436 1 T A scaffold10877 Both SNP 0002.scaffold00003 1430445 1 T C scaffold10877 Both SNP 0002.scaffold00003 1430481 1 A G scaffold10877 Both SNP 0002.scaffold00003 1430486 1 G A scaffold10877 Both SNP 0002.scaffold00003 1430548 1 T C scaffold10877 Both SNP 0002.scaffold00003 1430572 1 A C scaffold10877 Both INDEL 0002.scaffold00003 1430720 1 T . scaffold10877 ScafM SNP 0002.scaffold00003 1430732 2 GT TC scaffold10877 Both SNP 0002.scaffold00003 1430803 1 T G scaffold10877 Both SNP 0002.scaffold00003 1430814 1 G A scaffold10877 Both SNP 0002.scaffold00003 1430833 1 A C scaffold10877 ScafM SNP 0002.scaffold00003 1430871 1 A G scaffold10877 Both SNP 0002.scaffold00003 1430950 1 T A scaffold10877 Both SNP 0002.scaffold00003 1431016 1 G A scaffold10877 ScafM SNP 0002.scaffold00003 1431054 1 A G scaffold10877 ScafM SNP 0002.scaffold00003 1431110 3 ATC TGG scaffold10877 ScafM INDEL 0002.scaffold00003 1431156 2 AC .. scaffold10877 ScafM SNP 0002.scaffold00003 1431285 1 A C scaffold10877 ScafM INDEL 0002.scaffold00003 1431313 1 G . scaffold10877 ScafM SNP 0002.scaffold00003 1431561 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1431604 1 A C scaffold1638 ScafM INDEL 0002.scaffold00003 1431609 1 A . scaffold1638 ScafM SNP 0002.scaffold00003 1431613 1 A T scaffold1638 ScafM SNP 0002.scaffold00003 1431646 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1431671 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1431689 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1431706 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1431716 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1431732 1 T C scaffold1638 Both SNP 0002.scaffold00003 1431760 1 G C scaffold1638 Both SNP 0002.scaffold00003 1431772 1 T C scaffold1638 Both SNP 0002.scaffold00003 1431853 1 T G scaffold1638 Both SNP 0002.scaffold00003 1431861 1 A C scaffold1638 Both SNP 0002.scaffold00003 1431864 1 A G scaffold1638 Both SNP 0002.scaffold00003 1431915 1 G A scaffold1638 Both SNP 0002.scaffold00003 1431972 1 A G scaffold1638 ReadM SNP 0002.scaffold00003 1432142 1 T C - ReadM SNP 0002.scaffold00003 1432192 1 G A - ReadM SNP 0002.scaffold00003 1432213 1 G A - ReadM SNP 0002.scaffold00003 1432218 1 G A - ReadM SNP 0002.scaffold00003 1432256 1 A G - ReadM SNP 0002.scaffold00003 1432278 1 G T - ReadM SNP 0002.scaffold00003 1432302 1 G A - ReadM SNP 0002.scaffold00003 1432341 1 C T - Both SNP 0002.scaffold00003 1432415 1 A G scaffold1638 Both SNP 0002.scaffold00003 1432456 1 G A scaffold1638 Both SNP 0002.scaffold00003 1432460 1 G T scaffold1638 Both SNP 0002.scaffold00003 1432491 1 A C scaffold1638 ReadM SNP 0002.scaffold00003 1432529 1 G T - ReadM SNP 0002.scaffold00003 1432534 1 A G - ReadM SNP 0002.scaffold00003 1432591 1 A G - ReadM SNP 0002.scaffold00003 1432616 1 G A - Both SNP 0002.scaffold00003 1432648 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1432754 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1432786 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1432793 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1432811 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1432820 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1432875 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1432885 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1432899 1 T A scaffold1638 ScafM SNP 0002.scaffold00003 1432933 1 G T scaffold1638 ScafM SNP 0002.scaffold00003 1432961 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1433014 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1433018 1 C G scaffold1638 ScafM SNP 0002.scaffold00003 1433020 2 GT TG scaffold1638 ScafM SNP 0002.scaffold00003 1433040 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1433056 2 CG TA scaffold1638 ReadM SNP 0002.scaffold00003 1434879 1 G T - ReadM SNP 0002.scaffold00003 1434899 1 T G - ReadM SNP 0002.scaffold00003 1435083 1 T C - ReadM SNP 0002.scaffold00003 1435135 1 T C - ReadM SNP 0002.scaffold00003 1435163 2 CA TG - Both SNP 0002.scaffold00003 1435297 1 A G scaffold1638 Both SNP 0002.scaffold00003 1435306 1 G T scaffold1638 Both SNP 0002.scaffold00003 1435326 1 A G scaffold1638 Both SNP 0002.scaffold00003 1435364 1 A G scaffold1638 Both SNP 0002.scaffold00003 1435374 1 T A scaffold1638 ReadM SNP 0002.scaffold00003 1435415 1 C T - Both SNP 0002.scaffold00003 1435594 1 T C scaffold1638 Both SNP 0002.scaffold00003 1435605 1 C A scaffold1638 Both SNP 0002.scaffold00003 1435836 1 A T scaffold1638 Both SNP 0002.scaffold00003 1435899 1 C A scaffold1638 ScafM SNP 0002.scaffold00003 1435959 1 T A scaffold1638 ScafM SNP 0002.scaffold00003 1435991 1 T C scaffold1638 ScafM INDEL 0002.scaffold00003 1436004 2 .. TC scaffold1638 ScafM SNP 0002.scaffold00003 1436045 1 G C scaffold1638 ScafM SNP 0002.scaffold00003 1436072 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1436075 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1436091 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1436125 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1436145 1 C T scaffold1638 Both SNP 0002.scaffold00003 1436215 1 C A scaffold1638 Both SNP 0002.scaffold00003 1436249 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1436334 1 A G scaffold1638 ScafM INDEL 0002.scaffold00003 1436341 28 ............................ TAATAATTTGACATTAAAATTTTGAGGC scaffold1638 ScafM SNP 0002.scaffold00003 1436368 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1436382 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1436670 1 A G scaffold1638 Both INDEL 0002.scaffold00003 1436771 1 T . scaffold1638 Both SNP 0002.scaffold00003 1436805 1 A C scaffold1638 Both SNP 0002.scaffold00003 1436946 1 C A scaffold1638 Both SNP 0002.scaffold00003 1436949 1 A G scaffold1638 Both SNP 0002.scaffold00003 1437046 1 T C scaffold1638 Both SNP 0002.scaffold00003 1437105 1 C A scaffold1638 Both SNP 0002.scaffold00003 1437143 1 G C scaffold1638 Both SNP 0002.scaffold00003 1437153 1 C T scaffold1638 Both SNP 0002.scaffold00003 1437204 1 G C scaffold1638 Both SNP 0002.scaffold00003 1437234 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1437256 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1437265 1 T C scaffold1638 ScafM INDEL 0002.scaffold00003 1437268 1 . T scaffold1638 ScafM SNP 0002.scaffold00003 1437344 1 T G scaffold1638 ReadM SNP 0002.scaffold00003 1437454 1 T G - ReadM SNP 0002.scaffold00003 1437485 1 C A - ReadM INDEL 0002.scaffold00003 1437658 1 G . - ReadM SNP 0002.scaffold00003 1437682 1 A C - ReadM SNP 0002.scaffold00003 1437769 1 A C - ReadM SNP 0002.scaffold00003 1437826 1 G A - ReadM SNP 0002.scaffold00003 1437920 1 C G - ReadM SNP 0002.scaffold00003 1437936 1 C T - ReadM SNP 0002.scaffold00003 1437966 1 T G - ReadM SNP 0002.scaffold00003 1437977 1 G A - ReadM SNP 0002.scaffold00003 1438162 1 A G - ReadM SNP 0002.scaffold00003 1438177 1 A G - ReadM SNP 0002.scaffold00003 1438502 1 C A - ReadM SNP 0002.scaffold00003 1438504 1 C T - ReadM SNP 0002.scaffold00003 1439065 1 T C - ReadM SNP 0002.scaffold00003 1439095 1 A G - ReadM SNP 0002.scaffold00003 1439137 1 A G - ReadM SNP 0002.scaffold00003 1439156 1 G T - ReadM SNP 0002.scaffold00003 1439202 1 C A - ReadM SNP 0002.scaffold00003 1439229 1 G T - ReadM SNP 0002.scaffold00003 1439311 1 T C - ReadM SNP 0002.scaffold00003 1439459 1 C T - ReadM SNP 0002.scaffold00003 1439641 1 T C - ReadM SNP 0002.scaffold00003 1439670 1 G A - ReadM SNP 0002.scaffold00003 1439703 1 T C - ReadM INDEL 0002.scaffold00003 1439719 1 T . - ReadM SNP 0002.scaffold00003 1439739 1 G A - ReadM SNP 0002.scaffold00003 1439806 1 G C - ReadM SNP 0002.scaffold00003 1439828 1 T A - ReadM SNP 0002.scaffold00003 1439837 1 G T - ReadM SNP 0002.scaffold00003 1439894 1 A T - ReadM SNP 0002.scaffold00003 1440342 1 A C - ReadM SNP 0002.scaffold00003 1440375 1 A T - ReadM INDEL 0002.scaffold00003 1440775 1 . A - ReadM SNP 0002.scaffold00003 1441051 1 G C - ReadM SNP 0002.scaffold00003 1441125 1 G C - Both SNP 0002.scaffold00003 1441226 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1441307 2 AG TA scaffold1638 Both SNP 0002.scaffold00003 1441401 1 T G scaffold1638 Both SNP 0002.scaffold00003 1441451 1 T C scaffold1638 ScafM INDEL 0002.scaffold00003 1441559 5 TGTCC ..... scaffold1638 Both SNP 0002.scaffold00003 1441667 1 C T scaffold1638 Both SNP 0002.scaffold00003 1441687 1 T C scaffold1638 Both SNP 0002.scaffold00003 1441714 1 C G scaffold1638 Both SNP 0002.scaffold00003 1441815 1 T G scaffold1638 Both SNP 0002.scaffold00003 1441827 1 T C scaffold1638 Both SNP 0002.scaffold00003 1441869 1 A T scaffold1638 Both SNP 0002.scaffold00003 1441966 1 A G scaffold1638 Both SNP 0002.scaffold00003 1441983 1 C G scaffold1638 Both INDEL 0002.scaffold00003 1441999 1 A . scaffold1638 ScafM SNP 0002.scaffold00003 1442015 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1442025 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1442032 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1442040 1 G A scaffold1638 Both SNP 0002.scaffold00003 1442112 1 C A scaffold1638 ScafM SNP 0002.scaffold00003 1442163 1 T C scaffold1638 ScafM SNP 0002.scaffold00003 1442187 1 C A scaffold1638 ScafM SNP 0002.scaffold00003 1442218 1 A T scaffold1638 ScafM SNP 0002.scaffold00003 1442221 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1442231 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1442242 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1442280 1 G T scaffold1638 ReadM INDEL 0002.scaffold00003 1442428 1 . G - ReadM SNP 0002.scaffold00003 1442505 1 T A - ReadM SNP 0002.scaffold00003 1442553 1 T C - ReadM SNP 0002.scaffold00003 1442555 1 G C - ReadM INDEL 0002.scaffold00003 1442597 1 . A - ScafM SNP 0002.scaffold00003 1442935 1 G A scaffold1638 Both SNP 0002.scaffold00003 1442961 1 T C scaffold1638 Both SNP 0002.scaffold00003 1442966 1 T C scaffold1638 Both SNP 0002.scaffold00003 1443213 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1443264 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1443317 1 C A scaffold1638 ScafM SNP 0002.scaffold00003 1443329 1 C T scaffold1638 ScafM SNP 0002.scaffold00003 1443352 1 A G scaffold1638 ScafM SNP 0002.scaffold00003 1443363 1 T A scaffold1638 ScafM SNP 0002.scaffold00003 1443387 1 G A scaffold1638 ScafM SNP 0002.scaffold00003 1443415 1 T G scaffold1638 Both SNP 0002.scaffold00003 1443436 1 C A scaffold1638 Both INDEL 0002.scaffold00003 1443475 1 A . scaffold1638 Both SNP 0002.scaffold00003 1443501 1 G A scaffold1638 Both SNP 0002.scaffold00003 1443556 1 G A scaffold1638 Both SNP 0002.scaffold00003 1443692 1 A T scaffold1638 Both SNP 0002.scaffold00003 1443740 1 C T scaffold1638 Both SNP 0002.scaffold00003 1443745 1 T C scaffold1638 ReadM SNP 0002.scaffold00003 1443808 1 T G - Both SNP 0002.scaffold00003 1443815 1 T C scaffold1638 Both SNP 0002.scaffold00003 1443926 1 T A scaffold1638 ReadM SNP 0002.scaffold00003 1443993 1 T C - ReadM SNP 0002.scaffold00003 1444076 1 G T - ReadM SNP 0002.scaffold00003 1444125 1 A G - ReadM SNP 0002.scaffold00003 1444131 1 G A - ReadM SNP 0002.scaffold00003 1444159 1 G T - ReadM SNP 0002.scaffold00003 1444232 1 A T - ReadM SNP 0002.scaffold00003 1444241 1 C G - ReadM SNP 0002.scaffold00003 1444266 1 C T - ReadM SNP 0002.scaffold00003 1444297 1 G A - ReadM SNP 0002.scaffold00003 1444377 1 T C - ReadM SNP 0002.scaffold00003 1444422 1 A G - ReadM SNP 0002.scaffold00003 1444676 1 A G - ReadM SNP 0002.scaffold00003 1444727 1 G T - ReadM SNP 0002.scaffold00003 1444842 1 C T - ReadM SNP 0002.scaffold00003 1444876 1 A G - ReadM SNP 0002.scaffold00003 1444930 1 T A - ReadM SNP 0002.scaffold00003 1444978 1 C T - ReadM SNP 0002.scaffold00003 1445077 1 C A - ReadM SNP 0002.scaffold00003 1445115 1 T C - ReadM INDEL 0002.scaffold00003 1445149 1 C . - ReadM SNP 0002.scaffold00003 1445222 1 C T - ReadM SNP 0002.scaffold00003 1445260 1 C G - ReadM SNP 0002.scaffold00003 1445264 1 G A - ReadM SNP 0002.scaffold00003 1445318 1 C G - ReadM SNP 0002.scaffold00003 1445344 1 A T - ReadM SNP 0002.scaffold00003 1445351 1 C A - ReadM SNP 0002.scaffold00003 1445457 1 G A - ReadM SNP 0002.scaffold00003 1445567 1 G A - ReadM SNP 0002.scaffold00003 1445592 1 C G - ReadM SNP 0002.scaffold00003 1445642 1 T A - ReadM SNP 0002.scaffold00003 1445721 1 A T - ReadM SNP 0002.scaffold00003 1445726 1 A G - ReadM SNP 0002.scaffold00003 1445802 1 G A - ReadM SNP 0002.scaffold00003 1445854 1 C T - ReadM SNP 0002.scaffold00003 1446017 1 G A - ReadM SNP 0002.scaffold00003 1446145 1 G A - ReadM SNP 0002.scaffold00003 1446271 1 T A - ReadM SNP 0002.scaffold00003 1446344 1 A G - ReadM SNP 0002.scaffold00003 1446377 1 G A - ReadM SNP 0002.scaffold00003 1446547 1 A G - ReadM SNP 0002.scaffold00003 1446559 1 A G - ReadM SNP 0002.scaffold00003 1446570 1 G A - ReadM SNP 0002.scaffold00003 1446810 1 C A - ReadM SNP 0002.scaffold00003 1447067 1 C T - ReadM SNP 0002.scaffold00003 1447087 1 T C - ReadM SNP 0002.scaffold00003 1447723 1 G A - ReadM SNP 0002.scaffold00003 1447733 1 T A - ReadM SNP 0002.scaffold00003 1447859 1 G A - ReadM SNP 0002.scaffold00003 1447939 1 A T - ReadM SNP 0002.scaffold00003 1447948 1 G T - ReadM SNP 0002.scaffold00003 1448070 1 C G - ReadM SNP 0002.scaffold00003 1448134 1 T C - ReadM SNP 0002.scaffold00003 1448165 1 G C - ReadM SNP 0002.scaffold00003 1448284 1 T C - ReadM INDEL 0002.scaffold00003 1448317 1 T . - ReadM SNP 0002.scaffold00003 1448404 1 T C - ReadM SNP 0002.scaffold00003 1448592 1 A G - ReadM SNP 0002.scaffold00003 1448628 1 T C - ReadM SNP 0002.scaffold00003 1448657 1 A G - ReadM SNP 0002.scaffold00003 1448684 1 G T - ReadM SNP 0002.scaffold00003 1448823 1 G A - ReadM SNP 0002.scaffold00003 1448967 1 G C - ReadM SNP 0002.scaffold00003 1448996 1 G A - ReadM SNP 0002.scaffold00003 1449048 1 A G - ReadM SNP 0002.scaffold00003 1449077 1 A G - ReadM SNP 0002.scaffold00003 1449134 1 C T - ReadM SNP 0002.scaffold00003 1449161 1 T C - ReadM SNP 0002.scaffold00003 1449180 1 T C - ReadM SNP 0002.scaffold00003 1449678 1 T G - ReadM SNP 0002.scaffold00003 1449723 1 G A - ReadM SNP 0002.scaffold00003 1449768 1 C A - ReadM SNP 0003.scaffold00019 7256 1 C T - ReadM SNP 0003.scaffold00019 11832 1 A G - ScafM INDEL 0003.scaffold00019 13262 1 . T scaffold1298 ReadM SNP 0003.scaffold00019 42053 1 G A - ScafM INDEL 0003.scaffold00019 48798 1 A . scaffold1298 ReadM SNP 0003.scaffold00019 66743 1 T A - ReadM SNP 0003.scaffold00019 85536 1 G A - ReadM SNP 0003.scaffold00019 90765 1 G T - Both SNP 0003.scaffold00019 151492 1 T C scaffold1298 ScafM SNP 0003.scaffold00019 161329 1 G A scaffold1298 ScafM SNP 0003.scaffold00019 161331 1 C G scaffold1298 ScafM INDEL 0003.scaffold00019 161449 1 . T scaffold1298 ScafM INDEL 0003.scaffold00019 161460 1 A . scaffold1298 ScafM SNP 0003.scaffold00019 161588 1 T A scaffold1298 ScafM SNP 0003.scaffold00019 161652 1 C T scaffold1298 ScafM INDEL 0003.scaffold00019 164663 1 T . scaffold1298 ScafM SNP 0003.scaffold00019 164679 1 C T scaffold1298 ScafM SNP 0003.scaffold00019 165296 1 A G scaffold1298 ScafM SNP 0003.scaffold00019 165381 1 T G scaffold1298 ScafM SNP 0003.scaffold00019 165398 1 G A scaffold1298 ScafM SNP 0003.scaffold00019 165402 1 A G scaffold1298 ScafM SNP 0003.scaffold00019 165453 1 A C scaffold1298 ScafM SNP 0003.scaffold00019 165472 1 C T scaffold1298 ScafM SNP 0003.scaffold00019 165601 1 G A scaffold1298 ScafM SNP 0003.scaffold00019 166016 1 G A scaffold1298 ScafM SNP 0003.scaffold00019 166381 1 C A scaffold1298 ScafM INDEL 0003.scaffold00019 166489 1 T . scaffold1298 ScafM INDEL 0003.scaffold00019 166590 53 ..................................................... AGAATTTTTGCAAAGTGATTTTCATATTCGTGCCTATAACTATAATTCTATAA scaffold1298 ScafM SNP 0003.scaffold00019 166610 1 T C scaffold1298 ReadM SNP 0003.scaffold00019 189690 1 T A - Both SNP 0003.scaffold00019 204095 1 T G scaffold438 ScafM INDEL 0003.scaffold00019 219449 1 A . scaffold438 ScafM INDEL 0003.scaffold00019 226242 1 G . scaffold438 ScafM INDEL 0003.scaffold00019 226394 2 GA .. scaffold438 ScafM INDEL 0003.scaffold00019 229912 1 T . scaffold438 ReadM SNP 0003.scaffold00019 233490 1 C T - ReadM SNP 0003.scaffold00019 235184 1 T C - ScafM INDEL 0003.scaffold00019 251174 3 GGG ... scaffold10664 Both SNP 0003.scaffold00019 253659 1 G C scaffold10664 ScafM SNP 0003.scaffold00019 262308 1 T C scaffold5846 ScafM SNP 0003.scaffold00019 262317 1 G C scaffold5846 ScafM SNP 0003.scaffold00019 262330 1 A G scaffold5846 ScafM SNP 0003.scaffold00019 262340 1 T C scaffold5846 ScafM SNP 0003.scaffold00019 262354 1 T C scaffold5846 ScafM SNP 0003.scaffold00019 262382 1 C T scaffold5846 ScafM SNP 0003.scaffold00019 262434 1 G A scaffold5846 ScafM SNP 0003.scaffold00019 262457 1 G C scaffold5846 ScafM SNP 0003.scaffold00019 262463 1 A G scaffold5846 ScafM SNP 0003.scaffold00019 262490 2 CC TA scaffold5846 ScafM SNP 0003.scaffold00019 262498 1 C T scaffold5846 ScafM SNP 0003.scaffold00019 262540 2 AG TA scaffold5846 ScafM SNP 0003.scaffold00019 262573 1 G A scaffold5846 ScafM SNP 0003.scaffold00019 262607 1 T C scaffold5846 ScafM SNP 0003.scaffold00019 262620 1 C A scaffold5846 ScafM SNP 0003.scaffold00019 262633 1 A G scaffold5846 ScafM SNP 0003.scaffold00019 262637 1 G A scaffold5846 ScafM SNP 0003.scaffold00019 262648 1 C T scaffold5846 ScafM SNP 0003.scaffold00019 262654 1 A G scaffold5846 ScafM INDEL 0003.scaffold00019 262665 1 G . scaffold5846 ScafM SNP 0003.scaffold00019 262668 1 G A scaffold5846 ScafM SNP 0003.scaffold00019 262708 1 A G scaffold5846 ScafM SNP 0003.scaffold00019 262749 1 G T scaffold5846 ScafM SNP 0003.scaffold00019 262831 1 A G scaffold5846 ScafM SNP 0003.scaffold00019 262883 1 T C scaffold5846 ScafM SNP 0003.scaffold00019 262894 2 CC TA scaffold5846 ScafM INDEL 0003.scaffold00019 285889 1 . T scaffold1373 ReadM SNP 0003.scaffold00019 291131 1 A C - ReadM SNP 0003.scaffold00019 291133 1 A T - ReadM SNP 0003.scaffold00019 293400 1 T C - ReadM SNP 0003.scaffold00019 298920 1 C T - Both SNP 0003.scaffold00019 308299 1 C A scaffold1373 ReadM SNP 0003.scaffold00019 309375 1 A C - ReadM INDEL 0003.scaffold00019 317286 1 A . - ScafM SNP 0004.scaffold00019 2086 1 G C scaffold8486 ScafM SNP 0004.scaffold00019 2213 1 A G scaffold8486 ScafM SNP 0004.scaffold00019 2242 1 G A scaffold8486 ScafM SNP 0004.scaffold00019 2331 1 G A scaffold8486 ScafM SNP 0004.scaffold00019 2351 1 C T scaffold8486 ScafM INDEL 0004.scaffold00019 2395 12 TCTTATATCCAC ............ scaffold8486 ScafM INDEL 0004.scaffold00019 2409 1 C . scaffold8486 ScafM SNP 0004.scaffold00019 2424 1 A G scaffold8486 ScafM SNP 0004.scaffold00019 2475 1 A G scaffold8486 ScafM SNP 0004.scaffold00019 4284 1 A G scaffold16023 ScafM SNP 0004.scaffold00019 4288 1 G A scaffold16023 ScafM SNP 0004.scaffold00019 4432 2 CA GG scaffold16023 ScafM SNP 0004.scaffold00019 4445 1 C A scaffold16023 ScafM SNP 0004.scaffold00019 4455 1 A G scaffold16023 ScafM SNP 0004.scaffold00019 4666 1 T C scaffold16023 ScafM SNP 0004.scaffold00019 4712 1 A G scaffold16023 ScafM SNP 0004.scaffold00019 4737 1 T G scaffold16023 ScafM SNP 0004.scaffold00019 4776 1 T A scaffold16023 ScafM SNP 0004.scaffold00019 5452 1 A T scaffold4498 ScafM INDEL 0004.scaffold00019 5467 1 . T scaffold4498 ScafM SNP 0004.scaffold00019 5472 1 C A scaffold4498 ScafM SNP 0004.scaffold00019 5483 1 C T scaffold4498 ScafM SNP 0004.scaffold00019 5496 1 T C scaffold4498 ScafM SNP 0004.scaffold00019 5498 1 G A scaffold4498 ScafM SNP 0004.scaffold00019 5501 1 T G scaffold4498 ScafM SNP 0004.scaffold00019 5518 1 G A scaffold4498 ScafM SNP 0004.scaffold00019 5530 1 A G scaffold4498 ScafM SNP 0004.scaffold00019 5537 4 TTCG ACTT scaffold4498 ScafM SNP 0004.scaffold00019 5546 1 C A scaffold4498 ScafM SNP 0004.scaffold00019 5555 1 T A scaffold4498 ScafM SNP 0004.scaffold00019 5561 1 A C scaffold4498 ScafM SNP 0004.scaffold00019 5569 1 A G scaffold4498 ScafM INDEL 0004.scaffold00019 5619 1 T . scaffold4498 ScafM SNP 0004.scaffold00019 5621 1 T A scaffold4498 ScafM SNP 0004.scaffold00019 5673 1 A G scaffold4498 ScafM SNP 0004.scaffold00019 5698 1 C T scaffold4498 ScafM SNP 0004.scaffold00019 5701 1 A C scaffold4498 ScafM SNP 0004.scaffold00019 5714 1 G C scaffold4498 Both SNP 0004.scaffold00019 6233 1 C G scaffold184 ReadM SNP 0004.scaffold00019 15214 1 C T - ReadM SNP 0004.scaffold00019 17605 1 T C - ReadM SNP 0004.scaffold00019 17612 1 T A - ScafM SNP 0004.scaffold00019 21102 1 G A scaffold20232 ScafM SNP 0004.scaffold00019 21109 1 C T scaffold20232 ScafM SNP 0004.scaffold00019 21156 1 G T scaffold20232 ScafM SNP 0004.scaffold00019 21235 1 G A scaffold20232 ScafM SNP 0004.scaffold00019 21276 1 A G scaffold29019 ScafM SNP 0004.scaffold00019 21351 1 A G scaffold29019 ScafM SNP 0004.scaffold00019 21438 1 T C scaffold29019 ScafM SNP 0004.scaffold00019 21441 1 G T scaffold29019 ScafM SNP 0004.scaffold00019 21449 1 C T scaffold29019 ScafM SNP 0004.scaffold00019 21473 1 T A scaffold29019 ScafM SNP 0004.scaffold00019 21536 1 C T scaffold29019 ScafM SNP 0004.scaffold00019 21565 2 GC AT scaffold29019 ScafM SNP 0004.scaffold00019 21624 1 T G scaffold29019 ScafM SNP 0004.scaffold00019 21701 1 T C scaffold29019 ScafM SNP 0004.scaffold00019 24074 1 C T scaffold12842 ScafM SNP 0004.scaffold00019 24076 1 G T scaffold12842 ScafM SNP 0004.scaffold00019 24098 1 T C scaffold12842 ScafM SNP 0004.scaffold00019 24121 1 T C scaffold12842 ScafM SNP 0004.scaffold00019 24173 1 T A scaffold12842 ScafM SNP 0004.scaffold00019 24183 1 A C scaffold12842 ScafM SNP 0004.scaffold00019 24209 1 C T scaffold12842 ScafM SNP 0004.scaffold00019 24240 1 C T scaffold12842 ScafM SNP 0004.scaffold00019 24245 1 G A scaffold12842 ScafM SNP 0004.scaffold00019 24261 1 A G scaffold12842 ScafM SNP 0004.scaffold00019 24264 1 A G scaffold12842 ScafM SNP 0004.scaffold00019 24266 1 A G scaffold12842 ScafM SNP 0004.scaffold00019 24335 1 G A scaffold12842 ScafM INDEL 0004.scaffold00019 24401 1 . G scaffold12842 ScafM SNP 0004.scaffold00019 24431 1 A G scaffold12842 ScafM SNP 0004.scaffold00019 24438 1 T A scaffold12842 ScafM SNP 0004.scaffold00019 24447 1 T C scaffold12842 ScafM SNP 0004.scaffold00019 24492 1 G A scaffold12842 ScafM SNP 0004.scaffold00019 24511 1 G A scaffold12842 ScafM INDEL 0004.scaffold00019 24545 3 AGA ... scaffold12842 ScafM SNP 0004.scaffold00019 24549 5 GGGAA TCTTT scaffold12842 ScafM SNP 0004.scaffold00019 24555 2 TA CC scaffold12842 ScafM SNP 0004.scaffold00019 24578 1 C G scaffold12842 ScafM SNP 0004.scaffold00019 29928 1 G C scaffold13615 ScafM SNP 0004.scaffold00019 30353 1 C T scaffold21625 ScafM SNP 0004.scaffold00019 30374 1 C T scaffold21625 ScafM SNP 0004.scaffold00019 30391 1 T C scaffold21625 ScafM SNP 0004.scaffold00019 30777 1 C G scaffold3460 ScafM SNP 0004.scaffold00019 31625 1 A G scaffold3460 ScafM SNP 0004.scaffold00019 31828 1 A T scaffold3460 Both INDEL 0004.scaffold00019 31880 1 T . scaffold3460 ScafM INDEL 0004.scaffold00019 31938 2 TT .A scaffold3460 ScafM SNP 0004.scaffold00019 32034 1 T C scaffold3460 Both SNP 0004.scaffold00019 67635 1 A G scaffold27911 ReadM SNP 0004.scaffold00019 89226 1 A G - ScafM SNP 0004.scaffold00019 105907 1 T G scaffold3642 ScafM SNP 0004.scaffold00019 105933 1 T G scaffold3642 ScafM SNP 0004.scaffold00019 105965 1 G T scaffold3642 ScafM SNP 0004.scaffold00019 105969 1 T C scaffold3642 ScafM SNP 0004.scaffold00019 105982 1 G T scaffold3642 ScafM SNP 0004.scaffold00019 106004 1 A G scaffold3642 ReadM SNP 0004.scaffold00019 124396 1 T C - ReadM INDEL 0004.scaffold00019 131153 1 . A - ReadM SNP 0004.scaffold00019 134392 1 G T - Both SNP 0004.scaffold00019 139958 1 C G scaffold5187 ReadM SNP 0004.scaffold00019 160167 1 G A - ReadM SNP 0004.scaffold00019 171536 1 A G - ScafM SNP 0004.scaffold00019 183753 1 A T scaffold1543 ScafM SNP 0004.scaffold00019 195601 2 AA GG scaffold1543 ScafM SNP 0004.scaffold00019 195604 2 CA GG scaffold1543 ScafM SNP 0004.scaffold00019 195607 6 AAAACA GGTGGG scaffold1543 ScafM SNP 0004.scaffold00019 195614 2 AA GG scaffold1543 ScafM SNP 0004.scaffold00019 195617 3 ATC GGG scaffold1543 ScafM INDEL 0004.scaffold00019 195621 3 AAT ... scaffold1543 ScafM INDEL 0004.scaffold00019 195626 2 TT .G scaffold1543 ScafM INDEL 0004.scaffold00019 197154 1 . T scaffold1543 ScafM INDEL 0004.scaffold00019 199680 18 .................. TATTAATTACCTGTCACC scaffold1543 ReadM SNP 0004.scaffold00019 212396 1 G A - ReadM SNP 0004.scaffold00019 232232 1 A C - ReadM SNP 0004.scaffold00019 232711 1 A T - ReadM SNP 0004.scaffold00019 234097 1 A T - ReadM SNP 0004.scaffold00019 245307 1 A T - ReadM SNP 0004.scaffold00019 247481 1 C T - ReadM SNP 0004.scaffold00019 249533 1 C G - Both SNP 0004.scaffold00019 253224 1 G T scaffold7608 ScafM INDEL 0004.scaffold00019 259764 1 . A scaffold7608 ScafM SNP 0004.scaffold00019 260184 1 C T scaffold7608 ScafM INDEL 0004.scaffold00019 260185 5 ..... TTTCA scaffold7608 ReadM SNP 0004.scaffold00019 266127 1 C T - ReadM SNP 0004.scaffold00019 288655 1 A C - ScafM SNP 0004.scaffold00019 305735 1 C A scaffold2847 ScafM INDEL 0004.scaffold00019 306090 1 . A scaffold2847 ScafM INDEL 0004.scaffold00019 318371 1 . T scaffold2847 ScafM SNP 0004.scaffold00019 324851 1 C T scaffold21094 ScafM SNP 0004.scaffold00019 324862 1 G T scaffold21094 ScafM INDEL 0004.scaffold00019 324869 1 . A scaffold21094 ScafM SNP 0004.scaffold00019 324876 1 G A scaffold21094 Both SNP 0004.scaffold00019 339987 1 T C scaffold7783 ScafM SNP 0004.scaffold00019 343736 1 C G scaffold7783 ReadM SNP 0004.scaffold00019 378849 1 C A - ScafM INDEL 0004.scaffold00019 390315 1 . C scaffold12036 ScafM INDEL 0004.scaffold00019 390334 1 C . scaffold12036 ScafM INDEL 0004.scaffold00019 390343 1 A . scaffold12036 ScafM INDEL 0004.scaffold00019 390358 1 A . scaffold12036 ScafM INDEL 0004.scaffold00019 390363 1 C . scaffold12036 ScafM INDEL 0004.scaffold00019 390373 2 AC .. scaffold12036 ScafM INDEL 0004.scaffold00019 390393 2 AC .. scaffold12036 ScafM SNP 0004.scaffold00019 394276 1 A T scaffold13345 ScafM SNP 0004.scaffold00019 394383 1 C G scaffold13345 ScafM SNP 0004.scaffold00019 394408 1 T C scaffold13345 ScafM INDEL 0004.scaffold00019 394420 1 T . scaffold13345 ScafM SNP 0004.scaffold00019 394426 1 A T scaffold13345 ScafM SNP 0004.scaffold00019 394433 2 GG CA scaffold13345 ReadM SNP 0004.scaffold00019 411276 1 G A - ReadM SNP 0004.scaffold00019 438944 1 G T - ScafM SNP 0004.scaffold00019 443983 1 A T scaffold11769 ReadM SNP 0004.scaffold00019 465441 1 A G - ScafM SNP 0004.scaffold00019 482551 1 T A scaffold24979 ScafM SNP 0004.scaffold00019 482592 1 G T scaffold24979 ScafM SNP 0004.scaffold00019 484277 1 T C scaffold5134 ScafM SNP 0004.scaffold00019 484286 1 C T scaffold5134 ScafM SNP 0004.scaffold00019 484292 1 C T scaffold5134 ScafM INDEL 0004.scaffold00019 484324 3 ... TAA scaffold5134 ScafM SNP 0004.scaffold00019 484338 1 G T scaffold5134 ScafM SNP 0004.scaffold00019 484359 1 C T scaffold5134 ScafM SNP 0004.scaffold00019 484372 1 T C scaffold5134 ScafM SNP 0004.scaffold00019 484405 1 T C scaffold5134 ScafM SNP 0004.scaffold00019 484441 1 G A scaffold5134 ScafM SNP 0004.scaffold00019 484447 1 G A scaffold5134 ScafM SNP 0004.scaffold00019 484496 1 T C scaffold5134 ScafM SNP 0004.scaffold00019 484523 1 G A scaffold5134 ScafM SNP 0004.scaffold00019 484528 1 T A scaffold5134 ScafM SNP 0004.scaffold00019 484539 1 C A scaffold5134 ScafM SNP 0004.scaffold00019 484551 1 A T scaffold5134 ReadM SNP 0004.scaffold00019 489743 1 C G - ReadM SNP 0004.scaffold00019 490417 1 C G - ScafM INDEL 0004.scaffold00019 491743 1 . A scaffold10775 ScafM SNP 0004.scaffold00019 491795 1 A G scaffold10775 ScafM SNP 0004.scaffold00019 491851 1 A T scaffold10775 ScafM SNP 0004.scaffold00019 491856 1 G A scaffold10775 ScafM SNP 0004.scaffold00019 491865 1 G C scaffold10775 ScafM INDEL 0004.scaffold00019 518417 1 . A scaffold3088 ScafM INDEL 0004.scaffold00019 520916 1 . G scaffold3088 ReadM INDEL 0004.scaffold00019 520971 1 . T - ScafM INDEL 0004.scaffold00019 523232 14 .............. CCCCCCCCCCCCCC scaffold3088 ReadM SNP 0004.scaffold00019 540062 1 T G - ReadM SNP 0004.scaffold00019 540123 1 C T - ReadM SNP 0004.scaffold00019 540186 1 C G - ReadM SNP 0004.scaffold00019 540203 1 C T - ScafM SNP 0004.scaffold00019 540327 1 C G scaffold3088 ScafM INDEL 0004.scaffold00019 540332 8 ........ AACCGATC scaffold3088 ScafM SNP 0004.scaffold00019 540383 2 CT AC scaffold3088 ScafM SNP 0004.scaffold00019 540396 1 G C scaffold3088 ScafM SNP 0004.scaffold00019 540432 1 G A scaffold3088 Both SNP 0004.scaffold00019 540489 1 A T scaffold3088 Both SNP 0004.scaffold00019 540511 1 G A scaffold3088 Both SNP 0004.scaffold00019 540521 1 T A scaffold3088 ScafM SNP 0004.scaffold00019 540562 1 C A scaffold3088 ScafM SNP 0004.scaffold00019 540569 1 C T scaffold3088 ScafM INDEL 0004.scaffold00019 540574 2 .. CA scaffold3088 ScafM SNP 0004.scaffold00019 540582 1 T A scaffold3088 ScafM SNP 0004.scaffold00019 540600 1 T C scaffold3088 ScafM SNP 0004.scaffold00019 540682 2 TT CA scaffold3088 ScafM SNP 0004.scaffold00019 540867 1 T A scaffold3088 ScafM SNP 0004.scaffold00019 540876 1 A T scaffold3088 ScafM SNP 0004.scaffold00019 540929 1 C T scaffold3088 ScafM SNP 0004.scaffold00019 540945 1 G A scaffold3088 ScafM SNP 0004.scaffold00019 540955 1 G C scaffold3088 ScafM SNP 0004.scaffold00019 540973 1 G A scaffold3088 ScafM SNP 0004.scaffold00019 540984 1 C G scaffold3088 ScafM INDEL 0004.scaffold00019 541019 2 .G AA scaffold3088 ScafM SNP 0004.scaffold00019 541053 1 T C scaffold3088 ScafM SNP 0004.scaffold00019 541080 1 A G scaffold3088 ScafM SNP 0004.scaffold00019 541108 1 A C scaffold3088 ScafM SNP 0004.scaffold00019 541117 1 T A scaffold3088 ScafM SNP 0004.scaffold00019 541124 1 G T scaffold3088 ScafM SNP 0004.scaffold00019 541136 1 C T scaffold3088 ScafM SNP 0004.scaffold00019 541259 1 A G scaffold3088 ScafM SNP 0004.scaffold00019 541306 1 A T scaffold3088 ScafM SNP 0004.scaffold00019 541318 1 C A scaffold3088 ScafM SNP 0004.scaffold00019 541397 1 A G scaffold3088 ReadM SNP 0004.scaffold00019 541589 1 A G - ReadM SNP 0004.scaffold00019 541639 1 C T - ReadM SNP 0004.scaffold00019 541680 1 G C - Both SNP 0004.scaffold00019 541952 1 C T scaffold15672 Both SNP 0004.scaffold00019 542001 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 542284 1 C T scaffold15672 ScafM INDEL 0004.scaffold00019 542295 2 .. AA scaffold15672 Both SNP 0004.scaffold00019 542510 1 A T scaffold15672 Both SNP 0004.scaffold00019 542631 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 542857 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 542901 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 543097 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 543111 1 G A scaffold15672 ScafM INDEL 0004.scaffold00019 543123 3 ... TTA scaffold15672 ScafM SNP 0004.scaffold00019 543184 1 C A scaffold15672 ScafM SNP 0004.scaffold00019 543222 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 543308 1 A C scaffold15672 ReadM SNP 0004.scaffold00019 543558 1 T A - ReadM SNP 0004.scaffold00019 543583 1 T C - ReadM SNP 0004.scaffold00019 543643 1 A C - ReadM SNP 0004.scaffold00019 543670 1 G A - ReadM SNP 0004.scaffold00019 543685 1 G T - ReadM SNP 0004.scaffold00019 543771 1 A G - ReadM SNP 0004.scaffold00019 543775 1 A T - ReadM SNP 0004.scaffold00019 543851 1 A G - ReadM SNP 0004.scaffold00019 543902 1 A G - ReadM SNP 0004.scaffold00019 543955 1 G C - ReadM SNP 0004.scaffold00019 543967 1 C G - ReadM SNP 0004.scaffold00019 544013 1 G T - ReadM SNP 0004.scaffold00019 544019 1 T C - ReadM SNP 0004.scaffold00019 544255 1 T C - ReadM SNP 0004.scaffold00019 544300 1 G A - ReadM SNP 0004.scaffold00019 544309 1 A G - ReadM SNP 0004.scaffold00019 544403 1 C T - ReadM SNP 0004.scaffold00019 544448 1 G C - ReadM SNP 0004.scaffold00019 544508 1 G T - ReadM SNP 0004.scaffold00019 544572 1 A G - ScafM SNP 0004.scaffold00019 544953 1 A G scaffold1337 ScafM INDEL 0004.scaffold00019 544994 2 .A TT scaffold1337 Both SNP 0004.scaffold00019 545231 1 A G scaffold15672 ReadM INDEL 0004.scaffold00019 545302 1 . T - ScafM INDEL 0004.scaffold00019 545302 2 .A TT scaffold15672 Both SNP 0004.scaffold00019 545323 1 A C scaffold15672 Both SNP 0004.scaffold00019 545427 1 G T scaffold15672 Both SNP 0004.scaffold00019 545537 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 545569 2 CC GT scaffold15672 Both SNP 0004.scaffold00019 545673 1 G A scaffold15672 Both INDEL 0004.scaffold00019 545716 1 . A scaffold15672 Both SNP 0004.scaffold00019 545772 1 G C scaffold15672 Both SNP 0004.scaffold00019 545820 1 C G scaffold15672 Both SNP 0004.scaffold00019 545831 1 G A scaffold15672 Both SNP 0004.scaffold00019 546051 1 G T scaffold15672 Both SNP 0004.scaffold00019 546067 1 T C scaffold15672 Both SNP 0004.scaffold00019 546103 1 C T scaffold15672 Both SNP 0004.scaffold00019 546164 1 T C scaffold15672 Both SNP 0004.scaffold00019 546222 1 T A scaffold15672 Both SNP 0004.scaffold00019 546327 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 546480 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 546511 1 T G scaffold15672 ScafM SNP 0004.scaffold00019 546513 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 546535 1 C A scaffold15672 ScafM SNP 0004.scaffold00019 546548 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 546586 1 G A scaffold15672 Both SNP 0004.scaffold00019 546748 1 A T scaffold15672 ScafM INDEL 0004.scaffold00019 546892 3 ... ATT scaffold15672 ScafM SNP 0004.scaffold00019 546922 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 546940 1 C A scaffold15672 Both SNP 0004.scaffold00019 547187 1 A C scaffold15672 Both SNP 0004.scaffold00019 547320 1 C A scaffold15672 Both SNP 0004.scaffold00019 547421 1 G T scaffold15672 Both SNP 0004.scaffold00019 547454 1 T G scaffold15672 Both SNP 0004.scaffold00019 547498 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 547521 1 G T scaffold15672 ScafM SNP 0004.scaffold00019 547562 1 G C scaffold15672 Both SNP 0004.scaffold00019 547652 1 G A scaffold15672 Both SNP 0004.scaffold00019 547712 1 G T scaffold15672 Both SNP 0004.scaffold00019 547754 1 A T scaffold15672 Both SNP 0004.scaffold00019 547796 1 T C scaffold15672 Both SNP 0004.scaffold00019 547903 1 C T scaffold15672 Both SNP 0004.scaffold00019 547909 1 G A scaffold15672 Both SNP 0004.scaffold00019 547913 1 A G scaffold15672 Both SNP 0004.scaffold00019 547976 1 A G scaffold15672 Both SNP 0004.scaffold00019 548042 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 548128 1 G A scaffold15672 Both SNP 0004.scaffold00019 548173 1 A T scaffold15672 ScafM SNP 0004.scaffold00019 548330 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 548335 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 548344 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 548346 1 A T scaffold15672 Both SNP 0004.scaffold00019 548434 1 C T scaffold15672 Both SNP 0004.scaffold00019 548565 1 G T scaffold15672 ScafM SNP 0004.scaffold00019 548612 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 548624 2 TT AA scaffold15672 Both SNP 0004.scaffold00019 548681 1 A C scaffold15672 ReadM SNP 0004.scaffold00019 549093 1 A T - ReadM SNP 0004.scaffold00019 549111 1 A G - ReadM SNP 0004.scaffold00019 549118 1 C T - ReadM SNP 0004.scaffold00019 549395 1 T C - Both SNP 0004.scaffold00019 549616 1 T G scaffold15672 Both INDEL 0004.scaffold00019 549698 1 . T scaffold15672 Both SNP 0004.scaffold00019 549711 1 T C scaffold15672 ScafM INDEL 0004.scaffold00019 549854 1 . C scaffold15672 ScafM INDEL 0004.scaffold00019 549855 1 . C scaffold15672 ScafM SNP 0004.scaffold00019 549890 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 549907 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 549921 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 549924 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 549943 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 550065 2 AC CT scaffold15672 ScafM INDEL 0004.scaffold00019 550176 1 . A scaffold15672 ScafM SNP 0004.scaffold00019 550203 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 550208 1 G A scaffold15672 ScafM INDEL 0004.scaffold00019 550215 1 . A scaffold15672 ScafM INDEL 0004.scaffold00019 550221 1 . T scaffold15672 ScafM SNP 0004.scaffold00019 550237 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 550265 1 A G scaffold15672 ScafM INDEL 0004.scaffold00019 550503 10 .......... TCGATAAATA scaffold15672 ScafM SNP 0004.scaffold00019 550585 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 550664 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 550730 1 G T scaffold15672 ScafM SNP 0004.scaffold00019 550754 1 G C scaffold15672 ScafM SNP 0004.scaffold00019 550798 1 A G scaffold15672 Both SNP 0004.scaffold00019 550960 1 C A scaffold15672 ScafM INDEL 0004.scaffold00019 551068 10 .......... ATTATGCGAA scaffold15672 Both SNP 0004.scaffold00019 551295 1 T G scaffold15672 Both SNP 0004.scaffold00019 551319 1 G A scaffold15672 Both SNP 0004.scaffold00019 551524 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 551591 1 G A scaffold15672 ReadM SNP 0004.scaffold00019 551790 1 T C - ScafM INDEL 0004.scaffold00019 551898 1 G . scaffold15672 ScafM SNP 0004.scaffold00019 551928 1 A T scaffold15672 ScafM SNP 0004.scaffold00019 551973 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 552203 1 C A scaffold15672 ScafM SNP 0004.scaffold00019 552268 1 A C scaffold15672 ScafM INDEL 0004.scaffold00019 552310 2 TA .. scaffold15672 ScafM INDEL 0004.scaffold00019 552352 2 .. AA scaffold15672 ScafM SNP 0004.scaffold00019 552373 1 T C scaffold15672 ReadM SNP 0004.scaffold00019 552913 1 G C - ReadM SNP 0004.scaffold00019 552964 1 G A - ReadM SNP 0004.scaffold00019 552968 1 C T - ReadM INDEL 0004.scaffold00019 553059 1 . T - ReadM SNP 0004.scaffold00019 553126 1 T C - ReadM SNP 0004.scaffold00019 553162 1 T A - ReadM SNP 0004.scaffold00019 553210 1 G A - ReadM SNP 0004.scaffold00019 553225 1 A T - ReadM SNP 0004.scaffold00019 553320 1 T C - ScafM SNP 0004.scaffold00019 553560 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 553568 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 553574 1 G A scaffold15672 Both SNP 0004.scaffold00019 553625 1 T C scaffold15672 Both SNP 0004.scaffold00019 553709 1 G T scaffold15672 Both SNP 0004.scaffold00019 553711 1 G A scaffold15672 Both SNP 0004.scaffold00019 553772 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 553839 1 C A scaffold15672 ScafM SNP 0004.scaffold00019 553843 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 553861 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 553868 1 A T scaffold15672 Both SNP 0004.scaffold00019 554002 1 C G scaffold15672 ReadM SNP 0004.scaffold00019 554154 1 C A - ReadM SNP 0004.scaffold00019 554232 1 A T - ReadM SNP 0004.scaffold00019 554285 1 A C - ReadM SNP 0004.scaffold00019 554310 1 G A - ReadM SNP 0004.scaffold00019 554400 1 G C - ReadM SNP 0004.scaffold00019 554413 1 C G - ReadM SNP 0004.scaffold00019 554493 1 T G - ReadM SNP 0004.scaffold00019 554545 1 G A - ReadM SNP 0004.scaffold00019 554606 1 C T - ReadM SNP 0004.scaffold00019 554610 1 T C - ReadM SNP 0004.scaffold00019 554646 1 A T - ReadM SNP 0004.scaffold00019 554728 1 T C - ReadM SNP 0004.scaffold00019 554810 1 T G - ReadM SNP 0004.scaffold00019 555090 1 C A - ReadM INDEL 0004.scaffold00019 555123 1 A . - ReadM SNP 0004.scaffold00019 555134 1 A G - ReadM SNP 0004.scaffold00019 555148 1 T G - ReadM SNP 0004.scaffold00019 555239 1 G A - ReadM SNP 0004.scaffold00019 555294 1 G A - ReadM INDEL 0004.scaffold00019 555408 1 . A - ReadM SNP 0004.scaffold00019 555549 1 A C - ReadM SNP 0004.scaffold00019 555638 1 G A - ReadM SNP 0004.scaffold00019 555711 1 T C - ReadM SNP 0004.scaffold00019 555824 1 T C - ReadM SNP 0004.scaffold00019 555917 1 C T - ReadM SNP 0004.scaffold00019 556033 1 G A - ReadM SNP 0004.scaffold00019 556058 1 G T - ReadM SNP 0004.scaffold00019 556081 1 C T - ReadM SNP 0004.scaffold00019 556445 1 G A - ReadM SNP 0004.scaffold00019 556470 1 G T - ReadM SNP 0004.scaffold00019 556549 1 A G - ReadM SNP 0004.scaffold00019 556562 1 C G - ScafM SNP 0004.scaffold00019 556813 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 556900 1 A C scaffold15672 ScafM SNP 0004.scaffold00019 556953 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 556978 1 C G scaffold15672 ScafM SNP 0004.scaffold00019 556987 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 556990 1 G A scaffold15672 ScafM SNP 0004.scaffold00019 557107 1 A G scaffold15672 Both SNP 0004.scaffold00019 557222 1 G A scaffold15672 Both SNP 0004.scaffold00019 557409 1 A C scaffold15672 Both SNP 0004.scaffold00019 557452 1 T G scaffold15672 Both SNP 0004.scaffold00019 557511 1 A C scaffold15672 Both SNP 0004.scaffold00019 557576 1 C T scaffold15672 Both SNP 0004.scaffold00019 557668 1 A G scaffold15672 Both SNP 0004.scaffold00019 557677 1 C T scaffold15672 Both INDEL 0004.scaffold00019 557709 2 .. AT scaffold15672 Both SNP 0004.scaffold00019 557759 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 557798 1 A C scaffold15672 ScafM SNP 0004.scaffold00019 557803 1 C T scaffold15672 ScafM INDEL 0004.scaffold00019 557822 10 TGTTGGCTTG .......... scaffold15672 ScafM INDEL 0004.scaffold00019 557833 1 T . scaffold15672 ScafM INDEL 0004.scaffold00019 557836 2 GC .. scaffold15672 ScafM SNP 0004.scaffold00019 557839 1 A G scaffold15672 ScafM INDEL 0004.scaffold00019 557842 1 G . scaffold15672 ScafM INDEL 0004.scaffold00019 557844 1 A . scaffold15672 ScafM INDEL 0004.scaffold00019 557847 3 ATG ... scaffold15672 ScafM INDEL 0004.scaffold00019 557853 1 C . scaffold15672 ScafM SNP 0004.scaffold00019 557859 1 T C scaffold15672 Both SNP 0004.scaffold00019 557901 1 C G scaffold15672 Both SNP 0004.scaffold00019 557912 1 G A scaffold15672 Both SNP 0004.scaffold00019 558002 1 A C scaffold15672 Both SNP 0004.scaffold00019 558086 1 C G scaffold15672 Both SNP 0004.scaffold00019 558107 1 G T scaffold15672 Both SNP 0004.scaffold00019 558119 1 G C scaffold15672 ScafM SNP 0004.scaffold00019 558351 1 C T scaffold15672 Both SNP 0004.scaffold00019 558357 1 A G scaffold15672 Both SNP 0004.scaffold00019 558395 1 G C scaffold15672 Both SNP 0004.scaffold00019 558437 1 C T scaffold15672 Both SNP 0004.scaffold00019 558478 1 T A scaffold15672 Both INDEL 0004.scaffold00019 558514 1 G . scaffold15672 Both SNP 0004.scaffold00019 558529 1 A G scaffold15672 Both SNP 0004.scaffold00019 558584 1 A G scaffold15672 Both SNP 0004.scaffold00019 558619 1 C T scaffold15672 ReadM SNP 0004.scaffold00019 558663 1 C T - ReadM SNP 0004.scaffold00019 558717 1 T A - Both SNP 0004.scaffold00019 558799 1 G T scaffold15672 Both SNP 0004.scaffold00019 558896 1 T C scaffold15672 Both SNP 0004.scaffold00019 559000 1 G A scaffold15672 ReadM SNP 0004.scaffold00019 559138 1 A G - ReadM SNP 0004.scaffold00019 559322 1 A C - ReadM SNP 0004.scaffold00019 559373 1 T C - ReadM SNP 0004.scaffold00019 559567 1 A C - ScafM SNP 0004.scaffold00019 559583 2 CG TA scaffold15672 ScafM INDEL 0004.scaffold00019 559587 1 . A scaffold15672 Both SNP 0004.scaffold00019 559718 1 A T scaffold15672 Both SNP 0004.scaffold00019 559750 1 A C scaffold15672 ScafM SNP 0004.scaffold00019 559832 1 G C scaffold15672 ScafM SNP 0004.scaffold00019 559834 1 C A scaffold15672 Both SNP 0004.scaffold00019 559955 1 A G scaffold15672 Both SNP 0004.scaffold00019 560018 1 A G scaffold15672 Both SNP 0004.scaffold00019 560069 1 C T scaffold15672 Both SNP 0004.scaffold00019 560117 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 560130 1 T A scaffold15672 Both SNP 0004.scaffold00019 560152 1 G T scaffold15672 Both SNP 0004.scaffold00019 560160 1 C T scaffold15672 Both SNP 0004.scaffold00019 560179 1 T C scaffold15672 Both SNP 0004.scaffold00019 560337 1 T A scaffold15672 Both SNP 0004.scaffold00019 560457 1 T G scaffold15672 ScafM SNP 0004.scaffold00019 560609 2 TC AG scaffold15672 ReadM SNP 0004.scaffold00019 560690 1 C T - ReadM SNP 0004.scaffold00019 560787 1 G A - ScafM SNP 0004.scaffold00019 560946 2 AC GA scaffold15672 Both SNP 0004.scaffold00019 561043 1 T C scaffold15672 ReadM SNP 0004.scaffold00019 561059 1 T C - ReadM SNP 0004.scaffold00019 561115 1 T G - ReadM SNP 0004.scaffold00019 561123 1 C T - ReadM SNP 0004.scaffold00019 561147 1 G A - ScafM INDEL 0004.scaffold00019 561209 3 ... ATT scaffold15672 ScafM SNP 0004.scaffold00019 561212 1 C A scaffold15672 ScafM INDEL 0004.scaffold00019 561213 2 .. AA scaffold15672 ScafM INDEL 0004.scaffold00019 561214 3 ... AGA scaffold15672 ScafM SNP 0004.scaffold00019 561216 1 C G scaffold15672 ScafM SNP 0004.scaffold00019 561219 2 CT TG scaffold15672 ScafM SNP 0004.scaffold00019 561224 1 T G scaffold15672 ScafM SNP 0004.scaffold00019 561227 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 561230 1 C A scaffold15672 ScafM INDEL 0004.scaffold00019 561231 2 .. GA scaffold15672 ScafM INDEL 0004.scaffold00019 561232 1 . A scaffold15672 ScafM SNP 0004.scaffold00019 561235 1 C A scaffold15672 ScafM SNP 0004.scaffold00019 561237 3 TGA CCC scaffold15672 ScafM INDEL 0004.scaffold00019 561242 2 TT .A scaffold15672 ScafM INDEL 0004.scaffold00019 561250 3 ... ATG scaffold15672 ScafM INDEL 0004.scaffold00019 561252 5 ..... GCCCA scaffold15672 ScafM SNP 0004.scaffold00019 561258 1 A C scaffold15672 ReadM SNP 0004.scaffold00019 561712 1 C T - ScafM SNP 0004.scaffold00019 561994 1 T G scaffold15672 Both SNP 0004.scaffold00019 562027 1 T G scaffold15672 Both INDEL 0004.scaffold00019 562034 2 AT .. scaffold15672 ReadM SNP 0004.scaffold00019 562159 1 T C - ReadM SNP 0004.scaffold00019 562304 1 A T - ReadM SNP 0004.scaffold00019 562464 1 C T - ReadM SNP 0004.scaffold00019 562518 1 G T - ReadM SNP 0004.scaffold00019 562751 1 G A - ReadM SNP 0004.scaffold00019 562821 1 A T - ReadM SNP 0004.scaffold00019 562837 1 G A - ReadM SNP 0004.scaffold00019 562937 1 T A - ReadM SNP 0004.scaffold00019 562967 1 C T - ReadM SNP 0004.scaffold00019 563112 1 C T - ReadM SNP 0004.scaffold00019 563249 1 G A - ReadM SNP 0004.scaffold00019 563407 1 A G - ReadM SNP 0004.scaffold00019 563436 1 C T - ReadM SNP 0004.scaffold00019 563446 1 A T - ScafM INDEL 0004.scaffold00019 563497 9 TAGTGGAAA ......... scaffold15672 Both SNP 0004.scaffold00019 563543 1 C A scaffold15672 Both SNP 0004.scaffold00019 563569 1 C T scaffold15672 Both SNP 0004.scaffold00019 563571 1 A G scaffold15672 Both SNP 0004.scaffold00019 563688 1 T G scaffold15672 Both SNP 0004.scaffold00019 563705 1 T G scaffold15672 Both SNP 0004.scaffold00019 563869 1 T C scaffold15672 Both SNP 0004.scaffold00019 563903 1 T C scaffold15672 Both SNP 0004.scaffold00019 563944 1 C T scaffold15672 ReadM INDEL 0004.scaffold00019 563969 2 .. TT - ReadM SNP 0004.scaffold00019 564017 1 T C - ReadM SNP 0004.scaffold00019 564176 1 G A - ReadM SNP 0004.scaffold00019 564214 1 G A - ReadM SNP 0004.scaffold00019 564225 1 T A - ReadM SNP 0004.scaffold00019 564289 1 G T - ReadM SNP 0004.scaffold00019 564378 1 T C - ReadM SNP 0004.scaffold00019 564419 1 C G - ReadM SNP 0004.scaffold00019 564460 1 T C - ReadM SNP 0004.scaffold00019 564574 1 C T - ReadM SNP 0004.scaffold00019 564579 1 T C - ReadM SNP 0004.scaffold00019 564675 1 T C - ReadM SNP 0004.scaffold00019 564686 1 C G - ReadM SNP 0004.scaffold00019 564764 1 T A - ReadM SNP 0004.scaffold00019 564813 1 C A - ReadM SNP 0004.scaffold00019 564932 1 A G - ReadM SNP 0004.scaffold00019 564939 1 T C - ReadM SNP 0004.scaffold00019 564984 1 G T - ReadM SNP 0004.scaffold00019 565022 1 A C - Both SNP 0004.scaffold00019 565086 1 A G scaffold15672 Both SNP 0004.scaffold00019 565183 1 G A scaffold15672 Both SNP 0004.scaffold00019 565240 1 C G scaffold15672 Both SNP 0004.scaffold00019 565255 1 T G scaffold15672 Both SNP 0004.scaffold00019 565280 1 A T scaffold15672 ReadM SNP 0004.scaffold00019 565339 1 A G - ReadM SNP 0004.scaffold00019 565456 1 A C - ReadM SNP 0004.scaffold00019 565464 1 C T - ReadM SNP 0004.scaffold00019 565487 1 G A - ReadM SNP 0004.scaffold00019 565530 1 G A - ReadM SNP 0004.scaffold00019 565548 1 A T - ReadM SNP 0004.scaffold00019 565567 1 C A - ReadM SNP 0004.scaffold00019 565653 1 C A - ReadM SNP 0004.scaffold00019 565663 1 T C - ReadM INDEL 0004.scaffold00019 565715 1 . T - ReadM SNP 0004.scaffold00019 565746 1 C A - ReadM SNP 0004.scaffold00019 565780 1 G C - ReadM SNP 0004.scaffold00019 565809 1 G A - ReadM SNP 0004.scaffold00019 565822 1 G A - ReadM SNP 0004.scaffold00019 565854 1 G T - ReadM SNP 0004.scaffold00019 565924 1 G A - ReadM SNP 0004.scaffold00019 566013 1 T A - ReadM SNP 0004.scaffold00019 566092 1 T C - ReadM INDEL 0004.scaffold00019 566162 1 . A - ReadM SNP 0004.scaffold00019 566342 1 A G - ReadM SNP 0004.scaffold00019 566369 1 T C - ReadM SNP 0004.scaffold00019 566430 1 T G - ReadM SNP 0004.scaffold00019 566579 1 C T - ReadM SNP 0004.scaffold00019 566682 1 A G - ReadM SNP 0004.scaffold00019 566833 1 C A - ReadM INDEL 0004.scaffold00019 566894 3 ... ATT - ReadM SNP 0004.scaffold00019 566963 1 G A - ReadM SNP 0004.scaffold00019 567016 1 C T - ReadM SNP 0004.scaffold00019 567058 1 G A - ReadM SNP 0004.scaffold00019 567103 1 A T - ReadM SNP 0004.scaffold00019 567106 1 A G - ReadM SNP 0004.scaffold00019 567184 1 G C - ReadM SNP 0004.scaffold00019 567274 1 G T - ReadM SNP 0004.scaffold00019 567385 1 A C - ReadM SNP 0004.scaffold00019 567482 1 A G - ReadM SNP 0004.scaffold00019 567594 1 T C - ReadM SNP 0004.scaffold00019 567601 1 C T - ReadM SNP 0004.scaffold00019 567623 1 C T - ReadM SNP 0004.scaffold00019 567669 1 G A - ReadM SNP 0004.scaffold00019 567783 1 A G - ReadM SNP 0004.scaffold00019 567963 1 A G - ReadM SNP 0004.scaffold00019 568026 1 A G - ReadM SNP 0004.scaffold00019 568128 1 T C - ReadM SNP 0004.scaffold00019 568296 1 T C - ReadM SNP 0004.scaffold00019 568539 1 C G - ReadM SNP 0004.scaffold00019 568714 1 T A - ReadM SNP 0004.scaffold00019 568840 1 G A - ReadM SNP 0004.scaffold00019 568868 1 C G - ReadM SNP 0004.scaffold00019 568910 1 A G - ReadM SNP 0004.scaffold00019 569088 1 C A - ReadM SNP 0004.scaffold00019 569201 1 T C - ReadM SNP 0004.scaffold00019 569293 1 C G - ReadM SNP 0004.scaffold00019 569364 1 T C - ReadM SNP 0004.scaffold00019 569392 1 T A - ReadM SNP 0004.scaffold00019 569437 1 G C - ReadM SNP 0004.scaffold00019 569460 1 A G - ReadM SNP 0004.scaffold00019 569473 1 G A - ReadM SNP 0004.scaffold00019 569535 1 G C - ReadM SNP 0004.scaffold00019 569539 1 A G - ReadM SNP 0004.scaffold00019 569558 1 G A - ReadM SNP 0004.scaffold00019 569709 1 A C - ReadM SNP 0004.scaffold00019 569840 1 A C - ReadM SNP 0004.scaffold00019 569919 1 G A - ReadM SNP 0004.scaffold00019 569963 1 C T - ReadM SNP 0004.scaffold00019 570015 1 C T - ReadM SNP 0004.scaffold00019 570161 1 G T - ReadM SNP 0004.scaffold00019 570244 1 A T - ReadM SNP 0004.scaffold00019 570398 1 G T - ReadM SNP 0004.scaffold00019 570425 1 C T - ReadM SNP 0004.scaffold00019 570455 1 G A - ReadM INDEL 0004.scaffold00019 570494 1 A . - ReadM SNP 0004.scaffold00019 570548 1 A C - ReadM SNP 0004.scaffold00019 570581 1 C A - ReadM SNP 0004.scaffold00019 570744 1 T C - ReadM SNP 0004.scaffold00019 574605 1 T C - ReadM SNP 0004.scaffold00019 574659 1 A C - ReadM SNP 0004.scaffold00019 574665 1 A G - ReadM SNP 0004.scaffold00019 574781 1 A C - ReadM SNP 0004.scaffold00019 574808 1 T G - ReadM SNP 0004.scaffold00019 574820 1 A G - ReadM SNP 0004.scaffold00019 575014 1 C T - ReadM SNP 0004.scaffold00019 575090 1 G C - ReadM SNP 0004.scaffold00019 575208 1 T A - ReadM SNP 0004.scaffold00019 575315 1 G C - ReadM SNP 0004.scaffold00019 575443 1 C A - ReadM SNP 0004.scaffold00019 575490 1 A T - ReadM SNP 0004.scaffold00019 575511 1 G A - ReadM SNP 0004.scaffold00019 575648 1 T G - ReadM SNP 0004.scaffold00019 575686 1 T A - ReadM SNP 0004.scaffold00019 575706 1 T C - Both SNP 0004.scaffold00019 575818 1 C G scaffold15672 Both SNP 0004.scaffold00019 575976 1 T G scaffold15672 Both SNP 0004.scaffold00019 576093 1 C G scaffold15672 ScafM SNP 0004.scaffold00019 576215 1 A G scaffold15672 ScafM SNP 0004.scaffold00019 576243 1 T G scaffold15672 ScafM SNP 0004.scaffold00019 576622 1 C T scaffold15672 ScafM INDEL 0004.scaffold00019 576946 1 . A scaffold15672 ScafM SNP 0004.scaffold00019 576948 1 C A scaffold15672 Both SNP 0004.scaffold00019 577012 1 G A scaffold15672 Both INDEL 0004.scaffold00019 577025 1 A . scaffold15672 Both SNP 0004.scaffold00019 577292 1 C T scaffold15672 Both SNP 0004.scaffold00019 577489 1 T C scaffold15672 Both SNP 0004.scaffold00019 577571 1 C A scaffold15672 ScafM INDEL 0004.scaffold00019 577853 4 ATAT .... scaffold15672 Both SNP 0004.scaffold00019 577876 1 G A scaffold15672 Both SNP 0004.scaffold00019 577956 1 T G scaffold15672 ReadM SNP 0004.scaffold00019 578287 1 T C - ReadM SNP 0004.scaffold00019 578359 1 C T - ReadM SNP 0004.scaffold00019 578504 1 G A - ReadM SNP 0004.scaffold00019 578523 1 A G - ReadM SNP 0004.scaffold00019 578537 1 A G - ReadM SNP 0004.scaffold00019 578603 1 T C - ReadM SNP 0004.scaffold00019 578614 1 G A - ReadM SNP 0004.scaffold00019 578616 1 G A - Both SNP 0004.scaffold00019 578706 1 A C scaffold15672 ReadM SNP 0004.scaffold00019 578758 1 A G - ReadM SNP 0004.scaffold00019 578778 1 C T - ReadM INDEL 0004.scaffold00019 578802 1 G . - ReadM SNP 0004.scaffold00019 578815 1 G T - ReadM INDEL 0004.scaffold00019 578875 1 C . - ReadM SNP 0004.scaffold00019 578880 1 G C - ReadM SNP 0004.scaffold00019 578922 1 C G - ReadM SNP 0004.scaffold00019 578933 1 G A - ReadM SNP 0004.scaffold00019 578955 1 T C - ReadM SNP 0004.scaffold00019 579020 1 G A - ReadM SNP 0004.scaffold00019 579167 1 A C - ReadM SNP 0004.scaffold00019 579169 1 T C - ReadM SNP 0004.scaffold00019 579240 1 A G - ReadM SNP 0004.scaffold00019 579252 1 A C - ReadM SNP 0004.scaffold00019 579294 1 T G - ScafM SNP 0004.scaffold00019 579424 1 T C scaffold15672 ScafM SNP 0004.scaffold00019 579447 1 T A scaffold15672 ScafM SNP 0004.scaffold00019 579452 1 T G scaffold15672 ScafM SNP 0004.scaffold00019 579460 1 C T scaffold15672 ScafM SNP 0004.scaffold00019 579642 1 C T scaffold15672 Both SNP 0004.scaffold00019 579671 1 T C scaffold15672 Both SNP 0004.scaffold00019 579688 1 A C scaffold15672 Both SNP 0004.scaffold00019 579738 1 C G scaffold15672 ScafM INDEL 0004.scaffold00019 580744 1 A . scaffold22910 ScafM SNP 0004.scaffold00019 580759 1 C A scaffold22910 ScafM SNP 0004.scaffold00019 580793 1 C T scaffold22910 ScafM SNP 0004.scaffold00019 580803 1 A T scaffold22910 ScafM SNP 0004.scaffold00019 580827 1 G A scaffold22910 ScafM SNP 0004.scaffold00019 580830 1 T C scaffold22910 ScafM SNP 0004.scaffold00019 580849 1 C T scaffold22910 Both SNP 0004.scaffold00019 580901 1 C T scaffold22910 Both SNP 0004.scaffold00019 580913 1 C T scaffold22910 Both SNP 0004.scaffold00019 580962 1 A G scaffold22910 Both SNP 0004.scaffold00019 581007 1 A C scaffold22910 ReadM SNP 0004.scaffold00019 581051 1 T C - ReadM SNP 0004.scaffold00019 581054 1 T C - ScafM SNP 0004.scaffold00019 581333 1 T G scaffold22910 ReadM SNP 0004.scaffold00019 581513 1 T C - ReadM SNP 0004.scaffold00019 581516 1 T C - ReadM SNP 0004.scaffold00019 581556 1 C T - ReadM SNP 0004.scaffold00019 581619 1 T G - ReadM INDEL 0004.scaffold00019 581623 1 T . - Both SNP 0004.scaffold00019 581665 1 T A scaffold22910 Both SNP 0004.scaffold00019 581708 1 A T scaffold22910 ScafM SNP 0004.scaffold00019 581744 1 G A scaffold22910 ScafM SNP 0004.scaffold00019 581746 1 A G scaffold22910 ScafM SNP 0004.scaffold00019 581803 1 G A scaffold22910 ScafM SNP 0004.scaffold00019 581826 1 G T scaffold22910 ScafM SNP 0004.scaffold00019 581850 1 T C scaffold22910 ReadM SNP 0004.scaffold00019 581939 1 C T - ReadM SNP 0004.scaffold00019 582010 1 T A - Both SNP 0004.scaffold00019 582050 1 T C scaffold22910 ScafM SNP 0004.scaffold00019 582073 1 T G scaffold22910 ReadM SNP 0004.scaffold00019 582407 1 T A - ReadM SNP 0004.scaffold00019 582426 1 G A - ReadM SNP 0004.scaffold00019 582543 1 G T - ReadM SNP 0004.scaffold00019 582550 1 G A - ReadM SNP 0004.scaffold00019 582760 1 G T - ReadM SNP 0004.scaffold00019 582820 1 A G - ReadM SNP 0004.scaffold00019 582829 1 A G - ReadM SNP 0004.scaffold00019 582937 1 G A - ReadM SNP 0004.scaffold00019 583026 1 G T - ReadM SNP 0004.scaffold00019 583044 1 T A - ReadM SNP 0004.scaffold00019 583074 1 T C - ReadM SNP 0004.scaffold00019 583109 1 T C - ReadM SNP 0004.scaffold00019 583170 1 A T - ReadM SNP 0004.scaffold00019 583174 1 T A - ReadM SNP 0004.scaffold00019 583433 1 C T - ReadM SNP 0004.scaffold00019 583469 1 C G - ReadM SNP 0004.scaffold00019 583992 1 C A - ReadM SNP 0004.scaffold00019 584069 1 C T - ReadM SNP 0004.scaffold00019 584168 1 T A - ReadM SNP 0004.scaffold00019 584186 1 T A - ReadM SNP 0004.scaffold00019 584239 1 C T - ReadM SNP 0004.scaffold00019 584290 1 A G - ReadM SNP 0004.scaffold00019 584311 1 T A - ReadM SNP 0004.scaffold00019 584332 1 G A - ReadM SNP 0004.scaffold00019 584402 1 A C - ReadM SNP 0004.scaffold00019 584436 1 T C - ReadM SNP 0004.scaffold00019 584438 1 T A - ReadM SNP 0004.scaffold00019 584467 1 G T - ReadM SNP 0004.scaffold00019 584499 1 T C - ReadM SNP 0004.scaffold00019 584554 1 A G - ReadM SNP 0004.scaffold00019 584719 1 A G - ReadM SNP 0004.scaffold00019 584939 1 T G - ReadM SNP 0004.scaffold00019 584948 1 T C - ReadM SNP 0004.scaffold00019 584998 1 C T - ReadM SNP 0004.scaffold00019 585148 1 T C - ReadM SNP 0004.scaffold00019 585369 1 C G - ReadM SNP 0004.scaffold00019 585390 1 T C - ReadM SNP 0004.scaffold00019 586232 1 G C - ReadM SNP 0004.scaffold00019 586242 1 A T - ReadM SNP 0004.scaffold00019 586262 1 G A - ReadM SNP 0004.scaffold00019 586406 1 G C - ReadM SNP 0004.scaffold00019 586458 1 T A - ReadM SNP 0004.scaffold00019 586479 1 G A - ReadM SNP 0004.scaffold00019 586589 1 A T - ReadM SNP 0004.scaffold00019 586670 1 A G - ReadM SNP 0004.scaffold00019 586746 1 A T - ReadM SNP 0004.scaffold00019 586772 1 G A - ReadM SNP 0004.scaffold00019 586837 1 G A - ReadM SNP 0004.scaffold00019 586959 1 G C - ReadM SNP 0004.scaffold00019 587164 1 A G - ReadM SNP 0004.scaffold00019 587313 1 C T - ReadM SNP 0004.scaffold00019 587384 1 T G - ReadM SNP 0004.scaffold00019 587411 1 G T - ReadM SNP 0004.scaffold00019 587509 1 C T - ReadM SNP 0004.scaffold00019 587555 1 T C - ReadM SNP 0004.scaffold00019 587570 1 G A - ReadM SNP 0004.scaffold00019 587700 1 T A - ReadM SNP 0004.scaffold00019 587705 1 G A - ReadM SNP 0004.scaffold00019 587732 1 A T - ReadM SNP 0004.scaffold00019 587785 1 A C - ReadM SNP 0004.scaffold00019 587806 1 C A - ReadM SNP 0004.scaffold00019 587812 1 G A - ReadM SNP 0004.scaffold00019 587874 1 T C - ReadM SNP 0004.scaffold00019 588072 1 G T - ReadM SNP 0004.scaffold00019 588094 1 G A - ReadM SNP 0004.scaffold00019 588163 1 G A - ReadM SNP 0004.scaffold00019 588204 1 G A - ReadM SNP 0004.scaffold00019 588223 1 A G - ReadM SNP 0004.scaffold00019 588355 1 T G - ReadM SNP 0004.scaffold00019 588376 1 T C - ReadM SNP 0004.scaffold00019 588451 1 A G - ReadM SNP 0004.scaffold00019 588487 1 G A - ReadM SNP 0004.scaffold00019 588564 1 C T - ReadM SNP 0004.scaffold00019 588588 1 T C - ReadM SNP 0004.scaffold00019 588641 1 C A - ReadM SNP 0004.scaffold00019 588693 1 A T - ReadM SNP 0004.scaffold00019 588727 1 G A - ReadM SNP 0004.scaffold00019 588770 1 T G - ReadM SNP 0004.scaffold00019 588836 1 C T - ReadM SNP 0004.scaffold00019 588844 1 A G - ReadM SNP 0004.scaffold00019 588992 1 A T - ReadM SNP 0004.scaffold00019 589088 1 A T - ReadM SNP 0004.scaffold00019 589132 1 A G - ReadM SNP 0004.scaffold00019 589191 1 G A - ReadM SNP 0004.scaffold00019 589237 1 T A - ReadM SNP 0004.scaffold00019 589265 1 T C - ReadM SNP 0004.scaffold00019 589284 1 T G - ReadM SNP 0004.scaffold00019 589307 1 T C - ReadM SNP 0004.scaffold00019 589427 1 T A - ReadM SNP 0004.scaffold00019 589536 1 C T - ReadM SNP 0004.scaffold00019 589579 1 G T - ReadM SNP 0004.scaffold00019 589661 1 G C - ReadM SNP 0004.scaffold00019 589733 1 G C - ReadM SNP 0004.scaffold00019 589947 1 G T - ReadM SNP 0004.scaffold00019 589959 1 C T - ReadM SNP 0004.scaffold00019 590031 1 C T - ReadM SNP 0004.scaffold00019 590100 1 C A - ReadM SNP 0004.scaffold00019 590113 1 T G - ReadM SNP 0004.scaffold00019 590139 1 G A - ReadM SNP 0004.scaffold00019 590207 1 A C - ReadM SNP 0004.scaffold00019 590216 1 T C - ReadM SNP 0004.scaffold00019 590279 1 C T - ReadM SNP 0004.scaffold00019 590286 1 T C - ReadM SNP 0004.scaffold00019 590353 1 A C - ReadM SNP 0004.scaffold00019 590427 1 G A - ReadM SNP 0004.scaffold00019 590472 1 G C - ReadM SNP 0004.scaffold00019 590476 1 G A - ReadM SNP 0004.scaffold00019 590480 1 T A - ReadM SNP 0004.scaffold00019 590573 1 T C - ReadM SNP 0004.scaffold00019 590581 1 A G - ReadM SNP 0004.scaffold00019 590649 1 G T - ReadM SNP 0004.scaffold00019 590741 1 C A - ReadM SNP 0004.scaffold00019 590863 1 G C - ReadM SNP 0004.scaffold00019 590918 1 A G - ReadM SNP 0004.scaffold00019 591016 1 C T - ReadM SNP 0004.scaffold00019 591034 1 C A - ReadM SNP 0004.scaffold00019 591064 1 C T - ReadM SNP 0004.scaffold00019 591100 1 A C - ReadM SNP 0004.scaffold00019 591139 1 G A - ReadM SNP 0004.scaffold00019 591241 1 G C - ReadM SNP 0004.scaffold00019 591243 1 G C - ReadM SNP 0004.scaffold00019 591270 1 A G - ReadM SNP 0004.scaffold00019 591545 1 G C - ReadM SNP 0004.scaffold00019 591610 1 C T - ReadM SNP 0004.scaffold00019 591706 2 AA GG - ReadM SNP 0004.scaffold00019 591808 1 C T - ReadM SNP 0004.scaffold00019 591811 1 C G - ReadM SNP 0004.scaffold00019 591856 1 T C - ReadM SNP 0004.scaffold00019 591863 1 A G - ReadM SNP 0004.scaffold00019 591900 1 G A - ReadM SNP 0004.scaffold00019 591960 1 C T - ReadM SNP 0004.scaffold00019 591963 1 C T - ReadM SNP 0004.scaffold00019 592165 1 T G - ReadM SNP 0004.scaffold00019 592199 1 A G - ReadM SNP 0004.scaffold00019 592246 1 C T - ReadM SNP 0004.scaffold00019 592287 1 C A - ReadM INDEL 0004.scaffold00019 592345 1 . A - ReadM SNP 0004.scaffold00019 592369 1 C T - ReadM SNP 0004.scaffold00019 592412 1 T G - ReadM SNP 0004.scaffold00019 592447 1 T C - ReadM SNP 0004.scaffold00019 592477 1 C T - ReadM SNP 0004.scaffold00019 592492 1 A G - ReadM SNP 0004.scaffold00019 592507 1 A G - ReadM SNP 0004.scaffold00019 592559 1 C A - ReadM SNP 0004.scaffold00019 592582 1 A C - ReadM SNP 0004.scaffold00019 592600 1 G A - ReadM SNP 0004.scaffold00019 592824 1 C G - ReadM SNP 0004.scaffold00019 592831 1 C T - ReadM SNP 0004.scaffold00019 593038 1 G A - ReadM SNP 0004.scaffold00019 593166 1 G A - ReadM SNP 0004.scaffold00019 593210 1 G A - ReadM SNP 0004.scaffold00019 593229 1 G A - ReadM SNP 0004.scaffold00019 593239 1 G A - ReadM SNP 0004.scaffold00019 593314 1 C A - ReadM SNP 0004.scaffold00019 593361 1 A G - ReadM SNP 0004.scaffold00019 593393 1 T C - ReadM SNP 0004.scaffold00019 593399 1 T C - ReadM SNP 0004.scaffold00019 593570 1 G T - ReadM SNP 0004.scaffold00019 593601 1 T C - ReadM SNP 0004.scaffold00019 593703 1 T A - ReadM SNP 0004.scaffold00019 593754 1 T C - ReadM SNP 0004.scaffold00019 593846 1 G A - ReadM SNP 0004.scaffold00019 593857 1 T G - ReadM SNP 0004.scaffold00019 593874 1 T C - ReadM SNP 0004.scaffold00019 593943 1 G A - ReadM SNP 0004.scaffold00019 594002 1 A G - ReadM SNP 0004.scaffold00019 594041 1 T C - ReadM SNP 0004.scaffold00019 594099 1 C T - ReadM SNP 0004.scaffold00019 594147 1 C T - ReadM SNP 0004.scaffold00019 594154 1 G C - ReadM SNP 0004.scaffold00019 594159 1 T A - ReadM SNP 0004.scaffold00019 594225 1 A C - ReadM SNP 0004.scaffold00019 594228 1 A G - ReadM SNP 0004.scaffold00019 594230 1 A G - ReadM SNP 0004.scaffold00019 594383 1 A G - ReadM SNP 0004.scaffold00019 594389 1 A G - ReadM SNP 0004.scaffold00019 594394 1 T C - ReadM SNP 0004.scaffold00019 594489 1 A G - ReadM SNP 0004.scaffold00019 594599 1 T C - ReadM SNP 0004.scaffold00019 594607 1 C G - ReadM SNP 0004.scaffold00019 594695 1 C T - ReadM SNP 0004.scaffold00019 594819 1 T A - ReadM SNP 0004.scaffold00019 594844 1 C T - ReadM SNP 0004.scaffold00019 594955 1 T C - ReadM SNP 0004.scaffold00019 594973 1 G T - ReadM SNP 0004.scaffold00019 594989 1 T C - ReadM SNP 0004.scaffold00019 595009 1 T G - ReadM SNP 0004.scaffold00019 595132 1 A T - ReadM SNP 0004.scaffold00019 595158 1 G A - ReadM SNP 0004.scaffold00019 595454 1 G A - Both SNP 0004.scaffold00019 595481 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 595522 1 T A scaffold5689 Both SNP 0004.scaffold00019 595603 1 T G scaffold5689 Both SNP 0004.scaffold00019 595646 1 G A scaffold5689 ReadM SNP 0004.scaffold00019 595657 1 G T - ReadM SNP 0004.scaffold00019 595680 1 G A - ReadM SNP 0004.scaffold00019 595761 1 T G - ReadM SNP 0004.scaffold00019 595886 1 T A - ReadM SNP 0004.scaffold00019 595907 1 T A - ReadM SNP 0004.scaffold00019 595917 1 A G - ReadM SNP 0004.scaffold00019 596052 1 A T - ReadM SNP 0004.scaffold00019 596088 1 C T - ReadM SNP 0004.scaffold00019 596115 1 A G - ReadM SNP 0004.scaffold00019 596162 1 T C - ReadM SNP 0004.scaffold00019 596206 1 A G - ReadM SNP 0004.scaffold00019 596259 1 T A - Both SNP 0004.scaffold00019 596284 1 G T scaffold5689 Both SNP 0004.scaffold00019 596317 1 T G scaffold5689 Both SNP 0004.scaffold00019 596321 1 G C scaffold5689 Both SNP 0004.scaffold00019 596332 1 T C scaffold5689 Both INDEL 0004.scaffold00019 596465 1 A . scaffold5689 Both SNP 0004.scaffold00019 596490 1 A C scaffold5689 Both SNP 0004.scaffold00019 596531 1 T C scaffold5689 Both SNP 0004.scaffold00019 596567 1 T G scaffold5689 Both SNP 0004.scaffold00019 596573 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 596631 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 596649 2 TA CC scaffold5689 ReadM SNP 0004.scaffold00019 596681 1 T C - ReadM SNP 0004.scaffold00019 596707 1 A G - ReadM SNP 0004.scaffold00019 596729 1 C T - ReadM INDEL 0004.scaffold00019 596808 1 C . - ReadM SNP 0004.scaffold00019 597001 1 A G - ReadM SNP 0004.scaffold00019 597021 1 C T - ReadM SNP 0004.scaffold00019 597110 1 A C - ReadM SNP 0004.scaffold00019 597197 1 G A - ReadM SNP 0004.scaffold00019 597418 1 C T - ReadM SNP 0004.scaffold00019 597573 1 C A - ReadM SNP 0004.scaffold00019 597610 1 A G - ReadM SNP 0004.scaffold00019 597686 1 G A - ReadM SNP 0004.scaffold00019 597733 1 C T - Both SNP 0004.scaffold00019 597801 1 T A scaffold5689 Both SNP 0004.scaffold00019 597926 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 597932 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 598261 1 A T scaffold5689 ScafM SNP 0004.scaffold00019 598349 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 598369 1 C A scaffold5689 ScafM SNP 0004.scaffold00019 598443 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 598534 1 T G scaffold5689 Both SNP 0004.scaffold00019 598541 1 C T scaffold5689 Both SNP 0004.scaffold00019 598576 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 598632 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 598647 1 A T scaffold5689 ScafM INDEL 0004.scaffold00019 598674 3 AAA ... scaffold5689 ScafM SNP 0004.scaffold00019 598684 1 G A scaffold5689 Both SNP 0004.scaffold00019 598785 1 T G scaffold5689 Both SNP 0004.scaffold00019 598840 1 A C scaffold5689 Both SNP 0004.scaffold00019 598870 1 A G scaffold5689 Both SNP 0004.scaffold00019 598879 1 C A scaffold5689 Both SNP 0004.scaffold00019 598903 1 G C scaffold5689 Both SNP 0004.scaffold00019 598956 1 A C scaffold5689 Both SNP 0004.scaffold00019 598982 1 A G scaffold5689 Both SNP 0004.scaffold00019 598986 1 G A scaffold5689 Both SNP 0004.scaffold00019 599025 1 G A scaffold5689 Both SNP 0004.scaffold00019 599080 1 G A scaffold5689 Both SNP 0004.scaffold00019 599113 1 C T scaffold5689 Both SNP 0004.scaffold00019 599215 1 C T scaffold5689 Both SNP 0004.scaffold00019 599224 1 C T scaffold5689 Both SNP 0004.scaffold00019 599226 1 A G scaffold5689 Both SNP 0004.scaffold00019 599272 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 599317 1 A G scaffold5689 ScafM INDEL 0004.scaffold00019 599321 2 .. GA scaffold5689 ReadM SNP 0004.scaffold00019 599441 1 G A - ScafM INDEL 0004.scaffold00019 599566 1 G . scaffold5689 ScafM SNP 0004.scaffold00019 599593 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 599595 1 G A scaffold5689 Both SNP 0004.scaffold00019 599649 1 T A scaffold5689 Both SNP 0004.scaffold00019 599667 1 A C scaffold5689 Both SNP 0004.scaffold00019 599751 1 C A scaffold5689 Both SNP 0004.scaffold00019 599811 1 G T scaffold5689 Both SNP 0004.scaffold00019 599815 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 599855 2 AA GG scaffold5689 ScafM SNP 0004.scaffold00019 599872 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 599904 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 599921 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 599926 2 TT AC scaffold5689 Both SNP 0004.scaffold00019 599975 1 C T scaffold5689 Both SNP 0004.scaffold00019 599984 1 T A scaffold5689 Both SNP 0004.scaffold00019 600043 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 600078 1 C A scaffold5689 Both SNP 0004.scaffold00019 600084 1 T C scaffold5689 Both SNP 0004.scaffold00019 600091 1 C T scaffold5689 Both SNP 0004.scaffold00019 600171 1 G T scaffold5689 Both SNP 0004.scaffold00019 600210 1 C A scaffold5689 Both SNP 0004.scaffold00019 600295 1 A G scaffold5689 Both SNP 0004.scaffold00019 600300 1 G A scaffold5689 Both SNP 0004.scaffold00019 600336 1 T G scaffold5689 Both SNP 0004.scaffold00019 600342 1 G A scaffold5689 ReadM SNP 0004.scaffold00019 600477 1 A T - ReadM SNP 0004.scaffold00019 602168 1 G A - ReadM SNP 0004.scaffold00019 602185 1 G A - ReadM SNP 0004.scaffold00019 602438 1 C T - ReadM SNP 0004.scaffold00019 603048 1 C T - ReadM SNP 0004.scaffold00019 603161 1 C T - ReadM SNP 0004.scaffold00019 603313 1 G A - ReadM SNP 0004.scaffold00019 603340 1 C T - ScafM SNP 0004.scaffold00019 603389 1 A T scaffold5689 ScafM SNP 0004.scaffold00019 603408 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 603451 3 ATC CCT scaffold5689 ScafM SNP 0004.scaffold00019 603475 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 603502 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 603513 2 GC AA scaffold5689 ScafM INDEL 0004.scaffold00019 603555 4 TATA .... scaffold5689 ReadM SNP 0004.scaffold00019 605488 1 C G - ReadM SNP 0004.scaffold00019 605573 1 T G - ReadM SNP 0004.scaffold00019 605781 1 T C - ReadM INDEL 0004.scaffold00019 605840 3 ... TTC - ReadM SNP 0004.scaffold00019 605977 1 A G - ReadM SNP 0004.scaffold00019 606000 1 A T - ReadM SNP 0004.scaffold00019 606108 1 C A - ReadM SNP 0004.scaffold00019 606134 1 T G - ReadM SNP 0004.scaffold00019 606200 1 T C - ReadM SNP 0004.scaffold00019 606223 1 T C - ReadM SNP 0004.scaffold00019 606341 1 G A - ReadM SNP 0004.scaffold00019 606474 1 G A - ReadM SNP 0004.scaffold00019 606479 1 T C - ReadM SNP 0004.scaffold00019 606516 1 T C - ReadM SNP 0004.scaffold00019 606545 1 A G - ReadM SNP 0004.scaffold00019 606713 1 A T - ReadM SNP 0004.scaffold00019 606758 1 A T - ReadM SNP 0004.scaffold00019 606791 1 T C - ReadM SNP 0004.scaffold00019 606853 1 T A - ReadM SNP 0004.scaffold00019 606922 1 G A - ReadM SNP 0004.scaffold00019 606975 1 A C - ReadM SNP 0004.scaffold00019 607015 1 C A - ReadM SNP 0004.scaffold00019 607106 1 T C - ReadM SNP 0004.scaffold00019 607255 1 C T - ReadM SNP 0004.scaffold00019 607261 1 A G - ReadM SNP 0004.scaffold00019 607333 1 T C - ReadM SNP 0004.scaffold00019 607436 1 A G - ReadM SNP 0004.scaffold00019 607493 1 A C - ReadM SNP 0004.scaffold00019 607581 1 G A - ReadM SNP 0004.scaffold00019 607600 1 A G - ReadM SNP 0004.scaffold00019 607670 1 T C - ReadM SNP 0004.scaffold00019 607679 1 T C - ReadM SNP 0004.scaffold00019 608411 1 C T - ReadM SNP 0004.scaffold00019 608628 1 G A - ReadM SNP 0004.scaffold00019 608646 1 T G - ReadM INDEL 0004.scaffold00019 608656 1 C . - ReadM SNP 0004.scaffold00019 608707 1 T C - ReadM SNP 0004.scaffold00019 608809 1 A T - ReadM SNP 0004.scaffold00019 608814 1 G A - ReadM SNP 0004.scaffold00019 608858 1 T C - ReadM SNP 0004.scaffold00019 608961 1 G T - ReadM SNP 0004.scaffold00019 609100 1 C A - ReadM SNP 0004.scaffold00019 609120 1 G A - ReadM SNP 0004.scaffold00019 609194 1 T C - ReadM INDEL 0004.scaffold00019 609249 1 A . - ReadM SNP 0004.scaffold00019 609415 1 G C - ReadM SNP 0004.scaffold00019 609458 1 G C - ReadM SNP 0004.scaffold00019 609550 1 A C - ReadM SNP 0004.scaffold00019 609594 1 C G - ReadM SNP 0004.scaffold00019 609695 1 T C - ReadM SNP 0004.scaffold00019 609716 1 C G - ReadM SNP 0004.scaffold00019 609720 1 C T - ReadM SNP 0004.scaffold00019 609780 1 A G - ReadM SNP 0004.scaffold00019 609854 1 A G - ReadM SNP 0004.scaffold00019 610007 1 A T - ReadM SNP 0004.scaffold00019 610310 1 G A - Both SNP 0004.scaffold00019 610338 1 A C scaffold5689 ScafM SNP 0004.scaffold00019 610381 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 610397 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 610457 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 610460 1 G T scaffold5689 ScafM SNP 0004.scaffold00019 610464 1 T G scaffold5689 ScafM SNP 0004.scaffold00019 610476 1 A C scaffold5689 Both SNP 0004.scaffold00019 610545 1 G A scaffold5689 Both SNP 0004.scaffold00019 610599 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 610602 1 G C scaffold5689 Both SNP 0004.scaffold00019 610625 1 T G scaffold5689 ScafM SNP 0004.scaffold00019 610742 1 C A scaffold5689 ScafM SNP 0004.scaffold00019 610778 1 C G scaffold5689 ScafM SNP 0004.scaffold00019 610817 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 610854 1 C G scaffold5689 ScafM SNP 0004.scaffold00019 614612 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 614727 2 TG AA scaffold5689 ReadM SNP 0004.scaffold00019 615003 1 T A - ReadM SNP 0004.scaffold00019 615229 1 G T - ReadM SNP 0004.scaffold00019 616231 1 G A - ReadM SNP 0004.scaffold00019 616296 1 A G - ReadM SNP 0004.scaffold00019 616321 1 A C - ReadM SNP 0004.scaffold00019 616661 1 A G - ReadM SNP 0004.scaffold00019 616665 1 C A - ReadM SNP 0004.scaffold00019 616696 1 G A - ReadM SNP 0004.scaffold00019 616951 1 A G - ReadM SNP 0004.scaffold00019 616968 1 T C - ReadM INDEL 0004.scaffold00019 617025 1 A . - ReadM SNP 0004.scaffold00019 617152 1 C T - ReadM SNP 0004.scaffold00019 617165 1 A G - ReadM INDEL 0004.scaffold00019 617760 1 . A - ReadM SNP 0004.scaffold00019 618214 1 T C - ReadM SNP 0004.scaffold00019 618237 1 A G - ReadM SNP 0004.scaffold00019 618924 1 C T - ReadM SNP 0004.scaffold00019 618986 1 C G - ReadM SNP 0004.scaffold00019 619118 1 A G - ReadM SNP 0004.scaffold00019 619142 1 A T - ReadM SNP 0004.scaffold00019 619224 1 G A - ReadM SNP 0004.scaffold00019 619249 1 T C - ReadM SNP 0004.scaffold00019 621948 1 G A - ReadM SNP 0004.scaffold00019 622025 1 T C - ReadM SNP 0004.scaffold00019 622040 1 G C - ReadM SNP 0004.scaffold00019 622562 1 A T - ReadM SNP 0004.scaffold00019 623002 1 A G - ReadM SNP 0004.scaffold00019 623039 1 G T - ReadM SNP 0004.scaffold00019 623072 1 G T - ReadM SNP 0004.scaffold00019 623181 1 C A - ReadM SNP 0004.scaffold00019 623186 1 G A - ReadM SNP 0004.scaffold00019 623216 1 A C - ReadM SNP 0004.scaffold00019 623230 1 C A - ReadM SNP 0004.scaffold00019 623290 1 G C - ReadM SNP 0004.scaffold00019 623376 1 A T - ReadM SNP 0004.scaffold00019 623384 1 T A - ReadM SNP 0004.scaffold00019 623706 1 T C - ReadM SNP 0004.scaffold00019 623718 1 G A - ReadM SNP 0004.scaffold00019 623953 1 C T - ReadM SNP 0004.scaffold00019 623984 1 C A - ReadM SNP 0004.scaffold00019 623995 1 G T - ReadM INDEL 0004.scaffold00019 624037 1 . C - ReadM SNP 0004.scaffold00019 624144 1 A T - ReadM SNP 0004.scaffold00019 624180 1 G A - ReadM SNP 0004.scaffold00019 624264 1 T C - ReadM SNP 0004.scaffold00019 624278 1 G A - ReadM SNP 0004.scaffold00019 624309 1 A G - ReadM SNP 0004.scaffold00019 624376 1 C T - ReadM SNP 0004.scaffold00019 624461 1 G A - ReadM SNP 0004.scaffold00019 624508 1 A G - ReadM SNP 0004.scaffold00019 624512 1 T G - ReadM SNP 0004.scaffold00019 624597 1 C T - ReadM SNP 0004.scaffold00019 624642 1 A G - ReadM SNP 0004.scaffold00019 624658 1 T C - ReadM SNP 0004.scaffold00019 624735 1 G A - ReadM SNP 0004.scaffold00019 624781 1 T C - ReadM SNP 0004.scaffold00019 624797 1 C T - ReadM SNP 0004.scaffold00019 624807 1 T C - ReadM SNP 0004.scaffold00019 624818 1 T C - ReadM SNP 0004.scaffold00019 625059 1 G A - ReadM SNP 0004.scaffold00019 625062 1 A G - ReadM SNP 0004.scaffold00019 625064 1 C T - ScafM SNP 0004.scaffold00019 625152 1 G A scaffold5689 Both SNP 0004.scaffold00019 625230 1 C T scaffold5689 Both SNP 0004.scaffold00019 625322 1 T C scaffold5689 Both INDEL 0004.scaffold00019 625507 1 G . scaffold5689 Both SNP 0004.scaffold00019 625517 1 C T scaffold5689 Both SNP 0004.scaffold00019 625661 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 625771 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 625800 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 625810 1 A G scaffold5689 Both SNP 0004.scaffold00019 625895 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 625993 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 626049 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 626079 1 G T scaffold5689 ScafM SNP 0004.scaffold00019 626226 1 A T scaffold5689 Both SNP 0004.scaffold00019 626254 1 T G scaffold5689 Both SNP 0004.scaffold00019 626257 1 A G scaffold5689 ReadM SNP 0004.scaffold00019 626665 1 A G - ReadM SNP 0004.scaffold00019 626804 1 A G - ReadM SNP 0004.scaffold00019 626917 1 C T - ReadM INDEL 0004.scaffold00019 626926 1 A . - ReadM SNP 0004.scaffold00019 626953 1 G A - ReadM SNP 0004.scaffold00019 627035 1 T C - ReadM SNP 0004.scaffold00019 627039 1 A T - ReadM SNP 0004.scaffold00019 627197 1 G T - ReadM SNP 0004.scaffold00019 627231 1 G A - ReadM SNP 0004.scaffold00019 627373 1 C T - ReadM SNP 0004.scaffold00019 627414 1 T G - ReadM SNP 0004.scaffold00019 627419 1 C T - ReadM SNP 0004.scaffold00019 627431 1 A G - ReadM SNP 0004.scaffold00019 627557 1 A C - ReadM SNP 0004.scaffold00019 627563 1 T G - ReadM SNP 0004.scaffold00019 627587 1 G A - ReadM SNP 0004.scaffold00019 627876 1 C T - ReadM SNP 0004.scaffold00019 627918 1 C T - ReadM SNP 0004.scaffold00019 627961 1 G A - ReadM INDEL 0004.scaffold00019 629668 1 . T - ReadM SNP 0004.scaffold00019 629709 1 T G - ReadM SNP 0004.scaffold00019 629730 1 G A - ReadM SNP 0004.scaffold00019 629868 1 T C - ReadM SNP 0004.scaffold00019 629870 1 G A - Both SNP 0004.scaffold00019 629907 1 C T scaffold5689 Both SNP 0004.scaffold00019 630221 1 G A scaffold5689 Both SNP 0004.scaffold00019 630302 1 A G scaffold5689 Both SNP 0004.scaffold00019 630383 1 T G scaffold5689 Both SNP 0004.scaffold00019 630401 1 A G scaffold5689 ReadM SNP 0004.scaffold00019 630599 1 A G - ReadM SNP 0004.scaffold00019 630622 1 C T - ReadM SNP 0004.scaffold00019 630644 1 G C - ReadM SNP 0004.scaffold00019 630658 1 T G - ReadM SNP 0004.scaffold00019 630858 1 T C - ReadM SNP 0004.scaffold00019 630893 1 C A - ReadM SNP 0004.scaffold00019 630942 1 C T - ReadM SNP 0004.scaffold00019 630970 1 T C - ReadM INDEL 0004.scaffold00019 631003 1 . G - ReadM SNP 0004.scaffold00019 631164 1 C T - ReadM SNP 0004.scaffold00019 631181 1 G A - ReadM SNP 0004.scaffold00019 631401 1 C G - ReadM SNP 0004.scaffold00019 631420 1 A C - ReadM SNP 0004.scaffold00019 631442 1 A G - ReadM SNP 0004.scaffold00019 631751 1 T A - ReadM SNP 0004.scaffold00019 631942 1 G A - ReadM SNP 0004.scaffold00019 631952 1 T G - ReadM SNP 0004.scaffold00019 632247 1 C G - ReadM SNP 0004.scaffold00019 632725 1 A G - ReadM SNP 0004.scaffold00019 632769 1 T G - ReadM SNP 0004.scaffold00019 632789 1 C A - ReadM SNP 0004.scaffold00019 632794 1 A C - ScafM SNP 0004.scaffold00019 632969 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 632984 1 T G scaffold5689 ScafM SNP 0004.scaffold00019 632992 1 T G scaffold5689 ScafM SNP 0004.scaffold00019 633004 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 633017 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 633024 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 633029 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 633041 1 A C scaffold5689 ScafM INDEL 0004.scaffold00019 633059 4 AACT .... scaffold5689 Both INDEL 0004.scaffold00019 633094 1 G . scaffold5689 Both SNP 0004.scaffold00019 633185 1 T C scaffold5689 Both SNP 0004.scaffold00019 633227 1 G A scaffold5689 Both SNP 0004.scaffold00019 633262 1 C A scaffold5689 Both SNP 0004.scaffold00019 633274 1 G C scaffold5689 Both SNP 0004.scaffold00019 633329 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 633347 2 CC TT scaffold5689 ScafM SNP 0004.scaffold00019 633351 1 C A scaffold5689 ScafM SNP 0004.scaffold00019 633404 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 633415 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 633417 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 633430 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 633452 1 G T scaffold5689 Both SNP 0004.scaffold00019 633494 1 G A scaffold5689 Both SNP 0004.scaffold00019 633553 1 G C scaffold5689 Both SNP 0004.scaffold00019 633614 1 G C scaffold5689 Both SNP 0004.scaffold00019 633622 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 633642 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 633653 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 633665 1 T G scaffold5689 ScafM INDEL 0004.scaffold00019 633672 5 ..... TCAGC scaffold5689 Both SNP 0004.scaffold00019 633804 1 G T scaffold5689 Both SNP 0004.scaffold00019 633844 1 T C scaffold5689 Both SNP 0004.scaffold00019 633932 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 633969 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 633971 1 C T scaffold5689 Both SNP 0004.scaffold00019 634035 1 G A scaffold5689 Both SNP 0004.scaffold00019 634041 1 T C scaffold5689 Both SNP 0004.scaffold00019 634112 1 G A scaffold5689 Both SNP 0004.scaffold00019 634115 1 C G scaffold5689 Both SNP 0004.scaffold00019 634124 1 A G scaffold5689 Both SNP 0004.scaffold00019 634197 1 T A scaffold5689 Both SNP 0004.scaffold00019 634210 1 T A scaffold5689 Both SNP 0004.scaffold00019 634244 1 A G scaffold5689 Both SNP 0004.scaffold00019 634253 1 A G scaffold5689 Both SNP 0004.scaffold00019 634293 1 G A scaffold5689 Both SNP 0004.scaffold00019 634450 1 A T scaffold5689 Both SNP 0004.scaffold00019 634556 1 A T scaffold5689 Both SNP 0004.scaffold00019 634606 1 G A scaffold5689 Both SNP 0004.scaffold00019 634635 1 T C scaffold5689 Both SNP 0004.scaffold00019 634645 1 G C scaffold5689 Both SNP 0004.scaffold00019 634729 1 T G scaffold5689 ReadM SNP 0004.scaffold00019 634955 1 T C - ReadM SNP 0004.scaffold00019 634962 1 G C - Both SNP 0004.scaffold00019 635070 1 T C scaffold5689 Both SNP 0004.scaffold00019 635125 1 T C scaffold5689 Both SNP 0004.scaffold00019 635139 1 C G scaffold5689 ReadM SNP 0004.scaffold00019 635175 1 A G - ReadM SNP 0004.scaffold00019 635204 1 T C - ReadM SNP 0004.scaffold00019 635398 1 T A - Both SNP 0004.scaffold00019 635482 1 C T scaffold5689 Both SNP 0004.scaffold00019 635525 1 C G scaffold5689 ScafM INDEL 0004.scaffold00019 635755 40 ........................................ TAATAGTTAACATGCTCACCTACTATAAATATTGCTTCAT scaffold5689 ScafM SNP 0004.scaffold00019 635789 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 635872 1 T G scaffold5689 ScafM INDEL 0004.scaffold00019 635918 9 ......... TCAACAATA scaffold5689 ScafM SNP 0004.scaffold00019 635999 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 636013 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 636140 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 636241 1 G A scaffold5689 ScafM SNP 0004.scaffold00019 636325 1 C A scaffold5689 ScafM SNP 0004.scaffold00019 636332 1 T G scaffold5689 ScafM SNP 0004.scaffold00019 636344 2 CT TG scaffold5689 ScafM INDEL 0004.scaffold00019 636353 3 AAC ... scaffold5689 ScafM INDEL 0004.scaffold00019 636362 1 A . scaffold5689 ScafM SNP 0004.scaffold00019 636376 1 G T scaffold5689 ScafM SNP 0004.scaffold00019 636424 1 A T scaffold5689 Both SNP 0004.scaffold00019 636445 1 T A scaffold5689 ScafM SNP 0004.scaffold00019 636473 1 G T scaffold5689 Both SNP 0004.scaffold00019 636534 1 T C scaffold5689 Both SNP 0004.scaffold00019 636595 1 C A scaffold5689 Both SNP 0004.scaffold00019 636709 1 C T scaffold5689 ScafM SNP 0004.scaffold00019 636779 1 G T scaffold5689 ScafM SNP 0004.scaffold00019 636798 1 T C scaffold5689 ScafM SNP 0004.scaffold00019 636849 1 A G scaffold5689 ScafM SNP 0004.scaffold00019 636870 1 A T scaffold5689 ScafM SNP 0004.scaffold00019 636895 1 A C scaffold5689 ScafM SNP 0004.scaffold00019 636919 1 A G scaffold5689 ReadM SNP 0004.scaffold00019 640194 1 G A - ReadM SNP 0004.scaffold00019 640662 1 G T - ReadM SNP 0004.scaffold00019 640733 1 C T - ReadM SNP 0004.scaffold00019 640739 1 G A - ReadM SNP 0004.scaffold00019 640758 1 C T - ReadM SNP 0004.scaffold00019 641347 1 T C - ReadM SNP 0004.scaffold00019 644209 1 G A - ReadM SNP 0004.scaffold00019 644238 1 A G - ReadM SNP 0004.scaffold00019 644669 1 C T - ReadM SNP 0004.scaffold00019 644934 1 T C - ReadM SNP 0004.scaffold00019 650244 1 C T - ReadM SNP 0004.scaffold00019 650325 1 A G - ReadM INDEL 0004.scaffold00019 650392 3 ... GTC - ReadM SNP 0004.scaffold00019 653099 1 G A - ReadM SNP 0004.scaffold00019 653124 1 A T - ReadM SNP 0004.scaffold00019 653228 1 T C - ReadM SNP 0004.scaffold00019 653680 1 C G - ReadM SNP 0004.scaffold00019 653693 1 G C - ReadM SNP 0004.scaffold00019 653780 1 T G - ReadM SNP 0004.scaffold00019 653786 1 T A - ReadM SNP 0004.scaffold00019 653918 1 G A - ReadM SNP 0004.scaffold00019 653921 1 A G - ReadM SNP 0004.scaffold00019 654167 1 T A - ReadM SNP 0004.scaffold00019 654216 1 A G - ReadM SNP 0004.scaffold00019 655620 1 G C - ReadM INDEL 0004.scaffold00019 655679 1 G . - ReadM SNP 0004.scaffold00019 656000 1 A T - ReadM SNP 0004.scaffold00019 656053 1 T G - ReadM SNP 0004.scaffold00019 656095 1 T C - ReadM SNP 0004.scaffold00019 656122 1 C A - ReadM SNP 0004.scaffold00019 656171 1 A C - ReadM SNP 0004.scaffold00019 656176 1 T C - ReadM SNP 0004.scaffold00019 656188 1 G C - ReadM INDEL 0004.scaffold00019 656447 1 A . - ReadM SNP 0004.scaffold00019 656459 1 A T - ReadM SNP 0004.scaffold00019 656473 1 G C - ReadM SNP 0004.scaffold00019 656541 1 C G - ReadM SNP 0004.scaffold00019 656544 1 A G - ReadM SNP 0004.scaffold00019 656621 1 A T - ReadM SNP 0004.scaffold00019 656646 1 A G - ReadM SNP 0004.scaffold00019 656825 1 T C - ReadM SNP 0004.scaffold00019 656843 1 A C - ReadM SNP 0004.scaffold00019 656974 1 A C - ReadM SNP 0004.scaffold00019 657005 1 G C - ReadM SNP 0004.scaffold00019 657256 1 A G - ReadM SNP 0004.scaffold00019 657272 1 G A - ReadM SNP 0004.scaffold00019 657442 1 G A - ReadM SNP 0004.scaffold00019 657595 1 T G - ReadM SNP 0004.scaffold00019 657616 1 C T - ReadM SNP 0004.scaffold00019 657625 1 C T - ReadM SNP 0004.scaffold00019 657726 1 A G - ReadM SNP 0004.scaffold00019 657784 1 C T - ReadM SNP 0004.scaffold00019 657817 1 A G - ReadM SNP 0004.scaffold00019 657867 1 C T - ReadM SNP 0004.scaffold00019 657877 1 T G - ReadM SNP 0004.scaffold00019 657911 1 A G - ReadM SNP 0004.scaffold00019 657941 1 C T - ReadM SNP 0004.scaffold00019 657984 1 A T - ReadM SNP 0004.scaffold00019 658026 1 T A - ReadM SNP 0004.scaffold00019 658050 1 A T - ReadM SNP 0004.scaffold00019 658092 1 C A - ReadM SNP 0004.scaffold00019 658173 1 T G - ReadM SNP 0004.scaffold00019 658194 1 A G - ReadM SNP 0004.scaffold00019 658213 1 C G - ReadM SNP 0004.scaffold00019 658584 1 C T - ReadM SNP 0004.scaffold00019 658629 1 C A - ReadM SNP 0004.scaffold00019 658689 1 C T - ReadM SNP 0004.scaffold00019 658760 1 C T - ReadM SNP 0004.scaffold00019 658871 1 A G - ReadM SNP 0004.scaffold00019 659098 1 A G - ReadM INDEL 0004.scaffold00019 659161 1 A . - ReadM SNP 0004.scaffold00019 659250 1 T G - ReadM SNP 0004.scaffold00019 659350 1 T C - ReadM SNP 0004.scaffold00019 659443 1 T C - ReadM SNP 0004.scaffold00019 659533 1 A G - ReadM SNP 0004.scaffold00019 659550 1 A G - ReadM SNP 0004.scaffold00019 659668 1 G A - ReadM SNP 0004.scaffold00019 659911 1 C G - ReadM SNP 0004.scaffold00019 659940 1 A G - ReadM SNP 0004.scaffold00019 659949 1 T C - ReadM SNP 0004.scaffold00019 659988 1 T A - ReadM SNP 0004.scaffold00019 660177 1 C T - ReadM SNP 0004.scaffold00019 660195 1 T C - ReadM SNP 0004.scaffold00019 660321 1 T C - ReadM SNP 0004.scaffold00019 660350 1 A G - ReadM SNP 0004.scaffold00019 660436 1 A G - ScafM INDEL 0004.scaffold00019 660513 5 ..... AAAAA scaffold2627 Both SNP 0004.scaffold00019 660581 1 G A scaffold2627 Both SNP 0004.scaffold00019 660644 1 T C scaffold2627 Both SNP 0004.scaffold00019 660648 1 T G scaffold2627 Both SNP 0004.scaffold00019 660753 1 T C scaffold2627 Both SNP 0004.scaffold00019 660773 1 C T scaffold2627 Both SNP 0004.scaffold00019 660837 1 A G scaffold2627 ReadM SNP 0004.scaffold00019 661010 1 T C - ReadM SNP 0004.scaffold00019 661031 1 T C - ReadM SNP 0004.scaffold00019 661086 1 T C - ReadM SNP 0004.scaffold00019 661117 1 C T - ReadM INDEL 0004.scaffold00019 661126 1 . T - ReadM SNP 0004.scaffold00019 661184 1 T G - ReadM SNP 0004.scaffold00019 661186 1 A G - ReadM SNP 0004.scaffold00019 661225 1 T C - ReadM SNP 0004.scaffold00019 661347 1 C A - ReadM SNP 0004.scaffold00019 661372 1 A T - ReadM SNP 0004.scaffold00019 661402 1 A T - ReadM SNP 0004.scaffold00019 661434 1 G A - ReadM SNP 0004.scaffold00019 661457 1 T G - ReadM SNP 0004.scaffold00019 661486 1 A G - ReadM SNP 0004.scaffold00019 661601 1 A T - ReadM SNP 0004.scaffold00019 661702 1 C T - ReadM SNP 0004.scaffold00019 661763 1 G A - ReadM SNP 0004.scaffold00019 661803 1 A G - ReadM SNP 0004.scaffold00019 661832 1 T A - ReadM SNP 0004.scaffold00019 661858 1 A G - ReadM SNP 0004.scaffold00019 661974 1 T C - ReadM SNP 0004.scaffold00019 661987 1 A G - ReadM SNP 0004.scaffold00019 662072 1 A G - ReadM SNP 0004.scaffold00019 662260 1 G T - ReadM SNP 0004.scaffold00019 662325 1 G T - ReadM SNP 0004.scaffold00019 662354 1 C T - ReadM SNP 0004.scaffold00019 662461 1 G T - ReadM SNP 0004.scaffold00019 662539 1 G A - ReadM SNP 0004.scaffold00019 662573 1 T C - ReadM SNP 0004.scaffold00019 662620 1 C T - ReadM SNP 0004.scaffold00019 662682 1 C T - ReadM SNP 0004.scaffold00019 662750 1 C A - ReadM SNP 0004.scaffold00019 662930 1 C A - ReadM SNP 0004.scaffold00019 663064 1 A G - ScafM SNP 0004.scaffold00019 663177 1 G C scaffold2627 ReadM SNP 0004.scaffold00019 663259 1 T A - ReadM SNP 0004.scaffold00019 663368 1 G T - ScafM SNP 0004.scaffold00019 663489 1 C A scaffold2627 ScafM SNP 0004.scaffold00019 663575 1 A C scaffold2627 Both SNP 0004.scaffold00019 663649 1 A T scaffold2627 Both SNP 0004.scaffold00019 663656 1 G T scaffold2627 Both SNP 0004.scaffold00019 663675 1 C G scaffold2627 ScafM SNP 0004.scaffold00019 663738 1 G A scaffold2627 ScafM SNP 0004.scaffold00019 663772 1 A T scaffold2627 ScafM SNP 0004.scaffold00019 663786 1 T C scaffold2627 ScafM INDEL 0004.scaffold00019 663840 1 . G scaffold2627 ScafM SNP 0004.scaffold00019 663999 1 C T scaffold2627 ScafM SNP 0004.scaffold00019 664130 1 G A scaffold3046 ScafM SNP 0004.scaffold00019 664134 1 G A scaffold3046 ScafM SNP 0004.scaffold00019 664139 1 T C scaffold3046 ScafM SNP 0004.scaffold00019 664168 1 G C scaffold3046 ScafM SNP 0004.scaffold00019 664210 1 T C scaffold3046 ScafM INDEL 0004.scaffold00019 664249 1 G . scaffold3046 ReadM SNP 0004.scaffold00019 664314 1 A G - ReadM SNP 0004.scaffold00019 664642 1 G C - ReadM SNP 0004.scaffold00019 664729 1 C T - ReadM SNP 0004.scaffold00019 664769 1 T C - ReadM SNP 0004.scaffold00019 664852 1 C T - ReadM SNP 0004.scaffold00019 665850 1 G A - ReadM SNP 0004.scaffold00019 665866 1 G A - ReadM SNP 0004.scaffold00019 665877 1 A G - ReadM SNP 0004.scaffold00019 665924 1 A G - ReadM SNP 0004.scaffold00019 666180 1 A G - ReadM SNP 0004.scaffold00019 666215 1 C T - ReadM SNP 0004.scaffold00019 666369 1 C A - ReadM SNP 0004.scaffold00019 666522 1 G A - ReadM SNP 0004.scaffold00019 666698 1 T G - ReadM SNP 0004.scaffold00019 666708 1 T G - ReadM SNP 0004.scaffold00019 666785 1 T C - ReadM SNP 0004.scaffold00019 666972 1 T C - ReadM SNP 0004.scaffold00019 667002 1 C A - ReadM SNP 0004.scaffold00019 667065 1 A C - ReadM SNP 0004.scaffold00019 667274 1 C T - ReadM SNP 0004.scaffold00019 667340 1 A G - ReadM SNP 0004.scaffold00019 667345 1 C G - ReadM SNP 0004.scaffold00019 667354 1 A T - ReadM SNP 0004.scaffold00019 667519 1 T A - ReadM SNP 0004.scaffold00019 667560 1 T A - ReadM SNP 0004.scaffold00019 667741 1 C A - ReadM SNP 0004.scaffold00019 668090 1 A G - ReadM SNP 0004.scaffold00019 668156 1 C T - ReadM SNP 0004.scaffold00019 668166 1 G A - ReadM SNP 0004.scaffold00019 668205 1 C T - ReadM SNP 0004.scaffold00019 668249 1 T G - ReadM SNP 0004.scaffold00019 668264 1 G C - ReadM SNP 0004.scaffold00019 670497 1 T C - ReadM SNP 0004.scaffold00019 670537 1 T A - ReadM SNP 0004.scaffold00019 670601 1 A G - ReadM SNP 0004.scaffold00019 670730 1 A C - Both SNP 0004.scaffold00019 673343 1 T A scaffold18163 ReadM SNP 0004.scaffold00019 673522 1 C G - ReadM SNP 0004.scaffold00019 673564 1 T A - ReadM SNP 0004.scaffold00019 673808 1 C T - ReadM SNP 0004.scaffold00019 674001 1 G A - ReadM SNP 0004.scaffold00019 674128 1 A G - ReadM SNP 0004.scaffold00019 674156 1 T C - ReadM SNP 0004.scaffold00019 674296 1 C T - ReadM SNP 0004.scaffold00019 674372 1 T C - ReadM INDEL 0004.scaffold00019 674656 2 TT .. - ScafM SNP 0004.scaffold00019 674815 1 C A scaffold18163 ScafM SNP 0004.scaffold00019 674834 1 C A scaffold18163 ScafM SNP 0004.scaffold00019 678935 1 T C scaffold27019 ReadM SNP 0004.scaffold00019 679594 1 G T - ReadM INDEL 0004.scaffold00019 679602 1 A . - ReadM SNP 0004.scaffold00019 679641 1 T G - ReadM SNP 0004.scaffold00019 680312 1 C G - ReadM SNP 0004.scaffold00019 680598 1 G A - ReadM SNP 0004.scaffold00019 680903 1 T G - ReadM SNP 0004.scaffold00019 681108 1 T A - ReadM SNP 0004.scaffold00019 681138 1 C A - ReadM SNP 0004.scaffold00019 681194 1 T C - ReadM SNP 0004.scaffold00019 681597 1 A G - ScafM SNP 0004.scaffold00019 682484 1 A G scaffold24602 ScafM SNP 0004.scaffold00019 682515 1 G C scaffold24602 ScafM INDEL 0004.scaffold00019 682523 1 T . scaffold24602 ScafM SNP 0004.scaffold00019 682530 1 T A scaffold24602 ScafM SNP 0004.scaffold00019 682547 1 G A scaffold24602 ScafM INDEL 0004.scaffold00019 682608 1 T . scaffold24602 ScafM SNP 0004.scaffold00019 682619 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 682702 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 682741 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 682752 1 T A scaffold24602 ScafM SNP 0004.scaffold00019 682872 1 A T scaffold24602 ReadM SNP 0004.scaffold00019 683104 1 T C - ReadM SNP 0004.scaffold00019 683115 1 A G - ReadM SNP 0004.scaffold00019 683143 1 T C - ReadM SNP 0004.scaffold00019 683152 1 T A - ReadM SNP 0004.scaffold00019 683357 1 T C - ReadM SNP 0004.scaffold00019 683366 1 C T - ReadM SNP 0004.scaffold00019 683368 1 A T - Both SNP 0004.scaffold00019 683763 1 A C scaffold24602 Both SNP 0004.scaffold00019 683785 1 A G scaffold24602 Both INDEL 0004.scaffold00019 683826 1 . T scaffold24602 Both SNP 0004.scaffold00019 683845 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 683959 1 C A scaffold24602 ScafM SNP 0004.scaffold00019 683973 1 C T scaffold24602 Both SNP 0004.scaffold00019 684008 1 C T scaffold24602 Both SNP 0004.scaffold00019 684032 1 A G scaffold24602 Both SNP 0004.scaffold00019 684038 1 G C scaffold24602 Both SNP 0004.scaffold00019 684145 1 C T scaffold24602 ReadM SNP 0004.scaffold00019 684227 1 T G - ReadM SNP 0004.scaffold00019 684301 1 A G - Both SNP 0004.scaffold00019 684524 1 G T scaffold24602 Both SNP 0004.scaffold00019 684563 1 T C scaffold24602 ReadM SNP 0004.scaffold00019 684852 1 G A - ScafM SNP 0004.scaffold00019 684920 2 AA GG scaffold24602 ReadM SNP 0004.scaffold00019 685050 1 A T - ReadM SNP 0004.scaffold00019 685297 1 G A - ReadM INDEL 0004.scaffold00019 685305 1 A . - ReadM SNP 0004.scaffold00019 685317 1 T C - ReadM SNP 0004.scaffold00019 685341 1 T G - ReadM SNP 0004.scaffold00019 685384 1 A T - ReadM SNP 0004.scaffold00019 685426 1 C A - ReadM SNP 0004.scaffold00019 685463 1 G C - ReadM SNP 0004.scaffold00019 685466 1 T C - ReadM SNP 0004.scaffold00019 685552 1 T G - ReadM SNP 0004.scaffold00019 685617 1 A G - ReadM SNP 0004.scaffold00019 685624 1 T C - ReadM SNP 0004.scaffold00019 685831 1 A C - ReadM SNP 0004.scaffold00019 686089 1 G A - ReadM SNP 0004.scaffold00019 686155 1 C T - ReadM SNP 0004.scaffold00019 686314 1 G C - ReadM SNP 0004.scaffold00019 686339 1 G A - ReadM SNP 0004.scaffold00019 686450 1 G A - ReadM SNP 0004.scaffold00019 686520 1 T C - ReadM SNP 0004.scaffold00019 686545 1 G C - ReadM SNP 0004.scaffold00019 686610 1 C T - ReadM SNP 0004.scaffold00019 686666 1 A G - ReadM SNP 0004.scaffold00019 686776 1 C A - ReadM SNP 0004.scaffold00019 686794 1 T G - ReadM SNP 0004.scaffold00019 687032 1 C T - ReadM SNP 0004.scaffold00019 687106 1 G A - ReadM SNP 0004.scaffold00019 687236 1 A G - ReadM SNP 0004.scaffold00019 687254 1 G A - ReadM SNP 0004.scaffold00019 687263 1 A T - ReadM SNP 0004.scaffold00019 687306 1 C G - ReadM SNP 0004.scaffold00019 687353 1 G A - ReadM SNP 0004.scaffold00019 687422 1 T G - ReadM SNP 0004.scaffold00019 687452 1 C A - ReadM SNP 0004.scaffold00019 687498 1 G T - ReadM SNP 0004.scaffold00019 687573 1 C T - ReadM SNP 0004.scaffold00019 687599 1 A G - ReadM SNP 0004.scaffold00019 687710 1 C T - ReadM SNP 0004.scaffold00019 687888 1 A G - ReadM SNP 0004.scaffold00019 687928 1 T G - ReadM SNP 0004.scaffold00019 687987 1 T C - ReadM SNP 0004.scaffold00019 688048 1 G A - ReadM SNP 0004.scaffold00019 688153 1 T C - ReadM SNP 0004.scaffold00019 688320 1 A G - ReadM SNP 0004.scaffold00019 688338 1 G T - ReadM SNP 0004.scaffold00019 688376 1 C T - ReadM SNP 0004.scaffold00019 688399 1 A T - ReadM SNP 0004.scaffold00019 688699 1 G A - ReadM SNP 0004.scaffold00019 688732 1 A G - ReadM SNP 0004.scaffold00019 688805 1 T A - ScafM SNP 0004.scaffold00019 688912 1 G C scaffold24602 ScafM SNP 0004.scaffold00019 689016 1 A G scaffold24602 ScafM SNP 0004.scaffold00019 689035 1 C T scaffold24602 ScafM SNP 0004.scaffold00019 689177 1 G C scaffold24602 ScafM SNP 0004.scaffold00019 689460 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 689502 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 689535 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 689586 1 C G scaffold24602 ScafM INDEL 0004.scaffold00019 689630 1 . G scaffold24602 ScafM SNP 0004.scaffold00019 689632 1 A C scaffold24602 ScafM SNP 0004.scaffold00019 689671 1 A T scaffold24602 ScafM SNP 0004.scaffold00019 689676 1 G T scaffold24602 ScafM SNP 0004.scaffold00019 689690 2 CC AT scaffold24602 ScafM SNP 0004.scaffold00019 689719 1 G C scaffold24602 Both SNP 0004.scaffold00019 689754 1 A G scaffold24602 Both SNP 0004.scaffold00019 689813 1 G A scaffold24602 Both SNP 0004.scaffold00019 689873 1 A G scaffold24602 ScafM INDEL 0004.scaffold00019 689967 10 .......... ACGAATTTCA scaffold24602 ScafM INDEL 0004.scaffold00019 689969 2 .. CC scaffold24602 ScafM INDEL 0004.scaffold00019 689976 1 . G scaffold24602 ScafM INDEL 0004.scaffold00019 689989 13 ............. TGAATTTCACTCA scaffold24602 Both SNP 0004.scaffold00019 690062 1 T C scaffold24602 Both SNP 0004.scaffold00019 690107 1 C A scaffold24602 Both SNP 0004.scaffold00019 690129 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 690221 1 T G scaffold24602 Both SNP 0004.scaffold00019 690238 1 T G scaffold24602 Both SNP 0004.scaffold00019 690340 1 T C scaffold24602 Both SNP 0004.scaffold00019 690382 1 A G scaffold24602 Both SNP 0004.scaffold00019 690394 1 A G scaffold24602 Both SNP 0004.scaffold00019 690426 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 690578 1 T C scaffold24602 ScafM SNP 0004.scaffold00019 690582 1 A G scaffold24602 ScafM SNP 0004.scaffold00019 690585 1 A G scaffold24602 ScafM SNP 0004.scaffold00019 690589 1 G A scaffold24602 Both SNP 0004.scaffold00019 690665 1 G C scaffold24602 Both SNP 0004.scaffold00019 690757 1 G A scaffold24602 Both SNP 0004.scaffold00019 690829 1 T C scaffold24602 Both SNP 0004.scaffold00019 691064 1 A C scaffold24602 Both SNP 0004.scaffold00019 691105 1 T A scaffold24602 Both SNP 0004.scaffold00019 691149 1 C T scaffold24602 ScafM SNP 0004.scaffold00019 691211 1 C G scaffold24602 ScafM SNP 0004.scaffold00019 691217 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 691236 1 C T scaffold24602 ScafM SNP 0004.scaffold00019 691238 1 G A scaffold24602 Both SNP 0004.scaffold00019 691295 1 A G scaffold24602 Both SNP 0004.scaffold00019 691347 1 T A scaffold24602 ScafM SNP 0004.scaffold00019 691396 1 C G scaffold24602 ScafM SNP 0004.scaffold00019 691416 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 691431 1 G C scaffold24602 ScafM SNP 0004.scaffold00019 691447 1 C T scaffold24602 ScafM SNP 0004.scaffold00019 691484 1 G A scaffold24602 ScafM SNP 0004.scaffold00019 691489 1 C T scaffold24602 ScafM INDEL 0004.scaffold00019 691491 3 TGT ... scaffold24602 ScafM SNP 0004.scaffold00019 691519 1 G T scaffold24602 Both SNP 0004.scaffold00019 691611 1 T C scaffold24602 Both SNP 0004.scaffold00019 691643 1 G A scaffold24602 ScafM INDEL 0004.scaffold00019 691725 8 ATGTCTGA ........ scaffold24602 ScafM SNP 0004.scaffold00019 691790 1 G T scaffold24602 ScafM SNP 0004.scaffold00019 691793 1 C T scaffold24602 ScafM SNP 0004.scaffold00019 691822 1 T A scaffold24602 ScafM SNP 0004.scaffold00019 691849 1 C G scaffold24602 ScafM SNP 0004.scaffold00019 691975 1 C A scaffold24602 ScafM SNP 0004.scaffold00019 691994 1 A G scaffold24602 ScafM SNP 0004.scaffold00019 692048 1 C A scaffold430 ScafM SNP 0004.scaffold00019 692084 1 C G scaffold430 ScafM SNP 0004.scaffold00019 692118 1 G C scaffold430 ScafM INDEL 0004.scaffold00019 692141 4 .... ATCA scaffold430 ScafM INDEL 0004.scaffold00019 692142 5 ..... CAACA scaffold430 ScafM INDEL 0004.scaffold00019 692144 3 ... ATT scaffold430 ScafM INDEL 0004.scaffold00019 692150 3 ... ATG scaffold430 ScafM SNP 0004.scaffold00019 692229 1 C T scaffold430 ScafM SNP 0004.scaffold00019 692259 1 G C scaffold430 ScafM SNP 0004.scaffold00019 692297 1 T C scaffold430 ScafM SNP 0004.scaffold00019 692302 1 T C scaffold430 ScafM INDEL 0004.scaffold00019 692375 1 . A scaffold430 ScafM SNP 0004.scaffold00019 692384 1 C A scaffold430 ScafM SNP 0004.scaffold00019 692391 1 C T scaffold430 ScafM SNP 0004.scaffold00019 692404 1 T G scaffold430 ScafM INDEL 0004.scaffold00019 692439 4 ATAT .... scaffold430 ScafM SNP 0004.scaffold00019 692464 1 C A scaffold430 ScafM SNP 0004.scaffold00019 692523 1 T A scaffold430 ReadM SNP 0004.scaffold00019 692535 1 C G - ScafM INDEL 0004.scaffold00019 692756 1 C . scaffold38896 ScafM INDEL 0004.scaffold00019 692813 57 ......................................................... GTTTTATTTACCAATTACCACATACAGTGTATGATGGTCATATACTTTTACTTAGTA scaffold38896 Both SNP 0004.scaffold00019 692853 1 G T scaffold38896 Both SNP 0004.scaffold00019 692923 1 G A scaffold38896 Both SNP 0004.scaffold00019 693023 1 G A scaffold38896 ScafM SNP 0004.scaffold00019 693041 1 A G scaffold38896 ScafM SNP 0004.scaffold00019 693077 1 A C scaffold38896 ScafM SNP 0004.scaffold00019 693082 1 C T scaffold38896 ScafM SNP 0004.scaffold00019 693084 1 C T scaffold38896 ScafM SNP 0004.scaffold00019 693107 1 T G scaffold38896 ScafM SNP 0004.scaffold00019 693114 1 G A scaffold38896 Both SNP 0004.scaffold00019 693120 1 T C scaffold38896 Both SNP 0004.scaffold00019 693202 1 A G scaffold38896 Both SNP 0004.scaffold00019 693234 1 A G scaffold38896 Both SNP 0004.scaffold00019 693281 1 T C scaffold38896 Both SNP 0004.scaffold00019 693415 1 C G scaffold38896 Both SNP 0004.scaffold00019 693423 1 C A scaffold38896 ScafM INDEL 0004.scaffold00019 693532 5 ..... TACAG scaffold38896 ScafM SNP 0004.scaffold00019 693579 1 C T scaffold38896 Both SNP 0004.scaffold00019 693633 1 G T scaffold38896 Both SNP 0004.scaffold00019 693651 1 G A scaffold38896 ScafM INDEL 0004.scaffold00019 693695 1 A . scaffold38896 Both SNP 0004.scaffold00019 693787 1 C T scaffold38896 Both SNP 0004.scaffold00019 693811 1 C T scaffold38896 Both SNP 0004.scaffold00019 693839 1 G A scaffold38896 ScafM SNP 0004.scaffold00019 694094 1 G C scaffold25396 ScafM SNP 0004.scaffold00019 694096 1 G C scaffold25396 ScafM SNP 0004.scaffold00019 694101 1 G T scaffold25396 ScafM SNP 0004.scaffold00019 694129 1 A G scaffold25396 ScafM SNP 0004.scaffold00019 694133 1 T A scaffold25396 ScafM SNP 0004.scaffold00019 694135 1 A C scaffold25396 ScafM SNP 0004.scaffold00019 694198 1 G T scaffold25396 ScafM SNP 0004.scaffold00019 694234 1 T C scaffold25396 ScafM SNP 0004.scaffold00019 694240 1 G T scaffold25396 ScafM SNP 0004.scaffold00019 694242 1 T C scaffold25396 ReadM SNP 0004.scaffold00019 694283 1 A G - ScafM SNP 0004.scaffold00019 694297 1 G A scaffold25396 ScafM SNP 0004.scaffold00019 694311 1 A G scaffold25396 ScafM SNP 0004.scaffold00019 694360 1 A T scaffold25396 ScafM SNP 0004.scaffold00019 694530 1 A G scaffold25396 ReadM SNP 0004.scaffold00019 694667 1 A G - ReadM SNP 0004.scaffold00019 694749 1 C T - ScafM SNP 0004.scaffold00019 694848 1 C G scaffold5772 Both SNP 0004.scaffold00019 694886 1 T G scaffold5772 Both SNP 0004.scaffold00019 694923 1 C T scaffold5772 Both SNP 0004.scaffold00019 694932 1 T C scaffold5772 Both SNP 0004.scaffold00019 695051 1 G A scaffold5772 ScafM SNP 0004.scaffold00019 695078 1 T G scaffold5772 Both SNP 0004.scaffold00019 695296 1 A G scaffold5772 Both SNP 0004.scaffold00019 695329 1 G C scaffold5772 Both SNP 0004.scaffold00019 695344 1 T C scaffold5772 Both SNP 0004.scaffold00019 695397 1 T C scaffold5772 Both SNP 0004.scaffold00019 695460 1 G A scaffold5772 ReadM SNP 0004.scaffold00019 696381 1 G A - Both SNP 0004.scaffold00019 696629 1 G A scaffold5772 ScafM SNP 0004.scaffold00019 696945 1 G A scaffold5772 ScafM SNP 0004.scaffold00019 696970 2 AA GG scaffold5772 ScafM SNP 0004.scaffold00019 696985 1 A G scaffold5772 Both SNP 0004.scaffold00019 697051 1 G C scaffold5772 ScafM INDEL 0004.scaffold00019 697253 3 ... AAA scaffold5772 ScafM INDEL 0004.scaffold00019 697281 3 ... AAA scaffold5772 ScafM SNP 0004.scaffold00019 697283 1 C A scaffold5772 Both INDEL 0004.scaffold00019 697368 1 . C scaffold5772 Both SNP 0004.scaffold00019 697402 1 G C scaffold5772 ReadM SNP 0004.scaffold00019 697554 1 T G - ReadM SNP 0004.scaffold00019 698789 1 T G - ReadM SNP 0004.scaffold00019 698959 1 A G - ReadM SNP 0004.scaffold00019 698971 1 G T - ReadM SNP 0004.scaffold00019 699146 1 A T - ReadM SNP 0004.scaffold00019 699683 1 T C - ReadM SNP 0004.scaffold00019 699867 1 T C - Both SNP 0004.scaffold00019 700018 1 A G scaffold5772 Both SNP 0004.scaffold00019 700171 1 A G scaffold5772 ReadM SNP 0004.scaffold00019 700371 1 A G - ScafM INDEL 0004.scaffold00019 700551 40 ........................................ CTATTGAGCAATTAAATCAGAGGTTGAGGGACCAACCAGA scaffold28915 Both SNP 0004.scaffold00019 700746 1 A T scaffold28915 Both SNP 0004.scaffold00019 700853 1 A G scaffold28915 ScafM SNP 0004.scaffold00019 700924 1 T C scaffold28915 ScafM SNP 0004.scaffold00019 701000 1 T A scaffold28915 ScafM INDEL 0004.scaffold00019 701022 3 ... CGG scaffold28915 ScafM INDEL 0004.scaffold00019 701042 7 AGCCCAC ....... scaffold28915 ScafM SNP 0004.scaffold00019 701054 1 G T scaffold28915 ReadM SNP 0004.scaffold00019 701294 1 T A - ReadM SNP 0004.scaffold00019 701832 1 G A - ReadM SNP 0004.scaffold00019 702039 1 A C - ReadM SNP 0004.scaffold00019 702439 1 G A - ReadM SNP 0004.scaffold00019 702519 1 C A - ReadM SNP 0004.scaffold00019 702848 1 C T - ReadM INDEL 0004.scaffold00019 702961 1 A . - ReadM SNP 0004.scaffold00019 703098 1 C T - ReadM INDEL 0004.scaffold00019 703109 1 . C - ReadM SNP 0004.scaffold00019 703181 1 T C - ReadM SNP 0004.scaffold00019 703235 1 A G - ReadM SNP 0004.scaffold00019 703267 1 A G - ReadM SNP 0004.scaffold00019 703432 1 T C - ReadM SNP 0004.scaffold00019 703511 1 C T - ReadM SNP 0004.scaffold00019 703535 1 T C - ReadM SNP 0004.scaffold00019 703639 1 G T - ScafM SNP 0004.scaffold00019 703676 1 A C scaffold11253 ScafM SNP 0004.scaffold00019 703729 1 A C scaffold11253 ScafM SNP 0004.scaffold00019 703732 1 C A scaffold11253 ReadM SNP 0004.scaffold00019 703871 1 A G - ReadM SNP 0004.scaffold00019 704063 1 A T - ReadM SNP 0004.scaffold00019 704468 1 A G - ReadM SNP 0004.scaffold00019 704536 1 T G - ReadM SNP 0004.scaffold00019 704548 1 C T - ScafM SNP 0004.scaffold00019 706461 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 706493 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 706564 1 C T scaffold12348 ReadM SNP 0004.scaffold00019 707327 1 A G - ReadM SNP 0004.scaffold00019 707359 1 A G - ReadM SNP 0004.scaffold00019 707394 1 T A - ReadM SNP 0004.scaffold00019 707702 1 T C - ReadM SNP 0004.scaffold00019 707768 1 T C - ReadM SNP 0004.scaffold00019 707905 1 T C - ReadM SNP 0004.scaffold00019 707940 1 T C - ReadM SNP 0004.scaffold00019 708061 1 T C - ReadM INDEL 0004.scaffold00019 708094 1 . T - ReadM SNP 0004.scaffold00019 708424 1 T C - ReadM SNP 0004.scaffold00019 708471 1 T A - ReadM SNP 0004.scaffold00019 708533 1 A G - ReadM SNP 0004.scaffold00019 708545 1 T C - ReadM SNP 0004.scaffold00019 708566 1 A G - ReadM SNP 0004.scaffold00019 708658 1 G A - ReadM SNP 0004.scaffold00019 708668 1 C T - Both SNP 0004.scaffold00019 708805 1 C T scaffold12348 Both SNP 0004.scaffold00019 708908 1 C T scaffold12348 Both INDEL 0004.scaffold00019 709383 2 .. GT scaffold12348 Both SNP 0004.scaffold00019 709531 1 A G scaffold12348 Both SNP 0004.scaffold00019 709584 1 T C scaffold12348 Both SNP 0004.scaffold00019 709672 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 709928 1 G T scaffold12348 ReadM SNP 0004.scaffold00019 710018 1 G A - Both SNP 0004.scaffold00019 710246 1 G A scaffold12348 Both SNP 0004.scaffold00019 710371 1 G T scaffold12348 Both SNP 0004.scaffold00019 710423 1 T G scaffold12348 Both SNP 0004.scaffold00019 710479 1 C G scaffold12348 Both SNP 0004.scaffold00019 710594 1 A C scaffold12348 Both SNP 0004.scaffold00019 710636 1 C A scaffold12348 Both SNP 0004.scaffold00019 711140 1 G A scaffold12348 Both SNP 0004.scaffold00019 711147 1 C G scaffold12348 Both SNP 0004.scaffold00019 711215 1 A C scaffold12348 Both SNP 0004.scaffold00019 711451 1 A G scaffold12348 Both SNP 0004.scaffold00019 711488 1 T C scaffold12348 Both INDEL 0004.scaffold00019 711552 1 G . scaffold12348 ReadM SNP 0004.scaffold00019 711620 1 A C - ReadM SNP 0004.scaffold00019 711688 1 G A - ReadM SNP 0004.scaffold00019 711691 1 A G - ReadM SNP 0004.scaffold00019 711734 1 C T - ReadM SNP 0004.scaffold00019 711743 1 T C - ReadM SNP 0004.scaffold00019 711835 1 T A - ReadM SNP 0004.scaffold00019 711915 1 T C - ReadM SNP 0004.scaffold00019 711919 1 A G - ReadM SNP 0004.scaffold00019 712259 1 G T - ReadM SNP 0004.scaffold00019 712326 1 T C - ReadM SNP 0004.scaffold00019 712952 1 A C - ReadM SNP 0004.scaffold00019 712958 1 C T - ReadM SNP 0004.scaffold00019 713082 1 A T - ReadM SNP 0004.scaffold00019 713328 1 A G - ReadM SNP 0004.scaffold00019 713404 1 C A - ReadM SNP 0004.scaffold00019 713442 1 G T - ReadM SNP 0004.scaffold00019 713523 1 T C - ReadM SNP 0004.scaffold00019 713694 1 T C - ReadM SNP 0004.scaffold00019 713763 1 G T - ReadM SNP 0004.scaffold00019 713845 1 A G - ScafM INDEL 0004.scaffold00019 714154 1 . T scaffold12348 ScafM SNP 0004.scaffold00019 714205 1 G T scaffold12348 ScafM INDEL 0004.scaffold00019 714342 4 .... TATC scaffold12348 ScafM SNP 0004.scaffold00019 714859 1 A G scaffold12348 ScafM INDEL 0004.scaffold00019 714901 1 . G scaffold12348 Both SNP 0004.scaffold00019 714918 1 T C scaffold12348 ReadM SNP 0004.scaffold00019 714988 1 G A - ReadM SNP 0004.scaffold00019 715091 1 A G - ReadM SNP 0004.scaffold00019 715205 1 C T - ReadM SNP 0004.scaffold00019 715263 1 G A - ReadM SNP 0004.scaffold00019 715397 1 T A - ReadM SNP 0004.scaffold00019 715502 1 G T - ReadM SNP 0004.scaffold00019 715580 1 G T - ReadM SNP 0004.scaffold00019 715605 1 A C - ReadM INDEL 0004.scaffold00019 715711 1 . A - ReadM INDEL 0004.scaffold00019 715877 1 A . - ReadM SNP 0004.scaffold00019 715961 1 T A - ReadM INDEL 0004.scaffold00019 716173 1 C . - ReadM SNP 0004.scaffold00019 716286 1 T C - ReadM SNP 0004.scaffold00019 716925 1 T G - ReadM SNP 0004.scaffold00019 717157 1 T C - ReadM SNP 0004.scaffold00019 717326 1 T G - ReadM SNP 0004.scaffold00019 717534 1 G A - ReadM SNP 0004.scaffold00019 717597 1 A G - ReadM INDEL 0004.scaffold00019 717682 1 . G - ReadM SNP 0004.scaffold00019 717740 1 G A - ReadM SNP 0004.scaffold00019 717933 1 G C - ReadM SNP 0004.scaffold00019 718098 1 C T - ReadM SNP 0004.scaffold00019 718103 1 A G - ReadM SNP 0004.scaffold00019 718139 1 C T - ReadM SNP 0004.scaffold00019 718185 1 A G - ReadM SNP 0004.scaffold00019 718299 1 G A - ReadM SNP 0004.scaffold00019 718437 1 C A - ReadM INDEL 0004.scaffold00019 718573 1 G . - ReadM SNP 0004.scaffold00019 718593 1 G C - ReadM SNP 0004.scaffold00019 718604 1 T C - ReadM SNP 0004.scaffold00019 718662 1 G T - ReadM SNP 0004.scaffold00019 718674 1 A G - ReadM INDEL 0004.scaffold00019 718919 1 A . - ReadM SNP 0004.scaffold00019 718934 1 T C - ReadM SNP 0004.scaffold00019 719096 1 C T - ReadM SNP 0004.scaffold00019 719260 1 T G - ReadM SNP 0004.scaffold00019 719368 1 G A - ReadM SNP 0004.scaffold00019 719609 1 G T - ReadM SNP 0004.scaffold00019 719611 1 G A - ReadM SNP 0004.scaffold00019 719754 1 A G - ReadM SNP 0004.scaffold00019 719969 1 A G - ReadM SNP 0004.scaffold00019 720292 1 A C - ReadM SNP 0004.scaffold00019 720319 1 T C - ReadM SNP 0004.scaffold00019 720358 1 C T - ReadM SNP 0004.scaffold00019 720625 1 G C - ScafM SNP 0004.scaffold00019 720796 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 720836 1 A T scaffold12348 Both SNP 0004.scaffold00019 721119 1 G T scaffold12348 Both SNP 0004.scaffold00019 721438 1 A G scaffold12348 Both SNP 0004.scaffold00019 721466 1 A C scaffold12348 Both SNP 0004.scaffold00019 721483 1 A G scaffold12348 ScafM INDEL 0004.scaffold00019 721547 3 ... CAC scaffold12348 ScafM SNP 0004.scaffold00019 721566 1 G C scaffold12348 Both SNP 0004.scaffold00019 721642 1 C A scaffold12348 Both SNP 0004.scaffold00019 721831 1 T A scaffold12348 Both INDEL 0004.scaffold00019 721860 2 .. TA scaffold12348 ScafM SNP 0004.scaffold00019 721899 1 G C scaffold12348 ScafM SNP 0004.scaffold00019 721946 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 721954 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 721998 1 C A scaffold12348 ScafM SNP 0004.scaffold00019 722116 1 C T scaffold12348 ScafM INDEL 0004.scaffold00019 722400 23 ....................... AAAGTTAGAATGTCAAATTGGTG scaffold12348 ScafM INDEL 0004.scaffold00019 722403 2 .. GA scaffold12348 ReadM SNP 0004.scaffold00019 722723 1 A G - Both SNP 0004.scaffold00019 722743 1 G A scaffold12348 Both SNP 0004.scaffold00019 722869 1 A G scaffold12348 ScafM INDEL 0004.scaffold00019 722907 1 . C scaffold12348 ScafM SNP 0004.scaffold00019 722909 1 T A scaffold12348 ReadM SNP 0004.scaffold00019 723251 1 T C - ReadM SNP 0004.scaffold00019 723272 1 C T - ScafM INDEL 0004.scaffold00019 723384 1 T . scaffold12348 ScafM SNP 0004.scaffold00019 723388 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 723398 1 G A scaffold12348 ScafM INDEL 0004.scaffold00019 723404 3 ... TAC scaffold12348 Both SNP 0004.scaffold00019 723465 1 A G scaffold12348 Both SNP 0004.scaffold00019 723489 1 A G scaffold12348 Both SNP 0004.scaffold00019 723495 1 T A scaffold12348 Both SNP 0004.scaffold00019 723557 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 723809 1 G A scaffold12348 Both SNP 0004.scaffold00019 723849 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 724888 1 G C scaffold12348 ScafM INDEL 0004.scaffold00019 724894 1 . G scaffold12348 ScafM SNP 0004.scaffold00019 724920 1 G C scaffold12348 ScafM INDEL 0004.scaffold00019 724955 1 . C scaffold12348 ScafM SNP 0004.scaffold00019 724969 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 724985 2 TC CT scaffold12348 ScafM SNP 0004.scaffold00019 724998 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 725005 1 C A scaffold12348 ScafM INDEL 0004.scaffold00019 725021 13 ............. ATGGAGGTGCTTG scaffold12348 ScafM INDEL 0004.scaffold00019 725022 3 ... GAA scaffold12348 ScafM SNP 0004.scaffold00019 725045 1 C T scaffold12348 ScafM INDEL 0004.scaffold00019 725055 1 . A scaffold12348 ScafM SNP 0004.scaffold00019 725084 1 A T scaffold12348 ScafM SNP 0004.scaffold00019 725380 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 725426 1 G A scaffold12348 ScafM SNP 0004.scaffold00019 725428 1 T G scaffold12348 Both SNP 0004.scaffold00019 725445 1 C T scaffold12348 Both SNP 0004.scaffold00019 725518 1 A G scaffold12348 Both SNP 0004.scaffold00019 725547 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 725564 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 725576 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 725581 1 T A scaffold12348 ScafM SNP 0004.scaffold00019 725597 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 725639 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 725649 1 A G scaffold12348 ScafM INDEL 0004.scaffold00019 725683 4 TGGT .... scaffold12348 ScafM SNP 0004.scaffold00019 725726 1 G A scaffold12348 ScafM INDEL 0004.scaffold00019 725758 1 A . scaffold12348 ScafM SNP 0004.scaffold00019 725818 1 G C scaffold12348 ScafM SNP 0004.scaffold00019 725846 1 A T scaffold12348 ScafM SNP 0004.scaffold00019 725852 1 A C scaffold12348 ScafM SNP 0004.scaffold00019 725868 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 726334 1 A G scaffold12348 ScafM INDEL 0004.scaffold00019 726340 3 AAG ... scaffold12348 ScafM SNP 0004.scaffold00019 726364 1 C G scaffold12348 ScafM SNP 0004.scaffold00019 726378 1 C G scaffold12348 ScafM SNP 0004.scaffold00019 726414 1 C G scaffold12348 ScafM SNP 0004.scaffold00019 726419 1 A C scaffold12348 ScafM SNP 0004.scaffold00019 726422 1 G T scaffold12348 ScafM SNP 0004.scaffold00019 726451 1 G A scaffold12348 ScafM SNP 0004.scaffold00019 726478 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 726496 1 C A scaffold12348 ScafM SNP 0004.scaffold00019 726574 1 G A scaffold12348 ScafM SNP 0004.scaffold00019 726580 1 T G scaffold12348 ScafM SNP 0004.scaffold00019 726679 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 726695 1 G T scaffold12348 ScafM SNP 0004.scaffold00019 726706 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 726710 1 C G scaffold12348 ScafM INDEL 0004.scaffold00019 726768 8 ........ AACTATAC scaffold12348 ScafM SNP 0004.scaffold00019 726789 1 T C scaffold12348 ScafM INDEL 0004.scaffold00019 726824 1 . T scaffold12348 ScafM SNP 0004.scaffold00019 726832 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 726856 1 C T scaffold12348 ScafM SNP 0004.scaffold00019 726886 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 726897 1 T C scaffold12348 ScafM SNP 0004.scaffold00019 726907 1 A G scaffold12348 ScafM SNP 0004.scaffold00019 726922 1 G A scaffold12348 ScafM SNP 0004.scaffold00019 726973 1 A C scaffold12348 ScafM SNP 0004.scaffold00019 726995 3 ACT GAA scaffold12348 ScafM SNP 0004.scaffold00019 727133 1 T A scaffold12348 ScafM SNP 0004.scaffold00019 727490 1 C T C13415309 ScafM SNP 0004.scaffold00019 727495 1 A C C13415309 ScafM INDEL 0004.scaffold00019 727571 6 ...... ACAATG C13415309 ScafM SNP 0004.scaffold00019 727611 3 TTT AAA C13415309 ScafM SNP 0004.scaffold00019 727981 1 T C C13415309 ScafM SNP 0004.scaffold00019 728800 1 C A scaffold26765 ScafM SNP 0004.scaffold00019 728837 1 C T scaffold26765 ScafM SNP 0004.scaffold00019 728905 2 CG AA scaffold26765 ScafM INDEL 0004.scaffold00019 728908 1 . T scaffold26765 ScafM SNP 0004.scaffold00019 728917 1 T A scaffold26765 ScafM SNP 0004.scaffold00019 728920 1 A T scaffold26765 ScafM INDEL 0004.scaffold00019 728924 2 GA .C scaffold26765 ScafM SNP 0004.scaffold00019 728940 2 CT AA scaffold26765 ScafM SNP 0004.scaffold00019 729341 1 C G scaffold26765 ScafM SNP 0004.scaffold00019 729400 1 C T scaffold26765 ScafM SNP 0004.scaffold00019 729410 2 TA CC scaffold26765 ScafM SNP 0004.scaffold00019 729414 1 T C scaffold26765 Both SNP 0004.scaffold00019 729642 1 T C scaffold26765 Both SNP 0004.scaffold00019 729902 1 G C scaffold26765 ScafM SNP 0004.scaffold00019 729946 1 C A scaffold26765 ScafM SNP 0004.scaffold00019 729972 1 G A scaffold26765 ScafM SNP 0004.scaffold00019 729977 1 T C scaffold26765 ScafM SNP 0004.scaffold00019 729989 1 A C scaffold26765 ScafM SNP 0004.scaffold00019 729995 1 C T scaffold26765 ReadM SNP 0004.scaffold00019 733209 1 T C - ReadM SNP 0004.scaffold00019 733213 1 A G - ReadM INDEL 0004.scaffold00019 733485 2 .. TT - ReadM SNP 0004.scaffold00019 733530 1 T A - ScafM SNP 0004.scaffold00019 733972 1 G A scaffold26765 ScafM SNP 0004.scaffold00019 733975 1 A G scaffold26765 ScafM INDEL 0004.scaffold00019 733982 1 G . scaffold26765 ScafM SNP 0004.scaffold00019 733989 1 T A scaffold26765 ScafM SNP 0004.scaffold00019 734000 1 G A scaffold26765 ScafM SNP 0004.scaffold00019 734114 1 A G scaffold26765 ScafM INDEL 0004.scaffold00019 734126 12 CTAGAAAATGTA ............ scaffold26765 ScafM SNP 0004.scaffold00019 734157 1 C G scaffold26765 ScafM SNP 0004.scaffold00019 734174 1 T C scaffold26765 ScafM INDEL 0004.scaffold00019 734220 3 ... TTT scaffold26765 ReadM INDEL 0004.scaffold00019 734332 1 . A - ReadM SNP 0004.scaffold00019 734357 1 C T - ReadM SNP 0004.scaffold00019 734439 1 T C - ReadM SNP 0004.scaffold00019 734460 1 G A - ReadM SNP 0004.scaffold00019 734530 1 T C - ReadM SNP 0004.scaffold00019 734564 1 A G - ReadM SNP 0004.scaffold00019 734656 1 G T - ScafM SNP 0004.scaffold00019 748219 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 748238 1 G A scaffold6154 ReadM SNP 0004.scaffold00019 748372 1 A T - Both SNP 0004.scaffold00019 748923 1 A T scaffold6154 ScafM SNP 0004.scaffold00019 748965 1 C T scaffold6154 ReadM SNP 0004.scaffold00019 749361 1 T C - ReadM SNP 0004.scaffold00019 749396 1 T A - ReadM SNP 0004.scaffold00019 749530 1 T C - ReadM SNP 0004.scaffold00019 749549 1 T C - ReadM SNP 0004.scaffold00019 749563 1 C T - ScafM SNP 0004.scaffold00019 749610 1 T A scaffold6154 ScafM INDEL 0004.scaffold00019 749617 1 A . scaffold6154 ScafM SNP 0004.scaffold00019 749621 1 T C scaffold6154 ScafM INDEL 0004.scaffold00019 749794 10 .......... CCCCCCCACC scaffold6154 ScafM SNP 0004.scaffold00019 749811 1 C T scaffold6154 ScafM INDEL 0004.scaffold00019 749842 3 ... GAG scaffold6154 Both SNP 0004.scaffold00019 749898 1 A G scaffold6154 Both SNP 0004.scaffold00019 750034 1 T C scaffold6154 Both SNP 0004.scaffold00019 750055 1 A C scaffold6154 ReadM SNP 0004.scaffold00019 750100 1 A G - Both SNP 0004.scaffold00019 750184 1 A G scaffold6154 Both INDEL 0004.scaffold00019 750241 1 T . scaffold6154 Both SNP 0004.scaffold00019 750320 1 A T scaffold6154 Both SNP 0004.scaffold00019 750335 1 A T scaffold6154 Both SNP 0004.scaffold00019 750395 1 A C scaffold6154 Both SNP 0004.scaffold00019 750399 1 A C scaffold6154 Both INDEL 0004.scaffold00019 750430 1 G . scaffold6154 ScafM SNP 0004.scaffold00019 750479 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 750527 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 750529 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 750643 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 750694 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 750710 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 750782 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 750810 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 750817 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 750828 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 750864 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 750866 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 750872 2 CG TA scaffold6154 ScafM SNP 0004.scaffold00019 750892 2 TA AG scaffold6154 ScafM SNP 0004.scaffold00019 750922 1 G C scaffold6154 Both SNP 0004.scaffold00019 750993 1 A T scaffold6154 ScafM SNP 0004.scaffold00019 751024 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 751321 1 A C scaffold22093 ScafM SNP 0004.scaffold00019 751329 1 T C scaffold22093 ScafM SNP 0004.scaffold00019 751338 1 A G scaffold22093 ScafM SNP 0004.scaffold00019 751341 1 C T scaffold22093 ScafM SNP 0004.scaffold00019 751361 1 C T scaffold22093 ScafM INDEL 0004.scaffold00019 751405 1 G . scaffold22093 ScafM INDEL 0004.scaffold00019 751408 1 C . scaffold22093 ScafM SNP 0004.scaffold00019 751425 2 CC GG scaffold22093 ScafM SNP 0004.scaffold00019 751433 1 T C scaffold22093 ScafM SNP 0004.scaffold00019 751455 1 T C scaffold22093 ScafM SNP 0004.scaffold00019 751466 1 G T scaffold22093 ScafM SNP 0004.scaffold00019 751470 1 C A scaffold22093 ScafM SNP 0004.scaffold00019 751472 1 C T scaffold22093 ReadM SNP 0004.scaffold00019 751480 1 C A - ScafM SNP 0004.scaffold00019 751486 1 C T scaffold22093 ScafM SNP 0004.scaffold00019 751492 1 C G scaffold22093 ScafM SNP 0004.scaffold00019 751495 1 G T scaffold22093 ScafM SNP 0004.scaffold00019 751497 1 A T scaffold22093 ScafM SNP 0004.scaffold00019 751500 1 A G scaffold22093 ScafM INDEL 0004.scaffold00019 751527 1 C . scaffold22093 ScafM SNP 0004.scaffold00019 751539 1 G A scaffold22093 ScafM SNP 0004.scaffold00019 751541 1 G T scaffold22093 ScafM SNP 0004.scaffold00019 751545 1 C T scaffold22093 ScafM INDEL 0004.scaffold00019 751551 2 CA .. scaffold22093 ScafM SNP 0004.scaffold00019 751554 1 A G scaffold22093 ScafM SNP 0004.scaffold00019 751556 1 T C scaffold22093 ScafM INDEL 0004.scaffold00019 751560 1 T . scaffold22093 ScafM SNP 0004.scaffold00019 751567 1 A G scaffold22093 ReadM SNP 0004.scaffold00019 751570 1 T C - ReadM SNP 0004.scaffold00019 751690 1 A T - ReadM INDEL 0004.scaffold00019 751730 1 G . - ReadM SNP 0004.scaffold00019 751820 1 T C - ReadM SNP 0004.scaffold00019 751831 1 A G - ReadM SNP 0004.scaffold00019 752111 1 C A - ReadM INDEL 0004.scaffold00019 752112 1 . T - ReadM INDEL 0004.scaffold00019 752276 1 . C - ScafM INDEL 0004.scaffold00019 752443 1 . T scaffold6154 ScafM SNP 0004.scaffold00019 752822 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 752824 1 G A scaffold6154 ScafM INDEL 0004.scaffold00019 752826 3 CTT ... scaffold6154 ScafM SNP 0004.scaffold00019 752832 1 T A scaffold6154 ReadM SNP 0004.scaffold00019 753333 1 G C - ReadM SNP 0004.scaffold00019 753352 1 C T - ScafM SNP 0004.scaffold00019 762642 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 762674 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 762676 1 G T scaffold6154 ScafM SNP 0004.scaffold00019 762689 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 762731 1 C A scaffold6154 ScafM SNP 0004.scaffold00019 762786 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 762836 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 762855 1 A T scaffold6154 ScafM SNP 0004.scaffold00019 762861 1 G T scaffold6154 ScafM SNP 0004.scaffold00019 762877 1 G T scaffold6154 ScafM SNP 0004.scaffold00019 762908 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 763001 2 CA TT scaffold6154 ScafM SNP 0004.scaffold00019 763051 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 763123 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 763157 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 763172 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 763177 1 A T scaffold6154 ScafM SNP 0004.scaffold00019 763277 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 763280 1 A G scaffold6154 ScafM INDEL 0004.scaffold00019 763287 5 TAATT ....C scaffold6154 Both SNP 0004.scaffold00019 763361 1 T A scaffold6154 ScafM INDEL 0004.scaffold00019 763496 9 TAATGCTTT ......... scaffold6154 ScafM INDEL 0004.scaffold00019 763506 1 T . scaffold6154 ScafM SNP 0004.scaffold00019 763514 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 763531 1 T C scaffold6154 Both SNP 0004.scaffold00019 763663 1 T C scaffold6154 Both SNP 0004.scaffold00019 763763 1 C G scaffold6154 Both SNP 0004.scaffold00019 763793 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 763819 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 763824 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 763837 1 T A scaffold6154 Both SNP 0004.scaffold00019 763863 1 G A scaffold6154 Both SNP 0004.scaffold00019 763884 1 C T scaffold6154 Both SNP 0004.scaffold00019 763906 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 763959 1 A G scaffold6154 ScafM INDEL 0004.scaffold00019 763961 4 .... CGCA scaffold6154 ScafM SNP 0004.scaffold00019 763974 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 763999 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 764003 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 764015 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 764033 1 A G scaffold6154 ReadM SNP 0004.scaffold00019 764093 1 G T - ReadM SNP 0004.scaffold00019 764157 1 G A - ReadM SNP 0004.scaffold00019 764179 1 A C - ReadM SNP 0004.scaffold00019 764472 1 C T - ReadM SNP 0004.scaffold00019 764492 1 G A - ReadM SNP 0004.scaffold00019 764555 1 T G - ReadM SNP 0004.scaffold00019 764576 1 G T - ReadM SNP 0004.scaffold00019 764578 1 G T - ReadM SNP 0004.scaffold00019 764652 1 A G - ReadM SNP 0004.scaffold00019 764753 1 A G - ReadM SNP 0004.scaffold00019 764810 1 A G - ReadM INDEL 0004.scaffold00019 764882 2 AA .. - ReadM INDEL 0004.scaffold00019 764948 1 T . - ReadM SNP 0004.scaffold00019 764972 1 C T - ReadM SNP 0004.scaffold00019 765018 1 T C - ReadM SNP 0004.scaffold00019 765079 1 T A - ReadM SNP 0004.scaffold00019 765081 1 T A - ReadM SNP 0004.scaffold00019 765104 1 G C - ReadM SNP 0004.scaffold00019 765194 1 G A - ReadM SNP 0004.scaffold00019 765302 1 G A - ReadM SNP 0004.scaffold00019 765364 1 G C - ReadM SNP 0004.scaffold00019 765387 1 G C - ReadM SNP 0004.scaffold00019 765425 1 A G - ReadM SNP 0004.scaffold00019 765550 1 A G - ReadM SNP 0004.scaffold00019 765555 1 C A - ReadM INDEL 0004.scaffold00019 765595 2 AA .. - ReadM SNP 0004.scaffold00019 765634 1 C G - ReadM SNP 0004.scaffold00019 766322 1 C A - ReadM SNP 0004.scaffold00019 766360 1 A G - ReadM SNP 0004.scaffold00019 766439 1 T A - ReadM SNP 0004.scaffold00019 766549 1 T A - ReadM SNP 0004.scaffold00019 766681 1 C A - ReadM SNP 0004.scaffold00019 766689 1 C T - ReadM SNP 0004.scaffold00019 766734 1 G T - ReadM SNP 0004.scaffold00019 766787 1 A T - ReadM SNP 0004.scaffold00019 767180 1 G T - Both SNP 0004.scaffold00019 767252 1 T C scaffold6154 Both SNP 0004.scaffold00019 767293 1 C T scaffold6154 Both SNP 0004.scaffold00019 767307 1 G A scaffold6154 Both SNP 0004.scaffold00019 767325 1 T C scaffold6154 Both SNP 0004.scaffold00019 767599 1 A T scaffold6154 ScafM SNP 0004.scaffold00019 767641 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 767649 1 G A scaffold6154 ScafM INDEL 0004.scaffold00019 767657 1 T . scaffold6154 ScafM SNP 0004.scaffold00019 767661 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 767675 1 T C scaffold6154 Both SNP 0004.scaffold00019 767696 1 G A scaffold6154 Both SNP 0004.scaffold00019 767702 1 T C scaffold6154 Both SNP 0004.scaffold00019 767798 1 C T scaffold6154 Both SNP 0004.scaffold00019 767805 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 767847 1 G T scaffold6154 ScafM SNP 0004.scaffold00019 767854 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 767859 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 767926 1 A G scaffold6154 ScafM INDEL 0004.scaffold00019 767949 2 GT .. scaffold6154 ScafM INDEL 0004.scaffold00019 767956 2 AG .. scaffold6154 ScafM INDEL 0004.scaffold00019 767962 9 ACGGGGCAG ......... scaffold6154 ScafM INDEL 0004.scaffold00019 767974 6 AAGCGA ...... scaffold6154 ScafM SNP 0004.scaffold00019 768004 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 768006 1 G C scaffold6154 ScafM SNP 0004.scaffold00019 768015 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 768030 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 768042 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 768049 1 A C scaffold6154 Both SNP 0004.scaffold00019 768113 1 A G scaffold6154 Both SNP 0004.scaffold00019 768115 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 768204 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 768211 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 768215 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 768222 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 768224 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 768232 1 G A scaffold6154 ReadM SNP 0004.scaffold00019 768291 1 G C - ReadM SNP 0004.scaffold00019 768307 1 C A - ReadM SNP 0004.scaffold00019 768324 1 C A - ReadM SNP 0004.scaffold00019 768366 1 T C - ReadM SNP 0004.scaffold00019 768411 1 T G - ReadM SNP 0004.scaffold00019 768425 1 A G - ReadM SNP 0004.scaffold00019 768568 1 A G - Both SNP 0004.scaffold00019 768585 1 A C scaffold6154 Both SNP 0004.scaffold00019 768601 1 A G scaffold6154 ReadM SNP 0004.scaffold00019 768886 1 C T - Both SNP 0004.scaffold00019 769010 1 C G scaffold6154 Both SNP 0004.scaffold00019 769034 1 C A scaffold6154 Both SNP 0004.scaffold00019 769065 1 C T scaffold6154 Both SNP 0004.scaffold00019 769100 1 G C scaffold6154 Both SNP 0004.scaffold00019 769263 1 A G scaffold6154 Both SNP 0004.scaffold00019 769296 1 G T scaffold6154 Both SNP 0004.scaffold00019 769354 1 A G scaffold6154 Both SNP 0004.scaffold00019 769389 1 T A scaffold6154 Both SNP 0004.scaffold00019 769431 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 769511 2 TC CT scaffold6154 ScafM INDEL 0004.scaffold00019 769515 1 . G scaffold6154 ScafM SNP 0004.scaffold00019 769539 1 G T scaffold6154 Both INDEL 0004.scaffold00019 769661 1 . G scaffold6154 ScafM SNP 0004.scaffold00019 769663 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 769706 1 C T scaffold6154 ScafM INDEL 0004.scaffold00019 769721 2 .. GA scaffold6154 ScafM SNP 0004.scaffold00019 769734 1 A G scaffold6154 Both SNP 0004.scaffold00019 769796 1 G T scaffold6154 ScafM INDEL 0004.scaffold00019 769831 1 A . scaffold6154 ReadM SNP 0004.scaffold00019 769899 1 T C - ScafM SNP 0004.scaffold00019 769977 1 C A scaffold6154 ScafM INDEL 0004.scaffold00019 769982 3 ... CTT scaffold6154 ReadM SNP 0004.scaffold00019 770474 1 T A - ReadM SNP 0004.scaffold00019 770887 1 T A - ReadM SNP 0004.scaffold00019 773527 1 A G - Both SNP 0004.scaffold00019 773578 1 A C scaffold6154 Both SNP 0004.scaffold00019 773607 1 A G scaffold6154 Both SNP 0004.scaffold00019 773622 1 A C scaffold6154 Both SNP 0004.scaffold00019 773681 1 A G scaffold6154 Both SNP 0004.scaffold00019 773689 1 A G scaffold6154 ReadM SNP 0004.scaffold00019 773871 1 A G - ReadM SNP 0004.scaffold00019 774363 1 T C - ReadM SNP 0004.scaffold00019 774594 1 T C - Both SNP 0004.scaffold00019 775131 1 G A scaffold6154 Both SNP 0004.scaffold00019 775136 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 775250 2 CG TA scaffold6154 ScafM SNP 0004.scaffold00019 775259 1 G T scaffold6154 Both SNP 0004.scaffold00019 775291 1 C G scaffold6154 Both INDEL 0004.scaffold00019 775364 1 A . scaffold6154 Both SNP 0004.scaffold00019 775370 1 G A scaffold6154 Both SNP 0004.scaffold00019 775457 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 775539 1 T G scaffold6154 ScafM INDEL 0004.scaffold00019 775546 1 A . scaffold6154 ScafM SNP 0004.scaffold00019 775559 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 775616 1 A G scaffold6154 ScafM INDEL 0004.scaffold00019 775622 2 .. CA scaffold6154 ScafM SNP 0004.scaffold00019 776340 2 TC AA scaffold2348 ScafM SNP 0004.scaffold00019 776343 1 G C scaffold2348 ScafM SNP 0004.scaffold00019 776353 2 AT CC scaffold2348 ScafM SNP 0004.scaffold00019 776363 1 T C scaffold2348 ScafM SNP 0004.scaffold00019 776386 1 A C scaffold2348 ScafM SNP 0004.scaffold00019 776390 1 G A scaffold2348 ScafM SNP 0004.scaffold00019 776412 1 G T scaffold2348 ScafM SNP 0004.scaffold00019 776414 1 G C scaffold2348 ScafM SNP 0004.scaffold00019 776423 2 CA AG scaffold2348 ScafM SNP 0004.scaffold00019 776428 1 T C scaffold2348 ScafM SNP 0004.scaffold00019 776478 1 T C scaffold2348 ScafM SNP 0004.scaffold00019 776496 1 T C scaffold2348 ScafM INDEL 0004.scaffold00019 777404 3 ATA ... scaffold9501 ScafM SNP 0004.scaffold00019 777431 1 G A scaffold9501 ScafM SNP 0004.scaffold00019 777434 1 C A scaffold9501 ScafM SNP 0004.scaffold00019 777465 1 T A scaffold9501 ScafM SNP 0004.scaffold00019 777485 1 T C scaffold9501 ScafM SNP 0004.scaffold00019 777493 1 A G scaffold9501 ScafM SNP 0004.scaffold00019 777496 1 T G scaffold9501 ScafM SNP 0004.scaffold00019 777507 1 G A scaffold9501 ScafM INDEL 0004.scaffold00019 777512 2 TT .. scaffold9501 ScafM SNP 0004.scaffold00019 777518 1 A G scaffold9501 ScafM SNP 0004.scaffold00019 777525 1 A T scaffold9501 ScafM SNP 0004.scaffold00019 777545 1 A T scaffold9501 ScafM SNP 0004.scaffold00019 777562 1 A C scaffold9501 ScafM SNP 0004.scaffold00019 777577 1 T A scaffold9501 ScafM SNP 0004.scaffold00019 777594 1 A G scaffold9501 ScafM SNP 0004.scaffold00019 777604 1 C A scaffold9501 ScafM SNP 0004.scaffold00019 777611 1 T C scaffold9501 ScafM SNP 0004.scaffold00019 777619 1 C T scaffold9501 ScafM SNP 0004.scaffold00019 777663 1 T A scaffold9501 ScafM SNP 0004.scaffold00019 777687 1 A G scaffold9501 ScafM SNP 0004.scaffold00019 777702 1 T C scaffold9501 ScafM SNP 0004.scaffold00019 777707 1 C T scaffold9501 ScafM SNP 0004.scaffold00019 777717 1 A G scaffold9501 ScafM SNP 0004.scaffold00019 777732 1 G A scaffold9501 ReadM SNP 0004.scaffold00019 791478 1 T G - ReadM SNP 0004.scaffold00019 791486 2 CC TG - ReadM SNP 0004.scaffold00019 792155 1 C G - ReadM SNP 0004.scaffold00019 792315 1 G A - ReadM SNP 0004.scaffold00019 797894 1 A G - ReadM SNP 0004.scaffold00019 797899 1 A C - ReadM SNP 0004.scaffold00019 797938 1 G A - ReadM SNP 0004.scaffold00019 797969 1 A C - ReadM SNP 0004.scaffold00019 798071 1 A G - ReadM SNP 0004.scaffold00019 798155 1 A C - ReadM SNP 0004.scaffold00019 798399 1 C T - ReadM SNP 0004.scaffold00019 798404 1 C T - Both SNP 0004.scaffold00019 798434 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 798465 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 798492 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 798498 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 798503 1 A G scaffold6154 Both SNP 0004.scaffold00019 798618 1 C G scaffold6154 Both SNP 0004.scaffold00019 798642 1 C G scaffold6154 ScafM SNP 0004.scaffold00019 798662 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 798668 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 798722 1 G A scaffold6154 ScafM INDEL 0004.scaffold00019 798769 10 .......... AGAATGACGA scaffold6154 ScafM SNP 0004.scaffold00019 798813 1 C T scaffold6154 Both SNP 0004.scaffold00019 798851 1 C G scaffold6154 Both SNP 0004.scaffold00019 798869 1 A G scaffold6154 Both SNP 0004.scaffold00019 798885 1 A G scaffold6154 Both SNP 0004.scaffold00019 798927 1 A G scaffold6154 Both SNP 0004.scaffold00019 798985 2 TA CG scaffold6154 Both SNP 0004.scaffold00019 799024 1 G T scaffold6154 Both INDEL 0004.scaffold00019 799063 1 T . scaffold6154 Both SNP 0004.scaffold00019 799187 1 A G scaffold6154 Both SNP 0004.scaffold00019 799242 1 A G scaffold6154 Both SNP 0004.scaffold00019 799293 1 A G scaffold6154 Both SNP 0004.scaffold00019 799343 1 C G scaffold6154 Both SNP 0004.scaffold00019 799357 1 T A scaffold6154 Both SNP 0004.scaffold00019 799524 1 T A scaffold6154 Both SNP 0004.scaffold00019 799564 1 T G scaffold6154 Both SNP 0004.scaffold00019 799589 1 A G scaffold6154 Both SNP 0004.scaffold00019 799761 1 G A scaffold6154 Both SNP 0004.scaffold00019 799772 1 T G scaffold6154 Both SNP 0004.scaffold00019 799775 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 799817 1 C G scaffold6154 ScafM SNP 0004.scaffold00019 799842 1 A G scaffold6154 Both SNP 0004.scaffold00019 799863 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 799885 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 799897 1 G C scaffold6154 ScafM SNP 0004.scaffold00019 799953 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 799962 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 799968 1 T G scaffold6154 ScafM SNP 0004.scaffold00019 799977 1 G T scaffold6154 Both SNP 0004.scaffold00019 800001 1 C T scaffold6154 Both SNP 0004.scaffold00019 800026 1 C T scaffold6154 Both SNP 0004.scaffold00019 800045 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800091 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800095 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 800107 1 A G scaffold6154 Both SNP 0004.scaffold00019 800131 1 T G scaffold6154 Both SNP 0004.scaffold00019 800147 1 T C scaffold6154 Both SNP 0004.scaffold00019 800186 1 T C scaffold6154 Both SNP 0004.scaffold00019 800237 1 A C scaffold6154 Both SNP 0004.scaffold00019 800268 1 C T scaffold6154 Both SNP 0004.scaffold00019 800308 1 C G scaffold6154 ScafM SNP 0004.scaffold00019 800326 1 C G scaffold6154 ScafM SNP 0004.scaffold00019 800337 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 800351 1 G A scaffold6154 Both SNP 0004.scaffold00019 800371 1 C A scaffold6154 Both SNP 0004.scaffold00019 800385 1 G A scaffold6154 Both SNP 0004.scaffold00019 800439 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800469 2 TG CA scaffold6154 ScafM SNP 0004.scaffold00019 800477 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 800496 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 800503 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 800505 1 G C scaffold6154 Both SNP 0004.scaffold00019 800543 1 C T scaffold6154 Both SNP 0004.scaffold00019 800572 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 800612 1 G C scaffold6154 ScafM SNP 0004.scaffold00019 800616 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 800638 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800643 2 CG TA scaffold6154 ScafM SNP 0004.scaffold00019 800664 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 800713 1 C A scaffold6154 ScafM SNP 0004.scaffold00019 800733 2 CT TA scaffold6154 ScafM SNP 0004.scaffold00019 800743 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800761 2 CC AT scaffold6154 ScafM SNP 0004.scaffold00019 800787 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 800792 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 800794 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 800796 1 G T scaffold6154 Both SNP 0004.scaffold00019 800821 1 G A scaffold6154 Both SNP 0004.scaffold00019 800904 1 T C scaffold6154 Both SNP 0004.scaffold00019 800975 1 C T scaffold6154 Both SNP 0004.scaffold00019 801012 1 T C scaffold6154 Both SNP 0004.scaffold00019 801112 1 A C scaffold6154 Both SNP 0004.scaffold00019 801138 1 G A scaffold6154 Both SNP 0004.scaffold00019 801148 1 A G scaffold6154 Both SNP 0004.scaffold00019 801304 1 G A scaffold6154 Both SNP 0004.scaffold00019 801311 1 G A scaffold6154 Both SNP 0004.scaffold00019 801324 1 T C scaffold6154 Both SNP 0004.scaffold00019 801387 1 A C scaffold6154 Both SNP 0004.scaffold00019 801401 1 C A scaffold6154 Both SNP 0004.scaffold00019 801410 1 T C scaffold6154 Both SNP 0004.scaffold00019 801445 1 G T scaffold6154 Both SNP 0004.scaffold00019 801465 1 C A scaffold6154 Both SNP 0004.scaffold00019 801477 1 C A scaffold6154 Both SNP 0004.scaffold00019 801654 1 T C scaffold6154 Both SNP 0004.scaffold00019 801675 1 G T scaffold6154 Both SNP 0004.scaffold00019 801680 1 A G scaffold6154 Both SNP 0004.scaffold00019 801735 1 C T scaffold6154 Both SNP 0004.scaffold00019 801747 1 A T scaffold6154 Both SNP 0004.scaffold00019 801792 1 A G scaffold6154 Both SNP 0004.scaffold00019 801921 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 802049 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 802051 1 G C scaffold6154 Both SNP 0004.scaffold00019 802101 1 T A scaffold6154 Both SNP 0004.scaffold00019 802306 1 A C scaffold6154 Both SNP 0004.scaffold00019 802342 1 G A scaffold6154 Both SNP 0004.scaffold00019 802347 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 802413 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 802498 1 T C scaffold6154 Both SNP 0004.scaffold00019 802527 1 T C scaffold6154 Both SNP 0004.scaffold00019 802548 1 T C scaffold6154 Both SNP 0004.scaffold00019 802584 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 802592 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 802606 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 802667 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 802671 1 G A scaffold6154 Both SNP 0004.scaffold00019 802704 1 T C scaffold6154 ReadM SNP 0004.scaffold00019 802709 1 A G - ScafM SNP 0004.scaffold00019 802717 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 802770 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 802779 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 802784 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 802815 1 T A scaffold6154 Both SNP 0004.scaffold00019 802917 1 C T scaffold6154 Both SNP 0004.scaffold00019 802941 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 802991 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 803008 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 803023 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 803028 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 803033 1 T C scaffold6154 Both SNP 0004.scaffold00019 803071 1 G T scaffold6154 Both SNP 0004.scaffold00019 803124 1 G A scaffold6154 Both SNP 0004.scaffold00019 803154 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 803221 2 TG CA scaffold6154 Both SNP 0004.scaffold00019 803280 1 T G scaffold6154 ReadM SNP 0004.scaffold00019 803359 1 A T - ReadM SNP 0004.scaffold00019 803442 1 G T - ReadM SNP 0004.scaffold00019 803462 1 G T - ReadM SNP 0004.scaffold00019 803502 1 C G - ReadM SNP 0004.scaffold00019 803540 1 G A - ReadM SNP 0004.scaffold00019 803573 1 C G - ReadM SNP 0004.scaffold00019 803596 1 A T - ReadM SNP 0004.scaffold00019 803616 1 G A - ReadM SNP 0004.scaffold00019 803665 1 A G - ReadM SNP 0004.scaffold00019 803672 1 A T - ReadM SNP 0004.scaffold00019 803737 1 G A - ReadM SNP 0004.scaffold00019 803743 1 C T - ReadM SNP 0004.scaffold00019 803752 1 A G - ReadM SNP 0004.scaffold00019 803875 1 A C - ReadM SNP 0004.scaffold00019 803885 1 A C - ReadM SNP 0004.scaffold00019 804280 1 G A - ReadM SNP 0004.scaffold00019 804434 1 G A - ReadM SNP 0004.scaffold00019 804451 1 A C - ReadM SNP 0004.scaffold00019 804508 1 C T - ReadM SNP 0004.scaffold00019 804526 1 T C - ReadM SNP 0004.scaffold00019 804564 1 A G - ReadM SNP 0004.scaffold00019 804593 1 C A - ReadM SNP 0004.scaffold00019 804645 1 C T - ReadM SNP 0004.scaffold00019 804711 1 T A - ReadM SNP 0004.scaffold00019 804796 1 T G - ReadM SNP 0004.scaffold00019 804889 1 G A - ReadM SNP 0004.scaffold00019 804909 1 C T - ReadM SNP 0004.scaffold00019 804964 1 T G - ReadM SNP 0004.scaffold00019 805007 1 C T - ReadM SNP 0004.scaffold00019 805012 1 A G - ReadM INDEL 0004.scaffold00019 805066 1 . G - ReadM SNP 0004.scaffold00019 805354 1 C T - ReadM SNP 0004.scaffold00019 805357 1 C A - ReadM SNP 0004.scaffold00019 805391 1 C T - ScafM SNP 0004.scaffold00019 805478 1 C T scaffold6154 Both SNP 0004.scaffold00019 805486 1 C T scaffold6154 Both SNP 0004.scaffold00019 805537 1 A T scaffold6154 ReadM SNP 0004.scaffold00019 805836 1 A G - ReadM SNP 0004.scaffold00019 805841 1 A G - ReadM SNP 0004.scaffold00019 805996 1 T C - ReadM SNP 0004.scaffold00019 806028 1 G C - ReadM SNP 0004.scaffold00019 806123 1 A T - ReadM SNP 0004.scaffold00019 806255 1 G C - Both SNP 0004.scaffold00019 806320 1 T C scaffold6154 Both SNP 0004.scaffold00019 806331 1 G A scaffold6154 ScafM SNP 0004.scaffold00019 806349 1 C G scaffold6154 ScafM SNP 0004.scaffold00019 806356 1 T G scaffold6154 Both SNP 0004.scaffold00019 806390 1 C T scaffold6154 ReadM SNP 0004.scaffold00019 806430 1 C A - ReadM SNP 0004.scaffold00019 806464 1 T C - ReadM SNP 0004.scaffold00019 806541 1 T A - ScafM SNP 0004.scaffold00019 806583 2 CT AC scaffold6154 ScafM INDEL 0004.scaffold00019 806598 1 C . scaffold6154 ScafM SNP 0004.scaffold00019 806624 1 T A scaffold6154 ScafM SNP 0004.scaffold00019 806627 1 C T scaffold6154 Both SNP 0004.scaffold00019 806677 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 806750 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 806836 1 T C scaffold6154 ScafM SNP 0004.scaffold00019 806838 1 A G scaffold6154 ScafM SNP 0004.scaffold00019 806845 1 C T scaffold6154 ScafM SNP 0004.scaffold00019 806880 1 A C scaffold6154 ScafM SNP 0004.scaffold00019 806890 1 A T scaffold6154 ScafM SNP 0005.scaffold00021 13 1 A G scaffold2135 ReadM SNP 0005.scaffold00021 357 1 A G - ReadM SNP 0005.scaffold00021 426 1 T G - ScafM SNP 0005.scaffold00021 1072 1 T C scaffold2135 ScafM SNP 0005.scaffold00021 1398 1 G T scaffold2135 ScafM SNP 0005.scaffold00021 6264 1 C T scaffold2135 ScafM SNP 0005.scaffold00021 6335 1 G A scaffold2135 Both SNP 0005.scaffold00021 6625 1 A T scaffold2135 ScafM SNP 0005.scaffold00021 6698 1 T A scaffold2135 ScafM SNP 0005.scaffold00021 6713 1 G A scaffold2135 Both SNP 0005.scaffold00021 6831 1 G C scaffold2135 Both INDEL 0005.scaffold00021 7628 1 T . scaffold2135 ScafM SNP 0005.scaffold00021 7677 1 G A scaffold2135 ScafM INDEL 0005.scaffold00021 7682 1 A . scaffold2135 ScafM SNP 0005.scaffold00021 7796 1 C T scaffold2135 ReadM SNP 0005.scaffold00021 7948 1 C T - ReadM SNP 0005.scaffold00021 8299 1 T C - ScafM SNP 0005.scaffold00021 8627 1 A G scaffold2135 ScafM INDEL 0005.scaffold00021 9358 26 GGGGAGGGTGCAAAAACTGTGGGGTT .......................... scaffold2135 Both SNP 0005.scaffold00021 9406 1 A T scaffold2135 Both SNP 0005.scaffold00021 9827 1 C T scaffold2135 Both SNP 0005.scaffold00021 9910 1 G T scaffold2135 Both SNP 0005.scaffold00021 10125 1 G T scaffold2135 Both SNP 0005.scaffold00021 10130 1 A G scaffold2135 Both SNP 0005.scaffold00021 10305 1 A G scaffold2135 ScafM SNP 0005.scaffold00021 10599 1 G C scaffold2135 ScafM INDEL 0005.scaffold00021 10675 1 . T scaffold2135 ReadM SNP 0005.scaffold00021 11331 1 T A - ReadM SNP 0005.scaffold00021 11617 1 T C - ReadM SNP 0005.scaffold00021 11712 1 T C - ScafM SNP 0005.scaffold00021 11824 1 G A scaffold2135 ScafM INDEL 0005.scaffold00021 11826 2 .. AA scaffold2135 ScafM SNP 0005.scaffold00021 11854 1 G A scaffold2135 ReadM SNP 0005.scaffold00021 12027 2 TT CC - ReadM SNP 0005.scaffold00021 12047 1 C A - Both INDEL 0005.scaffold00021 12230 1 A . scaffold2135 Both SNP 0005.scaffold00021 12245 1 C A scaffold2135 Both SNP 0005.scaffold00021 12345 1 T A scaffold2135 Both SNP 0005.scaffold00021 12396 1 A C scaffold2135 ScafM SNP 0005.scaffold00021 12754 1 C T scaffold2135 ReadM SNP 0005.scaffold00021 12967 1 T C - ReadM SNP 0005.scaffold00021 13586 1 G T - ScafM SNP 0005.scaffold00021 14440 1 C T scaffold2135 ReadM SNP 0005.scaffold00021 14912 1 G A - ReadM SNP 0005.scaffold00021 15435 1 A G - ReadM SNP 0005.scaffold00021 15840 1 T C - ReadM SNP 0005.scaffold00021 15914 1 T C - ReadM SNP 0005.scaffold00021 16328 1 G A - ReadM SNP 0005.scaffold00021 16337 1 C T - ReadM INDEL 0005.scaffold00021 16604 1 T . - ReadM INDEL 0005.scaffold00021 16774 1 G . - ReadM SNP 0005.scaffold00021 17011 1 C T - ReadM SNP 0005.scaffold00021 17327 1 G A - ScafM SNP 0005.scaffold00021 17625 1 A C scaffold2135 ScafM SNP 0005.scaffold00021 17662 1 G C scaffold2135 ScafM SNP 0005.scaffold00021 17686 2 TT GC scaffold2135 ScafM SNP 0005.scaffold00021 17943 1 C T scaffold2135 ScafM SNP 0005.scaffold00021 18017 1 T A scaffold2135 ScafM SNP 0005.scaffold00021 18205 1 T C scaffold2135 Both SNP 0005.scaffold00021 18344 1 C T scaffold2135 Both SNP 0005.scaffold00021 18402 1 A T scaffold2135 Both SNP 0005.scaffold00021 18808 1 C T scaffold2135 Both SNP 0005.scaffold00021 19033 1 G A scaffold2135 Both INDEL 0005.scaffold00021 19161 2 AG .. scaffold2135 Both SNP 0005.scaffold00021 19185 1 T A scaffold2135 Both SNP 0005.scaffold00021 19570 1 T C scaffold2135 Both SNP 0005.scaffold00021 19645 1 G A scaffold2135 Both SNP 0005.scaffold00021 19706 1 C A scaffold2135 ScafM SNP 0005.scaffold00021 19877 1 G C scaffold2135 Both SNP 0005.scaffold00021 19887 1 G C scaffold2135 Both SNP 0005.scaffold00021 19943 1 G T scaffold2135 Both SNP 0005.scaffold00021 20272 1 T C scaffold2135 Both INDEL 0005.scaffold00021 20431 1 C . scaffold2135 Both SNP 0005.scaffold00021 20501 1 A T scaffold2135 ScafM SNP 0005.scaffold00021 20653 1 G A scaffold2135 ScafM SNP 0005.scaffold00021 20663 1 C T scaffold2135 ScafM INDEL 0005.scaffold00021 20698 2 .. TA scaffold2135 ScafM SNP 0005.scaffold00021 20709 1 A C scaffold2135 ScafM SNP 0005.scaffold00021 20713 1 T C scaffold2135 ReadM SNP 0005.scaffold00021 20743 1 T C - ReadM SNP 0005.scaffold00021 20924 1 C T - ReadM SNP 0005.scaffold00021 20984 1 A C - Both SNP 0005.scaffold00021 21203 1 T C scaffold2135 Both SNP 0005.scaffold00021 21238 1 C T scaffold2135 Both SNP 0005.scaffold00021 21268 1 C T scaffold2135 Both SNP 0005.scaffold00021 21608 1 T A scaffold2135 Both SNP 0005.scaffold00021 21622 1 C T scaffold2135 ScafM SNP 0005.scaffold00021 21674 1 T G scaffold2135 ScafM SNP 0005.scaffold00021 21720 1 T C scaffold2135 ScafM SNP 0005.scaffold00021 21751 1 A G scaffold2135 ScafM INDEL 0005.scaffold00021 21762 1 . G scaffold2135 ReadM SNP 0005.scaffold00021 22463 1 T C - ReadM SNP 0005.scaffold00021 22476 1 C A - ReadM SNP 0005.scaffold00021 22591 1 C T - ReadM SNP 0005.scaffold00021 22617 1 G T - ReadM SNP 0005.scaffold00021 22748 1 G T - ReadM SNP 0005.scaffold00021 22937 1 A G - ScafM INDEL 0005.scaffold00021 23482 20 TTCTCCCTTCTCTCTCACCC .................... scaffold2135 Both SNP 0005.scaffold00021 23578 1 A G scaffold2135 Both SNP 0005.scaffold00021 23683 1 C A scaffold2135 Both SNP 0005.scaffold00021 23732 1 A G scaffold2135 Both INDEL 0005.scaffold00021 23755 1 . T scaffold2135 Both SNP 0005.scaffold00021 23849 2 TG CA scaffold2135 Both SNP 0005.scaffold00021 23902 1 G C scaffold2135 Both SNP 0005.scaffold00021 23972 1 A G scaffold2135 ScafM INDEL 0005.scaffold00021 24056 9 ......... ACCAACAAC scaffold2135 Both SNP 0005.scaffold00021 24085 1 G C scaffold2135 Both SNP 0005.scaffold00021 24115 1 T C scaffold2135 Both INDEL 0005.scaffold00021 24152 1 T . scaffold2135 ScafM SNP 0005.scaffold00021 24199 1 G C scaffold2135 ScafM INDEL 0005.scaffold00021 24202 4 .... TTTT scaffold2135 ScafM SNP 0005.scaffold00021 24261 1 T C scaffold2135 ScafM SNP 0005.scaffold00021 24265 1 T G scaffold2135 ReadM INDEL 0005.scaffold00021 24342 1 T . - ReadM SNP 0005.scaffold00021 24625 1 T C - ReadM SNP 0005.scaffold00021 24736 1 G A - ReadM INDEL 0005.scaffold00021 24811 1 . G - ReadM SNP 0005.scaffold00021 25036 1 T C - ReadM SNP 0005.scaffold00021 25252 1 C A - ReadM SNP 0005.scaffold00021 25272 1 G A - ReadM SNP 0005.scaffold00021 25300 1 A C - ReadM SNP 0005.scaffold00021 25353 1 G A - ReadM SNP 0005.scaffold00021 25418 1 A G - ReadM SNP 0005.scaffold00021 25452 1 T C - ReadM SNP 0005.scaffold00021 25491 1 G A - Both SNP 0005.scaffold00021 26421 1 C T scaffold2960 Both SNP 0005.scaffold00021 26469 1 T C scaffold2960 ReadM SNP 0005.scaffold00021 26539 1 T G - ReadM SNP 0005.scaffold00021 27787 1 A G - ReadM SNP 0005.scaffold00021 28300 1 G A - ReadM SNP 0005.scaffold00021 28310 1 T A - Both SNP 0005.scaffold00021 28528 1 T C scaffold2960 ReadM SNP 0005.scaffold00021 28853 1 C T - ReadM SNP 0005.scaffold00021 28920 1 T C - ReadM SNP 0005.scaffold00021 29083 1 T C - Both SNP 0005.scaffold00021 29606 1 C T scaffold2960 Both SNP 0005.scaffold00021 29733 1 A G scaffold2960 ReadM SNP 0005.scaffold00021 29822 1 G T - ReadM SNP 0005.scaffold00021 29828 1 G A - ReadM INDEL 0005.scaffold00021 29837 1 A . - ReadM SNP 0005.scaffold00021 30040 1 T C - ReadM SNP 0005.scaffold00021 30108 1 C G - ReadM SNP 0005.scaffold00021 30164 1 A G - ReadM SNP 0005.scaffold00021 30232 1 G A - ReadM SNP 0005.scaffold00021 30375 1 G C - ReadM SNP 0005.scaffold00021 30445 1 T G - ReadM SNP 0005.scaffold00021 30483 1 C T - ReadM SNP 0005.scaffold00021 30587 1 C A - ReadM SNP 0005.scaffold00021 30776 1 G A - Both INDEL 0005.scaffold00021 30860 1 . C scaffold2960 ReadM SNP 0005.scaffold00021 31120 1 G A - ReadM SNP 0005.scaffold00021 31182 1 A G - ReadM SNP 0005.scaffold00021 31393 1 G A - ReadM SNP 0005.scaffold00021 31522 1 C T - ReadM SNP 0005.scaffold00021 31532 1 T C - ReadM SNP 0005.scaffold00021 31545 1 T C - ReadM SNP 0005.scaffold00021 31617 1 T C - ReadM SNP 0005.scaffold00021 31922 1 T C - ReadM SNP 0005.scaffold00021 32025 1 C T - ReadM SNP 0005.scaffold00021 32042 1 A C - ReadM SNP 0005.scaffold00021 32115 1 C T - ReadM SNP 0005.scaffold00021 32170 1 G A - ReadM SNP 0005.scaffold00021 32331 1 A G - ReadM SNP 0005.scaffold00021 32512 1 T C - ReadM SNP 0005.scaffold00021 32567 1 G A - ReadM SNP 0005.scaffold00021 32589 1 A G - ReadM SNP 0005.scaffold00021 32766 1 A G - ReadM SNP 0005.scaffold00021 32834 1 A G - ReadM SNP 0005.scaffold00021 32945 1 T C - ReadM SNP 0005.scaffold00021 32983 1 C T - ReadM SNP 0005.scaffold00021 33048 1 C T - ReadM SNP 0005.scaffold00021 33257 1 C T - ScafM SNP 0005.scaffold00021 33444 1 T C scaffold2960 ScafM INDEL 0005.scaffold00021 33642 3 ... TTT scaffold2960 ScafM SNP 0005.scaffold00021 33644 1 A T scaffold2960 ScafM SNP 0005.scaffold00021 34598 1 A C scaffold2960 ScafM SNP 0005.scaffold00021 34634 1 C T scaffold2960 ScafM SNP 0005.scaffold00021 34642 1 G T scaffold2960 Both SNP 0005.scaffold00021 34714 1 G C scaffold2960 ReadM SNP 0005.scaffold00021 34878 1 A G - ReadM INDEL 0005.scaffold00021 34881 1 . C - ReadM SNP 0005.scaffold00021 35799 1 C A - ReadM INDEL 0005.scaffold00021 35899 1 . A - ReadM SNP 0005.scaffold00021 36126 1 C T - ReadM SNP 0005.scaffold00021 36323 1 C T - ReadM SNP 0005.scaffold00021 36451 1 T A - ReadM INDEL 0005.scaffold00021 36473 1 . C - ReadM SNP 0005.scaffold00021 37205 1 G A - ReadM SNP 0005.scaffold00021 37222 1 A C - ReadM SNP 0005.scaffold00021 37320 1 T A - ReadM SNP 0005.scaffold00021 37339 1 T C - ReadM SNP 0005.scaffold00021 37425 1 T G - ReadM SNP 0005.scaffold00021 37434 1 A G - ReadM SNP 0005.scaffold00021 37509 1 G T - ReadM SNP 0005.scaffold00021 37558 1 A C - ReadM SNP 0005.scaffold00021 37656 1 C A - ReadM INDEL 0005.scaffold00021 37721 1 T . - ReadM SNP 0005.scaffold00021 37756 1 G A - ReadM SNP 0005.scaffold00021 37967 1 G A - ReadM SNP 0005.scaffold00021 38202 1 C G - Both SNP 0005.scaffold00021 38270 1 T C scaffold2960 ScafM SNP 0005.scaffold00021 38343 1 G A scaffold2960 ScafM SNP 0005.scaffold00021 38410 1 C T scaffold2960 ReadM SNP 0005.scaffold00021 38460 1 A G - ReadM SNP 0005.scaffold00021 38596 1 G C - ReadM SNP 0005.scaffold00021 38624 1 T C - ReadM SNP 0005.scaffold00021 38689 1 G A - ReadM SNP 0005.scaffold00021 38832 1 A C - ReadM SNP 0005.scaffold00021 39019 1 C T - ReadM SNP 0005.scaffold00021 39035 1 C T - ReadM SNP 0005.scaffold00021 39044 1 A G - ReadM SNP 0005.scaffold00021 39233 1 C A - ReadM SNP 0005.scaffold00021 39240 1 G A - Both SNP 0005.scaffold00021 39602 1 C T scaffold2960 ReadM SNP 0005.scaffold00021 39734 1 C T - ReadM SNP 0005.scaffold00021 39924 1 C T - Both SNP 0005.scaffold00021 40011 1 C T scaffold2960 ReadM SNP 0005.scaffold00021 40126 1 G A - ReadM SNP 0005.scaffold00021 40300 1 G A - ReadM SNP 0005.scaffold00021 40302 1 C T - ReadM SNP 0005.scaffold00021 40431 1 A T - ReadM SNP 0005.scaffold00021 40613 1 T C - ReadM SNP 0005.scaffold00021 40738 1 G A - ReadM SNP 0005.scaffold00021 40877 1 A G - ReadM SNP 0005.scaffold00021 41094 1 A T - ReadM INDEL 0005.scaffold00021 41228 1 . G - ReadM SNP 0005.scaffold00021 42590 1 G A - ReadM SNP 0005.scaffold00021 42623 1 C A - ReadM SNP 0005.scaffold00021 42684 1 G A - ReadM SNP 0005.scaffold00021 42695 1 T C - ReadM SNP 0005.scaffold00021 43045 1 C T - ReadM SNP 0005.scaffold00021 43153 1 T C - ReadM SNP 0005.scaffold00021 43583 1 C T - ReadM SNP 0005.scaffold00021 43588 1 A G - ReadM SNP 0005.scaffold00021 43625 1 A G - ReadM SNP 0005.scaffold00021 43993 1 G A - ReadM SNP 0005.scaffold00021 43996 1 G A - ReadM SNP 0005.scaffold00021 44188 1 T C - ReadM SNP 0005.scaffold00021 44207 1 C A - ReadM SNP 0005.scaffold00021 44516 1 G C - ReadM SNP 0005.scaffold00021 44637 1 G A - ReadM SNP 0005.scaffold00021 44773 1 G A - ReadM SNP 0005.scaffold00021 44790 1 G A - ReadM SNP 0005.scaffold00021 44922 1 G T - ReadM SNP 0005.scaffold00021 44965 1 T C - ReadM SNP 0005.scaffold00021 45496 1 G T - ReadM SNP 0005.scaffold00021 45503 1 T G - Both SNP 0005.scaffold00021 45583 1 T C scaffold2960 ReadM SNP 0005.scaffold00021 45633 1 G T - ReadM SNP 0005.scaffold00021 45681 1 A G - ReadM SNP 0005.scaffold00021 45737 1 T C - ReadM SNP 0005.scaffold00021 45794 1 T C - ReadM SNP 0005.scaffold00021 45827 1 A C - ReadM SNP 0005.scaffold00021 45933 1 A T - ReadM SNP 0005.scaffold00021 45946 1 A G - ReadM SNP 0005.scaffold00021 46127 1 C T - ReadM SNP 0005.scaffold00021 46192 1 T G - ReadM SNP 0005.scaffold00021 46201 1 T C - ReadM SNP 0005.scaffold00021 46212 1 C T - ReadM SNP 0005.scaffold00021 46246 1 G A - ReadM SNP 0005.scaffold00021 46394 1 A T - ReadM SNP 0005.scaffold00021 46411 1 G A - ReadM SNP 0005.scaffold00021 46507 1 T C - ReadM SNP 0005.scaffold00021 46628 1 A T - ReadM SNP 0005.scaffold00021 46632 1 C T - ReadM SNP 0005.scaffold00021 46665 1 C T - ReadM SNP 0005.scaffold00021 46745 1 T A - ReadM SNP 0005.scaffold00021 46749 1 G A - ReadM SNP 0005.scaffold00021 46866 1 A C - ReadM SNP 0005.scaffold00021 47119 1 C T - ReadM SNP 0005.scaffold00021 47184 1 C T - ReadM SNP 0005.scaffold00021 47225 1 T A - ReadM SNP 0005.scaffold00021 47263 1 A T - ReadM SNP 0005.scaffold00021 47506 1 G C - ReadM SNP 0005.scaffold00021 47663 1 A C - ReadM SNP 0005.scaffold00021 47902 1 C T - ReadM SNP 0005.scaffold00021 47924 1 T A - ReadM SNP 0005.scaffold00021 48310 1 T C - ReadM SNP 0005.scaffold00021 48315 1 G C - ReadM SNP 0005.scaffold00021 48437 1 C A - ReadM SNP 0005.scaffold00021 48579 1 T G - ReadM SNP 0005.scaffold00021 48615 1 G T - ReadM SNP 0005.scaffold00021 48621 1 C T - ReadM SNP 0005.scaffold00021 49016 1 C G - ReadM SNP 0005.scaffold00021 49173 1 G T - ReadM SNP 0005.scaffold00021 49258 1 G C - ReadM SNP 0005.scaffold00021 49279 1 T A - ReadM SNP 0005.scaffold00021 49512 1 C G - ReadM SNP 0005.scaffold00021 49538 1 A C - ReadM SNP 0005.scaffold00021 49568 1 A C - ReadM SNP 0005.scaffold00021 49638 1 A G - ReadM SNP 0005.scaffold00021 49724 1 C G - ScafM INDEL 0005.scaffold00021 49991 4 .... GACA scaffold2960 ScafM SNP 0005.scaffold00021 50005 1 A G scaffold2960 Both SNP 0005.scaffold00021 50214 1 A G scaffold2960 ReadM SNP 0005.scaffold00021 50261 1 C A - ReadM SNP 0005.scaffold00021 50302 1 T A - Both SNP 0005.scaffold00021 50529 1 T C scaffold2960 Both SNP 0005.scaffold00021 50542 1 T C scaffold2960 Both SNP 0005.scaffold00021 50686 1 A G scaffold2960 Both SNP 0005.scaffold00021 50742 1 C T scaffold2960 ScafM SNP 0005.scaffold00021 50818 1 C T scaffold2960 ScafM INDEL 0005.scaffold00021 50845 4 AGGA .... scaffold2960 ScafM SNP 0005.scaffold00021 50859 1 A T scaffold2960 ReadM SNP 0005.scaffold00021 51074 1 T A - ReadM SNP 0005.scaffold00021 51217 1 T G - ReadM INDEL 0005.scaffold00021 51341 2 TG .. - ScafM SNP 0005.scaffold00021 51869 1 G A scaffold41169 ScafM SNP 0005.scaffold00021 51875 1 G A scaffold41169 ScafM SNP 0005.scaffold00021 53711 1 A G scaffold41169 ScafM INDEL 0005.scaffold00021 53850 24 ........................ TTTCTCAGATCTAATAATACGACC scaffold41169 ScafM SNP 0005.scaffold00021 54093 1 C A scaffold41169 Both SNP 0005.scaffold00021 54225 1 T G scaffold41169 Both SNP 0005.scaffold00021 54269 1 T C scaffold41169 Both SNP 0005.scaffold00021 54334 1 T G scaffold41169 ReadM SNP 0005.scaffold00021 54822 1 G T - ReadM SNP 0005.scaffold00021 54847 1 T C - ReadM SNP 0005.scaffold00021 54938 1 G A - ReadM SNP 0005.scaffold00021 55382 1 T A - ReadM SNP 0005.scaffold00021 55552 1 C T - ReadM SNP 0005.scaffold00021 55872 1 C G - ReadM SNP 0005.scaffold00021 55936 1 G T - ReadM SNP 0005.scaffold00021 55942 1 A T - ReadM SNP 0005.scaffold00021 56576 1 G A - ReadM SNP 0005.scaffold00021 56823 1 T C - ReadM SNP 0005.scaffold00021 56878 1 T C - ReadM SNP 0005.scaffold00021 57130 1 G T - ReadM SNP 0005.scaffold00021 57599 1 G A - ReadM SNP 0005.scaffold00021 57613 1 A C - ReadM SNP 0005.scaffold00021 57958 1 C T - ReadM SNP 0005.scaffold00021 57965 1 T C - ReadM SNP 0005.scaffold00021 58075 1 C T - ReadM SNP 0005.scaffold00021 58487 1 A G - ReadM SNP 0005.scaffold00021 58814 1 T C - ReadM SNP 0005.scaffold00021 58901 1 A T - ReadM SNP 0005.scaffold00021 59378 1 T C - ReadM SNP 0005.scaffold00021 59522 1 A G - ScafM INDEL 0005.scaffold00021 59664 2 .. TC scaffold23137 ScafM SNP 0005.scaffold00021 59734 1 T C scaffold23137 ScafM INDEL 0005.scaffold00021 59820 5 ACAGA ..... scaffold23137 ScafM INDEL 0005.scaffold00021 59827 1 A . scaffold23137 ScafM INDEL 0005.scaffold00021 59830 7 CTACTCA ....... scaffold23137 ReadM SNP 0005.scaffold00021 59837 1 A G - ScafM INDEL 0005.scaffold00021 59843 5 ATAGA ..... scaffold23137 ScafM INDEL 0005.scaffold00021 59852 2 AA .. scaffold23137 ScafM INDEL 0005.scaffold00021 59858 1 A . scaffold23137 ScafM INDEL 0005.scaffold00021 59863 3 TTC ... scaffold23137 ScafM INDEL 0005.scaffold00021 59868 2 AC .. scaffold23137 ScafM INDEL 0005.scaffold00021 59872 2 AG .C scaffold23137 ScafM INDEL 0005.scaffold00021 59923 8 ........ TTCTTTGA scaffold23137 ReadM SNP 0005.scaffold00021 59929 1 C A - ScafM SNP 0005.scaffold00021 59983 1 C T scaffold23137 ReadM SNP 0005.scaffold00021 60138 1 T C - ReadM SNP 0005.scaffold00021 61430 1 T C - ReadM SNP 0005.scaffold00021 67191 1 T C - ReadM SNP 0005.scaffold00021 67372 1 A C - ReadM SNP 0005.scaffold00021 67380 1 T C - ReadM SNP 0005.scaffold00021 67534 1 C A - ReadM SNP 0005.scaffold00021 67576 1 A C - ReadM SNP 0005.scaffold00021 67675 1 G C - ReadM SNP 0005.scaffold00021 68382 1 G A - ReadM SNP 0005.scaffold00021 68431 1 G A - ReadM SNP 0005.scaffold00021 68494 1 A G - ReadM SNP 0005.scaffold00021 68621 1 C T - ReadM SNP 0005.scaffold00021 68750 1 T A - ReadM SNP 0005.scaffold00021 68913 1 C G - ReadM SNP 0005.scaffold00021 69306 1 A G - ReadM SNP 0005.scaffold00021 69441 1 G A - ReadM SNP 0005.scaffold00021 69987 1 A G - ReadM SNP 0005.scaffold00021 70141 1 T G - ReadM SNP 0005.scaffold00021 70519 1 A G - ReadM INDEL 0005.scaffold00021 71558 1 C . - ReadM SNP 0005.scaffold00021 72186 1 T C - ReadM SNP 0005.scaffold00021 72312 1 C G - ReadM SNP 0005.scaffold00021 72437 1 C A - ReadM SNP 0005.scaffold00021 72716 1 A G - ReadM SNP 0005.scaffold00021 72831 2 GA TT - ReadM SNP 0005.scaffold00021 72931 1 A G - ReadM SNP 0005.scaffold00021 73050 1 A G - ReadM SNP 0005.scaffold00021 73537 1 C T - ReadM SNP 0005.scaffold00021 73642 1 T C - Both SNP 0005.scaffold00021 73798 1 A G scaffold36682 ScafM SNP 0005.scaffold00021 74042 1 T C scaffold36682 ScafM INDEL 0005.scaffold00021 75107 12 ............ TCGTATTGCATA scaffold36682 ReadM SNP 0005.scaffold00021 75513 1 C A - ReadM SNP 0005.scaffold00021 75929 1 G A - ReadM SNP 0005.scaffold00021 75956 1 A G - ReadM SNP 0005.scaffold00021 75991 1 G T - ReadM SNP 0005.scaffold00021 76326 1 G T - ReadM SNP 0005.scaffold00021 77419 1 C T - Both SNP 0005.scaffold00021 77533 1 T C scaffold204 ScafM SNP 0005.scaffold00021 77779 1 C T scaffold204 ScafM SNP 0005.scaffold00021 77796 1 T G scaffold204 ScafM SNP 0005.scaffold00021 77910 1 C T scaffold204 ScafM SNP 0005.scaffold00021 77918 1 G T scaffold204 ScafM SNP 0005.scaffold00021 77925 2 GC AT scaffold204 Both SNP 0005.scaffold00021 78146 1 T A scaffold204 Both SNP 0005.scaffold00021 78287 1 A G scaffold204 Both SNP 0005.scaffold00021 78291 1 G T scaffold204 Both SNP 0005.scaffold00021 78467 1 G C scaffold204 ScafM SNP 0005.scaffold00021 78708 1 A C scaffold204 Both SNP 0005.scaffold00021 78729 1 C T scaffold204 Both SNP 0005.scaffold00021 78773 1 G A scaffold204 ScafM SNP 0005.scaffold00021 79043 1 G A scaffold204 ScafM SNP 0005.scaffold00021 79112 1 G A scaffold204 Both SNP 0005.scaffold00021 79169 1 C T scaffold204 Both SNP 0005.scaffold00021 79210 1 G A scaffold204 ScafM INDEL 0005.scaffold00021 79484 1 A . scaffold204 ScafM SNP 0005.scaffold00021 79601 1 G A scaffold204 ScafM SNP 0005.scaffold00021 79635 1 G A scaffold204 Both SNP 0005.scaffold00021 79866 1 A T scaffold204 Both SNP 0005.scaffold00021 80005 1 G T scaffold204 Both SNP 0005.scaffold00021 80056 1 A G scaffold204 Both SNP 0005.scaffold00021 80255 1 A G scaffold204 Both SNP 0005.scaffold00021 80340 1 A G scaffold204 Both SNP 0005.scaffold00021 80896 1 C T scaffold204 Both SNP 0005.scaffold00021 81008 1 G C scaffold204 Both SNP 0005.scaffold00021 81013 1 G A scaffold204 Both SNP 0005.scaffold00021 81052 1 T G scaffold204 ScafM INDEL 0005.scaffold00021 81375 8 TCTGGTAC ........ scaffold204 Both SNP 0005.scaffold00021 81411 1 C T scaffold204 Both SNP 0005.scaffold00021 81709 1 A G scaffold204 Both SNP 0005.scaffold00021 81763 1 C A scaffold204 Both INDEL 0005.scaffold00021 81964 1 . A scaffold204 Both SNP 0005.scaffold00021 82014 1 G C scaffold204 ScafM SNP 0005.scaffold00021 82886 2 AT GA scaffold204 Both SNP 0005.scaffold00021 83110 1 T G scaffold204 Both SNP 0005.scaffold00021 83167 1 G A scaffold204 Both SNP 0005.scaffold00021 83284 1 G C scaffold204 Both SNP 0005.scaffold00021 83510 1 G C scaffold204 Both SNP 0005.scaffold00021 83519 2 TC GG scaffold204 Both INDEL 0005.scaffold00021 83626 1 G . scaffold204 ScafM SNP 0005.scaffold00021 83634 1 A C scaffold204 ScafM SNP 0005.scaffold00021 83713 1 C G scaffold204 ScafM SNP 0005.scaffold00021 83784 1 G A scaffold204 ScafM INDEL 0005.scaffold00021 83825 1 T . scaffold204 ScafM SNP 0005.scaffold00021 83854 2 GG AT scaffold204 Both SNP 0005.scaffold00021 83912 1 C T scaffold204 Both INDEL 0005.scaffold00021 83988 1 . G scaffold204 Both SNP 0005.scaffold00021 84102 1 C A scaffold204 ReadM SNP 0005.scaffold00021 84248 1 T G - Both SNP 0005.scaffold00021 84330 1 C G scaffold204 Both SNP 0005.scaffold00021 84367 1 T G scaffold204 ReadM SNP 0005.scaffold00021 84535 1 A G - ReadM SNP 0005.scaffold00021 84568 1 C T - ReadM SNP 0005.scaffold00021 84647 1 C T - ReadM SNP 0005.scaffold00021 84721 1 A G - ReadM SNP 0005.scaffold00021 84833 1 C A - ReadM SNP 0005.scaffold00021 85164 1 T C - Both SNP 0005.scaffold00021 85324 1 G A scaffold204 Both SNP 0005.scaffold00021 85397 1 C A scaffold204 ReadM SNP 0005.scaffold00021 85451 1 C T - ReadM SNP 0005.scaffold00021 85528 1 G A - Both SNP 0005.scaffold00021 85568 1 C G scaffold204 Both SNP 0005.scaffold00021 85599 1 A T scaffold204 Both SNP 0005.scaffold00021 85622 1 A T scaffold204 ScafM SNP 0005.scaffold00021 85678 1 A G scaffold204 ScafM INDEL 0005.scaffold00021 85688 3 CCC ... scaffold204 ScafM INDEL 0005.scaffold00021 85704 1 C . scaffold204 Both SNP 0005.scaffold00021 85817 1 T C scaffold204 Both SNP 0005.scaffold00021 85937 1 A G scaffold204 Both SNP 0005.scaffold00021 86157 1 A T scaffold204 Both SNP 0005.scaffold00021 86213 1 C T scaffold204 Both SNP 0005.scaffold00021 86235 1 T C scaffold204 ReadM SNP 0005.scaffold00021 86358 1 A G - Both SNP 0005.scaffold00021 86445 1 G A scaffold204 Both SNP 0005.scaffold00021 86451 1 A G scaffold204 Both SNP 0005.scaffold00021 86464 1 G C scaffold204 Both SNP 0005.scaffold00021 86530 1 A G scaffold204 Both INDEL 0005.scaffold00021 86533 1 T . scaffold204 ScafM SNP 0005.scaffold00021 86611 1 C G scaffold204 Both SNP 0005.scaffold00021 86645 1 T C scaffold204 Both SNP 0005.scaffold00021 86684 1 A G scaffold204 Both SNP 0005.scaffold00021 86783 1 C A scaffold204 Both SNP 0005.scaffold00021 86797 1 T C scaffold204 Both SNP 0005.scaffold00021 86812 1 G A scaffold204 Both SNP 0005.scaffold00021 87141 1 G A scaffold204 ScafM SNP 0005.scaffold00021 87156 1 A T scaffold204 ScafM SNP 0005.scaffold00021 87158 1 G A scaffold204 Both SNP 0005.scaffold00021 87194 1 G C scaffold204 Both SNP 0005.scaffold00021 87295 1 C A scaffold204 Both INDEL 0005.scaffold00021 87389 1 . G scaffold204 ScafM SNP 0005.scaffold00021 87392 1 A T scaffold204 Both SNP 0005.scaffold00021 87515 1 T A scaffold204 Both SNP 0005.scaffold00021 87654 1 T C scaffold204 Both SNP 0005.scaffold00021 87710 1 C T scaffold204 Both SNP 0005.scaffold00021 87749 1 G C scaffold204 Both SNP 0005.scaffold00021 87825 1 A G scaffold204 Both SNP 0005.scaffold00021 87863 1 T C scaffold204 Both SNP 0005.scaffold00021 87920 1 C T scaffold204 Both SNP 0005.scaffold00021 87945 1 A G scaffold204 Both SNP 0005.scaffold00021 88046 1 C A scaffold204 ScafM INDEL 0005.scaffold00021 88069 46 .............................................. TCCCGTGGTGTCCAGCATCGTCAACCTACTCGATTGTTGTGTGACA scaffold204 Both SNP 0005.scaffold00021 88114 1 A C scaffold204 Both SNP 0005.scaffold00021 88147 1 A G scaffold204 Both SNP 0005.scaffold00021 88164 1 G A scaffold204 Both SNP 0005.scaffold00021 88361 1 G A scaffold204 ReadM SNP 0005.scaffold00021 88611 1 A G - Both SNP 0005.scaffold00021 89081 1 A T scaffold204 Both SNP 0005.scaffold00021 89111 1 A C scaffold204 ScafM SNP 0005.scaffold00021 89170 1 T C scaffold204 ScafM SNP 0005.scaffold00021 89272 1 T G scaffold204 ScafM SNP 0005.scaffold00021 89275 1 G T scaffold204 ScafM SNP 0005.scaffold00021 89471 1 A C scaffold204 ScafM SNP 0005.scaffold00021 89600 1 G A scaffold204 ScafM SNP 0005.scaffold00021 89633 1 A T scaffold204 ScafM SNP 0005.scaffold00021 89641 1 C T scaffold204 ScafM SNP 0005.scaffold00021 89794 1 G A scaffold204 ScafM SNP 0005.scaffold00021 90025 2 AG GT scaffold204 Both SNP 0005.scaffold00021 90102 1 C T scaffold204 Both SNP 0005.scaffold00021 90121 1 T C scaffold204 Both SNP 0005.scaffold00021 90159 1 C T scaffold204 Both SNP 0005.scaffold00021 90162 1 C G scaffold204 Both SNP 0005.scaffold00021 90375 1 T A scaffold204 Both SNP 0005.scaffold00021 90393 1 A G scaffold204 Both SNP 0005.scaffold00021 90404 1 T C scaffold204 Both SNP 0005.scaffold00021 90445 1 C T scaffold204 Both SNP 0005.scaffold00021 90582 1 A G scaffold204 Both SNP 0005.scaffold00021 90719 1 C G scaffold204 ScafM SNP 0005.scaffold00021 90771 2 TT AA scaffold204 ScafM SNP 0005.scaffold00021 90806 1 A T scaffold204 Both INDEL 0005.scaffold00021 90840 1 G . scaffold204 Both SNP 0005.scaffold00021 90903 1 T C scaffold204 ScafM INDEL 0005.scaffold00021 90985 1 . A scaffold204 ScafM SNP 0005.scaffold00021 90987 1 G A scaffold204 ScafM INDEL 0005.scaffold00021 90997 1 . A scaffold204 Both SNP 0005.scaffold00021 91184 1 G A scaffold204 Both SNP 0005.scaffold00021 91302 1 G A scaffold204 ReadM SNP 0005.scaffold00021 91480 1 C A - ReadM SNP 0005.scaffold00021 91646 1 A T - Both SNP 0005.scaffold00021 91771 1 A G scaffold204 Both SNP 0005.scaffold00021 91892 1 A G scaffold204 Both SNP 0005.scaffold00021 92014 1 A G scaffold204 Both SNP 0005.scaffold00021 92047 1 A G scaffold204 Both SNP 0005.scaffold00021 92124 1 C T scaffold204 ReadM SNP 0005.scaffold00021 92200 1 A G - ReadM SNP 0005.scaffold00021 92375 1 T C - ReadM SNP 0005.scaffold00021 92379 1 A G - ReadM SNP 0005.scaffold00021 92440 1 G A - ReadM SNP 0005.scaffold00021 92481 1 T C - ReadM SNP 0005.scaffold00021 92486 1 G C - ReadM SNP 0005.scaffold00021 92601 1 A C - ReadM INDEL 0005.scaffold00021 92643 1 G . - ReadM SNP 0005.scaffold00021 92816 1 A C - ReadM SNP 0005.scaffold00021 92821 1 T C - ReadM SNP 0005.scaffold00021 92846 1 C G - ReadM SNP 0005.scaffold00021 92919 1 C G - Both SNP 0005.scaffold00021 93062 1 G A scaffold204 Both SNP 0005.scaffold00021 93093 1 G A scaffold204 Both SNP 0005.scaffold00021 93142 1 A G scaffold204 ReadM SNP 0005.scaffold00021 93238 1 T G - ReadM SNP 0005.scaffold00021 93244 1 G A - ReadM SNP 0005.scaffold00021 93270 1 C A - ReadM SNP 0005.scaffold00021 93351 1 G T - ReadM SNP 0005.scaffold00021 93488 1 T C - ReadM SNP 0005.scaffold00021 93542 1 G A - ReadM SNP 0005.scaffold00021 93810 1 T G - ReadM SNP 0005.scaffold00021 93823 1 T G - Both SNP 0005.scaffold00021 93929 1 C T scaffold204 Both SNP 0005.scaffold00021 93975 1 A T scaffold204 ScafM SNP 0005.scaffold00021 94256 1 G C scaffold204 Both SNP 0005.scaffold00021 94272 1 T G scaffold204 Both SNP 0005.scaffold00021 94486 1 A C scaffold204 ScafM SNP 0005.scaffold00021 94502 1 G A scaffold204 Both SNP 0005.scaffold00021 94681 1 G A scaffold204 Both SNP 0005.scaffold00021 94723 1 C T scaffold204 ReadM SNP 0005.scaffold00021 95072 1 C T - ReadM SNP 0005.scaffold00021 95458 1 A C - ReadM SNP 0005.scaffold00021 95522 1 G A - Both SNP 0005.scaffold00021 95636 1 G A scaffold204 Both SNP 0005.scaffold00021 95809 1 T A scaffold204 ReadM SNP 0005.scaffold00021 95941 1 A C - ReadM SNP 0005.scaffold00021 95974 1 A T - ScafM INDEL 0005.scaffold00021 96258 2 GT .. scaffold204 ScafM SNP 0005.scaffold00021 96324 1 G A scaffold204 ScafM INDEL 0005.scaffold00021 96326 1 . A scaffold204 ScafM SNP 0005.scaffold00021 96336 1 T A scaffold204 Both SNP 0005.scaffold00021 96495 1 C T scaffold204 Both SNP 0005.scaffold00021 96526 1 T A scaffold204 ReadM SNP 0005.scaffold00021 96801 1 C A - Both SNP 0005.scaffold00021 96846 1 T C scaffold204 Both SNP 0005.scaffold00021 97059 1 C T scaffold204 Both SNP 0005.scaffold00021 97086 1 A T scaffold204 Both SNP 0005.scaffold00021 97169 1 A G scaffold204 Both SNP 0005.scaffold00021 97175 1 C T scaffold204 Both SNP 0005.scaffold00021 97183 1 C G scaffold204 Both SNP 0005.scaffold00021 97232 1 A T scaffold204 Both SNP 0005.scaffold00021 97416 1 G A scaffold204 Both SNP 0005.scaffold00021 97423 1 A G scaffold204 Both SNP 0005.scaffold00021 97742 1 T C scaffold204 Both SNP 0005.scaffold00021 97899 1 T A scaffold204 Both SNP 0005.scaffold00021 98096 1 T A scaffold204 Both SNP 0005.scaffold00021 98515 1 C T scaffold204 ScafM INDEL 0005.scaffold00021 98598 7 ....... ACTACAA scaffold204 Both SNP 0005.scaffold00021 98633 1 C T scaffold204 Both INDEL 0005.scaffold00021 98935 3 CTT ... scaffold204 ReadM SNP 0005.scaffold00021 99063 1 G A - ReadM SNP 0005.scaffold00021 99223 1 A G - ReadM INDEL 0005.scaffold00021 99397 1 T . - Both SNP 0005.scaffold00021 99549 1 G A scaffold204 Both SNP 0005.scaffold00021 99560 1 T G scaffold204 Both SNP 0005.scaffold00021 99845 1 G A scaffold204 ScafM SNP 0005.scaffold00021 100273 1 C T scaffold204 ScafM SNP 0005.scaffold00021 100310 1 T A scaffold204 ScafM INDEL 0005.scaffold00021 100378 3 ... TAA scaffold204 Both SNP 0005.scaffold00021 100542 1 A C scaffold204 Both SNP 0005.scaffold00021 100672 1 C T scaffold204 ScafM SNP 0005.scaffold00021 100840 1 T G scaffold204 ScafM SNP 0005.scaffold00021 100842 2 AT GG scaffold204 ScafM SNP 0005.scaffold00021 100859 1 C T scaffold204 ReadM SNP 0005.scaffold00021 100872 1 A G - ScafM SNP 0005.scaffold00021 100879 1 A G scaffold204 ScafM INDEL 0005.scaffold00021 100891 1 . T scaffold204 ScafM SNP 0005.scaffold00021 100910 1 C T scaffold204 Both SNP 0005.scaffold00021 100990 1 T C scaffold204 ScafM SNP 0005.scaffold00021 101014 2 AT TA scaffold204 Both SNP 0005.scaffold00021 101183 1 C A scaffold204 Both SNP 0005.scaffold00021 101269 1 A G scaffold204 Both SNP 0005.scaffold00021 101321 1 C T scaffold204 ScafM INDEL 0005.scaffold00021 101421 14 .............. TGCTGAAAATTTTT scaffold204 ScafM SNP 0005.scaffold00021 101436 1 C T scaffold204 Both SNP 0005.scaffold00021 101483 1 T G scaffold204 Both SNP 0005.scaffold00021 101600 1 G C scaffold204 Both SNP 0005.scaffold00021 102118 1 A G scaffold204 Both SNP 0005.scaffold00021 102211 1 C G scaffold204 Both SNP 0005.scaffold00021 102405 1 T C scaffold204 Both SNP 0005.scaffold00021 102447 1 T A scaffold204 ScafM SNP 0005.scaffold00021 102623 1 A T scaffold204 Both INDEL 0005.scaffold00021 102667 3 TTG ... scaffold204 Both SNP 0005.scaffold00021 102723 1 C G scaffold204 Both SNP 0005.scaffold00021 102728 1 A G scaffold204 ScafM SNP 0005.scaffold00021 102816 1 C T scaffold204 ReadM SNP 0005.scaffold00021 103013 1 A G - ReadM SNP 0005.scaffold00021 103060 1 A C - ScafM SNP 0005.scaffold00021 103193 1 T G scaffold204 ReadM SNP 0005.scaffold00021 103470 1 T C - ReadM SNP 0005.scaffold00021 103582 1 A G - ReadM SNP 0005.scaffold00021 103720 1 G A - ReadM SNP 0005.scaffold00021 103733 1 C T - ReadM SNP 0005.scaffold00021 103909 1 G A - Both SNP 0005.scaffold00021 103976 1 T C scaffold204 Both SNP 0005.scaffold00021 103982 1 A T scaffold204 Both SNP 0005.scaffold00021 103996 1 A C scaffold204 ReadM SNP 0005.scaffold00021 104146 1 A C - ReadM SNP 0005.scaffold00021 104303 1 T C - ReadM SNP 0005.scaffold00021 104427 1 G T - ReadM SNP 0005.scaffold00021 104435 1 T C - ReadM SNP 0005.scaffold00021 104484 1 C T - ReadM SNP 0005.scaffold00021 104532 1 T C - ReadM SNP 0005.scaffold00021 104573 1 C T - ReadM SNP 0005.scaffold00021 104652 1 A G - ReadM SNP 0005.scaffold00021 104718 1 T C - ReadM SNP 0005.scaffold00021 104839 1 C G - ReadM SNP 0005.scaffold00021 104970 1 G A - ReadM SNP 0005.scaffold00021 105145 1 T C - ReadM SNP 0005.scaffold00021 105334 1 C T - ReadM SNP 0005.scaffold00021 105449 1 T G - ReadM SNP 0005.scaffold00021 105474 1 C T - ReadM SNP 0005.scaffold00021 105559 1 A G - Both SNP 0005.scaffold00021 105658 1 A G scaffold8913 Both SNP 0005.scaffold00021 105661 1 T A scaffold8913 Both SNP 0005.scaffold00021 105664 1 T C scaffold8913 ReadM SNP 0005.scaffold00021 105805 1 C T - ReadM SNP 0005.scaffold00021 106185 1 T G - ReadM SNP 0005.scaffold00021 106275 1 G T - ReadM SNP 0005.scaffold00021 106547 1 A G - ReadM SNP 0005.scaffold00021 106606 1 T C - ReadM SNP 0005.scaffold00021 106671 1 G T - ReadM SNP 0005.scaffold00021 106721 1 T C - ReadM SNP 0005.scaffold00021 106727 1 G T - ReadM SNP 0005.scaffold00021 106891 1 T C - ReadM SNP 0005.scaffold00021 106936 1 T C - ReadM SNP 0005.scaffold00021 106957 1 A T - ReadM SNP 0005.scaffold00021 106984 1 T G - ReadM SNP 0005.scaffold00021 106988 1 A G - ReadM SNP 0005.scaffold00021 107005 1 T C - ReadM SNP 0005.scaffold00021 107259 1 G A - Both SNP 0005.scaffold00021 107431 1 G C scaffold8913 Both SNP 0005.scaffold00021 107524 1 C T scaffold8913 Both SNP 0005.scaffold00021 107606 1 A G scaffold8913 Both SNP 0005.scaffold00021 107939 1 G A scaffold8913 Both SNP 0005.scaffold00021 107955 1 C T scaffold8913 ReadM SNP 0005.scaffold00021 108194 1 G A - ReadM SNP 0005.scaffold00021 108233 1 G A - ReadM SNP 0005.scaffold00021 108406 1 A C - ReadM SNP 0005.scaffold00021 108433 1 A C - ReadM SNP 0005.scaffold00021 108473 1 C T - ReadM SNP 0005.scaffold00021 108524 1 C A - ReadM SNP 0005.scaffold00021 108876 1 T C - Both SNP 0005.scaffold00021 108944 1 A G scaffold8913 ScafM SNP 0005.scaffold00021 108951 1 A G scaffold8913 ScafM SNP 0005.scaffold00021 108972 1 G T scaffold8913 ScafM SNP 0005.scaffold00021 108988 1 G T scaffold8913 ScafM SNP 0005.scaffold00021 109064 1 G A scaffold8913 Both SNP 0005.scaffold00021 109249 1 T C scaffold8913 Both SNP 0005.scaffold00021 109299 1 G T scaffold8913 Both SNP 0005.scaffold00021 109481 1 T A scaffold8913 Both SNP 0005.scaffold00021 109559 1 A G scaffold8913 Both SNP 0005.scaffold00021 109792 1 C T scaffold8913 Both SNP 0005.scaffold00021 109978 1 A G scaffold8913 ScafM INDEL 0005.scaffold00021 110354 7 ....... ATAAAAT scaffold8913 ScafM INDEL 0005.scaffold00021 110423 5 ..... AATAA scaffold8913 Both SNP 0005.scaffold00021 110464 1 C A scaffold8913 ReadM SNP 0005.scaffold00021 110668 1 C T - Both SNP 0005.scaffold00021 110741 1 T C scaffold8913 Both SNP 0005.scaffold00021 110981 1 C T scaffold8913 Both SNP 0005.scaffold00021 111353 1 C A scaffold8913 Both SNP 0005.scaffold00021 111477 1 T C scaffold8913 Both SNP 0005.scaffold00021 111498 1 T C scaffold8913 Both SNP 0005.scaffold00021 111500 1 G A scaffold8913 Both SNP 0005.scaffold00021 111544 1 A G scaffold8913 Both SNP 0005.scaffold00021 111689 1 T G scaffold8913 ScafM SNP 0005.scaffold00021 111699 1 T C scaffold8913 ReadM SNP 0005.scaffold00021 111883 1 A T - ScafM SNP 0005.scaffold00021 111996 1 C A scaffold8913 ScafM SNP 0005.scaffold00021 112633 1 C T scaffold8913 Both INDEL 0005.scaffold00021 112980 1 . A scaffold8913 Both SNP 0005.scaffold00021 113168 1 T A scaffold8913 Both SNP 0005.scaffold00021 113330 1 A G scaffold8913 ScafM INDEL 0005.scaffold00021 113353 19 ................... AGATGGACAAAAAAGCAAA scaffold8913 Both INDEL 0005.scaffold00021 113514 1 . A scaffold8913 Both SNP 0005.scaffold00021 113566 1 A G scaffold8913 Both SNP 0005.scaffold00021 113621 1 C T scaffold8913 ScafM SNP 0005.scaffold00021 113690 2 TG CA scaffold8913 ReadM SNP 0005.scaffold00021 113691 1 G A - Both INDEL 0005.scaffold00021 113715 1 A . scaffold8913 Both SNP 0005.scaffold00021 113893 1 T G scaffold8913 Both SNP 0005.scaffold00021 114740 1 T C scaffold8913 Both SNP 0005.scaffold00021 114889 1 C T scaffold8913 Both SNP 0005.scaffold00021 115233 1 C T scaffold8913 ReadM SNP 0005.scaffold00021 115277 1 C T - ReadM SNP 0005.scaffold00021 115298 1 T A - Both SNP 0005.scaffold00021 115624 1 T A scaffold8913 Both SNP 0005.scaffold00021 115628 1 G A scaffold8913 Both SNP 0005.scaffold00021 116991 1 T C scaffold8913 Both SNP 0005.scaffold00021 117009 1 A G scaffold8913 Both INDEL 0005.scaffold00021 117206 1 . G scaffold8913 Both SNP 0005.scaffold00021 117441 1 G A scaffold8913 Both INDEL 0005.scaffold00021 117464 2 AG .. scaffold8913 Both SNP 0005.scaffold00021 119173 1 A T scaffold8913 ReadM SNP 0005.scaffold00021 119470 1 C T - ScafM SNP 0005.scaffold00021 119640 1 A G scaffold8913 Both SNP 0005.scaffold00021 119906 1 T C scaffold8913 Both SNP 0005.scaffold00021 119955 1 G A scaffold8913 Both SNP 0005.scaffold00021 120040 1 A T scaffold8913 Both SNP 0005.scaffold00021 120204 1 A G scaffold8913 Both SNP 0005.scaffold00021 120420 1 A G scaffold8913 Both SNP 0005.scaffold00021 120699 1 A G scaffold8913 Both SNP 0005.scaffold00021 120731 1 G A scaffold8913 ScafM SNP 0005.scaffold00021 120770 1 T C scaffold8913 ScafM SNP 0005.scaffold00021 120786 1 A T scaffold8913 Both SNP 0005.scaffold00021 120795 1 G T scaffold8913 Both SNP 0005.scaffold00021 120844 1 A G scaffold8913 Both SNP 0005.scaffold00021 120923 1 A G scaffold8913 Both SNP 0005.scaffold00021 120980 1 A G scaffold8913 Both SNP 0005.scaffold00021 121175 1 T C scaffold8913 Both SNP 0005.scaffold00021 121247 1 T C scaffold8913 ScafM SNP 0005.scaffold00021 121295 1 C A scaffold8913 Both INDEL 0005.scaffold00021 121402 1 A . scaffold8913 ScafM SNP 0005.scaffold00021 121412 1 A T scaffold8913 Both SNP 0005.scaffold00021 121457 1 C A scaffold8913 ScafM SNP 0005.scaffold00021 121514 1 C G scaffold8913 ScafM SNP 0005.scaffold00021 121516 1 G A scaffold8913 ScafM SNP 0005.scaffold00021 121594 1 A C scaffold8913 ScafM INDEL 0005.scaffold00021 121602 2 .. GT scaffold8913 ScafM INDEL 0005.scaffold00021 121629 50 TTCACCAAAAAAAAAAAGTTCACCAAAAAAAAAAAAAAGAGAGAGTGGAG .................................................. scaffold8913 ScafM SNP 0005.scaffold00021 121927 1 C T scaffold8913 ReadM SNP 0005.scaffold00021 129620 1 T C - ReadM SNP 0005.scaffold00021 129687 1 T C - ReadM SNP 0005.scaffold00021 130375 1 A G - ReadM SNP 0005.scaffold00021 130419 1 C T - ReadM SNP 0005.scaffold00021 130436 1 A C - ScafM SNP 0005.scaffold00021 130597 1 T C scaffold2268 ScafM INDEL 0005.scaffold00021 130666 1 . T scaffold2268 ScafM INDEL 0005.scaffold00021 130715 1 . C scaffold2268 ScafM SNP 0005.scaffold00021 130732 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 130735 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 130741 1 T C scaffold2268 ScafM SNP 0005.scaffold00021 130746 1 T A scaffold2268 ScafM INDEL 0005.scaffold00021 130818 2 AA .. scaffold2268 ScafM SNP 0005.scaffold00021 130855 1 C G scaffold2268 Both SNP 0005.scaffold00021 130871 1 G A scaffold2268 ScafM SNP 0005.scaffold00021 131027 2 CA TG scaffold2268 ScafM SNP 0005.scaffold00021 131068 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 131089 1 A G scaffold2268 ScafM SNP 0005.scaffold00021 131120 1 A G scaffold2268 ScafM SNP 0005.scaffold00021 131126 1 A G scaffold2268 ScafM SNP 0005.scaffold00021 131136 1 C T scaffold2268 Both SNP 0005.scaffold00021 131213 1 G T scaffold2268 ScafM SNP 0005.scaffold00021 131225 1 G T scaffold2268 ScafM INDEL 0005.scaffold00021 131249 1 A . scaffold2268 ScafM SNP 0005.scaffold00021 131251 1 T G scaffold2268 Both SNP 0005.scaffold00021 131305 1 A G scaffold2268 ScafM SNP 0005.scaffold00021 131367 1 G A scaffold2268 ScafM SNP 0005.scaffold00021 131374 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 131381 1 G T scaffold2268 ScafM SNP 0005.scaffold00021 131405 1 T G scaffold2268 ScafM SNP 0005.scaffold00021 131482 1 T G scaffold2268 ScafM SNP 0005.scaffold00021 131484 2 CA GC scaffold2268 ScafM SNP 0005.scaffold00021 131513 1 A T scaffold2268 Both SNP 0005.scaffold00021 131562 1 T G scaffold2268 ScafM SNP 0005.scaffold00021 131769 1 G A scaffold2268 ScafM SNP 0005.scaffold00021 131794 1 G T scaffold2268 ScafM SNP 0005.scaffold00021 131831 1 C G scaffold2268 ScafM SNP 0005.scaffold00021 131850 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 131966 1 G T scaffold2268 ScafM SNP 0005.scaffold00021 131969 3 GCT CAA scaffold2268 ScafM SNP 0005.scaffold00021 131973 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 131982 1 G T scaffold2268 ScafM INDEL 0005.scaffold00021 132051 5 ..... ATCGG scaffold2268 ScafM SNP 0005.scaffold00021 132065 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 132068 1 T C scaffold2268 ScafM SNP 0005.scaffold00021 132076 1 T C scaffold2268 ScafM SNP 0005.scaffold00021 132148 2 TT GC scaffold2268 ScafM SNP 0005.scaffold00021 132172 1 C T scaffold2268 ScafM SNP 0005.scaffold00021 132177 1 T C scaffold2268 ScafM SNP 0005.scaffold00021 132209 1 T C scaffold2268 ScafM SNP 0005.scaffold00021 132571 1 A G scaffold2268 ScafM SNP 0005.scaffold00021 132590 1 A T scaffold2268 ScafM SNP 0005.scaffold00021 132592 1 C T scaffold2268 ReadM SNP 0005.scaffold00021 147634 1 A G - ReadM SNP 0005.scaffold00021 148623 1 G C - ReadM SNP 0005.scaffold00021 150271 1 C A - ReadM SNP 0005.scaffold00021 150301 1 C T - ReadM SNP 0005.scaffold00021 150322 1 A C - ReadM SNP 0005.scaffold00021 150539 1 A G - ReadM SNP 0005.scaffold00021 150562 1 G C - ReadM SNP 0005.scaffold00021 150567 1 C T - ReadM SNP 0005.scaffold00021 150637 1 C A - ReadM SNP 0005.scaffold00021 158593 1 T C - ReadM SNP 0005.scaffold00021 158642 1 C A - ReadM SNP 0005.scaffold00021 158678 1 G T - ReadM SNP 0005.scaffold00021 158701 1 A G - ReadM SNP 0005.scaffold00021 158712 1 T C - ScafM INDEL 0005.scaffold00021 159329 4 .... TAAC scaffold2268 ScafM INDEL 0005.scaffold00021 159330 4 .... TATG scaffold2268 ScafM SNP 0005.scaffold00021 159358 1 T A scaffold2268 ReadM INDEL 0005.scaffold00021 159764 1 A . - ReadM SNP 0005.scaffold00021 159828 1 G A - ReadM SNP 0005.scaffold00021 159836 1 G A - ReadM SNP 0005.scaffold00021 159896 1 C T - ReadM SNP 0005.scaffold00021 159901 1 A G - ReadM SNP 0005.scaffold00021 159942 1 C T - ReadM SNP 0005.scaffold00021 159998 1 A G - ReadM SNP 0005.scaffold00021 160062 1 C T - ReadM SNP 0005.scaffold00021 160071 1 T G - ReadM SNP 0005.scaffold00021 160220 1 A G - ReadM SNP 0005.scaffold00021 160237 1 C T - ReadM SNP 0005.scaffold00021 160368 1 T A - ScafM SNP 0005.scaffold00021 161037 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 161066 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 161088 1 T C scaffold1508 ScafM SNP 0005.scaffold00021 161096 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 161100 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 161138 2 CT GC scaffold1508 ScafM SNP 0005.scaffold00021 161161 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 161173 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 161350 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 161361 1 T G scaffold1508 ScafM SNP 0005.scaffold00021 161373 1 G C scaffold1508 ScafM SNP 0005.scaffold00021 161394 1 G T scaffold1508 ScafM SNP 0005.scaffold00021 161411 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 161425 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 161473 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 161493 1 A G scaffold1508 ScafM INDEL 0005.scaffold00021 161511 1 A . scaffold1508 ScafM SNP 0005.scaffold00021 161526 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 161529 1 A T scaffold1508 ScafM SNP 0005.scaffold00021 161563 1 G A scaffold1508 Both SNP 0005.scaffold00021 161591 1 C T scaffold1508 Both SNP 0005.scaffold00021 161716 1 A G scaffold1508 Both SNP 0005.scaffold00021 161767 1 G A scaffold1508 Both SNP 0005.scaffold00021 161783 1 A G scaffold1508 Both SNP 0005.scaffold00021 161852 1 T C scaffold1508 Both SNP 0005.scaffold00021 161890 1 A C scaffold1508 ReadM SNP 0005.scaffold00021 162270 1 T G - ReadM SNP 0005.scaffold00021 162338 1 T C - ReadM SNP 0005.scaffold00021 162436 1 T C - ReadM SNP 0005.scaffold00021 162482 1 A G - ReadM SNP 0005.scaffold00021 162986 1 G A - ReadM SNP 0005.scaffold00021 162994 1 T C - ScafM SNP 0005.scaffold00021 165399 1 C T scaffold1508 ScafM INDEL 0005.scaffold00021 165452 1 T . scaffold1508 ScafM SNP 0005.scaffold00021 165502 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 165512 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 165579 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 165581 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 165597 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 165618 1 C T scaffold1508 ScafM SNP 0005.scaffold00021 165620 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 165640 1 C G scaffold1508 ScafM INDEL 0005.scaffold00021 165670 6 GTCTTC ...... scaffold1508 ScafM SNP 0005.scaffold00021 165689 1 T C scaffold1508 ScafM SNP 0005.scaffold00021 165707 1 C T scaffold1508 ScafM INDEL 0005.scaffold00021 165795 6 ...... CTTTCT scaffold1508 ScafM SNP 0005.scaffold00021 165824 1 G A scaffold1508 ScafM SNP 0005.scaffold00021 165835 1 C G scaffold1508 ScafM SNP 0005.scaffold00021 165837 1 T C scaffold1508 ScafM INDEL 0005.scaffold00021 165854 3 ... TTT scaffold1508 ScafM INDEL 0005.scaffold00021 165855 4 .... TTTG scaffold1508 ScafM INDEL 0005.scaffold00021 165858 1 . T scaffold1508 ScafM INDEL 0005.scaffold00021 165865 24 ........................ CGCAGCGGGTTTATTTGATGTGTT scaffold1508 ScafM INDEL 0005.scaffold00021 165868 4 .... CCGC scaffold1508 ScafM SNP 0005.scaffold00021 165871 1 T C scaffold1508 ScafM SNP 0005.scaffold00021 165881 1 G T scaffold1508 ScafM SNP 0005.scaffold00021 165900 1 A G scaffold1508 ScafM SNP 0005.scaffold00021 165958 1 A C scaffold1508 ScafM SNP 0005.scaffold00021 165964 1 G A scaffold1508 ReadM SNP 0005.scaffold00021 167280 1 A G - ReadM SNP 0005.scaffold00021 169041 1 T A - ReadM INDEL 0005.scaffold00021 169050 1 T . - ReadM SNP 0005.scaffold00021 169090 1 C T - ReadM SNP 0005.scaffold00021 169250 1 A C - ReadM SNP 0005.scaffold00021 169311 1 A C - ReadM SNP 0005.scaffold00021 187164 1 G T - ReadM SNP 0005.scaffold00021 187168 1 G C - ReadM SNP 0005.scaffold00021 191918 1 A G - ReadM SNP 0005.scaffold00021 191927 1 T G - ReadM SNP 0005.scaffold00021 199557 1 T G - ReadM SNP 0005.scaffold00021 200068 1 T G - ReadM SNP 0005.scaffold00021 200116 1 C A - ReadM INDEL 0005.scaffold00021 200157 1 A . - ReadM SNP 0005.scaffold00021 200220 1 T G - ReadM SNP 0005.scaffold00021 200373 1 T A - ReadM SNP 0005.scaffold00021 200382 1 G C - ReadM SNP 0005.scaffold00021 201207 1 T G - ReadM SNP 0005.scaffold00021 201404 1 T C - ReadM SNP 0005.scaffold00021 201422 1 T G - ScafM SNP 0005.scaffold00021 202696 1 C T scaffold2829 ScafM SNP 0005.scaffold00021 202707 1 T C scaffold2829 ScafM INDEL 0005.scaffold00021 202724 1 . A scaffold2829 ScafM SNP 0005.scaffold00021 202733 1 A T scaffold2829 ScafM SNP 0005.scaffold00021 202793 1 A G scaffold2829 ScafM SNP 0005.scaffold00021 202802 1 A C scaffold2829 ScafM SNP 0005.scaffold00021 202873 1 G A scaffold2829 ScafM SNP 0005.scaffold00021 202995 1 G A scaffold2829 ScafM INDEL 0005.scaffold00021 203019 1 A . scaffold2829 ScafM INDEL 0005.scaffold00021 203267 3 TTG ... scaffold6448 ScafM INDEL 0005.scaffold00021 203278 3 ... TTG scaffold6448 ScafM SNP 0005.scaffold00021 203302 1 G T scaffold6448 ScafM SNP 0005.scaffold00021 203340 1 A G scaffold6448 ScafM SNP 0005.scaffold00021 203359 1 A G scaffold6448 ScafM SNP 0005.scaffold00021 203378 1 G A scaffold6448 ScafM SNP 0005.scaffold00021 203412 1 G A scaffold6448 ScafM SNP 0005.scaffold00021 203421 1 C A scaffold6448 ScafM SNP 0005.scaffold00021 203458 1 A G scaffold6448 ScafM SNP 0005.scaffold00021 203466 1 C T scaffold6448 ScafM SNP 0005.scaffold00021 203491 1 T G scaffold6448 ScafM SNP 0005.scaffold00021 203496 1 G A scaffold6448 ScafM SNP 0005.scaffold00021 203514 1 G T scaffold6448 ScafM SNP 0005.scaffold00021 203535 1 T A scaffold6448 ScafM INDEL 0005.scaffold00021 203556 1 . G scaffold6448 ScafM INDEL 0005.scaffold00021 203557 1 . G scaffold6448 ScafM INDEL 0005.scaffold00021 203561 17 ................. AGGGAGAGGAGAGAGAA scaffold6448 ScafM INDEL 0005.scaffold00021 203562 2 .. GA scaffold6448 ScafM SNP 0005.scaffold00021 203587 2 AT CG scaffold6448 ScafM SNP 0005.scaffold00021 203592 1 T C scaffold6448 ScafM INDEL 0005.scaffold00021 203599 1 . T scaffold6448 ScafM SNP 0005.scaffold00021 203603 1 C A scaffold6448 ScafM INDEL 0005.scaffold00021 203618 2 TA .C scaffold6448 ReadM SNP 0005.scaffold00021 204658 1 T C - ReadM SNP 0005.scaffold00021 204680 1 T C - ReadM SNP 0005.scaffold00021 204732 1 G A - ReadM SNP 0005.scaffold00021 204761 1 A G - ReadM SNP 0005.scaffold00021 204811 1 T C - ReadM INDEL 0005.scaffold00021 204829 1 A . - ReadM SNP 0005.scaffold00021 204933 1 G A - ScafM SNP 0005.scaffold00021 206394 1 T G scaffold4175 ReadM SNP 0005.scaffold00021 206657 1 T C - ReadM SNP 0005.scaffold00021 206717 1 A C - ReadM SNP 0005.scaffold00021 206885 1 C A - ReadM SNP 0005.scaffold00021 208009 1 A G - ReadM SNP 0005.scaffold00021 208060 1 A G - ReadM SNP 0005.scaffold00021 208277 1 T A - ReadM SNP 0005.scaffold00021 208319 1 G T - ReadM SNP 0005.scaffold00021 208326 1 G A - ScafM SNP 0005.scaffold00021 208452 2 TG AC scaffold16776 ScafM SNP 0005.scaffold00021 208465 1 C G scaffold16776 ScafM SNP 0005.scaffold00021 208500 1 A G scaffold16776 ScafM SNP 0005.scaffold00021 208517 1 C A scaffold16776 ScafM INDEL 0005.scaffold00021 208582 1 . 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AA - ReadM SNP 0005.scaffold00021 220423 1 A C - ReadM SNP 0005.scaffold00021 220531 1 G C - ReadM SNP 0005.scaffold00021 220630 1 A T - ReadM SNP 0005.scaffold00021 220698 1 A G - ReadM SNP 0005.scaffold00021 220714 1 C G - ReadM SNP 0005.scaffold00021 220789 1 C A - ReadM SNP 0005.scaffold00021 220819 1 G A - ReadM SNP 0005.scaffold00021 220838 1 C G - ReadM SNP 0005.scaffold00021 220853 1 T C - ReadM SNP 0005.scaffold00021 220903 1 A G - ReadM SNP 0005.scaffold00021 220957 1 G T - ReadM SNP 0005.scaffold00021 221006 1 G A - ReadM SNP 0005.scaffold00021 221018 1 A G - ReadM SNP 0005.scaffold00021 221135 1 C T - ReadM SNP 0005.scaffold00021 221163 1 G A - ReadM SNP 0005.scaffold00021 221238 1 A G - ReadM SNP 0005.scaffold00021 221383 1 T C - ReadM SNP 0005.scaffold00021 221407 1 C T - ReadM SNP 0005.scaffold00021 221547 1 G A - ReadM SNP 0005.scaffold00021 221787 1 G A - ReadM SNP 0005.scaffold00021 221834 1 T A - ReadM SNP 0005.scaffold00021 221838 1 T C - ScafM SNP 0005.scaffold00021 222338 1 A G scaffold16776 ScafM SNP 0005.scaffold00021 222634 1 T A scaffold16776 ScafM INDEL 0005.scaffold00021 222642 63 GAACATGTTTTTAACTGTGTGATAAAAAGAAAAGAATGCAATTCACCCAATCAAAAACTAAGT ............................................................... scaffold16776 ScafM INDEL 0005.scaffold00021 222706 2 GC .. scaffold16776 ReadM SNP 0005.scaffold00021 222939 1 T C - ReadM SNP 0005.scaffold00021 222949 1 G A - ReadM SNP 0005.scaffold00021 222995 1 G A - ScafM SNP 0005.scaffold00021 223069 1 A G scaffold16776 Both SNP 0005.scaffold00021 223092 1 C G scaffold16776 Both SNP 0005.scaffold00021 223096 1 A G scaffold16776 Both SNP 0005.scaffold00021 223135 1 G A scaffold16776 Both SNP 0005.scaffold00021 223243 1 T A scaffold16776 Both SNP 0005.scaffold00021 223498 1 C A scaffold16776 Both SNP 0005.scaffold00021 223504 1 G A scaffold16776 Both SNP 0005.scaffold00021 223624 1 A C scaffold16776 Both SNP 0005.scaffold00021 223801 1 C G scaffold16776 Both SNP 0005.scaffold00021 224005 1 A T scaffold16776 Both SNP 0005.scaffold00021 224111 1 G A scaffold16776 Both INDEL 0005.scaffold00021 224439 1 C . scaffold16776 Both SNP 0005.scaffold00021 224663 1 C G scaffold16776 Both SNP 0005.scaffold00021 224684 1 C A scaffold16776 Both SNP 0005.scaffold00021 224777 1 G T scaffold16776 Both SNP 0005.scaffold00021 224882 1 A T scaffold16776 Both SNP 0005.scaffold00021 224936 1 C T scaffold16776 Both SNP 0005.scaffold00021 225014 1 A T scaffold16776 Both SNP 0005.scaffold00021 225083 1 A G scaffold16776 Both SNP 0005.scaffold00021 225167 1 G C scaffold16776 ScafM SNP 0005.scaffold00021 225483 1 T C scaffold16776 ScafM SNP 0005.scaffold00021 225512 1 A T scaffold16776 ScafM SNP 0005.scaffold00021 225531 1 A T scaffold16776 ScafM SNP 0005.scaffold00021 225548 2 AA CT scaffold16776 ScafM SNP 0005.scaffold00021 225572 1 A G scaffold16776 ScafM SNP 0005.scaffold00021 228640 1 C G scaffold16776 ScafM SNP 0005.scaffold00021 228661 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 229585 1 A C scaffold16776 ScafM SNP 0005.scaffold00021 229600 1 T C scaffold16776 ScafM SNP 0005.scaffold00021 229616 1 C A scaffold16776 ScafM SNP 0005.scaffold00021 229688 1 T A scaffold16776 Both SNP 0005.scaffold00021 229702 1 A G scaffold16776 Both SNP 0005.scaffold00021 229716 1 T C scaffold16776 Both SNP 0005.scaffold00021 229791 1 C T scaffold16776 Both SNP 0005.scaffold00021 230023 1 A C scaffold16776 Both SNP 0005.scaffold00021 230059 1 A G scaffold16776 Both SNP 0005.scaffold00021 230088 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 230524 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 230566 1 T G scaffold16776 ScafM INDEL 0005.scaffold00021 230572 1 . T scaffold16776 ScafM SNP 0005.scaffold00021 230644 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 230712 1 T A scaffold16776 ScafM SNP 0005.scaffold00021 230729 1 A T scaffold16776 ScafM SNP 0005.scaffold00021 230780 1 T C scaffold16776 ScafM SNP 0005.scaffold00021 230782 1 T A scaffold16776 ScafM SNP 0005.scaffold00021 230793 1 T A scaffold16776 ScafM SNP 0005.scaffold00021 230797 1 T A scaffold16776 ScafM INDEL 0005.scaffold00021 230819 1 . T scaffold16776 ScafM SNP 0005.scaffold00021 230839 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 230877 1 A T scaffold16776 ScafM SNP 0005.scaffold00021 230895 1 A G scaffold16776 ScafM SNP 0005.scaffold00021 230965 1 C G scaffold16776 ScafM SNP 0005.scaffold00021 231039 1 T A scaffold16776 ScafM SNP 0005.scaffold00021 231054 1 A G scaffold16776 ScafM SNP 0005.scaffold00021 231194 1 T A scaffold16776 ScafM SNP 0005.scaffold00021 231349 1 T G scaffold16776 ReadM SNP 0005.scaffold00021 231985 1 T A - ScafM INDEL 0005.scaffold00021 232477 5 ..... ATAAC scaffold16776 ScafM INDEL 0005.scaffold00021 233028 8 AATTATTT ........ scaffold16776 ScafM INDEL 0005.scaffold00021 233150 2 .. AA scaffold16776 ScafM SNP 0005.scaffold00021 233152 1 T A scaffold16776 Both SNP 0005.scaffold00021 233292 1 G A scaffold16776 ReadM SNP 0005.scaffold00021 233557 1 A G - ReadM INDEL 0005.scaffold00021 233992 1 . A - ReadM SNP 0005.scaffold00021 234039 1 C T - ScafM SNP 0005.scaffold00021 234487 1 T C scaffold16776 ScafM SNP 0005.scaffold00021 234540 1 C T scaffold16776 Both SNP 0005.scaffold00021 234940 1 C T scaffold16776 Both SNP 0005.scaffold00021 234944 1 G A scaffold16776 ScafM SNP 0005.scaffold00021 234969 2 TA AT scaffold16776 ScafM INDEL 0005.scaffold00021 235114 66 GTTATATAGTTTGAATTTAATTTCATTGAATTGGATAGTGCTGTAGGAAAGCTATAATCTTGTTTA .................................................................. scaffold16776 Both SNP 0005.scaffold00021 235265 1 T C scaffold16776 ScafM SNP 0005.scaffold00021 235549 1 G T scaffold16776 Both SNP 0005.scaffold00021 235835 1 A C scaffold16776 Both SNP 0005.scaffold00021 235906 1 A C scaffold16776 Both SNP 0005.scaffold00021 235936 1 G T scaffold16776 ScafM INDEL 0005.scaffold00021 236111 1 . T scaffold16776 ReadM SNP 0005.scaffold00021 236446 1 C G - ReadM SNP 0005.scaffold00021 236538 1 C G - ReadM SNP 0005.scaffold00021 236752 1 C T - ReadM SNP 0005.scaffold00021 237849 1 G C - ScafM SNP 0005.scaffold00021 238264 1 A G scaffold10732 ScafM SNP 0005.scaffold00021 238269 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238295 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238298 1 G T scaffold10732 ScafM SNP 0005.scaffold00021 238382 1 T G scaffold10732 ScafM SNP 0005.scaffold00021 238392 1 T A scaffold10732 ScafM SNP 0005.scaffold00021 238404 1 T C scaffold10732 ScafM SNP 0005.scaffold00021 238406 1 T A scaffold10732 ScafM SNP 0005.scaffold00021 238420 1 A G scaffold10732 ScafM SNP 0005.scaffold00021 238424 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238431 1 G A scaffold10732 ScafM SNP 0005.scaffold00021 238461 1 T A scaffold10732 ScafM SNP 0005.scaffold00021 238463 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238470 1 A G scaffold10732 ScafM SNP 0005.scaffold00021 238499 1 A G scaffold10732 ReadM SNP 0005.scaffold00021 238530 1 C T - ScafM SNP 0005.scaffold00021 238560 1 T A scaffold10732 ScafM SNP 0005.scaffold00021 238599 1 G A scaffold10732 ScafM SNP 0005.scaffold00021 238604 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238643 1 A G scaffold10732 ScafM SNP 0005.scaffold00021 238660 1 A C scaffold10732 ScafM SNP 0005.scaffold00021 238682 1 T C scaffold10732 ScafM SNP 0005.scaffold00021 238687 1 G T scaffold10732 ScafM SNP 0005.scaffold00021 238708 2 TG CA scaffold10732 ScafM SNP 0005.scaffold00021 238727 1 A G scaffold10732 ScafM SNP 0005.scaffold00021 238763 1 C T scaffold10732 ScafM SNP 0005.scaffold00021 238781 1 C T scaffold10732 Both SNP 0005.scaffold00021 239648 1 T C scaffold34417 Both SNP 0005.scaffold00021 239954 1 T C scaffold34417 Both SNP 0005.scaffold00021 240080 1 C A scaffold34417 Both SNP 0005.scaffold00021 240554 1 A G scaffold34417 ReadM INDEL 0005.scaffold00021 241681 3 CAA ... - ReadM INDEL 0005.scaffold00021 241812 1 . A - ReadM SNP 0005.scaffold00021 241973 1 A G - ReadM SNP 0005.scaffold00021 242443 1 T G - ScafM SNP 0005.scaffold00021 243294 1 A G scaffold7142 ScafM SNP 0005.scaffold00021 243322 1 C A scaffold7142 ScafM SNP 0005.scaffold00021 243331 1 T A scaffold7142 ScafM SNP 0005.scaffold00021 243352 1 T G scaffold7142 ScafM SNP 0005.scaffold00021 243389 1 T G scaffold7142 ScafM SNP 0005.scaffold00021 243406 1 T A scaffold7142 ScafM SNP 0005.scaffold00021 243481 1 C A scaffold7142 ReadM SNP 0005.scaffold00021 243759 1 T A - Both SNP 0005.scaffold00021 243788 1 G A scaffold7142 Both SNP 0005.scaffold00021 243790 1 C T scaffold7142 ScafM SNP 0005.scaffold00021 244050 1 T C scaffold7142 ScafM INDEL 0005.scaffold00021 244146 2 TT .. scaffold7142 Both SNP 0005.scaffold00021 244527 1 T A scaffold7142 Both SNP 0005.scaffold00021 245706 1 T C scaffold7142 ScafM INDEL 0005.scaffold00021 245730 70 ...................................................................... CACATCCACAAATTGCATAAACCTTACGAAAAGCAAGTGAATCTACTGCTAGTGTCCTACAAAAATCACA scaffold7142 Both SNP 0005.scaffold00021 245741 1 A G scaffold7142 Both INDEL 0005.scaffold00021 245751 1 . C scaffold7142 ReadM SNP 0005.scaffold00021 248962 1 G T - ReadM SNP 0005.scaffold00021 250193 1 T C - ReadM SNP 0005.scaffold00021 253353 1 A G - ReadM SNP 0005.scaffold00021 257293 1 A C - ReadM SNP 0005.scaffold00021 257341 1 G A - ReadM SNP 0005.scaffold00021 257376 1 T C - ReadM SNP 0005.scaffold00021 257497 1 G C - ReadM SNP 0005.scaffold00021 258101 1 G A - ReadM SNP 0005.scaffold00021 258357 1 T C - ReadM SNP 0005.scaffold00021 258557 1 C A - ReadM SNP 0005.scaffold00021 258713 1 A C - ReadM SNP 0005.scaffold00021 258977 1 C T - ReadM SNP 0005.scaffold00021 259123 1 A C - ReadM SNP 0005.scaffold00021 259252 1 G A - ReadM SNP 0005.scaffold00021 262779 1 T C - ReadM SNP 0005.scaffold00021 262810 1 C T - ReadM SNP 0005.scaffold00021 262893 1 T A - ReadM SNP 0005.scaffold00021 262909 1 T C - ReadM SNP 0005.scaffold00021 263469 1 T C - ReadM SNP 0005.scaffold00021 263813 1 T C - ReadM SNP 0005.scaffold00021 264050 1 T C - ReadM SNP 0005.scaffold00021 264784 1 G C - ReadM INDEL 0005.scaffold00021 265263 1 T . - ReadM SNP 0005.scaffold00021 265321 1 C T - ReadM SNP 0005.scaffold00021 265461 1 A G - ReadM SNP 0005.scaffold00021 265500 1 C A - ReadM SNP 0005.scaffold00021 265629 1 A G - ReadM SNP 0005.scaffold00021 265918 1 C T - ReadM SNP 0005.scaffold00021 266014 1 G T - ReadM SNP 0005.scaffold00021 266081 1 C T - ReadM SNP 0005.scaffold00021 266145 1 C T - ReadM SNP 0005.scaffold00021 266174 1 G A - ReadM SNP 0005.scaffold00021 266357 1 C T - ReadM SNP 0005.scaffold00021 266457 1 T C - ReadM SNP 0005.scaffold00021 266476 1 A G - ReadM SNP 0005.scaffold00021 267012 1 A G - ReadM SNP 0005.scaffold00021 267460 1 T C - ReadM INDEL 0005.scaffold00021 267511 1 . G - ReadM SNP 0005.scaffold00021 267521 1 T G - ReadM SNP 0005.scaffold00021 267843 1 G A - ReadM SNP 0005.scaffold00021 268069 1 A G - ReadM SNP 0005.scaffold00021 268198 1 T C - ReadM SNP 0005.scaffold00021 268312 1 C T - ReadM SNP 0005.scaffold00021 268584 1 T C - Both SNP 0005.scaffold00021 269263 1 T A scaffold1050 ReadM SNP 0005.scaffold00021 269572 1 G A - ReadM SNP 0005.scaffold00021 269591 1 G A - ReadM SNP 0005.scaffold00021 269667 1 T C - Both SNP 0005.scaffold00021 269739 1 T C scaffold1050 ReadM SNP 0005.scaffold00021 270023 1 A G - ReadM SNP 0005.scaffold00021 270275 1 C G - ReadM SNP 0005.scaffold00021 270483 1 T A - ReadM SNP 0005.scaffold00021 271124 1 A G - ReadM SNP 0005.scaffold00021 271551 1 C T - ReadM SNP 0005.scaffold00021 272416 1 C A - ReadM SNP 0005.scaffold00021 272956 1 C G - ReadM SNP 0005.scaffold00021 273131 1 G A - ReadM SNP 0005.scaffold00021 273367 1 C T - ReadM SNP 0005.scaffold00021 273530 1 A C - ReadM SNP 0005.scaffold00021 273756 1 C A - ScafM INDEL 0006.scaffold00022 77 3 ... TTC scaffold6337 ScafM SNP 0006.scaffold00022 84 1 A C scaffold6337 ScafM SNP 0006.scaffold00022 86 1 T C scaffold6337 ScafM SNP 0006.scaffold00022 98 1 A G scaffold6337 ScafM SNP 0006.scaffold00022 127 1 T A scaffold6337 ScafM SNP 0006.scaffold00022 361 1 C T scaffold6337 ScafM SNP 0006.scaffold00022 374 1 A T scaffold6337 ScafM SNP 0006.scaffold00022 377 1 A G scaffold6337 ScafM SNP 0006.scaffold00022 420 1 C T scaffold6337 Both SNP 0006.scaffold00022 618 1 A T scaffold6337 Both SNP 0006.scaffold00022 671 1 G A scaffold6337 Both SNP 0006.scaffold00022 811 1 A T scaffold6337 Both SNP 0006.scaffold00022 840 1 T G scaffold6337 ReadM SNP 0006.scaffold00022 1188 1 G A - ReadM SNP 0006.scaffold00022 1245 1 A G - ReadM SNP 0006.scaffold00022 1254 1 A G - ReadM INDEL 0006.scaffold00022 1312 1 A . - ScafM SNP 0006.scaffold00022 2040 2 CA AT scaffold6337 ScafM SNP 0006.scaffold00022 2082 1 T C scaffold6337 ScafM SNP 0006.scaffold00022 2120 1 C T scaffold6337 ScafM SNP 0006.scaffold00022 2126 1 C T scaffold6337 ReadM SNP 0006.scaffold00022 2938 1 G T - ReadM SNP 0006.scaffold00022 2941 1 T C - ReadM SNP 0006.scaffold00022 2985 1 A C - ReadM SNP 0006.scaffold00022 3471 1 G A - ScafM SNP 0006.scaffold00022 3600 1 C T scaffold3874 ScafM SNP 0006.scaffold00022 3666 2 TA GC scaffold3874 ScafM SNP 0006.scaffold00022 3678 1 A T scaffold3874 ScafM SNP 0006.scaffold00022 3683 2 GG AA scaffold3874 ScafM SNP 0006.scaffold00022 3700 1 A C scaffold3874 ScafM SNP 0006.scaffold00022 3703 1 A C scaffold3874 ReadM SNP 0006.scaffold00022 3704 1 C G - ReadM SNP 0006.scaffold00022 3716 1 C T - ReadM SNP 0006.scaffold00022 3726 1 C T - ReadM SNP 0006.scaffold00022 3872 1 G C - ReadM SNP 0006.scaffold00022 3921 1 T C - ReadM SNP 0006.scaffold00022 4234 1 C T - ScafM INDEL 0006.scaffold00022 4608 1 C . scaffold8781 ScafM SNP 0006.scaffold00022 4662 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 4684 1 A C scaffold8781 ScafM SNP 0006.scaffold00022 4723 1 C G scaffold8781 ScafM SNP 0006.scaffold00022 4737 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 4761 1 A G scaffold8781 ScafM INDEL 0006.scaffold00022 4798 2 GG .. scaffold8781 ScafM SNP 0006.scaffold00022 4802 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 5299 1 T A scaffold8781 ScafM SNP 0006.scaffold00022 5304 1 T C scaffold8781 Both SNP 0006.scaffold00022 5466 1 T C scaffold8781 Both SNP 0006.scaffold00022 5498 1 C T scaffold8781 Both SNP 0006.scaffold00022 5620 1 G A scaffold8781 Both SNP 0006.scaffold00022 5845 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 5873 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 5875 1 T A scaffold8781 ScafM INDEL 0006.scaffold00022 5969 3 ..A TTT scaffold8781 Both SNP 0006.scaffold00022 6025 1 C T scaffold8781 Both SNP 0006.scaffold00022 6056 1 C A scaffold8781 Both SNP 0006.scaffold00022 6060 1 T C scaffold8781 ReadM SNP 0006.scaffold00022 6135 1 A G - ReadM SNP 0006.scaffold00022 6221 1 G C - ReadM INDEL 0006.scaffold00022 6431 1 C . - ReadM SNP 0006.scaffold00022 6464 1 T C - ReadM SNP 0006.scaffold00022 6519 1 C T - ReadM SNP 0006.scaffold00022 6670 1 A T - ReadM SNP 0006.scaffold00022 6677 1 A G - ReadM SNP 0006.scaffold00022 6800 1 T C - ReadM SNP 0006.scaffold00022 6836 1 C T - ReadM SNP 0006.scaffold00022 6862 1 C T - ReadM SNP 0006.scaffold00022 6899 1 T G - ReadM SNP 0006.scaffold00022 6943 1 C T - ReadM SNP 0006.scaffold00022 7342 1 C G - ReadM SNP 0006.scaffold00022 7364 1 C G - ReadM SNP 0006.scaffold00022 7744 1 G T - ReadM SNP 0006.scaffold00022 7790 1 T C - ReadM SNP 0006.scaffold00022 7824 1 A T - ReadM SNP 0006.scaffold00022 7881 1 G A - ReadM SNP 0006.scaffold00022 7893 1 A T - ReadM SNP 0006.scaffold00022 7991 1 C T - ReadM SNP 0006.scaffold00022 8118 1 G C - ReadM SNP 0006.scaffold00022 8140 1 C T - ReadM SNP 0006.scaffold00022 8230 1 G A - ReadM SNP 0006.scaffold00022 8310 1 A G - ScafM SNP 0006.scaffold00022 8529 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 8880 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 8907 1 G A scaffold8781 Both SNP 0006.scaffold00022 9037 1 G A scaffold8781 Both SNP 0006.scaffold00022 9064 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 9477 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 9488 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 9546 1 C A scaffold8781 ScafM SNP 0006.scaffold00022 9586 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 9641 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 9646 1 A T scaffold8781 ScafM INDEL 0006.scaffold00022 10140 1 . A scaffold8781 ScafM SNP 0006.scaffold00022 10142 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 10145 1 C T scaffold8781 ScafM INDEL 0006.scaffold00022 10155 1 G . scaffold8781 ScafM INDEL 0006.scaffold00022 10158 1 C . scaffold8781 ScafM SNP 0006.scaffold00022 10226 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 10242 1 A G scaffold8781 Both SNP 0006.scaffold00022 10267 1 T G scaffold8781 Both SNP 0006.scaffold00022 10276 1 T C scaffold8781 Both SNP 0006.scaffold00022 10352 1 A C scaffold8781 Both SNP 0006.scaffold00022 10437 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 11104 1 A C scaffold8781 Both SNP 0006.scaffold00022 11238 1 A G scaffold8781 ReadM SNP 0006.scaffold00022 11327 1 G A - ReadM SNP 0006.scaffold00022 11379 1 C T - ReadM SNP 0006.scaffold00022 11392 1 A G - ReadM SNP 0006.scaffold00022 11507 1 A C - ReadM SNP 0006.scaffold00022 11567 1 G A - ReadM SNP 0006.scaffold00022 11625 1 A C - ReadM SNP 0006.scaffold00022 11689 1 A G - ReadM SNP 0006.scaffold00022 11707 1 G A - Both INDEL 0006.scaffold00022 11713 1 . A scaffold8781 ReadM SNP 0006.scaffold00022 11826 1 G T - ReadM SNP 0006.scaffold00022 12007 1 T A - ReadM SNP 0006.scaffold00022 12099 1 T G - Both INDEL 0006.scaffold00022 12944 1 . G scaffold8781 Both SNP 0006.scaffold00022 12991 1 T A scaffold8781 Both SNP 0006.scaffold00022 13101 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 13255 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 13561 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 13563 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 13581 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 13584 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 13589 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 13592 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 13620 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 13638 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 15127 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 15145 2 AT TA scaffold8781 ReadM SNP 0006.scaffold00022 15422 1 C T - ReadM SNP 0006.scaffold00022 15462 1 A C - ReadM SNP 0006.scaffold00022 15630 1 C T - ReadM SNP 0006.scaffold00022 15673 1 G T - ReadM INDEL 0006.scaffold00022 15765 1 . T - ReadM SNP 0006.scaffold00022 15779 1 C T - ReadM SNP 0006.scaffold00022 15818 1 A G - ReadM SNP 0006.scaffold00022 15980 1 A T - ReadM SNP 0006.scaffold00022 15994 1 T C - ReadM SNP 0006.scaffold00022 16124 1 T C - ReadM SNP 0006.scaffold00022 16340 1 G A - ReadM SNP 0006.scaffold00022 16768 1 A G - Both SNP 0006.scaffold00022 16826 1 C A scaffold8781 Both SNP 0006.scaffold00022 16874 1 C T scaffold8781 ReadM SNP 0006.scaffold00022 16949 1 C T - ReadM SNP 0006.scaffold00022 17073 1 C T - ReadM SNP 0006.scaffold00022 17097 1 T C - ReadM INDEL 0006.scaffold00022 17175 1 A . - ReadM SNP 0006.scaffold00022 17239 1 A G - ReadM SNP 0006.scaffold00022 17317 1 T A - ReadM SNP 0006.scaffold00022 17330 1 C T - ReadM INDEL 0006.scaffold00022 17361 1 . G - ReadM SNP 0006.scaffold00022 17475 1 T A - ReadM SNP 0006.scaffold00022 17578 1 C T - ReadM SNP 0006.scaffold00022 17624 1 C A - ReadM SNP 0006.scaffold00022 17660 1 T C - ScafM SNP 0006.scaffold00022 17696 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 17717 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 17724 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 17913 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 17920 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 17953 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 17963 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 17969 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 19345 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 19349 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 19384 1 T C scaffold8781 ScafM INDEL 0006.scaffold00022 19414 1 . A scaffold8781 ScafM INDEL 0006.scaffold00022 19418 6 ...... CATCGT scaffold8781 Both INDEL 0006.scaffold00022 19626 1 A . scaffold8781 Both SNP 0006.scaffold00022 19634 1 T C scaffold8781 Both SNP 0006.scaffold00022 19649 1 C G scaffold8781 Both SNP 0006.scaffold00022 19702 1 C A scaffold8781 ScafM INDEL 0006.scaffold00022 19776 1 . A scaffold8781 ScafM SNP 0006.scaffold00022 19793 1 C G scaffold8781 ScafM INDEL 0006.scaffold00022 19795 1 . T scaffold8781 ScafM INDEL 0006.scaffold00022 19866 2 .. AG scaffold8781 Both SNP 0006.scaffold00022 19919 1 G A scaffold8781 Both SNP 0006.scaffold00022 19935 1 G A scaffold8781 Both SNP 0006.scaffold00022 20043 2 CC TT scaffold8781 Both INDEL 0006.scaffold00022 20255 1 T . scaffold8781 ReadM INDEL 0006.scaffold00022 20365 1 . T - ScafM INDEL 0006.scaffold00022 20365 2 .C TT scaffold8781 ScafM SNP 0006.scaffold00022 20421 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 20423 1 A G scaffold8781 Both SNP 0006.scaffold00022 20463 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 20497 2 CA TT scaffold8781 Both SNP 0006.scaffold00022 20585 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 20599 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 20602 1 T C scaffold8781 ScafM INDEL 0006.scaffold00022 20632 4 ...A TGTT scaffold8781 ScafM SNP 0006.scaffold00022 20831 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 20837 1 T A scaffold8781 ScafM SNP 0006.scaffold00022 20843 3 CAA TGG scaffold8781 ScafM SNP 0006.scaffold00022 20858 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 20882 1 G A scaffold8781 ScafM INDEL 0006.scaffold00022 20898 1 T . scaffold8781 ScafM SNP 0006.scaffold00022 20901 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 20904 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 20927 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 20952 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 20955 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 20959 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 20984 1 A T scaffold8781 ScafM INDEL 0006.scaffold00022 21125 2 .. TT scaffold8781 ScafM INDEL 0006.scaffold00022 21126 1 . A scaffold8781 ScafM INDEL 0006.scaffold00022 21157 17 ................. AGTTTTAAATAATAGAT scaffold8781 ScafM SNP 0006.scaffold00022 21191 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 21206 1 A C scaffold8781 ScafM SNP 0006.scaffold00022 21213 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 21216 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 21232 1 A T scaffold8781 ScafM SNP 0006.scaffold00022 21249 1 G T scaffold8781 ScafM SNP 0006.scaffold00022 21252 1 A G scaffold8781 ScafM INDEL 0006.scaffold00022 21436 8 ........ CACTAGTA scaffold8781 ScafM SNP 0006.scaffold00022 21526 1 C A scaffold8781 Both SNP 0006.scaffold00022 21581 1 A C scaffold8781 Both SNP 0006.scaffold00022 21587 1 T G scaffold8781 Both SNP 0006.scaffold00022 21760 1 A G scaffold8781 ScafM SNP 0006.scaffold00022 21790 1 A C scaffold8781 ScafM SNP 0006.scaffold00022 21801 1 C A scaffold8781 ScafM SNP 0006.scaffold00022 21820 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 21847 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 21879 2 TG CC scaffold8781 ScafM INDEL 0006.scaffold00022 21888 4 GTAC .... scaffold8781 ScafM SNP 0006.scaffold00022 21929 2 CT TC scaffold8781 ScafM SNP 0006.scaffold00022 21934 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 22118 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 22139 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 22166 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 22178 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 22194 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 22233 1 C G scaffold8781 ScafM SNP 0006.scaffold00022 22251 1 C A scaffold8781 ScafM SNP 0006.scaffold00022 22264 1 T C scaffold8781 ScafM INDEL 0006.scaffold00022 22288 7 ACTTATA ....... scaffold8781 ScafM SNP 0006.scaffold00022 22322 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 22333 1 T A scaffold8781 ScafM SNP 0006.scaffold00022 22357 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 22377 1 T C scaffold8781 ScafM INDEL 0006.scaffold00022 22384 2 GT .C scaffold8781 ScafM SNP 0006.scaffold00022 22396 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 22399 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 22749 1 G A scaffold8781 Both SNP 0006.scaffold00022 22882 1 C A scaffold8781 Both SNP 0006.scaffold00022 22948 1 A T scaffold8781 Both SNP 0006.scaffold00022 23115 1 T G scaffold8781 Both SNP 0006.scaffold00022 23173 1 A G scaffold8781 Both SNP 0006.scaffold00022 23437 1 C T scaffold8781 Both SNP 0006.scaffold00022 23493 1 G A scaffold8781 ScafM INDEL 0006.scaffold00022 23523 2 AA .. scaffold8781 ScafM SNP 0006.scaffold00022 23526 1 A T scaffold8781 Both SNP 0006.scaffold00022 23562 1 G A scaffold8781 Both SNP 0006.scaffold00022 23574 1 C T scaffold8781 Both SNP 0006.scaffold00022 23767 1 T C scaffold8781 Both SNP 0006.scaffold00022 24080 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 24261 1 A T scaffold8781 Both SNP 0006.scaffold00022 24270 1 G T scaffold8781 Both SNP 0006.scaffold00022 24359 1 T C scaffold8781 Both SNP 0006.scaffold00022 24487 1 T G scaffold8781 ScafM INDEL 0006.scaffold00022 24527 12 AGCTAAACATGC ............ scaffold8781 Both SNP 0006.scaffold00022 24624 1 A G scaffold8781 Both SNP 0006.scaffold00022 24645 1 T C scaffold8781 Both SNP 0006.scaffold00022 24674 1 T C scaffold8781 Both SNP 0006.scaffold00022 24714 1 G A scaffold8781 Both SNP 0006.scaffold00022 24762 1 T G scaffold8781 Both SNP 0006.scaffold00022 24807 1 G A scaffold8781 Both SNP 0006.scaffold00022 24813 1 G A scaffold8781 Both SNP 0006.scaffold00022 24842 1 C T scaffold8781 Both SNP 0006.scaffold00022 24875 1 A G scaffold8781 Both SNP 0006.scaffold00022 24912 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 24933 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 24939 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 24942 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 24952 1 A C scaffold8781 ScafM SNP 0006.scaffold00022 24960 1 C G scaffold8781 ScafM SNP 0006.scaffold00022 24964 1 A C scaffold8781 ScafM SNP 0006.scaffold00022 24969 1 C G scaffold8781 ScafM SNP 0006.scaffold00022 24975 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 24993 1 T C scaffold8781 ScafM SNP 0006.scaffold00022 25050 1 C A scaffold8781 ScafM SNP 0006.scaffold00022 25075 1 C T scaffold8781 ScafM SNP 0006.scaffold00022 25100 1 C G scaffold8781 ScafM INDEL 0006.scaffold00022 25114 1 . C scaffold8781 ScafM SNP 0006.scaffold00022 25117 1 T G scaffold8781 ScafM SNP 0006.scaffold00022 25182 1 G A scaffold8781 ScafM SNP 0006.scaffold00022 25209 1 G C scaffold8781 ScafM INDEL 0006.scaffold00022 25265 7 CATTGAG ....... scaffold8781 ScafM SNP 0006.scaffold00022 25472 1 T C scaffold8781 ScafM INDEL 0006.scaffold00022 25499 1 . C scaffold8781 ScafM SNP 0006.scaffold00022 26029 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 26089 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 26094 1 G A scaffold7389 ReadM SNP 0006.scaffold00022 26687 1 T C - ReadM SNP 0006.scaffold00022 26933 1 C T - ReadM SNP 0006.scaffold00022 27012 1 A G - ReadM SNP 0006.scaffold00022 27070 1 T G - ReadM SNP 0006.scaffold00022 27349 1 A G - ScafM SNP 0006.scaffold00022 27635 1 C T scaffold7389 Both SNP 0006.scaffold00022 27667 1 A T scaffold7389 Both SNP 0006.scaffold00022 27692 1 G A scaffold7389 Both SNP 0006.scaffold00022 27770 1 A T scaffold7389 Both SNP 0006.scaffold00022 27830 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 27839 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 27850 1 C T scaffold7389 ReadM SNP 0006.scaffold00022 27944 1 C A - ReadM SNP 0006.scaffold00022 27972 1 T C - ScafM SNP 0006.scaffold00022 28148 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 28201 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 28203 1 A T scaffold7389 Both SNP 0006.scaffold00022 28510 1 A G scaffold7389 ReadM SNP 0006.scaffold00022 28700 1 T C - ReadM SNP 0006.scaffold00022 28807 1 A T - ReadM SNP 0006.scaffold00022 28857 1 G T - ReadM SNP 0006.scaffold00022 28997 1 C T - ReadM INDEL 0006.scaffold00022 29023 1 . A - ReadM SNP 0006.scaffold00022 29147 1 C T - ReadM SNP 0006.scaffold00022 29317 1 T C - ReadM SNP 0006.scaffold00022 29378 1 T C - ReadM SNP 0006.scaffold00022 29421 1 C T - ReadM INDEL 0006.scaffold00022 29547 1 G . - ReadM SNP 0006.scaffold00022 29697 1 C G - ReadM SNP 0006.scaffold00022 29713 1 G A - ReadM SNP 0006.scaffold00022 29738 1 C T - ScafM SNP 0006.scaffold00022 30403 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 30411 3 AAG ... scaffold7389 ScafM SNP 0006.scaffold00022 30431 1 G A scaffold7389 Both SNP 0006.scaffold00022 30522 1 T C scaffold7389 Both SNP 0006.scaffold00022 30537 1 T A scaffold7389 Both SNP 0006.scaffold00022 30546 1 G T scaffold7389 ScafM INDEL 0006.scaffold00022 30576 1 . G scaffold7389 ScafM INDEL 0006.scaffold00022 30580 1 . G scaffold7389 ScafM INDEL 0006.scaffold00022 30586 1 T . scaffold7389 ScafM SNP 0006.scaffold00022 30592 1 C A scaffold7389 Both SNP 0006.scaffold00022 30666 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 30741 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 30779 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 30789 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 30824 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 30831 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 30834 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 30837 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 30853 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 30860 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 30865 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 31017 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 31044 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 31046 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 31049 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 31075 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 31077 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 31084 2 TG .. scaffold7389 ScafM SNP 0006.scaffold00022 31478 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 31502 1 C A scaffold7389 ScafM INDEL 0006.scaffold00022 31516 1 . T scaffold7389 ScafM SNP 0006.scaffold00022 31521 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 31523 2 AC GA scaffold7389 ScafM SNP 0006.scaffold00022 31526 1 C A scaffold7389 ScafM INDEL 0006.scaffold00022 31532 4 .GTC AAAT scaffold7389 ScafM SNP 0006.scaffold00022 31538 1 G C scaffold7389 ScafM INDEL 0006.scaffold00022 31540 1 . C scaffold7389 ScafM SNP 0006.scaffold00022 31542 1 T C scaffold7389 ScafM INDEL 0006.scaffold00022 31544 2 .G TT scaffold7389 ScafM SNP 0006.scaffold00022 31547 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 31550 2 .. GG scaffold7389 ScafM SNP 0006.scaffold00022 31552 1 T A scaffold7389 ScafM INDEL 0006.scaffold00022 31555 4 .... TTAG scaffold7389 ScafM INDEL 0006.scaffold00022 31556 1 . T scaffold7389 ScafM SNP 0006.scaffold00022 31559 2 GC AG scaffold7389 ScafM INDEL 0006.scaffold00022 31589 7 AATTCTA ....... scaffold7389 ScafM SNP 0006.scaffold00022 31648 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 31673 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 31675 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 31697 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 31710 1 T A scaffold7389 ScafM INDEL 0006.scaffold00022 31726 5 TGTTA ..... scaffold7389 ScafM SNP 0006.scaffold00022 31773 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 31830 1 . T scaffold7389 ScafM SNP 0006.scaffold00022 31884 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 31898 1 G A scaffold7389 ScafM INDEL 0006.scaffold00022 31964 1 . T scaffold7389 ScafM INDEL 0006.scaffold00022 31970 1 T . scaffold7389 ScafM SNP 0006.scaffold00022 32020 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 32042 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 32051 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 32479 1 A C scaffold7389 ScafM SNP 0006.scaffold00022 32482 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 32517 2 CC AT scaffold7389 ScafM SNP 0006.scaffold00022 32520 1 C T scaffold7389 Both SNP 0006.scaffold00022 32556 1 C A scaffold7389 Both SNP 0006.scaffold00022 32611 1 T C scaffold7389 Both SNP 0006.scaffold00022 32725 1 A G scaffold7389 Both SNP 0006.scaffold00022 32749 1 G A scaffold7389 Both SNP 0006.scaffold00022 32788 1 T C scaffold7389 Both SNP 0006.scaffold00022 32811 1 G T scaffold7389 Both SNP 0006.scaffold00022 32835 1 C T scaffold7389 Both SNP 0006.scaffold00022 32880 1 A G scaffold7389 Both SNP 0006.scaffold00022 32904 1 C T scaffold7389 Both SNP 0006.scaffold00022 32962 1 A C scaffold7389 Both SNP 0006.scaffold00022 33045 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 33067 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 33069 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 33073 1 G A scaffold7389 ScafM INDEL 0006.scaffold00022 33076 1 . T scaffold7389 ScafM SNP 0006.scaffold00022 33131 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 33143 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 33148 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 33192 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 33207 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 33210 1 G A scaffold7389 Both SNP 0006.scaffold00022 33247 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 33386 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 33388 1 C T scaffold7389 Both SNP 0006.scaffold00022 33411 1 G A scaffold7389 Both SNP 0006.scaffold00022 33588 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 33611 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 33621 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 33635 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 33638 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 33685 1 G A scaffold7389 ScafM INDEL 0006.scaffold00022 33705 1 G . scaffold7389 ScafM SNP 0006.scaffold00022 33709 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 33721 1 A C scaffold7389 ScafM SNP 0006.scaffold00022 33725 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 33760 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 33768 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 33774 1 G C scaffold7389 ScafM SNP 0006.scaffold00022 33832 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 33836 1 G T scaffold7389 ScafM INDEL 0006.scaffold00022 33844 1 A . scaffold7389 ScafM SNP 0006.scaffold00022 33877 1 C G scaffold7389 ScafM SNP 0006.scaffold00022 33904 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 33914 1 G A scaffold7389 ScafM INDEL 0006.scaffold00022 33954 7 TTGAGCA ....... scaffold7389 ScafM INDEL 0006.scaffold00022 33962 1 T . scaffold7389 ScafM SNP 0006.scaffold00022 34004 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 34008 1 . A scaffold7389 ScafM INDEL 0006.scaffold00022 34014 1 . C scaffold7389 ScafM INDEL 0006.scaffold00022 34015 1 . G scaffold7389 ScafM SNP 0006.scaffold00022 34021 1 G T scaffold7389 ScafM INDEL 0006.scaffold00022 34055 1 A . scaffold7389 ScafM SNP 0006.scaffold00022 34065 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 37350 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 37353 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 37355 1 G T scaffold7389 ScafM INDEL 0006.scaffold00022 37370 1 A . scaffold7389 ScafM SNP 0006.scaffold00022 37373 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 37382 1 G C scaffold7389 ScafM SNP 0006.scaffold00022 37417 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 37437 1 T A scaffold7389 ScafM INDEL 0006.scaffold00022 37453 4 .... TAAT scaffold7389 ScafM SNP 0006.scaffold00022 37457 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 37469 7 ....... ATCAGCC scaffold7389 ScafM SNP 0006.scaffold00022 37484 1 C G scaffold7389 ScafM INDEL 0006.scaffold00022 37544 2 .. TT scaffold7389 ScafM SNP 0006.scaffold00022 37581 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 37620 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 37647 2 CT TC scaffold7389 Both SNP 0006.scaffold00022 37739 1 T G scaffold7389 Both SNP 0006.scaffold00022 37765 1 T G scaffold7389 Both SNP 0006.scaffold00022 37826 1 G A scaffold7389 Both SNP 0006.scaffold00022 37843 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 37874 1 T C scaffold7389 Both SNP 0006.scaffold00022 37897 1 G A scaffold7389 Both SNP 0006.scaffold00022 37928 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 37957 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 37960 1 T A scaffold7389 Both SNP 0006.scaffold00022 38066 1 A C scaffold7389 Both SNP 0006.scaffold00022 38172 1 G C scaffold7389 ScafM SNP 0006.scaffold00022 38223 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 38226 1 T C scaffold7389 Both SNP 0006.scaffold00022 38262 1 T A scaffold7389 Both SNP 0006.scaffold00022 38334 1 G A scaffold7389 Both SNP 0006.scaffold00022 38384 1 C T scaffold7389 Both SNP 0006.scaffold00022 38570 1 A C scaffold7389 ScafM SNP 0006.scaffold00022 38627 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 38630 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 38656 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 38666 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 38674 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 38695 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 38704 1 A G scaffold7389 ScafM INDEL 0006.scaffold00022 38708 2 .. TT scaffold7389 ScafM SNP 0006.scaffold00022 38799 1 C T scaffold7389 ScafM INDEL 0006.scaffold00022 38816 22 ...................... TTTTTGTCTGTGAACTTGGTTG scaffold7389 ScafM INDEL 0006.scaffold00022 38817 8 ........ TAGTATAA scaffold7389 ScafM INDEL 0006.scaffold00022 38820 3 ... AAC scaffold7389 ScafM INDEL 0006.scaffold00022 38822 3 ... AAT scaffold7389 ScafM SNP 0006.scaffold00022 38837 1 G C scaffold7389 ScafM SNP 0006.scaffold00022 38850 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 38864 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 38873 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 38912 1 A G scaffold7389 Both SNP 0006.scaffold00022 38940 1 T A scaffold7389 Both SNP 0006.scaffold00022 38943 1 T C scaffold7389 Both SNP 0006.scaffold00022 39081 1 A G scaffold7389 Both INDEL 0006.scaffold00022 39142 2 .. TA scaffold7389 Both SNP 0006.scaffold00022 39201 1 C T scaffold7389 Both SNP 0006.scaffold00022 39277 1 C A scaffold7389 Both SNP 0006.scaffold00022 39304 1 C A scaffold7389 Both SNP 0006.scaffold00022 39321 1 G A scaffold7389 Both SNP 0006.scaffold00022 39382 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 39419 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 39423 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 39425 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 39429 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 39444 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 39461 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 39495 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 39497 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 39539 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 39567 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 39586 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 39590 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 39601 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 39612 2 TC AT scaffold7389 Both SNP 0006.scaffold00022 39713 1 T G scaffold7389 Both SNP 0006.scaffold00022 39778 1 G C scaffold7389 ScafM INDEL 0006.scaffold00022 39798 3 ... ACT scaffold7389 Both SNP 0006.scaffold00022 39810 1 C A scaffold7389 Both SNP 0006.scaffold00022 39901 1 T G scaffold7389 Both SNP 0006.scaffold00022 39910 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 40006 2 CT TC scaffold7389 ScafM SNP 0006.scaffold00022 40040 1 G C scaffold7389 ScafM INDEL 0006.scaffold00022 40053 6 ...... TAGATT scaffold7389 ScafM SNP 0006.scaffold00022 40062 1 G T scaffold7389 Both SNP 0006.scaffold00022 40203 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 40235 1 A T scaffold7389 ScafM INDEL 0006.scaffold00022 40245 1 . A scaffold7389 ScafM SNP 0006.scaffold00022 40250 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 40278 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 40322 1 G C scaffold7389 ScafM SNP 0006.scaffold00022 40334 1 A G scaffold7389 Both SNP 0006.scaffold00022 40341 1 T G scaffold7389 Both SNP 0006.scaffold00022 40385 1 C G scaffold7389 Both SNP 0006.scaffold00022 40581 1 G A scaffold7389 Both SNP 0006.scaffold00022 40590 1 T G scaffold7389 Both SNP 0006.scaffold00022 40614 1 C A scaffold7389 Both SNP 0006.scaffold00022 40619 1 T A scaffold7389 Both SNP 0006.scaffold00022 40722 1 A G scaffold7389 Both SNP 0006.scaffold00022 40849 1 A G scaffold7389 ReadM SNP 0006.scaffold00022 40894 1 A G - ReadM SNP 0006.scaffold00022 40973 1 A C - ReadM INDEL 0006.scaffold00022 40993 1 T . - ReadM SNP 0006.scaffold00022 41003 1 A G - ScafM SNP 0006.scaffold00022 41138 1 A G scaffold7389 Both SNP 0006.scaffold00022 41185 1 C T scaffold7389 Both SNP 0006.scaffold00022 41274 1 T A scaffold7389 Both SNP 0006.scaffold00022 41315 1 G A scaffold7389 Both SNP 0006.scaffold00022 41368 1 G A scaffold7389 Both SNP 0006.scaffold00022 41404 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 41453 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 41481 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 41501 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 41546 1 T C scaffold7389 ScafM INDEL 0006.scaffold00022 41581 8 ........ CTTAAGCA scaffold7389 ScafM SNP 0006.scaffold00022 41629 1 G A scaffold7389 Both INDEL 0006.scaffold00022 41662 1 . A scaffold7389 ScafM SNP 0006.scaffold00022 41753 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 41919 2 AC TT scaffold7389 ScafM SNP 0006.scaffold00022 41922 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 41931 1 T C scaffold7389 ScafM INDEL 0006.scaffold00022 41984 4 .... TATA scaffold7389 ScafM SNP 0006.scaffold00022 41995 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 42048 2 AA GG scaffold7389 ScafM SNP 0006.scaffold00022 42091 2 GC AA scaffold7389 ScafM SNP 0006.scaffold00022 42145 1 T C scaffold7389 ScafM INDEL 0006.scaffold00022 42186 1 T . scaffold7389 ScafM SNP 0006.scaffold00022 42198 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 42202 1 C T scaffold7389 ReadM SNP 0006.scaffold00022 42420 1 T C - ReadM SNP 0006.scaffold00022 42442 1 A G - ReadM SNP 0006.scaffold00022 43319 1 A G - ReadM SNP 0006.scaffold00022 43449 1 A G - ReadM SNP 0006.scaffold00022 43509 1 C T - ReadM SNP 0006.scaffold00022 43513 1 A G - ReadM SNP 0006.scaffold00022 43577 1 C G - ReadM INDEL 0006.scaffold00022 43593 1 C . - ReadM SNP 0006.scaffold00022 43670 1 C G - ReadM SNP 0006.scaffold00022 43682 1 A G - ReadM INDEL 0006.scaffold00022 43794 1 . A - Both SNP 0006.scaffold00022 43936 1 G A scaffold7389 Both SNP 0006.scaffold00022 43970 1 T C scaffold7389 Both SNP 0006.scaffold00022 44034 1 C T scaffold7389 Both SNP 0006.scaffold00022 44096 1 A C scaffold7389 Both SNP 0006.scaffold00022 44143 1 G A scaffold7389 Both SNP 0006.scaffold00022 44153 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 44175 1 C A scaffold7389 Both SNP 0006.scaffold00022 44274 2 TT CC scaffold7389 Both SNP 0006.scaffold00022 44281 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 46610 1 G T scaffold7389 ScafM SNP 0006.scaffold00022 46625 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 46641 1 T A scaffold7389 ScafM INDEL 0006.scaffold00022 46642 1 . A scaffold7389 ScafM SNP 0006.scaffold00022 46839 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 46888 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 46895 1 G A scaffold7389 ScafM SNP 0006.scaffold00022 47063 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 47087 1 A T scaffold7389 ScafM SNP 0006.scaffold00022 47090 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 47111 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 47114 1 T G scaffold7389 ScafM INDEL 0006.scaffold00022 47119 1 G . scaffold7389 Both SNP 0006.scaffold00022 47390 1 A G scaffold7389 Both SNP 0006.scaffold00022 47573 1 A C scaffold7389 Both INDEL 0006.scaffold00022 47697 1 . T scaffold7389 ScafM SNP 0006.scaffold00022 47717 1 T C scaffold7389 ScafM INDEL 0006.scaffold00022 47760 13 CATACATTCAACA ............. scaffold7389 ScafM SNP 0006.scaffold00022 47777 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 47884 1 C T scaffold7389 ScafM SNP 0006.scaffold00022 48000 1 A C scaffold7389 ReadM SNP 0006.scaffold00022 48370 1 A G - ReadM SNP 0006.scaffold00022 48520 1 A T - ReadM SNP 0006.scaffold00022 48659 1 T A - ScafM SNP 0006.scaffold00022 48847 1 C A scaffold7389 ScafM SNP 0006.scaffold00022 48857 1 C T scaffold7389 Both SNP 0006.scaffold00022 49241 1 T C scaffold7389 Both SNP 0006.scaffold00022 49283 1 T A scaffold7389 ScafM SNP 0006.scaffold00022 49310 1 A G scaffold7389 ScafM SNP 0006.scaffold00022 49384 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 49399 1 A G scaffold7389 ScafM INDEL 0006.scaffold00022 49426 1 T . scaffold7389 ScafM SNP 0006.scaffold00022 49430 1 C G scaffold7389 ScafM SNP 0006.scaffold00022 49438 1 T G scaffold7389 ScafM SNP 0006.scaffold00022 49442 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 49445 1 T C scaffold7389 ScafM SNP 0006.scaffold00022 49565 1 C A scaffold2008 ScafM SNP 0006.scaffold00022 49591 1 A C scaffold2008 ScafM SNP 0006.scaffold00022 49632 1 G A scaffold2008 ScafM SNP 0006.scaffold00022 49650 1 A T scaffold2008 ScafM SNP 0006.scaffold00022 49666 1 G A scaffold2008 ScafM SNP 0006.scaffold00022 49725 1 C A scaffold2008 ReadM SNP 0006.scaffold00022 49995 1 G T - ReadM SNP 0006.scaffold00022 50152 1 A T - ScafM SNP 0006.scaffold00022 50426 1 A G scaffold2008 ReadM SNP 0007.scaffold00024 7152 1 G A - ScafM SNP 0007.scaffold00024 11978 1 C G scaffold837 ScafM SNP 0007.scaffold00024 11993 3 ACC GTT scaffold837 ScafM SNP 0007.scaffold00024 12020 1 A C scaffold837 ScafM SNP 0007.scaffold00024 12042 1 C T scaffold837 ScafM SNP 0007.scaffold00024 14684 1 A C scaffold1444 ScafM SNP 0007.scaffold00024 34113 2 AG CA scaffold9754 ScafM SNP 0007.scaffold00024 45476 1 A G scaffold7273 ScafM SNP 0007.scaffold00024 45482 1 G A scaffold7273 ScafM SNP 0007.scaffold00024 45485 1 G T scaffold7273 ScafM SNP 0007.scaffold00024 45488 1 T C scaffold7273 ScafM INDEL 0007.scaffold00024 45529 3 ACA ... scaffold7273 ScafM SNP 0007.scaffold00024 45535 1 T C scaffold7273 ScafM SNP 0007.scaffold00024 45538 1 T G scaffold7273 ScafM SNP 0007.scaffold00024 45550 2 AC CT scaffold7273 ScafM INDEL 0007.scaffold00024 45558 1 . A scaffold7273 ScafM SNP 0007.scaffold00024 45586 1 A C scaffold7273 ScafM INDEL 0007.scaffold00024 46252 1 . A scaffold14330 ScafM SNP 0007.scaffold00024 63588 1 A G scaffold14330 ReadM SNP 0007.scaffold00024 71294 1 T C - ReadM SNP 0007.scaffold00024 71477 1 C T - ReadM SNP 0007.scaffold00024 71568 1 T C - ScafM INDEL 0007.scaffold00024 115499 7 ....... CGCCCTC scaffold10162 ScafM SNP 0007.scaffold00024 128797 1 T C scaffold2898 ScafM INDEL 0007.scaffold00024 146023 1 . T scaffold2898 ScafM SNP 0007.scaffold00024 168105 1 A G scaffold17990 ScafM SNP 0007.scaffold00024 168191 1 A G scaffold17990 ScafM INDEL 0007.scaffold00024 188209 1 . G scaffold17990 ReadM SNP 0007.scaffold00024 191545 1 T C - ReadM SNP 0007.scaffold00024 191554 1 T C - ScafM SNP 0007.scaffold00024 198205 1 C T scaffold17990 ScafM INDEL 0007.scaffold00024 227828 2 .. AA scaffold8501 ScafM INDEL 0007.scaffold00024 228601 9 ......... ATTGGGACA scaffold8501 ScafM INDEL 0007.scaffold00024 235129 1 . C scaffold8501 ScafM INDEL 0007.scaffold00024 237385 1 C . scaffold8501 ScafM INDEL 0007.scaffold00024 237398 1 A . scaffold8501 ScafM SNP 0007.scaffold00024 269038 1 G A scaffold8501 ScafM SNP 0007.scaffold00024 269040 1 C T scaffold8501 ScafM SNP 0007.scaffold00024 269641 1 A G scaffold8501 ScafM SNP 0007.scaffold00024 269681 1 G A scaffold8501 ScafM SNP 0007.scaffold00024 270593 1 T G scaffold4088 ScafM SNP 0007.scaffold00024 270619 1 G T scaffold4088 ScafM SNP 0007.scaffold00024 270697 1 C T scaffold4088 ScafM INDEL 0007.scaffold00024 291458 52 TCTTCTCTCCTGCTTCCCCTCCACCGTCTTCCTCCCTTGCCCACCCCTGCTC .................................................... scaffold8501 ScafM INDEL 0007.scaffold00024 292119 1 . T scaffold8501 ScafM INDEL 0007.scaffold00024 292121 1 . G scaffold8501 ScafM INDEL 0007.scaffold00024 292146 1 . G scaffold8501 ScafM SNP 0007.scaffold00024 292161 2 AG GA scaffold8501 ScafM INDEL 0007.scaffold00024 293099 16 ................ CAACCCCCCCCCCCCC scaffold8501 ScafM INDEL 0007.scaffold00024 305621 2 .. TA scaffold8501 ScafM SNP 0007.scaffold00024 305646 1 A T scaffold8501 ScafM SNP 0007.scaffold00024 362385 1 T A scaffold16064 ScafM SNP 0007.scaffold00024 380906 1 A G scaffold6862 ScafM SNP 0007.scaffold00024 381094 2 TG CA scaffold6862 ScafM SNP 0007.scaffold00024 391133 1 G C scaffold772 ScafM INDEL 0007.scaffold00024 408704 1 . A scaffold6862 ScafM INDEL 0007.scaffold00024 442337 1 . A scaffold7085 ScafM INDEL 0007.scaffold00024 442342 3 TCC ... scaffold7085 ScafM SNP 0007.scaffold00024 442347 2 TT AA scaffold7085 ScafM SNP 0007.scaffold00024 442365 1 G T scaffold7085 ScafM SNP 0007.scaffold00024 442367 1 A C scaffold7085 ScafM SNP 0007.scaffold00024 442369 2 AT TA scaffold7085 ScafM INDEL 0007.scaffold00024 442375 2 .. TT scaffold7085 ScafM INDEL 0007.scaffold00024 442412 1 . A scaffold7085 ScafM INDEL 0007.scaffold00024 442415 7 ....... AGAAAAC scaffold7085 ScafM INDEL 0007.scaffold00024 442486 1 G . scaffold7085 ScafM INDEL 0007.scaffold00024 442513 13 ............. TTTCTAAATCTTT scaffold7085 ScafM INDEL 0007.scaffold00024 442514 1 . A scaffold7085 ScafM INDEL 0007.scaffold00024 442517 1 . T scaffold7085 ScafM INDEL 0007.scaffold00024 442531 8 ........ TTAAATCT scaffold7085 ScafM INDEL 0007.scaffold00024 442534 3 ... ATT scaffold7085 ScafM INDEL 0007.scaffold00024 442537 4 .... CCAC scaffold7085 ScafM SNP 0007.scaffold00024 442580 1 T C scaffold7085 ScafM SNP 0007.scaffold00024 442638 1 T C scaffold7085 ScafM INDEL 0007.scaffold00024 442643 1 . C scaffold7085 ScafM SNP 0007.scaffold00024 442716 1 C T scaffold7085 ScafM SNP 0007.scaffold00024 442742 1 G C scaffold7085 ScafM INDEL 0007.scaffold00024 442763 1 . G scaffold7085 ScafM SNP 0007.scaffold00024 442772 1 T A scaffold7085 ScafM SNP 0007.scaffold00024 442811 1 G T scaffold7085 ScafM SNP 0007.scaffold00024 442813 1 G C scaffold7085 ScafM INDEL 0007.scaffold00024 442835 1 T . scaffold7085 ScafM SNP 0007.scaffold00024 442860 1 C A scaffold7085 ScafM SNP 0007.scaffold00024 442866 1 A C scaffold7085 ScafM SNP 0007.scaffold00024 442902 1 C G scaffold7085 ScafM SNP 0007.scaffold00024 442906 1 A G scaffold7085 ScafM INDEL 0007.scaffold00024 442936 4 .... TGCA scaffold7085 ScafM SNP 0007.scaffold00024 442951 1 T C scaffold7085 ScafM SNP 0007.scaffold00024 442965 1 G A scaffold7085 ScafM INDEL 0007.scaffold00024 443073 33 AAATTCAATCAAATTGAAACAAGACAAACCTCC ................................. scaffold7085 ScafM SNP 0007.scaffold00024 443113 1 C A scaffold7085 Both SNP 0007.scaffold00024 445090 1 A G scaffold26418 ScafM SNP 0007.scaffold00024 466228 1 C T scaffold6482 ScafM INDEL 0007.scaffold00024 531008 1 A . scaffold16202 ScafM SNP 0007.scaffold00024 557839 1 A C scaffold26275 ReadM SNP 0007.scaffold00024 564911 1 G C - ScafM SNP 0007.scaffold00024 572792 1 T C scaffold2991 ScafM SNP 0007.scaffold00024 572814 1 T C scaffold2991 ScafM INDEL 0007.scaffold00024 608389 1 . A scaffold2753 ScafM SNP 0007.scaffold00024 609498 1 T G scaffold2753 ScafM SNP 0007.scaffold00024 609544 1 T G scaffold2753 ScafM INDEL 0007.scaffold00024 609650 10 .......... CTGATAAAGG scaffold2753 ScafM SNP 0007.scaffold00024 609689 1 G T scaffold2753 ScafM INDEL 0007.scaffold00024 609701 3 ... TCG scaffold2753 ScafM SNP 0007.scaffold00024 609743 1 G A scaffold2753 ScafM SNP 0007.scaffold00024 609748 1 C G scaffold2753 ScafM SNP 0007.scaffold00024 609763 1 G A scaffold2753 ScafM SNP 0007.scaffold00024 609783 1 G A scaffold2753 ScafM INDEL 0007.scaffold00024 609914 7 TCCCCAA ....... scaffold2753 Both SNP 0007.scaffold00024 609943 1 T A scaffold2753 ScafM INDEL 0007.scaffold00024 637098 5 ..... CCCCC scaffold6225 ScafM INDEL 0007.scaffold00024 642516 1 A . scaffold6225 ScafM SNP 0007.scaffold00024 642639 1 T A scaffold6225 Both SNP 0007.scaffold00024 647093 1 A G scaffold2022 ScafM SNP 0007.scaffold00024 647169 1 T G scaffold2022 Both SNP 0007.scaffold00024 647258 1 C T scaffold2022 ScafM INDEL 0007.scaffold00024 656526 2 .. AA scaffold2022 Both INDEL 0007.scaffold00024 664437 1 . T scaffold2022 ScafM INDEL 0007.scaffold00024 669191 1 . T scaffold2022 ScafM SNP 0007.scaffold00024 675800 1 C A scaffold8402 ScafM SNP 0007.scaffold00024 675813 1 A G scaffold8402 ScafM INDEL 0007.scaffold00024 675871 1 . T scaffold8402 ScafM SNP 0007.scaffold00024 675874 1 C T scaffold8402 ScafM SNP 0007.scaffold00024 675876 1 A C scaffold8402 ScafM SNP 0007.scaffold00024 675895 1 A G scaffold8402 ScafM INDEL 0007.scaffold00024 675939 2 TC .. scaffold8402 ScafM SNP 0007.scaffold00024 675962 1 G T scaffold8402 ScafM SNP 0007.scaffold00024 675980 1 G A scaffold8402 ScafM SNP 0007.scaffold00024 675989 1 G A scaffold8402 ScafM SNP 0007.scaffold00024 676003 1 T C scaffold8402 ScafM SNP 0007.scaffold00024 676057 1 T A scaffold8402 ScafM INDEL 0007.scaffold00024 676088 1 . A scaffold8402 ScafM SNP 0007.scaffold00024 676107 1 G C scaffold8402 ScafM SNP 0007.scaffold00024 676109 1 T C scaffold8402 ScafM SNP 0007.scaffold00024 676118 1 G A scaffold8402 ScafM SNP 0007.scaffold00024 676158 1 T G scaffold8402 ScafM SNP 0007.scaffold00024 676161 1 C T scaffold8402 ScafM SNP 0007.scaffold00024 676171 1 C A scaffold8402 ScafM SNP 0007.scaffold00024 676183 1 A G scaffold8402 ReadM INDEL 0007.scaffold00024 687866 1 . A - ScafM SNP 0007.scaffold00024 736672 1 A G scaffold25424 ScafM SNP 0007.scaffold00024 737272 1 C T scaffold28898 ScafM INDEL 0007.scaffold00024 737309 3 AAT ... scaffold28898 ScafM SNP 0007.scaffold00024 737316 1 A G scaffold28898 ScafM SNP 0007.scaffold00024 737352 1 C T scaffold28898 ScafM INDEL 0007.scaffold00024 737357 4 .... ATAT scaffold28898 ScafM SNP 0007.scaffold00024 742407 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 742439 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 742441 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 742627 1 T G scaffold8496 ScafM SNP 0007.scaffold00024 742669 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 742680 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 742698 1 T C scaffold8496 ScafM SNP 0007.scaffold00024 742724 1 G A scaffold8496 ScafM SNP 0007.scaffold00024 742736 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 742749 1 G A scaffold8496 ScafM SNP 0007.scaffold00024 742830 1 T A scaffold8496 ScafM SNP 0007.scaffold00024 742866 1 G A scaffold8496 ScafM SNP 0007.scaffold00024 742920 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 742944 1 T C scaffold8496 ScafM SNP 0007.scaffold00024 742998 1 A C scaffold8496 ScafM SNP 0007.scaffold00024 743007 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 743037 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 743040 1 A T scaffold8496 ScafM SNP 0007.scaffold00024 743046 1 G T scaffold8496 ScafM SNP 0007.scaffold00024 743082 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 743128 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 743147 1 G C scaffold8496 ScafM SNP 0007.scaffold00024 743199 1 A C scaffold8496 ScafM SNP 0007.scaffold00024 743251 1 A T scaffold8496 ScafM SNP 0007.scaffold00024 743345 1 T C scaffold8496 ScafM SNP 0007.scaffold00024 743400 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 743403 1 T C scaffold8496 ScafM SNP 0007.scaffold00024 743433 1 T G scaffold8496 ScafM SNP 0007.scaffold00024 743436 1 G A scaffold8496 ScafM SNP 0007.scaffold00024 743477 1 A T scaffold8496 ScafM SNP 0007.scaffold00024 743496 1 A G scaffold8496 ScafM SNP 0007.scaffold00024 743499 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 743750 1 C T scaffold8496 ScafM SNP 0007.scaffold00024 743995 2 AA GT scaffold8496 ReadM INDEL 0007.scaffold00024 769620 1 C . - ReadM SNP 0007.scaffold00024 773794 1 A T - ScafM INDEL 0007.scaffold00024 777737 1 . A scaffold9455 ReadM SNP 0007.scaffold00024 789962 1 G A - ScafM SNP 0007.scaffold00024 804145 2 GG TA scaffold2774 ScafM SNP 0007.scaffold00024 804158 1 G A scaffold2774 ReadM INDEL 0007.scaffold00024 804282 1 A . - ScafM INDEL 0007.scaffold00024 805128 2 AA .. scaffold2774 ReadM INDEL 0007.scaffold00024 813082 1 T . - ReadM SNP 0007.scaffold00024 813121 1 C A - ReadM SNP 0007.scaffold00024 813127 1 C G - ReadM SNP 0007.scaffold00024 813175 1 A G - ReadM SNP 0007.scaffold00024 813226 1 G A - ReadM INDEL 0007.scaffold00024 814859 1 . G - ReadM SNP 0007.scaffold00024 814876 1 C T - ScafM SNP 0007.scaffold00024 816867 1 C G scaffold2774 ScafM SNP 0007.scaffold00024 816883 1 A G scaffold2774 ScafM INDEL 0007.scaffold00024 816954 1 . T scaffold2774 ReadM SNP 0007.scaffold00024 832187 1 A G - ScafM SNP 0007.scaffold00024 842551 1 G T scaffold2774 ScafM SNP 0007.scaffold00024 842654 1 G T scaffold2774 ScafM SNP 0007.scaffold00024 844999 1 T C scaffold2774 ScafM SNP 0007.scaffold00024 847599 1 G T scaffold2774 ScafM SNP 0007.scaffold00024 847686 1 A G scaffold2774 ScafM SNP 0007.scaffold00024 847689 1 G C scaffold2774 ScafM SNP 0007.scaffold00024 876971 1 G T scaffold2774 ScafM INDEL 0007.scaffold00024 885844 1 . T scaffold2774 ScafM INDEL 0007.scaffold00024 892034 8 ........ AAAAAAAA scaffold2774 ScafM INDEL 0007.scaffold00024 892058 10 .......... AAAAAAAAAA scaffold2774 ScafM INDEL 0007.scaffold00024 896000 1 . T scaffold2774 ScafM INDEL 0007.scaffold00024 941905 43 ........................................... TGGGGGGGGGGGGGAAGTTTTTTTTTTTTTTTTTTTTTTTTTG scaffold7408 ReadM INDEL 0007.scaffold00024 1014623 1 . T - ScafM INDEL 0007.scaffold00024 1016544 27 ........................... CTTTTTTTTTTTTTTTTTTTTTTCTTA scaffold2132 ScafM INDEL 0007.scaffold00024 1041843 1 C . scaffold2132 ScafM SNP 0007.scaffold00024 1043289 1 A G scaffold2132 ScafM SNP 0007.scaffold00024 1043292 2 AC GT scaffold2132 ScafM SNP 0007.scaffold00024 1043310 2 GT AC scaffold2132 ScafM INDEL 0007.scaffold00024 1043400 1 G . scaffold2132 ScafM SNP 0007.scaffold00024 1043402 1 T G scaffold2132 ReadM SNP 0007.scaffold00024 1060662 1 G T - ScafM INDEL 0007.scaffold00024 1076952 1 A . scaffold2132 ScafM INDEL 0007.scaffold00024 1077665 6 CCTGGA ...... scaffold2132 ScafM SNP 0007.scaffold00024 1077682 1 C T scaffold2132 ScafM SNP 0007.scaffold00024 1077707 1 T A scaffold2132 ScafM SNP 0007.scaffold00024 1077731 1 T C scaffold2132 ScafM SNP 0007.scaffold00024 1077749 1 T G scaffold2132 ScafM SNP 0007.scaffold00024 1077789 1 G A scaffold2132 ScafM SNP 0007.scaffold00024 1077792 1 G A scaffold2132 ScafM SNP 0007.scaffold00024 1077794 1 G A scaffold2132 ScafM SNP 0007.scaffold00024 1077803 1 A C scaffold2132 ScafM SNP 0007.scaffold00024 1077808 1 G C scaffold2132 ScafM SNP 0007.scaffold00024 1077826 1 A G scaffold2132 ScafM INDEL 0007.scaffold00024 1077843 8 TTTTTTTT .......G scaffold2132 ScafM SNP 0007.scaffold00024 1077862 2 AA GG scaffold2132 ReadM SNP 0007.scaffold00024 1097679 1 T A - ScafM SNP 0007.scaffold00024 1132291 1 T A scaffold12460 ScafM SNP 0007.scaffold00024 1132293 1 C T scaffold12460 ReadM SNP 0007.scaffold00024 1133027 1 T A - ScafM SNP 0007.scaffold00024 1133075 1 T C scaffold12460 ScafM SNP 0007.scaffold00024 1133109 1 T C scaffold12460 ScafM SNP 0007.scaffold00024 1133172 1 T C scaffold12460 ScafM INDEL 0007.scaffold00024 1148331 1 A . scaffold12460 ScafM INDEL 0007.scaffold00024 1148336 1 A . scaffold12460 ScafM SNP 0007.scaffold00024 1164693 1 A C scaffold15822 ScafM SNP 0007.scaffold00024 1164737 1 A G scaffold15822 ScafM SNP 0007.scaffold00024 1164771 1 T C scaffold15822 ScafM SNP 0007.scaffold00024 1164837 1 C T scaffold15822 ScafM INDEL 0007.scaffold00024 1164947 1 . T scaffold30888 ScafM SNP 0007.scaffold00024 1164974 1 G A scaffold30888 ScafM SNP 0007.scaffold00024 1164990 1 A G scaffold30888 ReadM SNP 0007.scaffold00024 1173191 1 G T - ScafM INDEL 0007.scaffold00024 1183148 1 . A scaffold9516 ReadM SNP 0007.scaffold00024 1196208 1 C T - ScafM INDEL 0007.scaffold00024 1198628 1 . A scaffold9516 ReadM INDEL 0007.scaffold00024 1198636 1 . T - ScafM SNP 0007.scaffold00024 1219291 1 T C scaffold267 ScafM SNP 0007.scaffold00024 1219302 1 G A scaffold267 ScafM SNP 0007.scaffold00024 1219322 1 C T scaffold267 ScafM SNP 0007.scaffold00024 1219335 1 C T scaffold267 ScafM INDEL 0007.scaffold00024 1219357 2 AA .. scaffold267 ScafM SNP 0007.scaffold00024 1219362 1 T G scaffold267 ScafM SNP 0007.scaffold00024 1219372 1 A C scaffold267 ScafM INDEL 0007.scaffold00024 1219407 7 ....... CTTCAGA scaffold267 ScafM SNP 0007.scaffold00024 1219416 1 A T scaffold267 ScafM SNP 0007.scaffold00024 1219426 1 G A scaffold267 ScafM INDEL 0007.scaffold00024 1219440 1 A . scaffold267 ScafM SNP 0007.scaffold00024 1219455 1 C G scaffold267 ScafM SNP 0007.scaffold00024 1219479 1 A G scaffold267 ScafM SNP 0007.scaffold00024 1219484 1 T C scaffold267 ScafM SNP 0007.scaffold00024 1219491 1 T G scaffold267 ScafM SNP 0007.scaffold00024 1219503 1 T A scaffold267 ScafM SNP 0007.scaffold00024 1220140 1 A C scaffold23152 ScafM SNP 0007.scaffold00024 1237635 1 G T scaffold11231 ScafM SNP 0007.scaffold00024 1237645 1 C A scaffold11231 ScafM SNP 0007.scaffold00024 1237839 1 T C scaffold11231 ScafM SNP 0007.scaffold00024 1237877 1 C A scaffold11231 ReadM INDEL 0007.scaffold00024 1294320 1 A . - ScafM INDEL 0007.scaffold00024 1304578 1 A . scaffold9365 ScafM SNP 0007.scaffold00024 1387038 1 A T scaffold12221 ScafM INDEL 0007.scaffold00024 1419200 11 ........... CTTAATGTTTT scaffold3898 ScafM SNP 0007.scaffold00024 1419792 1 T G scaffold3898 ScafM SNP 0007.scaffold00024 1420394 1 A C scaffold32768 ScafM SNP 0007.scaffold00024 1420397 1 C T scaffold32768 ScafM SNP 0007.scaffold00024 1420445 1 C T scaffold32768 ScafM SNP 0007.scaffold00024 1420483 1 A T scaffold32768 ScafM SNP 0007.scaffold00024 1460045 1 G C scaffold8009 ScafM SNP 0007.scaffold00024 1460054 1 C A scaffold8009 ScafM INDEL 0007.scaffold00024 1460060 2 .. AG scaffold8009 ScafM SNP 0007.scaffold00024 1460079 1 T A scaffold8009 ScafM SNP 0007.scaffold00024 1460121 1 T C scaffold8009 ScafM SNP 0007.scaffold00024 1460193 1 A G scaffold8009 ScafM SNP 0007.scaffold00024 1465813 1 A G scaffold4108 ScafM SNP 0007.scaffold00024 1466713 1 C G scaffold4108 ReadM SNP 0007.scaffold00024 1466757 1 A G - ScafM INDEL 0007.scaffold00024 1490214 1 A . scaffold2027 ScafM SNP 0007.scaffold00024 1563844 1 A C scaffold18246 ScafM SNP 0007.scaffold00024 1583738 1 G A scaffold6289 ScafM SNP 0007.scaffold00024 1583740 1 A G scaffold6289 ScafM SNP 0007.scaffold00024 1583747 2 CA AG scaffold6289 ScafM SNP 0007.scaffold00024 1583773 1 G C scaffold6289 ScafM INDEL 0007.scaffold00024 1583777 3 TTT ... scaffold6289 ScafM SNP 0007.scaffold00024 1583781 2 TT GA scaffold6289 ScafM SNP 0007.scaffold00024 1583795 1 A G scaffold6289 ScafM SNP 0007.scaffold00024 1583819 1 T G scaffold6289 ScafM SNP 0007.scaffold00024 1583826 1 G A scaffold6289 ScafM SNP 0007.scaffold00024 1583833 1 G A scaffold6289 ScafM SNP 0007.scaffold00024 1583863 1 C G scaffold6289 ScafM SNP 0007.scaffold00024 1594645 1 G C scaffold1981 ScafM SNP 0007.scaffold00024 1594676 1 T C scaffold1981 ScafM INDEL 0007.scaffold00024 1596497 1 . A scaffold1981 ScafM INDEL 0007.scaffold00024 1618876 1 . T scaffold1981 ScafM SNP 0007.scaffold00024 1622212 1 A G scaffold31352 ScafM SNP 0007.scaffold00024 1623613 2 TT AC scaffold1981 ScafM INDEL 0007.scaffold00024 1629965 17 ................. GGGGGGGGGGGGGGGGG scaffold1981 ScafM INDEL 0007.scaffold00024 1678278 2 GG .. scaffold9271 ScafM INDEL 0007.scaffold00024 1678348 4 AATC .... scaffold9271 ScafM INDEL 0007.scaffold00024 1678355 2 AG .. scaffold9271 ScafM SNP 0007.scaffold00024 1678359 1 A T scaffold9271 ScafM INDEL 0007.scaffold00024 1679073 1 T . scaffold9271 ScafM INDEL 0007.scaffold00024 1679075 1 . T scaffold9271 ScafM SNP 0007.scaffold00024 1697248 1 C T scaffold693 ScafM SNP 0007.scaffold00024 1697255 1 A C scaffold693 ScafM INDEL 0007.scaffold00024 1697257 2 AC .. scaffold693 ScafM INDEL 0007.scaffold00024 1697261 1 A . scaffold693 ScafM INDEL 0007.scaffold00024 1697263 1 A . scaffold693 ScafM SNP 0007.scaffold00024 1706235 1 T G scaffold693 ScafM SNP 0007.scaffold00024 1706260 1 A G scaffold693 ScafM INDEL 0007.scaffold00024 1706262 1 A . scaffold693 ScafM INDEL 0007.scaffold00024 1706264 2 GC .. scaffold693 ScafM INDEL 0007.scaffold00024 1706268 1 C . scaffold693 ScafM SNP 0007.scaffold00024 1706281 1 A G scaffold693 ScafM SNP 0007.scaffold00024 1706307 1 G A scaffold693 ScafM SNP 0007.scaffold00024 1706309 1 T A scaffold693 ScafM SNP 0007.scaffold00024 1706313 2 CT AC scaffold693 ScafM SNP 0007.scaffold00024 1706316 1 A C scaffold693 ScafM SNP 0007.scaffold00024 1706332 1 G A scaffold693 ScafM INDEL 0007.scaffold00024 1706339 6 GTTTTC ...... scaffold693 ScafM SNP 0007.scaffold00024 1706351 1 T C scaffold693 ScafM SNP 0007.scaffold00024 1706353 1 T C scaffold693 ScafM INDEL 0007.scaffold00024 1706367 1 . C scaffold693 ScafM SNP 0007.scaffold00024 1706377 1 T G scaffold693 ScafM SNP 0007.scaffold00024 1706400 1 G A scaffold693 ScafM SNP 0007.scaffold00024 1706404 1 A T scaffold693 ScafM SNP 0007.scaffold00024 1706415 1 T C scaffold693 ScafM INDEL 0007.scaffold00024 1706418 2 TG .. scaffold693 ScafM SNP 0007.scaffold00024 1706426 1 T C scaffold693 ScafM SNP 0007.scaffold00024 1706468 1 A T scaffold693 ScafM SNP 0007.scaffold00024 1706482 1 C T scaffold693 ReadM INDEL 0007.scaffold00024 1716933 1 . A - ScafM SNP 0007.scaffold00024 1719295 1 C A scaffold693 ScafM SNP 0007.scaffold00024 1719679 1 G T scaffold693 ScafM SNP 0007.scaffold00024 1720154 1 G A scaffold8992 ScafM SNP 0007.scaffold00024 1720195 1 A C scaffold8992 ScafM SNP 0007.scaffold00024 1720217 1 C T scaffold8992 ScafM SNP 0007.scaffold00024 1720253 1 G C scaffold8992 ScafM SNP 0007.scaffold00024 1720266 1 G A scaffold8992 ScafM SNP 0007.scaffold00024 1720349 1 T C scaffold8992 ScafM SNP 0007.scaffold00024 1720355 1 G C scaffold8992 ScafM SNP 0007.scaffold00024 1720358 1 T C scaffold8992 ScafM INDEL 0007.scaffold00024 1720484 1 . C scaffold8992 ScafM SNP 0007.scaffold00024 1720490 1 A G scaffold8992 ScafM SNP 0007.scaffold00024 1720559 1 C G scaffold8992 ScafM INDEL 0007.scaffold00024 1720571 3 ... CTT scaffold8992 ScafM INDEL 0007.scaffold00024 1720595 11 GTTTTTTTTTT ........... scaffold8992 ScafM SNP 0007.scaffold00024 1720643 1 C T scaffold8992 ScafM SNP 0007.scaffold00024 1720736 1 C T scaffold8992 ScafM SNP 0007.scaffold00024 1720972 1 G T scaffold41061 ScafM SNP 0007.scaffold00024 1721000 1 G C scaffold41061 ScafM INDEL 0007.scaffold00024 1721010 1 T . scaffold41061 ScafM SNP 0007.scaffold00024 1721014 1 G A scaffold41061 ScafM SNP 0007.scaffold00024 1721045 1 A C scaffold41061 ScafM SNP 0007.scaffold00024 1721056 1 A G scaffold41061 ScafM SNP 0007.scaffold00024 1721063 1 T G scaffold41061 ScafM SNP 0007.scaffold00024 1721687 1 T A scaffold41061 ScafM SNP 0007.scaffold00024 1721733 1 C G scaffold41061 ScafM SNP 0007.scaffold00024 1721742 1 T G scaffold41061 ScafM SNP 0007.scaffold00024 1721809 1 A T scaffold41061 ScafM INDEL 0007.scaffold00024 1721811 4 AGCT .... scaffold41061 ScafM SNP 0007.scaffold00024 1721816 3 CTT AAG scaffold41061 ScafM INDEL 0007.scaffold00024 1721821 3 CAC ... scaffold41061 ScafM SNP 0007.scaffold00024 1721825 1 T G scaffold41061 ScafM SNP 0007.scaffold00024 1721851 1 A G scaffold41061 ScafM SNP 0007.scaffold00024 1721855 1 G A scaffold41061 ScafM SNP 0007.scaffold00024 1721860 1 A G scaffold41061 ScafM INDEL 0007.scaffold00024 1721868 1 T . scaffold41061 ScafM INDEL 0007.scaffold00024 1733335 1 . T scaffold2087 ScafM SNP 0007.scaffold00024 1752156 1 G T scaffold2087 ScafM INDEL 0007.scaffold00024 1754093 6 TATCAT ...... scaffold16371 ScafM SNP 0007.scaffold00024 1754112 1 T C scaffold16371 ScafM SNP 0007.scaffold00024 1754183 1 T C scaffold16371 ScafM SNP 0007.scaffold00024 1754211 1 T A scaffold16371 ScafM SNP 0007.scaffold00024 1754347 1 G C scaffold16371 ScafM SNP 0007.scaffold00024 1767482 1 A G scaffold10186 ScafM SNP 0007.scaffold00024 1767509 1 A G scaffold10186 ScafM SNP 0007.scaffold00024 1768311 1 C T scaffold5010 ScafM SNP 0007.scaffold00024 1768348 1 A T scaffold5010 ScafM SNP 0007.scaffold00024 1768350 1 A G scaffold5010 ScafM SNP 0007.scaffold00024 1792189 1 A G scaffold3303 ScafM SNP 0007.scaffold00024 1792816 1 A G scaffold3303 ScafM SNP 0007.scaffold00024 1794580 1 C T scaffold3303 ScafM SNP 0007.scaffold00024 1794715 1 A G scaffold3303 ScafM SNP 0007.scaffold00024 1795338 1 A C scaffold3303 ReadM SNP 0007.scaffold00024 1814805 1 C T - ReadM INDEL 0007.scaffold00024 1815362 1 . T - ScafM SNP 0007.scaffold00024 1819883 1 C A scaffold27368 ScafM SNP 0007.scaffold00024 1819958 1 G T scaffold27368 ScafM SNP 0007.scaffold00024 1819961 1 A C scaffold27368 ScafM INDEL 0007.scaffold00024 1820018 1 A . scaffold27368 ScafM SNP 0007.scaffold00024 1820021 1 A T scaffold27368 ScafM SNP 0007.scaffold00024 1820028 2 AA GC scaffold27368 ScafM SNP 0007.scaffold00024 1820054 1 A G scaffold27368 ScafM SNP 0007.scaffold00024 1820078 1 A C scaffold27368 ScafM SNP 0007.scaffold00024 1820129 1 G C scaffold27368 ScafM SNP 0007.scaffold00024 1820155 1 T C scaffold27368 ReadM INDEL 0007.scaffold00024 1834270 2 GG .. - ReadM INDEL 0007.scaffold00024 1856007 1 . A - ScafM INDEL 0007.scaffold00024 1880414 1 . A scaffold3605 ScafM INDEL 0007.scaffold00024 1880429 1 . G scaffold3605 ScafM INDEL 0007.scaffold00024 1886451 1 . G scaffold3605 ScafM INDEL 0007.scaffold00024 1899353 34 .................................. GGAACAATGTGAGTGTGGGGGGGGGGGGGGGGGG scaffold3605 ScafM INDEL 0007.scaffold00024 1899693 1 . T scaffold3605 ScafM INDEL 0007.scaffold00024 1911109 2 .. AA scaffold3605 ScafM SNP 0007.scaffold00024 1915799 1 T C scaffold24755 ScafM SNP 0007.scaffold00024 1915856 1 G C scaffold24755 ScafM SNP 0007.scaffold00024 1916154 1 A C scaffold30374 ScafM SNP 0007.scaffold00024 1918951 1 G A scaffold21933 ScafM SNP 0007.scaffold00024 1927968 1 C A scaffold4235 ScafM SNP 0007.scaffold00024 1927977 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1927980 1 T G scaffold4235 ScafM SNP 0007.scaffold00024 1927983 1 A G scaffold4235 ScafM SNP 0007.scaffold00024 1928001 1 G T scaffold4235 ScafM SNP 0007.scaffold00024 1928014 1 A G scaffold4235 ScafM SNP 0007.scaffold00024 1928023 1 A G scaffold4235 ScafM SNP 0007.scaffold00024 1928034 1 C T scaffold4235 ScafM SNP 0007.scaffold00024 1928038 1 T A scaffold4235 ScafM INDEL 0007.scaffold00024 1928044 5 TGGTA ..... scaffold4235 ScafM SNP 0007.scaffold00024 1928122 1 C A scaffold4235 ScafM SNP 0007.scaffold00024 1928184 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928188 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928195 1 C T scaffold4235 ScafM SNP 0007.scaffold00024 1928232 1 A C scaffold4235 ScafM SNP 0007.scaffold00024 1928238 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928265 1 G C scaffold4235 ScafM SNP 0007.scaffold00024 1928271 1 C G scaffold4235 ScafM SNP 0007.scaffold00024 1928273 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928293 1 C T scaffold4235 ScafM SNP 0007.scaffold00024 1928300 1 G C scaffold4235 ScafM SNP 0007.scaffold00024 1928332 2 CC TA scaffold4235 ScafM INDEL 0007.scaffold00024 1928354 1 . T scaffold4235 ScafM SNP 0007.scaffold00024 1928366 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928396 1 T A scaffold4235 ScafM SNP 0007.scaffold00024 1928400 1 A G scaffold4235 ScafM SNP 0007.scaffold00024 1928408 1 T C scaffold4235 ScafM SNP 0007.scaffold00024 1928412 1 G A scaffold4235 ScafM SNP 0007.scaffold00024 1928429 2 AA CG scaffold4235 ScafM SNP 0007.scaffold00024 1928461 1 G C scaffold4235 ScafM SNP 0007.scaffold00024 1928465 1 T C scaffold4235 Both INDEL 0007.scaffold00024 1929612 1 . A scaffold528 ScafM SNP 0007.scaffold00024 1929725 1 G A scaffold528 ScafM SNP 0007.scaffold00024 1929797 1 T A scaffold528 ScafM SNP 0007.scaffold00024 1929814 1 C T scaffold528 ScafM INDEL 0007.scaffold00024 1929827 2 .A GT scaffold528 ScafM SNP 0007.scaffold00024 1929911 1 T C scaffold528 ScafM SNP 0007.scaffold00024 1930162 1 A G scaffold528 ScafM SNP 0007.scaffold00024 1930329 1 C T scaffold528 ScafM SNP 0007.scaffold00024 1930414 1 A G scaffold528 ScafM SNP 0007.scaffold00024 1930705 1 T G scaffold528 ScafM INDEL 0007.scaffold00024 1930707 1 . G scaffold528 ScafM INDEL 0007.scaffold00024 1930791 49 ................................................. GACGACGACGAGATGTAGTCTTTACTCTAGCCATAATTTCGCAAATAAT scaffold528 ScafM SNP 0007.scaffold00024 1930962 1 T C scaffold528 ScafM SNP 0007.scaffold00024 1969409 1 C A scaffold5737 ScafM SNP 0007.scaffold00024 1969439 1 T C scaffold5737 ScafM INDEL 0007.scaffold00024 1969441 1 . T scaffold5737 ScafM SNP 0007.scaffold00024 1969448 1 T C scaffold5737 ReadM SNP 0007.scaffold00024 1982020 1 A T - ReadM SNP 0007.scaffold00024 1982334 1 T A - ReadM SNP 0007.scaffold00024 1982470 1 T C - ScafM INDEL 0007.scaffold00024 1992167 56 ........................................................ CTTGTTCTATGTTAATGTAATATGCACATTTCAAATAGAGATGTTAGTTAGATAAT scaffold9082 ScafM INDEL 0007.scaffold00024 2002755 1 . G scaffold9082 ScafM INDEL 0007.scaffold00024 2003906 1 . T scaffold9082 ScafM SNP 0008.scaffold00029 8 1 T C scaffold15817 ScafM SNP 0008.scaffold00029 59 1 G A scaffold15817 ScafM SNP 0008.scaffold00029 124 1 T G scaffold15817 ScafM SNP 0008.scaffold00029 225 1 A G scaffold15817 ScafM SNP 0008.scaffold00029 263 1 T C scaffold15817 ScafM SNP 0008.scaffold00029 275 1 G A scaffold15817 ScafM SNP 0008.scaffold00029 826 1 A G scaffold11940 ScafM INDEL 0008.scaffold00029 851 1 C . scaffold11940 ScafM SNP 0008.scaffold00029 898 1 A G scaffold11940 ScafM SNP 0008.scaffold00029 943 1 A C scaffold11940 ScafM SNP 0008.scaffold00029 948 1 C T scaffold11940 ScafM INDEL 0008.scaffold00029 2872 2 .. TA scaffold5416 ScafM SNP 0008.scaffold00029 2880 1 G C scaffold5416 ScafM SNP 0008.scaffold00029 2887 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 2979 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 2981 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 3007 1 C T scaffold5416 ScafM SNP 0008.scaffold00029 3035 1 C T scaffold5416 ScafM SNP 0008.scaffold00029 3088 1 G T scaffold5416 ScafM SNP 0008.scaffold00029 3092 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 3128 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 3151 1 G T scaffold5416 ScafM SNP 0008.scaffold00029 3169 1 G A scaffold5416 ScafM SNP 0008.scaffold00029 3203 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 3205 1 G C scaffold5416 ReadM SNP 0008.scaffold00029 3294 1 C T - ReadM SNP 0008.scaffold00029 3302 1 T G - ScafM SNP 0008.scaffold00029 4612 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 4617 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 4635 2 GT AC scaffold5416 ReadM SNP 0008.scaffold00029 4794 1 C A - Both SNP 0008.scaffold00029 4892 1 A G scaffold5416 Both SNP 0008.scaffold00029 4914 1 A G scaffold5416 Both SNP 0008.scaffold00029 4936 1 G C scaffold5416 Both SNP 0008.scaffold00029 4975 1 C T scaffold5416 Both SNP 0008.scaffold00029 4987 1 A G scaffold5416 Both SNP 0008.scaffold00029 5049 1 T G scaffold5416 ReadM INDEL 0008.scaffold00029 5093 1 G . - Both INDEL 0008.scaffold00029 5432 1 T . scaffold5416 Both SNP 0008.scaffold00029 5477 1 G A scaffold5416 ReadM SNP 0008.scaffold00029 5491 1 T C - ReadM SNP 0008.scaffold00029 5567 1 A T - ReadM SNP 0008.scaffold00029 5592 1 G C - ReadM SNP 0008.scaffold00029 5625 1 A G - ReadM SNP 0008.scaffold00029 5743 1 G A - ReadM SNP 0008.scaffold00029 5789 1 T C - ReadM SNP 0008.scaffold00029 5864 1 A C - ReadM SNP 0008.scaffold00029 5946 1 G A - ReadM SNP 0008.scaffold00029 5955 1 A G - ReadM SNP 0008.scaffold00029 5960 1 G T - ReadM SNP 0008.scaffold00029 6029 1 A G - ReadM SNP 0008.scaffold00029 6146 1 T C - ReadM INDEL 0008.scaffold00029 6277 1 . A - ReadM SNP 0008.scaffold00029 6344 1 T C - ReadM SNP 0008.scaffold00029 6354 1 A G - ReadM SNP 0008.scaffold00029 6475 1 G A - ReadM SNP 0008.scaffold00029 6504 1 T C - ReadM SNP 0008.scaffold00029 6514 1 C A - ReadM SNP 0008.scaffold00029 6566 1 T C - ReadM SNP 0008.scaffold00029 6578 1 T C - ReadM SNP 0008.scaffold00029 6602 1 C T - ReadM SNP 0008.scaffold00029 6654 1 C T - ReadM SNP 0008.scaffold00029 6669 1 G A - ReadM SNP 0008.scaffold00029 6695 1 T C - ReadM INDEL 0008.scaffold00029 6719 1 A . - ReadM SNP 0008.scaffold00029 6734 1 C T - ReadM SNP 0008.scaffold00029 6901 1 G A - ReadM SNP 0008.scaffold00029 6992 1 C T - ReadM SNP 0008.scaffold00029 7082 1 G A - ReadM SNP 0008.scaffold00029 7276 1 C T - ReadM SNP 0008.scaffold00029 7351 1 A G - ReadM SNP 0008.scaffold00029 7375 1 A G - ReadM SNP 0008.scaffold00029 7391 1 C T - ReadM SNP 0008.scaffold00029 7404 1 G T - ReadM SNP 0008.scaffold00029 7493 1 G A - ReadM SNP 0008.scaffold00029 7529 1 T A - ReadM SNP 0008.scaffold00029 7539 1 G A - ReadM SNP 0008.scaffold00029 7647 1 T C - ReadM SNP 0008.scaffold00029 7688 1 C T - ReadM SNP 0008.scaffold00029 7722 1 G A - ReadM SNP 0008.scaffold00029 7732 1 A C - ReadM SNP 0008.scaffold00029 7828 1 T G - ReadM SNP 0008.scaffold00029 7859 1 C G - ReadM SNP 0008.scaffold00029 7864 1 A G - ReadM SNP 0008.scaffold00029 8007 2 AA CG - ReadM SNP 0008.scaffold00029 8051 1 G A - ReadM SNP 0008.scaffold00029 8071 1 T G - ReadM SNP 0008.scaffold00029 8076 1 G C - ReadM SNP 0008.scaffold00029 8285 1 T C - ReadM INDEL 0008.scaffold00029 8413 2 TA .. - ReadM SNP 0008.scaffold00029 8424 1 C A - ReadM SNP 0008.scaffold00029 8480 1 T G - ReadM SNP 0008.scaffold00029 8530 1 G A - ReadM SNP 0008.scaffold00029 8650 1 T G - ReadM SNP 0008.scaffold00029 8704 1 T C - ReadM SNP 0008.scaffold00029 8781 1 A G - ReadM SNP 0008.scaffold00029 8938 1 G A - ReadM SNP 0008.scaffold00029 9010 1 A G - ReadM SNP 0008.scaffold00029 9014 1 C A - ReadM SNP 0008.scaffold00029 9019 1 T G - ReadM SNP 0008.scaffold00029 9137 1 T A - ReadM SNP 0008.scaffold00029 9201 1 G T - ReadM INDEL 0008.scaffold00029 9310 1 G . - Both SNP 0008.scaffold00029 9330 1 T C scaffold5416 Both SNP 0008.scaffold00029 9341 1 T C scaffold5416 ScafM SNP 0008.scaffold00029 9379 2 TG AT scaffold5416 ScafM SNP 0008.scaffold00029 9404 2 AT CA scaffold5416 ScafM SNP 0008.scaffold00029 9431 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 9470 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 9536 2 AA CG scaffold5416 ScafM INDEL 0008.scaffold00029 9544 2 GA .T scaffold5416 ScafM SNP 0008.scaffold00029 9550 1 T C scaffold5416 ScafM SNP 0008.scaffold00029 9565 1 G A scaffold5416 ScafM SNP 0008.scaffold00029 10089 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 10098 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 10248 1 T C scaffold5416 Both SNP 0008.scaffold00029 10258 1 T C scaffold5416 ReadM SNP 0008.scaffold00029 10468 1 A G - ReadM SNP 0008.scaffold00029 10473 1 G T - ReadM INDEL 0008.scaffold00029 10479 1 A . - Both SNP 0008.scaffold00029 10743 1 T G scaffold5416 Both SNP 0008.scaffold00029 10795 1 T G scaffold5416 Both SNP 0008.scaffold00029 10892 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 10905 1 A C scaffold5416 ScafM INDEL 0008.scaffold00029 10926 7 ACTCGTA ....... scaffold5416 ScafM SNP 0008.scaffold00029 11031 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 11041 1 G T scaffold5416 ScafM SNP 0008.scaffold00029 11043 1 C T scaffold5416 ScafM INDEL 0008.scaffold00029 11086 2 GA .T scaffold5416 ScafM SNP 0008.scaffold00029 11111 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 11125 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 11166 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 11217 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 11240 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 11256 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 11272 1 T C scaffold5416 ScafM INDEL 0008.scaffold00029 11274 1 . G scaffold5416 ScafM SNP 0008.scaffold00029 11288 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 11295 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 11359 1 G C scaffold5416 ScafM SNP 0008.scaffold00029 11380 1 G T scaffold5416 ScafM SNP 0008.scaffold00029 11399 1 T C scaffold5416 ScafM INDEL 0008.scaffold00029 11414 1 . T scaffold5416 ScafM SNP 0008.scaffold00029 13576 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 13582 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 13629 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 13632 1 A T scaffold5416 ScafM SNP 0008.scaffold00029 13634 1 T A scaffold5416 ScafM SNP 0008.scaffold00029 13643 1 C T scaffold5416 ScafM SNP 0008.scaffold00029 13680 1 T C scaffold5416 ScafM SNP 0008.scaffold00029 13696 1 A C scaffold5416 ScafM INDEL 0008.scaffold00029 13758 1 . G scaffold5416 ScafM SNP 0008.scaffold00029 13780 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 13797 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 13805 1 C T scaffold5416 ScafM SNP 0008.scaffold00029 13822 1 A G scaffold5416 ScafM SNP 0008.scaffold00029 13861 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 13864 1 C G scaffold5416 ScafM SNP 0008.scaffold00029 13870 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 13887 1 C A scaffold5416 ScafM SNP 0008.scaffold00029 13890 1 A C scaffold5416 ScafM SNP 0008.scaffold00029 13897 1 G A scaffold5416 ScafM SNP 0008.scaffold00029 13905 1 C T scaffold5416 ScafM SNP 0008.scaffold00029 13926 1 T C scaffold5416 ScafM INDEL 0008.scaffold00029 13943 2 TT .. scaffold5416 ScafM SNP 0008.scaffold00029 13946 1 T G scaffold5416 ScafM SNP 0008.scaffold00029 13957 1 A T scaffold5416 ScafM SNP 0008.scaffold00029 14008 1 T C scaffold5416 ScafM SNP 0008.scaffold00029 14287 1 T C scaffold5416 ScafM SNP 0008.scaffold00029 14290 1 G T scaffold5416 ScafM SNP 0008.scaffold00029 14320 2 AT GC scaffold5416 ScafM SNP 0008.scaffold00029 14867 1 A T scaffold19689 ScafM SNP 0008.scaffold00029 14898 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 14923 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 14937 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 14941 1 T A scaffold19689 ScafM INDEL 0008.scaffold00029 14965 1 . A scaffold19689 ScafM INDEL 0008.scaffold00029 14972 3 ... AAC scaffold19689 ScafM SNP 0008.scaffold00029 14997 1 C A scaffold19689 ScafM SNP 0008.scaffold00029 15033 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15039 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 15048 1 G C scaffold19689 ScafM INDEL 0008.scaffold00029 15067 1 . T scaffold19689 ScafM SNP 0008.scaffold00029 15069 2 GT AC scaffold19689 ScafM SNP 0008.scaffold00029 15099 1 C G scaffold19689 ScafM SNP 0008.scaffold00029 15116 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 15128 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15173 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 15569 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 15582 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15594 1 A C scaffold19689 ScafM SNP 0008.scaffold00029 15604 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15610 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 15623 1 A C scaffold19689 ScafM INDEL 0008.scaffold00029 15679 3 TTT ..A scaffold19689 ScafM SNP 0008.scaffold00029 15707 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 15723 1 G A scaffold19689 ScafM INDEL 0008.scaffold00029 15726 6 TAACTA ...... scaffold19689 ScafM SNP 0008.scaffold00029 15746 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 15767 1 T A scaffold19689 ScafM SNP 0008.scaffold00029 15774 1 A G scaffold19689 ScafM INDEL 0008.scaffold00029 15780 1 T . scaffold19689 ScafM SNP 0008.scaffold00029 15842 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 15844 1 G T scaffold19689 ScafM SNP 0008.scaffold00029 15848 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 15867 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15869 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 15871 1 A T scaffold19689 ScafM INDEL 0008.scaffold00029 15878 3 TAA ... scaffold19689 ScafM SNP 0008.scaffold00029 15903 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 15941 1 G T scaffold19689 ScafM SNP 0008.scaffold00029 15948 2 AT TC scaffold19689 ScafM INDEL 0008.scaffold00029 15960 1 . G scaffold19689 ScafM SNP 0008.scaffold00029 16165 1 A T scaffold19689 ScafM SNP 0008.scaffold00029 16194 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 16199 1 T C scaffold19689 ScafM SNP 0008.scaffold00029 16206 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 16217 1 A G scaffold19689 ScafM INDEL 0008.scaffold00029 16229 7 CGATGAA ....... scaffold19689 ScafM INDEL 0008.scaffold00029 16238 7 CCGGCGG ....... scaffold19689 ScafM INDEL 0008.scaffold00029 16246 1 A . scaffold19689 ScafM INDEL 0008.scaffold00029 16248 4 GAGC .... scaffold19689 ScafM SNP 0008.scaffold00029 16286 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 16304 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 16744 1 A T scaffold19689 ScafM SNP 0008.scaffold00029 16753 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 16770 1 T A scaffold19689 ScafM SNP 0008.scaffold00029 16808 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 16824 1 T C scaffold19689 ScafM INDEL 0008.scaffold00029 16860 1 T . scaffold19689 ScafM SNP 0008.scaffold00029 16873 1 T A scaffold19689 ScafM SNP 0008.scaffold00029 16898 1 T A scaffold19689 ScafM INDEL 0008.scaffold00029 16921 4 .... ATTG scaffold19689 ScafM SNP 0008.scaffold00029 16924 1 A C scaffold19689 ScafM SNP 0008.scaffold00029 16937 1 A G scaffold19689 ScafM INDEL 0008.scaffold00029 16956 2 .. TA scaffold19689 ScafM SNP 0008.scaffold00029 16963 1 C T scaffold19689 ScafM SNP 0008.scaffold00029 17005 1 G C scaffold19689 ScafM SNP 0008.scaffold00029 17009 1 G A scaffold19689 ScafM SNP 0008.scaffold00029 17018 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 17089 2 CT TC scaffold19689 ScafM SNP 0008.scaffold00029 17102 1 A T scaffold19689 ScafM INDEL 0008.scaffold00029 17107 8 TTCCTTTA .......G scaffold19689 ScafM SNP 0008.scaffold00029 17125 1 T A scaffold19689 ScafM SNP 0008.scaffold00029 17157 1 C T scaffold19689 ScafM INDEL 0008.scaffold00029 17161 1 . A scaffold19689 ScafM SNP 0008.scaffold00029 17169 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 17187 2 CC TT scaffold19689 ScafM SNP 0008.scaffold00029 17193 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 17199 1 T A scaffold19689 ScafM INDEL 0008.scaffold00029 17203 1 . C scaffold19689 ScafM SNP 0008.scaffold00029 17214 1 A G scaffold19689 ScafM SNP 0008.scaffold00029 17609 1 C T scaffold21894 ReadM INDEL 0008.scaffold00029 18197 1 C . - Both SNP 0008.scaffold00029 18240 1 C T scaffold21894 Both SNP 0008.scaffold00029 18298 1 G C scaffold21894 Both SNP 0008.scaffold00029 18343 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 18373 1 T A scaffold21894 ScafM INDEL 0008.scaffold00029 18418 5 ..... ATAAC scaffold21894 ScafM SNP 0008.scaffold00029 18422 1 C T scaffold21894 ScafM INDEL 0008.scaffold00029 18498 7 CAAAAAA ....... scaffold21894 ScafM INDEL 0008.scaffold00029 18582 3 ACA ... scaffold21894 ScafM SNP 0008.scaffold00029 18589 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 18595 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 18600 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 18606 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 18625 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 18629 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 18686 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 18991 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 19007 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 19047 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 19054 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 19056 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 19091 1 G C scaffold21894 Both SNP 0008.scaffold00029 25183 1 T C scaffold21894 Both SNP 0008.scaffold00029 25312 1 C A scaffold21894 Both SNP 0008.scaffold00029 25322 1 G T scaffold21894 Both SNP 0008.scaffold00029 25454 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 26013 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 26243 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 26262 1 A G scaffold21894 ScafM INDEL 0008.scaffold00029 26285 1 . C scaffold21894 ScafM INDEL 0008.scaffold00029 26294 9 AACAAGAGC ......... scaffold21894 ScafM INDEL 0008.scaffold00029 26304 1 T . scaffold21894 ScafM SNP 0008.scaffold00029 26310 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 26344 1 C A scaffold21894 ScafM SNP 0008.scaffold00029 26360 2 GG AA scaffold21894 ScafM SNP 0008.scaffold00029 26363 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 26384 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 26967 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 26989 1 A G scaffold21894 Both SNP 0008.scaffold00029 27018 1 C G scaffold21894 ScafM SNP 0008.scaffold00029 27203 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 27208 1 C A scaffold21894 ScafM SNP 0008.scaffold00029 27221 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 27230 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 27236 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 27243 1 A T scaffold21894 ScafM SNP 0008.scaffold00029 27247 1 A T scaffold21894 ScafM SNP 0008.scaffold00029 27249 1 T G scaffold21894 ScafM SNP 0008.scaffold00029 27292 1 A C scaffold21894 ScafM SNP 0008.scaffold00029 27298 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 27334 1 C A scaffold21894 ScafM SNP 0008.scaffold00029 27355 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 27384 1 A T scaffold21894 ScafM INDEL 0008.scaffold00029 27397 1 . A scaffold21894 ScafM SNP 0008.scaffold00029 27410 1 G C scaffold21894 ScafM SNP 0008.scaffold00029 27419 1 T C scaffold21894 Both INDEL 0008.scaffold00029 27448 1 . A scaffold21894 Both INDEL 0008.scaffold00029 28135 1 G . scaffold21894 ScafM SNP 0008.scaffold00029 28181 1 A C scaffold21894 ScafM SNP 0008.scaffold00029 28185 1 G C scaffold21894 ScafM SNP 0008.scaffold00029 28210 1 T G scaffold21894 ScafM SNP 0008.scaffold00029 28452 1 T C scaffold21894 ReadM SNP 0008.scaffold00029 28884 1 C T - ReadM SNP 0008.scaffold00029 28949 1 A T - ReadM SNP 0008.scaffold00029 28955 1 A T - ScafM SNP 0008.scaffold00029 29062 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 29068 1 G T scaffold21894 Both SNP 0008.scaffold00029 29101 1 C A scaffold21894 Both INDEL 0008.scaffold00029 29119 1 . T scaffold21894 ReadM INDEL 0008.scaffold00029 29201 2 .. AT - Both SNP 0008.scaffold00029 29541 1 T C scaffold21894 Both SNP 0008.scaffold00029 29691 1 C G scaffold21894 ScafM INDEL 0008.scaffold00029 29735 6 ...... TACTAA scaffold21894 ScafM INDEL 0008.scaffold00029 29737 2 .. AA scaffold21894 ScafM INDEL 0008.scaffold00029 29769 1 T . scaffold21894 ScafM SNP 0008.scaffold00029 29809 1 G C scaffold21894 Both SNP 0008.scaffold00029 29822 1 C T scaffold21894 Both SNP 0008.scaffold00029 29849 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 29942 1 C A scaffold21894 Both SNP 0008.scaffold00029 29977 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 29999 1 T C scaffold21894 ReadM SNP 0008.scaffold00029 30070 1 C T - ReadM SNP 0008.scaffold00029 30106 1 T C - ScafM SNP 0008.scaffold00029 30132 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 30135 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 30139 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 30152 1 T C scaffold21894 Both SNP 0008.scaffold00029 30176 1 A G scaffold21894 Both SNP 0008.scaffold00029 30225 1 A T scaffold21894 ScafM SNP 0008.scaffold00029 30259 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 30286 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 30289 1 A G scaffold21894 Both SNP 0008.scaffold00029 30324 1 T C scaffold21894 Both SNP 0008.scaffold00029 30407 1 C T scaffold21894 ScafM INDEL 0008.scaffold00029 30460 2 .. AG scaffold21894 ScafM SNP 0008.scaffold00029 30500 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 30636 1 T G scaffold21894 ScafM SNP 0008.scaffold00029 30662 1 T G scaffold21894 ScafM SNP 0008.scaffold00029 31505 1 A G scaffold21894 ReadM SNP 0008.scaffold00029 31918 1 A G - ReadM SNP 0008.scaffold00029 31927 1 C T - ScafM SNP 0008.scaffold00029 33587 1 C T scaffold4964 ScafM INDEL 0008.scaffold00029 34020 1 A . scaffold4964 ScafM SNP 0008.scaffold00029 34029 1 C A scaffold4964 ScafM SNP 0008.scaffold00029 34065 1 A C scaffold4964 ScafM SNP 0008.scaffold00029 34088 1 A T scaffold4964 ScafM INDEL 0008.scaffold00029 34099 5 AAAAC ..... scaffold4964 ScafM SNP 0008.scaffold00029 34123 1 A G scaffold4964 ScafM SNP 0008.scaffold00029 34135 1 A C scaffold4964 ScafM SNP 0008.scaffold00029 34159 1 T C scaffold4964 ScafM SNP 0008.scaffold00029 34176 1 A G scaffold4964 ScafM SNP 0008.scaffold00029 34211 1 A G scaffold4964 ScafM SNP 0008.scaffold00029 34220 1 C G scaffold4964 ScafM INDEL 0008.scaffold00029 34266 1 A . scaffold4964 ScafM SNP 0008.scaffold00029 34324 1 G T scaffold4964 ScafM SNP 0008.scaffold00029 34374 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 34384 1 C T scaffold4964 ReadM SNP 0008.scaffold00029 34480 1 T G - ScafM SNP 0008.scaffold00029 34543 1 T G scaffold4964 ScafM SNP 0008.scaffold00029 34614 1 C T scaffold4964 ScafM SNP 0008.scaffold00029 34625 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 34644 1 G A scaffold4964 ScafM INDEL 0008.scaffold00029 34781 6 ...... ACTCAA scaffold4964 ScafM SNP 0008.scaffold00029 34787 1 A C scaffold4964 ScafM INDEL 0008.scaffold00029 34789 1 . T scaffold4964 ScafM SNP 0008.scaffold00029 34794 1 C T scaffold4964 ScafM SNP 0008.scaffold00029 34808 1 C T scaffold4964 ScafM SNP 0008.scaffold00029 34850 1 C T scaffold4964 ScafM SNP 0008.scaffold00029 34874 1 G A scaffold4964 ReadM SNP 0008.scaffold00029 34943 1 T C - Both SNP 0008.scaffold00029 34952 1 G A scaffold4964 Both SNP 0008.scaffold00029 34976 1 C A scaffold4964 Both INDEL 0008.scaffold00029 35090 1 . T scaffold4964 ScafM INDEL 0008.scaffold00029 35091 1 . T scaffold4964 Both SNP 0008.scaffold00029 35160 1 C T scaffold4964 ScafM INDEL 0008.scaffold00029 35304 1 T . scaffold4964 ScafM SNP 0008.scaffold00029 35356 1 A C scaffold4964 ScafM SNP 0008.scaffold00029 35446 1 C A scaffold4964 ScafM SNP 0008.scaffold00029 35457 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 35579 1 A C scaffold4964 ScafM INDEL 0008.scaffold00029 35597 4 AGAT .... scaffold4964 ScafM SNP 0008.scaffold00029 35764 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 35767 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 35778 1 G A scaffold4964 ScafM SNP 0008.scaffold00029 35805 1 T C scaffold4964 ScafM SNP 0008.scaffold00029 35923 1 A C scaffold4964 ScafM SNP 0008.scaffold00029 35972 1 T C scaffold4964 ScafM SNP 0008.scaffold00029 35979 1 G T scaffold4964 ScafM SNP 0008.scaffold00029 35983 1 C T scaffold4964 ScafM SNP 0008.scaffold00029 35987 1 C G scaffold4964 ScafM SNP 0008.scaffold00029 36002 1 C T scaffold4964 ReadM SNP 0008.scaffold00029 36582 1 C A - ReadM SNP 0008.scaffold00029 36884 1 T A - ScafM INDEL 0008.scaffold00029 37018 1 . C scaffold21894 ScafM SNP 0008.scaffold00029 37024 1 T C scaffold21894 ScafM SNP 0008.scaffold00029 37046 1 G C scaffold21894 ScafM SNP 0008.scaffold00029 37083 1 C T scaffold21894 ReadM SNP 0008.scaffold00029 37367 1 G A - ReadM SNP 0008.scaffold00029 38307 1 G C - ReadM SNP 0008.scaffold00029 38313 1 T A - ReadM SNP 0008.scaffold00029 38466 1 C T - ReadM SNP 0008.scaffold00029 38483 1 A C - Both SNP 0008.scaffold00029 38600 1 T G scaffold21894 Both SNP 0008.scaffold00029 38649 1 T C scaffold21894 Both SNP 0008.scaffold00029 38706 1 A G scaffold21894 ScafM SNP 0008.scaffold00029 38799 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 38823 1 A T scaffold21894 ScafM SNP 0008.scaffold00029 38826 1 A C scaffold21894 ReadM SNP 0008.scaffold00029 38876 1 C T - ReadM SNP 0008.scaffold00029 38920 1 C A - ScafM SNP 0008.scaffold00029 52937 1 T C scaffold24692 ScafM SNP 0008.scaffold00029 52983 1 A C scaffold24692 ScafM SNP 0008.scaffold00029 52994 1 G T scaffold24692 ScafM SNP 0008.scaffold00029 53065 1 T C scaffold24692 ScafM SNP 0008.scaffold00029 53279 1 C A scaffold24692 ScafM SNP 0008.scaffold00029 53308 1 A C scaffold24692 ScafM SNP 0008.scaffold00029 53319 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53321 1 T C scaffold24692 ScafM SNP 0008.scaffold00029 53338 1 T G scaffold24692 ScafM SNP 0008.scaffold00029 53356 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53434 1 T C scaffold24692 ScafM SNP 0008.scaffold00029 53436 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53455 1 C T scaffold24692 ScafM INDEL 0008.scaffold00029 53501 1 . A scaffold24692 ScafM SNP 0008.scaffold00029 53581 1 C T scaffold24692 ScafM INDEL 0008.scaffold00029 53621 1 A . scaffold24692 ScafM SNP 0008.scaffold00029 53650 1 G A scaffold24692 ScafM INDEL 0008.scaffold00029 53659 9 ......... GGGAGGTTA scaffold24692 ScafM SNP 0008.scaffold00029 53701 1 C T scaffold24692 ScafM SNP 0008.scaffold00029 53710 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53765 1 C T scaffold24692 ScafM SNP 0008.scaffold00029 53807 1 C T scaffold24692 ScafM SNP 0008.scaffold00029 53810 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53845 1 G A scaffold24692 ScafM SNP 0008.scaffold00029 53912 1 G A scaffold24692 ScafM INDEL 0008.scaffold00029 53916 1 G . scaffold24692 ScafM SNP 0008.scaffold00029 53923 1 C G scaffold24692 ScafM SNP 0008.scaffold00029 53927 1 A G scaffold24692 ScafM SNP 0008.scaffold00029 53940 1 T C scaffold24692 ScafM SNP 0008.scaffold00029 54976 1 G A scaffold21894 ScafM SNP 0008.scaffold00029 55021 1 T C scaffold21894 Both SNP 0008.scaffold00029 55249 1 T C scaffold21894 Both SNP 0008.scaffold00029 55306 1 T A scaffold21894 Both SNP 0008.scaffold00029 55444 1 G T scaffold21894 Both SNP 0008.scaffold00029 55463 1 C A scaffold21894 ReadM INDEL 0008.scaffold00029 55655 1 . A - ScafM INDEL 0008.scaffold00029 55655 2 .T AC scaffold21894 ScafM SNP 0008.scaffold00029 55853 1 A C scaffold21894 Both INDEL 0008.scaffold00029 55858 2 AT .. scaffold21894 Both SNP 0008.scaffold00029 56066 1 T C scaffold21894 Both SNP 0008.scaffold00029 56076 1 C T scaffold21894 ScafM SNP 0008.scaffold00029 64667 1 T A scaffold21894 ScafM SNP 0008.scaffold00029 64670 1 G A scaffold21894 ReadM SNP 0008.scaffold00029 89393 1 G T - ScafM SNP 0008.scaffold00029 92910 1 C T scaffold20268 ScafM SNP 0008.scaffold00029 92920 1 T C scaffold20268 ScafM INDEL 0008.scaffold00029 92947 7 ....... TTCCTAT scaffold20268 ScafM SNP 0008.scaffold00029 92965 1 T C scaffold20268 ScafM SNP 0008.scaffold00029 92990 1 C A scaffold20268 ScafM INDEL 0008.scaffold00029 92994 12 TAAAATAATTAT ...........G scaffold20268 ScafM SNP 0008.scaffold00029 93031 1 C G scaffold20268 ScafM SNP 0008.scaffold00029 93099 1 T A scaffold20268 ScafM SNP 0008.scaffold00029 93355 1 A T scaffold7263 ScafM SNP 0008.scaffold00029 93360 1 A C scaffold7263 ScafM SNP 0008.scaffold00029 93430 1 T C scaffold7263 ScafM SNP 0008.scaffold00029 93467 1 C G scaffold7263 ScafM SNP 0008.scaffold00029 93712 1 A C scaffold7263 ScafM SNP 0008.scaffold00029 93779 1 A T scaffold7263 ScafM SNP 0008.scaffold00029 93807 1 C T scaffold7263 ScafM SNP 0008.scaffold00029 93862 1 A C scaffold7263 ScafM SNP 0008.scaffold00029 93960 1 T C scaffold7263 ScafM SNP 0008.scaffold00029 94023 1 T C scaffold7263 ScafM SNP 0008.scaffold00029 94066 1 A G scaffold7263 ScafM SNP 0008.scaffold00029 94240 1 G C scaffold7263 ScafM SNP 0008.scaffold00029 94295 1 T C scaffold7263 ScafM SNP 0008.scaffold00029 94305 1 A G scaffold7263 ScafM SNP 0008.scaffold00029 94462 1 A T scaffold7263 ScafM INDEL 0008.scaffold00029 94465 65 TCTTTCTATTAACAGTTGAGTAGGGCAATCGAGTATAGAATTCAAATAACAACAATCATCTGCGA ................................................................. scaffold7263 ScafM SNP 0008.scaffold00029 94616 1 A G scaffold7263 ScafM SNP 0008.scaffold00029 94683 1 T C scaffold7263 ScafM SNP 0008.scaffold00029 94715 1 A C scaffold7263 ScafM SNP 0008.scaffold00029 94732 1 G A scaffold7263 ScafM SNP 0008.scaffold00029 94776 1 C T scaffold7263 ScafM INDEL 0008.scaffold00029 147095 1 . T scaffold17493 ReadM SNP 0008.scaffold00029 153912 1 T C - ReadM SNP 0008.scaffold00029 175982 1 A G - ScafM INDEL 0008.scaffold00029 182515 9 ......... GGGGGGGGG scaffold4913 ScafM SNP 0008.scaffold00029 184887 1 C T scaffold4913 ScafM SNP 0008.scaffold00029 184925 1 C T scaffold4913 ScafM INDEL 0008.scaffold00029 190524 1 . A scaffold4913 ScafM INDEL 0008.scaffold00029 191052 1 . A scaffold4913 ScafM SNP 0008.scaffold00029 200044 1 C A scaffold4913 ReadM SNP 0008.scaffold00029 204936 1 G T - ScafM INDEL 0008.scaffold00029 210284 2 .. AA scaffold4913 ScafM SNP 0008.scaffold00029 219523 1 G T scaffold4913 ScafM SNP 0008.scaffold00029 219559 1 G A scaffold4913 Both SNP 0008.scaffold00029 232117 1 C T scaffold4913 ScafM INDEL 0008.scaffold00029 261098 1 . T scaffold1938 ScafM SNP 0008.scaffold00029 278376 1 T G scaffold1938 ReadM SNP 0008.scaffold00029 284665 1 C G - ScafM SNP 0008.scaffold00029 296439 1 A C scaffold21192 ScafM INDEL 0008.scaffold00029 313214 1 C . scaffold1239 ScafM SNP 0008.scaffold00029 313221 1 T G scaffold1239 ReadM SNP 0008.scaffold00029 317510 1 G A - ScafM INDEL 0008.scaffold00029 327290 1 . T scaffold1239 ReadM INDEL 0008.scaffold00029 350191 1 . T - ReadM SNP 0008.scaffold00029 352534 1 T G - ScafM SNP 0008.scaffold00029 366231 1 C T scaffold1239 ScafM INDEL 0008.scaffold00029 372342 1 . A scaffold1239 ScafM INDEL 0008.scaffold00029 372762 1 . T scaffold1239 ScafM INDEL 0008.scaffold00029 373452 2 .. AA scaffold1239 ScafM INDEL 0008.scaffold00029 375031 1 . T scaffold1239 ScafM INDEL 0008.scaffold00029 378391 1 T . scaffold1239 ScafM INDEL 0008.scaffold00029 378844 4 .... CAAC scaffold1239 Both SNP 0008.scaffold00029 379448 1 C T scaffold1239 ScafM SNP 0008.scaffold00029 380838 1 T C scaffold1239 ScafM SNP 0008.scaffold00029 402924 1 T C scaffold1239 ScafM INDEL 0008.scaffold00029 403026 69 ..................................................................... TGTATATGAACGTGAAAAATATAGTGCATATGATGTATATGGTCTAGGGTTTGGGTCTAAAATTTAGGG scaffold1239 ScafM SNP 0008.scaffold00029 406456 2 AA GG scaffold1239 ScafM INDEL 0008.scaffold00029 406477 1 G . scaffold1239 ScafM SNP 0008.scaffold00029 406485 1 C A scaffold1239 ScafM SNP 0008.scaffold00029 406489 2 GC AT scaffold1239 ScafM SNP 0008.scaffold00029 406499 1 T A scaffold1239 ScafM SNP 0008.scaffold00029 406503 1 A G scaffold1239 ScafM SNP 0008.scaffold00029 406508 1 A T scaffold1239 ScafM SNP 0008.scaffold00029 406517 1 T A scaffold1239 ScafM SNP 0008.scaffold00029 408228 2 GC AA scaffold1239 ScafM SNP 0008.scaffold00029 408231 3 TGC AAA scaffold1239 ScafM SNP 0008.scaffold00029 433606 1 G A scaffold2295 ScafM SNP 0008.scaffold00029 433748 1 A G scaffold2295 ReadM INDEL 0008.scaffold00029 440521 1 G . - ScafM INDEL 0008.scaffold00029 450551 1 A . scaffold3801 ScafM INDEL 0008.scaffold00029 458946 1 . C scaffold3801 ScafM INDEL 0008.scaffold00029 468763 34 .................................. CTCAAGTGCCATATAAATTAAGTGACCCCCCCCC scaffold3801 Both SNP 0008.scaffold00029 470162 1 T C scaffold3801 ScafM SNP 0008.scaffold00029 475906 1 G T scaffold6047 ScafM SNP 0008.scaffold00029 475953 2 AG GT scaffold6047 ScafM INDEL 0008.scaffold00029 475959 2 .C GT scaffold6047 ScafM INDEL 0008.scaffold00029 475987 11 ........... TGCAACATTAT scaffold6047 ScafM SNP 0008.scaffold00029 476038 1 A G scaffold6047 ScafM SNP 0008.scaffold00029 476059 1 T C scaffold6047 ScafM SNP 0008.scaffold00029 476131 1 T C scaffold6047 ScafM SNP 0008.scaffold00029 476150 1 A G scaffold6047 Both SNP 0008.scaffold00029 478201 1 T C scaffold3801 ScafM SNP 0008.scaffold00029 480250 1 T A scaffold16732 ScafM SNP 0008.scaffold00029 484758 1 C T scaffold5585 ScafM SNP 0008.scaffold00029 484780 1 T G scaffold5585 ScafM SNP 0008.scaffold00029 484786 1 A G scaffold5585 ScafM INDEL 0008.scaffold00029 485127 2 .. TA scaffold18222 ScafM SNP 0008.scaffold00029 485139 1 C T scaffold18222 ScafM SNP 0008.scaffold00029 485178 1 G C scaffold18222 ScafM INDEL 0008.scaffold00029 485216 2 .. AA scaffold18222 ScafM SNP 0008.scaffold00029 485286 1 A G scaffold18222 ScafM SNP 0008.scaffold00029 485307 1 A G scaffold18222 ScafM SNP 0008.scaffold00029 485326 1 T A scaffold18222 ScafM SNP 0008.scaffold00029 485442 1 T C scaffold18222 ScafM SNP 0008.scaffold00029 485460 1 A G scaffold18222 ScafM INDEL 0008.scaffold00029 485572 4 TATT .... scaffold18222 ScafM SNP 0008.scaffold00029 485582 1 G T scaffold18222 ScafM SNP 0008.scaffold00029 485608 1 G A scaffold18222 ScafM SNP 0008.scaffold00029 485614 1 A G scaffold18222 ScafM SNP 0008.scaffold00029 485620 1 A G scaffold18222 ScafM SNP 0008.scaffold00029 485628 1 T C scaffold18222 ScafM SNP 0008.scaffold00029 485685 1 A G scaffold18222 ScafM SNP 0008.scaffold00029 485721 1 G C scaffold18222 ScafM SNP 0008.scaffold00029 485737 1 G T scaffold18222 ScafM INDEL 0008.scaffold00029 486381 1 A . scaffold2643 ScafM SNP 0008.scaffold00029 486390 1 C T scaffold2643 ScafM SNP 0008.scaffold00029 487927 1 T C scaffold11316 Both SNP 0008.scaffold00029 491339 1 C T scaffold11316 Both SNP 0008.scaffold00029 493526 1 G T scaffold11316 ScafM INDEL 0008.scaffold00029 493934 8 ........ CCCCCCCC scaffold11316 ReadM SNP 0008.scaffold00029 502895 1 T G - ScafM SNP 0008.scaffold00029 502910 2 AA CT scaffold11316 ScafM INDEL 0008.scaffold00029 507107 1 C . scaffold11316 ScafM SNP 0008.scaffold00029 507123 1 A C scaffold11316 ScafM SNP 0008.scaffold00029 514738 1 T A scaffold11316 ScafM INDEL 0008.scaffold00029 516404 13 ............. CCCCCCCCCCCCC scaffold11316 Both SNP 0008.scaffold00029 522639 1 G T scaffold11316 ScafM SNP 0008.scaffold00029 526039 1 T C scaffold11316 Both INDEL 0008.scaffold00029 528268 3 ... AAG scaffold11316 ScafM INDEL 0008.scaffold00029 536248 1 . T scaffold22486 ScafM SNP 0008.scaffold00029 537207 1 C G scaffold954 Both SNP 0008.scaffold00029 560134 1 T C scaffold20959 ScafM INDEL 0008.scaffold00029 560708 12 ............ CCCCCCCCCCCC scaffold20959 Both SNP 0008.scaffold00029 561541 1 G A scaffold20959 ScafM INDEL 0008.scaffold00029 578552 2 .. AT scaffold20959 ScafM INDEL 0008.scaffold00029 597996 2 TC .. scaffold5397 ScafM SNP 0008.scaffold00029 598000 1 A C scaffold5397 ScafM SNP 0008.scaffold00029 598004 2 CT AA scaffold5397 ScafM SNP 0008.scaffold00029 598008 2 TT GG scaffold5397 ScafM INDEL 0008.scaffold00029 598012 2 TT .G scaffold5397 ScafM SNP 0008.scaffold00029 598015 1 T G scaffold5397 ScafM INDEL 0008.scaffold00029 598021 1 . C scaffold5397 ScafM SNP 0008.scaffold00029 598023 5 ATTTT GACGA scaffold5397 ScafM SNP 0008.scaffold00029 598032 2 AT TA scaffold5397 ScafM SNP 0008.scaffold00029 598035 2 GA AT scaffold5397 ScafM SNP 0008.scaffold00029 598038 3 CAA GGT scaffold5397 ScafM INDEL 0008.scaffold00029 599423 13 ............. GGGGGGGGGGGGG scaffold5397 ReadM INDEL 0008.scaffold00029 603698 1 . T - ScafM SNP 0008.scaffold00029 608717 1 G A scaffold1988 ScafM SNP 0008.scaffold00029 608721 1 A G scaffold1988 ScafM SNP 0008.scaffold00029 608741 1 C T scaffold1988 ScafM SNP 0008.scaffold00029 608758 1 G T scaffold1988 ScafM SNP 0008.scaffold00029 608813 1 C T scaffold1988 ScafM SNP 0008.scaffold00029 608881 1 C T scaffold1988 ScafM SNP 0008.scaffold00029 608940 1 A G scaffold1988 ScafM SNP 0008.scaffold00029 608945 1 A C scaffold1988 ScafM SNP 0008.scaffold00029 608968 1 A G scaffold1988 ScafM SNP 0008.scaffold00029 608996 1 T C scaffold1988 ScafM SNP 0008.scaffold00029 608998 1 G A scaffold1988 ScafM SNP 0008.scaffold00029 609017 1 A G scaffold1988 ScafM SNP 0008.scaffold00029 609022 1 G A scaffold1988 ScafM SNP 0008.scaffold00029 615374 1 C T scaffold5397 ScafM SNP 0008.scaffold00029 615452 1 T C scaffold5397 ReadM SNP 0008.scaffold00029 632153 1 T G - ReadM INDEL 0008.scaffold00029 632433 3 TTG ... - ReadM INDEL 0008.scaffold00029 633932 3 TGT ... - ScafM INDEL 0008.scaffold00029 638524 1 . T scaffold5397 ScafM SNP 0008.scaffold00029 650807 1 G A scaffold564 ScafM SNP 0008.scaffold00029 650848 1 T G scaffold564 ScafM SNP 0008.scaffold00029 650853 1 G C scaffold564 ScafM SNP 0008.scaffold00029 650964 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651038 1 A C scaffold564 ScafM SNP 0008.scaffold00029 651152 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651187 1 C G scaffold564 ScafM INDEL 0008.scaffold00029 651199 1 T . scaffold564 ScafM SNP 0008.scaffold00029 651220 1 T A scaffold564 ScafM SNP 0008.scaffold00029 651229 1 C T scaffold564 ScafM SNP 0008.scaffold00029 651234 1 G A scaffold564 ScafM SNP 0008.scaffold00029 651246 1 C A scaffold564 ScafM SNP 0008.scaffold00029 651272 1 T G scaffold564 ScafM SNP 0008.scaffold00029 651430 1 G A scaffold564 ScafM SNP 0008.scaffold00029 651485 2 GG TA scaffold564 ScafM SNP 0008.scaffold00029 651556 1 C T scaffold564 ScafM SNP 0008.scaffold00029 651571 1 G A scaffold564 ScafM SNP 0008.scaffold00029 651573 1 T C scaffold564 ScafM SNP 0008.scaffold00029 651600 1 G A scaffold564 ScafM SNP 0008.scaffold00029 651622 3 GTC AAA scaffold564 ScafM SNP 0008.scaffold00029 651640 1 A T scaffold564 ScafM SNP 0008.scaffold00029 651647 1 T C scaffold564 ScafM SNP 0008.scaffold00029 651658 1 G A scaffold564 ScafM SNP 0008.scaffold00029 651710 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651783 2 TT CC scaffold564 ScafM SNP 0008.scaffold00029 651812 1 T G scaffold564 ScafM SNP 0008.scaffold00029 651826 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651832 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651880 1 T G scaffold564 ScafM SNP 0008.scaffold00029 651903 1 T A scaffold564 ScafM SNP 0008.scaffold00029 651967 1 A G scaffold564 ScafM SNP 0008.scaffold00029 651999 1 A G scaffold564 ReadM SNP 0008.scaffold00029 652034 1 G A - ScafM SNP 0008.scaffold00029 652052 1 A G scaffold564 ScafM SNP 0008.scaffold00029 652084 1 A G scaffold564 ScafM SNP 0008.scaffold00029 652140 1 T C scaffold564 ScafM INDEL 0008.scaffold00029 652195 1 A . scaffold564 ScafM SNP 0008.scaffold00029 652215 1 T A scaffold564 ScafM SNP 0008.scaffold00029 652220 1 T C scaffold564 ScafM SNP 0008.scaffold00029 652249 1 A G scaffold564 ScafM SNP 0008.scaffold00029 652319 1 T C scaffold564 ScafM SNP 0008.scaffold00029 652364 1 G T scaffold564 Both INDEL 0008.scaffold00029 661035 2 CC .. scaffold17508 ScafM SNP 0008.scaffold00029 676603 1 A G scaffold17508 ScafM INDEL 0008.scaffold00029 697296 1 . T scaffold4271 ScafM SNP 0008.scaffold00029 706524 1 A T scaffold4271 ScafM SNP 0008.scaffold00029 706531 1 A C scaffold4271 ScafM INDEL 0008.scaffold00029 706536 7 ....... AACCCCA scaffold4271 ReadM INDEL 0008.scaffold00029 708286 1 . T - ScafM INDEL 0008.scaffold00029 708579 1 C . scaffold1530 ScafM INDEL 0008.scaffold00029 708581 1 C . scaffold1530 ScafM INDEL 0008.scaffold00029 708593 4 TTCG .... scaffold1530 ScafM SNP 0008.scaffold00029 708601 1 T C scaffold1530 ScafM INDEL 0008.scaffold00029 708625 1 G . scaffold1530 ScafM SNP 0008.scaffold00029 708670 2 AC GA scaffold1530 ScafM INDEL 0008.scaffold00029 708708 3 AAA .CT scaffold1530 ScafM SNP 0008.scaffold00029 708717 1 C T scaffold1530 ScafM SNP 0008.scaffold00029 708772 1 A G scaffold1530 ScafM INDEL 0008.scaffold00029 708796 1 . T scaffold1530 ScafM SNP 0008.scaffold00029 708802 1 C T scaffold1530 ScafM SNP 0008.scaffold00029 708882 1 T C scaffold1530 ScafM INDEL 0008.scaffold00029 708896 1 A . scaffold1530 ScafM SNP 0008.scaffold00029 708915 1 C T scaffold1530 ScafM SNP 0008.scaffold00029 708922 1 A T scaffold1530 ScafM SNP 0008.scaffold00029 708945 1 A G scaffold1530 ScafM SNP 0008.scaffold00029 709004 1 A T scaffold1530 ScafM SNP 0008.scaffold00029 709006 1 A G scaffold1530 ScafM SNP 0008.scaffold00029 709025 1 G A scaffold1530 ScafM SNP 0008.scaffold00029 709027 1 T G scaffold1530 ScafM SNP 0008.scaffold00029 709046 1 A G scaffold1530 ScafM INDEL 0008.scaffold00029 709076 1 . T scaffold1530 ScafM INDEL 0008.scaffold00029 715175 1 . T scaffold4271 ScafM INDEL 0008.scaffold00029 716617 1 . T scaffold4271 ScafM INDEL 0008.scaffold00029 732221 55 ....................................................... CCACATCAGGTGACAAAAAAACTTGATCCAATTTGTCAAACTTATCTAGTTCTTT scaffold4271 ScafM SNP 0008.scaffold00029 732475 1 G A scaffold4271 ScafM INDEL 0008.scaffold00029 741886 22 ...................... TTTTTTTTTTTTTTTTTTTTTT scaffold4271 ReadM SNP 0008.scaffold00029 744572 1 C T - ScafM SNP 0008.scaffold00029 745233 1 A G scaffold4271 ScafM INDEL 0008.scaffold00029 765422 3 ... AAT scaffold4271 ScafM SNP 0008.scaffold00029 765815 2 GA AG scaffold4271 ReadM INDEL 0008.scaffold00029 770072 1 . A - ReadM SNP 0008.scaffold00029 770897 1 C G - ScafM INDEL 0008.scaffold00029 792863 22 ...................... AAAAAAAAAAAAAAAAAAAAAA scaffold4271 ScafM SNP 0008.scaffold00029 801001 1 G T scaffold4271 ScafM INDEL 0008.scaffold00029 801234 1 . A scaffold4271 ReadM SNP 0008.scaffold00029 825200 1 G A - ScafM SNP 0008.scaffold00029 830162 1 T C scaffold4271 ScafM INDEL 0008.scaffold00029 837825 1 . G scaffold4271 ScafM INDEL 0008.scaffold00029 837832 1 C . scaffold4271 ScafM SNP 0008.scaffold00029 837887 2 TT CA scaffold4271 ScafM SNP 0008.scaffold00029 838060 1 T G scaffold4271 ScafM SNP 0008.scaffold00029 838121 1 G T scaffold4271 ScafM INDEL 0008.scaffold00029 838377 1 . A scaffold4271 Both SNP 0008.scaffold00029 843942 1 G A scaffold4271 ScafM INDEL 0008.scaffold00029 852498 4 CCTT .... scaffold4271 ScafM SNP 0008.scaffold00029 852539 1 T A scaffold4271 ScafM INDEL 0008.scaffold00029 852541 1 C . scaffold4271 ScafM SNP 0008.scaffold00029 852543 1 G A scaffold4271 ScafM SNP 0008.scaffold00029 852545 1 G A scaffold4271 ScafM INDEL 0008.scaffold00029 852549 6 TTTTAA ...... scaffold4271 ScafM INDEL 0008.scaffold00029 852557 1 G . scaffold4271 ScafM INDEL 0008.scaffold00029 852559 1 A . scaffold4271 Both SNP 0008.scaffold00029 854592 1 C G scaffold4271 ReadM SNP 0008.scaffold00029 855723 1 A G - ScafM SNP 0008.scaffold00029 870955 1 C A scaffold4271 ScafM SNP 0008.scaffold00029 892677 1 C T scaffold19352 ScafM SNP 0008.scaffold00029 892683 1 G T scaffold19352 ScafM SNP 0008.scaffold00029 892704 1 G A scaffold19352 ScafM SNP 0008.scaffold00029 892723 1 A T scaffold19352 ScafM SNP 0008.scaffold00029 892755 1 G A scaffold19352 ScafM SNP 0008.scaffold00029 892761 1 G T scaffold19352 ScafM SNP 0008.scaffold00029 892779 1 T C scaffold19352 ScafM SNP 0008.scaffold00029 892822 1 A G scaffold19352 ReadM SNP 0008.scaffold00029 895621 1 A G - ScafM INDEL 0008.scaffold00029 899129 1 . C scaffold4271 ReadM SNP 0008.scaffold00029 904874 1 C G - ScafM SNP 0008.scaffold00029 909631 1 G A scaffold4271 ScafM INDEL 0008.scaffold00029 921568 12 ............ GGGGGGGGGGGG scaffold11038 ScafM INDEL 0008.scaffold00029 922425 2 TT .. scaffold11038 ScafM INDEL 0008.scaffold00029 922461 4 TTTT .... scaffold11038 ScafM INDEL 0008.scaffold00029 922466 10 TTTTAAATTA .......... scaffold11038 ScafM INDEL 0008.scaffold00029 922477 2 TT .. scaffold11038 ScafM INDEL 0008.scaffold00029 922480 3 ATA ... scaffold11038 ScafM INDEL 0008.scaffold00029 922484 3 ATA ..C scaffold11038 ScafM SNP 0008.scaffold00029 922488 3 AAG CCC scaffold11038 Both INDEL 0008.scaffold00029 923372 1 . T scaffold11038 Both SNP 0008.scaffold00029 925042 1 G T scaffold11038 Both SNP 0008.scaffold00029 925438 1 G A scaffold11038 ReadM SNP 0008.scaffold00029 925549 1 T G - ReadM SNP 0008.scaffold00029 925583 1 T C - ScafM SNP 0008.scaffold00029 925668 1 T A scaffold11038 Both SNP 0008.scaffold00029 925826 1 A T scaffold11038 Both SNP 0008.scaffold00029 925835 1 G A scaffold11038 ScafM SNP 0008.scaffold00029 925849 1 C A scaffold11038 ScafM SNP 0008.scaffold00029 925861 1 T G scaffold11038 ScafM SNP 0008.scaffold00029 926067 1 G A scaffold11038 ScafM INDEL 0008.scaffold00029 926078 1 G . scaffold11038 ScafM INDEL 0008.scaffold00029 926088 2 .. AT scaffold11038 Both SNP 0008.scaffold00029 926165 1 A T scaffold11038 Both SNP 0008.scaffold00029 926207 1 A C scaffold11038 Both SNP 0008.scaffold00029 926224 1 T C scaffold11038 ScafM SNP 0008.scaffold00029 926275 1 A T scaffold11038 ScafM INDEL 0008.scaffold00029 926286 1 A . scaffold11038 ScafM SNP 0008.scaffold00029 926318 1 A G scaffold11038 ScafM INDEL 0008.scaffold00029 926330 2 GC .. scaffold11038 ScafM SNP 0008.scaffold00029 926333 1 A C scaffold11038 ScafM SNP 0008.scaffold00029 926337 1 A T scaffold11038 ScafM SNP 0008.scaffold00029 926339 6 AAAAAA TTTTTT scaffold11038 ScafM INDEL 0008.scaffold00029 926374 1 A . scaffold11038 ScafM INDEL 0008.scaffold00029 926687 1 A . scaffold11038 Both SNP 0008.scaffold00029 926701 1 C T scaffold11038 Both SNP 0008.scaffold00029 926725 1 A G scaffold11038 Both SNP 0008.scaffold00029 927273 1 C T scaffold11038 Both SNP 0008.scaffold00029 927509 1 A G scaffold11038 Both SNP 0008.scaffold00029 927754 1 G C scaffold11038 ScafM SNP 0008.scaffold00029 929295 1 C G scaffold11038 ScafM INDEL 0008.scaffold00029 929388 1 C . scaffold11038 ScafM SNP 0008.scaffold00029 929968 1 A T scaffold11038 ScafM INDEL 0008.scaffold00029 930010 2 .. TT scaffold11038 ScafM SNP 0008.scaffold00029 930076 1 T C scaffold11038 ScafM INDEL 0008.scaffold00029 930114 1 . T scaffold11038 ScafM INDEL 0008.scaffold00029 930115 1 . A scaffold11038 ScafM SNP 0008.scaffold00029 930118 1 T G scaffold11038 Both SNP 0008.scaffold00029 930543 1 A G scaffold11038 Both INDEL 0008.scaffold00029 930561 1 . T scaffold11038 Both SNP 0008.scaffold00029 930574 1 C A scaffold11038 Both INDEL 0008.scaffold00029 931019 1 G . scaffold11038 Both SNP 0008.scaffold00029 931374 1 A T scaffold11038 ReadM SNP 0008.scaffold00029 931718 1 A G - ReadM SNP 0008.scaffold00029 931763 1 A G - Both INDEL 0008.scaffold00029 931820 1 . A scaffold11038 Both SNP 0008.scaffold00029 933128 1 C G scaffold11038 Both SNP 0008.scaffold00029 933597 1 T C scaffold11038 Both SNP 0008.scaffold00029 933634 1 G A scaffold11038 ScafM SNP 0008.scaffold00029 933766 1 A C scaffold11038 ScafM INDEL 0008.scaffold00029 933800 14 AGCTACTGTAACTG .............. scaffold11038 ScafM INDEL 0008.scaffold00029 933816 1 G . scaffold11038 ScafM SNP 0008.scaffold00029 933958 1 T A scaffold11038 ScafM INDEL 0008.scaffold00029 934046 16 ACTTTCCTATTGCTAT ................ scaffold11038 ScafM SNP 0008.scaffold00029 934282 1 A T scaffold11038 ScafM INDEL 0008.scaffold00029 934431 28 ............................ ATGATCCTCATCCCAGGCGTAAGCCCTC scaffold11038 ScafM SNP 0008.scaffold00029 936628 1 G A scaffold11038 ScafM SNP 0008.scaffold00029 936860 1 T C scaffold11038 Both SNP 0008.scaffold00029 936994 1 A C scaffold11038 Both SNP 0008.scaffold00029 937344 1 T C scaffold11038 Both SNP 0008.scaffold00029 937407 1 C A scaffold11038 ReadM INDEL 0008.scaffold00029 937501 1 G . - ReadM INDEL 0008.scaffold00029 937530 1 A . - ReadM SNP 0008.scaffold00029 937590 1 A G - ScafM INDEL 0008.scaffold00029 940925 1 . A scaffold4225 ScafM SNP 0008.scaffold00029 941036 1 G A scaffold4225 ScafM SNP 0008.scaffold00029 941068 1 G A scaffold4225 ScafM SNP 0008.scaffold00029 941129 1 G A scaffold4225 ScafM SNP 0008.scaffold00029 941152 1 T C scaffold4225 ScafM SNP 0008.scaffold00029 941160 1 T A scaffold4225 ScafM SNP 0008.scaffold00029 941177 1 T C scaffold4225 ScafM SNP 0008.scaffold00029 941233 1 T C scaffold4225 ScafM SNP 0008.scaffold00029 941235 1 C A scaffold4225 ScafM SNP 0008.scaffold00029 941287 2 CA TG scaffold4225 ScafM SNP 0008.scaffold00029 941307 2 AT TC scaffold4225 ScafM SNP 0008.scaffold00029 941324 1 A G scaffold4225 ScafM SNP 0008.scaffold00029 941372 1 C T scaffold4225 ScafM INDEL 0008.scaffold00029 941380 1 . T scaffold4225 ScafM SNP 0008.scaffold00029 941401 1 A G scaffold4225 ScafM SNP 0008.scaffold00029 941440 1 G T scaffold4225 ScafM SNP 0008.scaffold00029 941446 1 T C scaffold4225 ScafM SNP 0008.scaffold00029 941448 1 A T scaffold4225 ScafM SNP 0008.scaffold00029 941498 1 G T scaffold4225 ReadM SNP 0008.scaffold00029 941516 1 A G - ScafM SNP 0008.scaffold00029 941516 1 A T scaffold4225 ScafM SNP 0008.scaffold00029 941519 1 A T scaffold4225 ScafM SNP 0008.scaffold00029 941523 1 G A scaffold4225 ScafM INDEL 0008.scaffold00029 945176 8 ........ TAGTTCCA scaffold12107 ScafM SNP 0008.scaffold00029 945369 1 A T scaffold12107 ScafM INDEL 0008.scaffold00029 945376 4 CAAG .... scaffold12107 Both SNP 0008.scaffold00029 945448 1 C T scaffold12107 ScafM SNP 0008.scaffold00029 945659 1 C G scaffold12107 ScafM SNP 0008.scaffold00029 945677 1 G A scaffold12107 ScafM SNP 0008.scaffold00029 945740 1 G C scaffold12107 ScafM SNP 0008.scaffold00029 945747 1 C G scaffold12107 ScafM SNP 0008.scaffold00029 945809 1 A G scaffold12107 ScafM SNP 0008.scaffold00029 945823 1 G A scaffold12107 ScafM SNP 0008.scaffold00029 945848 1 C G scaffold12107 ScafM SNP 0008.scaffold00029 945858 1 T C scaffold12107 ScafM SNP 0008.scaffold00029 945879 1 T A scaffold12107 ScafM INDEL 0008.scaffold00029 950006 1 . A scaffold37438 ReadM SNP 0008.scaffold00029 954724 1 A G - ReadM SNP 0008.scaffold00029 954986 1 T A - ReadM SNP 0008.scaffold00029 955025 1 C T - ReadM SNP 0008.scaffold00029 955985 1 T C - ReadM SNP 0008.scaffold00029 956467 1 C T - ReadM SNP 0008.scaffold00029 956842 1 T C - ReadM SNP 0008.scaffold00029 957063 1 A T - ReadM SNP 0008.scaffold00029 957198 1 G A - ReadM SNP 0008.scaffold00029 957610 1 G A - ReadM SNP 0008.scaffold00029 958351 1 C A - ReadM INDEL 0008.scaffold00029 959681 2 .. CC - ReadM SNP 0008.scaffold00029 959966 1 A T - ReadM SNP 0008.scaffold00029 960020 1 T C - ReadM SNP 0008.scaffold00029 960886 1 T G - ReadM INDEL 0008.scaffold00029 960997 3 ... CCT - ReadM SNP 0008.scaffold00029 961351 1 T A - ReadM SNP 0008.scaffold00029 961839 1 A T - ScafM SNP 0008.scaffold00029 966068 1 T G scaffold1223 ScafM SNP 0008.scaffold00029 966096 1 A G scaffold1223 ScafM SNP 0008.scaffold00029 966380 1 T A scaffold1223 Both SNP 0008.scaffold00029 967662 1 G C scaffold1223 Both INDEL 0008.scaffold00029 967691 1 . T scaffold1223 ReadM SNP 0008.scaffold00029 969528 1 C T - ReadM SNP 0008.scaffold00029 970129 1 G A - ReadM SNP 0008.scaffold00029 970346 1 C T - ReadM SNP 0008.scaffold00029 970654 1 T A - ReadM SNP 0008.scaffold00029 971018 1 T C - ReadM SNP 0008.scaffold00029 971038 1 A G - ReadM SNP 0008.scaffold00029 971551 1 G A - ReadM SNP 0008.scaffold00029 972018 1 G A - ReadM SNP 0008.scaffold00029 972436 1 G A - Both SNP 0008.scaffold00029 973126 1 A G scaffold1223 ReadM SNP 0008.scaffold00029 973411 1 A C - Both SNP 0008.scaffold00029 973752 1 C T scaffold1223 ReadM SNP 0008.scaffold00029 973878 1 C T - ReadM INDEL 0008.scaffold00029 974823 1 C . - ReadM SNP 0008.scaffold00029 974836 1 C A - ReadM SNP 0008.scaffold00029 975222 1 G T - ReadM SNP 0008.scaffold00029 975649 1 C T - ReadM SNP 0008.scaffold00029 976019 1 G A - ReadM INDEL 0008.scaffold00029 976592 1 T . - ReadM SNP 0008.scaffold00029 977082 1 G A - ReadM SNP 0008.scaffold00029 977177 1 G A - ReadM SNP 0008.scaffold00029 977401 1 G A - ReadM SNP 0008.scaffold00029 977515 1 T C - ReadM SNP 0008.scaffold00029 978032 1 G A - ScafM SNP 0008.scaffold00029 978211 1 A T scaffold1223 ReadM SNP 0008.scaffold00029 979959 1 T C - ReadM SNP 0008.scaffold00029 980199 1 T C - ReadM SNP 0008.scaffold00029 980716 1 T C - ScafM SNP 0008.scaffold00029 983011 1 T G scaffold1223 ScafM SNP 0008.scaffold00029 983637 1 A C scaffold1223 ScafM INDEL 0008.scaffold00029 983898 1 . A scaffold1223 Both SNP 0008.scaffold00029 984545 1 A C scaffold1223 Both SNP 0008.scaffold00029 984555 1 G A scaffold1223 ReadM SNP 0008.scaffold00029 987740 1 C A - ReadM SNP 0008.scaffold00029 987841 1 C T - ReadM SNP 0008.scaffold00029 988063 1 T C - ReadM SNP 0008.scaffold00029 988220 1 T G - ReadM SNP 0008.scaffold00029 988338 1 A C - ReadM SNP 0008.scaffold00029 988373 1 C A - ReadM SNP 0008.scaffold00029 988583 1 A G - ReadM SNP 0008.scaffold00029 989172 1 T C - ReadM SNP 0008.scaffold00029 989379 1 T C - ReadM SNP 0008.scaffold00029 989447 1 T G - ReadM INDEL 0008.scaffold00029 989586 1 A . - ReadM SNP 0008.scaffold00029 989609 1 C A - ReadM SNP 0008.scaffold00029 990266 1 T C - ReadM SNP 0008.scaffold00029 990275 1 C A - ReadM SNP 0008.scaffold00029 992717 1 T C - ReadM SNP 0008.scaffold00029 993128 1 A C - ReadM SNP 0008.scaffold00029 993207 1 A G - ReadM SNP 0008.scaffold00029 993671 1 A G - ReadM SNP 0008.scaffold00029 993875 1 T G - ReadM SNP 0008.scaffold00029 994459 1 G C - ReadM SNP 0008.scaffold00029 994674 1 A G - ReadM SNP 0008.scaffold00029 994703 1 G A - ReadM INDEL 0008.scaffold00029 995063 3 CAT ... - ReadM SNP 0008.scaffold00029 995158 1 A C - ReadM SNP 0008.scaffold00029 995222 1 T C - ReadM SNP 0008.scaffold00029 995278 1 A C - ReadM SNP 0008.scaffold00029 995608 1 T G - ReadM SNP 0008.scaffold00029 995688 1 G A - ReadM SNP 0008.scaffold00029 996004 1 T C - ReadM SNP 0008.scaffold00029 996264 1 T A - ReadM SNP 0008.scaffold00029 996319 1 A G - ReadM SNP 0008.scaffold00029 996733 1 A G - ReadM SNP 0008.scaffold00029 997052 1 T C - ReadM SNP 0008.scaffold00029 997291 1 C A - Both SNP 0008.scaffold00029 998059 1 A T scaffold1223 Both SNP 0008.scaffold00029 998347 1 A G scaffold1223 ReadM SNP 0008.scaffold00029 999480 1 A G - ReadM SNP 0008.scaffold00029 1000040 1 T C - ReadM SNP 0008.scaffold00029 1000500 1 G A - ScafM SNP 0008.scaffold00029 1001009 1 G T scaffold1223 ReadM SNP 0008.scaffold00029 1001891 1 A G - ReadM SNP 0008.scaffold00029 1002206 1 T C - ReadM SNP 0008.scaffold00029 1002562 1 G A - ReadM SNP 0008.scaffold00029 1002780 1 A G - ScafM SNP 0008.scaffold00029 1003249 2 CA AT scaffold1223 ScafM SNP 0008.scaffold00029 1008800 1 T C scaffold1223 Both SNP 0008.scaffold00029 1009145 1 A C scaffold1223 Both SNP 0008.scaffold00029 1009326 1 A G scaffold1223 ScafM SNP 0008.scaffold00029 1010362 1 C G scaffold1223 Both SNP 0008.scaffold00029 1010433 1 T A scaffold1223 ReadM SNP 0008.scaffold00029 1010488 1 C T - ScafM SNP 0008.scaffold00029 1011362 1 T C scaffold1223 ScafM SNP 0008.scaffold00029 1011552 1 A C scaffold1223 ScafM SNP 0008.scaffold00029 1011597 1 A G scaffold1223 Both SNP 0008.scaffold00029 1011679 1 A G scaffold1223 Both SNP 0008.scaffold00029 1012146 1 G T scaffold1223 ScafM SNP 0008.scaffold00029 1012419 1 T G scaffold1223 ScafM INDEL 0008.scaffold00029 1012794 5 CTCAT ..... scaffold1223 ScafM INDEL 0008.scaffold00029 1012835 2 .. TT scaffold1223 ScafM SNP 0008.scaffold00029 1013128 1 C T scaffold1223 ReadM SNP 0008.scaffold00029 1013275 1 C T - ReadM SNP 0008.scaffold00029 1013401 1 T G - ScafM INDEL 0008.scaffold00029 1013549 3 ... TAC scaffold1223 ReadM INDEL 0008.scaffold00029 1013564 3 ... TGT - Both SNP 0008.scaffold00029 1014378 1 A T scaffold1223 Both SNP 0008.scaffold00029 1014387 1 T A scaffold1223 Both SNP 0008.scaffold00029 1014459 1 G A scaffold1223 Both SNP 0008.scaffold00029 1014502 1 C A scaffold1223 ReadM INDEL 0008.scaffold00029 1014541 1 . T - Both SNP 0008.scaffold00029 1014769 1 A G scaffold1223 Both INDEL 0008.scaffold00029 1014891 1 . G scaffold1223 Both SNP 0008.scaffold00029 1014918 1 G A scaffold1223 Both SNP 0008.scaffold00029 1014949 1 C T scaffold1223 Both SNP 0008.scaffold00029 1014955 1 C T scaffold1223 Both SNP 0008.scaffold00029 1015074 1 A G scaffold1223 Both SNP 0008.scaffold00029 1015088 1 G C scaffold1223 Both INDEL 0008.scaffold00029 1015299 2 .. TC scaffold1223 Both INDEL 0008.scaffold00029 1015524 1 . T scaffold1223 ScafM SNP 0008.scaffold00029 1015948 1 G T scaffold1223 Both SNP 0008.scaffold00029 1017098 1 A G scaffold1223 ReadM SNP 0008.scaffold00029 1017253 1 C T - ReadM INDEL 0008.scaffold00029 1017808 2 .. GG - Both INDEL 0008.scaffold00029 1017809 2 .. GT scaffold1223 ScafM INDEL 0008.scaffold00029 1017820 5 ..... TATTA scaffold1223 Both SNP 0008.scaffold00029 1017912 1 T C scaffold1223 Both SNP 0008.scaffold00029 1017957 1 C A scaffold1223 ScafM SNP 0008.scaffold00029 1017965 1 A G scaffold1223 ScafM SNP 0008.scaffold00029 1017981 1 T A scaffold1223 ScafM SNP 0008.scaffold00029 1017983 1 C G scaffold1223 ScafM SNP 0008.scaffold00029 1018010 1 G C scaffold1223 ScafM SNP 0008.scaffold00029 1018032 1 G C scaffold1223 ScafM SNP 0008.scaffold00029 1018056 1 G T scaffold1223 ScafM INDEL 0008.scaffold00029 1018060 5 ..... TCGTA scaffold1223 Both SNP 0008.scaffold00029 1018133 1 G A scaffold1223 Both SNP 0008.scaffold00029 1018427 1 A T scaffold1223 ReadM SNP 0008.scaffold00029 1018441 1 T A - ScafM SNP 0008.scaffold00029 1018441 2 TC AA scaffold1223 Both SNP 0008.scaffold00029 1018738 1 G C scaffold1223 Both SNP 0008.scaffold00029 1018754 1 C T scaffold1223 Both SNP 0008.scaffold00029 1018807 1 T C scaffold1223 ScafM SNP 0008.scaffold00029 1019166 1 A G scaffold1223 ReadM SNP 0008.scaffold00029 1019475 1 A C - ReadM SNP 0008.scaffold00029 1019865 1 C A - ReadM SNP 0008.scaffold00029 1019998 1 C T - ReadM SNP 0008.scaffold00029 1020127 1 C T - ReadM SNP 0008.scaffold00029 1020301 1 A G - ReadM SNP 0008.scaffold00029 1020467 1 G A - ReadM SNP 0008.scaffold00029 1020514 1 C T - ReadM SNP 0008.scaffold00029 1020540 1 A G - ReadM SNP 0008.scaffold00029 1020568 1 T C - ReadM SNP 0008.scaffold00029 1020840 1 T C - ReadM SNP 0008.scaffold00029 1021737 1 T C - ReadM SNP 0008.scaffold00029 1022107 1 T A - ReadM SNP 0008.scaffold00029 1022882 1 C T - ReadM SNP 0008.scaffold00029 1023635 1 C A - ReadM SNP 0008.scaffold00029 1024167 1 G A - ReadM SNP 0008.scaffold00029 1024386 1 G A - ReadM SNP 0008.scaffold00029 1024633 1 C T - ReadM SNP 0008.scaffold00029 1024713 1 T C - ReadM SNP 0008.scaffold00029 1024814 1 C T - ReadM SNP 0008.scaffold00029 1024915 1 G A - ReadM SNP 0008.scaffold00029 1024928 1 A T - ReadM SNP 0008.scaffold00029 1024943 1 T C - ReadM INDEL 0008.scaffold00029 1025191 1 C . - ReadM SNP 0008.scaffold00029 1025225 1 G C - ReadM SNP 0008.scaffold00029 1025404 1 A G - ReadM INDEL 0008.scaffold00029 1025601 1 . G - ReadM INDEL 0008.scaffold00029 1026139 1 T . - ReadM SNP 0008.scaffold00029 1026267 1 A C - ReadM SNP 0008.scaffold00029 1026314 1 T A - ReadM SNP 0008.scaffold00029 1026657 1 G A - ReadM SNP 0008.scaffold00029 1026673 1 T A - ReadM SNP 0008.scaffold00029 1027559 1 A G - ReadM SNP 0008.scaffold00029 1027566 1 T C - ReadM SNP 0008.scaffold00029 1027573 1 G T - ReadM SNP 0008.scaffold00029 1027699 1 A G - ReadM SNP 0008.scaffold00029 1027820 1 G A - ReadM SNP 0008.scaffold00029 1027856 1 C A - ReadM SNP 0008.scaffold00029 1028912 1 C T - ReadM SNP 0008.scaffold00029 1028980 1 G T - ReadM SNP 0008.scaffold00029 1029069 1 G T - ReadM SNP 0008.scaffold00029 1029132 1 A T - ReadM SNP 0008.scaffold00029 1029234 1 C A - ReadM INDEL 0008.scaffold00029 1029744 1 A . - ReadM SNP 0008.scaffold00029 1029758 1 A T - ReadM SNP 0008.scaffold00029 1029778 1 T C - ReadM INDEL 0008.scaffold00029 1030333 1 . G - ReadM SNP 0008.scaffold00029 1030672 1 C G - ReadM SNP 0008.scaffold00029 1030761 1 T C - ReadM SNP 0008.scaffold00029 1031152 1 G A - ReadM SNP 0008.scaffold00029 1031872 1 A T - ReadM SNP 0008.scaffold00029 1031904 1 A C - ReadM SNP 0008.scaffold00029 1032502 1 T C - ReadM SNP 0008.scaffold00029 1032810 1 T C - ReadM SNP 0008.scaffold00029 1032924 1 C T - ReadM SNP 0008.scaffold00029 1033111 1 T C - ReadM SNP 0008.scaffold00029 1033161 1 C T - ReadM SNP 0008.scaffold00029 1033163 1 G T - ReadM SNP 0008.scaffold00029 1033850 1 G A - ReadM SNP 0008.scaffold00029 1033947 1 T G - ReadM SNP 0008.scaffold00029 1033983 1 A G - ReadM SNP 0008.scaffold00029 1034022 1 G A - ReadM SNP 0008.scaffold00029 1034762 1 T G - ReadM SNP 0008.scaffold00029 1034873 1 G A - ReadM SNP 0008.scaffold00029 1034914 1 G A - ReadM SNP 0008.scaffold00029 1034923 1 T C - ReadM SNP 0008.scaffold00029 1035613 1 A T - ReadM SNP 0008.scaffold00029 1035987 1 A G - ReadM SNP 0008.scaffold00029 1036013 1 G A - ReadM SNP 0008.scaffold00029 1036118 1 G A - ReadM SNP 0008.scaffold00029 1036743 1 A G - ReadM SNP 0008.scaffold00029 1037036 1 C A - ReadM SNP 0008.scaffold00029 1038049 1 T A - ReadM INDEL 0008.scaffold00029 1038134 2 TT .. - ReadM SNP 0008.scaffold00029 1038980 1 T C - ReadM SNP 0008.scaffold00029 1039030 1 C A - ReadM SNP 0008.scaffold00029 1039510 1 T C - ReadM SNP 0008.scaffold00029 1039664 1 A G - ReadM SNP 0008.scaffold00029 1041877 1 A T - ReadM SNP 0008.scaffold00029 1041939 1 T C - ReadM SNP 0008.scaffold00029 1041970 1 G A - ReadM SNP 0008.scaffold00029 1042181 1 T C - ReadM SNP 0008.scaffold00029 1042437 1 T G - ScafM SNP 0008.scaffold00029 1042887 1 C A scaffold1415 ScafM SNP 0008.scaffold00029 1042946 1 T A scaffold1415 Both SNP 0008.scaffold00029 1043005 1 C T scaffold1415 ReadM SNP 0008.scaffold00029 1043180 1 C T - ReadM SNP 0008.scaffold00029 1043263 1 C G - ReadM SNP 0008.scaffold00029 1043935 1 A G - ReadM SNP 0008.scaffold00029 1044014 1 T C - ReadM SNP 0008.scaffold00029 1044297 1 C T - ReadM SNP 0008.scaffold00029 1045204 1 T C - ReadM SNP 0008.scaffold00029 1045699 1 T G - ReadM SNP 0008.scaffold00029 1045788 1 A G - ReadM SNP 0008.scaffold00029 1045961 1 G T - ReadM SNP 0008.scaffold00029 1046350 1 G T - ReadM SNP 0008.scaffold00029 1046404 1 A T - Both SNP 0008.scaffold00029 1046526 1 T G scaffold1415 Both SNP 0008.scaffold00029 1046623 1 T C scaffold1415 ReadM INDEL 0008.scaffold00029 1046748 1 T . - ReadM SNP 0008.scaffold00029 1046852 1 C T - Both SNP 0008.scaffold00029 1047430 1 G A scaffold1415 ScafM SNP 0008.scaffold00029 1048005 1 C A scaffold1415 Both SNP 0008.scaffold00029 1048122 1 T C scaffold1415 ScafM SNP 0008.scaffold00029 1048349 1 A T scaffold1415 ScafM SNP 0008.scaffold00029 1048404 1 G C scaffold1415 Both SNP 0008.scaffold00029 1049121 1 G C scaffold1415 Both SNP 0008.scaffold00029 1049135 1 G A scaffold1415 ReadM SNP 0008.scaffold00029 1049669 1 G A - ReadM SNP 0008.scaffold00029 1049692 1 A G - ScafM INDEL 0008.scaffold00029 1050040 11 ATATTATTCCA ........... scaffold1415 Both SNP 0008.scaffold00029 1050255 1 T A scaffold1415 Both SNP 0008.scaffold00029 1050311 1 A T scaffold1415 ScafM SNP 0008.scaffold00029 1050625 1 A T scaffold1415 Both SNP 0008.scaffold00029 1050845 1 C G scaffold1415 Both SNP 0008.scaffold00029 1050865 1 A G scaffold1415 ScafM SNP 0008.scaffold00029 1051453 1 G A scaffold1415 ReadM SNP 0008.scaffold00029 1052072 1 T C - ReadM SNP 0008.scaffold00029 1052113 1 G T - ReadM SNP 0008.scaffold00029 1052143 1 G T - ReadM SNP 0008.scaffold00029 1052594 1 T G - ReadM SNP 0008.scaffold00029 1052596 1 T C - ReadM SNP 0008.scaffold00029 1052715 1 C A - ReadM SNP 0008.scaffold00029 1052733 1 C A - ReadM SNP 0008.scaffold00029 1052947 1 G A - ReadM SNP 0008.scaffold00029 1053160 1 A T - ReadM INDEL 0008.scaffold00029 1053222 1 . T - ReadM SNP 0008.scaffold00029 1053377 1 C A - ReadM SNP 0008.scaffold00029 1053487 1 C A - ReadM INDEL 0008.scaffold00029 1053502 1 . T - ReadM SNP 0008.scaffold00029 1053585 1 G A - ReadM INDEL 0008.scaffold00029 1053772 1 G . - ReadM SNP 0008.scaffold00029 1053793 1 T C - Both INDEL 0008.scaffold00029 1053976 3 ... TTT scaffold1415 ReadM SNP 0008.scaffold00029 1054127 1 C T - ReadM SNP 0008.scaffold00029 1054197 1 G T - ReadM SNP 0008.scaffold00029 1054257 1 A G - ReadM SNP 0008.scaffold00029 1054279 1 C T - ReadM SNP 0008.scaffold00029 1054433 1 C T - Both SNP 0008.scaffold00029 1054995 1 A C scaffold1415 Both SNP 0008.scaffold00029 1055013 1 C T scaffold1415 Both SNP 0008.scaffold00029 1055067 1 G C scaffold1415 Both SNP 0008.scaffold00029 1055185 1 C T scaffold1415 Both SNP 0008.scaffold00029 1055339 1 C A scaffold1415 Both SNP 0008.scaffold00029 1055477 1 G A scaffold1415 Both SNP 0008.scaffold00029 1055601 1 T C scaffold1415 Both SNP 0008.scaffold00029 1055729 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1055920 1 T G - ReadM SNP 0008.scaffold00029 1056059 1 G A - ReadM SNP 0008.scaffold00029 1056735 1 T C - ReadM SNP 0008.scaffold00029 1056759 1 G C - ReadM SNP 0008.scaffold00029 1056845 1 T C - ReadM SNP 0008.scaffold00029 1057128 1 G T - Both SNP 0008.scaffold00029 1057342 1 T C scaffold1415 Both SNP 0008.scaffold00029 1057398 1 A T scaffold1415 ReadM SNP 0008.scaffold00029 1057593 1 C G - ReadM SNP 0008.scaffold00029 1058184 1 G A - ReadM SNP 0008.scaffold00029 1058255 1 A T - Both SNP 0008.scaffold00029 1059265 1 A G scaffold1415 Both SNP 0008.scaffold00029 1059296 1 G C scaffold1415 Both SNP 0008.scaffold00029 1059754 1 T C scaffold1415 Both SNP 0008.scaffold00029 1059758 1 T G scaffold1415 Both SNP 0008.scaffold00029 1059845 1 T A scaffold1415 Both SNP 0008.scaffold00029 1059913 1 A G scaffold1415 ScafM INDEL 0008.scaffold00029 1060058 6 ...... CATTGG scaffold1415 Both SNP 0008.scaffold00029 1060079 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1060886 1 A . scaffold1415 ReadM SNP 0008.scaffold00029 1061074 1 C T - ScafM SNP 0008.scaffold00029 1061857 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1062332 1 C . scaffold1415 ScafM SNP 0008.scaffold00029 1062535 1 C T scaffold1415 Both SNP 0008.scaffold00029 1062788 1 A G scaffold1415 Both SNP 0008.scaffold00029 1062886 1 A G scaffold1415 ScafM SNP 0008.scaffold00029 1063165 1 G C scaffold1415 ReadM SNP 0008.scaffold00029 1064507 1 C T - ReadM SNP 0008.scaffold00029 1064626 1 A G - ReadM INDEL 0008.scaffold00029 1064668 1 . A - ReadM INDEL 0008.scaffold00029 1064795 1 G . - ReadM SNP 0008.scaffold00029 1065305 1 G A - ReadM SNP 0008.scaffold00029 1065442 1 A G - ReadM SNP 0008.scaffold00029 1065658 1 A G - ScafM SNP 0008.scaffold00029 1066000 1 C T scaffold1415 ScafM INDEL 0008.scaffold00029 1066543 9 TGAAACATA ......... scaffold1415 Both SNP 0008.scaffold00029 1066610 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1066813 1 T G - Both SNP 0008.scaffold00029 1067293 1 G C scaffold1415 ReadM SNP 0008.scaffold00029 1069428 1 G A - ReadM SNP 0008.scaffold00029 1069691 1 T A - ReadM SNP 0008.scaffold00029 1069825 1 G A - ReadM SNP 0008.scaffold00029 1069999 1 G A - ReadM SNP 0008.scaffold00029 1070110 1 A T - ReadM SNP 0008.scaffold00029 1070175 1 T G - ReadM SNP 0008.scaffold00029 1071536 1 C T - ReadM SNP 0008.scaffold00029 1071847 1 G A - ReadM SNP 0008.scaffold00029 1071863 1 G A - Both SNP 0008.scaffold00029 1072015 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1072115 1 A C - ReadM SNP 0008.scaffold00029 1072150 1 C T - ReadM SNP 0008.scaffold00029 1072272 1 G A - ReadM SNP 0008.scaffold00029 1072762 1 T C - ReadM SNP 0008.scaffold00029 1072811 1 C T - ScafM SNP 0008.scaffold00029 1073709 1 T C scaffold1415 Both SNP 0008.scaffold00029 1073996 1 A G scaffold1415 ScafM SNP 0008.scaffold00029 1074011 1 C A scaffold1415 Both SNP 0008.scaffold00029 1074065 1 G C scaffold1415 Both SNP 0008.scaffold00029 1074112 1 A G scaffold1415 Both SNP 0008.scaffold00029 1074163 1 T A scaffold1415 ReadM SNP 0008.scaffold00029 1074188 1 T C - ReadM SNP 0008.scaffold00029 1074280 1 G A - ReadM SNP 0008.scaffold00029 1074363 1 C T - ReadM SNP 0008.scaffold00029 1074387 1 C T - ReadM SNP 0008.scaffold00029 1074598 1 G A - ReadM SNP 0008.scaffold00029 1074960 1 C T - ReadM INDEL 0008.scaffold00029 1075300 2 .. TT - ReadM SNP 0008.scaffold00029 1075492 1 T C - ReadM SNP 0008.scaffold00029 1075660 1 G A - ReadM SNP 0008.scaffold00029 1075714 1 C T - ReadM SNP 0008.scaffold00029 1075850 1 A C - ReadM SNP 0008.scaffold00029 1075988 1 G A - Both SNP 0008.scaffold00029 1076046 1 T C scaffold1415 Both SNP 0008.scaffold00029 1076101 1 C A scaffold1415 ReadM INDEL 0008.scaffold00029 1076383 1 . T - ReadM SNP 0008.scaffold00029 1076446 1 C T - ReadM SNP 0008.scaffold00029 1076910 1 G T - ReadM SNP 0008.scaffold00029 1077525 1 T C - ReadM SNP 0008.scaffold00029 1077853 1 A G - ScafM SNP 0008.scaffold00029 1078597 1 T G scaffold1415 Both SNP 0008.scaffold00029 1078610 1 A C scaffold1415 Both SNP 0008.scaffold00029 1078716 1 A C scaffold1415 ScafM INDEL 0008.scaffold00029 1078718 2 AA .. scaffold1415 Both INDEL 0008.scaffold00029 1078955 1 A . scaffold1415 Both SNP 0008.scaffold00029 1079060 1 C T scaffold1415 Both INDEL 0008.scaffold00029 1079114 1 C . scaffold1415 Both SNP 0008.scaffold00029 1079380 1 T A scaffold1415 Both SNP 0008.scaffold00029 1080552 1 T C scaffold1415 Both SNP 0008.scaffold00029 1080561 1 T C scaffold1415 Both SNP 0008.scaffold00029 1081375 1 G T scaffold1415 ScafM INDEL 0008.scaffold00029 1081430 4 GATA .... scaffold1415 Both SNP 0008.scaffold00029 1083121 1 C G scaffold1415 Both SNP 0008.scaffold00029 1083646 1 G T scaffold1415 Both INDEL 0008.scaffold00029 1083737 2 AT .. scaffold1415 ReadM SNP 0008.scaffold00029 1084855 1 G A - Both SNP 0008.scaffold00029 1085035 1 C T scaffold1415 Both SNP 0008.scaffold00029 1085199 1 T C scaffold1415 ReadM SNP 0008.scaffold00029 1085387 1 G A - ReadM SNP 0008.scaffold00029 1085539 2 GT AC - ReadM SNP 0008.scaffold00029 1085559 1 T G - ReadM SNP 0008.scaffold00029 1085678 1 C A - ReadM SNP 0008.scaffold00029 1085772 1 A G - Both SNP 0008.scaffold00029 1085876 1 C T scaffold1415 ReadM SNP 0008.scaffold00029 1086157 1 A T - Both SNP 0008.scaffold00029 1086234 1 C G scaffold1415 Both SNP 0008.scaffold00029 1086492 1 T G scaffold1415 Both SNP 0008.scaffold00029 1086524 1 T G scaffold1415 Both SNP 0008.scaffold00029 1086568 1 A G scaffold1415 Both SNP 0008.scaffold00029 1086593 1 T C scaffold1415 Both SNP 0008.scaffold00029 1086595 1 G A scaffold1415 ReadM SNP 0008.scaffold00029 1086911 1 T G - ReadM SNP 0008.scaffold00029 1087071 1 T C - ReadM SNP 0008.scaffold00029 1087389 1 G A - ReadM SNP 0008.scaffold00029 1087556 1 G A - ReadM SNP 0008.scaffold00029 1087643 1 T C - ReadM SNP 0008.scaffold00029 1087725 1 T C - ReadM SNP 0008.scaffold00029 1088663 1 A T - ReadM SNP 0008.scaffold00029 1089196 1 A T - Both SNP 0008.scaffold00029 1089377 1 T C scaffold1415 Both SNP 0008.scaffold00029 1089441 1 C G scaffold1415 Both SNP 0008.scaffold00029 1089450 1 C T scaffold1415 Both SNP 0008.scaffold00029 1089612 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1089683 1 C T - ReadM SNP 0008.scaffold00029 1089791 1 G T - Both SNP 0008.scaffold00029 1090144 1 A G scaffold1415 Both SNP 0008.scaffold00029 1090458 1 C G scaffold1415 Both SNP 0008.scaffold00029 1090737 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1090780 1 A G - Both SNP 0008.scaffold00029 1090816 1 T A scaffold1415 Both SNP 0008.scaffold00029 1090879 1 A G scaffold1415 ScafM SNP 0008.scaffold00029 1090908 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1090929 1 . C scaffold1415 Both SNP 0008.scaffold00029 1091140 1 A G scaffold1415 Both SNP 0008.scaffold00029 1091269 1 G A scaffold1415 Both SNP 0008.scaffold00029 1091490 1 C T scaffold1415 ScafM SNP 0008.scaffold00029 1091522 1 A G scaffold1415 Both SNP 0008.scaffold00029 1091734 1 T C scaffold1415 Both SNP 0008.scaffold00029 1091785 1 T C scaffold1415 ReadM SNP 0008.scaffold00029 1092381 1 A G - Both SNP 0008.scaffold00029 1092555 1 A T scaffold1415 Both SNP 0008.scaffold00029 1092764 1 T C scaffold1415 Both SNP 0008.scaffold00029 1092794 1 T C scaffold1415 ReadM SNP 0008.scaffold00029 1093103 1 G A - Both SNP 0008.scaffold00029 1094011 1 A T scaffold1415 Both SNP 0008.scaffold00029 1094155 1 A C scaffold1415 ReadM SNP 0008.scaffold00029 1094494 1 T C - Both SNP 0008.scaffold00029 1094587 1 T C scaffold1415 Both SNP 0008.scaffold00029 1094617 1 G A scaffold1415 ScafM SNP 0008.scaffold00029 1095059 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1098405 1 G A - ReadM SNP 0008.scaffold00029 1099337 1 G A - Both INDEL 0008.scaffold00029 1099517 1 G . scaffold1415 Both SNP 0008.scaffold00029 1099702 1 T C scaffold1415 Both SNP 0008.scaffold00029 1100000 1 C T scaffold1415 Both SNP 0008.scaffold00029 1100020 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1100188 1 . T scaffold1415 Both SNP 0008.scaffold00029 1100672 1 G A scaffold1415 Both SNP 0008.scaffold00029 1100930 1 G A scaffold1415 ScafM SNP 0008.scaffold00029 1100956 1 T C scaffold1415 ScafM SNP 0008.scaffold00029 1100983 1 C T scaffold1415 Both SNP 0008.scaffold00029 1101029 1 A G scaffold1415 Both SNP 0008.scaffold00029 1101339 1 A G scaffold1415 Both SNP 0008.scaffold00029 1102037 1 A G scaffold1415 Both SNP 0008.scaffold00029 1102330 1 T A scaffold1415 ReadM SNP 0008.scaffold00029 1102655 1 A G - ReadM SNP 0008.scaffold00029 1103025 1 T C - ScafM SNP 0008.scaffold00029 1103959 1 A T scaffold1415 Both SNP 0008.scaffold00029 1104080 1 A G scaffold1415 Both SNP 0008.scaffold00029 1104292 1 C T scaffold1415 Both SNP 0008.scaffold00029 1104366 1 A G scaffold1415 Both SNP 0008.scaffold00029 1104960 1 C T scaffold1415 Both SNP 0008.scaffold00029 1105239 1 G A scaffold1415 Both SNP 0008.scaffold00029 1105725 1 T C scaffold1415 Both SNP 0008.scaffold00029 1106037 1 G T scaffold1415 Both SNP 0008.scaffold00029 1106528 1 A G scaffold1415 Both SNP 0008.scaffold00029 1106684 1 C A scaffold1415 Both SNP 0008.scaffold00029 1107393 1 T G scaffold1415 Both INDEL 0008.scaffold00029 1107465 1 T . scaffold1415 ScafM INDEL 0008.scaffold00029 1107565 17 AGAATAACGTGGTATGT ................. scaffold1415 Both SNP 0008.scaffold00029 1107965 1 G T scaffold1415 Both SNP 0008.scaffold00029 1108666 1 T C scaffold1415 Both SNP 0008.scaffold00029 1108948 1 A T scaffold1415 Both SNP 0008.scaffold00029 1109296 1 G T scaffold1415 ReadM SNP 0008.scaffold00029 1109824 1 T C - ReadM SNP 0008.scaffold00029 1109965 1 T C - ReadM SNP 0008.scaffold00029 1110572 1 A G - ReadM SNP 0008.scaffold00029 1111534 1 T G - Both SNP 0008.scaffold00029 1112001 1 C A scaffold1415 ScafM INDEL 0008.scaffold00029 1112009 5 AGTTG ..... scaffold1415 ReadM SNP 0008.scaffold00029 1112244 1 G C - ReadM SNP 0008.scaffold00029 1112294 1 A G - ReadM SNP 0008.scaffold00029 1112791 1 A G - ReadM SNP 0008.scaffold00029 1112794 1 C G - ReadM INDEL 0008.scaffold00029 1112865 1 . A - ReadM SNP 0008.scaffold00029 1113271 1 G A - ReadM SNP 0008.scaffold00029 1113553 1 C T - ReadM SNP 0008.scaffold00029 1113556 1 C T - ReadM SNP 0008.scaffold00029 1113661 1 G T - ReadM SNP 0008.scaffold00029 1114088 1 C T - ReadM SNP 0008.scaffold00029 1114339 1 C G - ReadM SNP 0008.scaffold00029 1115112 1 A G - Both SNP 0008.scaffold00029 1115740 1 T C scaffold1415 Both SNP 0008.scaffold00029 1115742 1 T C scaffold1415 ScafM INDEL 0008.scaffold00029 1117251 17 ................. CCCCCCCCCCCCCCCCG scaffold1415 Both SNP 0008.scaffold00029 1117441 1 T A scaffold1415 Both SNP 0008.scaffold00029 1117807 1 T G scaffold1415 Both SNP 0008.scaffold00029 1119382 1 T C scaffold1415 ScafM INDEL 0008.scaffold00029 1120305 39 ....................................... CCCGCGCTTAGTTATCAGCTGCCACTGTTCCCCCCCCCC scaffold1415 ScafM INDEL 0008.scaffold00029 1120307 1 . C scaffold1415 Both INDEL 0008.scaffold00029 1121007 1 T . scaffold1415 Both SNP 0008.scaffold00029 1121740 1 T C scaffold1415 Both SNP 0008.scaffold00029 1121824 1 C T scaffold1415 Both SNP 0008.scaffold00029 1122033 1 A G scaffold1415 Both SNP 0008.scaffold00029 1122043 1 T C scaffold1415 ReadM SNP 0008.scaffold00029 1122075 1 C T - ReadM SNP 0008.scaffold00029 1122091 1 A T - ReadM SNP 0008.scaffold00029 1122118 1 C T - Both SNP 0008.scaffold00029 1122366 1 A C scaffold1415 ReadM SNP 0008.scaffold00029 1122674 1 T C - ReadM SNP 0008.scaffold00029 1122845 1 T C - Both SNP 0008.scaffold00029 1123110 1 A G scaffold1415 Both SNP 0008.scaffold00029 1123690 1 T A scaffold1415 ReadM SNP 0008.scaffold00029 1124530 1 G T - ReadM SNP 0008.scaffold00029 1124916 1 A G - ReadM SNP 0008.scaffold00029 1125301 1 G A - ReadM SNP 0008.scaffold00029 1125314 1 A G - ScafM INDEL 0008.scaffold00029 1125909 1 A . scaffold1415 ScafM INDEL 0008.scaffold00029 1126092 1 A . scaffold1415 Both SNP 0008.scaffold00029 1127245 1 A T scaffold1415 Both SNP 0008.scaffold00029 1127436 1 T G scaffold1415 Both SNP 0008.scaffold00029 1127550 1 A G scaffold1415 Both SNP 0008.scaffold00029 1127588 1 T G scaffold1415 Both SNP 0008.scaffold00029 1127747 1 T C scaffold1415 ReadM INDEL 0008.scaffold00029 1128155 1 . A - ReadM SNP 0008.scaffold00029 1128170 1 C T - ReadM INDEL 0008.scaffold00029 1128256 1 A . - ScafM SNP 0008.scaffold00029 1128261 1 G T scaffold1415 Both SNP 0008.scaffold00029 1128569 1 A G scaffold1415 ScafM SNP 0008.scaffold00029 1128811 1 A G scaffold1415 ReadM SNP 0008.scaffold00029 1129268 1 G A - ScafM INDEL 0008.scaffold00029 1129662 4 GCTA .... scaffold1415 ReadM SNP 0008.scaffold00029 1130073 1 A C - ReadM SNP 0008.scaffold00029 1130127 1 C T - ReadM SNP 0008.scaffold00029 1130142 1 C T - ReadM INDEL 0008.scaffold00029 1130247 1 . A - Both SNP 0008.scaffold00029 1130367 1 A T scaffold1415 Both SNP 0008.scaffold00029 1130408 1 G A scaffold1415 Both SNP 0008.scaffold00029 1130453 1 T C scaffold1415 ScafM INDEL 0008.scaffold00029 1130847 12 CGTGTTGAGATC ............ scaffold1415 ScafM INDEL 0008.scaffold00029 1131175 2 TT .. scaffold1415 ScafM INDEL 0008.scaffold00029 1131200 1 . T scaffold1415 Both SNP 0008.scaffold00029 1131465 1 A G scaffold1415 Both SNP 0008.scaffold00029 1131823 1 T C scaffold1415 Both SNP 0008.scaffold00029 1132190 1 G A scaffold1415 Both SNP 0008.scaffold00029 1132255 1 G A scaffold1415 ReadM INDEL 0008.scaffold00029 1133003 2 .. CA - ScafM INDEL 0008.scaffold00029 1133003 3 ..T CAG scaffold1415 Both SNP 0008.scaffold00029 1133079 1 T G scaffold1415 Both SNP 0008.scaffold00029 1134175 1 G A scaffold1415 Both SNP 0008.scaffold00029 1134858 1 C T scaffold1415 Both SNP 0008.scaffold00029 1135888 1 T C scaffold1415 Both SNP 0008.scaffold00029 1136470 1 G C scaffold1415 Both SNP 0008.scaffold00029 1136663 1 G A scaffold1415 Both SNP 0008.scaffold00029 1136765 1 C T scaffold1415 Both SNP 0008.scaffold00029 1136776 1 T A scaffold1415 Both SNP 0008.scaffold00029 1137138 1 A C scaffold1415 Both SNP 0008.scaffold00029 1137224 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1137279 1 . A scaffold1415 ScafM SNP 0008.scaffold00029 1137576 1 C T scaffold1415 ScafM INDEL 0008.scaffold00029 1137602 4 CATA .... scaffold1415 Both SNP 0008.scaffold00029 1138480 1 C T scaffold1415 Both SNP 0008.scaffold00029 1138827 1 T C scaffold1415 ReadM SNP 0008.scaffold00029 1139548 1 C T - ScafM SNP 0008.scaffold00029 1140093 1 A C scaffold1415 ScafM SNP 0008.scaffold00029 1140328 1 T A scaffold1415 ScafM SNP 0008.scaffold00029 1140403 1 G T scaffold1415 Both INDEL 0008.scaffold00029 1140405 1 T . scaffold1415 Both SNP 0008.scaffold00029 1140733 1 C T scaffold1415 ReadM SNP 0008.scaffold00029 1141221 1 T C - ScafM INDEL 0008.scaffold00029 1142392 40 ........................................ GGAACTAGAGAGGCTCACGCAGGTTTTTCTTTATGGCTCG scaffold1415 Both INDEL 0008.scaffold00029 1143120 2 .. GT scaffold1415 Both SNP 0008.scaffold00029 1143745 1 G A scaffold1415 Both SNP 0008.scaffold00029 1145040 1 C A scaffold1415 Both SNP 0008.scaffold00029 1145103 1 G A scaffold1415 ScafM INDEL 0008.scaffold00029 1145186 11 ........... GTTGGGGGGGT scaffold1415 ScafM INDEL 0008.scaffold00029 1145834 17 ................. CAAACCCCCCCCCCCCC scaffold1415 ScafM SNP 0008.scaffold00029 1146308 1 A G scaffold1415 Both SNP 0008.scaffold00029 1147153 1 G A scaffold1415 Both SNP 0008.scaffold00029 1147561 1 T G scaffold1415 ScafM SNP 0008.scaffold00029 1148701 1 T G scaffold1415 ScafM SNP 0008.scaffold00029 1149225 1 A C scaffold1415 ScafM INDEL 0008.scaffold00029 1149236 2 .. AA scaffold1415 ScafM INDEL 0008.scaffold00029 1149535 6 ...... TGCTGT scaffold1415 Both SNP 0008.scaffold00029 1149660 1 C A scaffold1415 Both SNP 0008.scaffold00029 1151442 1 G T scaffold1415 Both SNP 0008.scaffold00029 1151483 1 T C scaffold1415 Both SNP 0008.scaffold00029 1152673 1 A G scaffold1415 Both SNP 0008.scaffold00029 1152854 1 T C scaffold1415 ScafM INDEL 0008.scaffold00029 1153286 7 AAGGGGG ....... scaffold1415 Both INDEL 0008.scaffold00029 1153405 1 C . scaffold1415 Both SNP 0008.scaffold00029 1153487 1 C T scaffold1415 ScafM INDEL 0008.scaffold00029 1154190 1 T . scaffold1415 Both INDEL 0008.scaffold00029 1154484 2 TG .. scaffold1415 Both INDEL 0008.scaffold00029 1154566 1 T . scaffold1415 ScafM INDEL 0008.scaffold00029 1154896 4 TTTT .... scaffold1415 ReadM SNP 0008.scaffold00029 1155259 1 G A - ReadM SNP 0008.scaffold00029 1155273 1 C T - Both SNP 0008.scaffold00029 1155282 1 C T scaffold1415 ReadM SNP 0008.scaffold00029 1155363 1 G A - ReadM SNP 0008.scaffold00029 1155831 1 C T - ReadM SNP 0008.scaffold00029 1155865 1 A G - ReadM SNP 0008.scaffold00029 1155922 1 T G - ReadM SNP 0008.scaffold00029 1157942 1 T C - ReadM SNP 0008.scaffold00029 1158124 1 G A - ReadM SNP 0008.scaffold00029 1158133 1 C T - ScafM SNP 0008.scaffold00029 1158589 1 G A scaffold7481 ReadM SNP 0008.scaffold00029 1158880 1 G A - ReadM SNP 0008.scaffold00029 1158962 1 G T - ReadM SNP 0008.scaffold00029 1158997 1 G T - ReadM SNP 0008.scaffold00029 1159311 1 T C - Both SNP 0008.scaffold00029 1159366 1 A G scaffold7481 ReadM SNP 0008.scaffold00029 1159625 1 T C - ReadM SNP 0008.scaffold00029 1159737 1 A G - Both INDEL 0008.scaffold00029 1159967 1 . A scaffold7481 Both SNP 0008.scaffold00029 1159996 1 T C scaffold7481 ReadM SNP 0008.scaffold00029 1160946 1 C T - ScafM SNP 0008.scaffold00029 1160990 1 A T scaffold7481 Both SNP 0008.scaffold00029 1161150 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1161504 1 A C scaffold7481 Both SNP 0008.scaffold00029 1161590 1 A G scaffold7481 Both SNP 0008.scaffold00029 1161754 1 G T scaffold7481 ReadM SNP 0008.scaffold00029 1161884 1 A T - ReadM SNP 0008.scaffold00029 1161927 1 G A - ReadM SNP 0008.scaffold00029 1161965 1 G A - ScafM SNP 0008.scaffold00029 1162143 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1162147 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1162195 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1162200 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1162233 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1162259 1 T C scaffold7481 ReadM SNP 0008.scaffold00029 1162433 1 T G - Both SNP 0008.scaffold00029 1162527 1 C T scaffold7481 Both SNP 0008.scaffold00029 1162535 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1162624 1 T C scaffold7481 Both SNP 0008.scaffold00029 1162653 1 G A scaffold7481 ReadM SNP 0008.scaffold00029 1162661 1 A G - ReadM INDEL 0008.scaffold00029 1162674 1 C . - ReadM SNP 0008.scaffold00029 1162925 1 A T - ReadM SNP 0008.scaffold00029 1162936 1 T C - ReadM SNP 0008.scaffold00029 1162988 1 G T - ScafM SNP 0008.scaffold00029 1163044 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1163046 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1163069 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1163114 1 . C scaffold7481 ScafM SNP 0008.scaffold00029 1163148 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1163156 1 . A scaffold7481 ScafM SNP 0008.scaffold00029 1163159 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1163214 38 CTTAACTCTACCCCTCAAAAAAAAAAAAAAAAAAGCTC ...................................... scaffold7481 ScafM INDEL 0008.scaffold00029 1163309 1 . A scaffold7481 ScafM SNP 0008.scaffold00029 1163322 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1163335 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1163340 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1163352 1 C A scaffold7481 ScafM INDEL 0008.scaffold00029 1163376 4 .... TCAC scaffold7481 ScafM SNP 0008.scaffold00029 1163387 2 AA TC scaffold7481 ScafM SNP 0008.scaffold00029 1163393 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1163401 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1163423 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1163725 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1163733 1 G T scaffold7481 ScafM INDEL 0008.scaffold00029 1163787 11 CCCCTTTTTTT ........... scaffold7481 ScafM SNP 0008.scaffold00029 1163823 1 T G scaffold7481 Both SNP 0008.scaffold00029 1163843 1 C T scaffold7481 Both SNP 0008.scaffold00029 1163861 1 A G scaffold7481 Both SNP 0008.scaffold00029 1163913 1 A G scaffold7481 Both SNP 0008.scaffold00029 1163961 1 G A scaffold7481 Both SNP 0008.scaffold00029 1163966 1 T C scaffold7481 Both SNP 0008.scaffold00029 1163986 1 A G scaffold7481 Both INDEL 0008.scaffold00029 1164062 1 T . scaffold7481 Both SNP 0008.scaffold00029 1164129 1 A T scaffold7481 Both SNP 0008.scaffold00029 1164136 1 C T scaffold7481 Both INDEL 0008.scaffold00029 1164169 1 A . scaffold7481 Both SNP 0008.scaffold00029 1164293 1 C T scaffold7481 Both SNP 0008.scaffold00029 1164350 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1164422 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1164424 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1164432 1 C T scaffold7481 ScafM INDEL 0008.scaffold00029 1164442 1 T . scaffold7481 Both SNP 0008.scaffold00029 1164490 1 G C scaffold7481 Both SNP 0008.scaffold00029 1164513 1 T G scaffold7481 Both SNP 0008.scaffold00029 1164618 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1164733 2 AT .. scaffold7481 ScafM SNP 0008.scaffold00029 1164743 1 G T scaffold7481 Both SNP 0008.scaffold00029 1164763 1 G A scaffold7481 Both SNP 0008.scaffold00029 1164792 1 G A scaffold7481 Both SNP 0008.scaffold00029 1164872 1 T A scaffold7481 Both SNP 0008.scaffold00029 1164918 1 G A scaffold7481 Both SNP 0008.scaffold00029 1164970 1 T A scaffold7481 ScafM INDEL 0008.scaffold00029 1165001 1 G . scaffold7481 ScafM SNP 0008.scaffold00029 1165005 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1165020 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1165043 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1165061 1 C T scaffold7481 ScafM INDEL 0008.scaffold00029 1165068 3 TTT ... scaffold7481 ScafM SNP 0008.scaffold00029 1165084 1 T C scaffold7481 Both SNP 0008.scaffold00029 1165089 1 C T scaffold7481 Both SNP 0008.scaffold00029 1165165 1 G T scaffold7481 Both SNP 0008.scaffold00029 1165237 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1165269 1 T A scaffold7481 Both INDEL 0008.scaffold00029 1165271 1 A . scaffold7481 Both SNP 0008.scaffold00029 1165306 1 G C scaffold7481 Both SNP 0008.scaffold00029 1165388 1 C G scaffold7481 Both SNP 0008.scaffold00029 1165434 1 C T scaffold7481 Both SNP 0008.scaffold00029 1165437 1 T G scaffold7481 Both SNP 0008.scaffold00029 1165445 1 G A scaffold7481 Both INDEL 0008.scaffold00029 1165512 1 . A scaffold7481 Both SNP 0008.scaffold00029 1165531 1 G A scaffold7481 Both SNP 0008.scaffold00029 1165563 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1165633 3 TGG CTC scaffold7481 ScafM SNP 0008.scaffold00029 1165668 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1165678 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1165711 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1165725 12 ............ GGCAATTTAAAG scaffold7481 ScafM SNP 0008.scaffold00029 1165734 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1165746 1 T C scaffold7481 Both INDEL 0008.scaffold00029 1165765 1 . T scaffold7481 Both SNP 0008.scaffold00029 1165826 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1165847 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1165861 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1165864 2 TT .G scaffold7481 ScafM INDEL 0008.scaffold00029 1165875 4 .... TCAC scaffold7481 ScafM SNP 0008.scaffold00029 1165914 1 T C scaffold7481 Both SNP 0008.scaffold00029 1165926 1 A G scaffold7481 Both SNP 0008.scaffold00029 1165936 1 G A scaffold7481 ReadM SNP 0008.scaffold00029 1166077 1 C T - ReadM SNP 0008.scaffold00029 1166144 1 G A - ReadM SNP 0008.scaffold00029 1166288 1 A G - ReadM SNP 0008.scaffold00029 1166432 1 A G - ReadM SNP 0008.scaffold00029 1166478 1 G A - ReadM SNP 0008.scaffold00029 1166568 1 A G - ReadM SNP 0008.scaffold00029 1166611 1 C T - ReadM INDEL 0008.scaffold00029 1166622 1 T . - ReadM SNP 0008.scaffold00029 1166635 1 G C - ReadM SNP 0008.scaffold00029 1166663 1 T C - ReadM SNP 0008.scaffold00029 1166752 1 T C - ReadM SNP 0008.scaffold00029 1166769 1 A C - ReadM SNP 0008.scaffold00029 1166784 1 G A - ReadM SNP 0008.scaffold00029 1166895 1 C A - ReadM SNP 0008.scaffold00029 1166939 1 C T - ReadM SNP 0008.scaffold00029 1166959 1 A T - ScafM SNP 0008.scaffold00029 1167051 2 TA CG scaffold7481 ScafM SNP 0008.scaffold00029 1167054 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1167062 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1167073 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1167088 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1167090 1 . T scaffold7481 ScafM SNP 0008.scaffold00029 1167093 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1167104 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1167116 3 AAA ... scaffold7481 ScafM SNP 0008.scaffold00029 1167139 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1167155 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1167163 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1167189 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1167221 1 A . scaffold7481 ScafM SNP 0008.scaffold00029 1167284 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1167286 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1167315 1 . T scaffold7481 ScafM INDEL 0008.scaffold00029 1167317 5 ..... CGAAC scaffold7481 ScafM INDEL 0008.scaffold00029 1167319 1 . G scaffold7481 ScafM SNP 0008.scaffold00029 1167323 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1167326 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1167338 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1167351 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1167369 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1167418 2 CC TG scaffold7481 ScafM SNP 0008.scaffold00029 1167422 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1167426 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1167428 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1167488 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1167492 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1167500 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1167508 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1167532 1 C T scaffold7481 Both SNP 0008.scaffold00029 1167606 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1167715 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1167739 2 .. TT scaffold7481 ScafM SNP 0008.scaffold00029 1167749 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1167804 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1167826 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1167854 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1167857 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1167880 1 . T scaffold7481 Both SNP 0008.scaffold00029 1167928 1 C T scaffold7481 Both SNP 0008.scaffold00029 1167982 1 A T scaffold7481 Both SNP 0008.scaffold00029 1168020 1 A G scaffold7481 Both SNP 0008.scaffold00029 1168075 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1168112 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1168117 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1168155 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1168177 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1168188 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1168207 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1168236 1 G C scaffold7481 Both SNP 0008.scaffold00029 1168263 1 G T scaffold7481 Both INDEL 0008.scaffold00029 1168268 1 . G scaffold7481 Both SNP 0008.scaffold00029 1168306 1 A G scaffold7481 Both SNP 0008.scaffold00029 1168363 1 G C scaffold7481 Both SNP 0008.scaffold00029 1168413 1 G T scaffold7481 Both SNP 0008.scaffold00029 1168467 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1168487 1 C T scaffold7481 ScafM INDEL 0008.scaffold00029 1168500 5 ..... TTGTT scaffold7481 ScafM SNP 0008.scaffold00029 1168542 1 C A scaffold7481 ScafM INDEL 0008.scaffold00029 1168554 4 .... CTTA scaffold7481 ScafM SNP 0008.scaffold00029 1168562 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1168573 1 C T scaffold7481 Both SNP 0008.scaffold00029 1168612 1 T G scaffold7481 Both SNP 0008.scaffold00029 1168634 1 T A scaffold7481 Both SNP 0008.scaffold00029 1168679 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1168716 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1168723 2 GA CG scaffold7481 ScafM SNP 0008.scaffold00029 1168738 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1168742 1 T A scaffold7481 Both SNP 0008.scaffold00029 1168833 1 T C scaffold7481 Both SNP 0008.scaffold00029 1168843 1 G T scaffold7481 Both INDEL 0008.scaffold00029 1168930 1 C . scaffold7481 Both SNP 0008.scaffold00029 1169003 1 G A scaffold7481 Both SNP 0008.scaffold00029 1169147 1 A T scaffold7481 Both SNP 0008.scaffold00029 1169249 1 A G scaffold7481 Both SNP 0008.scaffold00029 1169254 1 T G scaffold7481 Both SNP 0008.scaffold00029 1169277 1 T G scaffold7481 Both SNP 0008.scaffold00029 1169391 1 G A scaffold7481 Both SNP 0008.scaffold00029 1169402 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1169461 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1169468 2 GA TT scaffold7481 ScafM SNP 0008.scaffold00029 1169471 2 TA GT scaffold7481 Both SNP 0008.scaffold00029 1169559 1 G A scaffold7481 Both INDEL 0008.scaffold00029 1169650 2 TA .. scaffold7481 Both SNP 0008.scaffold00029 1169764 1 A G scaffold7481 Both SNP 0008.scaffold00029 1169856 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1169917 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1169923 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1169944 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1169946 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1170032 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1171069 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1171079 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1171108 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1171136 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1171143 1 C A scaffold7481 ScafM INDEL 0008.scaffold00029 1171146 1 C . scaffold7481 ScafM SNP 0008.scaffold00029 1171197 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1171235 1 T C scaffold7481 Both SNP 0008.scaffold00029 1171385 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1171436 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1171444 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1171451 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1171473 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1171514 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1171556 2 GC TT scaffold7481 ScafM SNP 0008.scaffold00029 1171572 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1171587 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1171801 1 . G scaffold15800 ScafM INDEL 0008.scaffold00029 1171837 2 TC .. scaffold15800 ScafM INDEL 0008.scaffold00029 1171871 6 CCACCT ...... scaffold15800 ScafM SNP 0008.scaffold00029 1171881 1 A G scaffold15800 ScafM INDEL 0008.scaffold00029 1171900 8 CAATTCTC ........ scaffold15800 ScafM INDEL 0008.scaffold00029 1171984 10 .......... TAACTCACCT scaffold15800 ScafM INDEL 0008.scaffold00029 1171988 8 ........ CAACAATT scaffold15800 ScafM INDEL 0008.scaffold00029 1171990 13 ............. CCACCACCACGAC scaffold15800 ScafM SNP 0008.scaffold00029 1171997 1 T C scaffold15800 ScafM SNP 0008.scaffold00029 1178885 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1178912 11 ........... TGCATTCTCTC scaffold7481 ScafM INDEL 0008.scaffold00029 1178956 4 .... TATT scaffold7481 ScafM SNP 0008.scaffold00029 1179045 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1179092 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1179095 1 C T scaffold7481 Both SNP 0008.scaffold00029 1179147 1 A G scaffold7481 Both SNP 0008.scaffold00029 1179185 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1181817 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1182051 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182060 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182084 1 G T scaffold7481 ScafM INDEL 0008.scaffold00029 1182113 27 ........................... TCTTTTGTCGTAAAGATCTTTGCTGGT scaffold7481 ScafM SNP 0008.scaffold00029 1182128 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182159 1 T A scaffold7481 Both SNP 0008.scaffold00029 1182238 1 G C scaffold7481 ScafM INDEL 0008.scaffold00029 1182284 1 . C scaffold7481 ScafM SNP 0008.scaffold00029 1182287 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182289 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182303 1 T A scaffold7481 ScafM INDEL 0008.scaffold00029 1182366 2 AA .. scaffold7481 ScafM SNP 0008.scaffold00029 1182370 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1182444 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1182457 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1182469 2 AG GA scaffold7481 ScafM SNP 0008.scaffold00029 1182519 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1182528 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1182554 2 GT AA scaffold7481 ScafM SNP 0008.scaffold00029 1182705 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182711 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1182732 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1182757 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1182766 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1182799 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1182825 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1182855 1 C A scaffold7481 Both SNP 0008.scaffold00029 1182900 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1182980 14 GACTGATGACTTGA .............. scaffold7481 ScafM INDEL 0008.scaffold00029 1182995 1 G . scaffold7481 ScafM SNP 0008.scaffold00029 1183036 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1183454 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1183459 1 C T scaffold7481 ScafM INDEL 0008.scaffold00029 1183504 15 TGAACAGTCATACTC ............... scaffold7481 ScafM SNP 0008.scaffold00029 1183524 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1183555 2 TC AG scaffold7481 ScafM SNP 0008.scaffold00029 1183582 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1183588 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1184020 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1184028 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1184035 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1184041 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1184077 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1184113 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1184127 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1184132 1 . T scaffold7481 Both SNP 0008.scaffold00029 1184186 1 T C scaffold7481 Both SNP 0008.scaffold00029 1184276 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1184295 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1184298 2 TA AG scaffold7481 ScafM SNP 0008.scaffold00029 1184434 1 A G scaffold7481 Both SNP 0008.scaffold00029 1184469 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1184556 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1184606 1 A G scaffold7481 Both INDEL 0008.scaffold00029 1185899 2 .. TC scaffold7481 Both SNP 0008.scaffold00029 1186373 1 G C scaffold7481 Both SNP 0008.scaffold00029 1186395 1 T C scaffold7481 Both SNP 0008.scaffold00029 1186423 1 C A scaffold7481 Both SNP 0008.scaffold00029 1186499 1 A G scaffold7481 Both SNP 0008.scaffold00029 1186513 1 T C scaffold7481 Both SNP 0008.scaffold00029 1186516 1 G A scaffold7481 Both SNP 0008.scaffold00029 1186602 1 C A scaffold7481 Both SNP 0008.scaffold00029 1186684 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1186713 2 CA AC scaffold7481 ScafM SNP 0008.scaffold00029 1186719 1 A T scaffold7481 ScafM INDEL 0008.scaffold00029 1186723 1 . A scaffold7481 ScafM SNP 0008.scaffold00029 1186746 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1186757 1 A G scaffold7481 Both SNP 0008.scaffold00029 1186768 1 C T scaffold7481 Both SNP 0008.scaffold00029 1186791 1 C T scaffold7481 Both SNP 0008.scaffold00029 1186796 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1186882 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1186892 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1186899 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1186901 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1186914 1 T C scaffold7481 Both SNP 0008.scaffold00029 1186974 1 G A scaffold7481 Both SNP 0008.scaffold00029 1186982 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1187055 1 C T scaffold7481 ScafM INDEL 0008.scaffold00029 1187057 2 AC .. scaffold7481 Both SNP 0008.scaffold00029 1187098 1 T C scaffold7481 Both INDEL 0008.scaffold00029 1187140 1 . G scaffold7481 ScafM SNP 0008.scaffold00029 1187170 2 TG CA scaffold7481 ScafM SNP 0008.scaffold00029 1187180 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1187207 1 A C scaffold7481 ScafM INDEL 0008.scaffold00029 1187221 25 ......................... AGGTGTATGTTGGCAAACTTGAAAG scaffold7481 ScafM SNP 0008.scaffold00029 1187233 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1187247 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1187262 2 .C GG scaffold7481 ScafM SNP 0008.scaffold00029 1187274 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1187301 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1187325 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1187350 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1187356 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1187365 2 TT GA scaffold7481 ScafM SNP 0008.scaffold00029 1187463 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1187571 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1187610 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1187642 1 G A scaffold7481 ReadM INDEL 0008.scaffold00029 1188211 1 . A - ReadM SNP 0008.scaffold00029 1188256 1 T C - ScafM SNP 0008.scaffold00029 1189044 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1189065 1 T A scaffold7481 Both SNP 0008.scaffold00029 1189121 1 T C scaffold7481 Both SNP 0008.scaffold00029 1189176 1 C T scaffold7481 Both SNP 0008.scaffold00029 1189203 1 C A scaffold7481 Both SNP 0008.scaffold00029 1189324 1 T A scaffold7481 ScafM INDEL 0008.scaffold00029 1189344 7 ....... GTTTTTT scaffold7481 ScafM SNP 0008.scaffold00029 1189381 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1189395 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1189400 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1189444 1 G A scaffold7481 Both SNP 0008.scaffold00029 1189479 1 C A scaffold7481 Both INDEL 0008.scaffold00029 1189553 1 . C scaffold7481 Both SNP 0008.scaffold00029 1189587 1 A G scaffold7481 Both SNP 0008.scaffold00029 1189637 1 T A scaffold7481 Both SNP 0008.scaffold00029 1189659 1 T A scaffold7481 Both SNP 0008.scaffold00029 1189706 1 C T scaffold7481 Both SNP 0008.scaffold00029 1189734 1 A T scaffold7481 Both SNP 0008.scaffold00029 1189746 1 G C scaffold7481 Both SNP 0008.scaffold00029 1189774 1 G A scaffold7481 Both SNP 0008.scaffold00029 1189782 1 A G scaffold7481 Both SNP 0008.scaffold00029 1189872 1 A G scaffold7481 Both SNP 0008.scaffold00029 1189896 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1189935 11 TTATCAGTTTG ........... scaffold7481 Both SNP 0008.scaffold00029 1190024 1 T G scaffold7481 Both SNP 0008.scaffold00029 1190076 1 C G scaffold7481 Both SNP 0008.scaffold00029 1190105 1 A C scaffold7481 Both SNP 0008.scaffold00029 1190227 1 G A scaffold7481 Both SNP 0008.scaffold00029 1190254 1 A T scaffold7481 Both SNP 0008.scaffold00029 1190279 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1190297 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1190312 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1190350 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1190354 3 ... ATT scaffold7481 ScafM SNP 0008.scaffold00029 1190371 1 T C scaffold7481 Both SNP 0008.scaffold00029 1190408 1 C T scaffold7481 Both SNP 0008.scaffold00029 1190429 1 G T scaffold7481 ScafM INDEL 0008.scaffold00029 1190484 3 TAT ... scaffold7481 ScafM SNP 0008.scaffold00029 1190489 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1190491 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1190562 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1190565 2 GG CT scaffold7481 ScafM SNP 0008.scaffold00029 1190589 1 C A scaffold7481 ScafM INDEL 0008.scaffold00029 1190594 1 . A scaffold7481 ScafM INDEL 0008.scaffold00029 1190596 3 ... TCA scaffold7481 ScafM SNP 0008.scaffold00029 1190608 2 AC GT scaffold7481 ScafM SNP 0008.scaffold00029 1190612 1 T A scaffold7481 ScafM INDEL 0008.scaffold00029 1190625 6 CTAACA ...... scaffold7481 ScafM SNP 0008.scaffold00029 1190633 1 A T scaffold7481 Both SNP 0008.scaffold00029 1190677 1 G T scaffold7481 Both SNP 0008.scaffold00029 1190687 1 G A scaffold7481 Both SNP 0008.scaffold00029 1190746 1 T A scaffold7481 Both SNP 0008.scaffold00029 1190850 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1190882 3 ACG ... scaffold7481 Both SNP 0008.scaffold00029 1190910 1 T C scaffold7481 Both SNP 0008.scaffold00029 1190947 1 T A scaffold7481 Both SNP 0008.scaffold00029 1191290 1 T C scaffold7481 Both SNP 0008.scaffold00029 1191470 1 A G scaffold7481 Both SNP 0008.scaffold00029 1191603 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1191636 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1191642 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1191650 1 T C scaffold7481 Both SNP 0008.scaffold00029 1191682 1 T C scaffold7481 Both SNP 0008.scaffold00029 1191700 1 G A scaffold7481 Both SNP 0008.scaffold00029 1191764 1 G A scaffold7481 Both SNP 0008.scaffold00029 1191774 1 C G scaffold7481 Both SNP 0008.scaffold00029 1191869 1 A T scaffold7481 ScafM INDEL 0008.scaffold00029 1191950 2 TG .. scaffold7481 ScafM SNP 0008.scaffold00029 1191955 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1191967 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1191969 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1191975 1 . A scaffold7481 ScafM SNP 0008.scaffold00029 1191982 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1191987 1 G C scaffold7481 ScafM SNP 0008.scaffold00029 1191997 1 G T scaffold7481 Both SNP 0008.scaffold00029 1192052 1 G A scaffold7481 Both SNP 0008.scaffold00029 1192066 1 A G scaffold7481 Both SNP 0008.scaffold00029 1192119 1 A G scaffold7481 Both SNP 0008.scaffold00029 1192227 1 G A scaffold7481 Both SNP 0008.scaffold00029 1192242 1 G T scaffold7481 Both SNP 0008.scaffold00029 1192254 1 A T scaffold7481 Both INDEL 0008.scaffold00029 1192290 1 T . scaffold7481 Both SNP 0008.scaffold00029 1192300 1 A G scaffold7481 ReadM SNP 0008.scaffold00029 1192358 1 A G - ReadM SNP 0008.scaffold00029 1192454 1 T G - ReadM SNP 0008.scaffold00029 1192488 1 T C - ReadM SNP 0008.scaffold00029 1192728 1 G A - ReadM SNP 0008.scaffold00029 1192733 1 C G - ReadM INDEL 0008.scaffold00029 1192763 1 T . - ReadM SNP 0008.scaffold00029 1192803 1 C T - ReadM SNP 0008.scaffold00029 1192813 1 T C - ReadM SNP 0008.scaffold00029 1192953 1 T G - ReadM SNP 0008.scaffold00029 1192982 1 A G - ReadM SNP 0008.scaffold00029 1193020 1 C T - ReadM SNP 0008.scaffold00029 1193055 1 A G - ReadM SNP 0008.scaffold00029 1193147 1 G A - ReadM SNP 0008.scaffold00029 1193335 1 A G - ReadM SNP 0008.scaffold00029 1193438 1 T G - ReadM SNP 0008.scaffold00029 1193473 1 G A - ReadM SNP 0008.scaffold00029 1193600 1 T C - ReadM SNP 0008.scaffold00029 1193630 1 C T - ReadM SNP 0008.scaffold00029 1193641 1 G A - Both INDEL 0008.scaffold00029 1193727 2 AT .. scaffold7481 ScafM SNP 0008.scaffold00029 1193733 1 G A scaffold7481 ReadM SNP 0008.scaffold00029 1194234 1 T C - ReadM SNP 0008.scaffold00029 1194258 1 A G - ReadM SNP 0008.scaffold00029 1194348 1 A G - ReadM SNP 0008.scaffold00029 1194373 1 T C - ReadM SNP 0008.scaffold00029 1194398 1 A G - ReadM SNP 0008.scaffold00029 1194412 1 A T - ReadM SNP 0008.scaffold00029 1194577 1 C T - ReadM SNP 0008.scaffold00029 1194648 1 C T - ReadM SNP 0008.scaffold00029 1194759 1 A G - ReadM SNP 0008.scaffold00029 1194801 1 A C - ReadM SNP 0008.scaffold00029 1194836 1 A T - ReadM SNP 0008.scaffold00029 1194879 1 T A - ReadM SNP 0008.scaffold00029 1194946 1 G A - ReadM INDEL 0008.scaffold00029 1194949 1 . T - ReadM SNP 0008.scaffold00029 1195043 1 G A - ReadM SNP 0008.scaffold00029 1195065 1 T C - ScafM SNP 0008.scaffold00029 1195124 1 T A scaffold7481 ScafM SNP 0008.scaffold00029 1195146 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1195160 8 TGTTTATG ........ scaffold7481 ScafM INDEL 0008.scaffold00029 1195171 5 CTTCT ..... scaffold7481 ScafM SNP 0008.scaffold00029 1195178 1 T A scaffold7481 ScafM INDEL 0008.scaffold00029 1195182 2 AC .. scaffold7481 ReadM SNP 0008.scaffold00029 1195413 1 T C - ReadM SNP 0008.scaffold00029 1195449 1 C T - ReadM SNP 0008.scaffold00029 1195467 1 T A - Both SNP 0008.scaffold00029 1195567 1 T G scaffold7481 Both SNP 0008.scaffold00029 1195572 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1195612 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1195626 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1195687 1 T A scaffold7481 Both SNP 0008.scaffold00029 1195697 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1195781 1 T C scaffold7481 ScafM INDEL 0008.scaffold00029 1195796 8 ........ AAAAAAAC scaffold7481 ScafM SNP 0008.scaffold00029 1195804 1 A T scaffold7481 ScafM INDEL 0008.scaffold00029 1195814 1 G . scaffold7481 ScafM SNP 0008.scaffold00029 1195844 1 C T scaffold7481 Both SNP 0008.scaffold00029 1195853 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1195943 2 AA .. scaffold7481 ScafM INDEL 0008.scaffold00029 1195969 10 .......... TTGTCATATC scaffold7481 ScafM SNP 0008.scaffold00029 1195987 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1195993 1 A G scaffold7481 ReadM SNP 0008.scaffold00029 1196268 1 T C - ReadM SNP 0008.scaffold00029 1196272 1 C A - ReadM SNP 0008.scaffold00029 1197315 1 T C - ReadM SNP 0008.scaffold00029 1198593 1 T C - ReadM SNP 0008.scaffold00029 1198621 1 A C - ReadM SNP 0008.scaffold00029 1198664 1 T C - ReadM SNP 0008.scaffold00029 1198945 1 C T - ScafM SNP 0008.scaffold00029 1198988 1 C A scaffold7481 ScafM SNP 0008.scaffold00029 1199028 2 TT CA scaffold7481 ScafM SNP 0008.scaffold00029 1199035 1 A T scaffold7481 Both SNP 0008.scaffold00029 1199083 1 A G scaffold7481 Both SNP 0008.scaffold00029 1199135 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1199182 1 A C scaffold7481 ScafM INDEL 0008.scaffold00029 1199188 6 TTGGAA ...... scaffold7481 ScafM INDEL 0008.scaffold00029 1199214 27 CCCCTCACATTGTATGTGATAAGCTTC ........................... scaffold7481 ScafM INDEL 0008.scaffold00029 1199242 1 T . scaffold7481 ScafM SNP 0008.scaffold00029 1199249 1 A T scaffold7481 ScafM SNP 0008.scaffold00029 1199258 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1199273 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1199335 1 C A scaffold7481 Both INDEL 0008.scaffold00029 1199379 1 C . scaffold7481 Both SNP 0008.scaffold00029 1199418 1 C T scaffold7481 Both SNP 0008.scaffold00029 1199444 1 A C scaffold7481 Both SNP 0008.scaffold00029 1199509 1 G C scaffold7481 Both SNP 0008.scaffold00029 1199597 1 A T scaffold7481 Both SNP 0008.scaffold00029 1199690 1 A C scaffold7481 Both SNP 0008.scaffold00029 1199765 1 T C scaffold7481 Both SNP 0008.scaffold00029 1199788 1 T C scaffold7481 Both SNP 0008.scaffold00029 1199795 1 G C scaffold7481 Both SNP 0008.scaffold00029 1199901 1 C T scaffold7481 Both SNP 0008.scaffold00029 1199937 1 G A scaffold7481 Both SNP 0008.scaffold00029 1199957 1 C T scaffold7481 Both SNP 0008.scaffold00029 1200035 1 G A scaffold7481 Both SNP 0008.scaffold00029 1200039 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1200060 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1200071 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1200073 1 A C scaffold7481 ScafM SNP 0008.scaffold00029 1200097 1 G A scaffold7481 ScafM INDEL 0008.scaffold00029 1200106 3 GGC ... scaffold7481 ScafM SNP 0008.scaffold00029 1200154 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1200157 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1200172 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1200180 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1200229 1 C G scaffold7481 ScafM INDEL 0008.scaffold00029 1200249 2 .. AT scaffold7481 ScafM INDEL 0008.scaffold00029 1200251 1 . T scaffold7481 ScafM SNP 0008.scaffold00029 1200256 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1200259 1 T G scaffold7481 Both SNP 0008.scaffold00029 1200295 1 T C scaffold7481 Both SNP 0008.scaffold00029 1200316 1 A C scaffold7481 Both SNP 0008.scaffold00029 1200426 1 C G scaffold7481 Both SNP 0008.scaffold00029 1200428 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1200499 2 AA TT scaffold7481 ScafM SNP 0008.scaffold00029 1200520 1 A G scaffold7481 ReadM SNP 0008.scaffold00029 1200890 1 A G - ReadM SNP 0008.scaffold00029 1200897 1 C T - ScafM SNP 0008.scaffold00029 1200934 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1200974 1 C T scaffold7481 ScafM SNP 0008.scaffold00029 1200986 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1201019 1 T C scaffold7481 ScafM SNP 0008.scaffold00029 1201022 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1201025 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1201060 1 G T scaffold7481 ScafM INDEL 0008.scaffold00029 1201098 3 AAC ... scaffold7481 ScafM SNP 0008.scaffold00029 1201102 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1201105 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1201183 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1201195 8 ........ TGGGGTTT scaffold7481 ScafM SNP 0008.scaffold00029 1201236 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1201249 1 A G scaffold7481 Both SNP 0008.scaffold00029 1201352 1 G T scaffold7481 Both SNP 0008.scaffold00029 1201418 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1201529 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1201537 2 TG CA scaffold7481 ScafM SNP 0008.scaffold00029 1201545 1 A G scaffold7481 ScafM SNP 0008.scaffold00029 1201737 2 GC TT scaffold7481 ScafM SNP 0008.scaffold00029 1201756 1 T G scaffold7481 ScafM SNP 0008.scaffold00029 1201783 1 C G scaffold7481 ScafM SNP 0008.scaffold00029 1201790 1 G A scaffold7481 ScafM SNP 0008.scaffold00029 1201801 1 A G scaffold7481 ScafM INDEL 0008.scaffold00029 1201820 1 . C scaffold7481 ScafM SNP 0008.scaffold00029 1201826 1 G T scaffold7481 ScafM SNP 0008.scaffold00029 1201832 1 G A scaffold7481 ReadM SNP 0008.scaffold00029 1201876 1 C G - ReadM SNP 0008.scaffold00029 1201891 1 C A - ReadM SNP 0008.scaffold00029 1201921 1 C T - ScafM SNP 0008.scaffold00029 1203030 1 C A scaffold690 ScafM SNP 0008.scaffold00029 1203055 1 C T scaffold690 Both SNP 0008.scaffold00029 1203167 1 C T scaffold690 Both SNP 0008.scaffold00029 1203287 1 G A scaffold690 Both SNP 0008.scaffold00029 1203309 1 C T scaffold690 Both SNP 0008.scaffold00029 1203318 1 C T scaffold690 Both SNP 0008.scaffold00029 1203432 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1203514 1 A T scaffold690 ScafM INDEL 0008.scaffold00029 1203557 3 ATA ... scaffold690 ScafM INDEL 0008.scaffold00029 1203562 1 G . scaffold690 Both SNP 0008.scaffold00029 1203667 1 A T scaffold690 ScafM SNP 0008.scaffold00029 1203828 1 T C scaffold690 ScafM INDEL 0008.scaffold00029 1203866 1 . A scaffold690 ScafM SNP 0008.scaffold00029 1203881 1 G T scaffold690 ScafM INDEL 0008.scaffold00029 1203979 28 ............................ GCTTTGTTCACCAAAAAAATAAAATTCA scaffold690 ScafM INDEL 0008.scaffold00029 1203980 1 . T scaffold690 ScafM SNP 0008.scaffold00029 1204047 1 C G scaffold690 ScafM SNP 0008.scaffold00029 1204126 1 A G scaffold690 ScafM INDEL 0008.scaffold00029 1204156 11 CTTTTTGGTTT ........... scaffold690 ScafM SNP 0008.scaffold00029 1204262 1 T A scaffold690 Both SNP 0008.scaffold00029 1204305 1 T C scaffold690 ScafM SNP 0008.scaffold00029 1204445 1 G T scaffold690 ScafM SNP 0008.scaffold00029 1204474 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204480 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204483 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204621 1 G A scaffold690 ScafM SNP 0008.scaffold00029 1204626 1 A T scaffold690 ScafM INDEL 0008.scaffold00029 1204632 1 T . scaffold690 ScafM SNP 0008.scaffold00029 1204659 1 T A scaffold690 ScafM SNP 0008.scaffold00029 1204675 1 T C scaffold690 ScafM SNP 0008.scaffold00029 1204698 1 A C scaffold690 ScafM INDEL 0008.scaffold00029 1204725 3 ... TTT scaffold690 ScafM SNP 0008.scaffold00029 1204756 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204765 1 C G scaffold690 ScafM SNP 0008.scaffold00029 1204772 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204774 1 G C scaffold690 ScafM INDEL 0008.scaffold00029 1204779 1 . G scaffold690 ScafM SNP 0008.scaffold00029 1204791 1 C A scaffold690 ScafM SNP 0008.scaffold00029 1204806 1 G A scaffold690 ScafM SNP 0008.scaffold00029 1204813 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204828 1 A T scaffold690 ScafM SNP 0008.scaffold00029 1204830 1 G T scaffold690 ScafM SNP 0008.scaffold00029 1204856 1 C A scaffold690 ScafM SNP 0008.scaffold00029 1204872 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204882 1 T G scaffold690 ScafM SNP 0008.scaffold00029 1204891 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1204897 1 G C scaffold690 ScafM SNP 0008.scaffold00029 1204929 1 A C scaffold690 ScafM SNP 0008.scaffold00029 1204975 1 A T scaffold690 ScafM INDEL 0008.scaffold00029 1205293 13 ............. CATTACAACATTT scaffold690 ScafM INDEL 0008.scaffold00029 1205345 2 .A GG scaffold690 ScafM SNP 0008.scaffold00029 1205353 1 A G scaffold690 ScafM INDEL 0008.scaffold00029 1205355 1 C . scaffold690 ScafM INDEL 0008.scaffold00029 1205358 1 A . scaffold690 ScafM INDEL 0008.scaffold00029 1205371 1 T . scaffold690 ScafM SNP 0008.scaffold00029 1205380 1 A T scaffold690 ScafM INDEL 0008.scaffold00029 1205407 1 . T scaffold690 Both SNP 0008.scaffold00029 1205571 1 T C scaffold690 Both SNP 0008.scaffold00029 1205597 1 G A scaffold690 ScafM INDEL 0008.scaffold00029 1205762 27 ........................... GGTTGTGGTGGTGGTGTTGGTGGTTGT scaffold690 ReadM SNP 0008.scaffold00029 1205777 1 C T - Both SNP 0008.scaffold00029 1206011 1 A G scaffold690 Both INDEL 0008.scaffold00029 1206151 1 C . scaffold690 ScafM SNP 0008.scaffold00029 1206153 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1206163 1 A T scaffold690 Both SNP 0008.scaffold00029 1206219 1 T G scaffold690 ScafM SNP 0008.scaffold00029 1206396 1 G A scaffold690 ScafM SNP 0008.scaffold00029 1206413 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1206419 1 T A scaffold690 ScafM SNP 0008.scaffold00029 1206425 1 C G scaffold690 Both SNP 0008.scaffold00029 1206484 1 G T scaffold690 Both SNP 0008.scaffold00029 1206500 1 A C scaffold690 Both SNP 0008.scaffold00029 1206562 1 A G scaffold690 ScafM SNP 0008.scaffold00029 1206640 1 C G scaffold690 ScafM SNP 0008.scaffold00029 1206721 1 A T scaffold690 ScafM SNP 0008.scaffold00029 1206822 1 C T scaffold690 ScafM SNP 0008.scaffold00029 1206974 1 T A scaffold690 ReadM INDEL 0008.scaffold00029 1207510 1 C . - ReadM SNP 0008.scaffold00029 1207570 1 T A - ReadM SNP 0008.scaffold00029 1207730 1 C T - ReadM SNP 0008.scaffold00029 1207865 1 T C - ReadM SNP 0008.scaffold00029 1207905 1 T G - ReadM SNP 0008.scaffold00029 1207993 1 A G - ReadM SNP 0008.scaffold00029 1208510 1 T A - Both SNP 0008.scaffold00029 1208656 1 A T scaffold5748 Both SNP 0008.scaffold00029 1208678 1 T A scaffold5748 ReadM SNP 0008.scaffold00029 1208744 1 A T - ReadM SNP 0008.scaffold00029 1208781 1 G A - ReadM INDEL 0008.scaffold00029 1208999 1 . G - Both SNP 0008.scaffold00029 1209438 1 G A scaffold5748 Both SNP 0008.scaffold00029 1209638 1 T C scaffold5748 ReadM INDEL 0008.scaffold00029 1209801 1 C . - ScafM SNP 0008.scaffold00029 1209845 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1209895 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1209910 1 A . scaffold5748 ScafM INDEL 0008.scaffold00029 1209939 2 AA .T scaffold5748 Both SNP 0008.scaffold00029 1210132 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1210173 2 .. AT scaffold5748 Both SNP 0008.scaffold00029 1210214 1 G A scaffold5748 Both SNP 0008.scaffold00029 1210402 1 A G scaffold5748 Both SNP 0008.scaffold00029 1210447 1 C T scaffold5748 Both SNP 0008.scaffold00029 1210525 1 T C scaffold5748 Both SNP 0008.scaffold00029 1210561 1 A G scaffold5748 Both SNP 0008.scaffold00029 1210568 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1210665 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1210667 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1210677 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1210685 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1210847 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1210944 3 TAT ... scaffold5748 ScafM SNP 0008.scaffold00029 1210991 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1211045 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1211088 1 C G scaffold5748 Both SNP 0008.scaffold00029 1211093 1 C A scaffold5748 Both SNP 0008.scaffold00029 1211130 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1211146 1 A . scaffold5748 Both SNP 0008.scaffold00029 1211224 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1211253 1 C G scaffold5748 ScafM SNP 0008.scaffold00029 1211315 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1211358 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1211437 1 T C scaffold5748 Both SNP 0008.scaffold00029 1211684 1 G T scaffold5748 Both SNP 0008.scaffold00029 1211871 1 A G scaffold5748 Both SNP 0008.scaffold00029 1212061 1 G A scaffold5748 Both SNP 0008.scaffold00029 1212109 1 A C scaffold5748 Both SNP 0008.scaffold00029 1212221 1 A G scaffold5748 Both SNP 0008.scaffold00029 1212239 1 G A scaffold5748 Both SNP 0008.scaffold00029 1212306 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1212325 5 TCTGA ..... scaffold5748 Both INDEL 0008.scaffold00029 1212431 2 TA .. scaffold5748 Both SNP 0008.scaffold00029 1212447 1 T C scaffold5748 Both SNP 0008.scaffold00029 1212551 1 C T scaffold5748 Both SNP 0008.scaffold00029 1212583 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1212707 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1212726 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1212733 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1212751 1 G A scaffold5748 Both SNP 0008.scaffold00029 1212800 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1212881 3 ... AAA scaffold5748 Both SNP 0008.scaffold00029 1212914 1 T A scaffold5748 Both SNP 0008.scaffold00029 1212944 1 G A scaffold5748 Both SNP 0008.scaffold00029 1212990 1 T C scaffold5748 Both SNP 0008.scaffold00029 1213027 1 T C scaffold5748 ReadM SNP 0008.scaffold00029 1213287 1 T A - Both SNP 0008.scaffold00029 1213491 1 G A scaffold5748 Both SNP 0008.scaffold00029 1213556 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1213603 1 A T scaffold5748 ScafM INDEL 0008.scaffold00029 1213668 24 ........................ GATAAAGTTTTACCCCCTGACTTG scaffold5748 ScafM INDEL 0008.scaffold00029 1213669 3 ... GTG scaffold5748 ScafM SNP 0008.scaffold00029 1213677 1 A G scaffold5748 Both SNP 0008.scaffold00029 1213698 1 G A scaffold5748 Both SNP 0008.scaffold00029 1213788 1 G A scaffold5748 Both SNP 0008.scaffold00029 1213793 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1213808 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1213839 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1213854 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1213893 1 C G scaffold5748 ScafM SNP 0008.scaffold00029 1213911 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1213928 1 G A scaffold5748 Both SNP 0008.scaffold00029 1213980 1 A G scaffold5748 ReadM INDEL 0008.scaffold00029 1214048 1 . C - ReadM SNP 0008.scaffold00029 1214060 1 T C - ReadM SNP 0008.scaffold00029 1214075 1 G A - ScafM SNP 0008.scaffold00029 1214536 1 T A scaffold5748 ScafM INDEL 0008.scaffold00029 1214590 1 . A scaffold5748 ScafM SNP 0008.scaffold00029 1214651 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1214669 1 T C scaffold5748 Both SNP 0008.scaffold00029 1214732 1 G A scaffold5748 ReadM SNP 0008.scaffold00029 1214757 1 G A - ScafM SNP 0008.scaffold00029 1214862 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1214905 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1214913 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1214920 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1214933 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1214962 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1214989 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1214996 1 A G scaffold5748 Both INDEL 0008.scaffold00029 1215034 3 ATC ... scaffold5748 Both SNP 0008.scaffold00029 1215223 1 A G scaffold5748 Both SNP 0008.scaffold00029 1215293 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1215393 1 G C scaffold5748 Both SNP 0008.scaffold00029 1215481 1 C T scaffold5748 Both SNP 0008.scaffold00029 1215507 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1215528 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1215681 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1215831 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1215834 2 AG GA scaffold5748 ScafM SNP 0008.scaffold00029 1215844 1 C T scaffold5748 ReadM SNP 0008.scaffold00029 1215932 1 C T - Both SNP 0008.scaffold00029 1216065 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1216302 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1216354 40 ........................................ GGTTTTTTAGGGGGAGGGGTAAAGCTGGCGGGGGCCCCAT scaffold5748 ReadM SNP 0008.scaffold00029 1216392 1 T C - ReadM SNP 0008.scaffold00029 1216528 1 C T - ReadM SNP 0008.scaffold00029 1216699 1 G C - Both SNP 0008.scaffold00029 1216774 1 C T scaffold5748 ReadM SNP 0008.scaffold00029 1216988 1 T A - ReadM SNP 0008.scaffold00029 1216990 1 T A - ReadM SNP 0008.scaffold00029 1217126 1 A G - ReadM SNP 0008.scaffold00029 1217279 1 G C - ReadM SNP 0008.scaffold00029 1217294 1 G A - Both SNP 0008.scaffold00029 1217409 1 C T scaffold5748 Both SNP 0008.scaffold00029 1217490 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1217509 1 C A scaffold5748 ScafM INDEL 0008.scaffold00029 1217517 1 G . scaffold5748 ScafM SNP 0008.scaffold00029 1217550 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1217552 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1217582 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1217598 1 G T scaffold5748 Both INDEL 0008.scaffold00029 1217638 1 . A scaffold5748 Both SNP 0008.scaffold00029 1217803 1 A G scaffold5748 Both SNP 0008.scaffold00029 1217850 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1217941 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1217982 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1218077 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1218112 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1218149 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1218220 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1218231 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1218235 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1218321 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1218357 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1218365 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1218868 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1218903 1 . T scaffold5748 ScafM SNP 0008.scaffold00029 1218919 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1218921 1 C G scaffold5748 ScafM SNP 0008.scaffold00029 1218923 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1218931 1 T C scaffold5748 Both SNP 0008.scaffold00029 1219000 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1219235 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1219260 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1219297 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1219320 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1219327 1 . T scaffold5748 ScafM SNP 0008.scaffold00029 1219344 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1219386 1 A T scaffold5748 ScafM INDEL 0008.scaffold00029 1219612 1 . C scaffold5748 ScafM SNP 0008.scaffold00029 1219631 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1219657 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1219659 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1219663 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1219749 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1219883 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1219903 2 TT AC scaffold5748 ScafM SNP 0008.scaffold00029 1219977 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1220048 8 ........ ACTTGATA scaffold5748 ScafM SNP 0008.scaffold00029 1220125 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1220128 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1220141 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1225264 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1225292 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1225299 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1225328 2 GT AC scaffold5748 ScafM SNP 0008.scaffold00029 1225337 1 T G scaffold5748 ScafM INDEL 0008.scaffold00029 1225438 1 G . scaffold5748 Both SNP 0008.scaffold00029 1225553 1 C T scaffold5748 Both SNP 0008.scaffold00029 1225595 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1225608 1 G T scaffold5748 ScafM INDEL 0008.scaffold00029 1225649 3 TAC ... scaffold5748 ScafM SNP 0008.scaffold00029 1225654 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1225676 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1225701 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1225713 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1225736 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1225760 1 C G scaffold5748 ScafM SNP 0008.scaffold00029 1225783 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1225789 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1225794 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1225869 1 . G scaffold5748 ScafM SNP 0008.scaffold00029 1225872 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1225887 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1225899 1 . G scaffold5748 ScafM SNP 0008.scaffold00029 1225904 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1225921 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1225947 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1225980 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1225991 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1226005 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1226017 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1226160 1 T . scaffold5748 ScafM SNP 0008.scaffold00029 1226183 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1226208 6 ACATAT ...... scaffold5748 Both SNP 0008.scaffold00029 1226255 1 A T scaffold5748 ScafM INDEL 0008.scaffold00029 1226367 1 . G scaffold5748 ScafM SNP 0008.scaffold00029 1226371 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1226402 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1226671 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1226689 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1226714 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1226763 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1226781 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1226813 1 G T scaffold5748 ScafM SNP 0008.scaffold00029 1227095 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1227127 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1227135 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1227177 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1227203 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1227226 2 TC CT scaffold5748 ScafM SNP 0008.scaffold00029 1227837 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1227862 2 CC .T scaffold5748 ScafM SNP 0008.scaffold00029 1227871 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1227938 1 T C scaffold5748 ScafM INDEL 0008.scaffold00029 1227959 1 . A scaffold5748 ScafM SNP 0008.scaffold00029 1227961 1 T A scaffold5748 ScafM INDEL 0008.scaffold00029 1228002 2 CG .. scaffold5748 ScafM SNP 0008.scaffold00029 1228017 1 C G scaffold5748 Both SNP 0008.scaffold00029 1228224 1 G T scaffold5748 Both SNP 0008.scaffold00029 1228234 1 C T scaffold5748 Both SNP 0008.scaffold00029 1228389 1 G A scaffold5748 Both SNP 0008.scaffold00029 1228437 1 A G scaffold5748 Both SNP 0008.scaffold00029 1228644 1 C G scaffold5748 Both SNP 0008.scaffold00029 1228674 1 T C scaffold5748 Both SNP 0008.scaffold00029 1228716 1 T A scaffold5748 Both SNP 0008.scaffold00029 1228736 1 A G scaffold5748 Both SNP 0008.scaffold00029 1228888 1 T C scaffold5748 Both SNP 0008.scaffold00029 1228892 1 G A scaffold5748 Both SNP 0008.scaffold00029 1228954 1 C T scaffold5748 Both SNP 0008.scaffold00029 1228967 1 C T scaffold5748 Both SNP 0008.scaffold00029 1228977 1 G A scaffold5748 Both INDEL 0008.scaffold00029 1229063 1 A . scaffold5748 Both SNP 0008.scaffold00029 1229139 1 G T scaffold5748 ScafM INDEL 0008.scaffold00029 1229342 7 ACTCACA ....... scaffold5748 ReadM SNP 0008.scaffold00029 1229483 1 T C - Both SNP 0008.scaffold00029 1229615 1 A G scaffold5748 Both SNP 0008.scaffold00029 1229711 1 G A scaffold5748 Both SNP 0008.scaffold00029 1229921 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1230041 1 T A scaffold5748 Both SNP 0008.scaffold00029 1230104 1 T C scaffold5748 Both SNP 0008.scaffold00029 1230215 1 T G scaffold5748 ScafM INDEL 0008.scaffold00029 1230636 3 TTT ... scaffold5748 Both SNP 0008.scaffold00029 1230865 1 C A scaffold5748 Both SNP 0008.scaffold00029 1232632 1 C A scaffold5748 ReadM SNP 0008.scaffold00029 1232722 1 G T - Both SNP 0008.scaffold00029 1233430 1 T C scaffold5748 Both SNP 0008.scaffold00029 1233676 1 A G scaffold5748 Both SNP 0008.scaffold00029 1233786 1 T A scaffold5748 Both SNP 0008.scaffold00029 1233893 1 A T scaffold5748 Both SNP 0008.scaffold00029 1233940 1 T C scaffold5748 Both SNP 0008.scaffold00029 1233947 1 C G scaffold5748 Both SNP 0008.scaffold00029 1233951 1 G A scaffold5748 Both SNP 0008.scaffold00029 1234069 1 T C scaffold5748 Both SNP 0008.scaffold00029 1234159 1 A C scaffold5748 Both SNP 0008.scaffold00029 1234161 1 T C scaffold5748 ScafM INDEL 0008.scaffold00029 1234208 4 GCGT .... scaffold5748 Both SNP 0008.scaffold00029 1234217 1 C G scaffold5748 Both SNP 0008.scaffold00029 1234519 1 C A scaffold5748 Both SNP 0008.scaffold00029 1234611 1 A C scaffold5748 ReadM SNP 0008.scaffold00029 1235074 1 A G - ReadM SNP 0008.scaffold00029 1235097 1 C G - ReadM INDEL 0008.scaffold00029 1235170 3 ... CGG - ReadM SNP 0008.scaffold00029 1235267 1 G A - ReadM SNP 0008.scaffold00029 1235380 1 T A - ReadM SNP 0008.scaffold00029 1235828 1 T G - ReadM SNP 0008.scaffold00029 1236359 1 A G - ReadM SNP 0008.scaffold00029 1236387 1 C G - ReadM SNP 0008.scaffold00029 1236633 1 C G - ReadM SNP 0008.scaffold00029 1238292 1 C G - ReadM INDEL 0008.scaffold00029 1238489 2 .. AA - ReadM SNP 0008.scaffold00029 1238748 1 C T - ReadM SNP 0008.scaffold00029 1238754 1 G T - ReadM INDEL 0008.scaffold00029 1238764 1 G . - ReadM SNP 0008.scaffold00029 1239196 1 T A - Both SNP 0008.scaffold00029 1239459 1 A C scaffold5748 Both SNP 0008.scaffold00029 1239591 1 A G scaffold5748 Both SNP 0008.scaffold00029 1239730 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1239841 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1240122 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1240164 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1240197 2 CA TT scaffold5748 ScafM SNP 0008.scaffold00029 1240200 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1240204 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1240231 1 . C scaffold5748 ScafM SNP 0008.scaffold00029 1240235 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1240265 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1240300 2 TG CA scaffold5748 ScafM SNP 0008.scaffold00029 1240562 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1240575 9 CTACAAAGT ......... scaffold5748 Both SNP 0008.scaffold00029 1240627 1 C A scaffold5748 Both SNP 0008.scaffold00029 1240954 1 A G scaffold5748 Both SNP 0008.scaffold00029 1241087 1 T C scaffold5748 Both SNP 0008.scaffold00029 1241112 1 G A scaffold5748 Both SNP 0008.scaffold00029 1241142 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1241333 9 ......... TGTTACCTA scaffold5748 Both SNP 0008.scaffold00029 1241365 1 C G scaffold5748 Both SNP 0008.scaffold00029 1241428 1 T G scaffold5748 Both SNP 0008.scaffold00029 1241508 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1241561 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1241584 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1241600 1 T A scaffold5748 Both SNP 0008.scaffold00029 1241619 1 A C scaffold5748 ReadM SNP 0008.scaffold00029 1241810 1 G A - ReadM SNP 0008.scaffold00029 1241823 1 T A - ReadM SNP 0008.scaffold00029 1242006 1 T C - ReadM SNP 0008.scaffold00029 1242025 1 A G - ReadM SNP 0008.scaffold00029 1242097 1 C T - ReadM SNP 0008.scaffold00029 1242143 1 A G - ReadM SNP 0008.scaffold00029 1242172 1 C T - ReadM SNP 0008.scaffold00029 1242296 1 A C - ReadM SNP 0008.scaffold00029 1242611 1 G C - ReadM SNP 0008.scaffold00029 1242724 1 G A - Both SNP 0008.scaffold00029 1242857 1 C A scaffold5748 Both SNP 0008.scaffold00029 1242877 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1242927 1 G A scaffold5748 ReadM SNP 0008.scaffold00029 1247271 1 T C - ReadM SNP 0008.scaffold00029 1247335 1 C G - ReadM SNP 0008.scaffold00029 1247346 1 C A - ReadM SNP 0008.scaffold00029 1247372 1 C T - Both SNP 0008.scaffold00029 1247482 1 G A scaffold5748 Both SNP 0008.scaffold00029 1247491 1 C T scaffold5748 Both SNP 0008.scaffold00029 1247522 1 C A scaffold5748 Both SNP 0008.scaffold00029 1247602 1 G A scaffold5748 Both SNP 0008.scaffold00029 1247634 1 A C scaffold5748 Both SNP 0008.scaffold00029 1247728 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1247845 1 G A scaffold5748 Both SNP 0008.scaffold00029 1247907 1 G T scaffold5748 Both SNP 0008.scaffold00029 1247946 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1247987 1 G T scaffold5748 ScafM INDEL 0008.scaffold00029 1247991 14 .............T AAAAAAAAAAAAAA scaffold5748 ScafM INDEL 0008.scaffold00029 1248214 2 .. TC scaffold5748 ScafM SNP 0008.scaffold00029 1248216 1 A T scaffold5748 Both SNP 0008.scaffold00029 1248298 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1248428 1 T G scaffold5748 Both SNP 0008.scaffold00029 1248523 1 C T scaffold5748 Both SNP 0008.scaffold00029 1248544 1 T C scaffold5748 Both SNP 0008.scaffold00029 1248648 1 A C scaffold5748 Both SNP 0008.scaffold00029 1248699 1 C T scaffold5748 Both SNP 0008.scaffold00029 1248769 1 T C scaffold5748 Both SNP 0008.scaffold00029 1248774 1 T G scaffold5748 Both SNP 0008.scaffold00029 1248935 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1248973 2 CC TA scaffold5748 ReadM SNP 0008.scaffold00029 1249214 1 C A - ReadM SNP 0008.scaffold00029 1249231 1 C A - ReadM SNP 0008.scaffold00029 1249270 1 C T - ReadM SNP 0008.scaffold00029 1249439 1 C T - Both SNP 0008.scaffold00029 1249663 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1249701 1 A T scaffold5748 ReadM SNP 0008.scaffold00029 1249850 1 C G - ReadM SNP 0008.scaffold00029 1249896 1 T C - ReadM SNP 0008.scaffold00029 1249962 1 G A - ReadM SNP 0008.scaffold00029 1250022 1 C T - ReadM SNP 0008.scaffold00029 1250128 1 A G - ReadM SNP 0008.scaffold00029 1250366 1 G T - ReadM SNP 0008.scaffold00029 1250852 1 T G - ReadM INDEL 0008.scaffold00029 1250855 1 . A - ScafM SNP 0008.scaffold00029 1251485 1 A G scaffold2414 ScafM SNP 0008.scaffold00029 1251504 1 T G scaffold2414 ScafM SNP 0008.scaffold00029 1251506 1 T A scaffold2414 ScafM SNP 0008.scaffold00029 1251522 1 C T scaffold2414 ScafM SNP 0008.scaffold00029 1251542 1 T G scaffold2414 ScafM SNP 0008.scaffold00029 1251545 1 C T scaffold2414 ScafM SNP 0008.scaffold00029 1251581 1 C A scaffold2414 ScafM SNP 0008.scaffold00029 1251583 1 G A scaffold2414 ScafM SNP 0008.scaffold00029 1251651 1 G A scaffold2414 ScafM SNP 0008.scaffold00029 1251655 1 T C scaffold2414 ScafM SNP 0008.scaffold00029 1251671 1 C T scaffold2414 ScafM INDEL 0008.scaffold00029 1251675 1 G . scaffold2414 ScafM INDEL 0008.scaffold00029 1251799 1 A . scaffold5748 ReadM SNP 0008.scaffold00029 1251880 1 C T - ReadM SNP 0008.scaffold00029 1251933 1 G A - ReadM SNP 0008.scaffold00029 1252060 1 A G - ReadM SNP 0008.scaffold00029 1252277 1 G C - ReadM INDEL 0008.scaffold00029 1252314 1 . T - ReadM SNP 0008.scaffold00029 1252332 1 T C - ReadM INDEL 0008.scaffold00029 1252529 2 .. TA - ReadM SNP 0008.scaffold00029 1252545 1 C T - ReadM SNP 0008.scaffold00029 1252614 1 T A - ReadM SNP 0008.scaffold00029 1252979 1 C T - ReadM SNP 0008.scaffold00029 1253083 1 C T - ReadM SNP 0008.scaffold00029 1253200 1 G C - ReadM SNP 0008.scaffold00029 1253236 1 T C - ReadM SNP 0008.scaffold00029 1253386 1 C T - ReadM SNP 0008.scaffold00029 1253446 1 C T - ReadM SNP 0008.scaffold00029 1253473 1 T G - ReadM SNP 0008.scaffold00029 1254308 1 A G - ReadM SNP 0008.scaffold00029 1254339 1 G A - ReadM SNP 0008.scaffold00029 1254652 1 T C - ReadM SNP 0008.scaffold00029 1254675 1 A G - ReadM SNP 0008.scaffold00029 1254684 1 T C - ReadM SNP 0008.scaffold00029 1254794 1 G A - ReadM SNP 0008.scaffold00029 1254852 1 T G - ReadM SNP 0008.scaffold00029 1254946 1 G A - ReadM SNP 0008.scaffold00029 1254978 1 T C - ReadM SNP 0008.scaffold00029 1255159 1 A G - ReadM SNP 0008.scaffold00029 1255386 1 T C - ReadM SNP 0008.scaffold00029 1255393 1 C T - ReadM SNP 0008.scaffold00029 1255476 1 A G - ReadM SNP 0008.scaffold00029 1255532 1 T C - ReadM SNP 0008.scaffold00029 1255578 1 G T - ReadM SNP 0008.scaffold00029 1255677 1 C T - ReadM SNP 0008.scaffold00029 1255727 1 T G - ReadM SNP 0008.scaffold00029 1255736 1 A T - ReadM SNP 0008.scaffold00029 1255757 1 G A - ReadM SNP 0008.scaffold00029 1255869 1 C A - ReadM SNP 0008.scaffold00029 1255938 1 T G - ReadM SNP 0008.scaffold00029 1255967 2 TT CC - ReadM SNP 0008.scaffold00029 1256006 1 G A - ReadM SNP 0008.scaffold00029 1256061 1 T A - ReadM SNP 0008.scaffold00029 1256138 1 A C - ReadM SNP 0008.scaffold00029 1256195 1 T C - ReadM SNP 0008.scaffold00029 1256274 1 T C - ReadM SNP 0008.scaffold00029 1256290 1 A G - ReadM SNP 0008.scaffold00029 1256422 1 T G - ReadM SNP 0008.scaffold00029 1256527 1 C T - ReadM SNP 0008.scaffold00029 1256557 1 T C - ReadM SNP 0008.scaffold00029 1256828 1 T C - ReadM SNP 0008.scaffold00029 1256845 1 T C - ReadM SNP 0008.scaffold00029 1256886 1 G A - ReadM SNP 0008.scaffold00029 1257200 1 C T - ReadM SNP 0008.scaffold00029 1257218 1 T C - ReadM INDEL 0008.scaffold00029 1257267 1 . T - ReadM SNP 0008.scaffold00029 1257317 1 A T - ReadM SNP 0008.scaffold00029 1257321 1 A G - ReadM SNP 0008.scaffold00029 1257369 1 C T - ReadM SNP 0008.scaffold00029 1257425 1 A G - ReadM SNP 0008.scaffold00029 1257489 1 T C - ReadM SNP 0008.scaffold00029 1257663 1 T C - ReadM SNP 0008.scaffold00029 1257781 1 T G - ReadM SNP 0008.scaffold00029 1257941 1 C T - ScafM SNP 0008.scaffold00029 1258505 1 T G scaffold5748 Both SNP 0008.scaffold00029 1258567 1 G C scaffold5748 ScafM SNP 0008.scaffold00029 1258688 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1258696 1 G A scaffold5748 ScafM INDEL 0008.scaffold00029 1258725 3 TCG ... scaffold5748 ScafM INDEL 0008.scaffold00029 1258771 1 . A scaffold5748 ScafM SNP 0008.scaffold00029 1258921 1 C T scaffold5748 ReadM SNP 0008.scaffold00029 1261082 1 C A - ReadM SNP 0008.scaffold00029 1261285 1 C T - ReadM SNP 0008.scaffold00029 1261589 1 C T - ReadM SNP 0008.scaffold00029 1261664 1 T C - ReadM SNP 0008.scaffold00029 1261791 1 C T - ReadM SNP 0008.scaffold00029 1261909 1 A G - ReadM SNP 0008.scaffold00029 1261987 1 T C - ReadM SNP 0008.scaffold00029 1262076 1 G A - ReadM SNP 0008.scaffold00029 1262165 1 T C - ReadM SNP 0008.scaffold00029 1262316 1 T G - ReadM SNP 0008.scaffold00029 1262499 1 T A - ReadM SNP 0008.scaffold00029 1262721 1 T C - ReadM SNP 0008.scaffold00029 1262863 1 C T - ReadM SNP 0008.scaffold00029 1262951 1 A C - ReadM SNP 0008.scaffold00029 1262978 1 G A - ReadM SNP 0008.scaffold00029 1263175 1 G A - ReadM SNP 0008.scaffold00029 1263190 1 G T - ReadM SNP 0008.scaffold00029 1263196 1 G T - ReadM SNP 0008.scaffold00029 1263218 1 A G - ReadM SNP 0008.scaffold00029 1263280 1 C A - ReadM INDEL 0008.scaffold00029 1263369 3 CAG ... - ReadM SNP 0008.scaffold00029 1263477 1 A G - ReadM SNP 0008.scaffold00029 1263526 1 T C - ReadM SNP 0008.scaffold00029 1263551 1 G A - ReadM SNP 0008.scaffold00029 1263584 1 C T - ReadM SNP 0008.scaffold00029 1263614 1 T C - ReadM SNP 0008.scaffold00029 1263689 1 A G - ReadM SNP 0008.scaffold00029 1263737 1 A G - ReadM SNP 0008.scaffold00029 1263797 1 G A - ReadM SNP 0008.scaffold00029 1263871 1 A G - ReadM SNP 0008.scaffold00029 1264159 1 T C - ReadM SNP 0008.scaffold00029 1264162 1 A G - ReadM SNP 0008.scaffold00029 1264283 1 C G - ReadM SNP 0008.scaffold00029 1264290 1 G A - ReadM SNP 0008.scaffold00029 1264369 1 T G - ReadM SNP 0008.scaffold00029 1264416 1 T G - ReadM SNP 0008.scaffold00029 1264443 1 A G - ReadM SNP 0008.scaffold00029 1264449 1 A G - ReadM SNP 0008.scaffold00029 1264509 1 T A - ReadM INDEL 0008.scaffold00029 1264517 1 . A - ReadM SNP 0008.scaffold00029 1264693 1 T C - ScafM SNP 0008.scaffold00029 1265153 2 AA TG scaffold5748 Both SNP 0008.scaffold00029 1265225 1 T C scaffold5748 Both SNP 0008.scaffold00029 1265227 1 A G scaffold5748 Both INDEL 0008.scaffold00029 1265305 2 .. AT scaffold5748 ReadM INDEL 0008.scaffold00029 1265306 2 .. TG - Both SNP 0008.scaffold00029 1265311 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1265400 6 CCATAG ...... scaffold5748 ScafM SNP 0008.scaffold00029 1265426 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1265461 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1265486 1 A T scaffold5748 ScafM SNP 0008.scaffold00029 1265513 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1265520 1 C G scaffold5748 ScafM SNP 0008.scaffold00029 1265532 1 G C scaffold5748 ScafM INDEL 0008.scaffold00029 1265550 26 .......................... ATAACATCAAATTACACGAGTATGCA scaffold5748 ScafM SNP 0008.scaffold00029 1265597 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1265611 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1265684 1 C T scaffold5748 ScafM INDEL 0008.scaffold00029 1265727 24 GCCCTCAAATCAAGCAACACTCAC ........................ scaffold5748 ScafM SNP 0008.scaffold00029 1265761 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1265787 1 T G scaffold5748 ScafM SNP 0008.scaffold00029 1265817 1 T A scaffold5748 ScafM SNP 0008.scaffold00029 1265825 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1265839 2 GC AA scaffold5748 ScafM SNP 0008.scaffold00029 1265856 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1265858 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1265875 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1265878 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1265883 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1266197 1 T C scaffold5748 ScafM SNP 0008.scaffold00029 1266206 1 C A scaffold5748 ScafM SNP 0008.scaffold00029 1266208 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1266211 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1266241 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1266243 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1266246 1 A G scaffold5748 ScafM SNP 0008.scaffold00029 1266258 1 G A scaffold5748 ScafM SNP 0008.scaffold00029 1266267 1 G C scaffold5748 ScafM INDEL 0008.scaffold00029 1266279 1 . A scaffold5748 ScafM SNP 0008.scaffold00029 1266330 1 A G scaffold5748 ScafM INDEL 0008.scaffold00029 1266384 3 TAA ... scaffold5748 ScafM SNP 0008.scaffold00029 1266452 1 C T scaffold5748 ScafM SNP 0008.scaffold00029 1266459 1 A G scaffold5748 Both SNP 0008.scaffold00029 1266525 1 A G scaffold5748 Both SNP 0008.scaffold00029 1266537 1 T A scaffold5748 Both SNP 0008.scaffold00029 1266606 1 A C scaffold5748 Both SNP 0008.scaffold00029 1266762 1 G A scaffold5748 Both SNP 0008.scaffold00029 1266789 1 G A scaffold5748 Both SNP 0008.scaffold00029 1266906 1 C T scaffold5748 Both SNP 0008.scaffold00029 1267062 1 A G scaffold5748 Both SNP 0008.scaffold00029 1267116 1 T G scaffold5748 ScafM INDEL 0008.scaffold00029 1267235 2 .. TG scaffold5748 ScafM INDEL 0008.scaffold00029 1267245 7 TCACAAC ....... scaffold5748 ScafM SNP 0008.scaffold00029 1267282 1 A C scaffold5748 ScafM SNP 0008.scaffold00029 1267310 1 T A scaffold5748 ScafM INDEL 0008.scaffold00029 1281035 2 .. CC scaffold10972 ScafM SNP 0008.scaffold00029 1281086 1 C T scaffold10972 ScafM INDEL 0008.scaffold00029 1281090 4 GCCC .... scaffold10972 ScafM INDEL 0008.scaffold00029 1281104 1 . T scaffold10972 ScafM SNP 0008.scaffold00029 1281136 1 C T scaffold10972 ReadM SNP 0008.scaffold00029 1281251 1 G A - ReadM SNP 0008.scaffold00029 1281370 1 A G - ReadM SNP 0008.scaffold00029 1281391 1 G A - Both SNP 0008.scaffold00029 1281444 1 G A scaffold10972 Both SNP 0008.scaffold00029 1281507 1 T A scaffold10972 Both SNP 0008.scaffold00029 1281590 1 T C scaffold10972 Both SNP 0008.scaffold00029 1281615 1 A T scaffold10972 ReadM SNP 0008.scaffold00029 1281667 1 T C - ReadM SNP 0008.scaffold00029 1281717 1 T C - ReadM INDEL 0008.scaffold00029 1282075 1 G . - Both SNP 0008.scaffold00029 1282296 1 G A scaffold10972 Both SNP 0008.scaffold00029 1282320 1 T G scaffold10972 Both SNP 0008.scaffold00029 1282400 1 A C scaffold10972 Both SNP 0008.scaffold00029 1282437 1 G A scaffold10972 Both SNP 0008.scaffold00029 1282502 1 G C scaffold10972 ReadM SNP 0008.scaffold00029 1283078 1 A C - ReadM SNP 0008.scaffold00029 1283114 1 G A - ReadM SNP 0008.scaffold00029 1283227 1 C T - ReadM SNP 0008.scaffold00029 1283466 1 T A - ReadM SNP 0008.scaffold00029 1283508 1 A G - ReadM SNP 0008.scaffold00029 1283526 1 G A - Both SNP 0008.scaffold00029 1283604 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1283618 1 A G scaffold10972 ReadM SNP 0008.scaffold00029 1283762 1 C T - ReadM SNP 0008.scaffold00029 1283776 1 G C - ScafM SNP 0008.scaffold00029 1284285 1 G A scaffold10972 ReadM SNP 0008.scaffold00029 1284418 1 C T - ScafM SNP 0008.scaffold00029 1284970 1 A T scaffold10972 Both SNP 0008.scaffold00029 1285223 1 G A scaffold10972 Both SNP 0008.scaffold00029 1285253 1 T A scaffold10972 Both SNP 0008.scaffold00029 1285285 1 A T scaffold10972 Both SNP 0008.scaffold00029 1285416 1 C T scaffold10972 ReadM SNP 0008.scaffold00029 1285660 1 G A - ReadM SNP 0008.scaffold00029 1285702 1 T G - ReadM SNP 0008.scaffold00029 1285988 1 T C - ReadM SNP 0008.scaffold00029 1286061 1 T C - ScafM INDEL 0008.scaffold00029 1286795 14 ATATATGATATATG .............. scaffold10972 Both SNP 0008.scaffold00029 1286944 1 T G scaffold10972 Both INDEL 0008.scaffold00029 1286985 1 A . scaffold10972 Both SNP 0008.scaffold00029 1287151 1 G A scaffold10972 Both INDEL 0008.scaffold00029 1287153 1 A . scaffold10972 ReadM SNP 0008.scaffold00029 1287374 1 G T - ReadM INDEL 0008.scaffold00029 1287423 1 . T - ReadM SNP 0008.scaffold00029 1287457 1 G A - ReadM SNP 0008.scaffold00029 1287817 1 A C - ReadM SNP 0008.scaffold00029 1287882 1 C T - ReadM SNP 0008.scaffold00029 1287916 1 A G - Both SNP 0008.scaffold00029 1288297 1 G C scaffold10972 Both SNP 0008.scaffold00029 1288314 1 A G scaffold10972 Both INDEL 0008.scaffold00029 1288371 3 ... ACT scaffold10972 Both INDEL 0008.scaffold00029 1288524 1 . T scaffold10972 ScafM INDEL 0008.scaffold00029 1288560 2 AA .. scaffold10972 Both SNP 0008.scaffold00029 1288619 1 A G scaffold10972 Both SNP 0008.scaffold00029 1288650 1 T C scaffold10972 Both SNP 0008.scaffold00029 1288773 1 C T scaffold10972 Both SNP 0008.scaffold00029 1288775 1 A G scaffold10972 Both SNP 0008.scaffold00029 1288793 1 C T scaffold10972 Both SNP 0008.scaffold00029 1288815 1 C T scaffold10972 ReadM INDEL 0008.scaffold00029 1289011 2 AA .. - Both SNP 0008.scaffold00029 1289046 1 C T scaffold10972 Both SNP 0008.scaffold00029 1289077 1 C A scaffold10972 ReadM SNP 0008.scaffold00029 1289121 1 G A - Both SNP 0008.scaffold00029 1289231 1 T C scaffold10972 Both SNP 0008.scaffold00029 1289386 1 A G scaffold10972 ReadM SNP 0008.scaffold00029 1289440 1 C A - ReadM SNP 0008.scaffold00029 1289499 1 A T - ScafM SNP 0008.scaffold00029 1289598 1 T A scaffold10972 ScafM SNP 0008.scaffold00029 1289606 1 C T scaffold10972 ScafM INDEL 0008.scaffold00029 1289623 3 ... TAT scaffold10972 ScafM SNP 0008.scaffold00029 1289635 1 A T scaffold10972 ScafM SNP 0008.scaffold00029 1289641 1 T A scaffold10972 ScafM SNP 0008.scaffold00029 1289652 2 CC GA scaffold10972 ScafM INDEL 0008.scaffold00029 1289764 1 A . scaffold10972 ScafM SNP 0008.scaffold00029 1289767 1 T C scaffold10972 ScafM INDEL 0008.scaffold00029 1289769 2 TT .A scaffold10972 ScafM INDEL 0008.scaffold00029 1289776 2 CA .T scaffold10972 ScafM SNP 0008.scaffold00029 1289779 1 A T scaffold10972 ScafM SNP 0008.scaffold00029 1289800 2 AT CC scaffold10972 ScafM SNP 0008.scaffold00029 1289860 1 T C scaffold10972 ScafM INDEL 0008.scaffold00029 1289863 1 . T scaffold10972 ScafM SNP 0008.scaffold00029 1289868 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1289875 2 TC CT scaffold10972 Both SNP 0008.scaffold00029 1289994 1 T C scaffold10972 Both INDEL 0008.scaffold00029 1290084 1 . T scaffold10972 Both INDEL 0008.scaffold00029 1290125 1 T . scaffold10972 Both INDEL 0008.scaffold00029 1290227 1 A . scaffold10972 Both SNP 0008.scaffold00029 1290320 1 T C scaffold10972 Both SNP 0008.scaffold00029 1290352 1 A G scaffold10972 ScafM INDEL 0008.scaffold00029 1290604 1 . A scaffold10972 ReadM SNP 0008.scaffold00029 1291072 1 A T - Both SNP 0008.scaffold00029 1291114 1 T G scaffold10972 Both SNP 0008.scaffold00029 1291124 1 G T scaffold10972 Both SNP 0008.scaffold00029 1291188 1 T C scaffold10972 Both SNP 0008.scaffold00029 1291310 1 T G scaffold10972 Both SNP 0008.scaffold00029 1291352 1 T C scaffold10972 Both SNP 0008.scaffold00029 1291357 1 C T scaffold10972 Both SNP 0008.scaffold00029 1291427 1 T C scaffold10972 Both SNP 0008.scaffold00029 1291440 1 T C scaffold10972 Both SNP 0008.scaffold00029 1291452 1 G A scaffold10972 Both INDEL 0008.scaffold00029 1291539 1 T . scaffold10972 Both SNP 0008.scaffold00029 1291603 1 T A scaffold10972 Both SNP 0008.scaffold00029 1291605 1 G A scaffold10972 Both SNP 0008.scaffold00029 1291662 1 C G scaffold10972 Both SNP 0008.scaffold00029 1291693 1 C T scaffold10972 Both SNP 0008.scaffold00029 1291731 1 T A scaffold10972 Both SNP 0008.scaffold00029 1291762 1 G A scaffold10972 Both SNP 0008.scaffold00029 1291765 1 C T scaffold10972 Both SNP 0008.scaffold00029 1291891 1 C G scaffold10972 Both SNP 0008.scaffold00029 1292148 1 C T scaffold10972 Both SNP 0008.scaffold00029 1292193 1 A G scaffold10972 Both SNP 0008.scaffold00029 1292256 1 G C scaffold10972 Both SNP 0008.scaffold00029 1292315 1 C A scaffold10972 Both SNP 0008.scaffold00029 1292327 1 A G scaffold10972 Both SNP 0008.scaffold00029 1292335 1 C T scaffold10972 Both SNP 0008.scaffold00029 1292398 1 T C scaffold10972 Both SNP 0008.scaffold00029 1292494 1 T C scaffold10972 Both SNP 0008.scaffold00029 1292641 1 A G scaffold10972 Both SNP 0008.scaffold00029 1292743 1 C T scaffold10972 Both SNP 0008.scaffold00029 1292792 1 T A scaffold10972 Both INDEL 0008.scaffold00029 1292910 1 . A scaffold10972 Both SNP 0008.scaffold00029 1292959 1 G T scaffold10972 Both SNP 0008.scaffold00029 1293020 1 G A scaffold10972 Both SNP 0008.scaffold00029 1293025 1 A G scaffold10972 Both SNP 0008.scaffold00029 1293029 1 C T scaffold10972 Both INDEL 0008.scaffold00029 1293101 2 .. TC scaffold10972 ScafM INDEL 0008.scaffold00029 1293179 4 AAGT .... scaffold10972 Both SNP 0008.scaffold00029 1293225 1 A G scaffold10972 Both SNP 0008.scaffold00029 1293277 1 A T scaffold10972 Both SNP 0008.scaffold00029 1293291 1 C A scaffold10972 Both SNP 0008.scaffold00029 1293350 1 C A scaffold10972 Both SNP 0008.scaffold00029 1293385 1 A G scaffold10972 ScafM SNP 0008.scaffold00029 1293511 1 G A scaffold10972 Both SNP 0008.scaffold00029 1293530 1 A T scaffold10972 Both SNP 0008.scaffold00029 1293562 1 G A scaffold10972 Both SNP 0008.scaffold00029 1293570 1 T C scaffold10972 Both INDEL 0008.scaffold00029 1293648 2 .. TT scaffold10972 Both SNP 0008.scaffold00029 1293999 1 A G scaffold10972 Both SNP 0008.scaffold00029 1294054 1 C T scaffold10972 Both SNP 0008.scaffold00029 1294092 1 A G scaffold10972 ScafM SNP 0008.scaffold00029 1294107 1 G A scaffold10972 ScafM SNP 0008.scaffold00029 1294114 1 G T scaffold10972 ScafM INDEL 0008.scaffold00029 1294120 1 . A scaffold10972 ScafM SNP 0008.scaffold00029 1294133 1 T G scaffold10972 ScafM INDEL 0008.scaffold00029 1294161 10 .......... GTCTATGTTG scaffold10972 Both SNP 0008.scaffold00029 1294192 1 T C scaffold10972 Both SNP 0008.scaffold00029 1294580 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1294618 1 G C scaffold10972 ScafM SNP 0008.scaffold00029 1294638 1 A T scaffold10972 ScafM INDEL 0008.scaffold00029 1294644 1 G . scaffold10972 ScafM SNP 0008.scaffold00029 1294652 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1294655 1 G C scaffold10972 ScafM SNP 0008.scaffold00029 1294682 1 C T scaffold10972 ScafM SNP 0008.scaffold00029 1294707 1 T A scaffold10972 ScafM SNP 0008.scaffold00029 1294719 2 AG TA scaffold10972 Both SNP 0008.scaffold00029 1294845 1 T C scaffold10972 Both SNP 0008.scaffold00029 1294852 1 C T scaffold10972 Both INDEL 0008.scaffold00029 1295087 1 G . scaffold10972 Both SNP 0008.scaffold00029 1295107 1 C T scaffold10972 ScafM SNP 0008.scaffold00029 1295121 1 T C scaffold10972 Both SNP 0008.scaffold00029 1295168 1 A G scaffold10972 Both SNP 0008.scaffold00029 1295192 1 G A scaffold10972 ScafM SNP 0008.scaffold00029 1295219 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1295229 1 C G scaffold10972 ScafM SNP 0008.scaffold00029 1295232 1 T A scaffold10972 Both SNP 0008.scaffold00029 1295269 1 C T scaffold10972 Both SNP 0008.scaffold00029 1295309 1 A G scaffold10972 Both SNP 0008.scaffold00029 1295337 1 A G scaffold10972 ScafM SNP 0008.scaffold00029 1295377 1 G A scaffold10972 Both SNP 0008.scaffold00029 1295403 1 T G scaffold10972 Both SNP 0008.scaffold00029 1295472 1 G A scaffold10972 ScafM SNP 0008.scaffold00029 1295492 1 G T scaffold10972 ScafM SNP 0008.scaffold00029 1295555 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1295815 1 T A scaffold10972 ScafM SNP 0008.scaffold00029 1295817 1 A C scaffold10972 ScafM INDEL 0008.scaffold00029 1295897 15 GTATTGTATTAGCGA ............... scaffold10972 ScafM SNP 0008.scaffold00029 1295921 1 C T scaffold10972 ScafM SNP 0008.scaffold00029 1295928 1 A G scaffold10972 ScafM SNP 0008.scaffold00029 1295933 1 T C scaffold10972 ScafM INDEL 0008.scaffold00029 1296273 7 GGCTGTA ....... scaffold10972 Both SNP 0008.scaffold00029 1296327 1 A T scaffold10972 Both SNP 0008.scaffold00029 1296375 1 G A scaffold10972 Both SNP 0008.scaffold00029 1296449 1 A G scaffold10972 Both SNP 0008.scaffold00029 1296453 1 C T scaffold10972 Both SNP 0008.scaffold00029 1296455 1 G A scaffold10972 Both SNP 0008.scaffold00029 1296597 1 T C scaffold10972 Both SNP 0008.scaffold00029 1296619 1 G A scaffold10972 Both SNP 0008.scaffold00029 1296680 1 A G scaffold10972 Both SNP 0008.scaffold00029 1296740 1 C G scaffold10972 Both SNP 0008.scaffold00029 1296752 1 A G scaffold10972 Both INDEL 0008.scaffold00029 1296812 2 AC .. scaffold10972 Both SNP 0008.scaffold00029 1297116 1 C A scaffold10972 Both SNP 0008.scaffold00029 1297138 1 A G scaffold10972 Both SNP 0008.scaffold00029 1297239 1 C G scaffold10972 Both SNP 0008.scaffold00029 1297334 1 G A scaffold10972 Both SNP 0008.scaffold00029 1297458 1 A G scaffold10972 Both SNP 0008.scaffold00029 1297509 1 C T scaffold10972 Both SNP 0008.scaffold00029 1297529 1 T C scaffold10972 ScafM SNP 0008.scaffold00029 1297564 1 C T scaffold10972 ScafM SNP 0008.scaffold00029 1297575 1 T A scaffold10972 ScafM INDEL 0008.scaffold00029 1297595 1 . C scaffold10972 ScafM INDEL 0008.scaffold00029 1297596 9 ......... GGCTTTGCC scaffold10972 ScafM INDEL 0008.scaffold00029 1297600 14 .............. TTTTGAGACATGTT scaffold10972 ScafM INDEL 0008.scaffold00029 1297601 7 ....... ATCTTCT scaffold10972 ScafM INDEL 0008.scaffold00029 1297602 2 .. AA scaffold10972 ScafM INDEL 0008.scaffold00029 1297605 1 . A scaffold10972 ScafM INDEL 0008.scaffold00029 1297608 9 ......... AGGAGAGTG scaffold10972 Both SNP 0008.scaffold00029 1297626 1 T C scaffold10972 Both INDEL 0008.scaffold00029 1297742 1 T . scaffold10972 Both SNP 0008.scaffold00029 1297798 1 G C scaffold10972 Both SNP 0008.scaffold00029 1297887 1 G A scaffold10972 Both SNP 0008.scaffold00029 1298051 1 A T scaffold10972 Both SNP 0008.scaffold00029 1298286 1 G A scaffold10972 Both SNP 0008.scaffold00029 1298298 1 T C scaffold10972 Both SNP 0008.scaffold00029 1298331 1 G A scaffold10972 ScafM SNP 0008.scaffold00029 1298367 1 T C scaffold10972 ScafM INDEL 0008.scaffold00029 1298375 6 ...... TGGAGT scaffold10972 Both SNP 0008.scaffold00029 1298424 1 C T scaffold10972 Both SNP 0008.scaffold00029 1298426 1 A T scaffold10972 Both SNP 0008.scaffold00029 1298582 1 T C scaffold10972 Both SNP 0008.scaffold00029 1298619 1 A G scaffold10972 Both SNP 0008.scaffold00029 1298692 1 G A scaffold10972 Both SNP 0008.scaffold00029 1298738 1 C T scaffold10972 Both SNP 0008.scaffold00029 1298985 1 T C scaffold10972 Both SNP 0008.scaffold00029 1298998 1 T C scaffold10972 Both SNP 0008.scaffold00029 1299213 1 C T scaffold10972 Both SNP 0008.scaffold00029 1299266 1 G C scaffold10972 Both SNP 0008.scaffold00029 1299327 1 T C scaffold10972 Both SNP 0008.scaffold00029 1299494 1 T C scaffold10972 Both SNP 0008.scaffold00029 1299636 1 C T scaffold10972 Both SNP 0008.scaffold00029 1299680 1 G T scaffold10972 Both SNP 0008.scaffold00029 1299804 1 T A scaffold10972 ScafM INDEL 0008.scaffold00029 1299927 12 TCAAGTACAGCA ............ scaffold10972 ScafM SNP 0008.scaffold00029 1300019 2 CA TG scaffold10972 Both SNP 0008.scaffold00029 1300230 1 C T scaffold10972 Both SNP 0008.scaffold00029 1300314 1 A T scaffold10972 Both SNP 0008.scaffold00029 1300429 1 C T scaffold10972 ScafM SNP 0008.scaffold00029 1300548 1 G A scaffold10972 ScafM INDEL 0008.scaffold00029 1300599 24 CCGTAATTGTTTGAATGTTTACCT ........................ scaffold10972 Both SNP 0008.scaffold00029 1300705 1 C G scaffold10972 ScafM SNP 0008.scaffold00029 1300810 1 A G scaffold10972 ScafM INDEL 0008.scaffold00029 1300825 2 CT .. scaffold10972 ScafM INDEL 0008.scaffold00029 1300828 1 C . scaffold10972 ScafM SNP 0008.scaffold00029 1300877 1 G A scaffold10972 Both SNP 0008.scaffold00029 1300889 1 C T scaffold10972 ReadM INDEL 0008.scaffold00029 1300960 2 AT .. - ScafM INDEL 0008.scaffold00029 1301003 4 .... ATTA scaffold10972 Both SNP 0008.scaffold00029 1301195 1 T C scaffold10972 Both SNP 0008.scaffold00029 1301220 1 G A scaffold10972 ReadM SNP 0008.scaffold00029 1301259 1 T A - ReadM SNP 0008.scaffold00029 1301268 1 C T - ReadM SNP 0008.scaffold00029 1301382 1 G A - ReadM SNP 0008.scaffold00029 1301410 1 T C - ReadM INDEL 0008.scaffold00029 1301456 1 A . - ReadM SNP 0008.scaffold00029 1301480 1 A G - ReadM SNP 0008.scaffold00029 1301716 1 T G - ReadM SNP 0008.scaffold00029 1302026 1 T C - ReadM SNP 0008.scaffold00029 1302107 1 T C - ReadM SNP 0008.scaffold00029 1302161 1 G C - ReadM SNP 0008.scaffold00029 1302187 1 T C - ReadM SNP 0008.scaffold00029 1302331 1 T C - ReadM SNP 0008.scaffold00029 1302365 1 T C - ReadM SNP 0008.scaffold00029 1302399 1 A T - ReadM SNP 0008.scaffold00029 1303018 1 C T - ReadM SNP 0008.scaffold00029 1303053 1 G A - ReadM SNP 0008.scaffold00029 1303061 1 C T - ReadM SNP 0008.scaffold00029 1303126 1 G A - ReadM INDEL 0008.scaffold00029 1303136 1 . A - ReadM SNP 0008.scaffold00029 1303190 1 C T - ReadM SNP 0008.scaffold00029 1303205 1 G A - ReadM SNP 0008.scaffold00029 1303294 1 A G - ReadM SNP 0008.scaffold00029 1303300 1 T C - ReadM SNP 0008.scaffold00029 1303371 1 G C - ReadM SNP 0008.scaffold00029 1303473 1 C T - ReadM SNP 0008.scaffold00029 1303477 1 G A - ReadM SNP 0008.scaffold00029 1303489 1 T C - ScafM SNP 0008.scaffold00029 1303530 1 A C scaffold2975 ScafM SNP 0008.scaffold00029 1303553 1 A C scaffold2975 ScafM SNP 0008.scaffold00029 1303566 1 A C scaffold2975 ScafM SNP 0008.scaffold00029 1303575 1 T G scaffold2975 Both SNP 0008.scaffold00029 1303621 1 C T scaffold2975 Both SNP 0008.scaffold00029 1303623 1 A G scaffold2975 ReadM SNP 0008.scaffold00029 1303771 1 C T - ReadM SNP 0008.scaffold00029 1303844 1 C T - ReadM SNP 0008.scaffold00029 1303870 1 T C - ReadM INDEL 0008.scaffold00029 1303889 2 AA .. - ReadM SNP 0008.scaffold00029 1303916 1 A G - ReadM SNP 0008.scaffold00029 1303958 1 A C - ReadM SNP 0008.scaffold00029 1303964 1 T A - ReadM SNP 0008.scaffold00029 1304008 1 C T - ReadM SNP 0008.scaffold00029 1304024 1 C T - ReadM SNP 0008.scaffold00029 1304044 1 C T - ReadM SNP 0008.scaffold00029 1304081 1 T A - ReadM SNP 0008.scaffold00029 1304113 1 T G - ReadM SNP 0008.scaffold00029 1304205 1 C T - ReadM SNP 0008.scaffold00029 1304214 1 G A - ReadM SNP 0008.scaffold00029 1304236 1 G A - ReadM SNP 0008.scaffold00029 1304420 1 A G - ReadM SNP 0008.scaffold00029 1304453 1 A G - ScafM SNP 0008.scaffold00029 1304592 1 C G scaffold2975 ReadM SNP 0008.scaffold00029 1305247 1 T C - Both SNP 0008.scaffold00029 1305649 1 T A scaffold2975 ScafM SNP 0008.scaffold00029 1305697 1 G A scaffold2975 ScafM INDEL 0008.scaffold00029 1305701 2 .. TT scaffold2975 ScafM SNP 0008.scaffold00029 1305717 1 C A scaffold2975 ScafM SNP 0008.scaffold00029 1305752 1 T C scaffold2975 ScafM INDEL 0008.scaffold00029 1305780 1 T . scaffold2975 ReadM SNP 0008.scaffold00029 1305965 1 A G - ReadM SNP 0008.scaffold00029 1306030 1 G C - ScafM SNP 0008.scaffold00029 1307361 1 C T scaffold2975 ScafM SNP 0008.scaffold00029 1307388 1 A G scaffold2975 ScafM SNP 0008.scaffold00029 1307401 1 A G scaffold2975 ScafM SNP 0008.scaffold00029 1307403 1 T C scaffold2975 ScafM SNP 0008.scaffold00029 1307405 1 G T scaffold2975 ScafM SNP 0008.scaffold00029 1307412 1 C T scaffold2975 ScafM SNP 0008.scaffold00029 1307442 1 T C scaffold2975 Both SNP 0008.scaffold00029 1307518 1 A G scaffold2975 Both SNP 0008.scaffold00029 1307713 1 C T scaffold2975 ReadM SNP 0008.scaffold00029 1307803 1 T C - ReadM INDEL 0008.scaffold00029 1307832 1 . A - ReadM SNP 0008.scaffold00029 1308018 1 G A - ReadM SNP 0008.scaffold00029 1308138 1 G T - ReadM SNP 0008.scaffold00029 1308193 1 G A - ReadM SNP 0008.scaffold00029 1308199 1 G A - ReadM SNP 0008.scaffold00029 1308244 1 C T - ReadM SNP 0008.scaffold00029 1308312 1 G A - ReadM SNP 0008.scaffold00029 1309471 1 T A - ReadM SNP 0008.scaffold00029 1309551 1 C T - ReadM SNP 0008.scaffold00029 1309620 1 G C - ReadM SNP 0008.scaffold00029 1309641 1 G A - ReadM SNP 0008.scaffold00029 1309660 1 C A - ReadM SNP 0008.scaffold00029 1309710 1 G A - ReadM SNP 0008.scaffold00029 1309749 1 A C - ReadM SNP 0008.scaffold00029 1309826 1 C T - ReadM SNP 0008.scaffold00029 1309858 1 C A - ReadM SNP 0008.scaffold00029 1309868 1 C T - ReadM SNP 0008.scaffold00029 1309929 1 A C - ReadM SNP 0008.scaffold00029 1309964 1 T C - ReadM SNP 0008.scaffold00029 1309968 1 T C - ReadM SNP 0008.scaffold00029 1309996 1 T C - ReadM SNP 0008.scaffold00029 1310134 1 T C - ReadM SNP 0008.scaffold00029 1310168 1 T C - ReadM SNP 0008.scaffold00029 1310268 1 C A - ReadM SNP 0008.scaffold00029 1310330 1 G C - ReadM SNP 0008.scaffold00029 1310790 1 A C - ReadM SNP 0008.scaffold00029 1311072 1 G A - ReadM SNP 0008.scaffold00029 1311186 1 A C - ReadM SNP 0008.scaffold00029 1311276 1 T A - ReadM SNP 0008.scaffold00029 1311283 1 T A - ReadM SNP 0008.scaffold00029 1311294 1 A C - ReadM SNP 0008.scaffold00029 1311369 1 G A - ReadM SNP 0008.scaffold00029 1311392 1 C A - ReadM SNP 0008.scaffold00029 1311441 1 C A - ReadM SNP 0008.scaffold00029 1311480 1 A G - ReadM SNP 0008.scaffold00029 1311529 1 C T - ReadM SNP 0008.scaffold00029 1311543 1 G A - ReadM SNP 0008.scaffold00029 1311787 1 C G - ReadM SNP 0008.scaffold00029 1311806 1 A G - ReadM SNP 0008.scaffold00029 1311810 1 G A - ReadM SNP 0008.scaffold00029 1311940 1 G A - ReadM SNP 0008.scaffold00029 1311950 1 T C - ReadM SNP 0008.scaffold00029 1311957 1 G T - ReadM SNP 0008.scaffold00029 1312094 1 C T - ReadM SNP 0008.scaffold00029 1312098 1 C G - ReadM SNP 0008.scaffold00029 1312276 1 T C - ReadM SNP 0008.scaffold00029 1312314 1 T G - ReadM SNP 0008.scaffold00029 1312333 1 T A - ReadM SNP 0008.scaffold00029 1312363 1 A T - Both SNP 0008.scaffold00029 1312558 1 T A scaffold4511 Both INDEL 0008.scaffold00029 1312620 1 . T scaffold4511 Both SNP 0008.scaffold00029 1312656 1 A G scaffold4511 Both SNP 0008.scaffold00029 1312732 1 A C scaffold4511 Both SNP 0008.scaffold00029 1312777 1 A G scaffold4511 Both SNP 0008.scaffold00029 1312902 1 T A scaffold4511 Both SNP 0008.scaffold00029 1312912 1 G A scaffold4511 Both SNP 0008.scaffold00029 1312931 1 C T scaffold4511 Both INDEL 0008.scaffold00029 1312979 1 A . scaffold4511 Both SNP 0008.scaffold00029 1313005 1 C T scaffold4511 Both SNP 0008.scaffold00029 1313071 1 C G scaffold4511 Both SNP 0008.scaffold00029 1313078 1 A T scaffold4511 Both SNP 0008.scaffold00029 1313091 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1313130 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1313137 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1313158 2 GG AA scaffold4511 Both SNP 0008.scaffold00029 1313320 1 T G scaffold4511 Both SNP 0008.scaffold00029 1313385 1 A C scaffold4511 Both SNP 0008.scaffold00029 1313390 1 A G scaffold4511 Both SNP 0008.scaffold00029 1313470 1 A G scaffold4511 Both SNP 0008.scaffold00029 1313584 1 A G scaffold4511 Both SNP 0008.scaffold00029 1313587 1 T A scaffold4511 ScafM SNP 0008.scaffold00029 1313653 1 C T scaffold4511 Both SNP 0008.scaffold00029 1313681 1 A C scaffold4511 Both SNP 0008.scaffold00029 1313725 1 C T scaffold4511 Both SNP 0008.scaffold00029 1314008 1 G C scaffold4511 Both SNP 0008.scaffold00029 1314190 1 G T scaffold4511 Both SNP 0008.scaffold00029 1314281 1 C G scaffold4511 Both SNP 0008.scaffold00029 1314389 1 C A scaffold4511 Both SNP 0008.scaffold00029 1314595 1 T C scaffold4511 Both SNP 0008.scaffold00029 1314714 1 T G scaffold4511 Both SNP 0008.scaffold00029 1314762 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1314812 1 A G scaffold4511 ScafM INDEL 0008.scaffold00029 1314814 1 A . scaffold4511 ScafM SNP 0008.scaffold00029 1314822 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1314829 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1314838 1 G A scaffold4511 ScafM INDEL 0008.scaffold00029 1314859 1 T . scaffold4511 ScafM SNP 0008.scaffold00029 1314862 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1314868 1 A T scaffold4511 ScafM SNP 0008.scaffold00029 1314884 1 A G scaffold4511 Both SNP 0008.scaffold00029 1314927 1 T G scaffold4511 Both SNP 0008.scaffold00029 1314971 1 A G scaffold4511 Both INDEL 0008.scaffold00029 1314975 1 . A scaffold4511 Both SNP 0008.scaffold00029 1314989 1 A T scaffold4511 ScafM SNP 0008.scaffold00029 1315104 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1315106 1 A G scaffold4511 Both SNP 0008.scaffold00029 1315136 1 A C scaffold4511 Both SNP 0008.scaffold00029 1315172 1 G A scaffold4511 Both SNP 0008.scaffold00029 1315211 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1315249 1 G C scaffold4511 ScafM SNP 0008.scaffold00029 1315252 3 CCG GGA scaffold4511 ScafM SNP 0008.scaffold00029 1315346 2 GC AA scaffold4511 Both SNP 0008.scaffold00029 1315381 1 T C scaffold4511 ScafM INDEL 0008.scaffold00029 1315392 2 AG .. scaffold4511 ScafM SNP 0008.scaffold00029 1315413 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1315416 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1315421 1 A G scaffold4511 Both SNP 0008.scaffold00029 1315671 1 T C scaffold4511 Both SNP 0008.scaffold00029 1315741 1 C G scaffold4511 Both SNP 0008.scaffold00029 1315759 1 T C scaffold4511 Both SNP 0008.scaffold00029 1315833 1 G C scaffold4511 Both SNP 0008.scaffold00029 1315908 1 T A scaffold4511 ScafM SNP 0008.scaffold00029 1315927 2 AC GA scaffold4511 ScafM SNP 0008.scaffold00029 1315942 1 G A scaffold4511 Both SNP 0008.scaffold00029 1316071 1 G A scaffold4511 Both SNP 0008.scaffold00029 1316075 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1316103 1 A T scaffold4511 ScafM SNP 0008.scaffold00029 1316105 1 T C scaffold4511 Both SNP 0008.scaffold00029 1316130 1 A C scaffold4511 Both SNP 0008.scaffold00029 1316203 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1316221 1 T C scaffold4511 Both SNP 0008.scaffold00029 1316272 1 T C scaffold4511 Both SNP 0008.scaffold00029 1316297 1 G T scaffold4511 Both SNP 0008.scaffold00029 1316316 1 T C scaffold4511 ScafM INDEL 0008.scaffold00029 1316363 5 ..... ACAGT scaffold4511 ScafM SNP 0008.scaffold00029 1316444 2 TT CA scaffold4511 ScafM SNP 0008.scaffold00029 1316477 1 T G scaffold4511 ScafM INDEL 0008.scaffold00029 1316490 1 . A scaffold4511 ScafM SNP 0008.scaffold00029 1316496 1 T A scaffold4511 ScafM INDEL 0008.scaffold00029 1316522 11 ........... ATTCCCAAAAA scaffold4511 ScafM INDEL 0008.scaffold00029 1316524 2 .. TT scaffold4511 ScafM INDEL 0008.scaffold00029 1316527 4 .... CAAT scaffold4511 ScafM INDEL 0008.scaffold00029 1316528 3 ... CCC scaffold4511 ScafM SNP 0008.scaffold00029 1316530 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1316554 1 A C scaffold4511 ScafM SNP 0008.scaffold00029 1316560 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1316569 1 G C scaffold4511 ScafM SNP 0008.scaffold00029 1316623 1 A G scaffold4511 ScafM INDEL 0008.scaffold00029 1316631 8 ATACAAAT ........ scaffold4511 ScafM SNP 0008.scaffold00029 1317004 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1317031 1 A C scaffold4511 ScafM SNP 0008.scaffold00029 1317046 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1317064 1 C G scaffold4511 ScafM SNP 0008.scaffold00029 1317080 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1317085 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1317158 2 GA AG scaffold4511 ScafM SNP 0008.scaffold00029 1317162 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1317181 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1317189 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1317193 2 AA CT scaffold4511 ScafM SNP 0008.scaffold00029 1317201 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1317469 1 T C scaffold6713 ScafM SNP 0008.scaffold00029 1317485 1 G A scaffold6713 ScafM SNP 0008.scaffold00029 1317511 1 A G scaffold6713 ScafM SNP 0008.scaffold00029 1317559 1 C T scaffold6713 ScafM SNP 0008.scaffold00029 1317579 1 T C scaffold6713 ScafM INDEL 0008.scaffold00029 1317621 1 . A scaffold6713 ScafM SNP 0008.scaffold00029 1317626 1 A T scaffold6713 ScafM INDEL 0008.scaffold00029 1317643 1 T . scaffold6713 ScafM SNP 0008.scaffold00029 1317670 1 A T scaffold6713 ScafM INDEL 0008.scaffold00029 1317701 8 ........ AATATTAG scaffold6713 ScafM SNP 0008.scaffold00029 1317717 1 A T scaffold6713 ScafM SNP 0008.scaffold00029 1317873 1 C G scaffold4511 ScafM SNP 0008.scaffold00029 1317886 1 A C scaffold4511 ScafM SNP 0008.scaffold00029 1318000 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1318043 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1318052 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1318290 1 A C scaffold4511 ScafM INDEL 0008.scaffold00029 1318300 1 . A scaffold4511 ScafM SNP 0008.scaffold00029 1318326 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1318328 1 A G scaffold4511 ScafM INDEL 0008.scaffold00029 1318336 4 .... AAAA scaffold4511 ScafM SNP 0008.scaffold00029 1318387 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318433 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1318475 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318516 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1318518 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318520 1 T A scaffold4511 ScafM SNP 0008.scaffold00029 1318523 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1318597 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1318608 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1318636 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1318658 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318662 1 C G scaffold4511 ScafM SNP 0008.scaffold00029 1318691 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318698 2 CC AT scaffold4511 ScafM SNP 0008.scaffold00029 1318705 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318708 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318743 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318780 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1318796 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1318807 2 AA GC scaffold4511 ScafM SNP 0008.scaffold00029 1319089 1 T A scaffold19797 ScafM SNP 0008.scaffold00029 1319096 1 C T scaffold19797 ScafM SNP 0008.scaffold00029 1320768 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1320777 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1320792 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1320816 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1320832 1 T G scaffold4511 ScafM SNP 0008.scaffold00029 1321109 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1321165 1 A T scaffold4511 ScafM SNP 0008.scaffold00029 1321189 2 AA TT scaffold4511 ReadM SNP 0008.scaffold00029 1321372 1 G C - ScafM SNP 0008.scaffold00029 1321817 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1321841 1 C G scaffold4511 ScafM INDEL 0008.scaffold00029 1321847 4 .... ATAG scaffold4511 ScafM SNP 0008.scaffold00029 1321882 1 A C scaffold4511 ScafM SNP 0008.scaffold00029 1321889 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1321909 1 A T scaffold4511 ScafM INDEL 0008.scaffold00029 1321943 4 CGCA .... scaffold4511 ScafM SNP 0008.scaffold00029 1321973 1 G T scaffold4511 ScafM SNP 0008.scaffold00029 1321992 1 A C scaffold4511 ScafM SNP 0008.scaffold00029 1322001 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1322074 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1322119 1 T C scaffold4511 ScafM SNP 0008.scaffold00029 1322128 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1322141 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1322164 1 G A scaffold4511 ScafM SNP 0008.scaffold00029 1322235 1 A G scaffold4511 ScafM SNP 0008.scaffold00029 1322241 1 C T scaffold4511 ScafM SNP 0008.scaffold00029 1322249 1 C G scaffold4511 ReadM SNP 0008.scaffold00029 1330887 1 A T - ReadM SNP 0008.scaffold00029 1330914 1 G C - ReadM SNP 0008.scaffold00029 1331247 1 C G - ReadM SNP 0008.scaffold00029 1331255 1 T C - ReadM SNP 0008.scaffold00029 1331268 1 G A - ReadM SNP 0008.scaffold00029 1331343 1 G A - ScafM SNP 0008.scaffold00029 1333117 1 A G scaffold6890 ScafM INDEL 0008.scaffold00029 1333131 1 . A scaffold6890 ScafM SNP 0008.scaffold00029 1333139 2 CC TT scaffold6890 ScafM SNP 0008.scaffold00029 1333155 1 A C scaffold6890 ScafM SNP 0008.scaffold00029 1333172 1 T G scaffold6890 ScafM SNP 0008.scaffold00029 1333179 1 T A scaffold6890 ScafM SNP 0008.scaffold00029 1333183 1 A C scaffold6890 ScafM SNP 0008.scaffold00029 1333202 1 A T scaffold6890 ScafM INDEL 0008.scaffold00029 1333214 1 . C scaffold6890 ScafM SNP 0008.scaffold00029 1333217 1 A C scaffold6890 ScafM SNP 0008.scaffold00029 1333219 1 A G scaffold6890 ScafM SNP 0008.scaffold00029 1333226 1 G A scaffold6890 ScafM INDEL 0008.scaffold00029 1333289 5 TGCCA ..... scaffold6890 ScafM SNP 0008.scaffold00029 1333312 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1333339 1 G A scaffold6890 ScafM SNP 0008.scaffold00029 1333348 1 G A scaffold6890 ScafM INDEL 0008.scaffold00029 1333395 3 AAG ... scaffold6890 ScafM SNP 0008.scaffold00029 1333404 1 C A scaffold6890 ScafM INDEL 0008.scaffold00029 1333426 1 . A scaffold6890 ScafM SNP 0008.scaffold00029 1333431 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1333434 1 A G scaffold6890 ScafM INDEL 0008.scaffold00029 1333464 2 .T CG scaffold6890 ScafM SNP 0008.scaffold00029 1333509 1 A C scaffold6890 ScafM INDEL 0008.scaffold00029 1333512 1 . T scaffold6890 ScafM SNP 0008.scaffold00029 1333544 1 A G scaffold6890 ScafM SNP 0008.scaffold00029 1333583 1 G A scaffold6890 ScafM SNP 0008.scaffold00029 1333603 1 C A scaffold6890 ScafM SNP 0008.scaffold00029 1333635 1 T G scaffold6890 ScafM SNP 0008.scaffold00029 1333657 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1333676 2 CC TA scaffold6890 ScafM SNP 0008.scaffold00029 1333686 1 C G scaffold6890 ScafM SNP 0008.scaffold00029 1333698 1 G A scaffold6890 ScafM SNP 0008.scaffold00029 1333762 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1333811 1 A C scaffold6890 ScafM SNP 0008.scaffold00029 1333879 1 C T scaffold6890 ScafM INDEL 0008.scaffold00029 1333945 25 TACGATTATAGATTAAACTCTAATT ......................... scaffold6890 ScafM SNP 0008.scaffold00029 1334007 1 A C scaffold6890 ScafM SNP 0008.scaffold00029 1334059 1 T C scaffold6890 ReadM SNP 0008.scaffold00029 1334417 1 T A - ScafM INDEL 0008.scaffold00029 1334577 8 ........ ACTTATAT scaffold6890 Both SNP 0008.scaffold00029 1334698 1 G A scaffold6890 Both SNP 0008.scaffold00029 1334919 1 C T scaffold6890 Both SNP 0008.scaffold00029 1334922 1 T A scaffold6890 Both SNP 0008.scaffold00029 1334974 1 C T scaffold6890 Both SNP 0008.scaffold00029 1335064 1 C A scaffold6890 Both SNP 0008.scaffold00029 1335094 1 A G scaffold6890 Both SNP 0008.scaffold00029 1335522 1 A T scaffold6890 Both SNP 0008.scaffold00029 1335550 1 C T scaffold6890 ScafM INDEL 0008.scaffold00029 1335669 2 AC .. scaffold6890 Both SNP 0008.scaffold00029 1335975 1 A T scaffold6890 Both SNP 0008.scaffold00029 1335983 1 C T scaffold6890 Both SNP 0008.scaffold00029 1336128 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1336192 2 TA AG scaffold6890 ScafM SNP 0008.scaffold00029 1336195 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1336225 1 T C scaffold6890 ScafM SNP 0008.scaffold00029 1336237 1 G A scaffold6890 ScafM INDEL 0008.scaffold00029 1336243 7 AAAAACA ....... scaffold6890 ScafM SNP 0008.scaffold00029 1336255 1 A G scaffold6890 ScafM SNP 0008.scaffold00029 1336278 1 G A scaffold6890 ScafM SNP 0008.scaffold00029 1336283 1 G C scaffold6890 ScafM SNP 0008.scaffold00029 1336291 1 T C scaffold6890 ScafM SNP 0008.scaffold00029 1336293 1 T C scaffold6890 ReadM INDEL 0008.scaffold00029 1336571 1 . A - ScafM INDEL 0008.scaffold00029 1336571 2 .T AA scaffold6890 ScafM SNP 0008.scaffold00029 1336630 1 A G scaffold6890 ScafM INDEL 0008.scaffold00029 1336633 1 . T scaffold6890 ScafM SNP 0008.scaffold00029 1336639 1 A T scaffold6890 Both SNP 0008.scaffold00029 1336672 1 C A scaffold6890 Both SNP 0008.scaffold00029 1336956 1 A G scaffold6890 Both SNP 0008.scaffold00029 1336994 1 A T scaffold6890 ReadM SNP 0008.scaffold00029 1337246 1 T A - ReadM SNP 0008.scaffold00029 1337298 1 A G - ScafM SNP 0008.scaffold00029 1337366 1 G A scaffold6890 ScafM INDEL 0008.scaffold00029 1337388 1 . T scaffold6890 ScafM INDEL 0008.scaffold00029 1337398 2 GA .C scaffold6890 ScafM SNP 0008.scaffold00029 1337423 1 T C scaffold6890 ReadM SNP 0008.scaffold00029 1337618 1 A G - ScafM SNP 0008.scaffold00029 1337840 1 G T scaffold6890 Both SNP 0008.scaffold00029 1338011 1 T G scaffold6890 Both SNP 0008.scaffold00029 1338028 1 C A scaffold6890 Both SNP 0008.scaffold00029 1338099 1 C G scaffold6890 Both SNP 0008.scaffold00029 1338104 1 C T scaffold6890 ScafM SNP 0008.scaffold00029 1338257 1 C T scaffold6890 Both INDEL 0008.scaffold00029 1338431 3 TAA ... scaffold6890 Both SNP 0008.scaffold00029 1338563 1 A G scaffold6890 Both INDEL 0008.scaffold00029 1338854 1 A . scaffold6890 Both INDEL 0008.scaffold00029 1338960 2 .. AG scaffold6890 ScafM SNP 0008.scaffold00029 1339016 1 A G scaffold6890 Both SNP 0008.scaffold00029 1339244 1 A G scaffold6890 ScafM INDEL 0008.scaffold00029 1339373 34 TTTTTTTTTTTCGAATCGAATCTAAGATAATAAT .................................. scaffold6890 Both SNP 0008.scaffold00029 1339433 1 C G scaffold6890 Both SNP 0008.scaffold00029 1339492 1 A G scaffold6890 ReadM SNP 0008.scaffold00029 1339735 1 A C - Both SNP 0008.scaffold00029 1339795 1 T C scaffold6890 ReadM SNP 0008.scaffold00029 1339891 1 T C - ReadM SNP 0008.scaffold00029 1339980 1 A G - ScafM SNP 0008.scaffold00029 1340033 1 T A scaffold6890 ScafM SNP 0008.scaffold00029 1340152 1 T C scaffold6890 ScafM SNP 0008.scaffold00029 1341199 2 CG TT scaffold6890 ScafM SNP 0008.scaffold00029 1341224 1 A G scaffold6890 ScafM SNP 0008.scaffold00029 1341262 1 T C scaffold6890 Both SNP 0008.scaffold00029 1341509 1 A T scaffold6890 Both SNP 0008.scaffold00029 1341525 1 A G scaffold6890 ReadM SNP 0008.scaffold00029 1341622 1 T G - ReadM SNP 0008.scaffold00029 1341673 1 C T - ReadM SNP 0008.scaffold00029 1341717 1 G T - ReadM SNP 0008.scaffold00029 1341745 1 G T - ReadM SNP 0008.scaffold00029 1341844 1 T C - ReadM SNP 0008.scaffold00029 1341851 1 A T - ReadM SNP 0008.scaffold00029 1341970 1 A G - ReadM SNP 0008.scaffold00029 1342017 1 T A - ReadM SNP 0008.scaffold00029 1342230 1 G C - ReadM SNP 0008.scaffold00029 1342332 1 A G - ReadM SNP 0008.scaffold00029 1342381 1 T C - ReadM SNP 0008.scaffold00029 1342429 1 A C - ReadM SNP 0008.scaffold00029 1342585 1 T C - ReadM SNP 0008.scaffold00029 1342605 1 T C - Both INDEL 0008.scaffold00029 1342694 1 . T scaffold6890 ReadM INDEL 0008.scaffold00029 1342866 1 A . - ReadM SNP 0008.scaffold00029 1343104 1 T G - ReadM SNP 0008.scaffold00029 1343215 1 C T - ReadM SNP 0008.scaffold00029 1343279 1 T C - ReadM SNP 0008.scaffold00029 1343287 1 A G - ReadM SNP 0008.scaffold00029 1343480 1 T G - ReadM SNP 0008.scaffold00029 1343975 1 G A - ReadM SNP 0008.scaffold00029 1344275 1 T C - ScafM SNP 0008.scaffold00029 1344944 1 C A scaffold3284 ScafM SNP 0008.scaffold00029 1344946 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1345011 1 A C scaffold3284 ScafM INDEL 0008.scaffold00029 1345016 1 A . scaffold3284 ScafM SNP 0008.scaffold00029 1345027 2 AG TT scaffold3284 ScafM SNP 0008.scaffold00029 1345035 2 GG TA scaffold3284 ScafM INDEL 0008.scaffold00029 1345044 1 . T scaffold3284 ScafM SNP 0008.scaffold00029 1345047 1 C T scaffold3284 ScafM SNP 0008.scaffold00029 1345063 1 A C scaffold3284 ScafM SNP 0008.scaffold00029 1345072 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1345090 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1345096 1 C A scaffold3284 ScafM SNP 0008.scaffold00029 1345674 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1345683 1 C T scaffold3284 ScafM SNP 0008.scaffold00029 1345721 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1345736 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1345739 1 A C scaffold3284 ScafM SNP 0008.scaffold00029 1345750 1 C T scaffold3284 ReadM SNP 0008.scaffold00029 1345763 1 C T - ScafM SNP 0008.scaffold00029 1345767 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1345770 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1345772 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1345784 1 A T scaffold3284 ScafM SNP 0008.scaffold00029 1345803 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1345833 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1345883 1 C T scaffold3284 ReadM SNP 0008.scaffold00029 1345887 1 G C - ScafM SNP 0008.scaffold00029 1345888 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1345891 1 A T scaffold3284 ScafM SNP 0008.scaffold00029 1345910 1 A C scaffold3284 ReadM SNP 0008.scaffold00029 1345918 1 G A - ScafM SNP 0008.scaffold00029 1345925 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1345945 1 T A scaffold3284 ScafM INDEL 0008.scaffold00029 1346060 1 . G scaffold3284 ScafM SNP 0008.scaffold00029 1346077 1 T C scaffold3284 ReadM SNP 0008.scaffold00029 1346081 1 G A - ScafM SNP 0008.scaffold00029 1346085 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1346105 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1346110 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1346124 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1346146 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1346159 3 TAA GGT scaffold3284 ScafM SNP 0008.scaffold00029 1346180 1 G A scaffold3284 ScafM SNP 0008.scaffold00029 1346196 1 C G scaffold3284 ScafM SNP 0008.scaffold00029 1346202 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1346226 2 GT AG scaffold3284 ScafM SNP 0008.scaffold00029 1346238 1 C A scaffold3284 ScafM SNP 0008.scaffold00029 1346246 1 T C scaffold3284 ScafM SNP 0008.scaffold00029 1346249 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1346292 1 A G scaffold3284 ScafM SNP 0008.scaffold00029 1346338 1 T G scaffold3284 ReadM SNP 0008.scaffold00029 1346542 1 C T - ReadM SNP 0008.scaffold00029 1346611 1 C T - ReadM SNP 0008.scaffold00029 1346646 1 A G - ReadM INDEL 0008.scaffold00029 1346709 1 . C - ReadM SNP 0008.scaffold00029 1346758 1 A G - ReadM SNP 0008.scaffold00029 1347040 1 A C - ReadM SNP 0008.scaffold00029 1347274 1 G A - ReadM SNP 0008.scaffold00029 1347370 1 T C - ReadM SNP 0008.scaffold00029 1347549 1 T G - ReadM SNP 0008.scaffold00029 1348397 1 G A - ReadM SNP 0008.scaffold00029 1348451 1 A G - ReadM SNP 0008.scaffold00029 1348459 1 A G - ReadM SNP 0008.scaffold00029 1348589 1 C T - ReadM SNP 0008.scaffold00029 1350057 1 A C - ReadM SNP 0008.scaffold00029 1351357 1 G A - ReadM SNP 0008.scaffold00029 1352525 1 A G - Both SNP 0008.scaffold00029 1352534 1 G A scaffold45378 ScafM SNP 0008.scaffold00029 1352637 1 G T scaffold45378 ScafM INDEL 0008.scaffold00029 1353863 2 .. TT scaffold45378 ScafM SNP 0008.scaffold00029 1354660 1 T A scaffold3060 ScafM SNP 0008.scaffold00029 1354672 1 G T scaffold3060 ScafM SNP 0008.scaffold00029 1354776 1 C T scaffold3060 ScafM INDEL 0008.scaffold00029 1354778 2 GC .. scaffold3060 ScafM SNP 0008.scaffold00029 1354801 1 G T scaffold3060 ScafM SNP 0008.scaffold00029 1354884 1 T C scaffold3060 ScafM SNP 0008.scaffold00029 1354945 1 G T scaffold3060 ScafM SNP 0008.scaffold00029 1355012 1 A T scaffold3060 Both SNP 0008.scaffold00029 1355245 1 T C scaffold3060 Both SNP 0008.scaffold00029 1355248 1 C T scaffold3060 ScafM INDEL 0008.scaffold00029 1355371 1 . A scaffold3060 ScafM SNP 0008.scaffold00029 1355378 1 T G scaffold3060 ScafM SNP 0008.scaffold00029 1355412 1 T C scaffold3060 ScafM SNP 0008.scaffold00029 1355416 1 T C scaffold3060 ScafM INDEL 0008.scaffold00029 1355418 7 TGTATGT ....... scaffold3060 ScafM INDEL 0008.scaffold00029 1355426 6 TGGCCT ...... scaffold3060 ScafM INDEL 0008.scaffold00029 1355437 1 T . scaffold3060 ScafM INDEL 0008.scaffold00029 1355439 9 TTGTCCTCT ......... scaffold3060 ScafM INDEL 0008.scaffold00029 1355449 3 GTG ... scaffold3060 ReadM SNP 0008.scaffold00029 1355829 1 T C - ReadM SNP 0008.scaffold00029 1355921 1 G A - ReadM SNP 0008.scaffold00029 1355951 1 C T - ReadM SNP 0008.scaffold00029 1356367 1 A C - ReadM SNP 0008.scaffold00029 1356481 1 A G - ScafM SNP 0008.scaffold00029 1358226 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 1358258 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 1358267 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 1358376 1 G A scaffold5116 ScafM SNP 0008.scaffold00029 1358379 1 T C scaffold5116 ScafM SNP 0008.scaffold00029 1358450 1 T A scaffold5116 ScafM SNP 0008.scaffold00029 1358460 2 TA CT scaffold5116 ScafM SNP 0008.scaffold00029 1358508 1 G C scaffold5116 ReadM SNP 0008.scaffold00029 1358790 1 T G - ReadM SNP 0008.scaffold00029 1359793 1 A G - ReadM SNP 0008.scaffold00029 1360044 1 T C - ScafM SNP 0008.scaffold00029 1360162 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1360190 1 G C scaffold1184 ScafM SNP 0008.scaffold00029 1360206 1 T C scaffold1184 Both SNP 0008.scaffold00029 1360237 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1360405 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1360409 1 A T scaffold1184 Both SNP 0008.scaffold00029 1360512 1 G A scaffold1184 Both SNP 0008.scaffold00029 1360638 1 T C scaffold1184 Both SNP 0008.scaffold00029 1360798 1 T A scaffold1184 ScafM INDEL 0008.scaffold00029 1360903 32 GATGATGCTTCAGGGAGATGATGCTTCAGGGA ................................ scaffold1184 ScafM SNP 0008.scaffold00029 1360943 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1360954 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1361004 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1361010 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1361053 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1361057 1 T C scaffold1184 Both SNP 0008.scaffold00029 1361090 1 G A scaffold1184 Both SNP 0008.scaffold00029 1361213 1 T C scaffold1184 Both SNP 0008.scaffold00029 1361241 1 G A scaffold1184 ReadM SNP 0008.scaffold00029 1361335 1 A G - ReadM INDEL 0008.scaffold00029 1361498 1 A . - ReadM SNP 0008.scaffold00029 1361862 1 A C - ReadM SNP 0008.scaffold00029 1361950 1 T G - ReadM SNP 0008.scaffold00029 1362001 1 T C - ReadM SNP 0008.scaffold00029 1362037 1 G T - ReadM SNP 0008.scaffold00029 1362097 1 G A - ReadM SNP 0008.scaffold00029 1362291 1 C T - Both SNP 0008.scaffold00029 1362671 1 G A scaffold1184 Both SNP 0008.scaffold00029 1362759 1 G T scaffold1184 Both SNP 0008.scaffold00029 1363035 1 G A scaffold1184 Both SNP 0008.scaffold00029 1363183 1 T C scaffold1184 Both SNP 0008.scaffold00029 1363187 1 G C scaffold1184 Both SNP 0008.scaffold00029 1363316 1 C A scaffold1184 Both SNP 0008.scaffold00029 1363502 1 T C scaffold1184 Both SNP 0008.scaffold00029 1363513 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1363557 1 G A scaffold1184 Both SNP 0008.scaffold00029 1363748 1 C T scaffold1184 Both SNP 0008.scaffold00029 1363874 1 T C scaffold1184 Both SNP 0008.scaffold00029 1363977 1 G A scaffold1184 Both SNP 0008.scaffold00029 1364041 1 A G scaffold1184 Both SNP 0008.scaffold00029 1364083 1 C A scaffold1184 Both SNP 0008.scaffold00029 1364190 1 T A scaffold1184 Both SNP 0008.scaffold00029 1364261 1 A G scaffold1184 Both SNP 0008.scaffold00029 1364292 1 G A scaffold1184 Both SNP 0008.scaffold00029 1364381 1 C A scaffold1184 ReadM INDEL 0008.scaffold00029 1364395 1 . A - ScafM INDEL 0008.scaffold00029 1364395 2 .G AT scaffold1184 ReadM SNP 0008.scaffold00029 1364755 1 G C - ReadM SNP 0008.scaffold00029 1364784 1 A G - ReadM SNP 0008.scaffold00029 1364820 1 G A - ReadM SNP 0008.scaffold00029 1364848 1 C G - ReadM SNP 0008.scaffold00029 1364856 1 A G - ReadM INDEL 0008.scaffold00029 1364945 1 . G - ReadM SNP 0008.scaffold00029 1365126 1 C T - ReadM SNP 0008.scaffold00029 1365143 1 A G - ReadM SNP 0008.scaffold00029 1365237 1 A G - ReadM SNP 0008.scaffold00029 1365459 1 A G - ReadM SNP 0008.scaffold00029 1365581 1 A G - ReadM SNP 0008.scaffold00029 1365650 1 A T - ReadM SNP 0008.scaffold00029 1365684 1 G A - ReadM INDEL 0008.scaffold00029 1365699 1 A . - ReadM SNP 0008.scaffold00029 1365805 1 T C - ReadM SNP 0008.scaffold00029 1365860 1 A T - ReadM SNP 0008.scaffold00029 1365864 1 G T - ReadM SNP 0008.scaffold00029 1365883 1 G C - ReadM SNP 0008.scaffold00029 1365937 1 T C - ReadM SNP 0008.scaffold00029 1366020 1 G A - ReadM SNP 0008.scaffold00029 1366056 1 C A - ReadM SNP 0008.scaffold00029 1366084 1 C A - ReadM INDEL 0008.scaffold00029 1366332 2 AG .. - ReadM SNP 0008.scaffold00029 1366369 1 A C - ReadM SNP 0008.scaffold00029 1366396 1 A G - ReadM SNP 0008.scaffold00029 1366420 1 G A - ReadM SNP 0008.scaffold00029 1366517 1 T C - ReadM SNP 0008.scaffold00029 1366527 1 G A - ReadM SNP 0008.scaffold00029 1366563 1 C T - ReadM SNP 0008.scaffold00029 1366655 1 G T - ReadM SNP 0008.scaffold00029 1366727 1 T C - ReadM SNP 0008.scaffold00029 1366920 1 C G - ReadM SNP 0008.scaffold00029 1367212 1 C T - ReadM SNP 0008.scaffold00029 1367366 1 A G - ReadM SNP 0008.scaffold00029 1367385 1 T C - Both SNP 0008.scaffold00029 1367771 1 A G scaffold1184 Both SNP 0008.scaffold00029 1367774 1 T G scaffold1184 Both SNP 0008.scaffold00029 1367853 1 T C scaffold1184 Both SNP 0008.scaffold00029 1367855 1 T A scaffold1184 ReadM SNP 0008.scaffold00029 1367958 1 A T - ReadM SNP 0008.scaffold00029 1368042 1 G A - ReadM SNP 0008.scaffold00029 1368076 1 G A - ReadM SNP 0008.scaffold00029 1368242 1 T C - Both SNP 0008.scaffold00029 1368473 1 G C scaffold1184 Both SNP 0008.scaffold00029 1368508 1 A G scaffold1184 Both SNP 0008.scaffold00029 1368611 1 C T scaffold1184 Both SNP 0008.scaffold00029 1368658 1 G A scaffold1184 Both SNP 0008.scaffold00029 1368743 1 G A scaffold1184 Both SNP 0008.scaffold00029 1368844 1 T C scaffold1184 Both SNP 0008.scaffold00029 1368851 1 C A scaffold1184 ReadM SNP 0008.scaffold00029 1369168 1 T C - ReadM SNP 0008.scaffold00029 1369271 1 A T - ReadM SNP 0008.scaffold00029 1369275 1 A G - ReadM SNP 0008.scaffold00029 1369314 1 T C - ReadM SNP 0008.scaffold00029 1369364 1 C T - ReadM SNP 0008.scaffold00029 1369454 1 G A - ReadM SNP 0008.scaffold00029 1369459 1 G A - ReadM SNP 0008.scaffold00029 1369642 1 C T - ReadM SNP 0008.scaffold00029 1369678 1 A C - ReadM SNP 0008.scaffold00029 1369766 1 T G - ReadM SNP 0008.scaffold00029 1369845 1 G A - ReadM SNP 0008.scaffold00029 1369884 1 T C - ReadM SNP 0008.scaffold00029 1370085 1 C T - ReadM SNP 0008.scaffold00029 1370216 1 G A - ReadM SNP 0008.scaffold00029 1370269 1 C A - ReadM SNP 0008.scaffold00029 1370399 1 C T - ReadM SNP 0008.scaffold00029 1370408 1 A G - ReadM SNP 0008.scaffold00029 1370490 1 G A - ReadM SNP 0008.scaffold00029 1370607 1 A G - ReadM SNP 0008.scaffold00029 1370680 1 T A - ReadM SNP 0008.scaffold00029 1370727 1 G A - ReadM SNP 0008.scaffold00029 1370752 1 G A - ReadM SNP 0008.scaffold00029 1370776 1 T C - ReadM SNP 0008.scaffold00029 1370800 1 G C - ReadM SNP 0008.scaffold00029 1370840 1 G A - ReadM SNP 0008.scaffold00029 1370958 1 G A - ReadM SNP 0008.scaffold00029 1370997 1 G T - Both SNP 0008.scaffold00029 1371057 1 G A scaffold1184 Both SNP 0008.scaffold00029 1371104 1 G A scaffold1184 ReadM SNP 0008.scaffold00029 1371205 1 G A - ReadM SNP 0008.scaffold00029 1371246 1 A T - ReadM SNP 0008.scaffold00029 1371352 1 A C - ReadM SNP 0008.scaffold00029 1371454 1 A G - ReadM SNP 0008.scaffold00029 1371514 1 A G - ReadM SNP 0008.scaffold00029 1371640 1 A G - ReadM SNP 0008.scaffold00029 1371668 1 T C - ReadM INDEL 0008.scaffold00029 1371694 1 A . - ReadM SNP 0008.scaffold00029 1371830 1 G C - ReadM SNP 0008.scaffold00029 1371844 1 T C - ReadM SNP 0008.scaffold00029 1371910 1 C T - ReadM SNP 0008.scaffold00029 1371972 1 A G - ReadM SNP 0008.scaffold00029 1371980 1 A T - ReadM SNP 0008.scaffold00029 1371992 1 T C - ReadM SNP 0008.scaffold00029 1372104 1 T G - ReadM SNP 0008.scaffold00029 1372459 1 C T - ReadM SNP 0008.scaffold00029 1372462 1 T A - ReadM SNP 0008.scaffold00029 1372690 1 G C - ReadM SNP 0008.scaffold00029 1373096 1 A G - ReadM SNP 0008.scaffold00029 1373296 1 G C - ReadM SNP 0008.scaffold00029 1373364 1 C A - ReadM SNP 0008.scaffold00029 1373421 1 A G - ReadM SNP 0008.scaffold00029 1373529 1 A G - ReadM SNP 0008.scaffold00029 1373682 1 T C - ReadM SNP 0008.scaffold00029 1373725 1 T G - Both SNP 0008.scaffold00029 1373932 1 A C scaffold1184 Both SNP 0008.scaffold00029 1374031 1 G T scaffold1184 Both SNP 0008.scaffold00029 1374084 1 G A scaffold1184 Both SNP 0008.scaffold00029 1374151 1 A C scaffold1184 Both SNP 0008.scaffold00029 1374427 1 C T scaffold1184 Both SNP 0008.scaffold00029 1374433 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1374438 1 G T scaffold1184 ReadM INDEL 0008.scaffold00029 1374792 1 C . - Both SNP 0008.scaffold00029 1374879 1 T C scaffold1184 Both SNP 0008.scaffold00029 1374988 1 T A scaffold1184 ScafM SNP 0008.scaffold00029 1375044 1 A T scaffold1184 ScafM INDEL 0008.scaffold00029 1375078 15 TATCATTTCTTAGCA ............... scaffold1184 ScafM INDEL 0008.scaffold00029 1375095 3 TAG ... scaffold1184 ScafM INDEL 0008.scaffold00029 1375099 5 GGTTT ..... scaffold1184 ScafM INDEL 0008.scaffold00029 1375107 3 ATT ... scaffold1184 ScafM SNP 0008.scaffold00029 1375111 1 C A scaffold1184 ScafM INDEL 0008.scaffold00029 1375113 1 C . scaffold1184 Both SNP 0008.scaffold00029 1375196 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1375232 1 C T scaffold1184 ReadM SNP 0008.scaffold00029 1375335 1 T C - ScafM INDEL 0008.scaffold00029 1375998 1 A . scaffold1184 ScafM INDEL 0008.scaffold00029 1376090 1 T . scaffold1184 ReadM SNP 0008.scaffold00029 1376317 1 A C - ReadM SNP 0008.scaffold00029 1376333 1 T C - ReadM SNP 0008.scaffold00029 1376371 1 C T - Both INDEL 0008.scaffold00029 1376716 1 G . scaffold1184 ScafM INDEL 0008.scaffold00029 1376787 2 .. AA scaffold1184 ScafM SNP 0008.scaffold00029 1376798 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1376809 1 A G scaffold1184 ReadM SNP 0008.scaffold00029 1377069 1 C T - Both SNP 0008.scaffold00029 1377110 1 C A scaffold1184 Both SNP 0008.scaffold00029 1377166 1 G A scaffold1184 Both SNP 0008.scaffold00029 1377313 1 G A scaffold1184 Both SNP 0008.scaffold00029 1377376 1 C A scaffold1184 Both SNP 0008.scaffold00029 1377397 1 G T scaffold1184 ScafM SNP 0008.scaffold00029 1377403 1 T G scaffold1184 ScafM SNP 0008.scaffold00029 1377448 2 AT GA scaffold1184 ScafM SNP 0008.scaffold00029 1377463 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1377543 1 T G scaffold1184 ScafM INDEL 0008.scaffold00029 1378382 1 C . scaffold1184 ScafM SNP 0008.scaffold00029 1378385 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1378414 1 G A scaffold1184 ScafM INDEL 0008.scaffold00029 1378431 1 . T scaffold1184 ScafM SNP 0008.scaffold00029 1378433 1 A C scaffold1184 ScafM SNP 0008.scaffold00029 1378739 1 G C scaffold1184 Both SNP 0008.scaffold00029 1378927 1 A C scaffold1184 Both SNP 0008.scaffold00029 1378935 1 A T scaffold1184 Both SNP 0008.scaffold00029 1378976 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1379334 1 C G scaffold1184 ScafM SNP 0008.scaffold00029 1379336 1 A C scaffold1184 ReadM SNP 0008.scaffold00029 1379521 1 C T - Both SNP 0008.scaffold00029 1379778 1 G T scaffold1184 Both SNP 0008.scaffold00029 1379857 1 C T scaffold1184 Both SNP 0008.scaffold00029 1379990 1 C G scaffold1184 ScafM SNP 0008.scaffold00029 1380127 1 T C scaffold1184 ScafM INDEL 0008.scaffold00029 1380211 1 C . scaffold1184 ScafM INDEL 0008.scaffold00029 1380354 1 A . scaffold1184 ScafM SNP 0008.scaffold00029 1380405 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1380454 3 TTA AAT scaffold1184 Both SNP 0008.scaffold00029 1380724 1 A C scaffold1184 ScafM SNP 0008.scaffold00029 1380873 1 G C scaffold1184 Both SNP 0008.scaffold00029 1380900 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1380915 1 G A scaffold1184 ReadM SNP 0008.scaffold00029 1381157 1 A C - ReadM SNP 0008.scaffold00029 1381267 1 G A - ReadM SNP 0008.scaffold00029 1381423 1 T C - ReadM SNP 0008.scaffold00029 1381817 1 G A - ReadM SNP 0008.scaffold00029 1382281 1 T C - ReadM SNP 0008.scaffold00029 1382304 1 C T - ReadM SNP 0008.scaffold00029 1382410 1 A G - ReadM SNP 0008.scaffold00029 1382622 1 C G - ReadM SNP 0008.scaffold00029 1383016 1 A C - Both SNP 0008.scaffold00029 1383211 1 G T scaffold1184 Both SNP 0008.scaffold00029 1383226 1 G A scaffold1184 Both SNP 0008.scaffold00029 1383253 1 C T scaffold1184 Both SNP 0008.scaffold00029 1383299 1 G A scaffold1184 ScafM INDEL 0008.scaffold00029 1383430 1 T . scaffold1184 ScafM INDEL 0008.scaffold00029 1383494 3 TGT ... scaffold1184 ScafM SNP 0008.scaffold00029 1383552 1 T A scaffold1184 Both SNP 0008.scaffold00029 1383575 1 T C scaffold1184 Both INDEL 0008.scaffold00029 1383625 1 . C scaffold1184 Both SNP 0008.scaffold00029 1383659 1 A C scaffold1184 Both SNP 0008.scaffold00029 1383734 1 T A scaffold1184 Both SNP 0008.scaffold00029 1383742 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1383793 2 CT AA scaffold1184 ScafM SNP 0008.scaffold00029 1383971 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1383976 1 G T scaffold1184 ScafM SNP 0008.scaffold00029 1384011 1 A G scaffold1184 ScafM INDEL 0008.scaffold00029 1384403 1 . T scaffold1184 ReadM SNP 0008.scaffold00029 1384480 1 A C - ReadM SNP 0008.scaffold00029 1384557 1 T C - ReadM SNP 0008.scaffold00029 1384583 1 A G - Both INDEL 0008.scaffold00029 1384644 1 . T scaffold1184 Both SNP 0008.scaffold00029 1384728 1 C T scaffold1184 Both SNP 0008.scaffold00029 1384852 1 G C scaffold1184 ReadM SNP 0008.scaffold00029 1384914 1 T C - ReadM INDEL 0008.scaffold00029 1385067 1 . C - ReadM SNP 0008.scaffold00029 1385110 1 C T - ReadM SNP 0008.scaffold00029 1385137 1 C G - ReadM SNP 0008.scaffold00029 1385155 1 C T - ScafM INDEL 0008.scaffold00029 1385802 1 . T scaffold1184 ScafM SNP 0008.scaffold00029 1385876 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1385963 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1385965 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1386018 1 G T scaffold1184 ScafM SNP 0008.scaffold00029 1386085 1 G T scaffold1184 ScafM SNP 0008.scaffold00029 1386312 1 C A scaffold1184 ScafM SNP 0008.scaffold00029 1386436 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1386511 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1386531 1 G A scaffold1184 ScafM SNP 0008.scaffold00029 1386552 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1386559 2 TC CG scaffold1184 ScafM INDEL 0008.scaffold00029 1386617 7 ....... TGGTCAA scaffold1184 ScafM SNP 0008.scaffold00029 1386642 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1386741 1 G T scaffold1184 ScafM SNP 0008.scaffold00029 1386820 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1386892 1 C G scaffold1184 Both INDEL 0008.scaffold00029 1387159 2 .. TC scaffold1184 Both SNP 0008.scaffold00029 1387208 1 C T scaffold1184 ScafM SNP 0008.scaffold00029 1387264 1 G C scaffold1184 ScafM SNP 0008.scaffold00029 1387351 1 G A scaffold1184 ScafM INDEL 0008.scaffold00029 1387408 2 .. TC scaffold1184 ScafM SNP 0008.scaffold00029 1387456 1 A C scaffold1184 ScafM SNP 0008.scaffold00029 1387516 1 T C scaffold1184 ReadM SNP 0008.scaffold00029 1390016 1 T C - ReadM SNP 0008.scaffold00029 1390205 1 G A - ReadM SNP 0008.scaffold00029 1390287 1 G A - ReadM SNP 0008.scaffold00029 1390377 1 G T - Both SNP 0008.scaffold00029 1390409 1 A T scaffold1184 Both SNP 0008.scaffold00029 1390415 1 C T scaffold1184 ReadM SNP 0008.scaffold00029 1390505 1 T A - Both SNP 0008.scaffold00029 1390515 1 T C scaffold1184 Both SNP 0008.scaffold00029 1390519 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1390847 1 G A scaffold1184 ReadM INDEL 0008.scaffold00029 1393194 2 GG .. - ReadM SNP 0008.scaffold00029 1393236 1 T C - ScafM SNP 0008.scaffold00029 1393359 1 C A scaffold1184 Both SNP 0008.scaffold00029 1393538 1 A T scaffold1184 ScafM SNP 0008.scaffold00029 1393589 1 G T scaffold1184 ReadM SNP 0008.scaffold00029 1395676 1 G A - ReadM SNP 0008.scaffold00029 1395685 1 T C - ReadM SNP 0008.scaffold00029 1395721 1 G A - ReadM INDEL 0008.scaffold00029 1395767 1 A . - ReadM SNP 0008.scaffold00029 1395805 1 A G - ReadM SNP 0008.scaffold00029 1396047 1 G C - ReadM SNP 0008.scaffold00029 1396145 1 G A - ScafM INDEL 0008.scaffold00029 1396532 2 .. TT scaffold1184 ScafM SNP 0008.scaffold00029 1396544 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1396602 1 A G scaffold1184 ScafM SNP 0008.scaffold00029 1397665 1 C G scaffold1184 ScafM SNP 0008.scaffold00029 1397931 1 T C scaffold1184 ScafM SNP 0008.scaffold00029 1397950 1 C T scaffold1184 ScafM INDEL 0008.scaffold00029 1397958 7 ....... GTCAAGT scaffold1184 Both SNP 0008.scaffold00029 1397986 1 T C scaffold1184 Both SNP 0008.scaffold00029 1398040 1 A C scaffold1184 ReadM SNP 0008.scaffold00029 1398089 1 T G - ReadM SNP 0008.scaffold00029 1398113 1 C G - ScafM SNP 0008.scaffold00029 1402143 1 G A scaffold3183 ScafM SNP 0008.scaffold00029 1402215 1 A T scaffold3183 ScafM SNP 0008.scaffold00029 1402219 1 T C scaffold3183 ScafM SNP 0008.scaffold00029 1402221 1 T G scaffold3183 ScafM SNP 0008.scaffold00029 1402242 1 C A scaffold3183 ReadM SNP 0008.scaffold00029 1403158 1 A G - ReadM SNP 0008.scaffold00029 1403169 1 A C - ReadM SNP 0008.scaffold00029 1403223 1 A T - Both SNP 0008.scaffold00029 1403586 1 G A scaffold618 Both SNP 0008.scaffold00029 1403917 1 C T scaffold618 Both SNP 0008.scaffold00029 1403953 1 A G scaffold618 Both SNP 0008.scaffold00029 1404139 1 C G scaffold618 Both SNP 0008.scaffold00029 1404197 1 T G scaffold618 Both SNP 0008.scaffold00029 1404220 1 C T scaffold618 Both SNP 0008.scaffold00029 1404297 1 T C scaffold618 Both SNP 0008.scaffold00029 1404336 1 A G scaffold618 Both SNP 0008.scaffold00029 1404390 1 G A scaffold618 Both SNP 0008.scaffold00029 1404483 1 A G scaffold618 Both SNP 0008.scaffold00029 1404702 1 G C scaffold618 Both SNP 0008.scaffold00029 1404856 1 G T scaffold618 Both INDEL 0008.scaffold00029 1404904 1 . A scaffold618 ScafM SNP 0008.scaffold00029 1404954 2 GA TC scaffold618 Both SNP 0008.scaffold00029 1404992 1 A T scaffold618 ScafM SNP 0008.scaffold00029 1405028 2 CG TA scaffold618 ScafM INDEL 0008.scaffold00029 1405147 1 . G scaffold618 ScafM SNP 0008.scaffold00029 1405232 1 A C scaffold618 ScafM SNP 0008.scaffold00029 1405238 1 T C scaffold618 ScafM SNP 0008.scaffold00029 1405247 1 C G scaffold618 ScafM SNP 0008.scaffold00029 1405286 1 C A scaffold618 ScafM SNP 0008.scaffold00029 1405349 1 C T scaffold618 ReadM SNP 0008.scaffold00029 1405552 1 G A - Both SNP 0008.scaffold00029 1405636 1 T C scaffold618 Both SNP 0008.scaffold00029 1405731 1 T C scaffold618 Both SNP 0008.scaffold00029 1405772 1 T G scaffold618 ReadM INDEL 0008.scaffold00029 1405776 1 A . - ScafM INDEL 0008.scaffold00029 1405776 2 AA .G scaffold618 ScafM SNP 0008.scaffold00029 1405868 1 T C scaffold618 ScafM INDEL 0008.scaffold00029 1406057 4 .... TGTA scaffold618 ReadM SNP 0008.scaffold00029 1406422 1 A C - ReadM SNP 0008.scaffold00029 1406493 1 C T - ReadM SNP 0008.scaffold00029 1406506 1 C T - ReadM SNP 0008.scaffold00029 1406791 1 G T - ReadM SNP 0008.scaffold00029 1406795 1 C G - ReadM SNP 0008.scaffold00029 1406910 1 T C - ReadM SNP 0008.scaffold00029 1406968 1 T C - ReadM SNP 0008.scaffold00029 1407042 1 G A - ReadM SNP 0008.scaffold00029 1407151 1 T C - ReadM SNP 0008.scaffold00029 1407210 1 C A - ReadM SNP 0008.scaffold00029 1407283 1 G A - ReadM SNP 0008.scaffold00029 1407354 1 G A - ReadM INDEL 0008.scaffold00029 1407495 1 G . - ReadM SNP 0008.scaffold00029 1407596 1 T C - ReadM SNP 0008.scaffold00029 1407697 1 G C - ReadM SNP 0008.scaffold00029 1407789 1 T G - ReadM SNP 0008.scaffold00029 1407870 1 G A - ReadM SNP 0008.scaffold00029 1407891 1 T C - ReadM SNP 0008.scaffold00029 1408351 1 T G - ReadM SNP 0008.scaffold00029 1408365 1 A C - ReadM SNP 0008.scaffold00029 1408381 1 T C - ReadM SNP 0008.scaffold00029 1408427 1 T G - ReadM SNP 0008.scaffold00029 1408729 1 A G - ReadM SNP 0008.scaffold00029 1408733 1 C G - ReadM SNP 0008.scaffold00029 1409042 1 G A - ReadM SNP 0008.scaffold00029 1409137 1 C T - ReadM SNP 0008.scaffold00029 1409320 1 T C - ReadM SNP 0008.scaffold00029 1409345 1 T C - ReadM SNP 0008.scaffold00029 1409415 1 T C - ReadM SNP 0008.scaffold00029 1409510 1 A C - ReadM SNP 0008.scaffold00029 1409516 1 G A - ReadM SNP 0008.scaffold00029 1409609 1 T C - ReadM SNP 0008.scaffold00029 1409650 1 G A - ReadM SNP 0008.scaffold00029 1409654 1 T C - ReadM SNP 0008.scaffold00029 1409677 1 A G - ReadM SNP 0008.scaffold00029 1409684 1 T C - ReadM SNP 0008.scaffold00029 1409935 1 C T - ReadM SNP 0008.scaffold00029 1409988 1 C T - ReadM SNP 0008.scaffold00029 1410121 1 C T - ReadM SNP 0008.scaffold00029 1410147 1 G A - ReadM SNP 0008.scaffold00029 1410340 1 A T - ReadM SNP 0008.scaffold00029 1410418 1 A G - Both SNP 0008.scaffold00029 1410475 1 C T scaffold618 ReadM SNP 0008.scaffold00029 1410547 1 A T - ReadM SNP 0008.scaffold00029 1410686 1 A G - Both SNP 0008.scaffold00029 1410763 1 A G scaffold618 ReadM SNP 0008.scaffold00029 1410817 1 T C - ReadM SNP 0008.scaffold00029 1410827 1 C T - ReadM SNP 0008.scaffold00029 1410897 1 C T - ReadM SNP 0008.scaffold00029 1411056 1 T C - ReadM SNP 0008.scaffold00029 1411067 1 G A - ReadM SNP 0008.scaffold00029 1411183 1 G A - ReadM SNP 0008.scaffold00029 1411231 1 G A - ReadM SNP 0008.scaffold00029 1411250 1 G C - ReadM SNP 0008.scaffold00029 1411252 1 A C - ReadM SNP 0008.scaffold00029 1411271 1 G A - ReadM SNP 0008.scaffold00029 1411380 1 C T - ReadM SNP 0008.scaffold00029 1411383 1 G A - ReadM SNP 0008.scaffold00029 1411392 1 T C - ReadM SNP 0008.scaffold00029 1411500 1 A G - ReadM SNP 0008.scaffold00029 1411537 1 G A - ReadM SNP 0008.scaffold00029 1411660 1 T C - ReadM SNP 0008.scaffold00029 1411696 1 G T - ReadM SNP 0008.scaffold00029 1411762 1 T C - ReadM SNP 0008.scaffold00029 1411808 1 A G - ReadM SNP 0008.scaffold00029 1411845 1 A C - ReadM SNP 0008.scaffold00029 1411852 1 T A - ReadM SNP 0008.scaffold00029 1411921 1 A C - ReadM SNP 0008.scaffold00029 1411930 1 G A - Both SNP 0008.scaffold00029 1412099 1 A G scaffold618 ReadM SNP 0008.scaffold00029 1412206 1 G T - Both SNP 0008.scaffold00029 1412337 1 A G scaffold618 Both SNP 0008.scaffold00029 1412445 1 T C scaffold618 ReadM SNP 0008.scaffold00029 1412460 1 G A - ReadM SNP 0008.scaffold00029 1412575 1 T G - ReadM SNP 0008.scaffold00029 1412709 1 C A - ReadM SNP 0008.scaffold00029 1412723 1 T C - ReadM SNP 0008.scaffold00029 1412726 1 A T - ReadM SNP 0008.scaffold00029 1412852 1 T G - ReadM SNP 0008.scaffold00029 1412878 1 T C - ReadM SNP 0008.scaffold00029 1412924 1 A G - ReadM SNP 0008.scaffold00029 1413101 1 G A - ReadM SNP 0008.scaffold00029 1413187 1 C G - ReadM SNP 0008.scaffold00029 1413196 1 A G - ReadM SNP 0008.scaffold00029 1413269 1 T C - ReadM INDEL 0008.scaffold00029 1413270 1 . 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TAATTTCAAACT scaffold4908 ScafM INDEL 0009.scaffold00036 427430 9 ......... 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ATTGC scaffold33894 ScafM SNP 0009.scaffold00036 447656 1 A G scaffold33894 ScafM SNP 0009.scaffold00036 447721 1 A G scaffold33894 ScafM SNP 0009.scaffold00036 450573 1 T G scaffold33894 ScafM SNP 0009.scaffold00036 450606 1 C A scaffold33894 ScafM INDEL 0009.scaffold00036 450699 2 .. 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AGTA scaffold3002 Both SNP 0009.scaffold00036 490026 1 T C scaffold3002 ScafM SNP 0009.scaffold00036 490057 2 TT CC scaffold3002 Both SNP 0009.scaffold00036 490106 1 G A scaffold3002 ReadM SNP 0009.scaffold00036 490192 1 A G - ReadM SNP 0009.scaffold00036 490210 1 T C - Both INDEL 0009.scaffold00036 490259 1 . 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ATCT scaffold3002 ScafM INDEL 0009.scaffold00036 491075 4 .... CGTA scaffold3002 ScafM SNP 0009.scaffold00036 491081 1 C T scaffold3002 ScafM SNP 0009.scaffold00036 491095 2 AC CT scaffold3002 ScafM SNP 0009.scaffold00036 491142 1 G T scaffold3002 ScafM SNP 0009.scaffold00036 491148 1 A G scaffold3002 ScafM SNP 0009.scaffold00036 491174 1 T C scaffold3002 ScafM INDEL 0009.scaffold00036 491309 8 ........ 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TCAAAAT scaffold17123 ScafM SNP 0009.scaffold00036 581694 1 T G scaffold17123 ScafM SNP 0009.scaffold00036 581696 2 AT CC scaffold17123 ScafM SNP 0009.scaffold00036 581701 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 581706 1 C T scaffold17123 ScafM SNP 0009.scaffold00036 581709 1 G T scaffold17123 ScafM SNP 0009.scaffold00036 581716 2 GC AT scaffold17123 ScafM SNP 0009.scaffold00036 581724 1 G T scaffold17123 ScafM INDEL 0009.scaffold00036 581728 5 ..... TGCTG scaffold17123 ScafM INDEL 0009.scaffold00036 581742 2 AT .. scaffold17123 ScafM SNP 0009.scaffold00036 581751 1 C A scaffold17123 ScafM SNP 0009.scaffold00036 581753 1 A C scaffold17123 ScafM SNP 0009.scaffold00036 581769 1 T A scaffold17123 ScafM SNP 0009.scaffold00036 581790 1 T C scaffold17123 ScafM SNP 0009.scaffold00036 581795 2 CT TG scaffold17123 ScafM SNP 0009.scaffold00036 581812 1 C A scaffold17123 ScafM SNP 0009.scaffold00036 581825 2 TC CT scaffold17123 ScafM SNP 0009.scaffold00036 581832 1 C T scaffold17123 ScafM SNP 0009.scaffold00036 581844 1 A T scaffold17123 ScafM INDEL 0009.scaffold00036 581849 7 ....... ACCAATT scaffold17123 ScafM INDEL 0009.scaffold00036 581850 5 ..... ATCCT scaffold17123 ScafM INDEL 0009.scaffold00036 581854 6 ...... CATTGA scaffold17123 ScafM SNP 0009.scaffold00036 581859 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 581895 1 C T scaffold17123 ScafM SNP 0009.scaffold00036 581901 1 C T scaffold17123 ScafM SNP 0009.scaffold00036 581903 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 581911 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 581933 1 C T scaffold17123 ScafM SNP 0009.scaffold00036 581937 1 C G scaffold17123 ScafM SNP 0009.scaffold00036 581942 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 581944 1 T G scaffold17123 ScafM INDEL 0009.scaffold00036 581956 2 TT .. scaffold17123 ScafM SNP 0009.scaffold00036 581962 1 T C scaffold17123 ScafM SNP 0009.scaffold00036 581966 1 T C scaffold17123 ScafM INDEL 0009.scaffold00036 581969 3 ... ATC scaffold17123 ScafM SNP 0009.scaffold00036 581977 1 A G scaffold17123 ScafM SNP 0009.scaffold00036 581998 1 G A scaffold17123 ScafM SNP 0009.scaffold00036 582000 1 A T scaffold17123 ScafM SNP 0009.scaffold00036 582007 1 A G scaffold17123 ScafM INDEL 0009.scaffold00036 582031 1 G . scaffold17123 ScafM SNP 0009.scaffold00036 582038 2 CT TG scaffold17123 ScafM INDEL 0009.scaffold00036 582602 1 . T scaffold5270 ScafM INDEL 0009.scaffold00036 582603 1 . 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C scaffold5270 ScafM SNP 0009.scaffold00036 582998 2 AC TA scaffold5270 ScafM SNP 0009.scaffold00036 583022 1 T C scaffold5270 ScafM SNP 0009.scaffold00036 583024 1 G A scaffold5270 ScafM INDEL 0009.scaffold00036 583066 1 . T scaffold5270 ScafM SNP 0009.scaffold00036 583086 1 C A scaffold5270 ScafM SNP 0009.scaffold00036 583104 1 G A scaffold5270 ScafM INDEL 0009.scaffold00036 583112 2 CA .. scaffold5270 ScafM SNP 0009.scaffold00036 583115 1 A C scaffold5270 ScafM SNP 0009.scaffold00036 583117 1 A C scaffold5270 ScafM SNP 0009.scaffold00036 583119 1 A C scaffold5270 ScafM SNP 0009.scaffold00036 583132 1 G A scaffold5270 ScafM SNP 0009.scaffold00036 583140 1 G A scaffold5270 ScafM SNP 0009.scaffold00036 583142 1 G A scaffold5270 ScafM SNP 0009.scaffold00036 583154 1 G C scaffold5270 ScafM SNP 0009.scaffold00036 583158 1 G A scaffold5270 ScafM SNP 0009.scaffold00036 583162 1 C T scaffold5270 ScafM INDEL 0009.scaffold00036 583165 4 .... TAAG scaffold5270 ScafM SNP 0009.scaffold00036 583179 1 A T scaffold5270 ScafM SNP 0009.scaffold00036 583185 1 T C scaffold5270 ScafM SNP 0009.scaffold00036 583195 1 C T scaffold5270 ScafM SNP 0009.scaffold00036 583199 2 AT GC scaffold5270 ScafM SNP 0009.scaffold00036 583213 2 AC GG scaffold5270 ScafM SNP 0009.scaffold00036 583222 1 C T scaffold5270 ScafM SNP 0009.scaffold00036 583232 1 A T scaffold5270 ScafM SNP 0009.scaffold00036 583254 2 CA GG scaffold5270 ScafM SNP 0009.scaffold00036 593499 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 593522 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 593526 2 AG CT scaffold24060 ScafM SNP 0009.scaffold00036 593534 1 G C scaffold24060 ScafM SNP 0009.scaffold00036 593536 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 593540 1 T G scaffold24060 ScafM SNP 0009.scaffold00036 593549 2 TA AG scaffold24060 ScafM SNP 0009.scaffold00036 593555 1 C G scaffold24060 ScafM SNP 0009.scaffold00036 593576 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 593581 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 593586 1 A T scaffold24060 ScafM SNP 0009.scaffold00036 593592 1 G T scaffold24060 ScafM SNP 0009.scaffold00036 593598 1 T C scaffold24060 ScafM INDEL 0009.scaffold00036 593605 2 GA .. scaffold24060 ScafM INDEL 0009.scaffold00036 593608 2 CA .G scaffold24060 ScafM SNP 0009.scaffold00036 593614 2 GT AC scaffold24060 ScafM SNP 0009.scaffold00036 593620 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 593626 1 G T scaffold24060 ScafM SNP 0009.scaffold00036 593634 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 593642 1 G A scaffold24060 ScafM INDEL 0009.scaffold00036 593648 2 .. 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A scaffold24060 ScafM SNP 0009.scaffold00036 612407 1 A T scaffold24060 Both SNP 0009.scaffold00036 612423 1 G A scaffold24060 Both SNP 0009.scaffold00036 612428 1 C T scaffold24060 Both SNP 0009.scaffold00036 612458 1 G C scaffold24060 ReadM SNP 0009.scaffold00036 612609 1 C G - ReadM SNP 0009.scaffold00036 612613 1 G A - ReadM SNP 0009.scaffold00036 612632 1 A C - ReadM SNP 0009.scaffold00036 612648 1 G T - ReadM SNP 0009.scaffold00036 612666 1 G A - ReadM SNP 0009.scaffold00036 612795 1 C T - ReadM SNP 0009.scaffold00036 612844 1 C G - ReadM SNP 0009.scaffold00036 612877 1 G A - ReadM SNP 0009.scaffold00036 612909 1 T C - ReadM SNP 0009.scaffold00036 612911 1 G A - ReadM SNP 0009.scaffold00036 613050 1 G A - ReadM SNP 0009.scaffold00036 613056 1 A G - ReadM SNP 0009.scaffold00036 613195 1 T C - ReadM SNP 0009.scaffold00036 613222 1 A G - ReadM SNP 0009.scaffold00036 613243 1 C T - ReadM SNP 0009.scaffold00036 613431 1 C A - ReadM SNP 0009.scaffold00036 613468 1 A G - Both SNP 0009.scaffold00036 613532 1 A C scaffold24060 Both SNP 0009.scaffold00036 613606 1 C A scaffold24060 ScafM SNP 0009.scaffold00036 613620 1 A G scaffold24060 Both INDEL 0009.scaffold00036 613865 1 . C scaffold24060 ScafM SNP 0009.scaffold00036 614042 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 614049 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 614063 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 614186 1 A C scaffold24060 Both SNP 0009.scaffold00036 614344 1 T G scaffold24060 ReadM SNP 0009.scaffold00036 614527 1 G A - ScafM SNP 0009.scaffold00036 614628 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 614642 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 614676 1 G T scaffold24060 ScafM SNP 0009.scaffold00036 614699 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 614721 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 614736 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 614765 1 T C scaffold24060 ReadM SNP 0009.scaffold00036 614976 1 T A - ReadM SNP 0009.scaffold00036 615032 1 G C - ReadM SNP 0009.scaffold00036 615042 1 A G - ScafM SNP 0009.scaffold00036 615283 1 C G scaffold6913 ScafM SNP 0009.scaffold00036 615288 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 615291 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615315 1 G C scaffold6913 ScafM INDEL 0009.scaffold00036 615323 4 .... 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G scaffold6913 ScafM SNP 0009.scaffold00036 615452 1 G A scaffold6913 ScafM INDEL 0009.scaffold00036 615453 2 .. TC scaffold6913 ScafM INDEL 0009.scaffold00036 615454 2 .. CG scaffold6913 ScafM SNP 0009.scaffold00036 615472 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 615475 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615516 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 615528 2 CC TT scaffold6913 ScafM SNP 0009.scaffold00036 615536 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615562 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 615569 1 T C scaffold6913 ScafM INDEL 0009.scaffold00036 615577 6 ...... ATGGTT scaffold6913 ScafM SNP 0009.scaffold00036 615587 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615609 1 G C scaffold6913 ScafM SNP 0009.scaffold00036 615615 1 A T scaffold6913 ScafM INDEL 0009.scaffold00036 615632 1 . T scaffold6913 ScafM SNP 0009.scaffold00036 615634 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 615655 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 615674 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615677 1 A T scaffold6913 ScafM INDEL 0009.scaffold00036 615683 9 AAAAAAAAA ......... scaffold6913 ScafM INDEL 0009.scaffold00036 615723 5 AGTAA ..... scaffold6913 ScafM SNP 0009.scaffold00036 615737 1 C A scaffold6913 ScafM INDEL 0009.scaffold00036 615738 2 .. TA scaffold6913 ScafM INDEL 0009.scaffold00036 615739 1 . A scaffold6913 ScafM SNP 0009.scaffold00036 615746 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 615754 1 G C scaffold6913 ScafM SNP 0009.scaffold00036 615784 1 A C scaffold6913 ScafM SNP 0009.scaffold00036 615802 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 615804 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 615821 1 T A scaffold6913 ScafM SNP 0009.scaffold00036 615849 1 C G scaffold6913 ScafM SNP 0009.scaffold00036 615852 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615858 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 615896 1 A T scaffold6913 ScafM SNP 0009.scaffold00036 615904 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 615920 2 AG GC scaffold6913 ScafM SNP 0009.scaffold00036 615927 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615931 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 615933 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615937 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 615948 1 A G scaffold6913 ReadM SNP 0009.scaffold00036 615951 1 C A - ScafM SNP 0009.scaffold00036 615952 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 615999 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616014 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 616037 1 G T scaffold6913 ScafM SNP 0009.scaffold00036 616050 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616057 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616086 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 616160 1 C G scaffold6913 ScafM SNP 0009.scaffold00036 616180 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 616183 1 G T scaffold6913 ScafM SNP 0009.scaffold00036 616187 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 616210 1 C G scaffold6913 ScafM SNP 0009.scaffold00036 616225 1 G C scaffold6913 ScafM SNP 0009.scaffold00036 616228 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 616249 1 T C scaffold6913 ScafM INDEL 0009.scaffold00036 616251 1 A . scaffold6913 ScafM SNP 0009.scaffold00036 616274 1 T C scaffold6913 ScafM INDEL 0009.scaffold00036 616289 1 A . scaffold6913 ScafM INDEL 0009.scaffold00036 616296 28 GACATAGTTGCCTTTTCTGGTAAACCTG ............................ scaffold6913 ScafM INDEL 0009.scaffold00036 616327 21 TCAAATTCTATTGAATATAAT ..................... scaffold6913 ReadM SNP 0009.scaffold00036 616333 1 T C - ScafM INDEL 0009.scaffold00036 616350 1 T . scaffold6913 ScafM SNP 0009.scaffold00036 616360 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 616383 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 616387 1 C T scaffold6913 ReadM SNP 0009.scaffold00036 616394 1 G C - ScafM SNP 0009.scaffold00036 616420 1 G A scaffold6913 ScafM SNP 0009.scaffold00036 616437 1 A C scaffold6913 ScafM SNP 0009.scaffold00036 616453 1 A C scaffold6913 ScafM SNP 0009.scaffold00036 616466 1 G T scaffold6913 ScafM SNP 0009.scaffold00036 616469 1 C A scaffold6913 ScafM SNP 0009.scaffold00036 616473 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616478 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616480 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 616502 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616508 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 616578 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 616591 1 T C scaffold6913 ScafM SNP 0009.scaffold00036 616604 1 C G scaffold6913 ScafM SNP 0009.scaffold00036 616613 1 T A scaffold6913 ScafM SNP 0009.scaffold00036 616624 1 T G scaffold6913 ScafM SNP 0009.scaffold00036 616638 1 A T scaffold6913 ScafM SNP 0009.scaffold00036 616641 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 616667 1 T A scaffold6913 ScafM SNP 0009.scaffold00036 616676 1 A G scaffold6913 ScafM SNP 0009.scaffold00036 616689 1 C T scaffold6913 ScafM SNP 0009.scaffold00036 616722 1 T C scaffold6913 ScafM INDEL 0009.scaffold00036 616735 2 TA .. scaffold6913 ScafM SNP 0009.scaffold00036 616856 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 616897 1 C T scaffold24060 Both SNP 0009.scaffold00036 617079 1 T C scaffold24060 Both SNP 0009.scaffold00036 617261 1 C G scaffold24060 ScafM SNP 0009.scaffold00036 617408 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 617521 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 618027 1 G A scaffold24060 ScafM INDEL 0009.scaffold00036 618079 1 A . scaffold24060 Both SNP 0009.scaffold00036 618429 1 C A scaffold24060 Both SNP 0009.scaffold00036 618489 1 G A scaffold24060 ReadM SNP 0009.scaffold00036 618663 1 T C - ReadM SNP 0009.scaffold00036 618779 1 G T - ReadM SNP 0009.scaffold00036 618820 1 T A - ReadM SNP 0009.scaffold00036 618912 1 C G - ReadM SNP 0009.scaffold00036 619189 1 G C - ReadM SNP 0009.scaffold00036 619205 1 A G - ReadM SNP 0009.scaffold00036 619343 1 G T - Both SNP 0009.scaffold00036 619572 1 A T scaffold24060 Both SNP 0009.scaffold00036 619655 1 T G scaffold24060 ReadM SNP 0009.scaffold00036 619913 1 A G - Both SNP 0009.scaffold00036 620151 1 A C scaffold24060 Both SNP 0009.scaffold00036 620403 1 C A scaffold24060 ReadM SNP 0009.scaffold00036 620564 1 A T - Both SNP 0009.scaffold00036 620934 1 C A scaffold24060 Both SNP 0009.scaffold00036 621060 1 A G scaffold24060 Both SNP 0009.scaffold00036 621737 1 G A scaffold24060 Both SNP 0009.scaffold00036 621940 1 A G scaffold24060 Both SNP 0009.scaffold00036 621946 1 G A scaffold24060 Both SNP 0009.scaffold00036 621989 1 G A scaffold24060 Both SNP 0009.scaffold00036 622049 1 A G scaffold24060 Both SNP 0009.scaffold00036 622146 1 T C scaffold24060 Both INDEL 0009.scaffold00036 622168 1 A . scaffold24060 ScafM SNP 0009.scaffold00036 622224 1 C A scaffold24060 ScafM SNP 0009.scaffold00036 622228 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 622234 1 T A scaffold24060 Both SNP 0009.scaffold00036 622269 1 C A scaffold24060 Both SNP 0009.scaffold00036 622326 1 C G scaffold24060 Both SNP 0009.scaffold00036 622386 1 C T scaffold24060 Both SNP 0009.scaffold00036 622452 1 G A scaffold24060 Both SNP 0009.scaffold00036 622491 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 622555 1 C A scaffold24060 ReadM SNP 0009.scaffold00036 622742 1 G A - ReadM SNP 0009.scaffold00036 622751 1 C T - ReadM SNP 0009.scaffold00036 622759 1 C T - ReadM SNP 0009.scaffold00036 622828 1 T C - Both SNP 0009.scaffold00036 622979 1 G A scaffold24060 Both SNP 0009.scaffold00036 623036 1 G A scaffold24060 Both SNP 0009.scaffold00036 623093 1 T C scaffold24060 ReadM INDEL 0009.scaffold00036 623123 1 T . - ScafM INDEL 0009.scaffold00036 623123 2 TT .A scaffold24060 Both SNP 0009.scaffold00036 623158 1 C T scaffold24060 ScafM INDEL 0009.scaffold00036 623268 5 GGCTT ..... scaffold24060 ScafM SNP 0009.scaffold00036 623275 2 TC AG scaffold24060 ScafM SNP 0009.scaffold00036 623291 1 A C scaffold24060 ScafM INDEL 0009.scaffold00036 623342 13 ............. AGTATATATTAAG scaffold24060 ScafM INDEL 0009.scaffold00036 623376 2 .. AA scaffold24060 Both SNP 0009.scaffold00036 623394 1 A G scaffold24060 Both SNP 0009.scaffold00036 623640 1 C T scaffold24060 Both SNP 0009.scaffold00036 623660 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 623799 1 C T scaffold24060 Both SNP 0009.scaffold00036 623908 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 624041 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 624048 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 624057 1 C T scaffold24060 ScafM INDEL 0009.scaffold00036 624059 1 . C scaffold24060 ScafM SNP 0009.scaffold00036 624075 1 G C scaffold24060 ScafM INDEL 0009.scaffold00036 624087 1 . T scaffold24060 ScafM SNP 0009.scaffold00036 624119 1 T C scaffold24060 ScafM INDEL 0009.scaffold00036 624168 2 GC .T scaffold24060 ScafM INDEL 0009.scaffold00036 624212 1 T . scaffold24060 ScafM SNP 0009.scaffold00036 624260 1 C G scaffold24060 ScafM SNP 0009.scaffold00036 624269 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 624587 1 C G scaffold24060 ScafM SNP 0009.scaffold00036 624663 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 624683 1 C T scaffold24060 ScafM INDEL 0009.scaffold00036 624697 7 AAAGTAG ....... scaffold24060 ScafM INDEL 0009.scaffold00036 624739 8 ........ AACTAGCA scaffold24060 ScafM SNP 0009.scaffold00036 624764 1 A G scaffold24060 ScafM INDEL 0009.scaffold00036 624779 7 TACCAAC ....... scaffold24060 Both SNP 0009.scaffold00036 625349 1 G A scaffold24060 Both SNP 0009.scaffold00036 625356 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 625422 1 C G scaffold24060 ReadM INDEL 0009.scaffold00036 625700 1 . T - ReadM SNP 0009.scaffold00036 625879 1 G A - ReadM SNP 0009.scaffold00036 625893 1 C G - ScafM INDEL 0009.scaffold00036 626209 7 ATTTAAT ....... scaffold24060 ScafM SNP 0009.scaffold00036 626231 1 G T scaffold24060 ScafM SNP 0009.scaffold00036 626246 1 A G scaffold24060 ScafM INDEL 0009.scaffold00036 626298 8 ........ ACTCAATA scaffold24060 ScafM SNP 0009.scaffold00036 626313 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 626377 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 626395 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 626423 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 626442 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 626463 1 T C scaffold24060 ScafM INDEL 0009.scaffold00036 626473 1 . A scaffold24060 ScafM SNP 0009.scaffold00036 627642 2 AT GG scaffold24060 ScafM SNP 0009.scaffold00036 627665 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 627840 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 627864 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 627878 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 628220 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 628331 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 628342 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 628361 1 C T scaffold24060 ScafM SNP 0009.scaffold00036 628372 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 628387 2 CA AG scaffold24060 ScafM SNP 0009.scaffold00036 628419 1 G A scaffold24060 ScafM INDEL 0009.scaffold00036 629262 1 G . scaffold24060 ScafM INDEL 0009.scaffold00036 629273 3 ATG ... scaffold24060 ScafM SNP 0009.scaffold00036 629277 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 629326 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 629328 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 629353 2 GT AC scaffold24060 ScafM SNP 0009.scaffold00036 629366 1 T C scaffold24060 ScafM SNP 0009.scaffold00036 629374 1 T A scaffold24060 ScafM SNP 0009.scaffold00036 629396 1 C A scaffold24060 ScafM SNP 0009.scaffold00036 629415 1 T A scaffold24060 ScafM INDEL 0009.scaffold00036 629437 4 .... AAAA scaffold24060 ScafM SNP 0009.scaffold00036 629481 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 629587 1 G C scaffold24060 ScafM SNP 0009.scaffold00036 629600 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 629608 1 G A scaffold24060 ScafM INDEL 0009.scaffold00036 629631 2 TT .. scaffold24060 ScafM SNP 0009.scaffold00036 629634 3 TTC CCA scaffold24060 ScafM SNP 0009.scaffold00036 629642 2 TC CA scaffold24060 ScafM SNP 0009.scaffold00036 629657 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 629689 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 629703 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 629763 1 T C scaffold24060 Both SNP 0009.scaffold00036 629773 1 T A scaffold24060 ReadM INDEL 0009.scaffold00036 629932 1 A . - ScafM INDEL 0009.scaffold00036 630104 1 T . scaffold24060 ScafM SNP 0009.scaffold00036 630115 1 G T scaffold24060 ScafM INDEL 0009.scaffold00036 630153 1 T . scaffold24060 ScafM SNP 0009.scaffold00036 630168 1 C A scaffold24060 ScafM INDEL 0009.scaffold00036 630186 2 .. AC scaffold24060 ScafM INDEL 0009.scaffold00036 630206 1 C . scaffold24060 ScafM INDEL 0009.scaffold00036 630227 10 CTAGCAGCCC .......... scaffold24060 Both SNP 0009.scaffold00036 630309 1 G T scaffold24060 Both SNP 0009.scaffold00036 630316 1 A G scaffold24060 Both SNP 0009.scaffold00036 630591 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 630632 1 A G scaffold24060 Both SNP 0009.scaffold00036 630635 1 C T scaffold24060 Both SNP 0009.scaffold00036 630707 1 T G scaffold24060 Both SNP 0009.scaffold00036 630738 1 A G scaffold24060 ScafM SNP 0009.scaffold00036 630740 1 C T scaffold24060 ReadM SNP 0009.scaffold00036 630851 1 A G - ReadM SNP 0009.scaffold00036 631053 1 A T - ReadM SNP 0009.scaffold00036 631106 1 A T - ReadM SNP 0009.scaffold00036 632164 1 G T - ScafM INDEL 0009.scaffold00036 632164 1 G . scaffold24060 ScafM SNP 0009.scaffold00036 632395 1 C T scaffold24060 Both SNP 0009.scaffold00036 632470 1 G A scaffold24060 Both SNP 0009.scaffold00036 632696 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 632715 2 CT TC scaffold24060 Both SNP 0009.scaffold00036 632791 1 T C scaffold24060 Both SNP 0009.scaffold00036 632965 1 A T scaffold24060 Both SNP 0009.scaffold00036 633291 1 A T scaffold24060 Both SNP 0009.scaffold00036 633597 1 T C scaffold24060 Both SNP 0009.scaffold00036 633810 1 T A scaffold24060 Both SNP 0009.scaffold00036 633848 1 T C scaffold24060 Both SNP 0009.scaffold00036 633915 1 A C scaffold24060 Both SNP 0009.scaffold00036 634139 1 T C scaffold24060 Both SNP 0009.scaffold00036 634249 1 T A scaffold24060 Both SNP 0009.scaffold00036 634315 1 A C scaffold24060 ScafM SNP 0009.scaffold00036 634326 1 A T scaffold24060 Both SNP 0009.scaffold00036 634465 1 A C scaffold24060 Both SNP 0009.scaffold00036 634668 1 G C scaffold24060 Both SNP 0009.scaffold00036 634727 1 A G scaffold24060 Both INDEL 0009.scaffold00036 634839 1 A . scaffold24060 Both SNP 0009.scaffold00036 634873 1 T C scaffold24060 Both SNP 0009.scaffold00036 634986 1 G A scaffold24060 ScafM SNP 0009.scaffold00036 634996 1 A C scaffold24060 ScafM SNP 0009.scaffold00036 635081 1 G C scaffold24060 ScafM INDEL 0009.scaffold00036 635192 1 . 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T scaffold4853 ScafM INDEL 0009.scaffold00036 693839 1 G . scaffold4853 ScafM SNP 0009.scaffold00036 693857 1 G T scaffold4853 ScafM SNP 0009.scaffold00036 693867 1 A G scaffold4853 ScafM SNP 0009.scaffold00036 694250 1 T C scaffold1969 ScafM SNP 0009.scaffold00036 694306 1 A C scaffold1969 ScafM SNP 0009.scaffold00036 694308 1 T A scaffold1969 ScafM SNP 0009.scaffold00036 694311 1 C A scaffold1969 ScafM SNP 0009.scaffold00036 694313 2 CC TG scaffold1969 ScafM SNP 0009.scaffold00036 694324 1 C A scaffold1969 ScafM SNP 0009.scaffold00036 694361 2 AG GC scaffold1969 ScafM SNP 0009.scaffold00036 694416 1 A G scaffold6146 ScafM SNP 0009.scaffold00036 694486 1 A G scaffold6146 ScafM SNP 0009.scaffold00036 694490 1 T C scaffold6146 ScafM SNP 0009.scaffold00036 694648 1 C T scaffold7020 ScafM INDEL 0009.scaffold00036 694661 3 TTC ... scaffold7020 ScafM SNP 0009.scaffold00036 694707 2 AC GA scaffold7020 ScafM INDEL 0009.scaffold00036 694749 1 T . scaffold7020 ScafM SNP 0009.scaffold00036 694763 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 694776 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 694783 1 C A scaffold7020 ScafM SNP 0009.scaffold00036 694788 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695014 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 695021 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695036 1 G A scaffold7020 Both SNP 0009.scaffold00036 695098 1 T C scaffold7020 Both SNP 0009.scaffold00036 695197 1 C T scaffold7020 Both SNP 0009.scaffold00036 695281 1 A C scaffold7020 Both SNP 0009.scaffold00036 695319 1 C T scaffold7020 Both SNP 0009.scaffold00036 695331 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 695348 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695361 1 G A scaffold7020 Both SNP 0009.scaffold00036 695397 1 G A scaffold7020 Both INDEL 0009.scaffold00036 695410 1 G . scaffold7020 Both SNP 0009.scaffold00036 695459 1 A G scaffold7020 Both SNP 0009.scaffold00036 695513 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695539 1 G A scaffold7020 ScafM INDEL 0009.scaffold00036 695544 1 . T scaffold7020 ScafM SNP 0009.scaffold00036 695554 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 695569 1 G T scaffold7020 ScafM SNP 0009.scaffold00036 695578 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 695593 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695617 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 695619 1 A G scaffold7020 ScafM INDEL 0009.scaffold00036 695696 8 CATAATTC ........ scaffold7020 ScafM SNP 0009.scaffold00036 695715 1 T G scaffold7020 Both SNP 0009.scaffold00036 695726 1 A T scaffold7020 Both SNP 0009.scaffold00036 695821 1 G C scaffold7020 Both SNP 0009.scaffold00036 695834 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 695850 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 695869 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 695906 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 695909 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 695921 1 C G scaffold7020 ScafM SNP 0009.scaffold00036 695952 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 695956 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 695964 1 T G scaffold7020 ScafM INDEL 0009.scaffold00036 696002 2 .. AG scaffold7020 ScafM SNP 0009.scaffold00036 696006 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 696014 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 696027 1 T C scaffold7020 ScafM INDEL 0009.scaffold00036 696034 4 .... TTTT scaffold7020 ScafM SNP 0009.scaffold00036 696064 1 G A scaffold7020 ScafM INDEL 0009.scaffold00036 696104 2 .. AT scaffold7020 ScafM SNP 0009.scaffold00036 696107 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 696126 1 A C scaffold7020 ScafM INDEL 0009.scaffold00036 696146 4 TACT ...G scaffold7020 ScafM SNP 0009.scaffold00036 696280 2 AG TC scaffold7020 ScafM SNP 0009.scaffold00036 696283 1 C A scaffold7020 ScafM INDEL 0009.scaffold00036 696311 1 C . scaffold7020 ScafM SNP 0009.scaffold00036 696315 1 G T scaffold7020 ScafM SNP 0009.scaffold00036 696335 1 A G scaffold7020 Both SNP 0009.scaffold00036 696365 1 A C scaffold7020 Both SNP 0009.scaffold00036 696381 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 696447 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 696449 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 696471 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 696530 1 C T scaffold7020 ScafM INDEL 0009.scaffold00036 696542 4 GTGA .... scaffold7020 ScafM INDEL 0009.scaffold00036 696554 1 A . scaffold7020 ScafM SNP 0009.scaffold00036 696605 1 G A scaffold7020 ScafM INDEL 0009.scaffold00036 696617 1 A . scaffold7020 ScafM SNP 0009.scaffold00036 696627 1 A T scaffold7020 ScafM INDEL 0009.scaffold00036 696632 1 C . scaffold7020 ScafM SNP 0009.scaffold00036 696644 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 696663 1 G A scaffold7020 ScafM INDEL 0009.scaffold00036 696736 4 ATGT .... scaffold7020 ScafM SNP 0009.scaffold00036 696758 1 G T scaffold7020 ScafM SNP 0009.scaffold00036 696765 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 696778 1 C T scaffold7020 Both SNP 0009.scaffold00036 696791 1 A G scaffold7020 Both INDEL 0009.scaffold00036 696835 1 . T scaffold7020 ScafM SNP 0009.scaffold00036 696933 1 G A scaffold7020 ScafM INDEL 0009.scaffold00036 696942 5 GGGAA ..... scaffold7020 ScafM SNP 0009.scaffold00036 696952 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 696965 1 T C scaffold7020 ScafM INDEL 0009.scaffold00036 696966 1 . A scaffold7020 Both SNP 0009.scaffold00036 697009 1 T G scaffold7020 Both SNP 0009.scaffold00036 697020 1 C T scaffold7020 Both SNP 0009.scaffold00036 697054 1 C G scaffold7020 Both SNP 0009.scaffold00036 697117 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 697137 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 697142 1 T C scaffold7020 ScafM INDEL 0009.scaffold00036 697154 8 TCGCCGCC ........ scaffold7020 ScafM INDEL 0009.scaffold00036 697203 1 . T scaffold7020 ScafM INDEL 0009.scaffold00036 697240 2 .. TC scaffold7020 ScafM SNP 0009.scaffold00036 697242 1 A T scaffold7020 ScafM INDEL 0009.scaffold00036 697244 2 .. TT scaffold7020 ScafM SNP 0009.scaffold00036 697251 1 T G scaffold7020 Both SNP 0009.scaffold00036 697315 1 T C scaffold7020 Both SNP 0009.scaffold00036 697319 1 C T scaffold7020 Both SNP 0009.scaffold00036 697494 1 T A scaffold7020 Both SNP 0009.scaffold00036 697517 1 G A scaffold7020 Both SNP 0009.scaffold00036 697532 1 A T scaffold7020 Both SNP 0009.scaffold00036 697548 1 T C scaffold7020 Both INDEL 0009.scaffold00036 697731 1 A . scaffold7020 Both SNP 0009.scaffold00036 697851 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 697885 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 697891 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 697901 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 697911 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 697925 1 C T scaffold7020 ScafM INDEL 0009.scaffold00036 697952 3 ... GCT scaffold7020 ScafM SNP 0009.scaffold00036 697957 1 C T scaffold7020 Both SNP 0009.scaffold00036 697988 1 T C scaffold7020 Both SNP 0009.scaffold00036 698024 1 T C scaffold7020 Both SNP 0009.scaffold00036 698083 1 C A scaffold7020 Both SNP 0009.scaffold00036 698159 1 C A scaffold7020 Both SNP 0009.scaffold00036 698228 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 698255 1 C G scaffold7020 ScafM SNP 0009.scaffold00036 698273 1 A G scaffold7020 ScafM INDEL 0009.scaffold00036 698277 1 . T scaffold7020 ScafM SNP 0009.scaffold00036 698314 1 A T scaffold7020 ScafM SNP 0009.scaffold00036 698335 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 698356 1 C A scaffold7020 ScafM SNP 0009.scaffold00036 698360 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 698366 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 698374 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 698412 2 AC CT scaffold7020 ReadM SNP 0009.scaffold00036 698844 1 T A - ReadM SNP 0009.scaffold00036 698859 1 T C - ScafM SNP 0009.scaffold00036 699123 1 A G scaffold7020 ScafM INDEL 0009.scaffold00036 699163 2 AT .. scaffold7020 ScafM SNP 0009.scaffold00036 699167 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 699202 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 699214 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 699221 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 699306 1 C T scaffold7020 Both INDEL 0009.scaffold00036 699366 1 . T scaffold7020 Both SNP 0009.scaffold00036 699376 1 G C scaffold7020 ScafM SNP 0009.scaffold00036 699431 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 699455 1 C A scaffold7020 ScafM INDEL 0009.scaffold00036 699466 4 .... TGAT scaffold7020 ScafM SNP 0009.scaffold00036 699473 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 699485 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 699564 2 GT TC scaffold7020 ScafM SNP 0009.scaffold00036 699568 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 699582 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 699609 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 699619 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 699669 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 699689 1 A T scaffold7020 ScafM SNP 0009.scaffold00036 699691 1 C T scaffold7020 ScafM SNP 0009.scaffold00036 699715 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 699717 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 699722 1 C T scaffold7020 Both SNP 0009.scaffold00036 699884 1 A G scaffold7020 Both SNP 0009.scaffold00036 699896 1 A G scaffold7020 Both SNP 0009.scaffold00036 699929 1 C A scaffold7020 ScafM SNP 0009.scaffold00036 699973 1 C A scaffold7020 ScafM SNP 0009.scaffold00036 699985 2 TG GC scaffold7020 Both SNP 0009.scaffold00036 700012 1 T C scaffold7020 Both SNP 0009.scaffold00036 700056 1 T C scaffold7020 Both SNP 0009.scaffold00036 700107 1 A C scaffold7020 Both SNP 0009.scaffold00036 700182 1 G A scaffold7020 Both SNP 0009.scaffold00036 700300 1 G C scaffold7020 Both SNP 0009.scaffold00036 700351 1 T C scaffold7020 ScafM INDEL 0009.scaffold00036 700372 7 ....... TGTCATA scaffold7020 ScafM SNP 0009.scaffold00036 700405 1 A T scaffold7020 ScafM SNP 0009.scaffold00036 700445 1 T G scaffold7020 ScafM INDEL 0009.scaffold00036 700458 8 TTCTTTTA ........ scaffold7020 ScafM SNP 0009.scaffold00036 700476 2 GG CA scaffold7020 Both SNP 0009.scaffold00036 700548 1 G T scaffold7020 Both SNP 0009.scaffold00036 700556 1 T C scaffold7020 Both SNP 0009.scaffold00036 700571 1 A C scaffold7020 ScafM SNP 0009.scaffold00036 700597 1 G T scaffold7020 ScafM SNP 0009.scaffold00036 700617 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 700633 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 700643 1 C G scaffold7020 ScafM INDEL 0009.scaffold00036 700674 1 T . scaffold7020 ScafM SNP 0009.scaffold00036 700676 1 C G scaffold7020 ScafM INDEL 0009.scaffold00036 700698 1 A . scaffold7020 ScafM SNP 0009.scaffold00036 700702 1 T A scaffold7020 ScafM SNP 0009.scaffold00036 700722 1 T C scaffold7020 ScafM INDEL 0009.scaffold00036 700727 2 .. TT scaffold7020 Both SNP 0009.scaffold00036 700784 1 G C scaffold7020 ScafM INDEL 0009.scaffold00036 700831 1 T . scaffold7020 ScafM SNP 0009.scaffold00036 700833 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 700854 1 G T scaffold7020 ScafM INDEL 0009.scaffold00036 700860 4 .... TGTC scaffold7020 ScafM SNP 0009.scaffold00036 700907 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 700938 1 C T scaffold7020 Both SNP 0009.scaffold00036 700946 1 T G scaffold7020 Both SNP 0009.scaffold00036 701006 1 T C scaffold7020 Both SNP 0009.scaffold00036 701039 1 T C scaffold7020 Both SNP 0009.scaffold00036 701121 1 T G scaffold7020 ScafM SNP 0009.scaffold00036 701181 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 701225 1 G C scaffold7020 ScafM SNP 0009.scaffold00036 701232 1 G A scaffold7020 ScafM SNP 0009.scaffold00036 701255 1 A T scaffold7020 ScafM SNP 0009.scaffold00036 701296 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 701305 1 A G scaffold7020 ScafM SNP 0009.scaffold00036 701335 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 701426 1 C A scaffold7020 ScafM SNP 0009.scaffold00036 701436 1 T C scaffold7020 ScafM SNP 0009.scaffold00036 701604 3 TTT CGA scaffold16297 ScafM SNP 0009.scaffold00036 701633 1 G A scaffold16297 ScafM SNP 0009.scaffold00036 701642 1 G T scaffold16297 ScafM SNP 0009.scaffold00036 701715 1 A G scaffold16297 ScafM SNP 0009.scaffold00036 701723 1 G C scaffold16297 ScafM INDEL 0009.scaffold00036 701752 4 .... TTTT scaffold16297 ScafM INDEL 0009.scaffold00036 701765 2 CG .. scaffold16297 ScafM INDEL 0009.scaffold00036 701774 2 GT .A scaffold16297 ScafM SNP 0009.scaffold00036 701777 1 C T scaffold16297 ScafM SNP 0009.scaffold00036 701779 1 A T scaffold16297 ScafM SNP 0009.scaffold00036 701781 2 AC TG scaffold16297 ScafM SNP 0009.scaffold00036 701787 2 AA CC scaffold16297 ScafM SNP 0010.scaffold00043 174 1 A G scaffold5047 ScafM INDEL 0010.scaffold00043 208 16 CGAAGTTGATATGGGC ................ scaffold5047 ScafM INDEL 0010.scaffold00043 325 4 .... CGAT scaffold5047 ScafM INDEL 0010.scaffold00043 352 6 GCAGCT ...... scaffold5047 ScafM INDEL 0010.scaffold00043 359 3 TGG ... scaffold5047 ScafM SNP 0010.scaffold00043 379 1 G A scaffold5047 ScafM SNP 0010.scaffold00043 391 1 T C scaffold5047 Both SNP 0010.scaffold00043 412 1 T C scaffold5047 ScafM SNP 0010.scaffold00043 417 1 G A scaffold5047 ScafM SNP 0010.scaffold00043 439 1 C T scaffold5047 ScafM SNP 0010.scaffold00043 480 1 T A scaffold5047 ScafM INDEL 0010.scaffold00043 507 6 AGTAAA ...... scaffold5047 ScafM INDEL 0010.scaffold00043 528 35 AGTTTGAGCTTTATATTGAGACTTGAAAAAATGTG ................................... scaffold5047 Both SNP 0010.scaffold00043 602 1 G A scaffold5047 ScafM SNP 0010.scaffold00043 665 1 A C scaffold5047 Both SNP 0010.scaffold00043 697 1 G A scaffold5047 ScafM SNP 0010.scaffold00043 1139 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 1153 1 C G scaffold5962 ScafM INDEL 0010.scaffold00043 1185 7 TCATAAG ....... scaffold5962 ScafM SNP 0010.scaffold00043 1217 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 1602 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 1615 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 1635 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 1637 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 1643 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 1667 1 G C scaffold5962 ScafM SNP 0010.scaffold00043 1698 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 1766 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 1771 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 1779 2 TA CG scaffold5962 ScafM SNP 0010.scaffold00043 1793 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 1804 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 1840 1 G T scaffold5962 ScafM SNP 0010.scaffold00043 1843 1 G T scaffold5962 ScafM INDEL 0010.scaffold00043 1855 2 TT .. scaffold5962 ScafM INDEL 0010.scaffold00043 1869 13 AAATGCAACGGGT ............. scaffold5962 ScafM SNP 0010.scaffold00043 1888 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 1928 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 1934 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 1936 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 1961 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 1969 2 CA TC scaffold5962 ScafM SNP 0010.scaffold00043 1988 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 1996 1 C . scaffold5962 ScafM SNP 0010.scaffold00043 2036 1 T A scaffold5962 ScafM SNP 0010.scaffold00043 2042 1 G C scaffold5962 Both SNP 0010.scaffold00043 2071 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 2121 2 AG CA scaffold5962 ScafM INDEL 0010.scaffold00043 2168 2 TT .. scaffold5962 ScafM INDEL 0010.scaffold00043 2171 2 AC .. scaffold5962 ScafM SNP 0010.scaffold00043 2174 1 T A scaffold5962 ScafM INDEL 0010.scaffold00043 2176 1 C . scaffold5962 ScafM INDEL 0010.scaffold00043 2178 1 C . scaffold5962 ScafM SNP 0010.scaffold00043 2214 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 2217 1 A G scaffold5962 ScafM INDEL 0010.scaffold00043 2244 8 TGGTTTTC ........ scaffold5962 ScafM SNP 0010.scaffold00043 2255 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 2268 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 2288 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 2297 2 AC GT scaffold5962 ScafM SNP 0010.scaffold00043 2307 1 C T scaffold5962 Both SNP 0010.scaffold00043 2362 1 T G scaffold5962 Both SNP 0010.scaffold00043 2392 1 A G scaffold5962 Both SNP 0010.scaffold00043 2412 1 T G scaffold5962 Both SNP 0010.scaffold00043 2470 1 A G scaffold5962 Both SNP 0010.scaffold00043 2998 1 G C scaffold5962 ScafM SNP 0010.scaffold00043 3338 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 3629 1 T A scaffold5962 ScafM INDEL 0010.scaffold00043 3634 2 CA .G scaffold5962 ScafM SNP 0010.scaffold00043 3639 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 3666 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 3694 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 3696 1 C A scaffold5962 ScafM INDEL 0010.scaffold00043 3707 1 . C scaffold5962 ScafM SNP 0010.scaffold00043 3714 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 3719 1 G A scaffold5962 ScafM INDEL 0010.scaffold00043 3724 8 TCATAACT ........ scaffold5962 ScafM SNP 0010.scaffold00043 3784 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 3800 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 3802 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 3817 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 3849 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 3875 7 ....... AAATAGT scaffold5962 ScafM SNP 0010.scaffold00043 3877 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 3891 1 G C scaffold5962 ScafM SNP 0010.scaffold00043 3894 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 3905 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 3937 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 3941 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 3944 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 3950 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 3972 1 A G scaffold5962 ScafM INDEL 0010.scaffold00043 3975 2 .. AT scaffold5962 ScafM INDEL 0010.scaffold00043 3992 2 .C TA scaffold5962 ScafM SNP 0010.scaffold00043 3995 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 4005 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4023 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4045 1 G A scaffold5962 ScafM INDEL 0010.scaffold00043 4496 1 T . scaffold5962 ScafM INDEL 0010.scaffold00043 4506 7 TCTCGAT ....... scaffold5962 ScafM SNP 0010.scaffold00043 4522 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4525 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 4545 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 4551 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 4561 1 T A scaffold5962 ScafM SNP 0010.scaffold00043 4582 1 A G scaffold5962 ScafM INDEL 0010.scaffold00043 4593 6 GCGTTA ...... scaffold5962 ScafM SNP 0010.scaffold00043 4630 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 4650 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 4665 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4669 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 4700 9 ACATGCATA ......... scaffold5962 ScafM SNP 0010.scaffold00043 4717 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4754 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 4764 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 4766 2 GT CC scaffold5962 ScafM SNP 0010.scaffold00043 4785 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 4801 1 T C scaffold5962 ScafM INDEL 0010.scaffold00043 4814 3 CCA ... scaffold5962 ScafM SNP 0010.scaffold00043 4822 2 TG AC scaffold5962 ScafM SNP 0010.scaffold00043 4825 1 T A scaffold5962 ScafM SNP 0010.scaffold00043 4828 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 4844 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 4848 1 . C scaffold5962 ScafM SNP 0010.scaffold00043 4850 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 4852 2 CC TG scaffold5962 ScafM INDEL 0010.scaffold00043 4855 2 TA .G scaffold5962 ScafM INDEL 0010.scaffold00043 4864 1 . A scaffold5962 ScafM INDEL 0010.scaffold00043 4869 1 C . scaffold5962 ScafM SNP 0010.scaffold00043 4888 1 C G scaffold5962 ScafM INDEL 0010.scaffold00043 4896 6 ...... TAGTGG scaffold5962 ScafM INDEL 0010.scaffold00043 4898 1 . C scaffold5962 ScafM INDEL 0010.scaffold00043 4899 1 . T scaffold5962 ScafM INDEL 0010.scaffold00043 4901 3 ... TCT scaffold5962 ScafM SNP 0010.scaffold00043 4904 1 G T scaffold5962 ScafM INDEL 0010.scaffold00043 4907 9 ......... ACCAACCAC scaffold5962 ScafM INDEL 0010.scaffold00043 4910 4 .... TATC scaffold5962 ScafM SNP 0010.scaffold00043 4912 2 CT AA scaffold5962 ScafM INDEL 0010.scaffold00043 4917 3 .GT CAG scaffold5962 ScafM INDEL 0010.scaffold00043 4921 3 ... AGA scaffold5962 ScafM INDEL 0010.scaffold00043 4923 3 ... AAC scaffold5962 ScafM SNP 0010.scaffold00043 4926 1 A T scaffold5962 ScafM SNP 0010.scaffold00043 4929 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 4931 2 CA TG scaffold5962 ScafM SNP 0010.scaffold00043 4934 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 4951 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 4960 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 4967 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 4982 2 CC TG scaffold5962 ScafM SNP 0010.scaffold00043 4989 1 G T scaffold5962 ScafM INDEL 0010.scaffold00043 4999 1 . A scaffold5962 ScafM SNP 0010.scaffold00043 5007 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 5090 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 5094 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 5098 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 5120 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 5140 1 . T scaffold5962 ScafM SNP 0010.scaffold00043 5164 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 5177 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 5205 3 ... TAA scaffold5962 ScafM SNP 0010.scaffold00043 5207 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 5218 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 5226 1 T A scaffold5962 ScafM SNP 0010.scaffold00043 5229 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 5244 4 .... AATG scaffold5962 ScafM INDEL 0010.scaffold00043 5248 3 ... AAC scaffold5962 ScafM SNP 0010.scaffold00043 5261 2 CG TT scaffold5962 ScafM INDEL 0010.scaffold00043 5276 2 TG .. scaffold5962 ScafM SNP 0010.scaffold00043 5284 1 C G scaffold5962 ScafM INDEL 0010.scaffold00043 5650 1 . G scaffold5962 ScafM SNP 0010.scaffold00043 5652 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 5661 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 5670 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 5885 1 . C scaffold5962 ScafM SNP 0010.scaffold00043 6476 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 6481 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 6487 1 T C scaffold5962 ScafM INDEL 0010.scaffold00043 6869 4 CTCT .... scaffold5962 ScafM INDEL 0010.scaffold00043 6898 1 . T scaffold5962 ScafM SNP 0010.scaffold00043 6931 1 C T scaffold5962 ScafM SNP 0010.scaffold00043 6973 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 6975 1 G T scaffold5962 ScafM SNP 0010.scaffold00043 6983 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 6999 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 7031 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 7036 1 C A scaffold5962 ScafM SNP 0010.scaffold00043 7038 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 7095 2 AC GA scaffold5962 ScafM SNP 0010.scaffold00043 7129 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 7133 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 7139 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 7143 1 C G scaffold5962 ScafM SNP 0010.scaffold00043 7149 1 G C scaffold5962 ScafM SNP 0010.scaffold00043 7153 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 7161 1 A G scaffold5962 ScafM SNP 0010.scaffold00043 7183 2 GC AA scaffold5962 ScafM SNP 0010.scaffold00043 7210 2 TC CT scaffold5962 ScafM SNP 0010.scaffold00043 7260 1 G C scaffold5962 ScafM SNP 0010.scaffold00043 7273 1 G A scaffold5962 ScafM SNP 0010.scaffold00043 7275 1 T A scaffold5962 ScafM SNP 0010.scaffold00043 7296 1 A C scaffold5962 ScafM SNP 0010.scaffold00043 7526 2 GC TG scaffold5962 ScafM INDEL 0010.scaffold00043 7531 1 G . scaffold5962 ScafM SNP 0010.scaffold00043 7550 1 T C scaffold5962 ScafM SNP 0010.scaffold00043 7594 1 C T scaffold5962 ScafM INDEL 0010.scaffold00043 7636 1 . T scaffold5962 ScafM INDEL 0010.scaffold00043 7666 2 TA .. scaffold5962 ScafM SNP 0010.scaffold00043 7688 1 T G scaffold5962 ScafM SNP 0010.scaffold00043 7734 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 7741 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 8089 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 8116 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 8125 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 8667 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 8674 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 9137 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 9164 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 9187 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 9199 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 9975 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 9977 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 10012 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 10104 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 10108 3 ... TAA scaffold10866 ScafM SNP 0010.scaffold00043 10126 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 10137 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 10141 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 10249 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 10259 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 10265 3 ... AAT scaffold10866 ScafM SNP 0010.scaffold00043 10273 1 G C scaffold10866 ReadM SNP 0010.scaffold00043 10423 1 G A - ReadM INDEL 0010.scaffold00043 10441 1 A . - Both SNP 0010.scaffold00043 10530 1 A G scaffold10866 Both INDEL 0010.scaffold00043 10542 1 . G scaffold10866 ScafM SNP 0010.scaffold00043 10606 1 G C scaffold10866 ScafM INDEL 0010.scaffold00043 10625 1 . A scaffold10866 ScafM INDEL 0010.scaffold00043 10628 5 ..... TGAAT scaffold10866 ScafM SNP 0010.scaffold00043 10637 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 10689 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 10745 2 CC TT scaffold10866 ScafM SNP 0010.scaffold00043 10749 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 10759 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 10761 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 10774 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 10781 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 10805 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 10816 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 10821 2 AT TA scaffold10866 ScafM SNP 0010.scaffold00043 10850 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11201 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 11642 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11645 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 11659 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11664 1 C A scaffold10866 ScafM INDEL 0010.scaffold00043 11689 3 ..C TTA scaffold10866 ScafM SNP 0010.scaffold00043 11701 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 11703 2 CG TT scaffold10866 ScafM SNP 0010.scaffold00043 11708 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11726 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 11748 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 11764 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 11777 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 11780 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 11785 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 11787 1 . C scaffold10866 ScafM SNP 0010.scaffold00043 11791 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11804 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 11828 12 ............ TGAAAGGTATTA scaffold10866 ScafM SNP 0010.scaffold00043 11842 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 11847 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 11859 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 11879 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 11908 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 11916 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 11920 2 AT GA scaffold10866 ScafM SNP 0010.scaffold00043 11923 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 11927 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 13110 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 13134 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 13136 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 13155 12 ............ ATAGAAATACCC scaffold10866 ScafM INDEL 0010.scaffold00043 13156 16 ................ CAAAAAAAAAAAAAAC scaffold10866 ScafM SNP 0010.scaffold00043 13162 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 13237 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 13247 8 TCAGCAAG ........ scaffold10866 ScafM SNP 0010.scaffold00043 13289 1 T A scaffold10866 ReadM SNP 0010.scaffold00043 13518 1 C A - ReadM SNP 0010.scaffold00043 13535 1 C T - ReadM SNP 0010.scaffold00043 13599 1 G T - ScafM INDEL 0010.scaffold00043 13670 7 AGTTAAA ....... scaffold10866 ScafM INDEL 0010.scaffold00043 13962 4 .... ATTA scaffold10866 Both SNP 0010.scaffold00043 14110 1 A G scaffold10866 Both SNP 0010.scaffold00043 14212 1 T G scaffold10866 Both SNP 0010.scaffold00043 14285 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 14304 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 14309 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 14322 1 C T scaffold10866 Both SNP 0010.scaffold00043 14373 1 T C scaffold10866 Both INDEL 0010.scaffold00043 14375 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 14378 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 14478 4 .... GGGG scaffold10866 Both SNP 0010.scaffold00043 14558 1 T C scaffold10866 Both SNP 0010.scaffold00043 14582 1 C A scaffold10866 Both SNP 0010.scaffold00043 14641 1 A G scaffold10866 Both SNP 0010.scaffold00043 14725 1 G C scaffold10866 ReadM SNP 0010.scaffold00043 14824 1 T A - ReadM SNP 0010.scaffold00043 14899 1 G A - ReadM INDEL 0010.scaffold00043 14960 2 .. TA - ReadM SNP 0010.scaffold00043 15153 1 A C - ReadM SNP 0010.scaffold00043 15166 1 A G - ScafM SNP 0010.scaffold00043 15188 1 A T scaffold10866 Both SNP 0010.scaffold00043 15289 1 C T scaffold10866 Both SNP 0010.scaffold00043 15333 1 A G scaffold10866 ReadM SNP 0010.scaffold00043 15402 1 A G - ReadM SNP 0010.scaffold00043 16023 1 G A - Both SNP 0010.scaffold00043 16030 1 A G scaffold10866 Both SNP 0010.scaffold00043 16085 1 A T scaffold10866 Both INDEL 0010.scaffold00043 16189 3 ... AAG scaffold10866 Both SNP 0010.scaffold00043 16385 1 C G scaffold10866 Both SNP 0010.scaffold00043 16398 1 T A scaffold10866 Both SNP 0010.scaffold00043 16536 1 T C scaffold10866 Both SNP 0010.scaffold00043 16542 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 16664 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 16696 1 G A scaffold10866 Both SNP 0010.scaffold00043 16743 1 C A scaffold10866 Both SNP 0010.scaffold00043 16746 1 T G scaffold10866 Both SNP 0010.scaffold00043 16772 1 C A scaffold10866 Both SNP 0010.scaffold00043 16823 1 G C scaffold10866 Both SNP 0010.scaffold00043 16893 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 16978 5 ..... TTAAA scaffold10866 Both SNP 0010.scaffold00043 17103 1 T C scaffold10866 Both SNP 0010.scaffold00043 17390 1 T C scaffold10866 ReadM SNP 0010.scaffold00043 17746 1 T C - ReadM SNP 0010.scaffold00043 17838 1 T G - Both SNP 0010.scaffold00043 18025 1 A C scaffold10866 Both SNP 0010.scaffold00043 18048 1 C G scaffold10866 Both SNP 0010.scaffold00043 18117 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 18196 3 TCT ... scaffold10866 ScafM INDEL 0010.scaffold00043 18200 2 GA .T scaffold10866 ScafM SNP 0010.scaffold00043 18437 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 18447 2 .. TA scaffold10866 ScafM SNP 0010.scaffold00043 18451 1 G T scaffold10866 Both SNP 0010.scaffold00043 18600 1 C G scaffold10866 Both SNP 0010.scaffold00043 19347 1 G A scaffold10866 Both SNP 0010.scaffold00043 19942 1 T C scaffold10866 Both SNP 0010.scaffold00043 19948 1 A G scaffold10866 Both SNP 0010.scaffold00043 20064 1 C T scaffold10866 Both SNP 0010.scaffold00043 20121 1 T C scaffold10866 Both SNP 0010.scaffold00043 20224 1 T G scaffold10866 Both SNP 0010.scaffold00043 20269 1 A T scaffold10866 ReadM SNP 0010.scaffold00043 20329 1 A G - ReadM SNP 0010.scaffold00043 20345 1 C T - ScafM SNP 0010.scaffold00043 20735 1 G A scaffold10866 ReadM SNP 0010.scaffold00043 21081 1 C T - ReadM SNP 0010.scaffold00043 21130 1 G A - ScafM INDEL 0010.scaffold00043 21247 7 ....... ACAGTTT scaffold10866 ScafM SNP 0010.scaffold00043 21285 1 C T scaffold10866 Both SNP 0010.scaffold00043 21578 1 C T scaffold10866 Both SNP 0010.scaffold00043 21998 1 G C scaffold10866 ScafM INDEL 0010.scaffold00043 22737 4 GCGT .... scaffold10866 ScafM SNP 0010.scaffold00043 22775 1 G A scaffold10866 Both SNP 0010.scaffold00043 23041 1 T C scaffold10866 Both SNP 0010.scaffold00043 23325 1 C A scaffold10866 Both SNP 0010.scaffold00043 23390 1 T G scaffold10866 Both SNP 0010.scaffold00043 23497 1 A G scaffold10866 Both SNP 0010.scaffold00043 23788 1 T C scaffold10866 Both SNP 0010.scaffold00043 23800 1 A C scaffold10866 Both SNP 0010.scaffold00043 23989 1 T C scaffold10866 Both SNP 0010.scaffold00043 24102 1 C T scaffold10866 Both SNP 0010.scaffold00043 24139 1 C T scaffold10866 Both SNP 0010.scaffold00043 24253 1 C A scaffold10866 Both SNP 0010.scaffold00043 24286 1 A G scaffold10866 Both SNP 0010.scaffold00043 24343 1 A G scaffold10866 Both SNP 0010.scaffold00043 24402 1 G A scaffold10866 Both SNP 0010.scaffold00043 24505 1 A G scaffold10866 Both SNP 0010.scaffold00043 24541 1 G A scaffold10866 Both SNP 0010.scaffold00043 24595 1 C A scaffold10866 Both SNP 0010.scaffold00043 24759 1 T G scaffold10866 Both SNP 0010.scaffold00043 25080 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 25218 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 25230 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 25241 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 25276 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 25293 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 25319 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 25351 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 25353 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 25385 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 25397 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 25410 1 G T scaffold10866 ScafM INDEL 0010.scaffold00043 25427 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 25429 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 25462 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 25505 1 T C scaffold10866 ReadM SNP 0010.scaffold00043 25824 1 A C - ReadM SNP 0010.scaffold00043 25913 1 G T - ReadM SNP 0010.scaffold00043 25928 1 A G - Both SNP 0010.scaffold00043 25956 1 A G scaffold10866 Both SNP 0010.scaffold00043 25960 1 G A scaffold10866 Both SNP 0010.scaffold00043 26131 1 G A scaffold10866 Both SNP 0010.scaffold00043 26167 1 A T scaffold10866 Both SNP 0010.scaffold00043 26286 1 T C scaffold10866 Both SNP 0010.scaffold00043 26292 1 A G scaffold10866 Both SNP 0010.scaffold00043 26303 1 T C scaffold10866 Both SNP 0010.scaffold00043 26327 1 T C scaffold10866 Both SNP 0010.scaffold00043 26360 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 26438 2 GT TG scaffold10866 ScafM SNP 0010.scaffold00043 26442 1 A G scaffold10866 Both SNP 0010.scaffold00043 26469 1 A C scaffold10866 Both SNP 0010.scaffold00043 26515 1 T C scaffold10866 Both SNP 0010.scaffold00043 26519 1 C A scaffold10866 Both SNP 0010.scaffold00043 26569 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 26597 2 TC CT scaffold10866 Both SNP 0010.scaffold00043 26650 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 26732 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 26734 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 26738 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 26742 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 26758 2 GA AG scaffold10866 ScafM SNP 0010.scaffold00043 26762 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 26770 1 T C scaffold10866 Both SNP 0010.scaffold00043 26782 1 A G scaffold10866 Both SNP 0010.scaffold00043 26815 1 G A scaffold10866 Both SNP 0010.scaffold00043 26885 1 G A scaffold10866 Both SNP 0010.scaffold00043 26926 1 A G scaffold10866 Both SNP 0010.scaffold00043 26987 1 A T scaffold10866 Both SNP 0010.scaffold00043 27157 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 27191 1 A C scaffold10866 Both SNP 0010.scaffold00043 27202 1 A G scaffold10866 Both SNP 0010.scaffold00043 27371 1 G C scaffold10866 Both SNP 0010.scaffold00043 27421 1 G T scaffold10866 Both SNP 0010.scaffold00043 27498 1 G A scaffold10866 Both SNP 0010.scaffold00043 27654 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 27774 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 27926 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 28092 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 28181 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 28188 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 28195 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 28235 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 28270 1 A G scaffold10866 Both SNP 0010.scaffold00043 28392 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 28520 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 28572 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 28589 1 T . scaffold10866 Both SNP 0010.scaffold00043 28883 1 G C scaffold10866 Both SNP 0010.scaffold00043 29138 1 T C scaffold10866 Both SNP 0010.scaffold00043 29196 1 T G scaffold10866 Both SNP 0010.scaffold00043 29268 1 C T scaffold10866 Both SNP 0010.scaffold00043 29467 1 C A scaffold10866 Both SNP 0010.scaffold00043 29581 1 T C scaffold10866 Both SNP 0010.scaffold00043 29626 1 G C scaffold10866 Both SNP 0010.scaffold00043 29634 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 29687 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 29691 8 ........ ATGTTGCC scaffold10866 Both SNP 0010.scaffold00043 29746 1 G A scaffold10866 Both SNP 0010.scaffold00043 29968 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 30026 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 30047 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 30055 1 C . scaffold10866 ScafM SNP 0010.scaffold00043 30062 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 30114 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 30146 7 ....... AGTTATC scaffold10866 Both SNP 0010.scaffold00043 30170 1 A G scaffold10866 Both SNP 0010.scaffold00043 30217 1 C T scaffold10866 Both SNP 0010.scaffold00043 30224 1 T G scaffold10866 Both INDEL 0010.scaffold00043 30327 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 30332 1 T A scaffold10866 Both SNP 0010.scaffold00043 30524 1 T C scaffold10866 Both SNP 0010.scaffold00043 30565 1 T C scaffold10866 Both SNP 0010.scaffold00043 30672 1 G C scaffold10866 Both SNP 0010.scaffold00043 30958 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 30979 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 31005 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 31013 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 31064 8 TCAATTAG ........ scaffold10866 ScafM SNP 0010.scaffold00043 31103 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 31113 1 C A scaffold10866 Both INDEL 0010.scaffold00043 31132 1 A . scaffold10866 Both SNP 0010.scaffold00043 31281 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 31337 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 31345 1 T A scaffold10866 Both SNP 0010.scaffold00043 31459 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 31630 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 32216 1 . T scaffold10866 Both SNP 0010.scaffold00043 34123 1 C T scaffold10866 Both INDEL 0010.scaffold00043 34153 1 . T scaffold10866 Both SNP 0010.scaffold00043 34211 1 T C scaffold10866 Both SNP 0010.scaffold00043 34281 1 T A scaffold10866 Both INDEL 0010.scaffold00043 34282 1 . T scaffold10866 Both SNP 0010.scaffold00043 34405 1 A G scaffold10866 Both SNP 0010.scaffold00043 34407 1 C T scaffold10866 Both INDEL 0010.scaffold00043 34484 2 .. TC scaffold10866 ScafM SNP 0010.scaffold00043 34562 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 34565 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 34619 3 AGC CAT scaffold10866 ScafM SNP 0010.scaffold00043 34644 2 TC AT scaffold10866 Both SNP 0010.scaffold00043 34681 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 34797 2 GT AC scaffold10866 Both SNP 0010.scaffold00043 34911 1 C T scaffold10866 ReadM SNP 0010.scaffold00043 35023 1 G C - ReadM SNP 0010.scaffold00043 35196 1 T C - ReadM SNP 0010.scaffold00043 35198 1 G A - ReadM INDEL 0010.scaffold00043 35212 1 A . - ReadM SNP 0010.scaffold00043 35359 1 G A - ReadM SNP 0010.scaffold00043 35695 1 T C - ReadM SNP 0010.scaffold00043 35806 1 G A - ReadM SNP 0010.scaffold00043 35822 1 T G - ReadM SNP 0010.scaffold00043 35840 1 A G - ReadM SNP 0010.scaffold00043 35870 1 T A - ReadM SNP 0010.scaffold00043 35903 1 G T - ReadM SNP 0010.scaffold00043 36144 1 T C - ReadM INDEL 0010.scaffold00043 36577 1 T . - ReadM SNP 0010.scaffold00043 36613 1 G A - ReadM SNP 0010.scaffold00043 36663 1 A G - ReadM SNP 0010.scaffold00043 36685 1 A G - ReadM SNP 0010.scaffold00043 36737 1 C A - ReadM SNP 0010.scaffold00043 36778 1 C T - ReadM SNP 0010.scaffold00043 36847 1 G T - ReadM SNP 0010.scaffold00043 36875 1 A T - ReadM SNP 0010.scaffold00043 37064 1 A T - ReadM SNP 0010.scaffold00043 37170 1 C T - ReadM SNP 0010.scaffold00043 37292 1 T C - ReadM SNP 0010.scaffold00043 37577 1 G A - ReadM SNP 0010.scaffold00043 37585 1 G C - Both SNP 0010.scaffold00043 37668 1 T C scaffold10866 Both SNP 0010.scaffold00043 37687 1 G T scaffold10866 ReadM SNP 0010.scaffold00043 37745 1 A C - ReadM SNP 0010.scaffold00043 37841 1 C T - ReadM SNP 0010.scaffold00043 37889 1 G A - ReadM SNP 0010.scaffold00043 37895 1 G T - ReadM SNP 0010.scaffold00043 37929 1 G A - ReadM SNP 0010.scaffold00043 38003 1 G A - ReadM SNP 0010.scaffold00043 38059 1 G C - ReadM SNP 0010.scaffold00043 38234 1 G A - ReadM SNP 0010.scaffold00043 38236 1 G A - ReadM SNP 0010.scaffold00043 38276 1 A G - ReadM SNP 0010.scaffold00043 38282 1 A G - ReadM SNP 0010.scaffold00043 38340 1 G A - ReadM SNP 0010.scaffold00043 38733 1 T C - ReadM SNP 0010.scaffold00043 38767 1 C T - Both SNP 0010.scaffold00043 38923 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 41760 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 41782 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 41820 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 41859 1 C T scaffold10866 Both INDEL 0010.scaffold00043 41983 2 .. TC scaffold10866 ScafM SNP 0010.scaffold00043 42010 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 42027 1 T A scaffold10866 Both SNP 0010.scaffold00043 42183 1 T A scaffold10866 Both SNP 0010.scaffold00043 42680 1 G A scaffold10866 ReadM SNP 0010.scaffold00043 43024 1 G A - Both SNP 0010.scaffold00043 43099 1 G C scaffold10866 Both SNP 0010.scaffold00043 43113 1 T G scaffold10866 Both SNP 0010.scaffold00043 43116 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 43143 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 43163 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 43201 33 ................................. CAATACTAGTTTTATGGGGAAGCGTTCATACCT scaffold10866 ScafM INDEL 0010.scaffold00043 43202 2 .. CC scaffold10866 ScafM SNP 0010.scaffold00043 43264 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 43277 1 G T scaffold10866 ReadM SNP 0010.scaffold00043 43296 1 C A - ScafM SNP 0010.scaffold00043 43297 1 A G scaffold10866 Both SNP 0010.scaffold00043 43431 1 T C scaffold10866 Both SNP 0010.scaffold00043 43477 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 43497 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 43510 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 43528 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 43532 1 A G scaffold10866 Both SNP 0010.scaffold00043 43543 1 C T scaffold10866 Both SNP 0010.scaffold00043 43800 1 C A scaffold10866 Both SNP 0010.scaffold00043 44492 1 C T scaffold10866 Both SNP 0010.scaffold00043 44633 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 44934 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 45185 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 45202 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 45207 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 45209 2 AA GG scaffold10866 ScafM SNP 0010.scaffold00043 45217 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 45234 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 45244 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 45246 2 CT TA scaffold10866 ScafM SNP 0010.scaffold00043 45270 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 45276 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 45282 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 45295 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 45303 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 45336 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 45338 8 ........ TGATTGAT scaffold10866 ScafM SNP 0010.scaffold00043 45364 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 45401 1 G T scaffold10866 ScafM INDEL 0010.scaffold00043 45417 4 GTAT .... scaffold10866 ScafM SNP 0010.scaffold00043 45433 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 45438 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 45447 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 45450 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 45459 2 CT AC scaffold10866 ScafM SNP 0010.scaffold00043 45483 1 C A scaffold10866 ScafM INDEL 0010.scaffold00043 45512 1 . T scaffold10866 ScafM INDEL 0010.scaffold00043 45516 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 45519 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 45522 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 45530 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 45550 3 ... CGT scaffold10866 ScafM SNP 0010.scaffold00043 45553 2 GT AA scaffold10866 ScafM SNP 0010.scaffold00043 45559 1 C G scaffold10866 ScafM INDEL 0010.scaffold00043 45573 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 45581 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 45611 10 .......... CCAAAAAGCA scaffold10866 ScafM INDEL 0010.scaffold00043 45615 7 ....... CTCTTAA scaffold10866 ScafM SNP 0010.scaffold00043 45646 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 45657 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 45667 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 45668 6 ...... TTGTTG scaffold10866 ScafM SNP 0010.scaffold00043 45682 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 45701 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 45887 1 A C scaffold10866 ScafM INDEL 0010.scaffold00043 45899 2 AT .. scaffold10866 ScafM INDEL 0010.scaffold00043 45904 1 G . scaffold10866 ScafM INDEL 0010.scaffold00043 45906 1 G . scaffold10866 ScafM SNP 0010.scaffold00043 45919 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 45971 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 45973 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 45977 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 45984 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 46017 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 46024 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 46026 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 46028 1 C A scaffold10866 Both SNP 0010.scaffold00043 46051 1 T A scaffold10866 Both SNP 0010.scaffold00043 46058 1 C T scaffold10866 Both SNP 0010.scaffold00043 46068 1 G C scaffold10866 Both SNP 0010.scaffold00043 46180 1 T C scaffold10866 Both SNP 0010.scaffold00043 46217 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 46243 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 46247 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 46251 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 46284 2 CG AA scaffold10866 ScafM INDEL 0010.scaffold00043 46368 28 TTGAAGTCTTGAACAGATAGTTGGAAGC ............................ scaffold10866 ScafM SNP 0010.scaffold00043 46406 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 46433 1 G C scaffold10866 ScafM INDEL 0010.scaffold00043 46688 5 ..... ACTCT scaffold10866 Both SNP 0010.scaffold00043 47177 1 T C scaffold10866 Both SNP 0010.scaffold00043 47218 1 G A scaffold10866 Both SNP 0010.scaffold00043 47369 1 T C scaffold10866 Both SNP 0010.scaffold00043 47420 1 G A scaffold10866 Both SNP 0010.scaffold00043 47480 1 A G scaffold10866 Both SNP 0010.scaffold00043 47790 1 G A scaffold10866 Both SNP 0010.scaffold00043 48024 1 T A scaffold10866 Both SNP 0010.scaffold00043 48038 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 48125 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 48132 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 48148 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 48158 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 48255 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 48258 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 48333 11 TTAGTGATTGT ........... scaffold10866 ScafM SNP 0010.scaffold00043 48362 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 48367 2 GA .. scaffold10866 ScafM INDEL 0010.scaffold00043 48370 3 TTG ... scaffold10866 ScafM INDEL 0010.scaffold00043 48377 1 T . scaffold10866 ScafM INDEL 0010.scaffold00043 48384 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 48397 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 48404 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 48418 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 48441 4 TGTG .... scaffold10866 ScafM INDEL 0010.scaffold00043 48447 3 TAG ... scaffold10866 ScafM INDEL 0010.scaffold00043 48470 3 ... TCT scaffold10866 ScafM INDEL 0010.scaffold00043 48471 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 48485 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 48504 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 48978 1 T C scaffold5397 ScafM INDEL 0010.scaffold00043 49055 1 C . scaffold5397 ScafM INDEL 0010.scaffold00043 49060 1 . T scaffold5397 ScafM INDEL 0010.scaffold00043 49065 3 AAT ... scaffold5397 ScafM SNP 0010.scaffold00043 49135 1 A C scaffold5397 ScafM SNP 0010.scaffold00043 49193 1 C G scaffold24565 ScafM SNP 0010.scaffold00043 49345 1 C T scaffold24565 ScafM SNP 0010.scaffold00043 49348 1 C T scaffold24565 ScafM SNP 0010.scaffold00043 49351 1 G C scaffold24565 ScafM SNP 0010.scaffold00043 49371 1 A T scaffold24565 ScafM SNP 0010.scaffold00043 49373 1 A G scaffold24565 ScafM INDEL 0010.scaffold00043 49402 3 TTT ... scaffold24565 ScafM SNP 0010.scaffold00043 49432 1 C A scaffold24565 ScafM INDEL 0010.scaffold00043 49443 1 . T scaffold24565 ScafM SNP 0010.scaffold00043 49457 1 G A scaffold24565 ScafM SNP 0010.scaffold00043 49463 1 C T scaffold24565 ScafM SNP 0010.scaffold00043 51363 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 51380 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 51414 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51439 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51441 1 G C scaffold10866 ScafM INDEL 0010.scaffold00043 51446 1 . C scaffold10866 ScafM SNP 0010.scaffold00043 51450 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51462 2 CC AA scaffold10866 ScafM SNP 0010.scaffold00043 51465 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 51468 4 .... CAGT scaffold10866 ScafM INDEL 0010.scaffold00043 51472 2 .. CC scaffold10866 ScafM SNP 0010.scaffold00043 51473 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 51475 1 . G scaffold10866 ScafM SNP 0010.scaffold00043 51481 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 51484 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 51487 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51490 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 51512 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 51530 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 51532 5 AAAAA TTTTT scaffold10866 ScafM SNP 0010.scaffold00043 51540 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 51543 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 51548 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 51552 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 51586 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51641 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 51649 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 51667 2 GA AT scaffold10866 ScafM INDEL 0010.scaffold00043 51679 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 51683 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 51700 1 G T scaffold10866 ScafM INDEL 0010.scaffold00043 51720 19 ................... TATTAACTTTTGATAGTTT scaffold10866 ScafM SNP 0010.scaffold00043 51740 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 51756 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 51785 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 51811 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 51823 23 GCTTCAAAGGATTAGTTGAACCT ....................... scaffold10866 ScafM INDEL 0010.scaffold00043 51853 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 51873 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 51900 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 51912 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 51945 2 AG GT scaffold10866 ScafM SNP 0010.scaffold00043 51972 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 51984 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 52030 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 52059 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 52096 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 52115 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 52128 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52134 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52140 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52149 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 52182 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 52197 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52199 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52218 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 52233 6 ...... GCAAAG scaffold10866 ScafM INDEL 0010.scaffold00043 52235 4 .... TATT scaffold10866 ScafM SNP 0010.scaffold00043 52238 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 52295 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52298 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 52340 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 52359 2 .. AA scaffold10866 ScafM SNP 0010.scaffold00043 52361 1 G T scaffold10866 ScafM INDEL 0010.scaffold00043 52374 1 . G scaffold10866 ScafM INDEL 0010.scaffold00043 52378 2 .. CA scaffold10866 ScafM SNP 0010.scaffold00043 52392 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52419 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 52425 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52439 2 TG CT scaffold10866 ScafM SNP 0010.scaffold00043 52450 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52481 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52495 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 52503 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 52525 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 52540 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 52561 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52575 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 52578 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 52607 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 52622 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 52634 8 AAAAACGC ........ scaffold10866 ScafM INDEL 0010.scaffold00043 52644 4 TTTC .... scaffold10866 ScafM SNP 0010.scaffold00043 52650 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 52653 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 52656 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 52660 1 C . scaffold10866 ScafM INDEL 0010.scaffold00043 52662 4 AAAG .... scaffold10866 ScafM SNP 0010.scaffold00043 52678 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52711 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 52737 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 52742 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52753 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 52756 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 52775 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 52820 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 52822 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52843 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 52857 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 52870 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 52874 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52895 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 52917 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 52919 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 52975 3 ... GTG scaffold10866 ScafM SNP 0010.scaffold00043 53003 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 53018 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 53028 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 53034 2 TA .. scaffold10866 ScafM SNP 0010.scaffold00043 53060 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 53099 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 53134 1 C A scaffold10866 ReadM SNP 0010.scaffold00043 53498 1 A T - ScafM INDEL 0010.scaffold00043 53968 3 ... GTT scaffold10866 ScafM INDEL 0010.scaffold00043 53969 2 .. CG scaffold10866 ScafM SNP 0010.scaffold00043 53992 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 53996 2 AA GG scaffold10866 ScafM INDEL 0010.scaffold00043 53998 2 .. TG scaffold10866 ScafM INDEL 0010.scaffold00043 54000 2 .. GG scaffold10866 ScafM SNP 0010.scaffold00043 54004 1 A C scaffold10866 ScafM INDEL 0010.scaffold00043 54005 2 .. CG scaffold10866 ScafM INDEL 0010.scaffold00043 54011 1 . T scaffold10866 ScafM INDEL 0010.scaffold00043 54045 1 C . scaffold10866 ScafM INDEL 0010.scaffold00043 54047 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 54049 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 54060 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 54080 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 54232 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 54267 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 54270 1 G T scaffold10866 Both SNP 0010.scaffold00043 54481 1 G A scaffold10866 Both SNP 0010.scaffold00043 54674 1 A C scaffold10866 Both SNP 0010.scaffold00043 54787 1 G A scaffold10866 Both SNP 0010.scaffold00043 54824 1 G A scaffold10866 Both INDEL 0010.scaffold00043 55014 1 . A scaffold10866 Both SNP 0010.scaffold00043 55745 1 G A scaffold10866 Both SNP 0010.scaffold00043 56071 1 T C scaffold10866 Both SNP 0010.scaffold00043 56228 1 C T scaffold10866 Both INDEL 0010.scaffold00043 56479 2 .. AA scaffold10866 Both SNP 0010.scaffold00043 56537 1 A G scaffold10866 Both SNP 0010.scaffold00043 56619 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 56976 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 56987 7 ....... CCATTGT scaffold10866 ScafM SNP 0010.scaffold00043 57230 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 57278 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 57289 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 57601 1 C T scaffold10866 Both SNP 0010.scaffold00043 57908 1 G T scaffold10866 Both SNP 0010.scaffold00043 59301 1 C A scaffold10866 ReadM SNP 0010.scaffold00043 59597 1 T C - ReadM SNP 0010.scaffold00043 59710 1 A T - ReadM INDEL 0010.scaffold00043 59844 1 A . - ReadM SNP 0010.scaffold00043 59977 1 A T - ReadM SNP 0010.scaffold00043 60006 1 A G - Both SNP 0010.scaffold00043 60083 1 C A scaffold10866 ReadM SNP 0010.scaffold00043 60321 1 T C - ReadM INDEL 0010.scaffold00043 60449 1 T . - ReadM SNP 0010.scaffold00043 60510 1 A G - ReadM SNP 0010.scaffold00043 60608 1 G T - ReadM SNP 0010.scaffold00043 60897 1 A C - ReadM SNP 0010.scaffold00043 60992 1 C T - Both SNP 0010.scaffold00043 61038 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 61297 8 ACTACACC ........ scaffold10866 ScafM SNP 0010.scaffold00043 61312 1 A C scaffold10866 Both SNP 0010.scaffold00043 61410 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 62096 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 62195 1 C T scaffold10866 Both INDEL 0010.scaffold00043 62881 1 A . scaffold10866 Both SNP 0010.scaffold00043 62919 1 T G scaffold10866 Both SNP 0010.scaffold00043 62923 1 A G scaffold10866 ReadM SNP 0010.scaffold00043 63109 1 A C - ReadM SNP 0010.scaffold00043 63116 1 T C - ReadM SNP 0010.scaffold00043 63212 1 G A - ReadM SNP 0010.scaffold00043 63274 1 C T - Both SNP 0010.scaffold00043 64223 1 T C scaffold10866 Both SNP 0010.scaffold00043 64359 1 T G scaffold10866 Both INDEL 0010.scaffold00043 64647 2 AA .. scaffold10866 Both INDEL 0010.scaffold00043 64916 2 TT .. scaffold10866 ScafM SNP 0010.scaffold00043 64970 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 64976 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 65327 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 65373 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 65377 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 65395 1 A T scaffold10866 Both SNP 0010.scaffold00043 65446 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 65556 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 65559 1 C A scaffold10866 ScafM INDEL 0010.scaffold00043 65607 1 C . scaffold10866 ScafM SNP 0010.scaffold00043 65700 2 AT TG scaffold10866 ScafM SNP 0010.scaffold00043 65726 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 65828 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 66058 1 T . scaffold10866 ScafM INDEL 0010.scaffold00043 66133 2 TT .. scaffold10866 Both SNP 0010.scaffold00043 66401 1 C A scaffold10866 ScafM INDEL 0010.scaffold00043 66447 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 66453 1 A G scaffold10866 Both SNP 0010.scaffold00043 66821 1 A C scaffold10866 Both SNP 0010.scaffold00043 66840 1 T C scaffold10866 Both SNP 0010.scaffold00043 67946 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 68398 21 ..................... TTTGATTGTATAAGATGAGAT scaffold10866 Both SNP 0010.scaffold00043 68422 1 T C scaffold10866 Both SNP 0010.scaffold00043 68428 1 A T scaffold10866 Both SNP 0010.scaffold00043 68519 1 C T scaffold10866 Both SNP 0010.scaffold00043 68557 1 A T scaffold10866 Both INDEL 0010.scaffold00043 68617 1 . A scaffold10866 Both SNP 0010.scaffold00043 68644 1 G T scaffold10866 Both SNP 0010.scaffold00043 68664 1 C A scaffold10866 Both SNP 0010.scaffold00043 68688 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 68763 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 68765 1 A G scaffold10866 Both SNP 0010.scaffold00043 68804 1 A G scaffold10866 Both SNP 0010.scaffold00043 68970 1 G A scaffold10866 Both SNP 0010.scaffold00043 69089 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 69282 1 C T scaffold10866 ReadM SNP 0010.scaffold00043 70378 1 C A - ReadM SNP 0010.scaffold00043 70687 1 A G - ReadM SNP 0010.scaffold00043 70779 1 A G - ReadM SNP 0010.scaffold00043 70950 1 T C - Both SNP 0010.scaffold00043 71186 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 71587 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 71589 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 71611 8 ........ GACTTGCA scaffold10866 ScafM SNP 0010.scaffold00043 71928 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 72019 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 72026 4 .... TAGC scaffold10866 ScafM SNP 0010.scaffold00043 72032 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 72034 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 72059 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 72068 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 72120 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 72129 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 72156 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 72158 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 72424 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 72450 7 ....... AGTAAGA scaffold10866 ScafM SNP 0010.scaffold00043 72455 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 72466 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 72499 1 A C scaffold10866 ScafM INDEL 0010.scaffold00043 72515 4 AAAT .... scaffold10866 ScafM SNP 0010.scaffold00043 72691 1 G A scaffold10866 Both SNP 0010.scaffold00043 72745 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 72785 1 T A scaffold10866 Both INDEL 0010.scaffold00043 72895 1 T . scaffold10866 Both SNP 0010.scaffold00043 72916 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 73319 2 AA .G scaffold10866 ScafM SNP 0010.scaffold00043 73323 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 73366 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 73392 8 ........ ACGGTGAG scaffold10866 ScafM SNP 0010.scaffold00043 73399 1 C A scaffold10866 ScafM INDEL 0010.scaffold00043 73419 1 . G scaffold10866 ScafM INDEL 0010.scaffold00043 73480 8 GTCATATT ........ scaffold10866 ScafM SNP 0010.scaffold00043 73497 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 73503 3 CAC ATT scaffold10866 ScafM INDEL 0010.scaffold00043 73521 4 .... AAAT scaffold10866 ScafM INDEL 0010.scaffold00043 73522 1 . G scaffold10866 ScafM INDEL 0010.scaffold00043 73548 14 .............. CTTTTTTTCTTTTG scaffold10866 ScafM SNP 0010.scaffold00043 73553 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73556 2 AC GT scaffold10866 ScafM INDEL 0010.scaffold00043 73560 1 . T scaffold10866 ScafM SNP 0010.scaffold00043 73563 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 73570 1 . C scaffold10866 ScafM INDEL 0010.scaffold00043 73584 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 73586 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 73590 2 TC .. scaffold10866 ScafM SNP 0010.scaffold00043 73593 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 73597 3 TCC ... scaffold10866 ScafM SNP 0010.scaffold00043 73602 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 73606 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 73609 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 73611 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73613 2 AG TA scaffold10866 ScafM SNP 0010.scaffold00043 73619 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73637 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 73647 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 73669 2 CA .T scaffold10866 ScafM SNP 0010.scaffold00043 73686 1 G T scaffold10866 ScafM INDEL 0010.scaffold00043 73691 4 .... ATAT scaffold10866 ScafM SNP 0010.scaffold00043 73710 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 73716 1 G . scaffold10866 ScafM SNP 0010.scaffold00043 73721 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 73723 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73736 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 73740 2 .. AA scaffold10866 ScafM INDEL 0010.scaffold00043 73743 4 .... AACA scaffold10866 ScafM INDEL 0010.scaffold00043 73746 1 . T scaffold10866 ScafM INDEL 0010.scaffold00043 73748 1 . C scaffold10866 ScafM SNP 0010.scaffold00043 73759 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 73764 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 73768 5 AAATT ..... scaffold10866 ScafM SNP 0010.scaffold00043 73775 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 73780 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 73794 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73801 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 73832 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 73862 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73915 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 73920 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 73923 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 73951 3 TAT ... scaffold10866 ScafM SNP 0010.scaffold00043 73960 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 73978 3 ... ATG scaffold10866 ScafM SNP 0010.scaffold00043 74019 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 74031 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 74037 2 .. AC scaffold10866 ScafM SNP 0010.scaffold00043 74039 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 74043 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 74057 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 74068 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 74081 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 74089 1 T G scaffold10866 ScafM INDEL 0010.scaffold00043 74109 4 .... TCAA scaffold10866 ScafM SNP 0010.scaffold00043 74114 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 74125 1 C T scaffold10866 Both SNP 0010.scaffold00043 74169 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 74239 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 74247 1 T G scaffold10866 Both SNP 0010.scaffold00043 74358 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 74410 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 74423 1 A T scaffold10866 ScafM INDEL 0010.scaffold00043 74451 2 .A CT scaffold10866 ScafM SNP 0010.scaffold00043 74458 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 74501 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 74519 1 A C scaffold10866 ScafM SNP 0010.scaffold00043 74763 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 74780 1 A G scaffold10866 ReadM SNP 0010.scaffold00043 74897 1 A C - ReadM INDEL 0010.scaffold00043 74933 1 A . - Both INDEL 0010.scaffold00043 75031 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 75219 5 GCCGG ..... scaffold10866 Both SNP 0010.scaffold00043 75289 1 A G scaffold10866 Both SNP 0010.scaffold00043 75293 1 A C scaffold10866 Both SNP 0010.scaffold00043 75395 1 T C scaffold10866 Both SNP 0010.scaffold00043 75407 1 T G scaffold10866 Both SNP 0010.scaffold00043 75419 1 C T scaffold10866 ReadM SNP 0010.scaffold00043 75487 1 C T - ScafM INDEL 0010.scaffold00043 76395 27 ........................... TGCTGATTTTCTTAATTAAAGCTTTTT scaffold10866 ScafM SNP 0010.scaffold00043 76416 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 76436 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 76440 1 A G scaffold10866 Both SNP 0010.scaffold00043 76475 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 76603 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 76632 8 ........ ACTATATT scaffold10866 ScafM INDEL 0010.scaffold00043 76751 19 ................... CCCACTACTAAAATGGAAG scaffold10866 ScafM SNP 0010.scaffold00043 76788 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 76858 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 77447 2 AA TT scaffold10866 ScafM INDEL 0010.scaffold00043 77570 1 . A scaffold10866 Both SNP 0010.scaffold00043 77636 1 T A scaffold10866 Both SNP 0010.scaffold00043 77731 1 A G scaffold10866 ReadM SNP 0010.scaffold00043 77783 1 A C - Both INDEL 0010.scaffold00043 78531 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 78664 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 78728 1 C T scaffold10866 Both SNP 0010.scaffold00043 78844 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 78997 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 80735 1 G A scaffold10866 Both SNP 0010.scaffold00043 82399 1 A G scaffold10866 Both SNP 0010.scaffold00043 85722 1 A G scaffold10866 Both SNP 0010.scaffold00043 86073 1 C A scaffold10866 ReadM SNP 0010.scaffold00043 86784 1 A G - ScafM SNP 0010.scaffold00043 91150 1 T G scaffold10866 ScafM SNP 0010.scaffold00043 91339 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 91593 1 T A scaffold10866 ScafM INDEL 0010.scaffold00043 91630 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 91679 2 AG CA scaffold10866 ScafM INDEL 0010.scaffold00043 91685 2 .. TA scaffold10866 ScafM SNP 0010.scaffold00043 91695 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 91701 1 T A scaffold10866 ReadM SNP 0010.scaffold00043 91828 1 G A - ScafM INDEL 0010.scaffold00043 92053 4 AAAA .... scaffold10866 Both SNP 0010.scaffold00043 92243 1 T C scaffold10866 Both SNP 0010.scaffold00043 92273 1 C T scaffold10866 Both SNP 0010.scaffold00043 92290 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 92397 1 G T scaffold10866 ScafM SNP 0010.scaffold00043 93002 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 93007 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 93011 1 T C scaffold10866 Both SNP 0010.scaffold00043 93032 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 93175 4 .... AGAT scaffold10866 ScafM SNP 0010.scaffold00043 93177 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 93201 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 93208 4 TAAT .... scaffold10866 Both SNP 0010.scaffold00043 93222 1 T C scaffold10866 Both SNP 0010.scaffold00043 93399 1 A G scaffold10866 Both SNP 0010.scaffold00043 93409 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 93556 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 93558 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 93567 8 ........ CAATGAGA scaffold10866 ScafM INDEL 0010.scaffold00043 93586 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 93591 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 93622 2 AC .G scaffold10866 ScafM SNP 0010.scaffold00043 93626 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 93635 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 93760 11 CATTTTTTTTG ........... scaffold10866 ScafM INDEL 0010.scaffold00043 93808 8 GCCTATCT ........ scaffold10866 ScafM SNP 0010.scaffold00043 93847 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 93864 2 AG GA scaffold10866 ScafM INDEL 0010.scaffold00043 93928 2 AG .. scaffold10866 ScafM INDEL 0010.scaffold00043 93931 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 93974 1 A T scaffold10866 Both SNP 0010.scaffold00043 94241 1 A G scaffold10866 Both SNP 0010.scaffold00043 94261 1 T A scaffold10866 ReadM SNP 0010.scaffold00043 94384 1 C T - ReadM SNP 0010.scaffold00043 94472 1 T G - ReadM SNP 0010.scaffold00043 94479 1 T A - ReadM SNP 0010.scaffold00043 94485 1 T G - ScafM SNP 0010.scaffold00043 94523 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 94536 1 G . scaffold10866 ScafM SNP 0010.scaffold00043 94542 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 94545 1 G A scaffold10866 Both SNP 0010.scaffold00043 94917 1 A G scaffold10866 Both SNP 0010.scaffold00043 94992 1 C T scaffold10866 Both SNP 0010.scaffold00043 95055 1 G A scaffold10866 Both SNP 0010.scaffold00043 95070 1 G A scaffold10866 ReadM SNP 0010.scaffold00043 95236 1 G A - ReadM SNP 0010.scaffold00043 95253 1 T A - Both SNP 0010.scaffold00043 95344 1 T G scaffold10866 Both SNP 0010.scaffold00043 95497 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 95515 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 95517 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 95524 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 95526 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 95546 1 A T scaffold10866 ScafM SNP 0010.scaffold00043 95554 1 G C scaffold10866 ScafM SNP 0010.scaffold00043 95566 1 G A scaffold10866 ScafM INDEL 0010.scaffold00043 95578 1 . G scaffold10866 ScafM INDEL 0010.scaffold00043 95581 1 T . scaffold10866 Both SNP 0010.scaffold00043 95676 1 C G scaffold10866 Both SNP 0010.scaffold00043 95683 1 C T scaffold10866 Both SNP 0010.scaffold00043 95836 1 G T scaffold10866 Both SNP 0010.scaffold00043 96266 1 A G scaffold10866 Both SNP 0010.scaffold00043 96324 1 C T scaffold10866 Both INDEL 0010.scaffold00043 96358 1 . A scaffold10866 Both SNP 0010.scaffold00043 96366 1 A G scaffold10866 Both SNP 0010.scaffold00043 96421 1 T G scaffold10866 Both SNP 0010.scaffold00043 96740 1 G A scaffold10866 Both SNP 0010.scaffold00043 96784 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 96947 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 96955 1 T C scaffold10866 Both INDEL 0010.scaffold00043 96978 2 TA .. scaffold10866 ScafM SNP 0010.scaffold00043 97155 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 97162 1 C T scaffold10866 ScafM SNP 0010.scaffold00043 97172 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 97180 1 G T scaffold10866 Both SNP 0010.scaffold00043 97263 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 97649 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 98036 1 A G scaffold10866 Both SNP 0010.scaffold00043 98562 1 A G scaffold10866 Both SNP 0010.scaffold00043 98937 1 A G scaffold10866 Both SNP 0010.scaffold00043 98946 1 A G scaffold10866 Both SNP 0010.scaffold00043 99300 1 T A scaffold10866 Both SNP 0010.scaffold00043 99484 1 G C scaffold10866 Both SNP 0010.scaffold00043 99666 1 G A scaffold10866 Both SNP 0010.scaffold00043 100025 1 T C scaffold10866 Both SNP 0010.scaffold00043 100549 1 T C scaffold10866 Both SNP 0010.scaffold00043 100579 1 A C scaffold10866 Both SNP 0010.scaffold00043 100623 1 A C scaffold10866 Both SNP 0010.scaffold00043 100740 1 T G scaffold10866 Both INDEL 0010.scaffold00043 100812 1 . T scaffold10866 Both SNP 0010.scaffold00043 100955 1 T C scaffold10866 ReadM SNP 0010.scaffold00043 101466 1 C T - ReadM INDEL 0010.scaffold00043 101469 2 AA .. - ReadM SNP 0010.scaffold00043 101640 1 G T - ReadM SNP 0010.scaffold00043 101673 1 A G - ReadM SNP 0010.scaffold00043 101709 1 T G - Both SNP 0010.scaffold00043 102131 1 G T scaffold10866 Both SNP 0010.scaffold00043 102176 1 G A scaffold10866 Both SNP 0010.scaffold00043 102206 1 G T scaffold10866 Both SNP 0010.scaffold00043 102272 1 T C scaffold10866 Both SNP 0010.scaffold00043 102296 1 G A scaffold10866 Both SNP 0010.scaffold00043 102313 1 G A scaffold10866 Both SNP 0010.scaffold00043 102381 1 G C scaffold10866 Both SNP 0010.scaffold00043 102519 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 102651 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 102663 6 ...... CAGTAT scaffold10866 ScafM SNP 0010.scaffold00043 102690 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 102742 1 C G scaffold10866 ScafM SNP 0010.scaffold00043 102770 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 102773 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 102778 1 T C scaffold10866 ScafM SNP 0010.scaffold00043 102782 1 C T scaffold10866 ReadM INDEL 0010.scaffold00043 102898 2 .. GC - ScafM SNP 0010.scaffold00043 102932 1 G A scaffold10866 Both SNP 0010.scaffold00043 102947 1 T G scaffold10866 ReadM SNP 0010.scaffold00043 103190 1 A C - Both SNP 0010.scaffold00043 103410 1 C T scaffold10866 ScafM INDEL 0010.scaffold00043 103478 28 ............................ TTTGCGAACTCAGCGGTACAGACAGAGG scaffold10866 Both SNP 0010.scaffold00043 103498 1 A G scaffold10866 Both SNP 0010.scaffold00043 103516 1 G A scaffold10866 ReadM SNP 0010.scaffold00043 103664 1 G C - ReadM SNP 0010.scaffold00043 103685 1 C T - Both SNP 0010.scaffold00043 103752 1 A T scaffold10866 Both INDEL 0010.scaffold00043 103768 2 CA .. scaffold10866 Both SNP 0010.scaffold00043 104088 1 C T scaffold10866 Both SNP 0010.scaffold00043 104124 1 G C scaffold10866 Both SNP 0010.scaffold00043 104133 1 T C scaffold10866 Both SNP 0010.scaffold00043 104181 1 T A scaffold10866 Both SNP 0010.scaffold00043 104830 1 C A scaffold10866 Both SNP 0010.scaffold00043 105644 1 T A scaffold10866 Both SNP 0010.scaffold00043 107250 1 C T scaffold10866 Both SNP 0010.scaffold00043 107281 1 A G scaffold10866 Both SNP 0010.scaffold00043 107287 1 A C scaffold10866 ScafM INDEL 0010.scaffold00043 107546 8 ........ AGTATTCT scaffold10866 ScafM SNP 0010.scaffold00043 108367 2 TA CG scaffold10866 ScafM INDEL 0010.scaffold00043 108642 2 TA .. scaffold10866 ScafM INDEL 0010.scaffold00043 108684 1 T . scaffold10866 ScafM SNP 0010.scaffold00043 109044 2 AA TT scaffold10866 Both SNP 0010.scaffold00043 109087 1 C A scaffold10866 ScafM SNP 0010.scaffold00043 109306 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 109319 8 CTGTCAGT ........ scaffold10866 ScafM SNP 0010.scaffold00043 109335 1 C T scaffold10866 Both SNP 0010.scaffold00043 109357 1 T C scaffold10866 Both SNP 0010.scaffold00043 109423 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 109576 5 ..... ATTGA scaffold10866 ScafM SNP 0010.scaffold00043 109579 2 CC AG scaffold10866 ScafM SNP 0010.scaffold00043 109582 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 109584 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 109585 2 .. AC scaffold10866 ScafM INDEL 0010.scaffold00043 109587 3 ... CCC scaffold10866 ScafM INDEL 0010.scaffold00043 109588 1 . G scaffold10866 ScafM INDEL 0010.scaffold00043 109589 4 .... GCCC scaffold10866 ScafM SNP 0010.scaffold00043 109591 1 T C scaffold10866 ScafM INDEL 0010.scaffold00043 109592 3 .TT AAG scaffold10866 ScafM INDEL 0010.scaffold00043 109596 2 .G AA scaffold10866 ScafM INDEL 0010.scaffold00043 109599 2 .. GG scaffold10866 ScafM INDEL 0010.scaffold00043 109602 3 ... AGA scaffold10866 ScafM INDEL 0010.scaffold00043 109603 2 .T AG scaffold10866 ScafM SNP 0010.scaffold00043 109606 4 CGGG TTTA scaffold10866 ScafM INDEL 0010.scaffold00043 109612 1 . C scaffold10866 ScafM SNP 0010.scaffold00043 109615 1 G C scaffold10866 Both INDEL 0010.scaffold00043 109801 1 . C scaffold10866 Both SNP 0010.scaffold00043 109829 1 C G scaffold10866 Both SNP 0010.scaffold00043 109873 1 A C scaffold10866 Both SNP 0010.scaffold00043 109915 1 A G scaffold10866 Both SNP 0010.scaffold00043 110364 1 C A scaffold10866 Both SNP 0010.scaffold00043 110376 1 A G scaffold10866 Both SNP 0010.scaffold00043 110543 1 C T scaffold10866 ReadM SNP 0010.scaffold00043 110949 1 A T - Both INDEL 0010.scaffold00043 111573 1 . A scaffold10866 ScafM SNP 0010.scaffold00043 111593 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 111597 3 TTT GGG scaffold10866 ScafM INDEL 0010.scaffold00043 111601 7 ....... GGGGGGG scaffold10866 ScafM INDEL 0010.scaffold00043 111780 7 ....... CTGGTAA scaffold10866 Both SNP 0010.scaffold00043 111948 1 C T scaffold10866 Both SNP 0010.scaffold00043 112416 1 C T scaffold10866 Both SNP 0010.scaffold00043 112591 1 C A scaffold10866 Both SNP 0010.scaffold00043 112666 1 C T scaffold10866 ReadM SNP 0010.scaffold00043 112708 1 T C - ReadM SNP 0010.scaffold00043 112863 1 G A - ReadM SNP 0010.scaffold00043 112890 1 A G - ReadM SNP 0010.scaffold00043 112951 1 C T - ReadM SNP 0010.scaffold00043 112969 1 C G - Both SNP 0010.scaffold00043 113090 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 113114 8 ACTATATA ........ scaffold10866 Both SNP 0010.scaffold00043 113358 1 C T scaffold10866 Both SNP 0010.scaffold00043 113416 1 T C scaffold10866 Both SNP 0010.scaffold00043 113473 1 A G scaffold10866 Both SNP 0010.scaffold00043 113769 1 A G scaffold10866 Both SNP 0010.scaffold00043 113823 1 A T scaffold10866 Both SNP 0010.scaffold00043 114082 1 C T scaffold10866 Both SNP 0010.scaffold00043 114135 1 G T scaffold10866 Both SNP 0010.scaffold00043 114171 1 G A scaffold10866 Both SNP 0010.scaffold00043 114214 1 A C scaffold10866 Both SNP 0010.scaffold00043 114266 1 A G scaffold10866 Both SNP 0010.scaffold00043 114379 1 A G scaffold10866 ScafM INDEL 0010.scaffold00043 114412 1 A . scaffold10866 ScafM INDEL 0010.scaffold00043 114426 1 A . scaffold10866 Both SNP 0010.scaffold00043 115378 1 A G scaffold10866 Both SNP 0010.scaffold00043 115401 1 T A scaffold10866 Both SNP 0010.scaffold00043 115427 1 G A scaffold10866 Both SNP 0010.scaffold00043 115587 1 G A scaffold10866 Both INDEL 0010.scaffold00043 115681 2 AC .. scaffold10866 ScafM INDEL 0010.scaffold00043 115724 12 ............ TCCCCCCCCCCC scaffold10866 ScafM INDEL 0010.scaffold00043 115732 7 ....... CCCCCCA scaffold10866 ScafM INDEL 0010.scaffold00043 115748 1 . A scaffold10866 Both SNP 0010.scaffold00043 115913 1 G C scaffold10866 Both SNP 0010.scaffold00043 115972 1 T C scaffold10866 Both INDEL 0010.scaffold00043 115978 1 A . scaffold10866 ScafM SNP 0010.scaffold00043 116029 2 TA CG scaffold10866 Both SNP 0010.scaffold00043 116059 1 T A scaffold10866 Both SNP 0010.scaffold00043 116106 1 C T scaffold10866 Both SNP 0010.scaffold00043 116184 1 A C scaffold10866 ScafM INDEL 0010.scaffold00043 116243 1 . A scaffold10866 Both INDEL 0010.scaffold00043 116293 1 A . scaffold10866 Both SNP 0010.scaffold00043 116447 1 T G scaffold10866 Both SNP 0010.scaffold00043 116701 1 A T scaffold10866 Both SNP 0010.scaffold00043 116712 1 G A scaffold10866 ScafM SNP 0010.scaffold00043 116856 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 116862 1 T A scaffold10866 ScafM SNP 0010.scaffold00043 116880 1 A G scaffold10866 ScafM SNP 0010.scaffold00043 116888 1 G A scaffold10866 ReadM SNP 0010.scaffold00043 116944 1 G A - ReadM SNP 0010.scaffold00043 116983 1 G T - ScafM INDEL 0010.scaffold00043 127761 2 .. CA scaffold905 ScafM SNP 0010.scaffold00043 127764 1 C A scaffold905 ScafM SNP 0010.scaffold00043 127787 1 C T scaffold905 ScafM SNP 0010.scaffold00043 127807 1 T C scaffold905 ScafM SNP 0010.scaffold00043 127829 1 G A scaffold905 ScafM SNP 0010.scaffold00043 127841 1 C T scaffold905 ScafM SNP 0010.scaffold00043 127848 1 G A scaffold905 ScafM SNP 0010.scaffold00043 127888 1 C T scaffold905 ScafM SNP 0010.scaffold00043 127898 1 C T scaffold905 ScafM SNP 0010.scaffold00043 127931 1 T G scaffold905 ScafM SNP 0010.scaffold00043 127946 1 A T scaffold905 ScafM SNP 0010.scaffold00043 127950 1 G C scaffold905 ScafM SNP 0010.scaffold00043 127970 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128010 1 G T scaffold905 ScafM SNP 0010.scaffold00043 128299 1 T C scaffold905 ScafM SNP 0010.scaffold00043 128317 1 T C scaffold905 ScafM SNP 0010.scaffold00043 128330 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 128335 1 A . scaffold905 ScafM SNP 0010.scaffold00043 128346 1 T C scaffold905 ScafM SNP 0010.scaffold00043 128409 2 TT CC scaffold905 ScafM SNP 0010.scaffold00043 128413 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128447 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 128475 1 T . scaffold905 ScafM SNP 0010.scaffold00043 128498 1 T C scaffold905 ScafM SNP 0010.scaffold00043 128500 1 G A scaffold905 ScafM SNP 0010.scaffold00043 128545 1 G T scaffold905 ScafM SNP 0010.scaffold00043 128576 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 128587 6 AGTTTG ...... scaffold905 ScafM INDEL 0010.scaffold00043 128594 1 A . scaffold905 ScafM SNP 0010.scaffold00043 128602 1 T G scaffold905 ScafM SNP 0010.scaffold00043 128627 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128650 1 A G scaffold905 ScafM SNP 0010.scaffold00043 128687 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128690 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128715 1 G A scaffold905 ScafM SNP 0010.scaffold00043 128725 2 TT CC scaffold905 ScafM SNP 0010.scaffold00043 128728 1 G T scaffold905 ScafM SNP 0010.scaffold00043 128731 1 A C scaffold905 ScafM SNP 0010.scaffold00043 128751 1 C T scaffold905 ScafM SNP 0010.scaffold00043 128753 1 A G scaffold905 ScafM SNP 0010.scaffold00043 128762 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 128927 2 TT .A scaffold905 ScafM SNP 0010.scaffold00043 128934 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 128951 4 .... TGAT scaffold905 ScafM INDEL 0010.scaffold00043 128983 1 . A scaffold905 ScafM SNP 0010.scaffold00043 129006 1 C A scaffold905 ScafM SNP 0010.scaffold00043 129015 1 A G scaffold905 ScafM SNP 0010.scaffold00043 129019 1 T G scaffold905 ScafM SNP 0010.scaffold00043 129023 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129031 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129074 1 A G scaffold905 ScafM SNP 0010.scaffold00043 129079 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129085 1 A T scaffold905 ScafM SNP 0010.scaffold00043 129104 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129119 1 A T scaffold905 ScafM SNP 0010.scaffold00043 129143 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129154 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129174 1 T G scaffold905 ScafM SNP 0010.scaffold00043 129183 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129197 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129202 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129204 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129248 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129254 1 G T scaffold905 ScafM SNP 0010.scaffold00043 129256 2 AG CA scaffold905 ScafM SNP 0010.scaffold00043 129261 2 TT CG scaffold905 ScafM SNP 0010.scaffold00043 129265 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129282 1 A G scaffold905 ScafM SNP 0010.scaffold00043 129288 1 T A scaffold905 ScafM SNP 0010.scaffold00043 129301 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129311 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129314 1 A T scaffold905 ScafM SNP 0010.scaffold00043 129327 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 129338 1 . C scaffold905 ScafM SNP 0010.scaffold00043 129346 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129364 1 A G scaffold905 ScafM SNP 0010.scaffold00043 129372 1 G A scaffold905 ScafM SNP 0010.scaffold00043 129379 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 129396 2 AA .. scaffold905 ScafM INDEL 0010.scaffold00043 129399 2 CC .. scaffold905 ScafM INDEL 0010.scaffold00043 129402 1 C . scaffold905 ScafM SNP 0010.scaffold00043 129406 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129409 1 G T scaffold905 ScafM SNP 0010.scaffold00043 129435 1 A G scaffold905 ScafM SNP 0010.scaffold00043 129442 1 G T scaffold905 ScafM SNP 0010.scaffold00043 129473 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129504 2 AC GT scaffold905 ScafM SNP 0010.scaffold00043 129513 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129521 2 GC AA scaffold905 ScafM SNP 0010.scaffold00043 129532 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129539 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129542 1 C T scaffold905 ScafM SNP 0010.scaffold00043 129570 1 T C scaffold905 ScafM SNP 0010.scaffold00043 129591 2 CC AT scaffold905 ScafM INDEL 0010.scaffold00043 130224 1 . T scaffold905 ScafM SNP 0010.scaffold00043 130231 1 G T scaffold905 ScafM SNP 0010.scaffold00043 130245 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 130252 3 ... AAT scaffold905 ScafM INDEL 0010.scaffold00043 130332 1 . T scaffold905 ScafM SNP 0010.scaffold00043 130338 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 130385 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 131807 1 T . scaffold905 ScafM SNP 0010.scaffold00043 131830 1 T G scaffold905 ScafM SNP 0010.scaffold00043 131837 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 131913 1 T . scaffold905 ScafM SNP 0010.scaffold00043 132009 1 T A scaffold905 ScafM SNP 0010.scaffold00043 132012 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 132022 7 ....... TCACTAA scaffold905 ScafM INDEL 0010.scaffold00043 132062 2 .. TC scaffold905 ScafM SNP 0010.scaffold00043 132064 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 132296 46 .............................................. TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTT scaffold905 ScafM SNP 0010.scaffold00043 132297 1 G T scaffold905 ScafM SNP 0010.scaffold00043 132312 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 132321 1 A . scaffold905 Both SNP 0010.scaffold00043 132359 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 132480 1 . T scaffold905 Both INDEL 0010.scaffold00043 132629 1 T . scaffold905 Both INDEL 0010.scaffold00043 132734 1 G . scaffold905 ScafM SNP 0010.scaffold00043 132751 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 132761 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 132929 2 .. TT scaffold905 ScafM SNP 0010.scaffold00043 132937 1 C G scaffold905 ScafM SNP 0010.scaffold00043 132955 1 G A scaffold905 ScafM SNP 0010.scaffold00043 132962 1 T A scaffold905 Both SNP 0010.scaffold00043 132996 1 T A scaffold905 Both SNP 0010.scaffold00043 133717 1 C T scaffold905 Both SNP 0010.scaffold00043 134003 1 C T scaffold905 Both SNP 0010.scaffold00043 134207 1 G A scaffold905 ScafM SNP 0010.scaffold00043 134269 1 C G scaffold905 Both SNP 0010.scaffold00043 134637 1 T G scaffold905 Both SNP 0010.scaffold00043 135187 1 T G scaffold905 ScafM SNP 0010.scaffold00043 135652 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 135739 2 TT .. scaffold905 Both SNP 0010.scaffold00043 135973 1 A G scaffold905 Both INDEL 0010.scaffold00043 136621 1 . T scaffold905 Both SNP 0010.scaffold00043 137092 1 T A scaffold905 Both SNP 0010.scaffold00043 137286 1 A G scaffold905 Both SNP 0010.scaffold00043 137912 1 G T scaffold905 Both SNP 0010.scaffold00043 138003 1 C T scaffold905 Both SNP 0010.scaffold00043 138349 1 T C scaffold905 Both SNP 0010.scaffold00043 138499 1 G C scaffold905 ScafM SNP 0010.scaffold00043 139752 1 T G scaffold905 ScafM SNP 0010.scaffold00043 140245 1 C T scaffold905 ReadM SNP 0010.scaffold00043 140484 1 C T - ReadM SNP 0010.scaffold00043 140665 1 C T - Both SNP 0010.scaffold00043 141222 1 C T scaffold905 Both SNP 0010.scaffold00043 141242 1 T C scaffold905 ScafM SNP 0010.scaffold00043 141438 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 141476 4 .... ATAC scaffold905 ScafM SNP 0010.scaffold00043 141503 1 C G scaffold905 Both SNP 0010.scaffold00043 141617 1 A C scaffold905 Both SNP 0010.scaffold00043 142157 1 C T scaffold905 Both SNP 0010.scaffold00043 142359 1 G T scaffold905 ReadM SNP 0010.scaffold00043 142686 1 T C - Both SNP 0010.scaffold00043 142981 1 C T scaffold905 Both INDEL 0010.scaffold00043 143184 3 TCC ... scaffold905 Both SNP 0010.scaffold00043 143341 1 T C scaffold905 Both SNP 0010.scaffold00043 143439 1 T C scaffold905 Both SNP 0010.scaffold00043 143872 1 T C scaffold905 Both SNP 0010.scaffold00043 144046 1 T A scaffold905 Both SNP 0010.scaffold00043 144784 1 A G scaffold905 Both SNP 0010.scaffold00043 144899 1 C T scaffold905 ScafM SNP 0010.scaffold00043 144906 1 A T scaffold905 Both SNP 0010.scaffold00043 145117 1 G A scaffold905 Both SNP 0010.scaffold00043 145368 1 A T scaffold905 Both SNP 0010.scaffold00043 145414 1 G C scaffold905 Both SNP 0010.scaffold00043 145579 1 A T scaffold905 Both SNP 0010.scaffold00043 145601 1 A T scaffold905 Both SNP 0010.scaffold00043 145634 1 A T scaffold905 Both SNP 0010.scaffold00043 145925 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 147055 4 TATT .... scaffold905 ScafM INDEL 0010.scaffold00043 147061 1 C . scaffold905 ScafM SNP 0010.scaffold00043 147070 1 C T scaffold905 ScafM SNP 0010.scaffold00043 147100 1 C A scaffold905 ScafM SNP 0010.scaffold00043 147132 1 C T scaffold905 ScafM SNP 0010.scaffold00043 147193 1 T C scaffold905 ScafM SNP 0010.scaffold00043 147344 1 T C scaffold905 ScafM SNP 0010.scaffold00043 147348 1 T C scaffold905 ScafM SNP 0010.scaffold00043 147353 1 G C scaffold905 ScafM INDEL 0010.scaffold00043 147355 1 . C scaffold905 ScafM SNP 0010.scaffold00043 147361 1 A T scaffold905 ScafM SNP 0010.scaffold00043 147414 1 T C scaffold905 ScafM SNP 0010.scaffold00043 147421 2 AC GG scaffold905 ScafM SNP 0010.scaffold00043 147509 2 AA GT scaffold905 Both SNP 0010.scaffold00043 147641 1 A G scaffold905 Both SNP 0010.scaffold00043 147677 1 C G scaffold905 ReadM SNP 0010.scaffold00043 147967 1 A G - ReadM SNP 0010.scaffold00043 148040 1 A C - ScafM SNP 0010.scaffold00043 148224 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 148227 1 G . scaffold905 ScafM SNP 0010.scaffold00043 148231 1 T C scaffold905 ScafM SNP 0010.scaffold00043 148236 1 A C scaffold905 ReadM SNP 0010.scaffold00043 148365 1 G T - ReadM SNP 0010.scaffold00043 148369 1 T C - ReadM SNP 0010.scaffold00043 148496 1 G A - Both INDEL 0010.scaffold00043 148747 1 A . scaffold905 ReadM SNP 0010.scaffold00043 149069 1 T C - ReadM SNP 0010.scaffold00043 149244 1 T C - ReadM SNP 0010.scaffold00043 149329 1 A G - ReadM INDEL 0010.scaffold00043 149351 1 . T - Both SNP 0010.scaffold00043 149435 1 C G scaffold905 Both SNP 0010.scaffold00043 149460 1 T A scaffold905 ScafM SNP 0010.scaffold00043 149485 1 G T scaffold905 ScafM SNP 0010.scaffold00043 149502 1 C T scaffold905 ScafM SNP 0010.scaffold00043 149578 1 A C scaffold905 Both SNP 0010.scaffold00043 149604 1 A G scaffold905 Both INDEL 0010.scaffold00043 149616 1 A . scaffold905 Both SNP 0010.scaffold00043 149685 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 149702 1 T . scaffold905 ScafM SNP 0010.scaffold00043 149705 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 149739 3 ... TAA scaffold905 ScafM SNP 0010.scaffold00043 149797 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 149808 7 TTTTTTT ....... scaffold905 ScafM SNP 0010.scaffold00043 149842 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 149854 1 . T scaffold905 ScafM SNP 0010.scaffold00043 149866 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 149894 1 A . scaffold905 ScafM SNP 0010.scaffold00043 149992 1 A T scaffold905 ScafM SNP 0010.scaffold00043 150048 1 G C scaffold905 Both SNP 0010.scaffold00043 150777 1 T C scaffold905 Both SNP 0010.scaffold00043 150804 1 T G scaffold905 Both INDEL 0010.scaffold00043 150862 1 . A scaffold905 ReadM SNP 0010.scaffold00043 151456 1 G A - ReadM SNP 0010.scaffold00043 151622 1 T C - ReadM SNP 0010.scaffold00043 151636 1 C G - ReadM SNP 0010.scaffold00043 152124 1 T G - ReadM SNP 0010.scaffold00043 152346 1 A G - ScafM SNP 0010.scaffold00043 152500 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 152540 1 . A scaffold905 ScafM SNP 0010.scaffold00043 152542 1 T A scaffold905 Both SNP 0010.scaffold00043 152716 1 T C scaffold905 Both SNP 0010.scaffold00043 152748 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 152948 2 AA .. scaffold905 ReadM SNP 0010.scaffold00043 153320 1 C T - ReadM SNP 0010.scaffold00043 153395 1 G A - ReadM SNP 0010.scaffold00043 153552 1 A T - ReadM SNP 0010.scaffold00043 153562 1 A G - ScafM INDEL 0010.scaffold00043 153831 8 ........ GTCTAATC scaffold905 ScafM SNP 0010.scaffold00043 154021 2 GG AT scaffold905 ScafM INDEL 0010.scaffold00043 154023 5 ..... TCTTC scaffold905 ScafM SNP 0010.scaffold00043 154025 2 AA TT scaffold905 ScafM INDEL 0010.scaffold00043 154027 1 . C scaffold905 ScafM INDEL 0010.scaffold00043 154028 1 . A scaffold905 ScafM SNP 0010.scaffold00043 154031 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 154032 1 . C scaffold905 ScafM INDEL 0010.scaffold00043 154033 1 . T scaffold905 ScafM SNP 0010.scaffold00043 154035 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 154037 5 .GCCC TAATT scaffold905 ScafM SNP 0010.scaffold00043 154303 1 G C scaffold905 ScafM SNP 0010.scaffold00043 154322 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 154982 3 ACA ... scaffold905 ScafM SNP 0010.scaffold00043 155009 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 155155 2 AA .. scaffold905 ScafM SNP 0010.scaffold00043 155158 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 155177 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 155219 6 AGAGAC ...... scaffold905 ScafM SNP 0010.scaffold00043 155226 1 C T scaffold905 ReadM SNP 0010.scaffold00043 155407 1 T A - ReadM SNP 0010.scaffold00043 155418 1 C T - ScafM SNP 0010.scaffold00043 155602 1 T C scaffold905 ScafM SNP 0010.scaffold00043 155616 1 T G scaffold905 ScafM SNP 0010.scaffold00043 155623 1 A G scaffold905 ScafM SNP 0010.scaffold00043 155715 1 G A scaffold905 ScafM SNP 0010.scaffold00043 155808 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 156056 1 . T scaffold905 ScafM SNP 0010.scaffold00043 156071 1 T A scaffold905 ScafM SNP 0010.scaffold00043 156189 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 156651 1 T . scaffold905 ReadM SNP 0010.scaffold00043 156928 1 G A - Both SNP 0010.scaffold00043 157054 1 T C scaffold905 Both SNP 0010.scaffold00043 157171 1 A G scaffold905 Both SNP 0010.scaffold00043 157177 1 G A scaffold905 ReadM SNP 0010.scaffold00043 157263 1 G A - ReadM SNP 0010.scaffold00043 157284 1 T A - ReadM SNP 0010.scaffold00043 157300 1 G T - ReadM SNP 0010.scaffold00043 157350 1 T C - ReadM SNP 0010.scaffold00043 157399 1 C T - ReadM SNP 0010.scaffold00043 157431 1 G A - Both SNP 0010.scaffold00043 157708 1 C A scaffold905 Both INDEL 0010.scaffold00043 157900 2 TT .. scaffold905 Both SNP 0010.scaffold00043 157952 1 T C scaffold905 ScafM SNP 0010.scaffold00043 158041 1 G A scaffold905 ScafM SNP 0010.scaffold00043 158383 1 G A scaffold905 Both SNP 0010.scaffold00043 158460 1 T A scaffold905 ScafM SNP 0010.scaffold00043 158475 1 T C scaffold905 ScafM SNP 0010.scaffold00043 158965 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 158998 5 ..... AACAA scaffold905 ScafM SNP 0010.scaffold00043 159027 1 T C scaffold905 ScafM SNP 0010.scaffold00043 159038 1 T A scaffold905 ScafM SNP 0010.scaffold00043 159044 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 159254 22 ACGATATTAATTGTAAACCATA ...................... scaffold905 ScafM SNP 0010.scaffold00043 159407 1 T A scaffold905 ReadM SNP 0010.scaffold00043 159473 1 C G - ScafM INDEL 0010.scaffold00043 159588 1 T . scaffold905 ScafM SNP 0010.scaffold00043 159593 1 C T scaffold905 ScafM SNP 0010.scaffold00043 159603 2 GG AA scaffold905 ScafM SNP 0010.scaffold00043 159635 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 159641 1 T . scaffold905 ScafM SNP 0010.scaffold00043 159970 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 159996 2 CA .T scaffold905 ScafM SNP 0010.scaffold00043 159999 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 160074 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 160081 1 . A scaffold905 ScafM SNP 0010.scaffold00043 160112 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 160290 2 AA .G scaffold905 Both SNP 0010.scaffold00043 160434 1 A C scaffold905 Both SNP 0010.scaffold00043 160444 1 C A scaffold905 Both SNP 0010.scaffold00043 160481 1 G A scaffold905 Both SNP 0010.scaffold00043 162433 1 A C scaffold905 Both SNP 0010.scaffold00043 162609 1 T C scaffold905 ScafM SNP 0010.scaffold00043 164103 1 A G scaffold905 ScafM SNP 0010.scaffold00043 165752 1 T C scaffold905 ScafM SNP 0010.scaffold00043 165758 1 G A scaffold905 ScafM SNP 0010.scaffold00043 165820 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 167340 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 168173 48 ................................................ CATATGTAGCTCATCAAACATCTTCCTCAAATTTAACAATCATATTAT scaffold905 ReadM SNP 0010.scaffold00043 168426 1 A T - ReadM SNP 0010.scaffold00043 169735 1 A C - Both SNP 0010.scaffold00043 169800 1 A T scaffold905 ScafM SNP 0010.scaffold00043 169920 2 AG GC scaffold905 ScafM INDEL 0010.scaffold00043 169922 1 . C scaffold905 ScafM SNP 0010.scaffold00043 169924 1 G A scaffold905 Both SNP 0010.scaffold00043 170160 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 170283 36 ATTTTTTTTTCTTCCAAAACACAATACAAAAATAAT .................................... scaffold905 Both SNP 0010.scaffold00043 170355 1 C T scaffold905 Both SNP 0010.scaffold00043 170394 1 T C scaffold905 Both SNP 0010.scaffold00043 170587 1 T C scaffold905 Both SNP 0010.scaffold00043 170716 1 T C scaffold905 ScafM SNP 0010.scaffold00043 170750 1 C A scaffold905 ScafM SNP 0010.scaffold00043 170753 2 TT CC scaffold905 ScafM INDEL 0010.scaffold00043 170760 4 .... AAAA scaffold905 ScafM SNP 0010.scaffold00043 170766 1 T C scaffold905 ScafM SNP 0010.scaffold00043 170775 1 C T scaffold905 ScafM SNP 0010.scaffold00043 170783 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 170789 1 A . scaffold905 ScafM SNP 0010.scaffold00043 170805 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 170808 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 170811 1 C . scaffold905 ScafM SNP 0010.scaffold00043 170845 2 AC GT scaffold905 ScafM INDEL 0010.scaffold00043 170850 1 A . scaffold905 ScafM SNP 0010.scaffold00043 170858 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 170884 3 ... AAA scaffold905 ScafM SNP 0010.scaffold00043 170886 1 G A scaffold905 ScafM SNP 0010.scaffold00043 170909 2 AG CT scaffold905 ScafM SNP 0010.scaffold00043 170915 2 AG TT scaffold905 ScafM SNP 0010.scaffold00043 170928 1 A C scaffold905 ScafM SNP 0010.scaffold00043 170948 1 T C scaffold905 ReadM SNP 0010.scaffold00043 171118 1 A G - ReadM SNP 0010.scaffold00043 171174 1 T G - ReadM SNP 0010.scaffold00043 171210 1 A G - ReadM SNP 0010.scaffold00043 171372 1 T C - ReadM INDEL 0010.scaffold00043 171386 1 C . - ReadM SNP 0010.scaffold00043 171439 1 T C - ReadM SNP 0010.scaffold00043 171560 1 A G - ReadM SNP 0010.scaffold00043 171565 1 G T - ReadM SNP 0010.scaffold00043 171776 1 G T - ReadM SNP 0010.scaffold00043 171862 1 C T - ReadM SNP 0010.scaffold00043 171869 1 A T - ReadM SNP 0010.scaffold00043 172091 1 A G - ReadM INDEL 0010.scaffold00043 172161 1 . A - ReadM SNP 0010.scaffold00043 172202 1 A T - ReadM SNP 0010.scaffold00043 172357 1 C T - ReadM SNP 0010.scaffold00043 172385 1 T G - ReadM SNP 0010.scaffold00043 172410 1 T A - ReadM SNP 0010.scaffold00043 172412 1 T C - ReadM SNP 0010.scaffold00043 172478 1 A G - ReadM SNP 0010.scaffold00043 172516 1 T A - ReadM SNP 0010.scaffold00043 172623 1 A T - ReadM INDEL 0010.scaffold00043 172737 1 . A - ReadM SNP 0010.scaffold00043 172770 1 A C - ReadM SNP 0010.scaffold00043 172857 1 T C - ReadM INDEL 0010.scaffold00043 173018 1 . T - ReadM SNP 0010.scaffold00043 173068 1 C A - ReadM SNP 0010.scaffold00043 173681 1 A C - ReadM SNP 0010.scaffold00043 173722 1 T C - ReadM SNP 0010.scaffold00043 173739 1 C G - ReadM SNP 0010.scaffold00043 173757 1 T A - ReadM SNP 0010.scaffold00043 173793 1 T A - ReadM SNP 0010.scaffold00043 173875 1 A G - ReadM SNP 0010.scaffold00043 173931 1 A T - ReadM SNP 0010.scaffold00043 174065 1 G T - ReadM SNP 0010.scaffold00043 174072 1 A T - ReadM SNP 0010.scaffold00043 174131 1 A T - ReadM SNP 0010.scaffold00043 174156 1 T A - ReadM SNP 0010.scaffold00043 174278 1 A T - ReadM SNP 0010.scaffold00043 174282 1 C G - ReadM SNP 0010.scaffold00043 174290 1 C T - ReadM SNP 0010.scaffold00043 174317 1 C T - ReadM SNP 0010.scaffold00043 174322 1 A G - ReadM SNP 0010.scaffold00043 174450 1 C T - ReadM SNP 0010.scaffold00043 174514 1 G A - ReadM SNP 0010.scaffold00043 174527 1 G A - ReadM SNP 0010.scaffold00043 174573 1 G A - ReadM SNP 0010.scaffold00043 174706 1 A G - ReadM SNP 0010.scaffold00043 174726 1 G A - ReadM SNP 0010.scaffold00043 174992 1 G A - ReadM SNP 0010.scaffold00043 174997 1 A T - ReadM SNP 0010.scaffold00043 175034 1 A T - ReadM SNP 0010.scaffold00043 175193 1 T A - ReadM SNP 0010.scaffold00043 175199 1 C T - ReadM SNP 0010.scaffold00043 175278 1 G A - ReadM SNP 0010.scaffold00043 175377 1 T C - ReadM SNP 0010.scaffold00043 175745 1 G T - ReadM SNP 0010.scaffold00043 175777 1 T G - ReadM SNP 0010.scaffold00043 175851 1 C T - ReadM INDEL 0010.scaffold00043 175914 1 . T - ScafM SNP 0010.scaffold00043 176872 1 C T scaffold905 ScafM SNP 0010.scaffold00043 176879 2 TC AT scaffold905 Both INDEL 0010.scaffold00043 176919 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 177081 1 T . scaffold905 ScafM SNP 0010.scaffold00043 177091 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 177092 2 .. CG scaffold905 ScafM SNP 0010.scaffold00043 177108 1 G A scaffold905 ScafM SNP 0010.scaffold00043 177119 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 177132 2 AG .. scaffold905 ScafM SNP 0010.scaffold00043 177172 1 C T scaffold905 ScafM SNP 0010.scaffold00043 177227 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 177228 1 . G scaffold905 ScafM SNP 0010.scaffold00043 177233 1 C T scaffold905 ScafM SNP 0010.scaffold00043 177241 1 T A scaffold905 ScafM SNP 0010.scaffold00043 177245 1 C G scaffold905 ScafM SNP 0010.scaffold00043 177249 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 177266 3 ... TAT scaffold905 ScafM INDEL 0010.scaffold00043 177270 3 ... GTG scaffold905 ScafM INDEL 0010.scaffold00043 177272 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 177274 24 ........................ TTCTTGTTAATATACTTTTACCCT scaffold905 ScafM INDEL 0010.scaffold00043 177277 2 .. CA scaffold905 ScafM SNP 0010.scaffold00043 177286 1 T C scaffold905 ScafM SNP 0010.scaffold00043 177318 1 G T scaffold905 ScafM SNP 0010.scaffold00043 177338 1 G C scaffold905 ScafM SNP 0010.scaffold00043 177342 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 177353 2 TG .. scaffold905 ScafM SNP 0010.scaffold00043 177356 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 177371 1 T . scaffold905 ScafM SNP 0010.scaffold00043 177375 1 T C scaffold905 ScafM SNP 0010.scaffold00043 177379 1 C T scaffold905 ScafM SNP 0010.scaffold00043 177402 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 178311 4 .... ATTA scaffold905 ScafM SNP 0010.scaffold00043 178318 1 A T scaffold905 ScafM SNP 0010.scaffold00043 178354 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 178368 3 AGC ... scaffold905 ScafM SNP 0010.scaffold00043 178380 1 T C scaffold905 ScafM SNP 0010.scaffold00043 178387 1 A G scaffold905 Both SNP 0010.scaffold00043 178962 1 G A scaffold905 ScafM SNP 0010.scaffold00043 179012 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 179044 4 .... AACA scaffold905 ScafM INDEL 0010.scaffold00043 179046 2 .. AA scaffold905 ScafM INDEL 0010.scaffold00043 179058 2 TT .. scaffold905 ScafM SNP 0010.scaffold00043 179063 1 T C scaffold905 ScafM SNP 0010.scaffold00043 179091 1 A G scaffold905 ScafM SNP 0010.scaffold00043 179116 1 C T scaffold905 Both SNP 0010.scaffold00043 179128 1 A T scaffold905 Both SNP 0010.scaffold00043 179171 1 A C scaffold905 Both SNP 0010.scaffold00043 179270 1 A G scaffold905 Both SNP 0010.scaffold00043 179282 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 179446 9 ......... GACGACGAC scaffold905 ScafM SNP 0010.scaffold00043 179680 1 G A scaffold905 ScafM SNP 0010.scaffold00043 179710 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 179744 1 . C scaffold905 ScafM SNP 0010.scaffold00043 180840 1 A G scaffold905 ScafM SNP 0010.scaffold00043 180843 1 C A scaffold905 ScafM SNP 0010.scaffold00043 180862 1 T C scaffold905 ScafM SNP 0010.scaffold00043 180870 1 T G scaffold905 ScafM SNP 0010.scaffold00043 180886 1 C T scaffold905 ScafM SNP 0010.scaffold00043 180894 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 180903 2 .. GA scaffold905 ScafM SNP 0010.scaffold00043 180905 1 A T scaffold905 ScafM SNP 0010.scaffold00043 180907 2 GC AT scaffold905 ScafM SNP 0010.scaffold00043 180919 1 A G scaffold905 ScafM SNP 0010.scaffold00043 180922 1 A G scaffold905 ScafM SNP 0010.scaffold00043 180944 1 G A scaffold905 ScafM SNP 0010.scaffold00043 180946 1 C A scaffold905 ScafM SNP 0010.scaffold00043 181056 1 G A scaffold905 ScafM SNP 0010.scaffold00043 181059 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 181071 4 TTAG .... scaffold905 ScafM INDEL 0010.scaffold00043 181120 11 GGAAAGGGGAA ........... scaffold905 ScafM INDEL 0010.scaffold00043 181132 3 GGG ... scaffold905 ScafM SNP 0010.scaffold00043 181272 1 T C scaffold905 ScafM SNP 0010.scaffold00043 181278 1 T C scaffold905 ReadM SNP 0010.scaffold00043 181889 1 T C - ReadM SNP 0010.scaffold00043 181918 1 A G - ReadM SNP 0010.scaffold00043 181936 1 C A - ReadM SNP 0010.scaffold00043 181972 1 A G - Both SNP 0010.scaffold00043 182379 1 A G scaffold905 ScafM SNP 0010.scaffold00043 182867 1 A G scaffold905 ScafM SNP 0010.scaffold00043 182869 1 G A scaffold905 ScafM SNP 0010.scaffold00043 182905 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 183396 21 ..................... CCCCCCCAAAAAAGTTTTTCC scaffold905 ScafM INDEL 0010.scaffold00043 183482 1 . T scaffold905 ScafM SNP 0010.scaffold00043 183592 1 T G scaffold905 ScafM SNP 0010.scaffold00043 183828 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 183840 8 ........ CCTAAAGT scaffold905 ScafM SNP 0010.scaffold00043 183974 1 G A scaffold905 ScafM SNP 0010.scaffold00043 184030 1 G A scaffold905 ScafM SNP 0010.scaffold00043 184036 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 184045 3 TAT ... scaffold905 ScafM SNP 0010.scaffold00043 184056 1 G A scaffold905 ScafM SNP 0010.scaffold00043 184076 1 C T scaffold905 ScafM SNP 0010.scaffold00043 184078 1 C A scaffold905 ScafM SNP 0010.scaffold00043 184102 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 184109 1 A . scaffold905 ScafM SNP 0010.scaffold00043 184122 1 A T scaffold905 ScafM SNP 0010.scaffold00043 184140 1 G T scaffold905 ScafM SNP 0010.scaffold00043 184144 1 G A scaffold905 ScafM SNP 0010.scaffold00043 184907 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 184916 1 . A scaffold905 ScafM SNP 0010.scaffold00043 184938 1 C T scaffold905 ScafM SNP 0010.scaffold00043 184940 1 A C scaffold905 ScafM SNP 0010.scaffold00043 184943 1 C T scaffold905 ScafM SNP 0010.scaffold00043 184953 1 A T scaffold905 ScafM SNP 0010.scaffold00043 184958 1 C T scaffold905 ScafM SNP 0010.scaffold00043 184988 1 G C scaffold905 ScafM SNP 0010.scaffold00043 185007 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 185010 3 ... AAA scaffold905 ScafM SNP 0010.scaffold00043 185024 1 G A scaffold905 Both INDEL 0010.scaffold00043 185197 3 TAT ... scaffold905 Both SNP 0010.scaffold00043 185280 1 T C scaffold905 Both SNP 0010.scaffold00043 185515 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 185901 4 .... TTTA scaffold905 ScafM INDEL 0010.scaffold00043 185903 6 ...... TGTATA scaffold905 ScafM SNP 0010.scaffold00043 185904 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 185906 4 .... GTCC scaffold905 ScafM INDEL 0010.scaffold00043 185947 9 CATAACACC ......... scaffold905 ScafM INDEL 0010.scaffold00043 185958 15 CCCACTTCATTTTCT ............... scaffold905 ScafM SNP 0010.scaffold00043 185976 1 A G scaffold905 ScafM SNP 0010.scaffold00043 185986 1 T C scaffold905 ScafM SNP 0010.scaffold00043 185993 1 A C scaffold905 ScafM SNP 0010.scaffold00043 185996 1 A G scaffold905 ScafM SNP 0010.scaffold00043 186001 1 A G scaffold905 ScafM SNP 0010.scaffold00043 186017 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 186025 5 ..... AAATT scaffold905 ScafM INDEL 0010.scaffold00043 186044 4 .... TAAT scaffold905 ScafM SNP 0010.scaffold00043 186063 1 G C scaffold905 ScafM SNP 0010.scaffold00043 186093 1 A G scaffold905 ScafM SNP 0010.scaffold00043 186100 1 A G scaffold905 ScafM SNP 0010.scaffold00043 186752 1 G A scaffold905 ScafM SNP 0010.scaffold00043 186754 1 G A scaffold905 ScafM SNP 0010.scaffold00043 186768 1 T A scaffold905 ScafM SNP 0010.scaffold00043 186803 1 A T scaffold905 ScafM SNP 0010.scaffold00043 186807 1 C T scaffold905 ScafM SNP 0010.scaffold00043 186850 1 G A scaffold905 Both SNP 0010.scaffold00043 186884 1 G A scaffold905 ScafM SNP 0010.scaffold00043 186963 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 186986 1 C . scaffold905 ScafM INDEL 0010.scaffold00043 187007 34 ATCTTTCAAAAAAAAAAAAAAACTATCCAATTGA .................................. scaffold905 ScafM SNP 0010.scaffold00043 187051 1 G A scaffold905 ScafM SNP 0010.scaffold00043 187060 1 A T scaffold905 ScafM SNP 0010.scaffold00043 187090 1 A G scaffold905 ReadM SNP 0010.scaffold00043 188830 1 C A - ReadM INDEL 0010.scaffold00043 189004 2 AA .. - ReadM SNP 0010.scaffold00043 189238 1 C T - ScafM SNP 0010.scaffold00043 190574 1 C T scaffold1595 ScafM SNP 0010.scaffold00043 190583 1 A G scaffold1595 ScafM SNP 0010.scaffold00043 190594 1 G A scaffold1595 ScafM INDEL 0010.scaffold00043 190626 1 A . scaffold1595 ScafM SNP 0010.scaffold00043 190636 1 C A scaffold1595 ScafM SNP 0010.scaffold00043 190679 1 C A scaffold1595 ScafM SNP 0010.scaffold00043 190737 1 G T scaffold1595 ScafM SNP 0010.scaffold00043 190822 1 G A scaffold1595 ScafM SNP 0010.scaffold00043 190872 1 C G scaffold1595 ScafM INDEL 0010.scaffold00043 190920 1 . T scaffold1595 ScafM SNP 0010.scaffold00043 190926 2 CA AT scaffold1595 ScafM SNP 0010.scaffold00043 190963 1 A C scaffold1595 ScafM SNP 0010.scaffold00043 190982 1 G T scaffold1595 ScafM SNP 0010.scaffold00043 191038 1 A G scaffold1595 ScafM SNP 0010.scaffold00043 191104 1 G A scaffold1595 ScafM INDEL 0010.scaffold00043 191114 2 CT .. scaffold1595 ScafM SNP 0010.scaffold00043 191129 1 T G scaffold1595 ScafM SNP 0010.scaffold00043 191149 1 G A scaffold1595 ScafM SNP 0010.scaffold00043 191166 1 T C scaffold1595 ScafM INDEL 0010.scaffold00043 191209 4 .... AATG scaffold1595 ScafM INDEL 0010.scaffold00043 191211 1 . C scaffold1595 ScafM INDEL 0010.scaffold00043 191212 2 .. CA scaffold1595 ScafM SNP 0010.scaffold00043 191219 1 T G scaffold1595 ScafM INDEL 0010.scaffold00043 191243 2 .. GA scaffold1595 ScafM SNP 0010.scaffold00043 191253 1 A G scaffold1595 ScafM SNP 0010.scaffold00043 191261 1 T G scaffold1595 ScafM SNP 0010.scaffold00043 203442 1 T C scaffold905 ScafM SNP 0010.scaffold00043 203450 1 C G scaffold905 ScafM SNP 0010.scaffold00043 205886 1 G A scaffold905 ScafM SNP 0010.scaffold00043 205889 1 A T scaffold905 ScafM SNP 0010.scaffold00043 205987 2 AT CC scaffold905 ScafM SNP 0010.scaffold00043 206002 1 T C scaffold905 ScafM SNP 0010.scaffold00043 206052 1 G A scaffold905 ScafM SNP 0010.scaffold00043 206194 1 T C scaffold905 Both SNP 0010.scaffold00043 206359 1 A G scaffold905 ScafM SNP 0010.scaffold00043 206390 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 206419 4 .... AGAT scaffold905 ScafM SNP 0010.scaffold00043 206422 1 G A scaffold905 ScafM SNP 0010.scaffold00043 206886 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 206896 3 ... TAT scaffold905 ScafM INDEL 0010.scaffold00043 206897 1 . T scaffold905 ScafM SNP 0010.scaffold00043 206915 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 206927 2 .. AT scaffold905 ScafM SNP 0010.scaffold00043 207001 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 207008 4 TTAG .... scaffold905 ScafM SNP 0010.scaffold00043 207016 1 C T scaffold905 ScafM SNP 0010.scaffold00043 207021 1 T G scaffold905 ScafM SNP 0010.scaffold00043 207156 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 207165 1 . G scaffold905 ScafM INDEL 0010.scaffold00043 207167 4 .... AAAA scaffold905 ScafM INDEL 0010.scaffold00043 207168 5 ..... GCGGA scaffold905 ScafM INDEL 0010.scaffold00043 207197 4 .... CTAG scaffold905 ScafM SNP 0010.scaffold00043 207380 1 G A scaffold905 ScafM SNP 0010.scaffold00043 208882 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 208911 1 G . scaffold905 ScafM SNP 0010.scaffold00043 208934 1 A T scaffold905 ScafM SNP 0010.scaffold00043 208953 1 G C scaffold905 ScafM SNP 0010.scaffold00043 208986 1 G T scaffold905 ScafM SNP 0010.scaffold00043 208989 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 209020 4 .... ATAT scaffold905 ScafM SNP 0010.scaffold00043 209045 1 A G scaffold905 ScafM SNP 0010.scaffold00043 209078 1 T C scaffold905 ScafM SNP 0010.scaffold00043 209096 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 209114 2 GC .. scaffold905 ScafM INDEL 0010.scaffold00043 209119 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 209121 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 209124 3 AGA ... scaffold905 ScafM SNP 0010.scaffold00043 209144 1 T A scaffold905 ScafM SNP 0010.scaffold00043 209163 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 209204 1 A . scaffold905 Both INDEL 0010.scaffold00043 209245 2 CC .. scaffold905 ReadM SNP 0010.scaffold00043 209362 1 A G - ReadM SNP 0010.scaffold00043 209376 1 A G - ScafM SNP 0010.scaffold00043 209405 1 T A scaffold905 ScafM SNP 0010.scaffold00043 209415 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 209416 1 . A scaffold905 ScafM SNP 0010.scaffold00043 209447 1 G A scaffold905 ScafM SNP 0010.scaffold00043 209491 1 C G scaffold905 ScafM SNP 0010.scaffold00043 209498 1 T C scaffold905 ScafM SNP 0010.scaffold00043 209552 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 209561 1 . T scaffold905 ScafM SNP 0010.scaffold00043 209570 1 C G scaffold905 ScafM SNP 0010.scaffold00043 209600 1 T C scaffold905 ScafM SNP 0010.scaffold00043 209639 1 G A scaffold905 ScafM SNP 0010.scaffold00043 209647 1 T C scaffold905 ScafM SNP 0010.scaffold00043 209665 1 A G scaffold905 Both SNP 0010.scaffold00043 209695 1 T C scaffold905 Both INDEL 0010.scaffold00043 209736 1 . A scaffold905 Both SNP 0010.scaffold00043 209782 1 T C scaffold905 Both SNP 0010.scaffold00043 209798 1 A G scaffold905 Both SNP 0010.scaffold00043 209853 1 A T scaffold905 Both SNP 0010.scaffold00043 209896 1 C T scaffold905 Both SNP 0010.scaffold00043 209902 1 T C scaffold905 ScafM SNP 0010.scaffold00043 209943 1 A G scaffold905 ScafM SNP 0010.scaffold00043 209946 1 C T scaffold905 ScafM SNP 0010.scaffold00043 209962 1 C A scaffold905 ScafM SNP 0010.scaffold00043 209969 1 T C scaffold905 ScafM SNP 0010.scaffold00043 210005 1 A G scaffold905 ScafM SNP 0010.scaffold00043 210045 1 C G scaffold905 ScafM SNP 0010.scaffold00043 210066 1 C T scaffold905 ScafM SNP 0010.scaffold00043 210068 1 G A scaffold905 Both SNP 0010.scaffold00043 210079 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 210182 5 TCCGG ..... scaffold905 ScafM INDEL 0010.scaffold00043 210215 1 . G scaffold905 ScafM SNP 0010.scaffold00043 210220 1 T A scaffold905 ScafM SNP 0010.scaffold00043 210297 1 A C scaffold905 ScafM SNP 0010.scaffold00043 210327 1 A C scaffold905 ScafM SNP 0010.scaffold00043 210348 1 A G scaffold905 ScafM SNP 0010.scaffold00043 210435 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 212080 3 AAA ... scaffold905 ScafM SNP 0010.scaffold00043 212219 1 G T scaffold905 ScafM SNP 0010.scaffold00043 212550 1 A G scaffold905 ScafM SNP 0010.scaffold00043 212571 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 212597 1 . G scaffold905 ScafM INDEL 0010.scaffold00043 212697 1 A . scaffold905 ReadM SNP 0010.scaffold00043 213097 1 G A - ReadM SNP 0010.scaffold00043 213131 1 C G - ReadM SNP 0010.scaffold00043 213174 1 A T - ReadM SNP 0010.scaffold00043 213226 1 G A - ReadM SNP 0010.scaffold00043 213430 1 T G - ReadM SNP 0010.scaffold00043 213454 1 A G - ScafM INDEL 0010.scaffold00043 213572 4 CTTC ...A scaffold905 ScafM SNP 0010.scaffold00043 213917 1 C A scaffold905 Both SNP 0010.scaffold00043 214117 1 C G scaffold905 Both SNP 0010.scaffold00043 214180 1 A G scaffold905 Both SNP 0010.scaffold00043 214232 1 C T scaffold905 Both SNP 0010.scaffold00043 214272 1 G A scaffold905 Both INDEL 0010.scaffold00043 214304 1 A . scaffold905 ScafM SNP 0010.scaffold00043 214350 1 G A scaffold905 ReadM SNP 0010.scaffold00043 214661 1 A G - ScafM INDEL 0010.scaffold00043 214752 1 C . scaffold905 ReadM SNP 0010.scaffold00043 214863 1 T C - ReadM SNP 0010.scaffold00043 214893 1 T C - Both SNP 0010.scaffold00043 214992 1 C T scaffold905 Both SNP 0010.scaffold00043 215041 1 A G scaffold905 Both SNP 0010.scaffold00043 215313 1 A T scaffold905 ReadM SNP 0010.scaffold00043 215595 1 T A - ReadM SNP 0010.scaffold00043 215723 1 C T - ReadM SNP 0010.scaffold00043 215738 1 A G - ReadM SNP 0010.scaffold00043 215772 1 G A - ReadM SNP 0010.scaffold00043 215794 1 G A - ReadM SNP 0010.scaffold00043 215817 1 G A - ReadM SNP 0010.scaffold00043 215857 1 G A - ReadM SNP 0010.scaffold00043 215915 1 T C - ReadM SNP 0010.scaffold00043 215921 1 A G - ReadM SNP 0010.scaffold00043 216008 1 G A - Both SNP 0010.scaffold00043 216048 1 A G scaffold905 Both SNP 0010.scaffold00043 216052 1 A G scaffold905 ScafM SNP 0010.scaffold00043 216095 1 G A scaffold905 ScafM SNP 0010.scaffold00043 216103 1 A G scaffold905 ScafM SNP 0010.scaffold00043 216106 1 C T scaffold905 ScafM SNP 0010.scaffold00043 216125 1 A G scaffold905 ReadM SNP 0010.scaffold00043 216168 1 G A - ReadM SNP 0010.scaffold00043 216195 1 C T - ReadM SNP 0010.scaffold00043 216240 1 T C - ReadM SNP 0010.scaffold00043 216261 1 A G - ReadM SNP 0010.scaffold00043 216296 1 G C - ReadM SNP 0010.scaffold00043 216338 1 T C - ScafM SNP 0010.scaffold00043 216494 1 A C scaffold905 ScafM SNP 0010.scaffold00043 216498 1 C T scaffold905 ScafM SNP 0010.scaffold00043 216522 1 C G scaffold905 ScafM SNP 0010.scaffold00043 216536 1 G A scaffold905 ScafM SNP 0010.scaffold00043 216549 1 T G scaffold905 ScafM SNP 0010.scaffold00043 216551 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 216571 3 ATT ... scaffold905 ScafM SNP 0010.scaffold00043 216625 1 C G scaffold905 ScafM SNP 0010.scaffold00043 216643 1 G A scaffold905 ScafM SNP 0010.scaffold00043 216663 1 C T scaffold905 ScafM SNP 0010.scaffold00043 216699 1 G A scaffold905 ScafM SNP 0010.scaffold00043 216704 1 C A scaffold905 Both SNP 0010.scaffold00043 216738 1 C A scaffold905 Both SNP 0010.scaffold00043 216742 1 A T scaffold905 Both SNP 0010.scaffold00043 216790 1 C A scaffold905 Both INDEL 0010.scaffold00043 216899 2 .. AT scaffold905 Both SNP 0010.scaffold00043 216938 1 A G scaffold905 Both SNP 0010.scaffold00043 216955 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 217070 5 ..... TAAAT scaffold905 ScafM SNP 0010.scaffold00043 217083 1 C T scaffold905 ReadM SNP 0010.scaffold00043 217714 1 T C - ReadM SNP 0010.scaffold00043 217873 1 A T - ReadM SNP 0010.scaffold00043 217903 1 C T - ReadM INDEL 0010.scaffold00043 217917 1 G . - ReadM SNP 0010.scaffold00043 218042 1 C T - ReadM SNP 0010.scaffold00043 218135 1 T C - ReadM SNP 0010.scaffold00043 218142 1 G A - ReadM SNP 0010.scaffold00043 218252 1 G T - ScafM SNP 0010.scaffold00043 218902 1 G T scaffold905 ScafM SNP 0010.scaffold00043 218904 1 A G scaffold905 ScafM SNP 0010.scaffold00043 218914 1 G A scaffold905 ScafM SNP 0010.scaffold00043 218916 1 G T scaffold905 ScafM SNP 0010.scaffold00043 218940 1 A C scaffold905 ReadM SNP 0010.scaffold00043 219723 1 A C - ReadM SNP 0010.scaffold00043 219776 1 T G - ReadM SNP 0010.scaffold00043 219801 1 T A - ReadM SNP 0010.scaffold00043 219824 1 G A - ReadM SNP 0010.scaffold00043 219861 1 C T - ReadM SNP 0010.scaffold00043 219867 1 T C - ReadM SNP 0010.scaffold00043 219896 1 C A - ReadM SNP 0010.scaffold00043 220061 1 T C - ScafM INDEL 0010.scaffold00043 222497 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 241373 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 241378 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 241383 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 248767 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 248787 1 . T scaffold905 ReadM INDEL 0010.scaffold00043 255086 1 G . - ScafM INDEL 0010.scaffold00043 265276 6 ...... TTTTTT scaffold905 ScafM INDEL 0010.scaffold00043 265278 4 .... AAAT scaffold905 ScafM INDEL 0010.scaffold00043 265279 2 .. AA scaffold905 ScafM INDEL 0010.scaffold00043 265281 1 . A scaffold905 Both SNP 0010.scaffold00043 265502 1 C T scaffold905 Both SNP 0010.scaffold00043 265644 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 265647 2 AT .. scaffold905 ScafM INDEL 0010.scaffold00043 265730 1 A . scaffold905 ScafM SNP 0010.scaffold00043 265816 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 265881 8 TACTCATA ........ scaffold905 ReadM SNP 0010.scaffold00043 266516 1 C T - ScafM INDEL 0010.scaffold00043 266805 7 ACTATTT ....... scaffold905 ScafM INDEL 0010.scaffold00043 266984 10 TTTCTCTCTC .......... scaffold905 Both SNP 0010.scaffold00043 267105 1 A C scaffold905 ScafM SNP 0010.scaffold00043 267338 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 267348 8 ........ TTATATAA scaffold905 ScafM SNP 0010.scaffold00043 267388 1 C G scaffold905 ScafM SNP 0010.scaffold00043 267393 1 C T scaffold905 ScafM SNP 0010.scaffold00043 267410 1 T C scaffold905 ReadM SNP 0010.scaffold00043 268034 1 C T - Both SNP 0010.scaffold00043 268076 1 A G scaffold905 ReadM SNP 0010.scaffold00043 268116 1 A C - ScafM INDEL 0010.scaffold00043 268214 5 TGGCA ..... scaffold905 ScafM INDEL 0010.scaffold00043 268248 1 A . scaffold905 ScafM SNP 0010.scaffold00043 268263 1 T A scaffold905 ScafM SNP 0010.scaffold00043 268273 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 268285 7 TTCCAAA ....... scaffold905 ScafM SNP 0010.scaffold00043 268295 1 C G scaffold905 ScafM SNP 0010.scaffold00043 268299 1 A G scaffold905 ScafM SNP 0010.scaffold00043 268308 1 C T scaffold905 Both SNP 0010.scaffold00043 268354 1 C A scaffold905 Both SNP 0010.scaffold00043 268386 1 T G scaffold905 Both SNP 0010.scaffold00043 268430 1 G A scaffold905 Both SNP 0010.scaffold00043 269034 1 G A scaffold905 Both SNP 0010.scaffold00043 269043 1 T A scaffold905 Both SNP 0010.scaffold00043 269105 1 G A scaffold905 Both SNP 0010.scaffold00043 269146 1 G A scaffold905 Both SNP 0010.scaffold00043 269152 1 A G scaffold905 ReadM SNP 0010.scaffold00043 269254 1 G A - ReadM SNP 0010.scaffold00043 269270 1 G A - ReadM SNP 0010.scaffold00043 269296 1 A G - Both SNP 0010.scaffold00043 269530 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 269744 6 ...... TTTTTT scaffold905 ScafM SNP 0010.scaffold00043 269746 8 AAGCAAAC TTTTTTTT scaffold905 ScafM SNP 0010.scaffold00043 269756 1 A T scaffold905 ScafM SNP 0010.scaffold00043 269759 2 GA TT scaffold905 Both SNP 0010.scaffold00043 270024 1 T C scaffold905 Both SNP 0010.scaffold00043 270252 1 G T scaffold905 ScafM SNP 0010.scaffold00043 270485 2 GT CC scaffold905 ScafM INDEL 0010.scaffold00043 270490 1 . T scaffold905 Both SNP 0010.scaffold00043 270597 1 T A scaffold905 ReadM SNP 0010.scaffold00043 271014 1 C A - ReadM SNP 0010.scaffold00043 271066 1 A G - ReadM SNP 0010.scaffold00043 271233 1 C G - ReadM SNP 0010.scaffold00043 271265 1 C G - Both SNP 0010.scaffold00043 271369 1 A G scaffold905 ScafM SNP 0010.scaffold00043 271392 2 CT AC scaffold905 Both INDEL 0010.scaffold00043 271735 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 271785 24 ........................ ATAGGGTGCTCTATACACTGATCC scaffold905 Both SNP 0010.scaffold00043 271824 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 272047 8 TGACCATT ........ scaffold905 Both SNP 0010.scaffold00043 272285 1 G C scaffold905 Both SNP 0010.scaffold00043 272344 1 G A scaffold905 ReadM INDEL 0010.scaffold00043 272655 2 AT .. - ScafM SNP 0010.scaffold00043 273015 1 C T scaffold905 Both SNP 0010.scaffold00043 273584 1 C T scaffold905 Both SNP 0010.scaffold00043 273592 1 C T scaffold905 Both SNP 0010.scaffold00043 273600 1 T C scaffold905 Both SNP 0010.scaffold00043 273897 1 A G scaffold905 Both SNP 0010.scaffold00043 274089 1 C A scaffold905 Both SNP 0010.scaffold00043 274394 1 T A scaffold905 Both SNP 0010.scaffold00043 274512 1 C T scaffold905 Both SNP 0010.scaffold00043 274672 1 A G scaffold905 Both SNP 0010.scaffold00043 274691 1 C T scaffold905 Both SNP 0010.scaffold00043 274711 1 A G scaffold905 Both SNP 0010.scaffold00043 274747 1 A G scaffold905 Both SNP 0010.scaffold00043 274873 1 C G scaffold905 Both SNP 0010.scaffold00043 274894 1 C T scaffold905 Both SNP 0010.scaffold00043 274998 1 C T scaffold905 Both SNP 0010.scaffold00043 275005 1 G C scaffold905 Both SNP 0010.scaffold00043 275095 1 C T scaffold905 ReadM SNP 0010.scaffold00043 275319 1 A G - ReadM SNP 0010.scaffold00043 275341 1 C T - ReadM INDEL 0010.scaffold00043 275351 1 . A - ReadM SNP 0010.scaffold00043 275429 1 G A - ReadM SNP 0010.scaffold00043 275485 1 A C - ReadM SNP 0010.scaffold00043 275494 1 A G - ScafM SNP 0010.scaffold00043 276414 1 T A scaffold905 ScafM SNP 0010.scaffold00043 276450 1 T C scaffold905 ScafM SNP 0010.scaffold00043 276468 1 A G scaffold905 ScafM SNP 0010.scaffold00043 277429 1 T C scaffold905 ScafM SNP 0010.scaffold00043 277479 2 CT AA scaffold905 ScafM SNP 0010.scaffold00043 277482 1 T C scaffold905 ScafM SNP 0010.scaffold00043 277486 1 C T scaffold905 ScafM SNP 0010.scaffold00043 277547 1 G A scaffold905 ScafM SNP 0010.scaffold00043 277550 2 GT AC scaffold905 ScafM SNP 0010.scaffold00043 277553 1 G A scaffold905 ScafM SNP 0010.scaffold00043 277560 2 TG CA scaffold905 ScafM SNP 0010.scaffold00043 277677 1 G A scaffold905 ScafM SNP 0010.scaffold00043 277695 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 277728 9 ......... AGTTACTTG scaffold905 ScafM INDEL 0010.scaffold00043 277732 12 ............ TTTCTAAGTTCA scaffold905 ScafM INDEL 0010.scaffold00043 277734 16 ................ ATAATTCAAATTTGAT scaffold905 ScafM INDEL 0010.scaffold00043 277740 20 .................... AACTACCCACTTGATTCAAA scaffold905 ScafM INDEL 0010.scaffold00043 277757 2 .. CC scaffold905 ScafM SNP 0010.scaffold00043 277793 1 C A scaffold905 ScafM SNP 0010.scaffold00043 277830 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 277845 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 277847 1 T . scaffold905 ScafM SNP 0010.scaffold00043 277850 1 A G scaffold905 ScafM SNP 0010.scaffold00043 277892 1 A G scaffold905 ScafM SNP 0010.scaffold00043 277931 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 277940 1 . T scaffold905 ScafM SNP 0010.scaffold00043 277973 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 277995 3 ... TTT scaffold905 ScafM SNP 0010.scaffold00043 277997 1 C T scaffold905 ScafM SNP 0010.scaffold00043 278041 1 C T scaffold905 ScafM SNP 0010.scaffold00043 278072 1 T C scaffold905 ScafM SNP 0010.scaffold00043 278078 1 A G scaffold905 ScafM SNP 0010.scaffold00043 278090 1 T A scaffold905 ScafM SNP 0010.scaffold00043 278100 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 278103 7 GATGTTT ....... scaffold905 ScafM INDEL 0010.scaffold00043 278112 1 C . scaffold905 ScafM SNP 0010.scaffold00043 278127 1 C T scaffold905 ScafM SNP 0010.scaffold00043 278136 1 T C scaffold905 ScafM SNP 0010.scaffold00043 278142 1 G A scaffold905 ScafM SNP 0010.scaffold00043 278146 1 G T scaffold905 ScafM SNP 0010.scaffold00043 278154 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 278374 1 C . scaffold905 ScafM SNP 0010.scaffold00043 278385 1 G A scaffold905 ScafM SNP 0010.scaffold00043 278389 2 TG AA scaffold905 ScafM SNP 0010.scaffold00043 278398 1 T C scaffold905 ScafM SNP 0010.scaffold00043 278400 1 G T scaffold905 ScafM SNP 0010.scaffold00043 278409 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 278410 2 .G AA scaffold905 ScafM SNP 0010.scaffold00043 278536 1 G C scaffold905 ScafM SNP 0010.scaffold00043 278538 2 GC AT scaffold905 ScafM SNP 0010.scaffold00043 278545 1 C T scaffold905 ScafM SNP 0010.scaffold00043 278554 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 278603 2 AG .. scaffold905 ScafM INDEL 0010.scaffold00043 278645 1 . A scaffold905 ScafM SNP 0010.scaffold00043 278721 1 C A scaffold905 ScafM SNP 0010.scaffold00043 278741 1 A G scaffold905 ScafM SNP 0010.scaffold00043 278772 1 G T scaffold905 ScafM SNP 0010.scaffold00043 278775 1 C A scaffold905 ScafM SNP 0010.scaffold00043 278781 1 C T scaffold905 ScafM SNP 0010.scaffold00043 278784 1 T C scaffold905 ScafM SNP 0010.scaffold00043 278852 1 A G scaffold905 ScafM SNP 0010.scaffold00043 278856 1 G A scaffold905 ScafM SNP 0010.scaffold00043 278871 1 T G scaffold905 ScafM SNP 0010.scaffold00043 278953 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 279319 2 .. TC scaffold905 Both SNP 0010.scaffold00043 279354 1 A G scaffold905 Both INDEL 0010.scaffold00043 279597 1 . T scaffold905 Both SNP 0010.scaffold00043 279893 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 279919 1 . T scaffold905 ScafM SNP 0010.scaffold00043 279928 1 T C scaffold905 ScafM SNP 0010.scaffold00043 279933 1 A G scaffold905 ScafM SNP 0010.scaffold00043 279935 3 CCG ATT scaffold905 ScafM SNP 0010.scaffold00043 279939 3 TAA CTG scaffold905 ScafM SNP 0010.scaffold00043 279947 2 AT GC scaffold905 ScafM SNP 0010.scaffold00043 279965 1 C T scaffold905 ScafM SNP 0010.scaffold00043 279981 1 A G scaffold905 ScafM SNP 0010.scaffold00043 279990 1 C T scaffold905 ScafM SNP 0010.scaffold00043 279996 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280003 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280010 1 A C scaffold905 ScafM SNP 0010.scaffold00043 280013 1 C G scaffold905 ScafM SNP 0010.scaffold00043 280032 1 G A scaffold905 Both SNP 0010.scaffold00043 280319 1 T G scaffold905 Both SNP 0010.scaffold00043 280337 1 C T scaffold905 Both SNP 0010.scaffold00043 280354 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280393 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280404 1 C T scaffold905 ScafM SNP 0010.scaffold00043 280429 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280441 2 CA TG scaffold905 Both INDEL 0010.scaffold00043 280486 1 T . scaffold905 Both SNP 0010.scaffold00043 280642 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 280659 2 .. AG scaffold905 ScafM INDEL 0010.scaffold00043 280684 4 .... TATT scaffold905 ScafM INDEL 0010.scaffold00043 280719 5 ..... AACTA scaffold905 ScafM SNP 0010.scaffold00043 280739 2 TG AA scaffold905 Both SNP 0010.scaffold00043 280753 1 C A scaffold905 Both SNP 0010.scaffold00043 280869 1 T C scaffold905 ScafM SNP 0010.scaffold00043 280936 1 T G scaffold905 ScafM SNP 0010.scaffold00043 280938 1 G A scaffold905 Both SNP 0010.scaffold00043 280947 1 A T scaffold905 Both SNP 0010.scaffold00043 281018 1 G A scaffold905 Both SNP 0010.scaffold00043 281029 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 281185 2 AA .T scaffold905 ScafM SNP 0010.scaffold00043 281188 3 CCC TTT scaffold905 ScafM SNP 0010.scaffold00043 281208 2 TA CC scaffold905 ScafM SNP 0010.scaffold00043 281216 1 G C scaffold905 Both SNP 0010.scaffold00043 281249 1 C T scaffold905 Both SNP 0010.scaffold00043 281314 1 T C scaffold905 Both SNP 0010.scaffold00043 281399 1 A G scaffold905 Both SNP 0010.scaffold00043 281405 1 G T scaffold905 Both SNP 0010.scaffold00043 281442 1 C T scaffold905 Both SNP 0010.scaffold00043 281453 1 C G scaffold905 Both SNP 0010.scaffold00043 281485 1 T A scaffold905 Both SNP 0010.scaffold00043 281551 1 T C scaffold905 ReadM SNP 0010.scaffold00043 281650 1 G T - ReadM SNP 0010.scaffold00043 281660 1 C T - ScafM SNP 0010.scaffold00043 281760 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 281764 1 A . scaffold905 ScafM SNP 0010.scaffold00043 281787 1 G A scaffold905 ScafM SNP 0010.scaffold00043 281789 1 T C scaffold905 Both INDEL 0010.scaffold00043 281880 2 .. AT scaffold905 Both SNP 0010.scaffold00043 281901 1 T A scaffold905 Both SNP 0010.scaffold00043 282068 1 A G scaffold905 Both SNP 0010.scaffold00043 282077 1 T C scaffold905 Both SNP 0010.scaffold00043 282081 1 A C scaffold905 ScafM SNP 0010.scaffold00043 282110 1 T A scaffold905 ScafM SNP 0010.scaffold00043 282126 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 282133 2 .. TA scaffold905 ScafM SNP 0010.scaffold00043 282164 1 T C scaffold905 ScafM SNP 0010.scaffold00043 282166 1 G A scaffold905 Both SNP 0010.scaffold00043 282233 1 A T scaffold905 Both SNP 0010.scaffold00043 282283 1 G T scaffold905 Both SNP 0010.scaffold00043 282297 1 A G scaffold905 Both SNP 0010.scaffold00043 282397 1 C T scaffold905 Both SNP 0010.scaffold00043 282448 1 T C scaffold905 Both INDEL 0010.scaffold00043 282565 1 . A scaffold905 ScafM SNP 0010.scaffold00043 282803 2 CC AT scaffold905 Both SNP 0010.scaffold00043 282950 1 C T scaffold905 Both SNP 0010.scaffold00043 282964 2 AA GC scaffold905 Both SNP 0010.scaffold00043 283029 1 G A scaffold905 ScafM SNP 0010.scaffold00043 283064 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 283072 2 CC .G scaffold905 ScafM SNP 0010.scaffold00043 283101 1 G T scaffold905 ScafM SNP 0010.scaffold00043 283130 1 A C scaffold905 ScafM SNP 0010.scaffold00043 283138 1 G T scaffold905 ScafM SNP 0010.scaffold00043 283151 1 A T scaffold905 ScafM SNP 0010.scaffold00043 283176 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 283211 3 ... AAA scaffold905 ScafM SNP 0010.scaffold00043 283220 1 A C scaffold905 ScafM SNP 0010.scaffold00043 283231 1 A G scaffold905 Both SNP 0010.scaffold00043 283272 1 G C scaffold905 ScafM SNP 0010.scaffold00043 283303 2 GT CC scaffold905 Both SNP 0010.scaffold00043 283435 1 G A scaffold905 Both SNP 0010.scaffold00043 283573 1 A C scaffold905 Both SNP 0010.scaffold00043 283630 1 G C scaffold905 Both SNP 0010.scaffold00043 283707 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 283789 6 ...... TCTTTA scaffold905 ScafM SNP 0010.scaffold00043 283798 1 G A scaffold905 Both SNP 0010.scaffold00043 283828 1 C G scaffold905 ScafM SNP 0010.scaffold00043 283897 1 C T scaffold905 ScafM SNP 0010.scaffold00043 283906 1 G A scaffold905 ScafM SNP 0010.scaffold00043 283917 1 A G scaffold905 ScafM SNP 0010.scaffold00043 283920 1 A C scaffold905 ScafM SNP 0010.scaffold00043 283924 2 TT GC scaffold905 ScafM SNP 0010.scaffold00043 283931 1 C T scaffold905 ScafM SNP 0010.scaffold00043 283939 2 AC TA scaffold905 ScafM SNP 0010.scaffold00043 283942 1 T A scaffold905 ScafM SNP 0010.scaffold00043 283950 2 CC TT scaffold905 ScafM SNP 0010.scaffold00043 283956 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 283958 1 C . scaffold905 ScafM INDEL 0010.scaffold00043 283965 1 G . scaffold905 ScafM SNP 0010.scaffold00043 283981 1 G A scaffold905 ScafM SNP 0010.scaffold00043 284000 1 A T scaffold905 ScafM SNP 0010.scaffold00043 284004 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 284012 5 TATGC ..... scaffold905 ScafM SNP 0010.scaffold00043 284029 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284043 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284099 1 G A scaffold905 ScafM SNP 0010.scaffold00043 284401 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284415 1 T A scaffold905 ScafM SNP 0010.scaffold00043 284419 1 A G scaffold905 ScafM SNP 0010.scaffold00043 284461 1 T C scaffold905 ScafM SNP 0010.scaffold00043 284474 1 T C scaffold905 ScafM SNP 0010.scaffold00043 284529 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284533 1 T C scaffold905 ScafM SNP 0010.scaffold00043 284598 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284623 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 284693 3 ... AAT scaffold905 ScafM SNP 0010.scaffold00043 284765 1 G T scaffold905 ScafM SNP 0010.scaffold00043 284769 1 C T scaffold905 ScafM SNP 0010.scaffold00043 284781 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 284844 2 .. TC scaffold905 Both SNP 0010.scaffold00043 284969 1 C A scaffold905 Both SNP 0010.scaffold00043 285129 1 T G scaffold905 Both SNP 0010.scaffold00043 285159 1 C A scaffold905 Both SNP 0010.scaffold00043 285192 1 C T scaffold905 Both SNP 0010.scaffold00043 285201 1 A G scaffold905 Both SNP 0010.scaffold00043 285253 1 G C scaffold905 Both SNP 0010.scaffold00043 285352 1 T A scaffold905 Both SNP 0010.scaffold00043 285362 1 G C scaffold905 Both SNP 0010.scaffold00043 285380 1 G A scaffold905 Both SNP 0010.scaffold00043 285544 1 G T scaffold905 Both SNP 0010.scaffold00043 285631 1 G A scaffold905 Both SNP 0010.scaffold00043 285771 1 G T scaffold905 ScafM SNP 0010.scaffold00043 285981 3 AAC GTT scaffold905 ScafM INDEL 0010.scaffold00043 286142 6 ACTGAG ...... scaffold905 ScafM SNP 0010.scaffold00043 286152 1 C T scaffold905 Both SNP 0010.scaffold00043 286311 1 A C scaffold905 Both SNP 0010.scaffold00043 286938 1 G C scaffold905 Both SNP 0010.scaffold00043 287059 1 G A scaffold905 ReadM SNP 0010.scaffold00043 287257 1 T C - Both SNP 0010.scaffold00043 287770 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 287793 14 ATCATCAATCCACC .............. scaffold905 ScafM SNP 0010.scaffold00043 287821 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 287833 1 A . scaffold905 ScafM SNP 0010.scaffold00043 287891 1 A C scaffold905 Both SNP 0010.scaffold00043 287894 1 C T scaffold905 Both INDEL 0010.scaffold00043 288151 2 AA .. scaffold905 Both SNP 0010.scaffold00043 288251 1 T C scaffold905 Both SNP 0010.scaffold00043 288375 1 G A scaffold905 ScafM SNP 0010.scaffold00043 288504 2 TC AT scaffold905 ScafM INDEL 0010.scaffold00043 288520 14 TACTTAGAAATTTA .............. scaffold905 ScafM INDEL 0010.scaffold00043 288538 1 A . scaffold905 ScafM SNP 0010.scaffold00043 288582 1 T A scaffold905 ScafM SNP 0010.scaffold00043 288617 2 TG GT scaffold905 Both SNP 0010.scaffold00043 288742 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 288815 2 AA .. scaffold905 ScafM SNP 0010.scaffold00043 288844 1 A G scaffold905 ScafM SNP 0010.scaffold00043 288849 1 G A scaffold905 ScafM SNP 0010.scaffold00043 288861 1 G A scaffold905 ScafM SNP 0010.scaffold00043 288867 1 G A scaffold905 ScafM SNP 0010.scaffold00043 288884 2 CG TC scaffold905 ScafM SNP 0010.scaffold00043 288894 1 T C scaffold905 ReadM SNP 0010.scaffold00043 289098 1 A G - ReadM SNP 0010.scaffold00043 289259 1 A G - ReadM SNP 0010.scaffold00043 289705 1 T C - ScafM SNP 0010.scaffold00043 290018 1 A G scaffold905 Both SNP 0010.scaffold00043 290195 1 C A scaffold905 Both SNP 0010.scaffold00043 290205 1 G A scaffold905 Both SNP 0010.scaffold00043 290445 1 C G scaffold905 Both SNP 0010.scaffold00043 291096 1 T C scaffold905 Both SNP 0010.scaffold00043 291167 1 A G scaffold905 Both SNP 0010.scaffold00043 291224 1 A G scaffold905 Both SNP 0010.scaffold00043 291286 1 C A scaffold905 Both SNP 0010.scaffold00043 291938 1 T A scaffold905 Both SNP 0010.scaffold00043 291941 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 292070 4 .... ATTG scaffold905 Both SNP 0010.scaffold00043 292102 1 A G scaffold905 Both INDEL 0010.scaffold00043 292676 3 ... TAT scaffold905 ScafM SNP 0010.scaffold00043 292833 1 A G scaffold905 ReadM INDEL 0010.scaffold00043 292979 1 A . - ReadM SNP 0010.scaffold00043 293003 1 T G - ReadM SNP 0010.scaffold00043 293056 1 T C - Both INDEL 0010.scaffold00043 293225 1 . A scaffold905 ScafM SNP 0010.scaffold00043 293227 1 T A scaffold905 ReadM SNP 0010.scaffold00043 293280 1 T A - Both SNP 0010.scaffold00043 293703 1 G C scaffold905 Both SNP 0010.scaffold00043 293792 1 G T scaffold905 Both SNP 0010.scaffold00043 293953 1 C A scaffold905 Both SNP 0010.scaffold00043 294167 1 G A scaffold905 Both SNP 0010.scaffold00043 294211 1 A C scaffold905 Both SNP 0010.scaffold00043 294453 1 G A scaffold905 Both SNP 0010.scaffold00043 294668 1 G C scaffold905 ReadM SNP 0010.scaffold00043 295489 1 C T - ReadM INDEL 0010.scaffold00043 295553 1 . A - ReadM INDEL 0010.scaffold00043 295555 1 . G - ScafM SNP 0010.scaffold00043 297717 1 G T scaffold905 ScafM SNP 0010.scaffold00043 297976 1 C T scaffold905 ReadM SNP 0010.scaffold00043 298297 1 G T - ReadM SNP 0010.scaffold00043 298366 1 A G - ReadM SNP 0010.scaffold00043 298512 1 G A - ReadM SNP 0010.scaffold00043 298576 1 G C - ReadM SNP 0010.scaffold00043 298601 1 G A - ReadM SNP 0010.scaffold00043 298693 1 G A - ReadM SNP 0010.scaffold00043 298738 1 C T - ReadM SNP 0010.scaffold00043 298782 1 G A - ReadM SNP 0010.scaffold00043 298806 1 C T - ReadM SNP 0010.scaffold00043 298883 1 T G - ReadM SNP 0010.scaffold00043 298932 1 G A - ReadM SNP 0010.scaffold00043 298987 1 A G - ReadM SNP 0010.scaffold00043 299130 1 A T - ReadM SNP 0010.scaffold00043 299180 1 C A - ReadM SNP 0010.scaffold00043 299479 1 A C - ReadM INDEL 0010.scaffold00043 299648 3 ... AGA - ReadM SNP 0010.scaffold00043 299805 1 A G - ReadM SNP 0010.scaffold00043 299808 1 A G - ReadM INDEL 0010.scaffold00043 299815 1 . G - ReadM SNP 0010.scaffold00043 300211 1 C G - ReadM INDEL 0010.scaffold00043 300400 1 C . - ReadM SNP 0010.scaffold00043 300495 1 T C - Both SNP 0010.scaffold00043 300891 1 C G scaffold905 Both SNP 0010.scaffold00043 300940 1 C T scaffold905 Both SNP 0010.scaffold00043 301065 1 T C scaffold905 Both SNP 0010.scaffold00043 301156 1 T G scaffold905 Both SNP 0010.scaffold00043 301491 1 T C scaffold905 Both SNP 0010.scaffold00043 301779 1 T C scaffold905 Both SNP 0010.scaffold00043 302671 1 A G scaffold905 Both SNP 0010.scaffold00043 303002 1 A C scaffold905 Both INDEL 0010.scaffold00043 303016 2 AT .. scaffold905 Both SNP 0010.scaffold00043 303387 1 A G scaffold905 Both SNP 0010.scaffold00043 303534 1 A G scaffold905 Both SNP 0010.scaffold00043 303563 1 G A scaffold905 Both SNP 0010.scaffold00043 303586 1 T C scaffold905 ScafM SNP 0010.scaffold00043 303600 1 C T scaffold905 Both SNP 0010.scaffold00043 303618 1 G A scaffold905 ReadM INDEL 0010.scaffold00043 303721 1 G . - Both INDEL 0010.scaffold00043 303722 1 C . scaffold905 ReadM SNP 0010.scaffold00043 303909 1 A G - ScafM INDEL 0010.scaffold00043 303929 3 ... TTT scaffold905 ScafM SNP 0010.scaffold00043 303930 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 304046 14 .............. TGTGAAATGTGAAA scaffold905 Both SNP 0010.scaffold00043 304155 1 A G scaffold905 Both SNP 0010.scaffold00043 304260 1 T A scaffold905 Both SNP 0010.scaffold00043 304267 1 C T scaffold905 Both INDEL 0010.scaffold00043 304310 1 . A scaffold905 Both INDEL 0010.scaffold00043 304558 1 . A scaffold905 ReadM SNP 0010.scaffold00043 304864 1 G A - ReadM SNP 0010.scaffold00043 304898 1 T C - ReadM INDEL 0010.scaffold00043 305004 1 C . - ReadM SNP 0010.scaffold00043 305054 1 T C - ReadM SNP 0010.scaffold00043 305178 1 C T - ReadM SNP 0010.scaffold00043 305182 1 A G - ReadM INDEL 0010.scaffold00043 305212 1 G . - Both SNP 0010.scaffold00043 305281 1 C A scaffold905 ReadM INDEL 0010.scaffold00043 305615 1 . T - ReadM SNP 0010.scaffold00043 305660 1 T G - ReadM SNP 0010.scaffold00043 305759 1 C A - ReadM SNP 0010.scaffold00043 306020 1 C T - ReadM SNP 0010.scaffold00043 306037 1 G A - ReadM SNP 0010.scaffold00043 306505 1 T G - ReadM SNP 0010.scaffold00043 306550 1 G T - ReadM SNP 0010.scaffold00043 306590 1 A G - ReadM SNP 0010.scaffold00043 307120 1 T C - ReadM SNP 0010.scaffold00043 307241 1 A G - ReadM SNP 0010.scaffold00043 307304 1 C A - Both SNP 0010.scaffold00043 307452 1 A C scaffold905 Both SNP 0010.scaffold00043 307510 1 A G scaffold905 Both SNP 0010.scaffold00043 307516 1 C T scaffold905 ReadM SNP 0010.scaffold00043 307702 1 C T - ReadM SNP 0010.scaffold00043 307768 1 C T - ReadM SNP 0010.scaffold00043 307921 1 T C - Both SNP 0010.scaffold00043 308037 1 A C scaffold905 Both SNP 0010.scaffold00043 308052 1 C A scaffold905 Both SNP 0010.scaffold00043 308084 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 308169 6 ...... CATTGA scaffold905 ScafM INDEL 0010.scaffold00043 308221 10 AAATGGAAAC .......... scaffold905 ScafM SNP 0010.scaffold00043 308327 2 AA TT scaffold905 ScafM SNP 0010.scaffold00043 308331 1 T G scaffold905 ScafM SNP 0010.scaffold00043 308373 1 G T scaffold905 ScafM SNP 0010.scaffold00043 308384 1 C T scaffold905 Both SNP 0010.scaffold00043 308447 1 T C scaffold905 Both SNP 0010.scaffold00043 308454 1 G A scaffold905 ScafM SNP 0010.scaffold00043 308583 1 G T scaffold905 ScafM SNP 0010.scaffold00043 308592 1 G A scaffold905 ScafM SNP 0010.scaffold00043 308613 1 A G scaffold905 ScafM SNP 0010.scaffold00043 308622 1 A T scaffold905 ScafM SNP 0010.scaffold00043 308636 1 A T scaffold905 ScafM SNP 0010.scaffold00043 308647 1 A T scaffold905 Both SNP 0010.scaffold00043 308704 1 G A scaffold905 Both SNP 0010.scaffold00043 308803 1 G A scaffold905 Both SNP 0010.scaffold00043 308828 1 G A scaffold905 ScafM SNP 0010.scaffold00043 308947 2 AC TA scaffold905 ScafM INDEL 0010.scaffold00043 309007 1 . G scaffold905 ScafM SNP 0010.scaffold00043 309087 1 G A scaffold905 ScafM SNP 0010.scaffold00043 309344 1 C T scaffold905 ReadM SNP 0010.scaffold00043 310995 1 A G - ReadM SNP 0010.scaffold00043 311025 1 G A - ReadM SNP 0010.scaffold00043 311099 1 T C - ReadM SNP 0010.scaffold00043 311178 1 C T - ReadM SNP 0010.scaffold00043 311782 1 A G - ReadM INDEL 0010.scaffold00043 311793 1 A . - ReadM INDEL 0010.scaffold00043 312102 1 T . - Both SNP 0010.scaffold00043 313569 1 A G scaffold905 ScafM SNP 0010.scaffold00043 314451 1 T A scaffold905 Both SNP 0010.scaffold00043 315508 1 A G scaffold905 Both INDEL 0010.scaffold00043 319087 1 T . scaffold905 Both SNP 0010.scaffold00043 319186 1 A G scaffold905 ReadM SNP 0010.scaffold00043 319400 1 T A - ReadM SNP 0010.scaffold00043 319436 1 A G - Both SNP 0010.scaffold00043 319605 1 G C scaffold905 Both SNP 0010.scaffold00043 319657 1 C T scaffold905 Both SNP 0010.scaffold00043 319894 1 C T scaffold905 ScafM SNP 0010.scaffold00043 320400 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 320414 1 A . scaffold905 ScafM SNP 0010.scaffold00043 320416 1 A C scaffold905 ScafM SNP 0010.scaffold00043 320426 1 A G scaffold905 ScafM SNP 0010.scaffold00043 320448 1 A C scaffold905 ScafM SNP 0010.scaffold00043 320455 1 A T scaffold905 ScafM SNP 0010.scaffold00043 320458 1 T G scaffold905 ScafM SNP 0010.scaffold00043 320460 1 C T scaffold905 ScafM SNP 0010.scaffold00043 320480 1 C T scaffold905 ScafM SNP 0010.scaffold00043 320514 1 T C scaffold905 ScafM SNP 0010.scaffold00043 320562 1 A G scaffold905 ScafM SNP 0010.scaffold00043 320568 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 320573 7 ....... CTATAGC scaffold905 ScafM INDEL 0010.scaffold00043 320577 3 ... TGG scaffold905 ScafM INDEL 0010.scaffold00043 320578 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 320579 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 320581 3 ... AAA scaffold905 ScafM SNP 0010.scaffold00043 320607 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 320611 7 TTTCCTT ....... scaffold905 ScafM INDEL 0010.scaffold00043 320624 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 320626 1 T . scaffold905 ScafM SNP 0010.scaffold00043 320628 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 320640 2 .A CG scaffold905 ScafM SNP 0010.scaffold00043 320649 2 AG CT scaffold905 ScafM INDEL 0010.scaffold00043 320706 2 TA .. scaffold905 ScafM SNP 0010.scaffold00043 320721 1 A G scaffold905 ScafM SNP 0010.scaffold00043 320742 1 A G scaffold905 ScafM SNP 0010.scaffold00043 320957 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 320985 33 TATACCCACCAGAGATAAACAATTTTTAAAAAA ................................. scaffold905 ScafM SNP 0010.scaffold00043 321065 1 A C scaffold905 ScafM SNP 0010.scaffold00043 321069 1 G T scaffold905 ScafM SNP 0010.scaffold00043 321087 1 T C scaffold905 ScafM SNP 0010.scaffold00043 321167 1 G T scaffold905 ScafM SNP 0010.scaffold00043 321170 1 C G scaffold905 ScafM SNP 0010.scaffold00043 321204 1 A C scaffold905 ScafM SNP 0010.scaffold00043 321244 1 C T scaffold905 Both SNP 0010.scaffold00043 321288 1 T C scaffold905 ScafM SNP 0010.scaffold00043 321338 1 G A scaffold905 ScafM SNP 0010.scaffold00043 321357 1 C G scaffold905 ScafM SNP 0010.scaffold00043 321394 1 A G scaffold905 ScafM SNP 0010.scaffold00043 321994 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 322016 1 . T scaffold905 ScafM SNP 0010.scaffold00043 322030 1 T C scaffold905 ScafM SNP 0010.scaffold00043 322044 2 CA TC scaffold905 ScafM SNP 0010.scaffold00043 322062 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322100 1 C A scaffold905 ScafM SNP 0010.scaffold00043 322125 1 C A scaffold905 ScafM SNP 0010.scaffold00043 322141 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322338 1 G C scaffold905 ScafM SNP 0010.scaffold00043 322418 2 TC AA scaffold905 ScafM SNP 0010.scaffold00043 322422 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 322447 15 ............... ACTAAAGATAGTAAT scaffold905 ScafM SNP 0010.scaffold00043 322456 1 A C scaffold905 ScafM SNP 0010.scaffold00043 322472 1 G C scaffold905 ScafM SNP 0010.scaffold00043 322485 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 322503 1 C . scaffold905 ScafM SNP 0010.scaffold00043 322530 2 TA CT scaffold905 ScafM SNP 0010.scaffold00043 322544 1 G A scaffold905 ScafM SNP 0010.scaffold00043 322551 1 C A scaffold905 ScafM SNP 0010.scaffold00043 322569 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322579 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322581 1 T C scaffold905 ScafM SNP 0010.scaffold00043 322583 1 G C scaffold905 ScafM SNP 0010.scaffold00043 322599 1 G A scaffold905 ScafM SNP 0010.scaffold00043 322610 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 322612 2 .C AA scaffold905 ScafM INDEL 0010.scaffold00043 322618 1 . T scaffold905 ScafM SNP 0010.scaffold00043 322678 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322711 1 G A scaffold905 ScafM SNP 0010.scaffold00043 322714 1 A C scaffold905 ScafM SNP 0010.scaffold00043 322719 1 A T scaffold905 ScafM SNP 0010.scaffold00043 322767 1 T C scaffold905 ScafM SNP 0010.scaffold00043 322773 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 322778 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 322780 4 TTCG .... scaffold905 ScafM SNP 0010.scaffold00043 322810 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 322818 4 .... AATT scaffold905 ScafM SNP 0010.scaffold00043 322825 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322844 1 T C scaffold905 ScafM SNP 0010.scaffold00043 322859 1 A G scaffold905 ScafM SNP 0010.scaffold00043 322861 1 C A scaffold905 ScafM SNP 0010.scaffold00043 322863 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 322888 1 A . scaffold905 ScafM SNP 0010.scaffold00043 322919 1 C T scaffold905 ScafM SNP 0010.scaffold00043 323027 1 A G scaffold905 ScafM SNP 0010.scaffold00043 323299 2 CC AA scaffold905 ScafM SNP 0010.scaffold00043 323330 1 G A scaffold905 ScafM SNP 0010.scaffold00043 323359 1 A G scaffold905 ScafM SNP 0010.scaffold00043 323365 1 T C scaffold905 ScafM SNP 0010.scaffold00043 323552 1 G A scaffold905 ScafM SNP 0010.scaffold00043 323567 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 323660 8 ........ ATGAAGCA scaffold905 ScafM SNP 0010.scaffold00043 323665 1 T G scaffold905 ScafM SNP 0010.scaffold00043 323684 1 A T scaffold905 ScafM SNP 0010.scaffold00043 323738 1 C T scaffold905 ScafM SNP 0010.scaffold00043 323766 1 T C scaffold905 ScafM SNP 0010.scaffold00043 323920 1 A T scaffold905 Both SNP 0010.scaffold00043 324356 1 T G scaffold905 ReadM SNP 0010.scaffold00043 324411 1 C T - ScafM INDEL 0010.scaffold00043 325598 5 ATGAC ..... scaffold905 ScafM SNP 0010.scaffold00043 325637 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 325650 3 AAT ... scaffold905 ScafM SNP 0010.scaffold00043 325726 1 C A scaffold905 ScafM SNP 0010.scaffold00043 325735 1 G A scaffold905 ScafM SNP 0010.scaffold00043 325737 1 A G scaffold905 ScafM SNP 0010.scaffold00043 325773 1 C T scaffold905 ScafM SNP 0010.scaffold00043 325827 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 325831 2 TG .. scaffold905 ScafM SNP 0010.scaffold00043 325849 1 T A scaffold905 ScafM SNP 0010.scaffold00043 325864 1 A T scaffold905 ScafM SNP 0010.scaffold00043 325979 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 326027 4 .... ATAT scaffold905 ScafM INDEL 0010.scaffold00043 326634 5 ..... AACTA scaffold905 ScafM INDEL 0010.scaffold00043 326636 1 . T scaffold905 ScafM SNP 0010.scaffold00043 326638 1 C T scaffold905 ScafM SNP 0010.scaffold00043 326640 1 T G scaffold905 ScafM SNP 0010.scaffold00043 326642 2 CC TA scaffold905 ScafM INDEL 0010.scaffold00043 326646 4 .... GACA scaffold905 ScafM INDEL 0010.scaffold00043 326701 8 ........ TGATACAG scaffold905 ScafM SNP 0010.scaffold00043 326835 1 T C scaffold905 ScafM SNP 0010.scaffold00043 326837 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 327230 1 T . scaffold905 ScafM SNP 0010.scaffold00043 327287 1 T C scaffold905 ScafM SNP 0010.scaffold00043 327296 1 T G scaffold905 ScafM SNP 0010.scaffold00043 327429 1 T A scaffold905 ScafM SNP 0010.scaffold00043 327433 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 327469 2 .. TT scaffold905 ScafM INDEL 0010.scaffold00043 327550 2 .. CC scaffold905 ScafM SNP 0010.scaffold00043 327552 1 A T scaffold905 ScafM SNP 0010.scaffold00043 327559 1 T C scaffold905 ScafM SNP 0010.scaffold00043 327562 1 T C scaffold905 ScafM SNP 0010.scaffold00043 327568 1 G A scaffold905 ScafM SNP 0010.scaffold00043 327600 1 G A scaffold905 ScafM SNP 0010.scaffold00043 328230 1 C T scaffold905 ScafM SNP 0010.scaffold00043 328353 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 328414 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 328599 3 ... GGA scaffold905 ScafM SNP 0010.scaffold00043 328620 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 328683 33 ................................. TTTTTTTTTTTTTGAGGGGAAAATAATATCAAT scaffold905 ScafM INDEL 0010.scaffold00043 328709 8 ........ ATAATAAC scaffold905 ScafM INDEL 0010.scaffold00043 328780 1 T . scaffold905 Both SNP 0010.scaffold00043 329024 1 A C scaffold905 Both SNP 0010.scaffold00043 329069 1 T C scaffold905 Both INDEL 0010.scaffold00043 329220 3 ... GAT scaffold905 ScafM INDEL 0010.scaffold00043 329346 5 ..... TAATC scaffold905 ScafM INDEL 0010.scaffold00043 329372 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 329385 2 AA .. scaffold905 ScafM SNP 0010.scaffold00043 329394 3 TTG AAT scaffold905 ScafM SNP 0010.scaffold00043 329410 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 329591 1 . G scaffold905 ScafM SNP 0010.scaffold00043 329596 1 T C scaffold905 ScafM SNP 0010.scaffold00043 329603 1 A G scaffold905 ScafM SNP 0010.scaffold00043 329639 2 GG AA scaffold905 ScafM SNP 0010.scaffold00043 329644 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 330838 1 . C scaffold905 ScafM INDEL 0010.scaffold00043 330872 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 330950 1 . G scaffold905 ScafM INDEL 0010.scaffold00043 330995 1 A . scaffold905 ScafM SNP 0010.scaffold00043 331124 1 A T scaffold905 ScafM SNP 0010.scaffold00043 331165 1 G C scaffold905 ScafM SNP 0010.scaffold00043 331249 1 T G scaffold905 ScafM SNP 0010.scaffold00043 331272 1 A G scaffold905 ScafM SNP 0010.scaffold00043 331321 1 G A scaffold905 ScafM SNP 0010.scaffold00043 331329 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 331407 4 GCGT .... scaffold905 ScafM SNP 0010.scaffold00043 331428 1 A G scaffold905 ScafM SNP 0010.scaffold00043 331434 2 AG TT scaffold905 ScafM SNP 0010.scaffold00043 331440 1 C G scaffold905 ScafM SNP 0010.scaffold00043 331447 1 G A scaffold905 ScafM SNP 0010.scaffold00043 331453 1 T C scaffold905 ScafM SNP 0010.scaffold00043 331456 1 T G scaffold905 ScafM SNP 0010.scaffold00043 331462 1 G T scaffold905 ScafM SNP 0010.scaffold00043 331465 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 331466 4 .... ATTA scaffold905 ScafM SNP 0010.scaffold00043 331470 1 C A scaffold905 ScafM SNP 0010.scaffold00043 331480 1 T C scaffold905 ScafM SNP 0010.scaffold00043 331493 1 T C scaffold905 ScafM SNP 0010.scaffold00043 331521 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 331525 1 A . scaffold905 ScafM SNP 0010.scaffold00043 331536 1 G A scaffold905 Both SNP 0010.scaffold00043 331650 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 332042 1 . T scaffold905 ScafM SNP 0010.scaffold00043 332070 1 C T scaffold905 ReadM SNP 0010.scaffold00043 332194 1 A C - Both SNP 0010.scaffold00043 332223 1 C T scaffold905 Both INDEL 0010.scaffold00043 332345 1 T . scaffold905 ReadM SNP 0010.scaffold00043 332743 1 T C - ReadM SNP 0010.scaffold00043 332766 1 C T - ReadM SNP 0010.scaffold00043 332807 1 C A - Both SNP 0010.scaffold00043 333007 1 T G scaffold905 Both SNP 0010.scaffold00043 333078 1 A T scaffold905 ScafM SNP 0010.scaffold00043 333320 1 A G scaffold905 Both SNP 0010.scaffold00043 333571 1 C A scaffold905 ReadM INDEL 0010.scaffold00043 333615 1 T . - ReadM SNP 0010.scaffold00043 333709 1 A G - ReadM SNP 0010.scaffold00043 333776 1 C T - ReadM SNP 0010.scaffold00043 333780 1 A G - ReadM SNP 0010.scaffold00043 333879 1 T C - ReadM SNP 0010.scaffold00043 333881 1 G A - ScafM INDEL 0010.scaffold00043 333933 1 . T scaffold905 ScafM SNP 0010.scaffold00043 333947 1 G A scaffold905 Both INDEL 0010.scaffold00043 333979 1 T . scaffold905 Both SNP 0010.scaffold00043 334273 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 334437 2 .. AA scaffold905 ScafM SNP 0010.scaffold00043 334469 2 AG CA scaffold905 ScafM SNP 0010.scaffold00043 334487 1 G A scaffold905 ScafM SNP 0010.scaffold00043 334493 1 A G scaffold905 ScafM SNP 0010.scaffold00043 334514 1 A T scaffold905 ScafM SNP 0010.scaffold00043 334518 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 334529 1 T . scaffold905 ScafM SNP 0010.scaffold00043 334546 1 A G scaffold905 ScafM SNP 0010.scaffold00043 334557 2 TT AA scaffold905 ScafM SNP 0010.scaffold00043 334561 1 T G scaffold905 ScafM SNP 0010.scaffold00043 334579 1 G T scaffold905 ScafM SNP 0010.scaffold00043 334584 2 CG AA scaffold905 ScafM INDEL 0010.scaffold00043 334597 1 C . scaffold905 ScafM SNP 0010.scaffold00043 334622 1 T C scaffold905 ScafM SNP 0010.scaffold00043 334632 1 C T scaffold905 ScafM SNP 0010.scaffold00043 334637 1 A G scaffold905 ScafM SNP 0010.scaffold00043 334647 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 334656 9 ......... ACGATTGCT scaffold905 ScafM SNP 0010.scaffold00043 334668 1 A G scaffold905 ScafM SNP 0010.scaffold00043 334671 1 T C scaffold905 ScafM SNP 0010.scaffold00043 334678 1 A G scaffold905 ScafM SNP 0010.scaffold00043 334680 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 334688 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 334690 1 G . scaffold905 ScafM SNP 0010.scaffold00043 334696 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 334717 1 C . scaffold905 ScafM SNP 0010.scaffold00043 334738 1 T A scaffold905 ScafM SNP 0010.scaffold00043 334751 1 C A scaffold905 ScafM SNP 0010.scaffold00043 334755 1 G A scaffold905 ScafM SNP 0010.scaffold00043 334769 1 A T scaffold905 ScafM SNP 0010.scaffold00043 334795 1 T C scaffold905 ScafM SNP 0010.scaffold00043 334805 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 334809 4 .... TATT scaffold905 ScafM INDEL 0010.scaffold00043 334850 8 ........ ACATTTTT scaffold905 ScafM SNP 0010.scaffold00043 334871 1 C T scaffold905 ScafM SNP 0010.scaffold00043 334888 1 G A scaffold905 ScafM SNP 0010.scaffold00043 334969 1 A G scaffold905 ScafM SNP 0010.scaffold00043 335842 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 335850 7 ....... AGAAAAG scaffold905 ScafM INDEL 0010.scaffold00043 335872 7 ....... CCTAAAT scaffold905 ScafM SNP 0010.scaffold00043 335906 1 T C scaffold905 ScafM SNP 0010.scaffold00043 335914 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 335989 4 TGTT .... scaffold905 ScafM SNP 0010.scaffold00043 336102 1 C T scaffold905 ScafM SNP 0010.scaffold00043 336131 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 336318 3 ... AAA scaffold905 ScafM SNP 0010.scaffold00043 336327 1 G A scaffold905 Both SNP 0010.scaffold00043 336423 1 A C scaffold905 Both SNP 0010.scaffold00043 336474 1 G A scaffold905 ScafM SNP 0010.scaffold00043 336612 1 T A scaffold905 ScafM SNP 0010.scaffold00043 336641 1 T C scaffold905 ScafM SNP 0010.scaffold00043 336771 1 A G scaffold905 Both SNP 0010.scaffold00043 337546 1 C A scaffold905 Both SNP 0010.scaffold00043 337617 1 T A scaffold905 Both SNP 0010.scaffold00043 337624 1 T G scaffold905 Both SNP 0010.scaffold00043 337639 1 A G scaffold905 ScafM SNP 0010.scaffold00043 337778 1 C T scaffold905 ScafM SNP 0010.scaffold00043 337781 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 337786 1 A . scaffold905 ScafM SNP 0010.scaffold00043 337809 1 A G scaffold905 ScafM SNP 0010.scaffold00043 337813 1 G T scaffold905 ScafM SNP 0010.scaffold00043 337825 1 A G scaffold905 ScafM SNP 0010.scaffold00043 337838 1 G T scaffold905 ScafM SNP 0010.scaffold00043 337866 1 C A scaffold905 ScafM SNP 0010.scaffold00043 337870 1 T C scaffold905 ScafM SNP 0010.scaffold00043 337872 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 337875 1 . T scaffold905 ScafM SNP 0010.scaffold00043 338059 1 C T scaffold905 ScafM SNP 0010.scaffold00043 338065 1 C T scaffold905 Both SNP 0010.scaffold00043 338266 1 A G scaffold905 ReadM SNP 0010.scaffold00043 338372 1 T C - Both SNP 0010.scaffold00043 338416 1 C T scaffold905 Both SNP 0010.scaffold00043 338515 1 A G scaffold905 ScafM SNP 0010.scaffold00043 338545 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 338546 3 ... AAG scaffold905 Both SNP 0010.scaffold00043 338625 1 C T scaffold905 Both SNP 0010.scaffold00043 338631 1 T A scaffold905 Both SNP 0010.scaffold00043 338652 1 C T scaffold905 Both SNP 0010.scaffold00043 338687 1 G A scaffold905 Both SNP 0010.scaffold00043 338761 1 T A scaffold905 Both SNP 0010.scaffold00043 338812 1 T A scaffold905 Both SNP 0010.scaffold00043 338828 1 G A scaffold905 ReadM SNP 0010.scaffold00043 338876 1 C A - ReadM SNP 0010.scaffold00043 338945 1 C A - ReadM SNP 0010.scaffold00043 338957 1 A G - ScafM SNP 0010.scaffold00043 339152 1 C A scaffold905 Both SNP 0010.scaffold00043 339181 1 A G scaffold905 ReadM SNP 0010.scaffold00043 339208 1 T C - ScafM SNP 0010.scaffold00043 339345 1 T A scaffold905 ScafM SNP 0010.scaffold00043 339348 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 339410 3 ... AGG scaffold905 ScafM SNP 0010.scaffold00043 339413 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 339414 1 . T scaffold905 ScafM SNP 0010.scaffold00043 339765 2 CG AA scaffold905 ScafM SNP 0010.scaffold00043 339918 1 A T scaffold905 ScafM SNP 0010.scaffold00043 339926 1 T G scaffold905 Both SNP 0010.scaffold00043 340020 1 T A scaffold905 Both SNP 0010.scaffold00043 340092 1 A G scaffold905 Both SNP 0010.scaffold00043 340195 1 G A scaffold905 Both SNP 0010.scaffold00043 340252 1 T A scaffold905 Both SNP 0010.scaffold00043 340318 1 T C scaffold905 ScafM SNP 0010.scaffold00043 340573 1 A T scaffold905 Both SNP 0010.scaffold00043 344907 1 G C scaffold905 Both SNP 0010.scaffold00043 344913 1 T C scaffold905 Both SNP 0010.scaffold00043 344938 1 T C scaffold905 Both SNP 0010.scaffold00043 345092 1 T C scaffold905 Both SNP 0010.scaffold00043 345113 1 T C scaffold905 Both SNP 0010.scaffold00043 345178 1 T C scaffold905 Both SNP 0010.scaffold00043 345202 1 A T scaffold905 Both SNP 0010.scaffold00043 345470 1 A G scaffold905 Both SNP 0010.scaffold00043 345527 1 G A scaffold905 Both SNP 0010.scaffold00043 345566 1 C T scaffold905 Both SNP 0010.scaffold00043 345662 1 C T scaffold905 Both SNP 0010.scaffold00043 346091 1 A T scaffold905 Both SNP 0010.scaffold00043 346101 1 A T scaffold905 Both INDEL 0010.scaffold00043 346122 1 . T scaffold905 ScafM SNP 0010.scaffold00043 346196 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 346205 1 . G scaffold905 ScafM SNP 0010.scaffold00043 346232 1 G A scaffold905 ScafM SNP 0010.scaffold00043 346253 1 G C scaffold905 ScafM SNP 0010.scaffold00043 346260 1 G A scaffold905 ScafM SNP 0010.scaffold00043 346262 1 A G scaffold905 ScafM SNP 0010.scaffold00043 346270 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 346277 1 T . scaffold905 ScafM SNP 0010.scaffold00043 346290 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 346297 9 ......... GTGTTTTTT scaffold905 ScafM INDEL 0010.scaffold00043 346304 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 346351 1 A . scaffold905 ScafM SNP 0010.scaffold00043 346356 1 A T scaffold905 ScafM SNP 0010.scaffold00043 346358 1 A T scaffold905 ScafM SNP 0010.scaffold00043 346365 1 T G scaffold905 ScafM SNP 0010.scaffold00043 346562 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 346563 1 . G scaffold905 ScafM INDEL 0010.scaffold00043 346586 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 346613 8 ........ TACTTGTA scaffold905 ScafM INDEL 0010.scaffold00043 346616 1 . C scaffold905 ScafM SNP 0010.scaffold00043 346635 1 T C scaffold905 ScafM SNP 0010.scaffold00043 346637 1 T A scaffold905 ScafM SNP 0010.scaffold00043 346660 1 T G scaffold905 ScafM SNP 0010.scaffold00043 346666 1 G A scaffold905 ScafM SNP 0010.scaffold00043 346673 1 C A scaffold905 ScafM SNP 0010.scaffold00043 346679 1 T C scaffold905 ScafM SNP 0010.scaffold00043 346684 1 C T scaffold905 ScafM SNP 0010.scaffold00043 346696 1 T C scaffold905 ScafM SNP 0010.scaffold00043 346698 1 T C scaffold905 ScafM SNP 0010.scaffold00043 346710 1 A G scaffold905 ScafM SNP 0010.scaffold00043 346726 1 C A scaffold905 ScafM SNP 0010.scaffold00043 346731 1 G A scaffold905 ScafM SNP 0010.scaffold00043 346735 1 T C scaffold905 ScafM SNP 0010.scaffold00043 346737 1 C T scaffold905 ScafM SNP 0010.scaffold00043 346749 1 C T scaffold905 ScafM SNP 0010.scaffold00043 346756 1 G A scaffold905 ScafM SNP 0010.scaffold00043 346762 2 AC CT scaffold905 ScafM SNP 0010.scaffold00043 346779 1 T G scaffold905 ScafM SNP 0010.scaffold00043 346794 1 C T scaffold905 ScafM SNP 0010.scaffold00043 346797 1 C T scaffold905 ScafM SNP 0010.scaffold00043 347476 1 A T scaffold905 ScafM SNP 0010.scaffold00043 347573 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 347897 1 . A scaffold905 ScafM SNP 0010.scaffold00043 347932 1 T C scaffold905 ScafM SNP 0010.scaffold00043 347937 1 A C scaffold905 ScafM SNP 0010.scaffold00043 347948 1 G C scaffold905 ScafM INDEL 0010.scaffold00043 347981 2 .. AA scaffold905 ScafM SNP 0010.scaffold00043 347983 1 G A scaffold905 ScafM SNP 0010.scaffold00043 348018 1 G A scaffold905 ScafM SNP 0010.scaffold00043 348021 1 A T scaffold905 ScafM SNP 0010.scaffold00043 348033 1 T C scaffold905 ScafM SNP 0010.scaffold00043 348047 1 C A scaffold905 ScafM SNP 0010.scaffold00043 348062 1 C A scaffold905 ScafM SNP 0010.scaffold00043 348070 1 G C scaffold905 ScafM INDEL 0010.scaffold00043 348081 2 TT .G scaffold905 ScafM SNP 0010.scaffold00043 348085 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 348089 1 . T scaffold905 ScafM SNP 0010.scaffold00043 348104 1 G C scaffold905 ScafM SNP 0010.scaffold00043 348117 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 348141 5 ATTAA ..... scaffold905 ScafM SNP 0010.scaffold00043 348187 1 A T scaffold905 ScafM SNP 0010.scaffold00043 348190 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 348192 2 TG .. scaffold905 ScafM INDEL 0010.scaffold00043 348196 3 TTT ... scaffold905 ScafM SNP 0010.scaffold00043 348200 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 348204 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 348245 4 TATC .... scaffold905 ScafM SNP 0010.scaffold00043 348253 1 T G scaffold905 ScafM SNP 0010.scaffold00043 348267 1 A G scaffold905 ScafM SNP 0010.scaffold00043 348301 1 T A scaffold905 ScafM SNP 0010.scaffold00043 348333 1 G A scaffold905 ScafM SNP 0010.scaffold00043 348336 1 A G scaffold905 ScafM SNP 0010.scaffold00043 349015 1 G C scaffold905 ScafM SNP 0010.scaffold00043 349089 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 349126 3 TAT ... scaffold905 ScafM SNP 0010.scaffold00043 349136 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 349149 2 GC .. scaffold905 ScafM SNP 0010.scaffold00043 349152 1 T C scaffold905 ScafM SNP 0010.scaffold00043 349278 1 A T scaffold905 Both INDEL 0010.scaffold00043 349283 1 . A scaffold905 Both SNP 0010.scaffold00043 349289 1 G A scaffold905 ScafM SNP 0010.scaffold00043 349585 1 T C scaffold905 ScafM SNP 0010.scaffold00043 349597 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 349598 2 .. TA scaffold905 ScafM INDEL 0010.scaffold00043 349635 3 ... ATT scaffold905 ScafM INDEL 0010.scaffold00043 349639 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 349701 7 ....... AGCCCAT scaffold905 ScafM SNP 0010.scaffold00043 349713 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 350106 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 350112 2 GG .. scaffold905 ScafM SNP 0010.scaffold00043 350147 1 C T scaffold905 ScafM SNP 0010.scaffold00043 350168 1 G A scaffold905 ScafM SNP 0010.scaffold00043 350193 1 A T scaffold905 ScafM SNP 0010.scaffold00043 350199 2 TA GT scaffold905 ScafM SNP 0010.scaffold00043 350226 1 G C scaffold905 ScafM SNP 0010.scaffold00043 350238 1 A G scaffold905 ScafM SNP 0010.scaffold00043 350268 2 AG GA scaffold905 Both SNP 0010.scaffold00043 350617 1 C T scaffold905 Both SNP 0010.scaffold00043 350657 1 T C scaffold905 Both INDEL 0010.scaffold00043 350707 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 350752 1 A . scaffold905 ScafM SNP 0010.scaffold00043 350754 5 AATGG GTCAC scaffold905 ScafM SNP 0010.scaffold00043 350774 1 T G scaffold905 ReadM SNP 0010.scaffold00043 351054 1 G A - ReadM SNP 0010.scaffold00043 351103 1 T G - ReadM SNP 0010.scaffold00043 351137 1 C T - ReadM INDEL 0010.scaffold00043 351215 1 . A - Both SNP 0010.scaffold00043 351305 1 A C scaffold905 Both SNP 0010.scaffold00043 351613 1 C T scaffold905 Both SNP 0010.scaffold00043 351674 1 C G scaffold905 Both SNP 0010.scaffold00043 351686 1 G A scaffold905 Both SNP 0010.scaffold00043 351703 1 A C scaffold905 ReadM SNP 0010.scaffold00043 351790 1 C T - ReadM SNP 0010.scaffold00043 351832 1 C T - ReadM SNP 0010.scaffold00043 351845 1 T C - ReadM INDEL 0010.scaffold00043 351950 2 AA .. - ScafM INDEL 0010.scaffold00043 351979 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 351991 2 TA .. scaffold905 Both INDEL 0010.scaffold00043 352231 1 . T scaffold905 ScafM INDEL 0010.scaffold00043 352653 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 352890 3 ATT ... scaffold905 ScafM SNP 0010.scaffold00043 352926 1 T C scaffold905 ScafM SNP 0010.scaffold00043 353248 1 G C scaffold905 ScafM SNP 0010.scaffold00043 353339 1 G A scaffold905 ScafM SNP 0010.scaffold00043 354398 1 G A scaffold905 ScafM SNP 0010.scaffold00043 354409 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 354452 1 . T scaffold905 ScafM SNP 0010.scaffold00043 354459 1 A G scaffold905 ScafM SNP 0010.scaffold00043 354485 1 T C scaffold905 ScafM SNP 0010.scaffold00043 354517 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 354545 1 . A scaffold905 ScafM SNP 0010.scaffold00043 354548 1 T G scaffold905 ScafM SNP 0010.scaffold00043 354564 1 G C scaffold905 ScafM SNP 0010.scaffold00043 354572 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 354585 8 TCATCAAT ........ scaffold905 ScafM SNP 0010.scaffold00043 354619 1 G T scaffold905 ScafM SNP 0010.scaffold00043 354737 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 354741 8 GTGCTAAT ........ scaffold905 ScafM INDEL 0010.scaffold00043 354771 4 TCCG .... scaffold905 ScafM INDEL 0010.scaffold00043 354880 1 . A scaffold905 ScafM SNP 0010.scaffold00043 354977 1 A C scaffold905 ScafM SNP 0010.scaffold00043 354996 1 A C scaffold905 ScafM SNP 0010.scaffold00043 355031 1 A G scaffold905 ScafM SNP 0010.scaffold00043 355042 1 C A scaffold905 ScafM SNP 0010.scaffold00043 355060 1 T A scaffold905 ScafM SNP 0010.scaffold00043 355071 1 T C scaffold905 ScafM SNP 0010.scaffold00043 355130 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 355142 4 ATAA .... scaffold905 ScafM SNP 0010.scaffold00043 355157 2 AT CC scaffold905 ScafM SNP 0010.scaffold00043 355188 1 T C scaffold905 ScafM SNP 0010.scaffold00043 355197 1 C T scaffold905 ScafM SNP 0010.scaffold00043 355209 2 GT AC scaffold905 ScafM SNP 0010.scaffold00043 355220 1 T C scaffold905 ScafM SNP 0010.scaffold00043 355222 1 A G scaffold905 ScafM SNP 0010.scaffold00043 355225 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 355233 3 ... ATT scaffold905 ScafM SNP 0010.scaffold00043 355251 1 A G scaffold905 ScafM SNP 0010.scaffold00043 355254 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 355758 8 TCTTAGAA ........ scaffold905 ScafM INDEL 0010.scaffold00043 355790 1 . A scaffold905 ScafM SNP 0010.scaffold00043 355802 1 C A scaffold905 ScafM SNP 0010.scaffold00043 355831 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 355861 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 355865 1 . T scaffold905 Both SNP 0010.scaffold00043 355945 1 G T scaffold905 ScafM SNP 0010.scaffold00043 356304 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 356400 1 T . scaffold905 ScafM SNP 0010.scaffold00043 356402 1 A G scaffold905 ScafM SNP 0010.scaffold00043 356423 1 A T scaffold905 ScafM SNP 0010.scaffold00043 356454 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 356480 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 356920 3 AAA ... scaffold905 ScafM INDEL 0010.scaffold00043 357002 1 . A scaffold905 ScafM SNP 0010.scaffold00043 357087 1 T C scaffold905 ScafM SNP 0010.scaffold00043 357107 1 C T scaffold905 ScafM SNP 0010.scaffold00043 357121 1 C T scaffold905 ScafM SNP 0010.scaffold00043 357160 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 357305 7 TTTTTTG ....... scaffold905 ScafM SNP 0010.scaffold00043 357324 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 357327 2 GA .. scaffold905 ScafM SNP 0010.scaffold00043 357330 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 357332 1 T . scaffold905 ScafM SNP 0010.scaffold00043 357339 1 A C scaffold905 Both SNP 0010.scaffold00043 357519 2 TT CC scaffold905 ScafM INDEL 0010.scaffold00043 357671 3 TTG ... scaffold905 ScafM INDEL 0010.scaffold00043 357690 2 TC .A scaffold905 Both SNP 0010.scaffold00043 357800 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 357871 2 TA .. scaffold905 ScafM INDEL 0010.scaffold00043 357874 3 ATA ..G scaffold905 ScafM SNP 0010.scaffold00043 357881 1 G A scaffold905 ScafM SNP 0010.scaffold00043 357886 1 C T scaffold905 ScafM SNP 0010.scaffold00043 357898 1 A G scaffold905 ScafM SNP 0010.scaffold00043 357922 1 C T scaffold905 ScafM SNP 0010.scaffold00043 357925 1 C T scaffold905 ScafM SNP 0010.scaffold00043 357940 1 A G scaffold905 ScafM SNP 0010.scaffold00043 357984 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 357999 1 . T scaffold905 ScafM SNP 0010.scaffold00043 358046 1 C G scaffold905 ScafM SNP 0010.scaffold00043 358048 1 T A scaffold905 ScafM SNP 0010.scaffold00043 358141 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 358167 4 ATGT .... scaffold905 Both SNP 0010.scaffold00043 358259 1 T C scaffold905 Both SNP 0010.scaffold00043 358274 1 A G scaffold905 Both SNP 0010.scaffold00043 358320 1 C T scaffold905 Both SNP 0010.scaffold00043 358341 1 G A scaffold905 Both SNP 0010.scaffold00043 358384 1 C T scaffold905 Both SNP 0010.scaffold00043 358430 1 T G scaffold905 Both SNP 0010.scaffold00043 358487 1 T A scaffold905 ScafM SNP 0010.scaffold00043 358724 1 C T scaffold905 ScafM SNP 0010.scaffold00043 358750 1 A G scaffold905 ScafM SNP 0010.scaffold00043 358758 1 A G scaffold905 Both SNP 0010.scaffold00043 358797 1 C A scaffold905 Both SNP 0010.scaffold00043 358809 1 C G scaffold905 Both SNP 0010.scaffold00043 358966 1 T C scaffold905 Both SNP 0010.scaffold00043 358999 1 A G scaffold905 ReadM SNP 0010.scaffold00043 359234 1 A G - ReadM SNP 0010.scaffold00043 359252 1 G A - ReadM SNP 0010.scaffold00043 359490 1 T C - ReadM SNP 0010.scaffold00043 359521 1 A G - ScafM SNP 0010.scaffold00043 359990 1 G C scaffold905 ScafM SNP 0010.scaffold00043 360097 1 C T scaffold905 ScafM SNP 0010.scaffold00043 360124 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 360128 2 TT .. scaffold905 ScafM INDEL 0010.scaffold00043 360154 1 A . scaffold905 ScafM SNP 0010.scaffold00043 360380 1 C T scaffold905 ScafM SNP 0010.scaffold00043 360382 1 A G scaffold905 ReadM SNP 0010.scaffold00043 360447 1 A T - ReadM SNP 0010.scaffold00043 360510 1 G A - Both SNP 0010.scaffold00043 360668 1 C A scaffold905 ReadM SNP 0010.scaffold00043 360842 1 C T - ScafM SNP 0010.scaffold00043 361202 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361262 1 C T scaffold905 ScafM SNP 0010.scaffold00043 361273 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361283 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361335 1 G A scaffold905 ReadM SNP 0010.scaffold00043 361423 1 G A - ReadM SNP 0010.scaffold00043 361474 1 A G - ReadM INDEL 0010.scaffold00043 361528 1 . A - ScafM SNP 0010.scaffold00043 361611 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361661 1 C T scaffold905 ScafM SNP 0010.scaffold00043 361671 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361678 1 C T scaffold905 ScafM SNP 0010.scaffold00043 361680 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 361689 1 A . scaffold905 ScafM SNP 0010.scaffold00043 361696 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 361699 1 . A scaffold905 ScafM INDEL 0010.scaffold00043 361706 3 ... GAG scaffold905 ScafM SNP 0010.scaffold00043 361718 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361734 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361755 1 C G scaffold905 ScafM SNP 0010.scaffold00043 361758 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361771 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361774 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 361775 2 .. AA scaffold905 ScafM SNP 0010.scaffold00043 361776 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361787 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 361801 3 GAG ... scaffold905 ScafM INDEL 0010.scaffold00043 361806 5 AAATG ..... scaffold905 ScafM SNP 0010.scaffold00043 361835 1 G T scaffold905 ScafM SNP 0010.scaffold00043 361844 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361861 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361866 1 G A scaffold905 ScafM SNP 0010.scaffold00043 361895 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361905 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361911 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361941 1 G T scaffold905 ScafM SNP 0010.scaffold00043 361951 1 T C scaffold905 ScafM SNP 0010.scaffold00043 361959 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361961 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361977 1 A G scaffold905 ScafM SNP 0010.scaffold00043 361991 1 C T scaffold905 ScafM SNP 0010.scaffold00043 361997 1 G A scaffold905 ScafM SNP 0010.scaffold00043 362004 1 C T scaffold905 ScafM SNP 0010.scaffold00043 362009 1 T A scaffold905 ScafM SNP 0010.scaffold00043 362016 1 G A scaffold905 ScafM SNP 0010.scaffold00043 362038 1 G A scaffold905 ScafM SNP 0010.scaffold00043 362040 1 C T scaffold905 ScafM SNP 0010.scaffold00043 362047 1 G T scaffold905 ScafM SNP 0010.scaffold00043 362057 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 362061 1 . C scaffold905 ScafM SNP 0010.scaffold00043 362064 2 GT TC scaffold905 ScafM SNP 0010.scaffold00043 362068 1 A G scaffold905 ScafM SNP 0010.scaffold00043 362078 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 362431 3 ... ATA scaffold905 ScafM SNP 0010.scaffold00043 362473 1 G A scaffold905 Both INDEL 0010.scaffold00043 362543 1 . C scaffold905 ScafM SNP 0010.scaffold00043 363178 1 A T scaffold905 ScafM SNP 0010.scaffold00043 363201 1 C T scaffold905 ScafM SNP 0010.scaffold00043 363283 1 G A scaffold905 ScafM SNP 0010.scaffold00043 363332 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 363414 1 A . scaffold905 ScafM SNP 0010.scaffold00043 363433 1 A G scaffold905 ReadM SNP 0010.scaffold00043 363564 1 C T - Both SNP 0010.scaffold00043 363944 1 T C scaffold905 Both SNP 0010.scaffold00043 364018 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 364126 1 . G scaffold905 ScafM SNP 0010.scaffold00043 364294 1 C T scaffold905 ScafM SNP 0010.scaffold00043 364364 1 A G scaffold905 ScafM SNP 0010.scaffold00043 364374 1 C T scaffold905 ScafM SNP 0010.scaffold00043 364414 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 364458 4 TATA .... scaffold905 ScafM SNP 0010.scaffold00043 364587 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 364594 1 A . scaffold905 ScafM SNP 0010.scaffold00043 364603 1 A C scaffold905 ScafM SNP 0010.scaffold00043 364628 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 364636 8 TCTTTACC ........ scaffold905 ScafM SNP 0010.scaffold00043 364679 1 T A scaffold905 ScafM SNP 0010.scaffold00043 364687 1 G A scaffold905 ScafM SNP 0010.scaffold00043 364937 1 A G scaffold905 Both SNP 0010.scaffold00043 365158 1 C T scaffold905 Both INDEL 0010.scaffold00043 365548 2 .. AA scaffold905 Both SNP 0010.scaffold00043 365661 1 T A scaffold905 Both SNP 0010.scaffold00043 365776 1 A T scaffold905 Both SNP 0010.scaffold00043 365804 1 T C scaffold905 ScafM SNP 0010.scaffold00043 365818 1 C T scaffold905 ScafM SNP 0010.scaffold00043 365834 1 T C scaffold905 ScafM SNP 0010.scaffold00043 365889 1 C G scaffold905 ScafM SNP 0010.scaffold00043 365903 1 A T scaffold905 ScafM SNP 0010.scaffold00043 365905 1 T G scaffold905 ScafM SNP 0010.scaffold00043 365928 1 A C scaffold905 ReadM SNP 0010.scaffold00043 366261 1 A G - Both SNP 0010.scaffold00043 366303 1 T C scaffold905 ScafM SNP 0010.scaffold00043 366367 1 G A scaffold905 ScafM SNP 0010.scaffold00043 366377 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 366498 1 T . scaffold905 ScafM SNP 0010.scaffold00043 366566 1 A T scaffold905 ScafM SNP 0010.scaffold00043 366577 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 366585 2 .. AT scaffold905 ScafM SNP 0010.scaffold00043 366595 1 C A scaffold905 ScafM SNP 0010.scaffold00043 366625 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 366823 7 GATTTAG ....... scaffold905 ScafM SNP 0010.scaffold00043 366842 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 366850 4 .... TAAT scaffold905 ScafM SNP 0010.scaffold00043 366855 1 C T scaffold905 ScafM SNP 0010.scaffold00043 366881 1 C A scaffold905 ScafM SNP 0010.scaffold00043 366913 1 T C scaffold905 ScafM SNP 0010.scaffold00043 367043 2 CG TA scaffold905 ScafM SNP 0010.scaffold00043 367054 1 G T scaffold905 ScafM SNP 0010.scaffold00043 367064 1 T C scaffold905 ScafM SNP 0010.scaffold00043 367082 1 G A scaffold905 ScafM SNP 0010.scaffold00043 367086 1 C T scaffold905 ScafM SNP 0010.scaffold00043 367092 1 T A scaffold905 ScafM SNP 0010.scaffold00043 367096 1 C T scaffold905 Both SNP 0010.scaffold00043 367138 1 C T scaffold905 Both SNP 0010.scaffold00043 367194 1 A T scaffold905 Both SNP 0010.scaffold00043 367220 1 G A scaffold905 ScafM SNP 0010.scaffold00043 367294 1 A G scaffold905 ScafM SNP 0010.scaffold00043 367298 1 G A scaffold905 ScafM SNP 0010.scaffold00043 367305 1 A G scaffold905 ScafM SNP 0010.scaffold00043 367314 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 367699 1 A . scaffold905 ScafM SNP 0010.scaffold00043 368556 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 368613 1 T . scaffold905 Both SNP 0010.scaffold00043 368962 1 T C scaffold905 Both SNP 0010.scaffold00043 368968 1 T C scaffold905 Both SNP 0010.scaffold00043 369294 1 A G scaffold905 Both SNP 0010.scaffold00043 369345 1 A G scaffold905 Both SNP 0010.scaffold00043 369360 1 C T scaffold905 Both SNP 0010.scaffold00043 369440 1 C T scaffold905 Both SNP 0010.scaffold00043 369502 1 G A scaffold905 ScafM SNP 0010.scaffold00043 369527 1 A G scaffold905 ScafM SNP 0010.scaffold00043 369530 1 A G scaffold905 ScafM SNP 0010.scaffold00043 369715 1 A C scaffold905 Both SNP 0010.scaffold00043 369741 1 T C scaffold905 Both SNP 0010.scaffold00043 370363 1 T C scaffold905 Both SNP 0010.scaffold00043 370392 1 T C scaffold905 ReadM SNP 0010.scaffold00043 370567 1 A T - Both SNP 0010.scaffold00043 371148 1 C T scaffold905 Both SNP 0010.scaffold00043 371154 1 C T scaffold905 ReadM SNP 0010.scaffold00043 372369 1 C T - Both SNP 0010.scaffold00043 372690 1 A G scaffold905 Both SNP 0010.scaffold00043 372774 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 372839 4 .... CAAA scaffold905 Both SNP 0010.scaffold00043 372892 1 C T scaffold905 Both SNP 0010.scaffold00043 372897 1 C G scaffold905 ScafM SNP 0010.scaffold00043 373080 1 C T scaffold905 ScafM SNP 0010.scaffold00043 373098 2 AC GA scaffold905 ScafM SNP 0010.scaffold00043 373113 2 TT CC scaffold905 ScafM SNP 0010.scaffold00043 373118 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 373134 16 ................ AGTGGATTTCTGTTTA scaffold905 ScafM SNP 0010.scaffold00043 373156 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 373159 1 T . scaffold905 ScafM SNP 0010.scaffold00043 373179 1 T C scaffold905 Both SNP 0010.scaffold00043 373206 1 A G scaffold905 Both SNP 0010.scaffold00043 373331 1 G A scaffold905 Both SNP 0010.scaffold00043 373338 1 A G scaffold905 Both INDEL 0010.scaffold00043 373398 1 T . scaffold905 Both SNP 0010.scaffold00043 373498 1 A C scaffold905 Both SNP 0010.scaffold00043 373567 1 A G scaffold905 Both INDEL 0010.scaffold00043 373592 1 . C scaffold905 Both SNP 0010.scaffold00043 373637 1 G C scaffold905 Both SNP 0010.scaffold00043 373646 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 373699 11 AAGCTAATATC ........... scaffold905 ScafM INDEL 0010.scaffold00043 373712 1 C . scaffold905 ScafM SNP 0010.scaffold00043 373808 1 C G scaffold905 ScafM SNP 0010.scaffold00043 373811 1 A C scaffold905 Both SNP 0010.scaffold00043 373833 1 A G scaffold905 Both INDEL 0010.scaffold00043 374013 3 ... GAG scaffold905 Both SNP 0010.scaffold00043 374231 1 T C scaffold905 ScafM SNP 0010.scaffold00043 374258 2 CT GC scaffold905 Both SNP 0010.scaffold00043 374282 1 C A scaffold905 ReadM SNP 0010.scaffold00043 374298 1 A G - Both SNP 0010.scaffold00043 374397 1 C T scaffold905 Both SNP 0010.scaffold00043 374454 1 C A scaffold905 Both SNP 0010.scaffold00043 374522 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 374834 46 CAGGGACGAAGATATTTATATGATCCAGTGAAGCCACTAATATATA .............................................. scaffold905 Both INDEL 0010.scaffold00043 375316 1 T . scaffold905 Both SNP 0010.scaffold00043 375502 1 A G scaffold905 Both SNP 0010.scaffold00043 375592 1 G A scaffold905 Both SNP 0010.scaffold00043 375731 1 G A scaffold905 Both SNP 0010.scaffold00043 376051 1 G A scaffold905 Both SNP 0010.scaffold00043 376081 1 C T scaffold905 Both SNP 0010.scaffold00043 376307 1 A G scaffold905 Both SNP 0010.scaffold00043 376379 1 G A scaffold905 ScafM SNP 0010.scaffold00043 376512 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 376646 4 .... AGAC scaffold905 Both SNP 0010.scaffold00043 376713 1 T C scaffold905 Both SNP 0010.scaffold00043 376748 1 G A scaffold905 Both SNP 0010.scaffold00043 376814 1 C A scaffold905 Both SNP 0010.scaffold00043 376919 1 A C scaffold905 Both SNP 0010.scaffold00043 376995 1 G A scaffold905 Both INDEL 0010.scaffold00043 377000 2 .. AT scaffold905 Both SNP 0010.scaffold00043 377078 1 C G scaffold905 Both INDEL 0010.scaffold00043 377164 1 . T scaffold905 Both SNP 0010.scaffold00043 377304 1 A T scaffold905 Both SNP 0010.scaffold00043 377324 1 G A scaffold905 ScafM SNP 0010.scaffold00043 377431 2 TA AG scaffold905 Both SNP 0010.scaffold00043 377577 1 T G scaffold905 Both SNP 0010.scaffold00043 377624 1 G A scaffold905 Both SNP 0010.scaffold00043 377829 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 378070 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 378509 1 C . scaffold905 ScafM SNP 0010.scaffold00043 378512 2 TC GA scaffold905 ScafM SNP 0010.scaffold00043 378515 1 C G scaffold905 ScafM INDEL 0010.scaffold00043 378517 1 A . scaffold905 ScafM SNP 0010.scaffold00043 378522 4 AGAA TTGG scaffold905 ScafM SNP 0010.scaffold00043 378529 3 TGT CTA scaffold905 ScafM INDEL 0010.scaffold00043 378535 3 ... GGG scaffold905 ScafM INDEL 0010.scaffold00043 378536 2 .. GG scaffold905 ScafM SNP 0010.scaffold00043 378540 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 378543 3 CCC .GA scaffold905 ScafM SNP 0010.scaffold00043 378547 1 G C scaffold905 ScafM SNP 0010.scaffold00043 378549 2 GA TC scaffold905 ScafM SNP 0010.scaffold00043 378557 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 378573 6 ...... CCCAAA scaffold905 ScafM SNP 0010.scaffold00043 378693 1 C G scaffold905 ScafM SNP 0010.scaffold00043 379009 1 A G scaffold905 ScafM SNP 0010.scaffold00043 379018 1 C A scaffold905 ScafM SNP 0010.scaffold00043 379037 1 C T scaffold905 Both SNP 0010.scaffold00043 379325 1 T C scaffold905 ScafM SNP 0010.scaffold00043 379409 1 C A scaffold905 ScafM INDEL 0010.scaffold00043 379421 4 TTTG .... scaffold905 ScafM INDEL 0010.scaffold00043 379435 1 . C scaffold905 ScafM INDEL 0010.scaffold00043 379441 2 CA .. scaffold905 ScafM INDEL 0010.scaffold00043 379444 1 C . scaffold905 ScafM INDEL 0010.scaffold00043 379448 1 T . scaffold905 ScafM SNP 0010.scaffold00043 379450 1 A C scaffold905 ScafM SNP 0010.scaffold00043 379452 3 CGT AAA scaffold905 ScafM SNP 0010.scaffold00043 379456 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 379458 1 T . scaffold905 ScafM SNP 0010.scaffold00043 379460 1 T A scaffold905 ScafM SNP 0010.scaffold00043 379462 1 G A scaffold905 ScafM SNP 0010.scaffold00043 379464 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 379467 2 TA .G scaffold905 ScafM SNP 0010.scaffold00043 379471 1 G T scaffold905 ScafM SNP 0010.scaffold00043 379473 1 T A scaffold905 ScafM SNP 0010.scaffold00043 379475 1 A T scaffold905 ScafM SNP 0010.scaffold00043 379477 1 T G scaffold905 ScafM INDEL 0010.scaffold00043 379480 1 G . scaffold905 ScafM SNP 0010.scaffold00043 379482 1 T C scaffold905 ScafM SNP 0010.scaffold00043 379485 3 GTT CAA scaffold905 ScafM INDEL 0010.scaffold00043 379492 2 TG .. scaffold905 ScafM SNP 0010.scaffold00043 379495 2 TC CG scaffold905 ScafM SNP 0010.scaffold00043 379498 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 379501 1 A . scaffold905 ScafM SNP 0010.scaffold00043 379505 2 AC GG scaffold905 ScafM INDEL 0010.scaffold00043 379508 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 379510 1 A . scaffold905 ScafM SNP 0010.scaffold00043 379512 2 TC AT scaffold905 ScafM INDEL 0010.scaffold00043 379517 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 379519 4 AAGA ..TT scaffold905 ScafM INDEL 0010.scaffold00043 379527 5 GGGAC ..... scaffold905 ScafM SNP 0010.scaffold00043 379534 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 379538 1 T . scaffold905 Both SNP 0010.scaffold00043 379563 1 A C scaffold905 Both SNP 0010.scaffold00043 379604 1 T C scaffold905 Both SNP 0010.scaffold00043 379658 1 G A scaffold905 Both SNP 0010.scaffold00043 379946 1 A C scaffold905 Both SNP 0010.scaffold00043 379951 1 C T scaffold905 Both SNP 0010.scaffold00043 379960 1 A C scaffold905 ScafM SNP 0010.scaffold00043 380061 1 T C scaffold905 ScafM SNP 0010.scaffold00043 380089 1 G A scaffold905 ScafM SNP 0010.scaffold00043 380116 1 C T scaffold905 ScafM SNP 0010.scaffold00043 380119 1 A C scaffold905 ScafM SNP 0010.scaffold00043 380482 2 GA AG scaffold905 ScafM SNP 0010.scaffold00043 380525 1 G C scaffold905 ScafM INDEL 0010.scaffold00043 380565 2 AC .. scaffold905 ScafM INDEL 0010.scaffold00043 380570 2 TC .. scaffold905 ScafM SNP 0010.scaffold00043 380591 1 C T scaffold905 ScafM SNP 0010.scaffold00043 380598 1 G T scaffold905 ScafM SNP 0010.scaffold00043 380606 1 C T scaffold905 ScafM SNP 0010.scaffold00043 380685 1 A G scaffold905 ScafM SNP 0010.scaffold00043 380759 2 AG GA scaffold905 ReadM INDEL 0010.scaffold00043 380808 1 . C - ReadM SNP 0010.scaffold00043 381031 1 C T - ScafM SNP 0010.scaffold00043 381923 1 G C scaffold905 ScafM INDEL 0010.scaffold00043 381926 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 382008 8 ........ CATCACCC scaffold905 ScafM SNP 0010.scaffold00043 382010 1 T C scaffold905 ScafM SNP 0010.scaffold00043 382012 1 T A scaffold905 ScafM SNP 0010.scaffold00043 382014 2 TT AA scaffold905 ScafM SNP 0010.scaffold00043 382017 1 C A scaffold905 ScafM SNP 0010.scaffold00043 382019 2 TC AA scaffold905 ScafM INDEL 0010.scaffold00043 382021 9 ......... AAAAAAAAA scaffold905 ScafM SNP 0010.scaffold00043 382024 3 CGC AAA scaffold905 Both SNP 0010.scaffold00043 382607 1 T C scaffold905 Both SNP 0010.scaffold00043 382783 1 C T scaffold905 Both SNP 0010.scaffold00043 382840 1 G T scaffold905 Both SNP 0010.scaffold00043 383316 1 T C scaffold905 Both SNP 0010.scaffold00043 383358 1 G T scaffold905 ScafM INDEL 0010.scaffold00043 383535 8 TCTTCTTG ........ scaffold905 Both SNP 0010.scaffold00043 384147 1 T A scaffold905 ReadM SNP 0010.scaffold00043 384309 1 A G - ScafM SNP 0010.scaffold00043 384552 1 G C scaffold905 Both SNP 0010.scaffold00043 384595 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 384636 11 ........... GTTGGGGGGGG scaffold905 Both SNP 0010.scaffold00043 384735 1 C A scaffold905 Both SNP 0010.scaffold00043 384788 1 C T scaffold905 Both SNP 0010.scaffold00043 384868 1 C T scaffold905 Both INDEL 0010.scaffold00043 385119 2 AA .. scaffold905 Both INDEL 0010.scaffold00043 385247 2 .. CA scaffold905 Both SNP 0010.scaffold00043 385396 1 A G scaffold905 Both SNP 0010.scaffold00043 385452 1 T C scaffold905 Both SNP 0010.scaffold00043 385550 1 T G scaffold905 Both INDEL 0010.scaffold00043 385581 1 A . scaffold905 Both SNP 0010.scaffold00043 385980 1 A T scaffold905 Both SNP 0010.scaffold00043 386350 1 T A scaffold905 Both SNP 0010.scaffold00043 386405 1 G A scaffold905 Both INDEL 0010.scaffold00043 386468 1 . A scaffold905 Both SNP 0010.scaffold00043 386663 1 A T scaffold905 Both SNP 0010.scaffold00043 386726 1 T A scaffold905 Both SNP 0010.scaffold00043 386788 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 386848 8 TGCATCGG ........ scaffold905 Both SNP 0010.scaffold00043 387017 1 A T scaffold905 ScafM INDEL 0010.scaffold00043 388072 4 CCTT .... scaffold905 Both SNP 0010.scaffold00043 388214 1 A G scaffold905 Both SNP 0010.scaffold00043 388368 1 A T scaffold905 Both SNP 0010.scaffold00043 388501 1 A C scaffold905 ScafM INDEL 0010.scaffold00043 388563 13 ............. GTAATGGCACTAA scaffold905 ScafM SNP 0010.scaffold00043 388598 1 A T scaffold905 ReadM SNP 0010.scaffold00043 388625 1 G A - Both SNP 0010.scaffold00043 388847 1 G A scaffold905 Both SNP 0010.scaffold00043 389105 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 389439 1 . T scaffold905 ScafM SNP 0010.scaffold00043 389442 1 A T scaffold905 ScafM SNP 0010.scaffold00043 389466 1 T A scaffold905 ScafM SNP 0010.scaffold00043 389610 1 T A scaffold905 ScafM SNP 0010.scaffold00043 389638 1 T G scaffold905 ScafM SNP 0010.scaffold00043 389661 1 C T scaffold905 ScafM SNP 0010.scaffold00043 389669 1 G A scaffold905 ScafM SNP 0010.scaffold00043 389686 1 T C scaffold905 ScafM SNP 0010.scaffold00043 389699 1 G A scaffold905 ScafM INDEL 0010.scaffold00043 389703 1 . A scaffold905 Both SNP 0010.scaffold00043 389816 1 C T scaffold905 Both SNP 0010.scaffold00043 389827 1 A G scaffold905 Both INDEL 0010.scaffold00043 389857 1 A . scaffold905 ScafM SNP 0010.scaffold00043 389918 1 A G scaffold905 ScafM SNP 0010.scaffold00043 390021 1 A T scaffold905 ScafM SNP 0010.scaffold00043 390131 1 T C scaffold905 ScafM SNP 0010.scaffold00043 390145 1 T A scaffold905 ScafM INDEL 0010.scaffold00043 390152 2 .. AC scaffold905 ScafM INDEL 0010.scaffold00043 390178 1 T . scaffold905 ScafM INDEL 0010.scaffold00043 390189 6 TGACAC ...... scaffold905 ScafM SNP 0010.scaffold00043 390254 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 390305 4 .... CAAA scaffold905 ScafM INDEL 0010.scaffold00043 390308 2 .. TT scaffold905 ScafM INDEL 0010.scaffold00043 390324 1 . T scaffold905 ScafM SNP 0010.scaffold00043 390465 2 CT AG scaffold905 ScafM SNP 0010.scaffold00043 390478 2 TT CC scaffold905 ScafM INDEL 0010.scaffold00043 390494 3 TAC ... scaffold905 ScafM SNP 0010.scaffold00043 390505 1 T C scaffold905 ScafM SNP 0010.scaffold00043 390631 1 C T scaffold905 ScafM INDEL 0010.scaffold00043 390636 1 . A scaffold905 ScafM SNP 0010.scaffold00043 390650 1 G A scaffold905 ScafM SNP 0010.scaffold00043 390677 1 T C scaffold905 ScafM SNP 0010.scaffold00043 390689 1 A G scaffold905 ScafM SNP 0010.scaffold00043 390699 1 A T scaffold905 Both SNP 0010.scaffold00043 390979 1 T C scaffold905 Both SNP 0010.scaffold00043 390990 1 T C scaffold905 Both SNP 0010.scaffold00043 391600 1 A G scaffold905 Both SNP 0010.scaffold00043 391892 1 A G scaffold905 Both SNP 0010.scaffold00043 391926 1 G T scaffold905 ReadM SNP 0010.scaffold00043 392341 1 T C - ReadM SNP 0010.scaffold00043 392454 1 A G - ScafM SNP 0010.scaffold00043 392687 2 CA AG scaffold905 Both SNP 0010.scaffold00043 392876 1 T G scaffold905 ReadM SNP 0010.scaffold00043 393163 1 C T - ReadM SNP 0010.scaffold00043 393231 1 C T - ReadM SNP 0010.scaffold00043 393289 1 C G - ScafM INDEL 0010.scaffold00043 393325 30 .............................. TGAGGAGGAGGAAGTGGATGATGATGATGA scaffold905 Both SNP 0010.scaffold00043 393473 1 C T scaffold905 Both SNP 0010.scaffold00043 393541 1 T A scaffold905 ReadM SNP 0010.scaffold00043 393677 1 A T - ReadM SNP 0010.scaffold00043 393691 1 A G - ReadM SNP 0010.scaffold00043 393787 1 G A - ReadM SNP 0010.scaffold00043 393903 1 C T - ReadM SNP 0010.scaffold00043 393973 1 G T - ReadM SNP 0010.scaffold00043 394055 1 A T - ReadM SNP 0010.scaffold00043 394422 1 A G - Both SNP 0010.scaffold00043 394523 1 A G scaffold905 Both SNP 0010.scaffold00043 394662 1 T C scaffold905 Both SNP 0010.scaffold00043 394848 1 C T scaffold905 Both SNP 0010.scaffold00043 394858 1 T C scaffold905 Both SNP 0010.scaffold00043 394888 1 C T scaffold905 Both SNP 0010.scaffold00043 394989 1 A T scaffold905 Both SNP 0010.scaffold00043 395063 1 T C scaffold905 ReadM SNP 0010.scaffold00043 395196 1 A G - Both SNP 0010.scaffold00043 395367 1 A G scaffold905 ScafM SNP 0010.scaffold00043 395399 1 C T scaffold905 ScafM SNP 0010.scaffold00043 395406 1 T A scaffold905 ScafM SNP 0010.scaffold00043 395421 1 A G scaffold905 ScafM SNP 0010.scaffold00043 395423 1 G T scaffold905 ScafM SNP 0010.scaffold00043 395435 1 A G scaffold905 ScafM SNP 0010.scaffold00043 395438 1 T G scaffold905 ScafM SNP 0010.scaffold00043 395441 1 A G scaffold905 Both SNP 0010.scaffold00043 395486 1 T C scaffold905 Both SNP 0010.scaffold00043 395537 1 A G scaffold905 ScafM SNP 0010.scaffold00043 395624 1 T C scaffold905 ScafM SNP 0010.scaffold00043 395627 1 C A scaffold905 ScafM SNP 0010.scaffold00043 395630 1 T C scaffold905 ScafM SNP 0010.scaffold00043 395653 2 TC CT scaffold905 ScafM SNP 0010.scaffold00043 395661 1 G A scaffold905 ScafM SNP 0010.scaffold00043 395675 2 TC CA scaffold905 ScafM SNP 0010.scaffold00043 395690 1 A G scaffold905 ScafM SNP 0010.scaffold00043 395711 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 395726 4 .... GTAT scaffold905 ScafM INDEL 0010.scaffold00043 395735 2 .. AT scaffold905 ScafM SNP 0010.scaffold00043 395743 1 G A scaffold905 ScafM SNP 0010.scaffold00043 395759 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 395816 8 ........ ACAGTAGC scaffold905 ScafM INDEL 0010.scaffold00043 395824 1 G . scaffold905 ScafM INDEL 0010.scaffold00043 395834 3 TAG ... scaffold905 ScafM SNP 0010.scaffold00043 395994 1 T C scaffold905 ScafM SNP 0010.scaffold00043 396000 1 C T scaffold905 ScafM SNP 0010.scaffold00043 396025 1 G A scaffold905 ScafM SNP 0010.scaffold00043 396054 1 A T scaffold905 ScafM SNP 0010.scaffold00043 396072 1 T C scaffold905 Both SNP 0010.scaffold00043 396115 1 T G scaffold905 Both SNP 0010.scaffold00043 396195 1 T C scaffold905 ReadM SNP 0010.scaffold00043 397217 1 A C - ScafM INDEL 0010.scaffold00043 397372 1 . A scaffold905 ScafM SNP 0010.scaffold00043 397374 1 G A scaffold905 ScafM SNP 0010.scaffold00043 397443 1 T C scaffold905 ScafM SNP 0010.scaffold00043 397465 1 G A scaffold905 ScafM SNP 0010.scaffold00043 397471 1 C T scaffold905 ScafM SNP 0010.scaffold00043 397480 1 T C scaffold905 ScafM SNP 0010.scaffold00043 397488 1 A C scaffold905 ScafM SNP 0010.scaffold00043 397508 1 G A scaffold905 ScafM SNP 0010.scaffold00043 397533 1 C T scaffold905 ScafM SNP 0010.scaffold00043 397535 1 T C scaffold905 ScafM SNP 0010.scaffold00043 397537 1 A G scaffold905 ScafM INDEL 0010.scaffold00043 397561 1 . T scaffold905 Both SNP 0010.scaffold00043 397643 1 T C scaffold905 ScafM INDEL 0010.scaffold00043 397724 51 TGAATTGGAGTAAAGATAATGGTAATTTTAAGGTGTTTGATACTTCTCCTG ................................................... scaffold905 ScafM INDEL 0010.scaffold00043 397778 9 TTGCGCAAG ......... scaffold905 Both INDEL 0010.scaffold00043 397845 1 G . scaffold905 Both INDEL 0010.scaffold00043 397928 1 . A scaffold905 Both SNP 0010.scaffold00043 397947 1 G C scaffold905 ScafM SNP 0010.scaffold00043 398020 2 CA TC scaffold905 ScafM INDEL 0010.scaffold00043 398029 9 CAATCCCAC ......... scaffold905 ScafM INDEL 0010.scaffold00043 398059 1 C . scaffold905 ScafM INDEL 0010.scaffold00043 398061 1 A . scaffold905 ScafM INDEL 0010.scaffold00043 398063 1 C . scaffold905 Both INDEL 0010.scaffold00043 398093 1 . A scaffold905 ScafM SNP 0011.scaffold00043 149 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 325 1 A G scaffold3425 Both SNP 0011.scaffold00043 426 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 513 1 A G scaffold3425 Both SNP 0011.scaffold00043 570 1 T G scaffold3425 Both SNP 0011.scaffold00043 748 1 A G scaffold3425 Both SNP 0011.scaffold00043 918 1 T C scaffold3425 Both SNP 0011.scaffold00043 936 1 T G scaffold3425 ReadM SNP 0011.scaffold00043 1384 1 T C - ReadM SNP 0011.scaffold00043 1494 1 C A - ReadM SNP 0011.scaffold00043 1635 1 C A - Both SNP 0011.scaffold00043 1665 1 A G scaffold3425 Both SNP 0011.scaffold00043 1673 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 1741 2 AA TT scaffold3425 Both INDEL 0011.scaffold00043 1751 1 T . scaffold3425 ReadM SNP 0011.scaffold00043 1896 1 C T - ReadM SNP 0011.scaffold00043 2033 1 G C - ScafM SNP 0011.scaffold00043 2490 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 2785 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 2829 2 TG CT scaffold3425 ScafM SNP 0011.scaffold00043 2848 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 2870 1 A C scaffold3425 ScafM INDEL 0011.scaffold00043 6614 2 CA .. scaffold3425 ScafM INDEL 0011.scaffold00043 6617 3 TTC ... scaffold3425 ScafM SNP 0011.scaffold00043 6621 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 6855 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 6864 1 T G scaffold3425 ScafM SNP 0011.scaffold00043 6872 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 6878 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 7660 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 7666 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 7670 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 7695 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 7699 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 7703 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 7714 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 7740 1 A G scaffold3425 ReadM SNP 0011.scaffold00043 7926 1 A G - ReadM SNP 0011.scaffold00043 8191 1 T C - ReadM INDEL 0011.scaffold00043 8221 1 . T - ReadM SNP 0011.scaffold00043 8284 1 G T - ReadM SNP 0011.scaffold00043 8401 1 T C - ScafM SNP 0011.scaffold00043 8640 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 8650 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 8658 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 8664 1 G A scaffold3425 Both SNP 0011.scaffold00043 8955 1 A G scaffold3425 ReadM SNP 0011.scaffold00043 9066 1 G A - Both SNP 0011.scaffold00043 9286 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 9447 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 9509 1 G T scaffold3425 ScafM INDEL 0011.scaffold00043 9653 3 ... AAA scaffold3425 ScafM INDEL 0011.scaffold00043 9667 2 .. AA scaffold3425 ScafM INDEL 0011.scaffold00043 9855 3 AGT ... scaffold3425 ScafM SNP 0011.scaffold00043 9871 1 C T scaffold3425 ScafM INDEL 0011.scaffold00043 9893 2 TT .. scaffold3425 ScafM SNP 0011.scaffold00043 9984 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 10011 1 C . scaffold3425 ScafM INDEL 0011.scaffold00043 10013 1 A . scaffold3425 ScafM INDEL 0011.scaffold00043 10015 1 A . scaffold3425 Both SNP 0011.scaffold00043 10102 1 A G scaffold3425 Both SNP 0011.scaffold00043 10123 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 10396 1 C T scaffold3425 ScafM INDEL 0011.scaffold00043 10462 6 ...... AAATTG scaffold3425 Both SNP 0011.scaffold00043 10496 1 A G scaffold3425 ScafM INDEL 0011.scaffold00043 10628 2 CT .. scaffold3425 ScafM INDEL 0011.scaffold00043 10641 2 AC .. scaffold3425 ScafM INDEL 0011.scaffold00043 10645 2 TT .. scaffold3425 ScafM INDEL 0011.scaffold00043 10648 1 A . scaffold3425 ScafM INDEL 0011.scaffold00043 10650 1 A . scaffold3425 ScafM SNP 0011.scaffold00043 10666 1 C T scaffold3425 ScafM INDEL 0011.scaffold00043 10668 1 . G scaffold3425 ScafM SNP 0011.scaffold00043 10678 2 AA GG scaffold3425 Both SNP 0011.scaffold00043 10866 1 G A scaffold3425 Both SNP 0011.scaffold00043 10897 1 A C scaffold3425 ScafM INDEL 0011.scaffold00043 10909 9 CTCTTTTTC ......... scaffold3425 ScafM SNP 0011.scaffold00043 10937 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 10974 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 10987 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 11010 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 11037 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 11058 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 11061 2 CC AA scaffold3425 ScafM SNP 0011.scaffold00043 11064 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 11079 1 T A scaffold3425 ScafM INDEL 0011.scaffold00043 11085 3 ... ATA scaffold3425 ScafM SNP 0011.scaffold00043 11110 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 11121 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 11150 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 11154 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 11157 1 A C scaffold3425 ScafM INDEL 0011.scaffold00043 11191 8 ........ AGTCTTGT scaffold3425 ScafM SNP 0011.scaffold00043 11227 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 11238 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 11260 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 11288 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 11315 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 11328 1 C G scaffold3425 ScafM SNP 0011.scaffold00043 11330 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 11340 1 T A scaffold3425 ReadM SNP 0011.scaffold00043 11419 1 T C - ReadM SNP 0011.scaffold00043 11506 1 G A - ReadM INDEL 0011.scaffold00043 11633 2 .. AA - Both SNP 0011.scaffold00043 11697 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 11753 2 .. TT scaffold3425 Both SNP 0011.scaffold00043 11921 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 12028 1 T A scaffold3425 Both INDEL 0011.scaffold00043 12029 1 . C scaffold3425 Both SNP 0011.scaffold00043 12106 1 C T scaffold3425 Both INDEL 0011.scaffold00043 12208 2 .. TT scaffold3425 ScafM SNP 0011.scaffold00043 12240 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 12252 4 .... TTTG scaffold3425 ReadM SNP 0011.scaffold00043 12352 1 C T - ReadM SNP 0011.scaffold00043 12364 1 T C - ReadM SNP 0011.scaffold00043 12472 1 T A - ReadM SNP 0011.scaffold00043 12480 1 C A - ReadM SNP 0011.scaffold00043 12512 1 C T - Both SNP 0011.scaffold00043 12612 1 A C scaffold3425 Both SNP 0011.scaffold00043 12784 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 12840 1 A C scaffold3425 Both INDEL 0011.scaffold00043 12976 1 T . scaffold3425 ScafM SNP 0011.scaffold00043 12986 1 T A scaffold3425 Both SNP 0011.scaffold00043 13698 1 A C scaffold3425 Both SNP 0011.scaffold00043 13757 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 13815 1 G A scaffold3425 Both SNP 0011.scaffold00043 13945 1 C A scaffold3425 Both SNP 0011.scaffold00043 13983 1 G A scaffold3425 Both SNP 0011.scaffold00043 14075 1 A C scaffold3425 Both SNP 0011.scaffold00043 14513 1 T G scaffold3425 Both SNP 0011.scaffold00043 14570 1 A T scaffold3425 Both SNP 0011.scaffold00043 14628 1 T G scaffold3425 ScafM INDEL 0011.scaffold00043 14635 30 .............................. TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold3425 ScafM SNP 0011.scaffold00043 14649 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 14669 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 14676 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 14710 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 14725 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 14763 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 14781 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 14789 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 14793 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 14804 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 14832 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 14844 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 14848 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 14856 1 C A scaffold3425 Both SNP 0011.scaffold00043 14891 1 A G scaffold3425 Both INDEL 0011.scaffold00043 15074 1 G . scaffold3425 ScafM SNP 0011.scaffold00043 15148 1 T C scaffold3425 Both SNP 0011.scaffold00043 15177 1 A T scaffold3425 Both SNP 0011.scaffold00043 15340 1 A C scaffold3425 Both SNP 0011.scaffold00043 15349 1 T C scaffold3425 Both SNP 0011.scaffold00043 15408 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 15473 1 G C scaffold3425 Both INDEL 0011.scaffold00043 15491 2 .. AT scaffold3425 Both INDEL 0011.scaffold00043 15632 1 T . scaffold3425 Both SNP 0011.scaffold00043 15640 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 15669 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 15680 2 CG TA scaffold3425 ScafM SNP 0011.scaffold00043 15694 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 15770 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 15773 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 15780 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 15786 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 15802 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 15817 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 15819 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 15827 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 15852 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 15862 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 15886 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 15913 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 15928 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 15953 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 15965 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 15980 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 15990 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 16034 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 16062 1 C A scaffold3425 ScafM INDEL 0011.scaffold00043 16086 1 A . scaffold3425 ScafM SNP 0011.scaffold00043 16100 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 16134 3 ATC ... scaffold3425 ScafM SNP 0011.scaffold00043 16138 1 T G scaffold3425 ScafM INDEL 0011.scaffold00043 16140 1 T . scaffold3425 ScafM SNP 0011.scaffold00043 16143 2 TG AT scaffold3425 ScafM INDEL 0011.scaffold00043 16148 2 GA .C scaffold3425 ScafM SNP 0011.scaffold00043 16151 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 16153 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 16162 1 C . scaffold3425 ScafM SNP 0011.scaffold00043 16171 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 16198 1 G A scaffold3425 ScafM INDEL 0011.scaffold00043 16218 14 TTGTATGCATAAAA .............. scaffold3425 ScafM SNP 0011.scaffold00043 16246 1 C G scaffold3425 ScafM INDEL 0011.scaffold00043 16259 2 .. TA scaffold3425 ScafM SNP 0011.scaffold00043 16262 2 CC AT scaffold3425 ScafM SNP 0011.scaffold00043 16334 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 16354 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 16370 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 16383 1 T G scaffold3425 ScafM SNP 0011.scaffold00043 16408 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 16417 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 16434 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 16495 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 16505 1 A G scaffold3425 ScafM INDEL 0011.scaffold00043 16506 1 . A scaffold3425 ScafM SNP 0011.scaffold00043 16512 2 AA TT scaffold3425 ScafM SNP 0011.scaffold00043 16516 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 16519 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 16521 1 G A scaffold3425 ScafM INDEL 0011.scaffold00043 16522 2 .. AC scaffold3425 ScafM SNP 0011.scaffold00043 16524 2 TT AA scaffold3425 ScafM SNP 0011.scaffold00043 16528 1 T G scaffold3425 ScafM INDEL 0011.scaffold00043 16530 2 .. GC scaffold3425 ScafM SNP 0011.scaffold00043 16531 2 TT AC scaffold3425 ScafM SNP 0011.scaffold00043 16540 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 16553 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 16751 2 TT GA scaffold3425 ScafM INDEL 0011.scaffold00043 16757 2 CC .T scaffold3425 ScafM SNP 0011.scaffold00043 16771 1 T G scaffold3425 ScafM INDEL 0011.scaffold00043 16773 1 G . scaffold3425 ScafM SNP 0011.scaffold00043 16775 1 T G scaffold3425 ScafM SNP 0011.scaffold00043 16779 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 16785 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 16806 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 16831 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 16844 1 T G scaffold3425 ScafM INDEL 0011.scaffold00043 16849 4 .... GGAT scaffold3425 ScafM INDEL 0011.scaffold00043 16850 1 . A scaffold3425 ScafM INDEL 0011.scaffold00043 16852 2 .. GG scaffold3425 Both SNP 0011.scaffold00043 16921 1 C T scaffold3425 Both SNP 0011.scaffold00043 17050 1 G T scaffold3425 Both INDEL 0011.scaffold00043 17101 1 G . scaffold3425 Both SNP 0011.scaffold00043 17150 1 C G scaffold3425 Both SNP 0011.scaffold00043 17168 1 G A scaffold3425 Both SNP 0011.scaffold00043 17280 1 C G scaffold3425 ScafM INDEL 0011.scaffold00043 17311 4 .... ACTC scaffold3425 ScafM SNP 0011.scaffold00043 17322 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 17378 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 17384 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 17389 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 17405 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 17412 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 17445 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 17463 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 17479 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 17481 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 17483 1 A T scaffold3425 ScafM INDEL 0011.scaffold00043 17649 2 .. AA scaffold3425 ScafM SNP 0011.scaffold00043 17680 1 A G scaffold3425 ScafM INDEL 0011.scaffold00043 17687 31 ATTGGGGTATTATCATAATTGGAAGAAAGAG ............................... scaffold3425 ScafM SNP 0011.scaffold00043 17733 1 G A scaffold3425 Both SNP 0011.scaffold00043 17762 1 T C scaffold3425 Both SNP 0011.scaffold00043 17772 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 17881 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 17896 2 CC GG scaffold3425 ScafM SNP 0011.scaffold00043 17901 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 17917 1 G T scaffold3425 ScafM INDEL 0011.scaffold00043 17931 1 . A scaffold3425 ScafM SNP 0011.scaffold00043 17957 1 C A scaffold3425 ScafM SNP 0011.scaffold00043 17973 1 A T scaffold3425 ScafM INDEL 0011.scaffold00043 17995 4 .... CTCC scaffold3425 ScafM SNP 0011.scaffold00043 18008 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 18039 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 18065 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 18115 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 18120 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 18126 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 18158 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 18160 1 C G scaffold3425 ScafM SNP 0011.scaffold00043 18171 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 18176 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 18185 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 18200 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 19431 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 19498 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 19527 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 19679 1 A C scaffold3425 ScafM INDEL 0011.scaffold00043 19705 14 TATACGCAAGTGAA .............. scaffold3425 ScafM SNP 0011.scaffold00043 19730 1 G C scaffold3425 ScafM SNP 0011.scaffold00043 19773 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 19830 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 19832 2 AA TT scaffold3425 ScafM SNP 0011.scaffold00043 19855 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 19923 2 AA GG scaffold3425 ScafM SNP 0011.scaffold00043 19932 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 19939 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 19949 1 A G scaffold3425 ReadM SNP 0011.scaffold00043 20071 1 C T - ReadM SNP 0011.scaffold00043 20142 1 A G - ScafM SNP 0011.scaffold00043 20268 2 TC CT scaffold3425 Both SNP 0011.scaffold00043 20282 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 20678 1 C T scaffold3425 ReadM SNP 0011.scaffold00043 20710 1 A T - ReadM SNP 0011.scaffold00043 20724 1 C T - ReadM SNP 0011.scaffold00043 20743 1 C T - ScafM SNP 0011.scaffold00043 20841 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 20845 1 G T scaffold3425 ScafM INDEL 0011.scaffold00043 20893 29 ............................. AAAAAAAAAAAAAAAAAAAAAAAAAAAAA scaffold3425 Both SNP 0011.scaffold00043 20981 1 A G scaffold3425 ScafM INDEL 0011.scaffold00043 21058 3 ... AGT scaffold3425 ScafM SNP 0011.scaffold00043 21063 1 G A scaffold3425 ScafM INDEL 0011.scaffold00043 21094 8 ........ TGCGTATG scaffold3425 ScafM SNP 0011.scaffold00043 21209 1 T A scaffold3425 ScafM SNP 0011.scaffold00043 21282 1 T G scaffold3425 ReadM SNP 0011.scaffold00043 21796 1 C T - ReadM SNP 0011.scaffold00043 21874 1 A G - Both SNP 0011.scaffold00043 21887 1 A T scaffold3425 Both SNP 0011.scaffold00043 22118 1 C T scaffold3425 Both SNP 0011.scaffold00043 22213 1 A T scaffold3425 Both SNP 0011.scaffold00043 22581 1 G A scaffold3425 Both SNP 0011.scaffold00043 22715 1 A G scaffold3425 Both SNP 0011.scaffold00043 22747 1 A C scaffold3425 Both SNP 0011.scaffold00043 23355 1 A G scaffold3425 Both SNP 0011.scaffold00043 23620 1 T G scaffold3425 Both SNP 0011.scaffold00043 24043 1 A G scaffold3425 ReadM SNP 0011.scaffold00043 24248 1 T A - ReadM SNP 0011.scaffold00043 24276 1 C T - ReadM SNP 0011.scaffold00043 24599 1 C T - ReadM SNP 0011.scaffold00043 24639 1 C T - ReadM SNP 0011.scaffold00043 24646 1 C T - ReadM SNP 0011.scaffold00043 24689 1 G A - Both INDEL 0011.scaffold00043 24877 1 T . scaffold3425 ReadM SNP 0011.scaffold00043 24973 1 A G - ReadM SNP 0011.scaffold00043 25010 1 C T - ReadM SNP 0011.scaffold00043 25045 1 G A - ReadM SNP 0011.scaffold00043 25182 1 G C - Both SNP 0011.scaffold00043 25343 1 C T scaffold3425 Both SNP 0011.scaffold00043 25372 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 25420 1 A T scaffold3425 ScafM SNP 0011.scaffold00043 25426 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 25831 2 .. TT scaffold3425 ScafM INDEL 0011.scaffold00043 25851 6 ...... CGCTTT scaffold3425 Both SNP 0011.scaffold00043 26001 1 T A scaffold3425 Both SNP 0011.scaffold00043 26413 1 C T scaffold3425 Both SNP 0011.scaffold00043 26615 1 C T scaffold3425 Both SNP 0011.scaffold00043 26675 1 G A scaffold3425 Both SNP 0011.scaffold00043 26958 1 T C scaffold3425 Both SNP 0011.scaffold00043 27326 1 C T scaffold3425 Both SNP 0011.scaffold00043 27466 1 A G scaffold3425 Both INDEL 0011.scaffold00043 27542 1 A . scaffold3425 Both SNP 0011.scaffold00043 27557 1 T C scaffold3425 Both SNP 0011.scaffold00043 27926 1 G A scaffold3425 Both SNP 0011.scaffold00043 28034 1 G T scaffold3425 Both SNP 0011.scaffold00043 28475 1 C T scaffold3425 Both SNP 0011.scaffold00043 28602 1 G T scaffold3425 Both SNP 0011.scaffold00043 28847 1 C T scaffold3425 ReadM SNP 0011.scaffold00043 29198 1 T C - ReadM SNP 0011.scaffold00043 29263 1 T C - Both SNP 0011.scaffold00043 29476 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 29606 2 AG GA scaffold3425 Both INDEL 0011.scaffold00043 29687 1 A . scaffold3425 Both SNP 0011.scaffold00043 29813 1 G A scaffold3425 Both INDEL 0011.scaffold00043 29907 1 A . scaffold3425 Both INDEL 0011.scaffold00043 29949 2 AT .. scaffold3425 ReadM SNP 0011.scaffold00043 30033 1 C T - ReadM SNP 0011.scaffold00043 30049 1 T G - ReadM SNP 0011.scaffold00043 30164 1 C G - ScafM SNP 0011.scaffold00043 30234 1 G A scaffold5984 ScafM SNP 0011.scaffold00043 30243 2 TC CT scaffold5984 ScafM INDEL 0011.scaffold00043 30252 3 CAA .TG scaffold5984 Both SNP 0011.scaffold00043 30377 1 G T scaffold3425 Both SNP 0011.scaffold00043 30441 1 C T scaffold3425 Both SNP 0011.scaffold00043 30528 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 30575 1 C T scaffold3425 ScafM SNP 0011.scaffold00043 30593 1 C T scaffold3425 ScafM INDEL 0011.scaffold00043 30754 6 ...... AATATT scaffold3425 ReadM SNP 0011.scaffold00043 30832 1 G C - ReadM SNP 0011.scaffold00043 30852 1 A G - ReadM SNP 0011.scaffold00043 31144 1 T C - ReadM SNP 0011.scaffold00043 31235 1 A T - ReadM SNP 0011.scaffold00043 31266 1 G C - ReadM SNP 0011.scaffold00043 31370 1 T C - ReadM SNP 0011.scaffold00043 31381 1 G A - ReadM SNP 0011.scaffold00043 31414 1 T G - ReadM SNP 0011.scaffold00043 31558 1 C T - ReadM SNP 0011.scaffold00043 31678 1 C T - ReadM INDEL 0011.scaffold00043 31693 1 . A - ReadM SNP 0011.scaffold00043 31768 1 A C - ReadM INDEL 0011.scaffold00043 31899 1 A . - ReadM SNP 0011.scaffold00043 32034 1 G A - ReadM SNP 0011.scaffold00043 32235 1 C T - ReadM INDEL 0011.scaffold00043 32343 1 T . - ReadM INDEL 0011.scaffold00043 32398 1 . A - ReadM SNP 0011.scaffold00043 32413 1 C T - ReadM SNP 0011.scaffold00043 32562 1 T G - ReadM SNP 0011.scaffold00043 33034 1 C T - Both SNP 0011.scaffold00043 33114 1 A G scaffold3425 Both SNP 0011.scaffold00043 33141 1 C T scaffold3425 ReadM SNP 0011.scaffold00043 33300 1 G A - Both SNP 0011.scaffold00043 33394 1 A G scaffold3425 Both SNP 0011.scaffold00043 33406 1 T A scaffold3425 ReadM INDEL 0011.scaffold00043 33578 3 CAT ... - Both INDEL 0011.scaffold00043 33747 1 . G scaffold3425 Both SNP 0011.scaffold00043 33822 1 T A scaffold3425 Both SNP 0011.scaffold00043 33983 1 C A scaffold3425 ReadM SNP 0011.scaffold00043 34132 1 C A - ReadM INDEL 0011.scaffold00043 34162 1 T . - ReadM SNP 0011.scaffold00043 34236 1 C A - ScafM INDEL 0011.scaffold00043 34295 4 ACTA .... scaffold3425 ScafM SNP 0011.scaffold00043 34303 1 A C scaffold3425 ScafM SNP 0011.scaffold00043 34315 2 TT CC scaffold3425 Both SNP 0011.scaffold00043 34428 1 G A scaffold3425 ReadM SNP 0011.scaffold00043 34577 1 G C - ReadM INDEL 0011.scaffold00043 34672 3 TGG ... - ReadM SNP 0011.scaffold00043 34742 1 A G - ReadM INDEL 0011.scaffold00043 34916 3 ATA ... - ScafM SNP 0011.scaffold00043 36770 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 36776 1 C T scaffold3425 ReadM SNP 0011.scaffold00043 37306 1 A T - ReadM SNP 0011.scaffold00043 37328 1 A T - ReadM SNP 0011.scaffold00043 37559 1 A C - ReadM SNP 0011.scaffold00043 37598 1 G A - ReadM SNP 0011.scaffold00043 37667 1 G A - ReadM SNP 0011.scaffold00043 37770 1 A T - ReadM SNP 0011.scaffold00043 37861 1 T A - ReadM SNP 0011.scaffold00043 38203 1 A G - ReadM SNP 0011.scaffold00043 38353 1 C T - ReadM SNP 0011.scaffold00043 38367 1 G T - ReadM SNP 0011.scaffold00043 38444 1 C T - ReadM SNP 0011.scaffold00043 38652 1 G A - ReadM SNP 0011.scaffold00043 38713 2 GT AC - ReadM SNP 0011.scaffold00043 38808 1 T C - ReadM SNP 0011.scaffold00043 38811 1 C T - ReadM SNP 0011.scaffold00043 39002 1 C G - ReadM SNP 0011.scaffold00043 39122 1 T C - ReadM SNP 0011.scaffold00043 39280 1 G C - ReadM SNP 0011.scaffold00043 39343 1 A T - ReadM SNP 0011.scaffold00043 39425 1 T A - ReadM SNP 0011.scaffold00043 39581 1 C A - ReadM SNP 0011.scaffold00043 39633 1 G A - ReadM SNP 0011.scaffold00043 39693 1 C T - ReadM SNP 0011.scaffold00043 39739 1 C G - ScafM SNP 0011.scaffold00043 40126 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 40232 1 C T scaffold3425 Both SNP 0011.scaffold00043 40352 1 T G scaffold3425 Both SNP 0011.scaffold00043 40409 1 T C scaffold3425 ScafM SNP 0011.scaffold00043 40482 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 40557 1 A G scaffold3425 ReadM SNP 0011.scaffold00043 40624 1 T C - ReadM SNP 0011.scaffold00043 40635 1 A C - ReadM SNP 0011.scaffold00043 40680 1 G A - ReadM SNP 0011.scaffold00043 40747 1 T C - ReadM SNP 0011.scaffold00043 40780 1 C T - ReadM SNP 0011.scaffold00043 40801 1 A G - ReadM SNP 0011.scaffold00043 40864 1 C T - ReadM SNP 0011.scaffold00043 40880 1 T C - ReadM SNP 0011.scaffold00043 41037 1 G A - ReadM SNP 0011.scaffold00043 41087 1 T A - ReadM SNP 0011.scaffold00043 41220 1 T C - Both SNP 0011.scaffold00043 41309 1 C T scaffold3425 Both SNP 0011.scaffold00043 41336 1 A G scaffold3425 Both INDEL 0011.scaffold00043 41414 1 . A scaffold3425 ScafM SNP 0011.scaffold00043 41527 2 CT TC scaffold3425 Both SNP 0011.scaffold00043 41543 1 T C scaffold3425 Both SNP 0011.scaffold00043 41628 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 41844 1 T C scaffold3425 ScafM INDEL 0011.scaffold00043 41865 1 . G scaffold3425 ScafM SNP 0011.scaffold00043 41867 3 TTT AAG scaffold3425 ScafM SNP 0011.scaffold00043 41878 1 G T scaffold3425 ScafM SNP 0011.scaffold00043 41932 1 T A scaffold3425 Both SNP 0011.scaffold00043 41979 1 G A scaffold3425 ScafM SNP 0011.scaffold00043 42134 1 A G scaffold3425 ScafM SNP 0011.scaffold00043 42189 1 T C scaffold3425 ReadM SNP 0011.scaffold00043 42413 1 C A - ReadM SNP 0011.scaffold00043 42461 1 T C - ReadM SNP 0011.scaffold00043 42494 1 C A - ReadM SNP 0011.scaffold00043 42667 1 C T - ReadM SNP 0011.scaffold00043 42706 1 C T - ReadM SNP 0011.scaffold00043 42835 1 C T - ReadM SNP 0011.scaffold00043 42928 1 T A - ReadM SNP 0011.scaffold00043 42966 1 T A - ReadM SNP 0011.scaffold00043 43044 1 G A - ReadM SNP 0011.scaffold00043 43069 1 A C - Both INDEL 0011.scaffold00043 43185 1 . T scaffold22690 ReadM SNP 0011.scaffold00043 43275 1 A G - ReadM SNP 0011.scaffold00043 43536 1 T C - ReadM SNP 0011.scaffold00043 43623 1 A G - ReadM INDEL 0011.scaffold00043 43662 1 . T - ScafM SNP 0011.scaffold00043 43902 1 G A scaffold22690 ScafM INDEL 0011.scaffold00043 43904 1 . A scaffold22690 ScafM SNP 0011.scaffold00043 43973 1 G C scaffold22690 ScafM SNP 0011.scaffold00043 44034 1 T A scaffold22690 ScafM SNP 0011.scaffold00043 44136 1 C T scaffold22690 ScafM SNP 0011.scaffold00043 44167 1 C T scaffold22690 ReadM SNP 0011.scaffold00043 44379 1 C T - ReadM SNP 0011.scaffold00043 44488 1 T G - ReadM SNP 0011.scaffold00043 44516 1 G A - ScafM INDEL 0011.scaffold00043 44680 1 . T scaffold22690 Both SNP 0011.scaffold00043 44801 1 C T scaffold22690 Both SNP 0011.scaffold00043 45036 1 A C scaffold22690 Both SNP 0011.scaffold00043 45059 1 G C scaffold22690 Both SNP 0011.scaffold00043 45200 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 45262 2 TT CC scaffold22690 Both SNP 0011.scaffold00043 45493 1 A T scaffold22690 ReadM SNP 0011.scaffold00043 45521 1 G A - Both SNP 0011.scaffold00043 45719 1 G A scaffold22690 Both SNP 0011.scaffold00043 45932 1 G A scaffold22690 ScafM INDEL 0011.scaffold00043 46205 4 .... ATTA scaffold22690 ScafM INDEL 0011.scaffold00043 46251 1 T . scaffold22690 ReadM INDEL 0011.scaffold00043 46355 1 T . - ReadM SNP 0011.scaffold00043 46374 1 A C - ReadM SNP 0011.scaffold00043 46431 1 C A - ReadM SNP 0011.scaffold00043 46664 1 C A - Both SNP 0011.scaffold00043 46794 1 G C scaffold22690 Both SNP 0011.scaffold00043 46834 1 A G scaffold22690 Both SNP 0011.scaffold00043 47032 1 G A scaffold22690 Both SNP 0011.scaffold00043 47043 1 T A scaffold22690 Both SNP 0011.scaffold00043 47114 1 A G scaffold22690 Both SNP 0011.scaffold00043 47276 1 C T scaffold22690 Both SNP 0011.scaffold00043 47281 1 C T scaffold22690 ScafM INDEL 0011.scaffold00043 47286 4 GAGT .... scaffold22690 Both SNP 0011.scaffold00043 47355 1 A G scaffold22690 Both INDEL 0011.scaffold00043 47356 1 . G scaffold22690 Both SNP 0011.scaffold00043 47476 1 C T scaffold22690 ScafM INDEL 0011.scaffold00043 47543 2 CT .. scaffold22690 ScafM INDEL 0011.scaffold00043 47578 3 TGA ... scaffold22690 Both SNP 0011.scaffold00043 47607 1 T G scaffold22690 Both SNP 0011.scaffold00043 47650 1 T C scaffold22690 Both SNP 0011.scaffold00043 47665 1 C T scaffold22690 Both SNP 0011.scaffold00043 47734 1 T C scaffold22690 Both SNP 0011.scaffold00043 47765 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 48166 1 T C scaffold22690 ScafM INDEL 0011.scaffold00043 48172 1 . T scaffold22690 ScafM INDEL 0011.scaffold00043 48203 14 GAAGAAAAACATAA .............. scaffold22690 ScafM INDEL 0011.scaffold00043 48220 6 CATAGT ...... scaffold22690 ScafM INDEL 0011.scaffold00043 48229 13 TATACACTATTAA ............. scaffold22690 ScafM SNP 0011.scaffold00043 48254 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 48281 2 TA AT scaffold22690 ScafM SNP 0011.scaffold00043 48284 1 G C scaffold22690 ScafM SNP 0011.scaffold00043 48310 1 A G scaffold22690 ScafM INDEL 0011.scaffold00043 48316 1 . T scaffold22690 ScafM SNP 0011.scaffold00043 48343 2 TT CC scaffold22690 ScafM SNP 0011.scaffold00043 48348 1 C T scaffold22690 ScafM SNP 0011.scaffold00043 48353 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 48355 1 T C scaffold22690 ScafM INDEL 0011.scaffold00043 48376 2 .. AA scaffold22690 ScafM INDEL 0011.scaffold00043 48378 1 . A scaffold22690 ScafM INDEL 0011.scaffold00043 48380 3 ... TTT scaffold22690 ScafM INDEL 0011.scaffold00043 48460 1 T . scaffold22690 ScafM INDEL 0011.scaffold00043 48492 9 CTCTTTTCT ......... scaffold22690 ScafM INDEL 0011.scaffold00043 48800 23 CATTCACTCTCTTGAATCTTACC ....................... scaffold22690 ScafM INDEL 0011.scaffold00043 48824 6 CCTCCT ...... scaffold22690 ScafM SNP 0011.scaffold00043 48838 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 48918 1 G A scaffold22690 ScafM SNP 0011.scaffold00043 48941 2 AA CG scaffold22690 ScafM SNP 0011.scaffold00043 48972 1 A C scaffold22690 ScafM SNP 0011.scaffold00043 49149 1 C T scaffold22690 ScafM INDEL 0011.scaffold00043 49218 2 .. TT scaffold22690 ScafM SNP 0011.scaffold00043 49235 1 G T scaffold22690 ScafM SNP 0011.scaffold00043 49247 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 49257 1 A T scaffold22690 ScafM SNP 0011.scaffold00043 49293 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 49341 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 49354 1 C T scaffold22690 ScafM INDEL 0011.scaffold00043 49359 3 ... AGT scaffold22690 ScafM SNP 0011.scaffold00043 49367 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 49379 1 G T scaffold22690 ScafM SNP 0011.scaffold00043 49983 1 A G scaffold22690 ScafM INDEL 0011.scaffold00043 50021 4 TATT .... scaffold22690 ScafM INDEL 0011.scaffold00043 50027 1 C . scaffold22690 ScafM SNP 0011.scaffold00043 50044 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 50051 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 50056 1 A C scaffold22690 ScafM INDEL 0011.scaffold00043 50078 3 ... ATT scaffold22690 ScafM SNP 0011.scaffold00043 50091 1 G T scaffold22690 ScafM SNP 0011.scaffold00043 50116 1 G T scaffold22690 ScafM SNP 0011.scaffold00043 50131 1 C A scaffold22690 ScafM INDEL 0011.scaffold00043 50140 7 TTCGTCT ....... scaffold22690 ScafM INDEL 0011.scaffold00043 50148 1 T . scaffold22690 ScafM SNP 0011.scaffold00043 50166 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 50168 1 G A scaffold22690 ScafM SNP 0011.scaffold00043 50170 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 50175 1 T A scaffold22690 ScafM INDEL 0011.scaffold00043 50314 4 ATAT .... scaffold22690 ScafM SNP 0011.scaffold00043 50371 1 G A scaffold22690 ScafM SNP 0011.scaffold00043 50417 1 G C scaffold22690 ScafM SNP 0011.scaffold00043 50420 1 A G scaffold22690 Both SNP 0011.scaffold00043 50463 1 A G scaffold22690 Both SNP 0011.scaffold00043 50478 1 T A scaffold22690 ScafM SNP 0011.scaffold00043 50557 1 A G scaffold22690 Both SNP 0011.scaffold00043 50582 1 T C scaffold22690 Both SNP 0011.scaffold00043 50604 1 A G scaffold22690 Both SNP 0011.scaffold00043 50651 1 C T scaffold22690 ScafM SNP 0011.scaffold00043 50817 1 G C scaffold22690 ScafM SNP 0011.scaffold00043 51280 1 A G scaffold22690 ScafM SNP 0011.scaffold00043 51442 1 T C scaffold22690 ReadM SNP 0011.scaffold00043 51463 1 T C - ReadM SNP 0011.scaffold00043 51604 1 C G - ReadM SNP 0011.scaffold00043 51685 1 C T - ReadM SNP 0011.scaffold00043 51742 1 A G - ReadM SNP 0011.scaffold00043 51852 1 A G - ReadM SNP 0011.scaffold00043 52031 1 G A - ReadM SNP 0011.scaffold00043 52171 1 A G - ReadM INDEL 0011.scaffold00043 52342 1 C . - ReadM SNP 0011.scaffold00043 52473 1 A C - ReadM INDEL 0011.scaffold00043 52748 1 . T - ReadM SNP 0011.scaffold00043 52771 1 T C - ReadM INDEL 0011.scaffold00043 53079 1 . T - ReadM SNP 0011.scaffold00043 53340 1 C T - ReadM SNP 0011.scaffold00043 53343 1 A G - ReadM SNP 0011.scaffold00043 53356 1 T C - ReadM SNP 0011.scaffold00043 53450 1 C T - ReadM SNP 0011.scaffold00043 53714 1 G T - ReadM SNP 0011.scaffold00043 53753 1 C T - ReadM SNP 0011.scaffold00043 53891 1 T C - ReadM SNP 0011.scaffold00043 53975 1 C A - ReadM SNP 0011.scaffold00043 54273 1 A C - ReadM SNP 0011.scaffold00043 54440 1 G A - ReadM SNP 0011.scaffold00043 54470 1 T G - ReadM SNP 0011.scaffold00043 54515 1 G A - ReadM SNP 0011.scaffold00043 54894 1 C T - ReadM INDEL 0011.scaffold00043 54956 2 TT .. - ReadM SNP 0011.scaffold00043 54991 1 C G - ReadM SNP 0011.scaffold00043 55040 1 T A - ReadM SNP 0011.scaffold00043 55048 1 C T - ReadM SNP 0011.scaffold00043 55093 1 A T - ReadM SNP 0011.scaffold00043 55239 1 A G - ReadM SNP 0011.scaffold00043 55319 1 C T - ReadM SNP 0011.scaffold00043 55350 1 C T - ReadM SNP 0011.scaffold00043 55371 1 T C - ReadM SNP 0011.scaffold00043 55432 1 A G - ReadM SNP 0011.scaffold00043 55442 1 T G - ReadM SNP 0011.scaffold00043 55512 2 CA GT - ReadM SNP 0011.scaffold00043 55651 1 G A - ReadM SNP 0011.scaffold00043 55685 1 A G - ReadM SNP 0011.scaffold00043 55697 1 G T - ReadM SNP 0011.scaffold00043 55851 1 A T - ReadM SNP 0011.scaffold00043 55858 1 T C - ReadM SNP 0011.scaffold00043 55864 1 T G - ReadM SNP 0011.scaffold00043 55931 1 C T - ReadM SNP 0011.scaffold00043 55959 1 T C - ReadM INDEL 0011.scaffold00043 55964 1 . C - ReadM SNP 0011.scaffold00043 56026 1 T C - ReadM SNP 0011.scaffold00043 56309 1 T C - ReadM SNP 0011.scaffold00043 56515 1 T C - ReadM SNP 0011.scaffold00043 56555 1 C A - ReadM SNP 0011.scaffold00043 56581 1 T C - ReadM SNP 0011.scaffold00043 56606 1 G A - ReadM SNP 0011.scaffold00043 56708 1 T C - ReadM SNP 0011.scaffold00043 56771 1 T C - ReadM SNP 0011.scaffold00043 56818 1 A G - ReadM SNP 0011.scaffold00043 56949 1 A G - ReadM SNP 0011.scaffold00043 56956 1 C G - ReadM SNP 0011.scaffold00043 57018 1 G A - ReadM SNP 0011.scaffold00043 57111 1 G T - ReadM SNP 0011.scaffold00043 57198 1 A G - ReadM SNP 0011.scaffold00043 57248 1 T C - ReadM SNP 0011.scaffold00043 57332 1 C G - Both SNP 0011.scaffold00043 57412 1 T C scaffold22690 Both INDEL 0011.scaffold00043 57735 1 T . scaffold22690 Both SNP 0011.scaffold00043 57865 1 A G scaffold22690 Both SNP 0011.scaffold00043 57876 1 A G scaffold22690 ReadM INDEL 0011.scaffold00043 58254 1 T . - ReadM SNP 0011.scaffold00043 58302 1 T C - ReadM SNP 0011.scaffold00043 58416 1 A G - ReadM SNP 0011.scaffold00043 58427 1 C A - ReadM SNP 0011.scaffold00043 58529 1 C T - ReadM SNP 0011.scaffold00043 58609 1 A G - ReadM SNP 0011.scaffold00043 59302 1 T C - ReadM SNP 0011.scaffold00043 59838 1 A C - ScafM SNP 0011.scaffold00043 59957 3 GGA ATG scaffold22690 Both SNP 0011.scaffold00043 59980 1 T C scaffold22690 Both INDEL 0011.scaffold00043 59989 1 A . scaffold22690 Both SNP 0011.scaffold00043 60071 1 G A scaffold22690 ScafM INDEL 0011.scaffold00043 60174 29 TTAGGAAACGTTTATTCGAATAACATAAT ............................. scaffold22690 ReadM SNP 0011.scaffold00043 60261 1 G A - ScafM INDEL 0011.scaffold00043 60407 7 AGGGATC ....... scaffold22690 ScafM SNP 0011.scaffold00043 60500 2 TG GA scaffold22690 Both SNP 0011.scaffold00043 60637 1 G A scaffold22690 ScafM INDEL 0011.scaffold00043 60750 4 .... AAAT scaffold22690 ScafM SNP 0011.scaffold00043 60825 1 T C scaffold22690 ScafM SNP 0011.scaffold00043 61365 1 T A scaffold18186 ReadM SNP 0011.scaffold00043 61402 1 C T - ReadM SNP 0011.scaffold00043 61540 1 T G - ReadM SNP 0011.scaffold00043 61890 1 C T - ReadM SNP 0011.scaffold00043 61966 1 T C - ReadM SNP 0011.scaffold00043 61973 1 C T - ReadM SNP 0011.scaffold00043 62122 1 A C - ReadM INDEL 0011.scaffold00043 62557 2 TA .. - ReadM SNP 0011.scaffold00043 63641 1 G A - ReadM SNP 0011.scaffold00043 67806 1 G T - ReadM SNP 0011.scaffold00043 68368 1 T G - ReadM SNP 0011.scaffold00043 68373 1 A C - ReadM SNP 0011.scaffold00043 68473 1 G A - ReadM SNP 0011.scaffold00043 68589 1 A T - Both SNP 0011.scaffold00043 68978 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 69531 2 TG GA scaffold9196 Both SNP 0011.scaffold00043 69828 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 70143 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 70150 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 70599 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 70691 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 70702 1 G C scaffold9196 ReadM SNP 0011.scaffold00043 70958 1 C T - ReadM SNP 0011.scaffold00043 71014 1 C T - Both SNP 0011.scaffold00043 71141 1 A T scaffold9196 Both SNP 0011.scaffold00043 71201 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 71420 1 C T scaffold9196 ReadM SNP 0011.scaffold00043 71432 1 A C - ReadM INDEL 0011.scaffold00043 71462 1 T . - ReadM SNP 0011.scaffold00043 71531 1 T C - ReadM SNP 0011.scaffold00043 71629 1 T A - Both SNP 0011.scaffold00043 71750 1 A G scaffold9196 ReadM SNP 0011.scaffold00043 71794 1 T A - ReadM SNP 0011.scaffold00043 71888 1 A G - ReadM SNP 0011.scaffold00043 71951 1 T C - ReadM SNP 0011.scaffold00043 72028 1 G A - ReadM SNP 0011.scaffold00043 72070 1 G A - ReadM SNP 0011.scaffold00043 72074 1 T A - ReadM SNP 0011.scaffold00043 72150 1 C A - ReadM SNP 0011.scaffold00043 72197 1 C T - ReadM SNP 0011.scaffold00043 72373 1 T C - ReadM SNP 0011.scaffold00043 72383 1 T C - ReadM SNP 0011.scaffold00043 72451 1 T A - ReadM SNP 0011.scaffold00043 72806 1 A T - ReadM SNP 0011.scaffold00043 73329 1 A G - ReadM SNP 0011.scaffold00043 73428 1 C A - ReadM INDEL 0011.scaffold00043 73479 1 T . - ReadM SNP 0011.scaffold00043 73561 1 C T - ReadM SNP 0011.scaffold00043 73575 1 G A - ReadM SNP 0011.scaffold00043 73741 1 A G - ReadM SNP 0011.scaffold00043 73858 1 A G - ReadM SNP 0011.scaffold00043 73917 1 G A - ReadM SNP 0011.scaffold00043 73982 1 A G - ReadM SNP 0011.scaffold00043 74280 1 C A - ReadM SNP 0011.scaffold00043 74410 1 C G - ReadM SNP 0011.scaffold00043 74464 1 G A - ReadM SNP 0011.scaffold00043 74930 1 T G - ReadM SNP 0011.scaffold00043 75009 1 G A - ReadM SNP 0011.scaffold00043 75046 1 G A - ReadM SNP 0011.scaffold00043 75056 1 G A - ReadM SNP 0011.scaffold00043 75198 1 G A - ReadM SNP 0011.scaffold00043 75248 1 T G - ReadM SNP 0011.scaffold00043 75333 1 A G - ReadM SNP 0011.scaffold00043 75420 1 A C - ReadM SNP 0011.scaffold00043 75531 1 G A - ReadM SNP 0011.scaffold00043 75582 1 A G - ReadM SNP 0011.scaffold00043 75591 1 T C - ReadM SNP 0011.scaffold00043 75950 1 C T - ReadM SNP 0011.scaffold00043 76029 1 C T - ReadM SNP 0011.scaffold00043 76042 1 G T - ReadM SNP 0011.scaffold00043 76153 1 A C - Both SNP 0011.scaffold00043 76527 1 A G scaffold9196 ReadM SNP 0011.scaffold00043 76727 1 C T - ReadM SNP 0011.scaffold00043 76829 1 A G - ReadM SNP 0011.scaffold00043 76983 1 A G - ReadM SNP 0011.scaffold00043 77423 1 T C - ReadM SNP 0011.scaffold00043 77884 1 T C - ReadM SNP 0011.scaffold00043 77967 1 G T - ReadM SNP 0011.scaffold00043 77981 1 T A - ScafM SNP 0011.scaffold00043 78891 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 78974 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 79004 1 A G scaffold9196 ReadM SNP 0011.scaffold00043 79322 1 A G - ScafM SNP 0011.scaffold00043 79591 1 G T scaffold9196 ScafM INDEL 0011.scaffold00043 79599 1 T . scaffold9196 ScafM SNP 0011.scaffold00043 80168 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 80172 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 80196 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 80378 1 A G scaffold9196 ReadM SNP 0011.scaffold00043 81657 1 A T - ReadM INDEL 0011.scaffold00043 81673 1 A . - Both SNP 0011.scaffold00043 81881 1 T A scaffold9196 Both SNP 0011.scaffold00043 81896 1 C A scaffold9196 Both SNP 0011.scaffold00043 81945 1 G T scaffold9196 Both SNP 0011.scaffold00043 81957 1 C T scaffold9196 Both SNP 0011.scaffold00043 82025 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 82048 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 82053 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 82080 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 82082 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 82095 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 82120 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 82169 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 82184 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 82190 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 82194 1 T A scaffold9196 Both SNP 0011.scaffold00043 82251 1 C T scaffold9196 Both SNP 0011.scaffold00043 82254 1 A T scaffold9196 Both SNP 0011.scaffold00043 82374 1 C T scaffold9196 Both SNP 0011.scaffold00043 82392 1 G T scaffold9196 Both SNP 0011.scaffold00043 82449 1 G T scaffold9196 Both SNP 0011.scaffold00043 82455 1 A G scaffold9196 Both SNP 0011.scaffold00043 82497 1 A T scaffold9196 Both SNP 0011.scaffold00043 82563 1 T C scaffold9196 Both SNP 0011.scaffold00043 82593 1 G A scaffold9196 Both SNP 0011.scaffold00043 82633 1 C G scaffold9196 ScafM INDEL 0011.scaffold00043 82661 4 .... GCGC scaffold9196 ScafM INDEL 0011.scaffold00043 82666 3 ... GCG scaffold9196 ScafM SNP 0011.scaffold00043 82681 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 82693 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 82705 1 C G scaffold9196 ScafM INDEL 0011.scaffold00043 82708 4 .... ACTG scaffold9196 ScafM SNP 0011.scaffold00043 82724 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 82740 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 82744 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 82775 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 82824 1 T C scaffold9196 ReadM SNP 0011.scaffold00043 83005 1 G T - ReadM SNP 0011.scaffold00043 83028 1 T C - ReadM INDEL 0011.scaffold00043 83087 1 A . - ReadM SNP 0011.scaffold00043 83132 1 A T - ReadM SNP 0011.scaffold00043 83151 1 C A - ReadM INDEL 0011.scaffold00043 83265 1 . G - ReadM SNP 0011.scaffold00043 83396 1 T A - ReadM SNP 0011.scaffold00043 83411 1 G T - ReadM SNP 0011.scaffold00043 83447 1 C T - ReadM SNP 0011.scaffold00043 83477 1 A T - ReadM SNP 0011.scaffold00043 83498 1 T C - ReadM SNP 0011.scaffold00043 83512 1 T C - ReadM SNP 0011.scaffold00043 83579 1 A C - ReadM SNP 0011.scaffold00043 83596 1 A G - ReadM SNP 0011.scaffold00043 83651 1 A T - ReadM SNP 0011.scaffold00043 83928 1 A C - ReadM SNP 0011.scaffold00043 83965 1 T C - ReadM SNP 0011.scaffold00043 83967 1 G A - ReadM SNP 0011.scaffold00043 84777 1 T C - ReadM SNP 0011.scaffold00043 84833 1 T C - ReadM SNP 0011.scaffold00043 84854 1 T A - ReadM INDEL 0011.scaffold00043 84927 2 .. AA - ReadM SNP 0011.scaffold00043 84936 1 C T - ReadM SNP 0011.scaffold00043 85007 1 A G - ReadM SNP 0011.scaffold00043 85095 1 T C - ReadM SNP 0011.scaffold00043 85213 1 C G - ReadM SNP 0011.scaffold00043 85249 1 A G - ReadM SNP 0011.scaffold00043 85276 1 A G - ReadM SNP 0011.scaffold00043 85330 1 T A - ReadM SNP 0011.scaffold00043 85384 1 A G - ReadM SNP 0011.scaffold00043 85426 1 A T - ReadM SNP 0011.scaffold00043 85705 1 G A - ReadM SNP 0011.scaffold00043 86036 1 T C - ReadM SNP 0011.scaffold00043 86053 1 A G - ScafM SNP 0011.scaffold00043 86405 1 T A scaffold9196 Both SNP 0011.scaffold00043 86407 1 T C scaffold9196 Both SNP 0011.scaffold00043 86426 1 C T scaffold9196 ReadM SNP 0011.scaffold00043 86456 1 G A - ReadM SNP 0011.scaffold00043 86499 1 A C - ReadM SNP 0011.scaffold00043 86547 1 G A - ReadM SNP 0011.scaffold00043 86553 1 T C - ScafM SNP 0011.scaffold00043 86643 1 A G scaffold9196 ScafM INDEL 0011.scaffold00043 86709 4 .... TCGA scaffold9196 ScafM SNP 0011.scaffold00043 86764 1 T C scaffold9196 Both SNP 0011.scaffold00043 86835 1 A G scaffold9196 Both SNP 0011.scaffold00043 86875 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 86892 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 86904 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 86917 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 86923 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 86946 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 86995 2 GT TG scaffold9196 ScafM SNP 0011.scaffold00043 87591 1 G A scaffold9196 ScafM INDEL 0011.scaffold00043 87606 2 .G AA scaffold9196 ScafM SNP 0011.scaffold00043 87625 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 87635 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 87671 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 87680 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 87687 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 87740 2 TG AA scaffold9196 ScafM SNP 0011.scaffold00043 87768 2 AT CC scaffold9196 ScafM SNP 0011.scaffold00043 87800 2 CC TT scaffold9196 ScafM SNP 0011.scaffold00043 87831 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 88523 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 88572 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 88579 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 88601 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 88646 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 88687 1 G T scaffold9196 ScafM INDEL 0011.scaffold00043 88704 1 . A scaffold9196 ScafM SNP 0011.scaffold00043 88727 1 C G scaffold9196 ScafM SNP 0011.scaffold00043 88743 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 88748 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 88788 1 C T scaffold9196 ReadM SNP 0011.scaffold00043 89092 1 T C - ScafM SNP 0011.scaffold00043 91302 1 T C scaffold7611 ScafM SNP 0011.scaffold00043 91346 1 C T scaffold7611 ScafM SNP 0011.scaffold00043 91366 1 A C scaffold7611 ScafM SNP 0011.scaffold00043 93157 1 C G scaffold9196 ScafM SNP 0011.scaffold00043 93196 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 93218 1 T C scaffold9196 ScafM INDEL 0011.scaffold00043 93245 4 ATAT .... scaffold9196 ScafM SNP 0011.scaffold00043 93250 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 93273 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 93287 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 93349 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 93363 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 93374 3 ATT GAA scaffold9196 ScafM SNP 0011.scaffold00043 93504 1 C T scaffold9196 Both SNP 0011.scaffold00043 93535 1 C T scaffold9196 Both SNP 0011.scaffold00043 93573 1 C G scaffold9196 ScafM SNP 0011.scaffold00043 93594 1 C T scaffold9196 ReadM SNP 0011.scaffold00043 93642 1 A G - ReadM SNP 0011.scaffold00043 93670 1 G C - ScafM SNP 0011.scaffold00043 93808 1 C T scaffold9196 ScafM INDEL 0011.scaffold00043 93809 4 .... GAGC scaffold9196 ScafM SNP 0011.scaffold00043 93832 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 93838 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 93859 1 A G scaffold9196 ScafM INDEL 0011.scaffold00043 93887 6 ...... ACCCGG scaffold9196 ScafM SNP 0011.scaffold00043 93890 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 93904 2 AA CG scaffold9196 ScafM SNP 0011.scaffold00043 93923 2 AA TT scaffold9196 Both INDEL 0011.scaffold00043 93931 2 .. TT scaffold9196 Both SNP 0011.scaffold00043 93976 1 G A scaffold9196 ScafM INDEL 0011.scaffold00043 94037 2 .. AA scaffold9196 ScafM SNP 0011.scaffold00043 94041 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 94076 1 T C scaffold9196 Both INDEL 0011.scaffold00043 94108 1 . G scaffold9196 Both SNP 0011.scaffold00043 94121 1 G A scaffold9196 Both SNP 0011.scaffold00043 94157 1 G A scaffold9196 Both SNP 0011.scaffold00043 94194 1 A G scaffold9196 Both SNP 0011.scaffold00043 94319 1 C T scaffold9196 Both SNP 0011.scaffold00043 94469 1 G A scaffold9196 Both SNP 0011.scaffold00043 94504 1 T C scaffold9196 Both SNP 0011.scaffold00043 94805 1 G A scaffold9196 Both SNP 0011.scaffold00043 94817 1 C T scaffold9196 Both SNP 0011.scaffold00043 94925 1 T A scaffold9196 Both SNP 0011.scaffold00043 95165 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 95171 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 95173 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 95207 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 95238 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 95249 1 C A scaffold9196 ScafM INDEL 0011.scaffold00043 95273 1 T . scaffold9196 ScafM SNP 0011.scaffold00043 95281 1 C A scaffold9196 ScafM INDEL 0011.scaffold00043 95288 10 .......... GTGAATATCT scaffold9196 ScafM SNP 0011.scaffold00043 95310 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 95331 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 95334 2 CT TC scaffold9196 ScafM SNP 0011.scaffold00043 95351 1 A G scaffold9196 ScafM INDEL 0011.scaffold00043 95379 4 ACTC .... scaffold9196 ScafM INDEL 0011.scaffold00043 95387 1 G . scaffold9196 ScafM INDEL 0011.scaffold00043 95389 2 AC .. scaffold9196 ScafM SNP 0011.scaffold00043 95418 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 95425 1 G C scaffold9196 ScafM INDEL 0011.scaffold00043 95444 3 CGC ... scaffold9196 ScafM SNP 0011.scaffold00043 95449 1 A T scaffold9196 Both SNP 0011.scaffold00043 95484 1 T G scaffold9196 Both SNP 0011.scaffold00043 95493 1 T G scaffold9196 Both SNP 0011.scaffold00043 95591 1 C A scaffold9196 Both SNP 0011.scaffold00043 95676 1 A G scaffold9196 Both SNP 0011.scaffold00043 95718 1 T A scaffold9196 Both SNP 0011.scaffold00043 95765 1 T G scaffold9196 ScafM INDEL 0011.scaffold00043 95770 1 . T scaffold9196 ScafM SNP 0011.scaffold00043 95816 1 C G scaffold9196 ScafM SNP 0011.scaffold00043 95850 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 95895 2 AA TG scaffold9196 ScafM SNP 0011.scaffold00043 95924 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 95932 1 G A scaffold9196 ScafM INDEL 0011.scaffold00043 95952 3 TGT ... scaffold9196 ScafM SNP 0011.scaffold00043 96018 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 96067 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 96069 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 96079 1 A C scaffold9196 ScafM INDEL 0011.scaffold00043 96084 2 .. TA scaffold9196 ScafM INDEL 0011.scaffold00043 96119 4 TATA .... scaffold9196 Both SNP 0011.scaffold00043 96246 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 96361 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 96588 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 97030 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 97075 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 97081 1 T A scaffold9196 ScafM SNP 0011.scaffold00043 97109 1 C A scaffold9196 ScafM INDEL 0011.scaffold00043 97158 8 CACTTGGA ........ scaffold9196 ScafM SNP 0011.scaffold00043 97180 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 97191 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 97202 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 97205 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 97207 1 T C scaffold9196 Both INDEL 0011.scaffold00043 97415 1 . G scaffold9196 ScafM INDEL 0011.scaffold00043 97529 7 TAGAAGA ....... scaffold9196 ReadM INDEL 0011.scaffold00043 97535 1 . G - Both SNP 0011.scaffold00043 97628 1 T C scaffold9196 Both SNP 0011.scaffold00043 98171 1 G A scaffold9196 Both SNP 0011.scaffold00043 98498 1 A G scaffold9196 Both SNP 0011.scaffold00043 98957 1 C G scaffold9196 Both SNP 0011.scaffold00043 98990 1 T G scaffold9196 Both SNP 0011.scaffold00043 99086 1 G A scaffold9196 Both INDEL 0011.scaffold00043 99169 1 T . scaffold9196 ScafM SNP 0011.scaffold00043 99190 1 T G scaffold9196 Both SNP 0011.scaffold00043 99396 1 A C scaffold9196 Both SNP 0011.scaffold00043 99424 1 T G scaffold9196 Both SNP 0011.scaffold00043 99438 1 C T scaffold9196 ScafM INDEL 0011.scaffold00043 99678 2 .. GT scaffold9196 ScafM SNP 0011.scaffold00043 99679 1 A T scaffold9196 ScafM INDEL 0011.scaffold00043 99700 1 T . scaffold9196 Both SNP 0011.scaffold00043 99807 1 C T scaffold9196 Both SNP 0011.scaffold00043 99829 1 T A scaffold9196 ReadM SNP 0011.scaffold00043 100109 1 C A - ReadM SNP 0011.scaffold00043 100148 1 T C - Both INDEL 0011.scaffold00043 100208 1 . C scaffold9196 Both SNP 0011.scaffold00043 100326 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 100416 1 T C scaffold9196 ScafM INDEL 0011.scaffold00043 100488 8 GTATTTTA ........ scaffold9196 ReadM SNP 0011.scaffold00043 100724 1 A G - ReadM SNP 0011.scaffold00043 100767 1 G A - ReadM SNP 0011.scaffold00043 100840 1 G A - ReadM SNP 0011.scaffold00043 100935 1 G T - ReadM SNP 0011.scaffold00043 100961 1 T A - ReadM SNP 0011.scaffold00043 100968 1 T C - ReadM SNP 0011.scaffold00043 101021 1 A T - ReadM INDEL 0011.scaffold00043 101249 2 AA .. - ReadM SNP 0011.scaffold00043 101301 1 A G - Both SNP 0011.scaffold00043 101327 1 T G scaffold9196 Both SNP 0011.scaffold00043 101436 1 G A scaffold9196 ReadM SNP 0011.scaffold00043 101504 1 C T - ReadM INDEL 0011.scaffold00043 101580 1 T . - ReadM SNP 0011.scaffold00043 101819 1 C T - ReadM SNP 0011.scaffold00043 101882 1 C T - ReadM INDEL 0011.scaffold00043 102275 1 . A - ReadM SNP 0011.scaffold00043 103943 1 A G - ReadM SNP 0011.scaffold00043 104225 1 C T - ReadM SNP 0011.scaffold00043 104264 1 C T - Both SNP 0011.scaffold00043 104394 1 A T scaffold9196 ReadM SNP 0011.scaffold00043 105126 1 A C - ReadM SNP 0011.scaffold00043 105186 1 A G - ReadM SNP 0011.scaffold00043 105254 1 C A - ReadM SNP 0011.scaffold00043 105276 1 C T - ReadM SNP 0011.scaffold00043 105301 1 A G - ReadM SNP 0011.scaffold00043 105343 1 T A - ScafM SNP 0011.scaffold00043 106766 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 106795 1 G T scaffold9196 ScafM SNP 0011.scaffold00043 106844 1 C G scaffold9196 ScafM SNP 0011.scaffold00043 106864 1 T A scaffold9196 ScafM INDEL 0011.scaffold00043 106910 2 .. AT scaffold9196 ScafM SNP 0011.scaffold00043 106917 1 A T scaffold9196 ScafM INDEL 0011.scaffold00043 106956 1 A . scaffold9196 ScafM SNP 0011.scaffold00043 107116 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 107166 1 C G scaffold9196 ReadM SNP 0011.scaffold00043 107254 1 G C - ReadM SNP 0011.scaffold00043 107402 1 A G - ReadM SNP 0011.scaffold00043 107559 1 C T - ReadM SNP 0011.scaffold00043 107677 1 T C - ReadM SNP 0011.scaffold00043 107698 1 G A - ReadM INDEL 0011.scaffold00043 107740 1 . G - ReadM SNP 0011.scaffold00043 107771 1 C T - ScafM SNP 0011.scaffold00043 107864 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 107871 2 CC TT scaffold9196 Both SNP 0011.scaffold00043 107918 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 108009 2 TG AT scaffold9196 Both SNP 0011.scaffold00043 108014 1 A T scaffold9196 ScafM SNP 0011.scaffold00043 108158 2 CA GG scaffold9196 ScafM SNP 0011.scaffold00043 108165 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 108174 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 108189 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 108201 1 C A scaffold9196 ScafM SNP 0011.scaffold00043 108205 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 108214 1 G A scaffold9196 Both SNP 0011.scaffold00043 108261 1 G T scaffold9196 Both SNP 0011.scaffold00043 108371 1 G A scaffold9196 Both SNP 0011.scaffold00043 108387 1 A G scaffold9196 Both SNP 0011.scaffold00043 108414 1 A G scaffold9196 ReadM SNP 0011.scaffold00043 108503 1 A G - ReadM SNP 0011.scaffold00043 108525 1 T C - ReadM SNP 0011.scaffold00043 108600 1 G C - ReadM SNP 0011.scaffold00043 108608 1 G A - Both SNP 0011.scaffold00043 108617 1 A G scaffold9196 ScafM INDEL 0011.scaffold00043 108644 7 ....... ATTCTTG scaffold9196 Both SNP 0011.scaffold00043 108670 1 A G scaffold9196 Both SNP 0011.scaffold00043 108708 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 108782 2 TT CA scaffold9196 Both SNP 0011.scaffold00043 108796 1 G T scaffold9196 Both SNP 0011.scaffold00043 108888 1 C G scaffold9196 Both SNP 0011.scaffold00043 108903 1 G T scaffold9196 Both SNP 0011.scaffold00043 108907 1 T C scaffold9196 ScafM INDEL 0011.scaffold00043 108941 8 ........ AGACTAAC scaffold9196 ScafM INDEL 0011.scaffold00043 108989 1 . T scaffold9196 ReadM SNP 0011.scaffold00043 109071 1 A T - ReadM SNP 0011.scaffold00043 109121 1 C G - ReadM SNP 0011.scaffold00043 109201 1 G A - ReadM SNP 0011.scaffold00043 109208 1 T C - ReadM SNP 0011.scaffold00043 109258 1 A G - ReadM INDEL 0011.scaffold00043 109324 1 A . - ReadM INDEL 0011.scaffold00043 109386 1 T . - ReadM SNP 0011.scaffold00043 109431 1 T A - Both SNP 0011.scaffold00043 109536 1 G A scaffold9196 Both SNP 0011.scaffold00043 109595 1 C T scaffold9196 Both SNP 0011.scaffold00043 109681 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 109692 1 A C scaffold9196 ScafM SNP 0011.scaffold00043 109727 1 G C scaffold9196 ScafM SNP 0011.scaffold00043 109743 1 C T scaffold9196 ScafM INDEL 0011.scaffold00043 109902 3 .AA TGC scaffold9196 ScafM SNP 0011.scaffold00043 109906 1 T G scaffold9196 ScafM INDEL 0011.scaffold00043 109917 1 . A scaffold9196 ScafM SNP 0011.scaffold00043 109931 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 109944 1 T C scaffold9196 ScafM INDEL 0011.scaffold00043 109967 1 . A scaffold9196 ScafM SNP 0011.scaffold00043 109975 1 G A scaffold9196 ScafM SNP 0011.scaffold00043 109996 2 CT TA scaffold9196 ScafM SNP 0011.scaffold00043 110006 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 110027 1 T G scaffold9196 ScafM SNP 0011.scaffold00043 110029 1 T C scaffold9196 ScafM SNP 0011.scaffold00043 110077 2 GA AT scaffold9196 ScafM SNP 0011.scaffold00043 110107 1 C T scaffold9196 ScafM INDEL 0011.scaffold00043 110109 1 T . scaffold9196 ScafM INDEL 0011.scaffold00043 110117 1 A . scaffold9196 ScafM SNP 0011.scaffold00043 110131 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 110172 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 110183 1 A G scaffold9196 ScafM INDEL 0011.scaffold00043 110195 1 . A scaffold9196 ScafM SNP 0011.scaffold00043 110203 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 110217 1 C T scaffold9196 ScafM SNP 0011.scaffold00043 110223 1 A G scaffold9196 ScafM SNP 0011.scaffold00043 113952 1 G C scaffold2030 ScafM SNP 0011.scaffold00043 113958 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 113966 1 A T scaffold2030 ScafM INDEL 0011.scaffold00043 113974 1 T . scaffold2030 ScafM INDEL 0011.scaffold00043 113976 4 ATGG .... scaffold2030 ScafM SNP 0011.scaffold00043 113982 1 A T scaffold2030 ScafM INDEL 0011.scaffold00043 113985 3 AGT ... scaffold2030 ScafM SNP 0011.scaffold00043 114047 1 A T scaffold2030 ScafM SNP 0011.scaffold00043 114096 1 T A scaffold2030 ScafM SNP 0011.scaffold00043 114674 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 114727 1 G C scaffold2030 ScafM SNP 0011.scaffold00043 114732 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 114740 1 C T scaffold2030 ReadM SNP 0011.scaffold00043 114937 1 G A - ReadM SNP 0011.scaffold00043 115123 1 G A - ScafM SNP 0011.scaffold00043 115204 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 115226 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 115234 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 115241 1 A T scaffold2030 ScafM SNP 0011.scaffold00043 115248 1 C G scaffold2030 ScafM SNP 0011.scaffold00043 115564 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 115576 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 115585 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 115602 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 115622 1 A G scaffold2030 ScafM SNP 0011.scaffold00043 119507 1 C A scaffold2030 ScafM SNP 0011.scaffold00043 119556 1 C A scaffold2030 ScafM SNP 0011.scaffold00043 119570 3 TCA AAT scaffold2030 ScafM SNP 0011.scaffold00043 119578 1 T C scaffold2030 ReadM SNP 0011.scaffold00043 119733 1 C T - ReadM SNP 0011.scaffold00043 119736 1 G A - ReadM SNP 0011.scaffold00043 119763 1 G A - ReadM SNP 0011.scaffold00043 119839 1 G A - ReadM SNP 0011.scaffold00043 119851 1 A T - ReadM SNP 0011.scaffold00043 119892 1 G A - ReadM SNP 0011.scaffold00043 120004 1 T C - ReadM SNP 0011.scaffold00043 120086 1 G C - ReadM SNP 0011.scaffold00043 120099 1 G A - ReadM SNP 0011.scaffold00043 120181 1 C T - ReadM SNP 0011.scaffold00043 120203 1 C T - ReadM SNP 0011.scaffold00043 120245 1 T A - ReadM SNP 0011.scaffold00043 120256 1 G A - ReadM SNP 0011.scaffold00043 120278 1 A C - ReadM SNP 0011.scaffold00043 120468 1 A G - ReadM SNP 0011.scaffold00043 120534 1 C T - ReadM SNP 0011.scaffold00043 120601 1 A T - ScafM SNP 0011.scaffold00043 121112 2 AC CT scaffold2030 Both SNP 0011.scaffold00043 121153 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 121246 1 G C scaffold2030 ScafM SNP 0011.scaffold00043 121248 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 121260 1 G A scaffold2030 ScafM INDEL 0011.scaffold00043 121277 6 CAGTTA ...... scaffold2030 ScafM SNP 0011.scaffold00043 121363 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 121374 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 121376 1 C G scaffold2030 ReadM SNP 0011.scaffold00043 121471 1 C T - ReadM SNP 0011.scaffold00043 121513 1 A G - ReadM SNP 0011.scaffold00043 121520 1 G A - ReadM SNP 0011.scaffold00043 121973 1 T C - ScafM SNP 0011.scaffold00043 122136 1 A G scaffold2030 ScafM SNP 0011.scaffold00043 122159 1 G A scaffold2030 ScafM INDEL 0011.scaffold00043 122219 1 . A scaffold2030 ScafM SNP 0011.scaffold00043 122264 1 C A scaffold2030 ScafM SNP 0011.scaffold00043 122275 1 G T scaffold2030 ScafM INDEL 0011.scaffold00043 122282 1 A . scaffold2030 ScafM SNP 0011.scaffold00043 122308 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 122322 1 T C scaffold2030 ScafM INDEL 0011.scaffold00043 122352 1 . C scaffold2030 ScafM INDEL 0011.scaffold00043 122365 4 AAAC .... scaffold2030 ScafM SNP 0011.scaffold00043 122385 1 C A scaffold2030 ScafM INDEL 0011.scaffold00043 122388 3 AAA ..C scaffold2030 ScafM SNP 0011.scaffold00043 122527 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 122599 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 123132 1 A C scaffold2030 Both SNP 0011.scaffold00043 123150 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 123153 1 G A scaffold2030 Both INDEL 0011.scaffold00043 123373 1 A . scaffold2030 Both SNP 0011.scaffold00043 123468 1 A G scaffold2030 Both SNP 0011.scaffold00043 123487 1 G A scaffold2030 Both SNP 0011.scaffold00043 123508 1 A T scaffold2030 ReadM INDEL 0011.scaffold00043 123635 1 . A - ReadM SNP 0011.scaffold00043 123800 1 C T - ReadM SNP 0011.scaffold00043 123845 1 G A - ReadM SNP 0011.scaffold00043 123873 1 G A - ReadM SNP 0011.scaffold00043 123895 1 T C - ScafM SNP 0011.scaffold00043 136491 1 T G scaffold2272 ScafM SNP 0011.scaffold00043 136525 1 T C scaffold2272 ScafM SNP 0011.scaffold00043 138131 1 T C scaffold9519 ScafM SNP 0011.scaffold00043 138156 1 T C scaffold9519 ScafM INDEL 0011.scaffold00043 140135 2 CG .. scaffold2030 ScafM INDEL 0011.scaffold00043 140138 2 GC .. scaffold2030 Both SNP 0011.scaffold00043 140216 1 G T scaffold2030 Both INDEL 0011.scaffold00043 140234 1 . G scaffold2030 ScafM SNP 0011.scaffold00043 140310 1 C A scaffold2030 ScafM INDEL 0011.scaffold00043 140343 4 GTAA .... scaffold2030 ScafM SNP 0011.scaffold00043 140351 1 C G scaffold2030 ScafM SNP 0011.scaffold00043 140408 1 A G scaffold2030 ScafM SNP 0011.scaffold00043 140427 1 G T scaffold2030 ScafM SNP 0011.scaffold00043 140445 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 140462 1 T C scaffold2030 ScafM INDEL 0011.scaffold00043 140464 2 TC .. scaffold2030 ScafM SNP 0011.scaffold00043 140483 1 A C scaffold2030 ScafM SNP 0011.scaffold00043 140531 1 G A scaffold2030 ScafM INDEL 0011.scaffold00043 140543 4 TATA .... scaffold2030 ScafM SNP 0011.scaffold00043 140558 1 A C scaffold2030 ScafM SNP 0011.scaffold00043 140562 1 G A scaffold2030 ScafM SNP 0011.scaffold00043 140567 1 G A scaffold2030 ScafM INDEL 0011.scaffold00043 140575 5 ..... TAAAT scaffold2030 ScafM SNP 0011.scaffold00043 140581 1 C T scaffold2030 ScafM SNP 0011.scaffold00043 140593 1 T A scaffold2030 ScafM INDEL 0011.scaffold00043 140601 2 .C TT scaffold2030 Both SNP 0011.scaffold00043 140629 1 C G scaffold2030 ReadM SNP 0011.scaffold00043 140718 1 G A - ReadM SNP 0011.scaffold00043 140735 1 T C - ScafM INDEL 0011.scaffold00043 140818 1 . G scaffold2030 ReadM SNP 0011.scaffold00043 141046 1 C T - ReadM SNP 0011.scaffold00043 141092 1 C G - ReadM SNP 0011.scaffold00043 141122 1 C T - ReadM SNP 0011.scaffold00043 141179 1 A G - ReadM SNP 0011.scaffold00043 141264 1 T A - ReadM SNP 0011.scaffold00043 141285 1 G C - ReadM SNP 0011.scaffold00043 141296 1 C T - ScafM INDEL 0011.scaffold00043 141536 4 .... ATAT scaffold2030 ScafM SNP 0011.scaffold00043 141601 1 A C scaffold2030 ScafM SNP 0011.scaffold00043 141657 1 A C scaffold2030 ScafM SNP 0011.scaffold00043 141661 1 T C scaffold2030 ScafM SNP 0011.scaffold00043 141677 1 T C scaffold2030 ReadM SNP 0012.scaffold00044 619 1 T C - ReadM SNP 0012.scaffold00044 695 1 T C - ReadM SNP 0012.scaffold00044 753 1 A G - ReadM SNP 0012.scaffold00044 765 1 T C - ReadM SNP 0012.scaffold00044 901 1 A T - ReadM SNP 0012.scaffold00044 1004 1 C T - ReadM SNP 0012.scaffold00044 1050 1 C T - Both SNP 0012.scaffold00044 1107 1 C T scaffold7954 Both SNP 0012.scaffold00044 1313 1 C A scaffold7954 Both SNP 0012.scaffold00044 1319 1 T C scaffold7954 Both SNP 0012.scaffold00044 1355 1 G A scaffold7954 ReadM INDEL 0012.scaffold00044 1433 1 T . - ScafM SNP 0012.scaffold00044 1475 2 GC TT scaffold7954 ReadM INDEL 0012.scaffold00044 1698 1 . A - ReadM INDEL 0012.scaffold00044 2534 1 A . - ReadM SNP 0012.scaffold00044 2834 1 A T - ReadM SNP 0012.scaffold00044 3518 1 G A - ReadM SNP 0012.scaffold00044 3700 1 T C - ReadM SNP 0012.scaffold00044 3746 1 T A - ReadM SNP 0012.scaffold00044 6098 1 G A - ReadM SNP 0012.scaffold00044 6456 1 C A - ReadM SNP 0012.scaffold00044 6489 1 A C - ReadM SNP 0012.scaffold00044 6925 1 C T - ReadM SNP 0012.scaffold00044 7021 1 G A - ReadM SNP 0012.scaffold00044 7499 1 T C - ReadM SNP 0012.scaffold00044 7660 1 A C - ReadM SNP 0012.scaffold00044 7791 1 G A - ReadM SNP 0012.scaffold00044 8837 1 A G - ReadM SNP 0012.scaffold00044 8984 1 G A - ReadM SNP 0012.scaffold00044 9073 1 T A - ReadM SNP 0012.scaffold00044 9272 1 C T - ReadM SNP 0012.scaffold00044 9363 1 A G - ReadM SNP 0012.scaffold00044 9500 1 T C - ReadM SNP 0012.scaffold00044 10756 1 G A - ReadM SNP 0012.scaffold00044 10786 1 A G - ReadM SNP 0012.scaffold00044 10937 1 C T - ReadM SNP 0012.scaffold00044 11134 1 A G - ReadM SNP 0012.scaffold00044 11469 1 A G - ReadM SNP 0012.scaffold00044 11472 1 T A - ReadM SNP 0012.scaffold00044 11522 1 A G - ScafM INDEL 0012.scaffold00044 11789 1 . T scaffold7954 Both SNP 0012.scaffold00044 11879 1 T C scaffold7954 Both SNP 0012.scaffold00044 11952 1 G T scaffold7954 ScafM INDEL 0012.scaffold00044 11970 2 TT .. scaffold7954 ReadM SNP 0012.scaffold00044 12205 1 G A - ReadM INDEL 0012.scaffold00044 12519 1 T . - ReadM SNP 0012.scaffold00044 12672 1 C T - ReadM SNP 0012.scaffold00044 13098 1 T C - ReadM SNP 0012.scaffold00044 13374 1 T C - ReadM SNP 0012.scaffold00044 13419 1 C T - ReadM SNP 0012.scaffold00044 13920 1 G A - ReadM SNP 0012.scaffold00044 14050 1 G C - ReadM SNP 0012.scaffold00044 14057 1 G A - ReadM SNP 0012.scaffold00044 14107 1 A C - ReadM SNP 0012.scaffold00044 14293 1 T C - ReadM SNP 0012.scaffold00044 14478 1 T C - ReadM SNP 0012.scaffold00044 14618 1 T G - ReadM SNP 0012.scaffold00044 14712 1 G T - ReadM SNP 0012.scaffold00044 14766 1 A G - ReadM SNP 0012.scaffold00044 14879 1 G A - ReadM SNP 0012.scaffold00044 15508 1 T C - ReadM SNP 0012.scaffold00044 15605 1 T G - ScafM SNP 0012.scaffold00044 17730 2 CA TT scaffold7954 ScafM SNP 0012.scaffold00044 17760 1 G A scaffold7954 ScafM SNP 0012.scaffold00044 19772 1 A T scaffold7954 ScafM SNP 0012.scaffold00044 19804 1 A G scaffold7954 Both SNP 0012.scaffold00044 19989 1 A T scaffold7954 ReadM SNP 0012.scaffold00044 20983 1 G A - ReadM SNP 0012.scaffold00044 20989 2 CG AT - ReadM SNP 0012.scaffold00044 21450 1 A T - ReadM SNP 0012.scaffold00044 21567 1 T C - ReadM SNP 0012.scaffold00044 21605 1 G A - ReadM SNP 0012.scaffold00044 22165 1 C T - ReadM SNP 0012.scaffold00044 22503 1 G T - ReadM SNP 0012.scaffold00044 23419 1 T C - ReadM SNP 0012.scaffold00044 23423 1 A G - ReadM SNP 0012.scaffold00044 24020 1 G A - ReadM SNP 0012.scaffold00044 24354 1 C G - ReadM SNP 0012.scaffold00044 24677 1 G A - ReadM SNP 0012.scaffold00044 24790 1 T G - ReadM SNP 0012.scaffold00044 25135 1 T C - ReadM SNP 0012.scaffold00044 25865 1 G A - ReadM SNP 0012.scaffold00044 26008 1 A T - ReadM SNP 0012.scaffold00044 26142 1 G C - Both SNP 0012.scaffold00044 26477 1 A T scaffold7954 Both SNP 0012.scaffold00044 26676 1 A G scaffold7954 ReadM SNP 0012.scaffold00044 26812 1 G A - ReadM SNP 0012.scaffold00044 27052 1 G A - ReadM SNP 0012.scaffold00044 27090 1 G C - ReadM SNP 0012.scaffold00044 27246 1 A T - ReadM SNP 0012.scaffold00044 27682 1 T G - ReadM SNP 0012.scaffold00044 27766 1 G A - ReadM SNP 0012.scaffold00044 27831 1 T C - ReadM SNP 0012.scaffold00044 28254 1 C T - ReadM INDEL 0012.scaffold00044 28256 1 C . - ReadM SNP 0012.scaffold00044 28356 1 A G - ReadM SNP 0012.scaffold00044 28378 1 G A - ReadM SNP 0012.scaffold00044 28823 1 T C - ReadM SNP 0012.scaffold00044 28909 2 TT CA - ReadM SNP 0012.scaffold00044 28967 1 C T - ReadM SNP 0012.scaffold00044 29088 1 T A - ReadM SNP 0012.scaffold00044 29683 1 T C - ReadM SNP 0012.scaffold00044 29764 1 A G - Both SNP 0012.scaffold00044 30176 1 G A scaffold7954 Both SNP 0012.scaffold00044 30195 1 C T scaffold7954 ReadM SNP 0012.scaffold00044 30922 1 G T - ReadM SNP 0012.scaffold00044 31406 1 A T - ReadM SNP 0012.scaffold00044 31494 1 T C - ReadM SNP 0012.scaffold00044 31672 1 T G - ReadM SNP 0012.scaffold00044 31699 1 G A - ReadM SNP 0012.scaffold00044 31922 1 T G - ReadM SNP 0012.scaffold00044 32090 1 T C - ReadM SNP 0012.scaffold00044 32209 1 G C - ReadM SNP 0012.scaffold00044 32319 1 A G - ReadM SNP 0012.scaffold00044 32324 1 A T - ScafM SNP 0012.scaffold00044 33281 1 G C scaffold7954 ScafM SNP 0012.scaffold00044 33317 1 A T scaffold7954 ScafM SNP 0012.scaffold00044 33359 1 A G scaffold7954 ScafM SNP 0012.scaffold00044 33486 1 T G scaffold7954 ScafM SNP 0012.scaffold00044 33492 1 A G scaffold7954 ReadM SNP 0012.scaffold00044 42815 1 C T - Both SNP 0012.scaffold00044 43206 1 G A C13518879 Both SNP 0012.scaffold00044 43242 1 A T C13518879 Both SNP 0012.scaffold00044 43354 1 A G C13518879 Both SNP 0012.scaffold00044 43626 1 T C C13518879 Both INDEL 0012.scaffold00044 43707 1 . T C13518879 ReadM SNP 0012.scaffold00044 43933 1 T C - ReadM SNP 0012.scaffold00044 43940 1 G A - ReadM SNP 0013.scaffold00046 413 1 C T - ScafM SNP 0013.scaffold00046 460 1 T C scaffold4540 ScafM INDEL 0013.scaffold00046 513 4 .... ATTC scaffold4540 Both SNP 0013.scaffold00046 574 1 A G scaffold4540 ReadM SNP 0013.scaffold00046 676 1 G T - ReadM SNP 0013.scaffold00046 731 1 G A - ReadM SNP 0013.scaffold00046 915 1 G A - Both SNP 0013.scaffold00046 1005 1 G A scaffold4540 ReadM SNP 0013.scaffold00046 1111 1 G C - ReadM SNP 0013.scaffold00046 1243 1 C T - ReadM SNP 0013.scaffold00046 1255 1 A C - ReadM SNP 0013.scaffold00046 1267 1 C T - ReadM SNP 0013.scaffold00046 1432 1 T C - ReadM SNP 0013.scaffold00046 1455 1 G A - ReadM SNP 0013.scaffold00046 1528 1 A G - ReadM SNP 0013.scaffold00046 1546 1 A G - ReadM SNP 0013.scaffold00046 1569 1 T A - ReadM SNP 0013.scaffold00046 1612 1 T C - ReadM SNP 0013.scaffold00046 1621 1 A G - ReadM SNP 0013.scaffold00046 1801 1 T C - ReadM SNP 0013.scaffold00046 1875 1 C T - ReadM SNP 0013.scaffold00046 1956 1 T G - ReadM SNP 0013.scaffold00046 1997 1 C T - ReadM SNP 0013.scaffold00046 2018 1 A G - ReadM SNP 0013.scaffold00046 2036 1 C T - ReadM INDEL 0013.scaffold00046 2171 2 AC .. - ReadM SNP 0013.scaffold00046 2262 1 C T - ReadM SNP 0013.scaffold00046 2276 1 C T - ReadM SNP 0013.scaffold00046 2338 1 G A - ReadM SNP 0013.scaffold00046 2352 1 G A - ReadM SNP 0013.scaffold00046 2477 1 A G - ReadM SNP 0013.scaffold00046 2489 1 G A - ReadM SNP 0013.scaffold00046 2543 1 G T - ReadM SNP 0013.scaffold00046 2584 1 G A - ReadM SNP 0013.scaffold00046 2831 1 G A - ReadM SNP 0013.scaffold00046 3136 1 T C - ReadM SNP 0013.scaffold00046 3155 1 G T - ReadM SNP 0013.scaffold00046 3254 1 A G - ReadM SNP 0013.scaffold00046 3417 1 G C - ReadM SNP 0013.scaffold00046 3447 1 A G - ReadM SNP 0013.scaffold00046 3620 1 C A - ReadM INDEL 0013.scaffold00046 3763 1 T . - ReadM SNP 0013.scaffold00046 3876 1 A G - ReadM SNP 0013.scaffold00046 3969 1 T C - ReadM SNP 0013.scaffold00046 4125 1 A G - ReadM SNP 0013.scaffold00046 4133 1 G T - ReadM SNP 0013.scaffold00046 4633 1 A T - ReadM SNP 0013.scaffold00046 4646 1 G A - ReadM SNP 0013.scaffold00046 4777 1 T C - ReadM INDEL 0013.scaffold00046 4794 1 G . - ReadM SNP 0013.scaffold00046 9750 1 C T - Both SNP 0013.scaffold00046 9850 1 G A scaffold9636 Both SNP 0013.scaffold00046 9919 1 C G scaffold9636 ReadM SNP 0013.scaffold00046 10330 1 C A - ScafM SNP 0013.scaffold00046 10690 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 10764 1 T C scaffold9636 Both SNP 0013.scaffold00046 10832 1 T C scaffold9636 ScafM INDEL 0013.scaffold00046 11120 2 AA .C scaffold9636 ScafM SNP 0013.scaffold00046 11492 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 11533 1 A G scaffold9636 Both SNP 0013.scaffold00046 11582 1 T C scaffold9636 Both INDEL 0013.scaffold00046 11657 1 . A scaffold9636 Both SNP 0013.scaffold00046 11751 1 C T scaffold9636 Both SNP 0013.scaffold00046 11753 1 A G scaffold9636 Both SNP 0013.scaffold00046 11904 1 C T scaffold9636 Both SNP 0013.scaffold00046 11978 1 A G scaffold9636 Both SNP 0013.scaffold00046 12139 1 A T scaffold9636 Both SNP 0013.scaffold00046 12455 1 C G scaffold9636 Both SNP 0013.scaffold00046 12505 1 A C scaffold9636 Both SNP 0013.scaffold00046 12754 1 C T scaffold9636 Both SNP 0013.scaffold00046 12773 1 T C scaffold9636 Both SNP 0013.scaffold00046 12916 1 C T scaffold9636 Both SNP 0013.scaffold00046 12935 1 A G scaffold9636 Both INDEL 0013.scaffold00046 12941 1 . T scaffold9636 Both SNP 0013.scaffold00046 12989 1 T C scaffold9636 Both SNP 0013.scaffold00046 12998 1 G A scaffold9636 Both INDEL 0013.scaffold00046 13043 1 . T scaffold9636 Both SNP 0013.scaffold00046 13117 1 G A scaffold9636 Both SNP 0013.scaffold00046 13146 1 C T scaffold9636 Both SNP 0013.scaffold00046 13186 1 A C scaffold9636 Both SNP 0013.scaffold00046 13319 1 C T scaffold9636 Both INDEL 0013.scaffold00046 13320 1 . G scaffold9636 Both SNP 0013.scaffold00046 13344 1 G A scaffold9636 ReadM SNP 0013.scaffold00046 13484 1 A G - ReadM SNP 0013.scaffold00046 13513 1 C T - ReadM SNP 0013.scaffold00046 13717 1 A G - ReadM SNP 0013.scaffold00046 13752 1 G A - ReadM SNP 0013.scaffold00046 13793 1 C T - ReadM SNP 0013.scaffold00046 13796 1 T C - ReadM SNP 0013.scaffold00046 13878 1 A G - ReadM SNP 0013.scaffold00046 13896 1 G A - ReadM SNP 0013.scaffold00046 13947 1 A G - ReadM SNP 0013.scaffold00046 13988 1 C G - ReadM INDEL 0013.scaffold00046 14005 1 C . - ReadM SNP 0013.scaffold00046 14183 1 T C - ReadM SNP 0013.scaffold00046 14187 1 G A - Both SNP 0013.scaffold00046 14241 1 A G scaffold9636 Both SNP 0013.scaffold00046 14271 1 A C scaffold9636 Both SNP 0013.scaffold00046 14390 1 C T scaffold9636 Both SNP 0013.scaffold00046 14437 1 A G scaffold9636 Both SNP 0013.scaffold00046 14650 1 A G scaffold9636 Both SNP 0013.scaffold00046 14680 1 T C scaffold9636 Both SNP 0013.scaffold00046 14846 1 T G scaffold9636 ReadM SNP 0013.scaffold00046 14982 1 T A - ReadM SNP 0013.scaffold00046 14987 1 T A - ReadM SNP 0013.scaffold00046 15081 1 C A - ReadM INDEL 0013.scaffold00046 15128 1 C . - Both SNP 0013.scaffold00046 15171 1 C T scaffold9636 Both SNP 0013.scaffold00046 15335 1 T A scaffold9636 Both SNP 0013.scaffold00046 15407 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 15551 1 C T scaffold9636 ReadM SNP 0013.scaffold00046 16552 1 A T - ReadM SNP 0013.scaffold00046 17529 1 T C - ReadM SNP 0013.scaffold00046 19750 1 G A - ReadM SNP 0013.scaffold00046 19903 1 A G - Both SNP 0013.scaffold00046 20616 1 T C scaffold5145 ReadM SNP 0013.scaffold00046 20679 1 C A - ReadM SNP 0013.scaffold00046 20885 1 T G - ReadM SNP 0013.scaffold00046 21257 1 C G - ReadM SNP 0013.scaffold00046 21582 1 A G - ReadM SNP 0013.scaffold00046 21872 1 A G - ScafM SNP 0013.scaffold00046 23182 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 23185 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 23197 1 A G scaffold9636 ScafM INDEL 0013.scaffold00046 23219 3 AAC ... scaffold9636 Both SNP 0013.scaffold00046 23425 1 C T scaffold9636 Both SNP 0013.scaffold00046 23430 1 C T scaffold9636 Both SNP 0013.scaffold00046 23446 1 A C scaffold9636 Both SNP 0013.scaffold00046 23521 1 C T scaffold9636 Both SNP 0013.scaffold00046 23665 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 23751 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 23992 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 24002 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24007 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 24017 1 A T scaffold9636 Both INDEL 0013.scaffold00046 24068 1 . T scaffold9636 Both SNP 0013.scaffold00046 24078 1 C A scaffold9636 Both SNP 0013.scaffold00046 24134 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24159 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 24174 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 24222 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24229 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24274 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 24280 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24300 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 24326 1 C T scaffold9636 Both SNP 0013.scaffold00046 24620 1 G A scaffold9636 ReadM SNP 0013.scaffold00046 24733 1 T C - Both SNP 0013.scaffold00046 24842 1 A T scaffold9636 Both SNP 0013.scaffold00046 24852 1 G T scaffold9636 Both SNP 0013.scaffold00046 24875 1 G A scaffold9636 ScafM INDEL 0013.scaffold00046 24911 2 AA .. scaffold9636 ScafM SNP 0013.scaffold00046 24922 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 24928 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 24935 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 24972 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 25148 1 T A scaffold9636 Both SNP 0013.scaffold00046 25216 1 A G scaffold9636 Both SNP 0013.scaffold00046 25252 1 T A scaffold9636 Both SNP 0013.scaffold00046 25369 1 A G scaffold9636 Both SNP 0013.scaffold00046 25395 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 25435 1 C T scaffold9636 Both SNP 0013.scaffold00046 25900 1 C A scaffold9636 Both SNP 0013.scaffold00046 26132 1 T A scaffold9636 Both SNP 0013.scaffold00046 26137 1 T C scaffold9636 Both SNP 0013.scaffold00046 26327 1 T C scaffold9636 Both INDEL 0013.scaffold00046 26356 1 . C scaffold9636 ScafM SNP 0013.scaffold00046 26361 1 T A scaffold9636 ScafM SNP 0013.scaffold00046 26459 1 G A scaffold9636 ScafM INDEL 0013.scaffold00046 26462 2 .. TA scaffold9636 ScafM INDEL 0013.scaffold00046 26464 1 . A scaffold9636 Both SNP 0013.scaffold00046 26473 1 A G scaffold9636 Both SNP 0013.scaffold00046 26666 1 T A scaffold9636 Both SNP 0013.scaffold00046 26794 1 T A scaffold9636 Both SNP 0013.scaffold00046 26814 1 A G scaffold9636 Both SNP 0013.scaffold00046 26864 1 G A scaffold9636 Both SNP 0013.scaffold00046 26994 1 T G scaffold9636 Both SNP 0013.scaffold00046 27592 1 C T scaffold9636 Both INDEL 0013.scaffold00046 27600 1 T . scaffold9636 Both SNP 0013.scaffold00046 27667 1 G A scaffold9636 Both SNP 0013.scaffold00046 27713 1 C T scaffold9636 Both SNP 0013.scaffold00046 27824 1 G A scaffold9636 Both SNP 0013.scaffold00046 27930 1 T C scaffold9636 Both SNP 0013.scaffold00046 28080 1 A G scaffold9636 Both SNP 0013.scaffold00046 28132 1 G A scaffold9636 Both SNP 0013.scaffold00046 28271 1 T A scaffold9636 Both SNP 0013.scaffold00046 28446 1 C T scaffold9636 Both SNP 0013.scaffold00046 28485 1 G A scaffold9636 Both SNP 0013.scaffold00046 28517 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 28626 1 T C scaffold9636 Both SNP 0013.scaffold00046 28743 1 T C scaffold9636 Both SNP 0013.scaffold00046 28781 1 G A scaffold9636 Both INDEL 0013.scaffold00046 28857 1 . A scaffold9636 Both SNP 0013.scaffold00046 28866 1 G A scaffold9636 Both SNP 0013.scaffold00046 28895 1 A T scaffold9636 Both INDEL 0013.scaffold00046 28906 1 . G scaffold9636 Both SNP 0013.scaffold00046 29022 1 G T scaffold9636 Both SNP 0013.scaffold00046 29164 1 C A scaffold9636 Both SNP 0013.scaffold00046 29198 1 C G scaffold9636 Both SNP 0013.scaffold00046 29202 1 C T scaffold9636 Both SNP 0013.scaffold00046 29271 1 T G scaffold9636 Both SNP 0013.scaffold00046 29664 1 A G scaffold9636 Both SNP 0013.scaffold00046 29794 1 A G scaffold9636 Both SNP 0013.scaffold00046 29796 1 A G scaffold9636 Both INDEL 0013.scaffold00046 29839 1 . T scaffold9636 ScafM SNP 0013.scaffold00046 31134 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 31606 1 A G scaffold9636 Both SNP 0013.scaffold00046 31824 1 A T scaffold9636 Both SNP 0013.scaffold00046 31925 1 C T scaffold9636 ScafM INDEL 0013.scaffold00046 32054 11 ........... GGGTCATGGGT scaffold9636 ScafM SNP 0013.scaffold00046 32066 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 32073 1 C G scaffold9636 Both SNP 0013.scaffold00046 32082 1 T A scaffold9636 ScafM INDEL 0013.scaffold00046 32218 2 .. TT scaffold9636 ScafM INDEL 0013.scaffold00046 32220 1 . G scaffold9636 ScafM INDEL 0013.scaffold00046 32223 25 ......................... TCTGGTAGGTGGAGTTACTTTGTTT scaffold9636 ScafM INDEL 0013.scaffold00046 32226 5 ..... TGAAA scaffold9636 Both SNP 0013.scaffold00046 32291 1 C T scaffold9636 Both SNP 0013.scaffold00046 32367 1 C A scaffold9636 Both SNP 0013.scaffold00046 32401 1 T A scaffold9636 ScafM INDEL 0013.scaffold00046 32424 2 .. TA scaffold9636 Both SNP 0013.scaffold00046 32444 1 A C scaffold9636 Both SNP 0013.scaffold00046 32488 1 T C scaffold9636 Both SNP 0013.scaffold00046 32518 1 T C scaffold9636 ScafM INDEL 0013.scaffold00046 32569 2 TT .. scaffold9636 Both INDEL 0013.scaffold00046 32582 1 . G scaffold9636 Both SNP 0013.scaffold00046 32742 1 G A scaffold9636 Both SNP 0013.scaffold00046 32853 1 G C scaffold9636 Both SNP 0013.scaffold00046 32880 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 32912 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 32915 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 32958 2 GA AT scaffold9636 Both SNP 0013.scaffold00046 33070 1 A C scaffold9636 Both SNP 0013.scaffold00046 33149 1 T G scaffold9636 Both SNP 0013.scaffold00046 33609 1 A T scaffold9636 Both SNP 0013.scaffold00046 33675 1 G T scaffold9636 Both SNP 0013.scaffold00046 33716 1 G A scaffold9636 ScafM INDEL 0013.scaffold00046 33806 8 ........ CCTTGCCT scaffold9636 Both SNP 0013.scaffold00046 33874 1 T C scaffold9636 Both SNP 0013.scaffold00046 33951 1 T C scaffold9636 Both SNP 0013.scaffold00046 34017 1 C T scaffold9636 Both SNP 0013.scaffold00046 34124 1 G A scaffold9636 Both SNP 0013.scaffold00046 34129 1 A G scaffold9636 ReadM SNP 0013.scaffold00046 34231 1 C T - ReadM SNP 0013.scaffold00046 34233 1 A G - ReadM SNP 0013.scaffold00046 34286 1 T A - Both SNP 0013.scaffold00046 34449 1 G C scaffold9636 Both SNP 0013.scaffold00046 34814 1 G T scaffold9636 ScafM INDEL 0013.scaffold00046 35038 8 CCATTTGA ........ scaffold9636 ScafM INDEL 0013.scaffold00046 35084 1 G . scaffold9636 ScafM SNP 0013.scaffold00046 35113 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 35125 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 35140 1 A G scaffold9636 ScafM INDEL 0013.scaffold00046 35221 1 . T scaffold9636 ScafM SNP 0013.scaffold00046 35235 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 35239 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 35247 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 35256 1 T A scaffold9636 ScafM SNP 0013.scaffold00046 35308 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 35349 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 35378 2 CC TG scaffold9636 ScafM INDEL 0013.scaffold00046 35389 2 .. TT scaffold9636 ScafM SNP 0013.scaffold00046 35396 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 35402 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 35404 1 G T scaffold9636 ScafM INDEL 0013.scaffold00046 35406 1 A . scaffold9636 ScafM SNP 0013.scaffold00046 35409 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 35413 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 35424 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 35445 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 35448 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 35459 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 35463 2 TT CG scaffold9636 ScafM SNP 0013.scaffold00046 35471 2 TA GG scaffold9636 ScafM SNP 0013.scaffold00046 35485 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 35490 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 35516 2 GG CT scaffold9636 ScafM SNP 0013.scaffold00046 35545 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 35562 1 A G scaffold9636 ScafM INDEL 0013.scaffold00046 35573 2 .. CA scaffold9636 ScafM INDEL 0013.scaffold00046 35574 2 .G TT scaffold9636 ScafM INDEL 0013.scaffold00046 35579 4 .... CTAT scaffold9636 ScafM INDEL 0013.scaffold00046 35582 1 . G scaffold9636 ScafM SNP 0013.scaffold00046 35596 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 35606 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 35608 2 TT CC scaffold9636 ScafM SNP 0013.scaffold00046 35612 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 35640 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 35646 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 35652 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 35654 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 35662 2 GA AG scaffold9636 ScafM SNP 0013.scaffold00046 35670 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 35680 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 37387 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 37392 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 37401 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 37445 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 37456 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 37463 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 37475 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 37480 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 37486 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 37505 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 37535 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 37538 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 37954 2 TC AT scaffold9636 ScafM SNP 0013.scaffold00046 40493 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 40507 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 40523 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 40539 1 G C scaffold9636 ScafM INDEL 0013.scaffold00046 40574 3 TAC ... scaffold9636 ScafM SNP 0013.scaffold00046 40599 1 T A scaffold9636 ScafM SNP 0013.scaffold00046 40611 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 40667 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40669 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 40674 2 CG GT scaffold9636 ScafM SNP 0013.scaffold00046 40679 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40715 2 AA TG scaffold9636 ScafM SNP 0013.scaffold00046 40723 1 C T scaffold9636 ScafM INDEL 0013.scaffold00046 40727 3 ... ATT scaffold9636 ScafM SNP 0013.scaffold00046 40728 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 40732 2 AG GA scaffold9636 ScafM INDEL 0013.scaffold00046 40744 8 ........ AGGTCGTG scaffold9636 ScafM INDEL 0013.scaffold00046 40745 2 .. CA scaffold9636 ScafM SNP 0013.scaffold00046 40767 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40775 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40783 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 40792 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 40798 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 40819 1 C G scaffold9636 ScafM SNP 0013.scaffold00046 40835 1 T G scaffold9636 ScafM SNP 0013.scaffold00046 40848 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 40858 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 40891 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40893 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 40901 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 40906 1 C G scaffold9636 ScafM SNP 0013.scaffold00046 40940 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 40956 1 T G scaffold9636 ScafM INDEL 0013.scaffold00046 40961 1 T . scaffold9636 ScafM SNP 0013.scaffold00046 41004 1 C G scaffold9636 ScafM SNP 0013.scaffold00046 41019 1 A G scaffold9636 ScafM INDEL 0013.scaffold00046 41025 1 C . scaffold9636 ScafM SNP 0013.scaffold00046 41027 2 GT AC scaffold9636 ScafM SNP 0013.scaffold00046 41034 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 41048 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 41091 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 41104 1 T A scaffold9636 ScafM SNP 0013.scaffold00046 41106 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 41121 1 C A scaffold9636 ScafM INDEL 0013.scaffold00046 41127 1 . T scaffold9636 ScafM SNP 0013.scaffold00046 41148 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 41175 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 41197 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 41250 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 41254 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 41267 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 41278 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 41286 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 41317 1 T A scaffold9636 ScafM INDEL 0013.scaffold00046 41320 2 TT .. scaffold9636 ScafM INDEL 0013.scaffold00046 41350 2 .. AA scaffold9636 ScafM SNP 0013.scaffold00046 41355 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 41486 1 A G scaffold9636 ScafM SNP 0013.scaffold00046 41500 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 41553 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 41559 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 41577 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 41624 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 41630 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 41654 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 41662 1 C A scaffold9636 ScafM SNP 0013.scaffold00046 41670 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 41681 1 G C scaffold9636 ScafM SNP 0013.scaffold00046 41685 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 41699 2 AT GC scaffold9636 ScafM SNP 0013.scaffold00046 41702 1 G A scaffold9636 ScafM SNP 0013.scaffold00046 41709 1 C T scaffold9636 ScafM SNP 0013.scaffold00046 41731 1 T C scaffold9636 ScafM SNP 0013.scaffold00046 41764 1 C T scaffold9636 ScafM INDEL 0013.scaffold00046 41766 5 ..... GATTG scaffold9636 ScafM INDEL 0013.scaffold00046 41777 4 .... ATTT scaffold9636 ScafM INDEL 0013.scaffold00046 41790 1 T . scaffold9636 ScafM SNP 0013.scaffold00046 41797 1 A C scaffold9636 ScafM SNP 0013.scaffold00046 41815 1 A T scaffold9636 ScafM SNP 0013.scaffold00046 41819 1 G T scaffold9636 ScafM SNP 0013.scaffold00046 41826 2 CA AG scaffold9636 ScafM INDEL 0013.scaffold00046 41836 1 . A scaffold9636 ReadM SNP 0014.scaffold00049 9299 1 C T - ReadM SNP 0014.scaffold00049 9487 1 T C - ReadM SNP 0014.scaffold00049 9589 1 C T - ReadM SNP 0014.scaffold00049 9599 1 C T - ReadM SNP 0014.scaffold00049 9722 1 T A - ReadM SNP 0014.scaffold00049 9815 1 T G - ReadM SNP 0014.scaffold00049 9903 1 T C - ReadM SNP 0014.scaffold00049 9916 1 T C - ReadM SNP 0014.scaffold00049 9966 1 G T - ReadM SNP 0014.scaffold00049 10027 1 G A - ReadM SNP 0014.scaffold00049 10064 1 T C - ReadM SNP 0014.scaffold00049 10109 1 G A - ReadM SNP 0014.scaffold00049 10157 1 A T - ReadM SNP 0014.scaffold00049 10163 1 C T - ReadM SNP 0014.scaffold00049 10205 1 C A - ReadM SNP 0014.scaffold00049 10213 1 A G - ReadM SNP 0014.scaffold00049 10266 1 A G - ReadM SNP 0014.scaffold00049 10288 1 A C - ReadM SNP 0014.scaffold00049 10409 1 C T - ReadM SNP 0014.scaffold00049 10545 1 T C - ReadM SNP 0014.scaffold00049 10664 1 A T - ReadM SNP 0014.scaffold00049 10760 1 T C - ScafM SNP 0014.scaffold00049 16448 1 A T scaffold5115 ScafM SNP 0014.scaffold00049 16470 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 16556 1 A T scaffold5115 ScafM INDEL 0014.scaffold00049 16573 3 AGA .TT scaffold5115 ScafM SNP 0014.scaffold00049 16600 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 16663 2 CT AC scaffold5115 ScafM SNP 0014.scaffold00049 16696 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 16972 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 16975 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 16978 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 17126 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 17143 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 17153 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 17188 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 17199 2 AG GA scaffold5115 ScafM SNP 0014.scaffold00049 17211 1 A G scaffold5115 ScafM INDEL 0014.scaffold00049 17231 1 . C scaffold5115 ScafM SNP 0014.scaffold00049 17240 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 17250 1 C G scaffold5115 ScafM INDEL 0014.scaffold00049 17502 1 G . scaffold5115 ScafM SNP 0014.scaffold00049 17528 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 17538 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 17598 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 17606 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 17609 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 17637 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 17671 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 17678 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 17693 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 17704 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 17730 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 17761 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 17789 1 T C scaffold5115 ReadM SNP 0014.scaffold00049 19173 1 G C - ReadM SNP 0014.scaffold00049 19222 1 A T - ReadM SNP 0014.scaffold00049 19234 1 T C - ReadM SNP 0014.scaffold00049 19422 1 T C - ReadM SNP 0014.scaffold00049 19477 1 G T - ReadM SNP 0014.scaffold00049 19484 1 A G - ReadM SNP 0014.scaffold00049 19677 1 T G - ReadM SNP 0014.scaffold00049 19745 1 C T - Both SNP 0014.scaffold00049 19908 1 A T scaffold5115 Both SNP 0014.scaffold00049 19963 1 T C scaffold5115 Both SNP 0014.scaffold00049 20198 1 A G scaffold5115 Both SNP 0014.scaffold00049 20218 1 G A scaffold5115 ScafM INDEL 0014.scaffold00049 20256 1 . A scaffold5115 Both SNP 0014.scaffold00049 20273 1 T A scaffold5115 Both SNP 0014.scaffold00049 20338 1 A C scaffold5115 Both SNP 0014.scaffold00049 20424 1 A G scaffold5115 Both SNP 0014.scaffold00049 20470 1 C G scaffold5115 Both SNP 0014.scaffold00049 20496 1 C A scaffold5115 Both SNP 0014.scaffold00049 20621 1 G A scaffold5115 Both SNP 0014.scaffold00049 20696 1 A C scaffold5115 Both SNP 0014.scaffold00049 20710 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 20819 1 A T scaffold5115 ScafM SNP 0014.scaffold00049 20822 1 G A scaffold5115 Both SNP 0014.scaffold00049 20897 1 A G scaffold5115 Both SNP 0014.scaffold00049 20949 1 G C scaffold5115 Both SNP 0014.scaffold00049 20966 1 A C scaffold5115 ReadM SNP 0014.scaffold00049 21012 1 T A - Both SNP 0014.scaffold00049 21030 1 A G scaffold5115 ScafM INDEL 0014.scaffold00049 21081 1 A . scaffold5115 ScafM SNP 0014.scaffold00049 21111 1 C A scaffold5115 Both SNP 0014.scaffold00049 21122 1 T C scaffold5115 Both SNP 0014.scaffold00049 21178 1 C G scaffold5115 Both SNP 0014.scaffold00049 21218 1 C T scaffold5115 Both SNP 0014.scaffold00049 21328 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 21355 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 21360 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 21363 1 C A scaffold5115 Both SNP 0014.scaffold00049 21385 1 T G scaffold5115 Both SNP 0014.scaffold00049 21437 1 T A scaffold5115 Both SNP 0014.scaffold00049 21506 1 T G scaffold5115 Both SNP 0014.scaffold00049 21533 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 21586 1 A G scaffold5115 Both SNP 0014.scaffold00049 21589 1 A G scaffold5115 Both SNP 0014.scaffold00049 21624 1 C T scaffold5115 Both SNP 0014.scaffold00049 21629 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 21684 1 T G scaffold5115 Both SNP 0014.scaffold00049 21710 1 A T scaffold5115 Both SNP 0014.scaffold00049 21780 1 C G scaffold5115 Both SNP 0014.scaffold00049 21789 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 21867 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 21873 1 G C scaffold5115 Both SNP 0014.scaffold00049 21963 1 G A scaffold5115 Both SNP 0014.scaffold00049 22010 1 A C scaffold5115 Both SNP 0014.scaffold00049 22074 1 A G scaffold5115 Both SNP 0014.scaffold00049 22078 1 G A scaffold5115 Both SNP 0014.scaffold00049 22283 1 G T scaffold5115 Both SNP 0014.scaffold00049 22398 1 A T scaffold5115 Both SNP 0014.scaffold00049 22413 1 G A scaffold5115 Both SNP 0014.scaffold00049 22469 1 C T scaffold5115 Both SNP 0014.scaffold00049 22665 1 T A scaffold5115 Both SNP 0014.scaffold00049 22964 1 A C scaffold5115 Both SNP 0014.scaffold00049 23045 1 A G scaffold5115 Both SNP 0014.scaffold00049 23057 1 T G scaffold5115 Both SNP 0014.scaffold00049 23098 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 23106 1 T G scaffold5115 Both SNP 0014.scaffold00049 23152 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 23192 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 23199 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 23216 2 CA AT scaffold5115 ScafM SNP 0014.scaffold00049 23226 1 C G scaffold5115 ScafM INDEL 0014.scaffold00049 23334 2 .. AA scaffold5115 ScafM SNP 0014.scaffold00049 23357 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 23365 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 23394 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 23401 1 C T scaffold5115 ScafM INDEL 0014.scaffold00049 23541 1 . T scaffold5115 ScafM INDEL 0014.scaffold00049 23545 1 G . scaffold5115 Both SNP 0014.scaffold00049 23589 1 A G scaffold5115 Both SNP 0014.scaffold00049 23605 1 C T scaffold5115 Both SNP 0014.scaffold00049 23636 1 T C scaffold5115 Both SNP 0014.scaffold00049 23852 1 T A scaffold5115 Both SNP 0014.scaffold00049 23915 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 23949 1 A G scaffold5115 Both SNP 0014.scaffold00049 24019 1 C T scaffold5115 Both SNP 0014.scaffold00049 24045 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 24101 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 24109 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 24132 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 24139 1 G A scaffold5115 Both INDEL 0014.scaffold00049 24242 1 A . scaffold5115 Both SNP 0014.scaffold00049 24283 1 A G scaffold5115 Both SNP 0014.scaffold00049 24293 1 T C scaffold5115 Both SNP 0014.scaffold00049 24332 1 T A scaffold5115 Both SNP 0014.scaffold00049 24350 1 T C scaffold5115 Both SNP 0014.scaffold00049 24376 1 T A scaffold5115 Both SNP 0014.scaffold00049 24422 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 24440 2 AG TA scaffold5115 Both SNP 0014.scaffold00049 24481 1 A G scaffold5115 Both SNP 0014.scaffold00049 24536 1 G T scaffold5115 Both SNP 0014.scaffold00049 24551 1 A T scaffold5115 Both SNP 0014.scaffold00049 24590 1 G A scaffold5115 Both SNP 0014.scaffold00049 24654 1 G T scaffold5115 Both SNP 0014.scaffold00049 24739 1 G T scaffold5115 Both SNP 0014.scaffold00049 24814 1 G A scaffold5115 Both SNP 0014.scaffold00049 24899 1 C T scaffold5115 Both SNP 0014.scaffold00049 24925 1 G T scaffold5115 Both SNP 0014.scaffold00049 24936 1 A G scaffold5115 Both SNP 0014.scaffold00049 25036 1 A G scaffold5115 Both SNP 0014.scaffold00049 25058 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 25082 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 25105 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 25139 2 AT CA scaffold5115 ScafM INDEL 0014.scaffold00049 25160 3 GAT ... scaffold5115 Both SNP 0014.scaffold00049 25235 1 T A scaffold5115 Both SNP 0014.scaffold00049 25389 1 C G scaffold5115 Both SNP 0014.scaffold00049 25484 1 C A scaffold5115 Both SNP 0014.scaffold00049 25574 1 C A scaffold5115 Both SNP 0014.scaffold00049 25617 1 C A scaffold5115 Both SNP 0014.scaffold00049 25670 1 T C scaffold5115 Both SNP 0014.scaffold00049 25711 1 A G scaffold5115 Both SNP 0014.scaffold00049 25722 1 A G scaffold5115 ScafM INDEL 0014.scaffold00049 25753 1 A . scaffold5115 ScafM SNP 0014.scaffold00049 25758 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 25760 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 25768 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 25798 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 25802 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 25874 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 25889 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 25903 1 C T scaffold5115 Both SNP 0014.scaffold00049 25926 1 T C scaffold5115 Both SNP 0014.scaffold00049 25980 1 A G scaffold5115 Both SNP 0014.scaffold00049 25988 1 A G scaffold5115 Both SNP 0014.scaffold00049 26057 1 T G scaffold5115 Both SNP 0014.scaffold00049 26116 1 T G scaffold5115 Both SNP 0014.scaffold00049 26138 1 A C scaffold5115 Both SNP 0014.scaffold00049 26211 1 A G scaffold5115 Both SNP 0014.scaffold00049 26412 1 G T scaffold5115 Both SNP 0014.scaffold00049 26432 1 A G scaffold5115 Both SNP 0014.scaffold00049 26673 1 G A scaffold5115 Both SNP 0014.scaffold00049 26676 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 26804 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 26810 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 26823 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 26852 2 AC GG scaffold5115 ScafM SNP 0014.scaffold00049 26864 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 26914 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 26923 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 26967 1 G A scaffold5115 ScafM INDEL 0014.scaffold00049 26974 1 A . scaffold5115 ScafM SNP 0014.scaffold00049 26993 1 C T scaffold5115 Both SNP 0014.scaffold00049 27024 1 C T scaffold5115 Both SNP 0014.scaffold00049 27104 1 A G scaffold5115 Both SNP 0014.scaffold00049 27177 1 A G scaffold5115 Both SNP 0014.scaffold00049 27239 1 C T scaffold5115 Both SNP 0014.scaffold00049 27282 1 G A scaffold5115 Both SNP 0014.scaffold00049 27295 1 G C scaffold5115 Both SNP 0014.scaffold00049 27298 1 G A scaffold5115 Both SNP 0014.scaffold00049 27401 1 T G scaffold5115 Both SNP 0014.scaffold00049 27421 1 G T scaffold5115 Both SNP 0014.scaffold00049 27481 1 T A scaffold5115 Both SNP 0014.scaffold00049 27534 1 T C scaffold5115 Both SNP 0014.scaffold00049 27582 1 G A scaffold5115 Both SNP 0014.scaffold00049 27603 1 A C scaffold5115 Both SNP 0014.scaffold00049 27639 1 T C scaffold5115 Both SNP 0014.scaffold00049 27661 1 A G scaffold5115 ReadM SNP 0014.scaffold00049 27707 1 A C - ReadM SNP 0014.scaffold00049 27715 1 A C - ReadM SNP 0014.scaffold00049 27770 1 A C - ReadM SNP 0014.scaffold00049 27824 1 A G - Both SNP 0014.scaffold00049 27890 1 A C scaffold5115 Both SNP 0014.scaffold00049 27898 1 C T scaffold5115 Both SNP 0014.scaffold00049 27909 1 A T scaffold5115 Both SNP 0014.scaffold00049 27985 1 T C scaffold5115 Both SNP 0014.scaffold00049 28134 1 C A scaffold5115 Both SNP 0014.scaffold00049 28192 1 T G scaffold5115 Both SNP 0014.scaffold00049 28257 1 T C scaffold5115 Both SNP 0014.scaffold00049 28335 1 A G scaffold5115 Both SNP 0014.scaffold00049 28428 1 G C scaffold5115 ReadM SNP 0014.scaffold00049 28442 1 A G - ReadM SNP 0014.scaffold00049 28484 1 A G - ReadM SNP 0014.scaffold00049 28515 1 T G - ReadM SNP 0014.scaffold00049 28597 1 A C - ReadM SNP 0014.scaffold00049 28605 1 G A - ReadM SNP 0014.scaffold00049 28707 1 C T - ReadM SNP 0014.scaffold00049 28780 1 A C - ReadM SNP 0014.scaffold00049 28976 1 C T - ReadM SNP 0014.scaffold00049 29018 1 T C - ReadM SNP 0014.scaffold00049 29102 1 G T - Both SNP 0014.scaffold00049 29136 1 G A scaffold5115 Both SNP 0014.scaffold00049 29174 1 G A scaffold5115 Both SNP 0014.scaffold00049 29283 1 T C scaffold5115 Both SNP 0014.scaffold00049 29344 1 G C scaffold5115 Both SNP 0014.scaffold00049 29400 1 A T scaffold5115 Both SNP 0014.scaffold00049 29404 1 T C scaffold5115 Both SNP 0014.scaffold00049 29475 1 G T scaffold5115 Both SNP 0014.scaffold00049 29483 1 A T scaffold5115 ScafM INDEL 0014.scaffold00049 29531 7 AAATATC ....... scaffold5115 ScafM SNP 0014.scaffold00049 29694 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 29713 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 29720 1 A T scaffold5115 ScafM SNP 0014.scaffold00049 29736 1 C T scaffold5115 ReadM SNP 0014.scaffold00049 31573 1 A G - ReadM SNP 0014.scaffold00049 38940 1 T C - ReadM SNP 0014.scaffold00049 38998 1 A G - ReadM SNP 0014.scaffold00049 39017 2 CC TT - ReadM SNP 0014.scaffold00049 39155 1 A G - ReadM SNP 0014.scaffold00049 39184 1 C A - ReadM SNP 0014.scaffold00049 39278 1 G A - ReadM SNP 0014.scaffold00049 39486 1 A G - ReadM SNP 0014.scaffold00049 40430 1 C T - ReadM SNP 0014.scaffold00049 40472 1 G C - ReadM SNP 0014.scaffold00049 40494 1 A G - ReadM SNP 0014.scaffold00049 40534 1 A T - ReadM SNP 0014.scaffold00049 41207 1 A C - ReadM SNP 0014.scaffold00049 41261 1 G C - ReadM INDEL 0014.scaffold00049 41397 1 C . - ReadM SNP 0014.scaffold00049 41443 1 T C - ReadM SNP 0014.scaffold00049 41521 1 A G - ReadM SNP 0014.scaffold00049 41528 1 A C - ReadM SNP 0014.scaffold00049 41637 1 A G - ScafM SNP 0014.scaffold00049 42181 1 A T scaffold5115 ScafM SNP 0014.scaffold00049 42263 1 C A scaffold5115 ScafM INDEL 0014.scaffold00049 42335 2 .. AT scaffold5115 ScafM INDEL 0014.scaffold00049 42336 8 ........ CTTCACCA scaffold5115 ScafM SNP 0014.scaffold00049 42380 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 42419 1 G A scaffold5115 Both SNP 0014.scaffold00049 42447 1 A T scaffold5115 Both SNP 0014.scaffold00049 42524 1 G C scaffold5115 Both SNP 0014.scaffold00049 42526 1 T A scaffold5115 Both SNP 0014.scaffold00049 42605 1 C T scaffold5115 Both SNP 0014.scaffold00049 42637 1 T A scaffold5115 Both SNP 0014.scaffold00049 42664 1 C T scaffold5115 Both SNP 0014.scaffold00049 42701 1 G A scaffold5115 Both SNP 0014.scaffold00049 42799 1 A G scaffold5115 ReadM SNP 0014.scaffold00049 42859 1 G A - ReadM SNP 0014.scaffold00049 42906 1 T C - ReadM SNP 0014.scaffold00049 42939 1 A G - Both SNP 0014.scaffold00049 43024 1 T A scaffold5115 ReadM SNP 0014.scaffold00049 43112 1 G A - ReadM SNP 0014.scaffold00049 43219 1 C T - ReadM SNP 0014.scaffold00049 43301 1 C T - ReadM SNP 0014.scaffold00049 43320 1 G A - ReadM SNP 0014.scaffold00049 43329 1 T C - ReadM SNP 0014.scaffold00049 43352 1 A G - ReadM SNP 0014.scaffold00049 43467 1 C G - ReadM SNP 0014.scaffold00049 43499 1 A G - ReadM SNP 0014.scaffold00049 43532 1 C G - ReadM SNP 0014.scaffold00049 43564 1 G A - ReadM SNP 0014.scaffold00049 43568 1 G A - ReadM SNP 0014.scaffold00049 43614 1 C T - ReadM SNP 0014.scaffold00049 43636 1 C T - ReadM SNP 0014.scaffold00049 43726 1 A T - ReadM SNP 0014.scaffold00049 43744 1 A G - ReadM SNP 0014.scaffold00049 43752 1 C T - ReadM SNP 0014.scaffold00049 43880 1 T G - ReadM SNP 0014.scaffold00049 43965 1 G A - ReadM SNP 0014.scaffold00049 43997 1 C T - ScafM SNP 0014.scaffold00049 44118 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 44187 1 T A scaffold5115 ReadM INDEL 0014.scaffold00049 44921 2 TG .. - ReadM SNP 0014.scaffold00049 45099 1 A C - ReadM SNP 0014.scaffold00049 45173 1 T C - ReadM SNP 0014.scaffold00049 45179 1 A T - ReadM SNP 0014.scaffold00049 45260 1 C T - ReadM SNP 0014.scaffold00049 45460 1 T A - ReadM SNP 0014.scaffold00049 45496 1 C T - ReadM SNP 0014.scaffold00049 45583 1 G C - ReadM SNP 0014.scaffold00049 45596 1 A G - ReadM INDEL 0014.scaffold00049 45637 1 . C - ReadM SNP 0014.scaffold00049 45716 1 C T - ReadM SNP 0014.scaffold00049 45899 1 C T - ReadM SNP 0014.scaffold00049 45951 1 G A - ReadM SNP 0014.scaffold00049 46025 1 A C - ReadM SNP 0014.scaffold00049 46046 1 A G - ReadM SNP 0014.scaffold00049 46146 1 C G - ReadM SNP 0014.scaffold00049 46166 1 G T - Both SNP 0014.scaffold00049 46286 1 C T scaffold5115 Both INDEL 0014.scaffold00049 46337 1 . A scaffold5115 Both SNP 0014.scaffold00049 46399 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 46455 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 46475 1 C G scaffold5115 Both SNP 0014.scaffold00049 46547 1 T C scaffold5115 Both SNP 0014.scaffold00049 46559 1 G A scaffold5115 Both SNP 0014.scaffold00049 46640 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 46741 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 46746 2 CA AG scaffold5115 ScafM SNP 0014.scaffold00049 46758 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 46768 1 A C scaffold5115 Both SNP 0014.scaffold00049 46945 1 C G scaffold5115 ReadM SNP 0014.scaffold00049 46953 1 T G - ReadM SNP 0014.scaffold00049 46959 1 G A - ReadM SNP 0014.scaffold00049 47118 1 A G - ReadM SNP 0014.scaffold00049 47131 1 T G - Both SNP 0014.scaffold00049 47161 1 T C scaffold5115 ReadM SNP 0014.scaffold00049 47281 1 T C - ReadM SNP 0014.scaffold00049 47289 1 A T - ReadM SNP 0014.scaffold00049 47599 1 C T - ReadM SNP 0014.scaffold00049 47697 1 T A - ReadM SNP 0014.scaffold00049 47777 1 T A - ReadM SNP 0014.scaffold00049 47846 1 G A - ReadM SNP 0014.scaffold00049 47862 1 A G - ReadM SNP 0014.scaffold00049 48080 1 G T - ScafM INDEL 0014.scaffold00049 48501 2 AA .. scaffold5115 ScafM SNP 0014.scaffold00049 48504 1 A T scaffold5115 ScafM SNP 0014.scaffold00049 48541 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 48554 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 48561 1 A G scaffold5115 Both SNP 0014.scaffold00049 48565 1 C A scaffold5115 Both SNP 0014.scaffold00049 48734 1 T C scaffold5115 Both SNP 0014.scaffold00049 48803 1 T C scaffold5115 Both SNP 0014.scaffold00049 48869 1 G C scaffold5115 Both SNP 0014.scaffold00049 48929 1 A T scaffold5115 ReadM SNP 0014.scaffold00049 49104 1 C T - ReadM SNP 0014.scaffold00049 49129 1 T C - ReadM SNP 0014.scaffold00049 49239 1 T C - ReadM SNP 0014.scaffold00049 49316 1 T C - ReadM SNP 0014.scaffold00049 49335 1 G T - ReadM SNP 0014.scaffold00049 49373 1 G A - ReadM SNP 0014.scaffold00049 49500 1 A G - ReadM SNP 0014.scaffold00049 49585 1 T A - ScafM INDEL 0014.scaffold00049 49701 4 AAAA ...T scaffold5115 ReadM SNP 0014.scaffold00049 49783 1 A G - ReadM SNP 0014.scaffold00049 49820 1 C T - ReadM SNP 0014.scaffold00049 50023 1 A C - Both SNP 0014.scaffold00049 50145 1 C T scaffold5115 Both SNP 0014.scaffold00049 50415 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 50417 1 C T scaffold5115 Both SNP 0014.scaffold00049 50493 1 C T scaffold5115 Both SNP 0014.scaffold00049 50504 1 C T scaffold5115 ScafM INDEL 0014.scaffold00049 50583 3 GTT ... scaffold5115 ScafM SNP 0014.scaffold00049 50653 1 A C scaffold5115 ScafM INDEL 0014.scaffold00049 50677 1 T . scaffold5115 ScafM SNP 0014.scaffold00049 50699 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 50712 1 G A scaffold5115 Both SNP 0014.scaffold00049 50758 1 A G scaffold5115 Both SNP 0014.scaffold00049 50819 1 C A scaffold5115 Both SNP 0014.scaffold00049 50864 1 G A scaffold5115 Both SNP 0014.scaffold00049 50889 1 T A scaffold5115 Both SNP 0014.scaffold00049 50907 1 T C scaffold5115 Both INDEL 0014.scaffold00049 51140 1 T . scaffold5115 Both SNP 0014.scaffold00049 51158 1 T C scaffold5115 ReadM SNP 0014.scaffold00049 51293 1 G A - ReadM SNP 0014.scaffold00049 51461 1 T C - ReadM SNP 0014.scaffold00049 51517 1 A G - ReadM SNP 0014.scaffold00049 51544 1 C T - ReadM SNP 0014.scaffold00049 51551 1 G A - ReadM SNP 0014.scaffold00049 52131 1 G A - ReadM SNP 0014.scaffold00049 52181 1 A G - ReadM SNP 0014.scaffold00049 52426 1 G C - ReadM SNP 0014.scaffold00049 52447 1 T A - ReadM SNP 0014.scaffold00049 52562 1 T C - ReadM SNP 0014.scaffold00049 52587 1 A C - ReadM SNP 0014.scaffold00049 52632 1 T G - ReadM SNP 0014.scaffold00049 52680 1 A G - ReadM SNP 0014.scaffold00049 52734 1 A G - ReadM SNP 0014.scaffold00049 52941 1 A C - ReadM SNP 0014.scaffold00049 52989 1 C A - ReadM SNP 0014.scaffold00049 53082 1 G T - ReadM SNP 0014.scaffold00049 53093 1 G A - ReadM SNP 0014.scaffold00049 53104 1 T C - ReadM SNP 0014.scaffold00049 53142 1 T A - ReadM SNP 0014.scaffold00049 53214 1 A G - ReadM SNP 0014.scaffold00049 53297 1 T C - ReadM SNP 0014.scaffold00049 53318 1 T A - ReadM SNP 0014.scaffold00049 53325 1 G T - ReadM SNP 0014.scaffold00049 53420 1 C A - ReadM SNP 0014.scaffold00049 53449 1 A G - Both SNP 0014.scaffold00049 53509 1 T A scaffold5115 ReadM SNP 0014.scaffold00049 53552 1 G C - ReadM INDEL 0014.scaffold00049 53574 1 . T - ReadM SNP 0014.scaffold00049 53611 1 G A - ReadM SNP 0014.scaffold00049 53635 1 C G - ReadM SNP 0014.scaffold00049 53743 1 C T - ReadM SNP 0014.scaffold00049 53771 1 A T - ReadM INDEL 0014.scaffold00049 53775 1 T . - ReadM SNP 0014.scaffold00049 53863 1 C A - ReadM SNP 0014.scaffold00049 53897 1 C A - ReadM SNP 0014.scaffold00049 53990 1 G C - ReadM SNP 0014.scaffold00049 54006 1 A T - ReadM SNP 0014.scaffold00049 54012 1 G A - Both SNP 0014.scaffold00049 54129 1 T A scaffold5115 Both SNP 0014.scaffold00049 54137 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 54212 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 54283 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 54349 1 G T scaffold5115 Both SNP 0014.scaffold00049 55502 1 A G scaffold5115 Both SNP 0014.scaffold00049 55520 1 A T scaffold5115 Both SNP 0014.scaffold00049 55590 1 T C scaffold5115 Both SNP 0014.scaffold00049 55716 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 55893 2 AA TT scaffold5115 ReadM SNP 0014.scaffold00049 55935 1 G T - ReadM INDEL 0014.scaffold00049 56169 1 T . - ReadM SNP 0014.scaffold00049 56255 1 T C - ReadM SNP 0014.scaffold00049 56467 1 C A - ReadM SNP 0014.scaffold00049 56550 1 C T - ReadM SNP 0014.scaffold00049 56623 1 G A - ReadM SNP 0014.scaffold00049 56841 1 C T - ReadM SNP 0014.scaffold00049 56864 1 T C - ReadM INDEL 0014.scaffold00049 56874 1 A . - ReadM SNP 0014.scaffold00049 57045 1 T A - ReadM INDEL 0014.scaffold00049 57113 1 T . - ReadM INDEL 0014.scaffold00049 57142 1 . A - ReadM SNP 0014.scaffold00049 57152 1 A G - Both SNP 0014.scaffold00049 57288 1 G A scaffold5115 Both SNP 0014.scaffold00049 57311 1 G A scaffold5115 Both SNP 0014.scaffold00049 57383 1 A G scaffold5115 Both SNP 0014.scaffold00049 57386 1 T C scaffold5115 Both SNP 0014.scaffold00049 57461 1 A T scaffold5115 Both SNP 0014.scaffold00049 57509 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 57526 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 57532 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 57550 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 57554 1 G T scaffold5115 Both SNP 0014.scaffold00049 57606 1 C A scaffold5115 Both SNP 0014.scaffold00049 57625 1 T C scaffold5115 ReadM INDEL 0014.scaffold00049 57671 1 T . - ReadM SNP 0014.scaffold00049 57773 1 T C - Both SNP 0014.scaffold00049 58099 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 58292 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 58295 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 58308 1 A G scaffold5115 ReadM SNP 0014.scaffold00049 58459 1 G A - ScafM SNP 0014.scaffold00049 58532 1 T C scaffold5115 ReadM SNP 0014.scaffold00049 58594 1 C G - ScafM SNP 0014.scaffold00049 58981 1 C T scaffold5115 Both SNP 0014.scaffold00049 59114 1 T C scaffold5115 Both SNP 0014.scaffold00049 59120 1 A T scaffold5115 Both SNP 0014.scaffold00049 59135 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 59173 1 T G scaffold5115 Both SNP 0014.scaffold00049 59290 1 A G scaffold5115 Both SNP 0014.scaffold00049 59370 1 T C scaffold5115 Both SNP 0014.scaffold00049 59474 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 59499 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 59533 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 59544 1 G A scaffold5115 Both SNP 0014.scaffold00049 59570 1 T G scaffold5115 Both SNP 0014.scaffold00049 59618 1 T G scaffold5115 ScafM INDEL 0014.scaffold00049 59654 3 ATG ... scaffold5115 ScafM SNP 0014.scaffold00049 59664 1 T G scaffold5115 ScafM INDEL 0014.scaffold00049 59667 1 A . scaffold5115 ScafM SNP 0014.scaffold00049 59691 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 59701 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 59727 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 59763 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 59785 1 C G scaffold5115 ScafM INDEL 0014.scaffold00049 59792 2 AA .. scaffold5115 ScafM SNP 0014.scaffold00049 59821 1 A G scaffold5115 ScafM INDEL 0014.scaffold00049 59832 8 ........ CTATTGCC scaffold5115 ScafM SNP 0014.scaffold00049 59840 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 59853 1 T C scaffold5115 ScafM INDEL 0014.scaffold00049 59862 13 AAAAAAAAAAACA .....TTTTTTTT scaffold5115 ScafM INDEL 0014.scaffold00049 59877 1 C . scaffold5115 ScafM INDEL 0014.scaffold00049 59883 4 AACT .... scaffold5115 Both SNP 0014.scaffold00049 59927 1 C A scaffold5115 Both SNP 0014.scaffold00049 59929 1 G A scaffold5115 Both SNP 0014.scaffold00049 60001 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 60035 1 C T scaffold5115 ScafM INDEL 0014.scaffold00049 60075 2 .. AA scaffold5115 Both SNP 0014.scaffold00049 60145 1 T G scaffold5115 ReadM SNP 0014.scaffold00049 60227 1 C T - ScafM INDEL 0014.scaffold00049 60371 1 . A scaffold5115 ScafM SNP 0014.scaffold00049 60373 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 60376 1 T A scaffold5115 ScafM INDEL 0014.scaffold00049 60409 3 TAT ... scaffold5115 ScafM SNP 0014.scaffold00049 60521 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 60563 1 T G scaffold5115 Both SNP 0014.scaffold00049 60654 1 T A scaffold5115 Both SNP 0014.scaffold00049 60663 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 60699 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 60765 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 60770 1 T C scaffold5115 ScafM SNP 0014.scaffold00049 60815 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 60837 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 60870 1 G T scaffold5115 ReadM SNP 0014.scaffold00049 67336 1 A C - ReadM SNP 0014.scaffold00049 67392 1 A G - ReadM SNP 0014.scaffold00049 67401 1 C T - ReadM SNP 0014.scaffold00049 67424 1 G T - ReadM SNP 0014.scaffold00049 67472 1 T G - ScafM SNP 0014.scaffold00049 67538 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 67559 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 67567 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 67587 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 67595 1 T C scaffold5115 Both SNP 0014.scaffold00049 67632 1 T G scaffold5115 Both SNP 0014.scaffold00049 67662 1 T A scaffold5115 Both SNP 0014.scaffold00049 67730 1 A G scaffold5115 Both SNP 0014.scaffold00049 67744 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 67875 1 T A scaffold5115 ScafM SNP 0014.scaffold00049 67887 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 67939 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 67953 1 A G scaffold5115 ReadM SNP 0014.scaffold00049 68009 1 C G - ReadM SNP 0014.scaffold00049 68051 1 C T - ReadM SNP 0014.scaffold00049 68588 1 A T - ReadM SNP 0014.scaffold00049 68646 1 G A - Both SNP 0014.scaffold00049 68745 1 A G scaffold5115 Both SNP 0014.scaffold00049 68812 1 G A scaffold5115 Both SNP 0014.scaffold00049 68845 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 68854 1 C T scaffold5115 ScafM INDEL 0014.scaffold00049 68943 1 . G scaffold5115 ScafM SNP 0014.scaffold00049 68945 1 A G scaffold5115 ScafM INDEL 0014.scaffold00049 68967 4 .... GAAG scaffold5115 ReadM SNP 0014.scaffold00049 68992 1 G C - ReadM SNP 0014.scaffold00049 69042 1 C G - ReadM SNP 0014.scaffold00049 69355 1 T C - ScafM INDEL 0014.scaffold00049 69743 3 ... TTT scaffold5115 ScafM SNP 0014.scaffold00049 69875 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 69885 1 T C scaffold5115 ScafM INDEL 0014.scaffold00049 69915 2 AA .. scaffold5115 ScafM INDEL 0014.scaffold00049 70006 22 ...................... ATAAGGTTTTTGTTATATATAT scaffold5115 ScafM SNP 0014.scaffold00049 70107 1 C T scaffold5115 ReadM SNP 0014.scaffold00049 70383 1 A G - ReadM SNP 0014.scaffold00049 70414 1 G T - ReadM SNP 0014.scaffold00049 70434 1 G T - ReadM SNP 0014.scaffold00049 70475 1 A G - ReadM SNP 0014.scaffold00049 70512 1 C A - ReadM SNP 0014.scaffold00049 70550 1 A G - ReadM SNP 0014.scaffold00049 70596 1 G T - ReadM SNP 0014.scaffold00049 70608 1 A G - ReadM SNP 0014.scaffold00049 70716 1 A T - ReadM SNP 0014.scaffold00049 70746 1 C T - ReadM SNP 0014.scaffold00049 70847 1 T G - ReadM SNP 0014.scaffold00049 70933 1 A G - ScafM SNP 0014.scaffold00049 71578 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 71614 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 71632 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 71634 2 GA AC scaffold5115 ScafM SNP 0014.scaffold00049 71647 1 G T scaffold5115 ScafM SNP 0014.scaffold00049 71649 1 A T scaffold5115 Both SNP 0014.scaffold00049 71680 1 T G scaffold5115 Both SNP 0014.scaffold00049 71700 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 71750 1 C G scaffold5115 ScafM SNP 0014.scaffold00049 71763 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 71782 1 T G scaffold5115 ScafM INDEL 0014.scaffold00049 71843 2 .. TA scaffold5115 ScafM SNP 0014.scaffold00049 71857 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 71934 1 G C scaffold5115 ScafM SNP 0014.scaffold00049 71946 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 71951 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 71974 1 A C scaffold5115 ScafM SNP 0014.scaffold00049 71990 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 72016 2 CT AA scaffold5115 ScafM SNP 0014.scaffold00049 72022 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 72043 1 G A scaffold5115 ScafM SNP 0014.scaffold00049 72056 1 C A scaffold5115 ScafM SNP 0014.scaffold00049 72060 1 C T scaffold5115 ScafM SNP 0014.scaffold00049 72066 1 T G scaffold5115 ScafM SNP 0014.scaffold00049 72142 1 A G scaffold5115 ScafM SNP 0014.scaffold00049 72203 1 C T scaffold5115 ReadM SNP 0014.scaffold00049 88392 1 T A - ReadM SNP 0014.scaffold00049 88411 1 T A - ReadM SNP 0014.scaffold00049 91144 1 A T - ReadM SNP 0014.scaffold00049 91523 1 G C - ReadM SNP 0014.scaffold00049 92944 1 T C - ReadM INDEL 0014.scaffold00049 92997 1 A . - ReadM SNP 0014.scaffold00049 93009 1 G C - ReadM SNP 0014.scaffold00049 93590 1 A C - ReadM SNP 0014.scaffold00049 93593 1 G C - ReadM SNP 0014.scaffold00049 93777 1 C T - ReadM SNP 0014.scaffold00049 93961 1 T A - ReadM SNP 0014.scaffold00049 95713 1 G A - ReadM SNP 0014.scaffold00049 95770 1 G A - ReadM SNP 0014.scaffold00049 95913 1 A G - ReadM SNP 0014.scaffold00049 95943 1 T A - ReadM SNP 0014.scaffold00049 95952 1 A G - ReadM SNP 0014.scaffold00049 95977 1 C T - ReadM SNP 0014.scaffold00049 96034 1 C A - ReadM SNP 0014.scaffold00049 96044 1 T A - ReadM SNP 0014.scaffold00049 96119 1 T C - ReadM SNP 0014.scaffold00049 96132 1 G T - ReadM SNP 0014.scaffold00049 96254 1 A T - ReadM SNP 0014.scaffold00049 96513 1 T C - ReadM SNP 0014.scaffold00049 96531 1 C T - ReadM SNP 0014.scaffold00049 96642 1 G T - ReadM SNP 0014.scaffold00049 96662 1 T G - ReadM SNP 0014.scaffold00049 96700 1 T A - ReadM SNP 0014.scaffold00049 96721 1 G C - ReadM SNP 0014.scaffold00049 96748 1 C A - ReadM SNP 0014.scaffold00049 96835 1 T C - ReadM SNP 0014.scaffold00049 96864 1 G A - ReadM SNP 0014.scaffold00049 96890 1 A G - ReadM SNP 0014.scaffold00049 96969 1 T C - ReadM SNP 0014.scaffold00049 96976 1 G A - ReadM SNP 0014.scaffold00049 97018 1 A T - Both SNP 0014.scaffold00049 97081 1 G C scaffold2615 Both SNP 0014.scaffold00049 97098 1 T C scaffold2615 Both SNP 0014.scaffold00049 97102 1 T C scaffold2615 Both SNP 0014.scaffold00049 97139 1 A T scaffold2615 Both SNP 0014.scaffold00049 97159 1 C G scaffold2615 Both SNP 0014.scaffold00049 97209 1 G A scaffold2615 Both SNP 0014.scaffold00049 97276 1 G A scaffold2615 Both SNP 0014.scaffold00049 97289 1 G A scaffold2615 Both SNP 0014.scaffold00049 97295 1 T C scaffold2615 ReadM INDEL 0014.scaffold00049 97423 1 . T - ReadM SNP 0014.scaffold00049 97443 1 T C - ReadM SNP 0014.scaffold00049 97707 1 A G - ReadM SNP 0014.scaffold00049 97833 1 A T - ReadM SNP 0014.scaffold00049 97853 1 G A - ReadM SNP 0014.scaffold00049 97888 1 C T - ReadM SNP 0014.scaffold00049 97913 1 T C - ReadM SNP 0014.scaffold00049 97942 1 A G - ReadM SNP 0014.scaffold00049 97966 1 C T - ReadM SNP 0014.scaffold00049 98027 1 C T - ReadM SNP 0014.scaffold00049 98142 1 G A - ReadM SNP 0014.scaffold00049 98149 1 C G - ReadM SNP 0014.scaffold00049 98235 1 T C - ReadM SNP 0014.scaffold00049 98278 1 A T - ReadM SNP 0014.scaffold00049 98324 1 T C - ReadM SNP 0014.scaffold00049 98362 1 C T - ReadM SNP 0014.scaffold00049 98587 1 T G - ReadM SNP 0014.scaffold00049 98637 1 C G - ReadM SNP 0014.scaffold00049 98664 1 A T - ReadM SNP 0014.scaffold00049 98732 1 A G - ReadM SNP 0014.scaffold00049 98804 1 A G - ReadM SNP 0014.scaffold00049 98820 1 C A - ReadM SNP 0014.scaffold00049 98902 1 A G - ReadM SNP 0014.scaffold00049 98925 1 A G - ReadM SNP 0014.scaffold00049 99119 1 C T - ReadM SNP 0014.scaffold00049 99124 1 G A - ReadM SNP 0014.scaffold00049 99140 1 A G - ReadM INDEL 0014.scaffold00049 99168 1 . G - ReadM SNP 0014.scaffold00049 99315 1 T A - ReadM SNP 0014.scaffold00049 99336 1 C T - ReadM SNP 0014.scaffold00049 99470 1 A G - ReadM SNP 0014.scaffold00049 99494 1 C T - ReadM SNP 0014.scaffold00049 99506 1 C G - ReadM SNP 0014.scaffold00049 99538 1 A G - ReadM SNP 0014.scaffold00049 99563 1 T G - ReadM SNP 0014.scaffold00049 99576 1 C T - ReadM SNP 0014.scaffold00049 99703 1 G A - ReadM SNP 0014.scaffold00049 99739 1 T C - ReadM SNP 0014.scaffold00049 99748 1 T A - ReadM SNP 0014.scaffold00049 99886 1 C T - ReadM SNP 0014.scaffold00049 99928 1 G A - ReadM SNP 0014.scaffold00049 100059 1 A C - ReadM SNP 0014.scaffold00049 100106 1 C T - ReadM SNP 0014.scaffold00049 100110 1 A T - ReadM SNP 0014.scaffold00049 100122 1 A G - ReadM SNP 0014.scaffold00049 100234 1 C T - ReadM SNP 0014.scaffold00049 100385 1 C T - ReadM SNP 0014.scaffold00049 100437 1 T C - ReadM SNP 0014.scaffold00049 100439 1 G T - ReadM SNP 0014.scaffold00049 100518 1 G T - ReadM SNP 0014.scaffold00049 100551 1 T G - ReadM SNP 0014.scaffold00049 100562 1 A G - ReadM SNP 0014.scaffold00049 100682 1 T C - ReadM SNP 0014.scaffold00049 100898 1 T C - ReadM SNP 0014.scaffold00049 100947 1 T C - ReadM INDEL 0014.scaffold00049 101020 1 A . - ScafM SNP 0014.scaffold00049 101574 1 T C scaffold2615 Both INDEL 0014.scaffold00049 101632 1 . G scaffold2615 Both SNP 0014.scaffold00049 101686 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 101744 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 101769 2 TG CC scaffold2615 Both SNP 0014.scaffold00049 101781 1 T A scaffold2615 Both SNP 0014.scaffold00049 101794 1 A C scaffold2615 ReadM SNP 0014.scaffold00049 101878 1 C T - Both SNP 0014.scaffold00049 101943 1 A G scaffold2615 Both SNP 0014.scaffold00049 101997 1 G C scaffold2615 ReadM SNP 0014.scaffold00049 102037 1 T C - ReadM SNP 0014.scaffold00049 102039 1 G A - ReadM SNP 0014.scaffold00049 102049 1 G A - ReadM SNP 0014.scaffold00049 102129 1 A T - ReadM SNP 0014.scaffold00049 102164 1 C T - ReadM SNP 0014.scaffold00049 102167 1 A C - ReadM SNP 0014.scaffold00049 102302 1 G A - ReadM SNP 0014.scaffold00049 102344 1 C T - ReadM SNP 0014.scaffold00049 102465 1 T C - ReadM SNP 0014.scaffold00049 102510 1 T C - ReadM SNP 0014.scaffold00049 102645 1 T C - ReadM SNP 0014.scaffold00049 102673 1 G A - ReadM SNP 0014.scaffold00049 102717 1 A G - ReadM SNP 0014.scaffold00049 102798 1 G C - ReadM SNP 0014.scaffold00049 102896 1 G A - ReadM SNP 0014.scaffold00049 102930 1 A G - ReadM INDEL 0014.scaffold00049 103043 1 . T - ReadM SNP 0014.scaffold00049 103177 1 G A - ReadM SNP 0014.scaffold00049 103193 1 G A - ReadM SNP 0014.scaffold00049 103198 1 T A - ReadM SNP 0014.scaffold00049 103291 1 C A - ReadM SNP 0014.scaffold00049 103342 1 G C - ReadM SNP 0014.scaffold00049 103369 1 A T - ReadM SNP 0014.scaffold00049 103379 1 G A - ReadM SNP 0014.scaffold00049 103395 1 A G - ReadM SNP 0014.scaffold00049 103465 1 G C - ReadM SNP 0014.scaffold00049 103502 1 A G - ReadM SNP 0014.scaffold00049 103540 1 T C - ReadM SNP 0014.scaffold00049 103784 1 G T - ReadM SNP 0014.scaffold00049 103808 1 G A - ReadM SNP 0014.scaffold00049 103816 1 T C - Both SNP 0014.scaffold00049 103863 1 C A scaffold2615 Both SNP 0014.scaffold00049 103915 1 T C scaffold2615 Both SNP 0014.scaffold00049 103923 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 103949 2 GG AC scaffold2615 ScafM INDEL 0014.scaffold00049 103991 7 ....... GCGATAC scaffold2615 ScafM INDEL 0014.scaffold00049 103992 1 . G scaffold2615 ScafM SNP 0014.scaffold00049 104002 2 AT CC scaffold2615 ScafM SNP 0014.scaffold00049 104059 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 104065 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 104067 1 G A scaffold2615 ReadM SNP 0014.scaffold00049 104128 1 G A - ReadM SNP 0014.scaffold00049 104141 1 C T - ReadM INDEL 0014.scaffold00049 104224 1 C . - ScafM SNP 0014.scaffold00049 104302 2 CA AC scaffold2615 Both SNP 0014.scaffold00049 104437 1 G A scaffold2615 ReadM SNP 0014.scaffold00049 104638 1 G C - ScafM SNP 0014.scaffold00049 104798 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 104802 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 104826 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 104855 7 ....... CTGTATC scaffold2615 Both SNP 0014.scaffold00049 104938 1 T G scaffold2615 Both SNP 0014.scaffold00049 104952 1 G A scaffold2615 Both SNP 0014.scaffold00049 104976 1 T A scaffold2615 ScafM INDEL 0014.scaffold00049 105152 7 ATACGTG ....... scaffold2615 ScafM INDEL 0014.scaffold00049 105330 1 A . scaffold2615 ScafM SNP 0014.scaffold00049 105380 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 105435 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 105439 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 105665 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 105810 2 AC GG scaffold2615 ScafM SNP 0014.scaffold00049 105814 1 G C scaffold2615 Both SNP 0014.scaffold00049 105915 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 106026 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 106037 1 T A scaffold2615 Both SNP 0014.scaffold00049 106093 1 A C scaffold2615 Both SNP 0014.scaffold00049 106105 1 A T scaffold2615 Both SNP 0014.scaffold00049 106263 1 T A scaffold2615 Both SNP 0014.scaffold00049 106340 1 A G scaffold2615 Both SNP 0014.scaffold00049 106358 1 A G scaffold2615 Both SNP 0014.scaffold00049 106372 1 G T scaffold2615 ScafM INDEL 0014.scaffold00049 106484 1 T . scaffold2615 Both INDEL 0014.scaffold00049 106505 1 . A scaffold2615 Both SNP 0014.scaffold00049 106606 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 106667 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 106767 1 C T scaffold2615 Both SNP 0014.scaffold00049 106971 1 A G scaffold2615 Both SNP 0014.scaffold00049 106978 1 A G scaffold2615 Both SNP 0014.scaffold00049 107064 1 T C scaffold2615 Both SNP 0014.scaffold00049 107067 1 A G scaffold2615 Both SNP 0014.scaffold00049 107072 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 107243 2 .. TC scaffold2615 ScafM SNP 0014.scaffold00049 107372 1 C G scaffold2615 ScafM INDEL 0014.scaffold00049 107451 5 ..... TTATA scaffold2615 ScafM SNP 0014.scaffold00049 108846 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 109488 1 C T scaffold2615 ReadM SNP 0014.scaffold00049 110117 1 A C - ReadM SNP 0014.scaffold00049 110183 1 A C - ReadM SNP 0014.scaffold00049 110314 1 A T - ScafM SNP 0014.scaffold00049 110421 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 110512 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 110649 1 . T scaffold2615 ScafM SNP 0014.scaffold00049 110666 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 110687 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 110798 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 110856 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 110956 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 110959 1 T A scaffold2615 ScafM INDEL 0014.scaffold00049 110972 1 . G scaffold2615 ScafM SNP 0014.scaffold00049 110993 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 111172 1 T A scaffold2615 ScafM INDEL 0014.scaffold00049 111205 1 T . scaffold2615 ScafM SNP 0014.scaffold00049 111216 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 111234 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 111493 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 112158 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 112202 1 G A scaffold2615 Both SNP 0014.scaffold00049 112291 1 C G scaffold2615 ScafM INDEL 0014.scaffold00049 112367 35 ................................... TAGGCGAGCGACAATCCGGTGTTGTTGATGAATCG scaffold2615 ScafM SNP 0014.scaffold00049 112378 1 A T scaffold2615 ScafM INDEL 0014.scaffold00049 112404 1 . T scaffold2615 ScafM INDEL 0014.scaffold00049 112485 1 C . scaffold2615 ScafM INDEL 0014.scaffold00049 112493 2 TT .. scaffold2615 ReadM SNP 0014.scaffold00049 112558 1 C T - ReadM SNP 0014.scaffold00049 114327 1 C T - ReadM SNP 0014.scaffold00049 114406 1 T C - ScafM SNP 0014.scaffold00049 114468 1 T A scaffold2615 Both SNP 0014.scaffold00049 114496 1 C T scaffold2615 ReadM SNP 0014.scaffold00049 114552 1 G A - ReadM SNP 0014.scaffold00049 114744 1 T C - ReadM SNP 0014.scaffold00049 114881 1 T C - ReadM SNP 0014.scaffold00049 115067 1 T C - ReadM SNP 0014.scaffold00049 115156 1 C A - ReadM INDEL 0014.scaffold00049 115185 1 . A - ReadM SNP 0014.scaffold00049 115216 1 G A - ReadM SNP 0014.scaffold00049 115309 1 G A - ReadM SNP 0014.scaffold00049 115360 1 G T - ReadM SNP 0014.scaffold00049 115563 1 G A - ReadM SNP 0014.scaffold00049 115661 1 C A - ReadM SNP 0014.scaffold00049 115673 1 G A - ReadM SNP 0014.scaffold00049 115682 1 C A - ReadM SNP 0014.scaffold00049 115808 1 G A - ReadM SNP 0014.scaffold00049 115825 1 T A - ReadM SNP 0014.scaffold00049 115940 1 A C - ReadM SNP 0014.scaffold00049 115986 1 G A - ReadM INDEL 0014.scaffold00049 116052 1 G . - ReadM SNP 0014.scaffold00049 116121 1 G A - ReadM SNP 0014.scaffold00049 116130 1 A G - ReadM SNP 0014.scaffold00049 116141 1 T G - ReadM SNP 0014.scaffold00049 116209 1 T C - ReadM SNP 0014.scaffold00049 116225 1 T A - ReadM SNP 0014.scaffold00049 116241 1 A G - ReadM SNP 0014.scaffold00049 116267 1 C T - ReadM SNP 0014.scaffold00049 116485 1 G A - ReadM SNP 0014.scaffold00049 116495 1 A C - ReadM SNP 0014.scaffold00049 116642 1 A G - Both SNP 0014.scaffold00049 116684 1 T G scaffold2615 ReadM SNP 0014.scaffold00049 116736 1 G A - ReadM SNP 0014.scaffold00049 116746 1 A C - ReadM SNP 0014.scaffold00049 116804 1 T C - Both SNP 0014.scaffold00049 116826 1 T C scaffold2615 Both SNP 0014.scaffold00049 117042 1 G A scaffold2615 Both SNP 0014.scaffold00049 117069 1 C T scaffold2615 Both INDEL 0014.scaffold00049 117155 1 T . scaffold2615 Both SNP 0014.scaffold00049 117255 1 G T scaffold2615 Both INDEL 0014.scaffold00049 117319 1 . C scaffold2615 Both SNP 0014.scaffold00049 117328 1 C T scaffold2615 ReadM SNP 0014.scaffold00049 117369 1 G A - ReadM SNP 0014.scaffold00049 117382 1 T C - Both SNP 0014.scaffold00049 117482 1 C T scaffold2615 Both SNP 0014.scaffold00049 117502 1 T C scaffold2615 Both SNP 0014.scaffold00049 117509 1 C G scaffold2615 Both SNP 0014.scaffold00049 117706 1 T G scaffold2615 Both SNP 0014.scaffold00049 117906 1 A G scaffold2615 Both SNP 0014.scaffold00049 117989 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 118042 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 118043 3 ... CGG scaffold2615 Both SNP 0014.scaffold00049 118142 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 118216 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 118219 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 118288 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 118309 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 118311 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 118323 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 118331 1 A G scaffold2615 Both SNP 0014.scaffold00049 118339 1 T A scaffold2615 ReadM SNP 0014.scaffold00049 118544 1 C T - ReadM SNP 0014.scaffold00049 118586 1 C T - ReadM SNP 0014.scaffold00049 118642 1 G A - ReadM SNP 0014.scaffold00049 118763 1 T G - ReadM SNP 0014.scaffold00049 118843 1 G T - ReadM SNP 0014.scaffold00049 118975 1 A T - ReadM SNP 0014.scaffold00049 119212 1 T G - ReadM INDEL 0014.scaffold00049 119321 1 . T - ReadM SNP 0014.scaffold00049 119405 1 G A - ReadM SNP 0014.scaffold00049 119411 1 C T - ReadM SNP 0014.scaffold00049 119434 1 T C - ReadM SNP 0014.scaffold00049 119520 1 C T - ReadM SNP 0014.scaffold00049 119527 1 G T - ReadM SNP 0014.scaffold00049 119562 1 G T - ReadM SNP 0014.scaffold00049 119568 1 A G - ReadM SNP 0014.scaffold00049 119610 1 A G - ReadM SNP 0014.scaffold00049 119727 1 A T - ReadM SNP 0014.scaffold00049 119916 1 G A - ReadM SNP 0014.scaffold00049 119958 1 T C - ReadM SNP 0014.scaffold00049 120113 1 T A - ReadM SNP 0014.scaffold00049 120117 1 A T - Both SNP 0014.scaffold00049 120180 1 T A scaffold2615 Both SNP 0014.scaffold00049 120215 1 G A scaffold2615 Both SNP 0014.scaffold00049 120224 1 A G scaffold2615 Both SNP 0014.scaffold00049 120257 1 G A scaffold2615 ReadM SNP 0014.scaffold00049 120387 1 T C - ReadM SNP 0014.scaffold00049 120431 1 A G - ReadM SNP 0014.scaffold00049 120472 1 G A - ReadM SNP 0014.scaffold00049 120527 1 G T - ReadM SNP 0014.scaffold00049 120535 1 A C - ReadM SNP 0014.scaffold00049 120557 1 T A - ReadM SNP 0014.scaffold00049 120798 1 G A - ReadM SNP 0014.scaffold00049 120848 1 T C - ReadM SNP 0014.scaffold00049 120851 1 A T - ReadM SNP 0014.scaffold00049 120886 1 A G - ReadM SNP 0014.scaffold00049 120944 1 C A - ReadM INDEL 0014.scaffold00049 120996 1 . C - ReadM SNP 0014.scaffold00049 121091 1 T A - ReadM SNP 0014.scaffold00049 121095 1 G A - ReadM SNP 0014.scaffold00049 121131 1 G A - ReadM SNP 0014.scaffold00049 121193 1 A G - ReadM SNP 0014.scaffold00049 121244 1 T C - ReadM SNP 0014.scaffold00049 121316 1 T C - ReadM SNP 0014.scaffold00049 121339 1 C T - ReadM SNP 0014.scaffold00049 121420 1 T C - ReadM SNP 0014.scaffold00049 121581 1 C T - ReadM SNP 0014.scaffold00049 121769 1 A T - ReadM SNP 0014.scaffold00049 122014 1 T A - ReadM SNP 0014.scaffold00049 122071 1 T A - ReadM SNP 0014.scaffold00049 122112 1 T A - ReadM SNP 0014.scaffold00049 122222 1 A G - ReadM SNP 0014.scaffold00049 122272 1 C T - ReadM SNP 0014.scaffold00049 122303 1 T C - ReadM SNP 0014.scaffold00049 122338 1 T C - ReadM SNP 0014.scaffold00049 122411 1 G C - ReadM SNP 0014.scaffold00049 123592 1 T C - ReadM SNP 0014.scaffold00049 123598 1 T A - ScafM SNP 0014.scaffold00049 125403 1 G T scaffold2615 ScafM INDEL 0014.scaffold00049 125510 1 A . scaffold2615 ReadM SNP 0014.scaffold00049 125685 1 T A - ReadM SNP 0014.scaffold00049 125906 1 C A - ReadM INDEL 0014.scaffold00049 125918 1 T . - Both SNP 0014.scaffold00049 125999 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 126219 2 .. TT scaffold2615 ReadM SNP 0014.scaffold00049 126690 1 T C - Both SNP 0014.scaffold00049 126711 1 G C scaffold2615 Both INDEL 0014.scaffold00049 126737 1 G . scaffold2615 ScafM SNP 0014.scaffold00049 126899 1 C A scaffold2615 ReadM SNP 0014.scaffold00049 127124 1 C T - ScafM SNP 0014.scaffold00049 127511 1 C G scaffold2615 ScafM INDEL 0014.scaffold00049 127529 3 ... TTT scaffold2615 Both SNP 0014.scaffold00049 127587 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 127774 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 127873 4 TTTT AAAA scaffold2615 ScafM SNP 0014.scaffold00049 127881 1 C A scaffold2615 Both SNP 0014.scaffold00049 127955 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 127992 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 128013 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 128031 1 A T scaffold2615 ScafM INDEL 0014.scaffold00049 128058 2 AA .T scaffold2615 ScafM SNP 0014.scaffold00049 128065 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 128071 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 128139 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 128141 2 TT .. scaffold2615 ScafM SNP 0014.scaffold00049 128150 2 GT AC scaffold2615 ScafM SNP 0014.scaffold00049 128170 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 128183 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 128185 2 CT TC scaffold2615 ScafM SNP 0014.scaffold00049 128241 1 G A scaffold2615 Both SNP 0014.scaffold00049 128296 1 A G scaffold2615 ReadM SNP 0014.scaffold00049 128391 1 G A - ReadM SNP 0014.scaffold00049 128394 1 C A - ScafM SNP 0014.scaffold00049 128524 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 128528 1 . A scaffold2615 Both SNP 0014.scaffold00049 128868 1 T A scaffold2615 ScafM INDEL 0014.scaffold00049 128976 5 ..... TCTTG scaffold2615 ScafM INDEL 0014.scaffold00049 128979 2 .. AT scaffold2615 Both SNP 0014.scaffold00049 129028 1 C T scaffold2615 Both SNP 0014.scaffold00049 129051 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 129082 1 A G scaffold2615 Both SNP 0014.scaffold00049 129431 1 T A scaffold2615 Both SNP 0014.scaffold00049 129626 1 T G scaffold2615 Both SNP 0014.scaffold00049 129904 1 T C scaffold2615 Both SNP 0014.scaffold00049 130016 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 130064 1 A T scaffold2615 ScafM INDEL 0014.scaffold00049 130065 1 . T scaffold2615 ScafM SNP 0014.scaffold00049 130088 2 CA TT scaffold2615 Both SNP 0014.scaffold00049 130297 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 130315 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 130317 1 C T scaffold2615 Both SNP 0014.scaffold00049 130348 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 130854 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 130866 1 T G scaffold2615 Both SNP 0014.scaffold00049 131019 1 T C scaffold2615 Both SNP 0014.scaffold00049 131024 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 131237 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 131255 1 G C scaffold2615 ScafM INDEL 0014.scaffold00049 131260 11 GCTGAAATGTT ........... scaffold2615 ScafM INDEL 0014.scaffold00049 131272 2 CG .. scaffold2615 ScafM INDEL 0014.scaffold00049 131277 3 TCC ... scaffold2615 ScafM INDEL 0014.scaffold00049 131281 11 AGGATTGATGT ........... scaffold2615 ScafM SNP 0014.scaffold00049 131307 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 131327 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 131330 1 C G scaffold2615 Both SNP 0014.scaffold00049 131371 1 T A scaffold2615 Both SNP 0014.scaffold00049 131457 1 G C scaffold2615 Both SNP 0014.scaffold00049 131461 1 A G scaffold2615 Both INDEL 0014.scaffold00049 131468 1 . T scaffold2615 ScafM INDEL 0014.scaffold00049 131572 17 ................. GTTTGACCACAATCAAA scaffold2615 ScafM INDEL 0014.scaffold00049 131575 14 .............. CAAAAGTCAAAAGC scaffold2615 ScafM INDEL 0014.scaffold00049 131588 5 ..... CCAAA scaffold2615 ScafM INDEL 0014.scaffold00049 131589 2 .. GC scaffold2615 ScafM SNP 0014.scaffold00049 131602 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 131653 1 G A scaffold2615 Both SNP 0014.scaffold00049 131674 1 C T scaffold2615 Both SNP 0014.scaffold00049 131684 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 131806 1 C T scaffold2615 ScafM INDEL 0014.scaffold00049 131816 2 AA .T scaffold2615 ScafM INDEL 0014.scaffold00049 131821 1 . A scaffold2615 ScafM SNP 0014.scaffold00049 131826 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 131843 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 131866 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 131909 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 131998 1 G T scaffold2615 ScafM INDEL 0014.scaffold00049 132011 3 TCC ... scaffold2615 ScafM SNP 0014.scaffold00049 132023 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 132049 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 132053 1 T . scaffold2615 ScafM SNP 0014.scaffold00049 132082 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 132088 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 132097 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 132101 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 132121 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 132146 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 132186 13 ............. GATATGTAGAAGG scaffold2615 ScafM INDEL 0014.scaffold00049 132190 2 .G AA scaffold2615 ScafM INDEL 0014.scaffold00049 132195 2 .. CA scaffold2615 ScafM SNP 0014.scaffold00049 132196 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 132198 3 ... AAT scaffold2615 ScafM INDEL 0014.scaffold00049 132200 1 . T scaffold2615 ScafM INDEL 0014.scaffold00049 132201 1 . T scaffold2615 ScafM INDEL 0014.scaffold00049 132202 2 .. TA scaffold2615 ScafM SNP 0014.scaffold00049 132207 3 TCG GAA scaffold2615 ScafM SNP 0014.scaffold00049 132215 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 132270 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 132277 1 G C scaffold2615 ScafM INDEL 0014.scaffold00049 132292 4 .... GGAT scaffold2615 ScafM SNP 0014.scaffold00049 132303 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 132305 1 A G scaffold2615 ReadM SNP 0014.scaffold00049 133256 1 A C - ReadM SNP 0014.scaffold00049 133306 1 G A - ReadM SNP 0014.scaffold00049 133323 1 C T - ScafM SNP 0014.scaffold00049 133474 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 133516 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 133531 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 133562 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 133571 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 133580 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 133619 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 133649 2 AT GG scaffold2615 Both SNP 0014.scaffold00049 133754 1 G C scaffold2615 Both SNP 0014.scaffold00049 133782 1 T C scaffold2615 Both SNP 0014.scaffold00049 133887 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 133923 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 133931 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 133975 2 TT AC scaffold2615 Both SNP 0014.scaffold00049 133979 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 134061 1 C T scaffold2615 Both SNP 0014.scaffold00049 134080 1 G A scaffold2615 Both SNP 0014.scaffold00049 134107 1 C T scaffold2615 Both SNP 0014.scaffold00049 134157 1 C T scaffold2615 Both SNP 0014.scaffold00049 134178 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 134243 1 G A scaffold2615 Both SNP 0014.scaffold00049 134245 1 T C scaffold2615 Both SNP 0014.scaffold00049 134285 1 G A scaffold2615 Both SNP 0014.scaffold00049 134293 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 134375 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 134380 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 134397 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 134401 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 134414 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 134431 1 T G scaffold2615 Both SNP 0014.scaffold00049 134483 1 C T scaffold2615 Both SNP 0014.scaffold00049 134485 1 A G scaffold2615 Both SNP 0014.scaffold00049 134523 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 134554 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 134559 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 134572 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 134575 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 134586 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 134601 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 134616 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 134620 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 134680 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 134694 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 134700 1 G T scaffold2615 Both SNP 0014.scaffold00049 134711 1 A G scaffold2615 Both SNP 0014.scaffold00049 134796 2 GG AA scaffold2615 ScafM SNP 0014.scaffold00049 134820 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 134838 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 134875 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 134889 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 134895 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 134902 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 134936 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 134973 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 134986 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 135003 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 135027 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 135033 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 135099 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 135102 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135161 2 GA AG scaffold2615 Both SNP 0014.scaffold00049 135181 1 A C scaffold2615 Both SNP 0014.scaffold00049 135208 1 A G scaffold2615 Both SNP 0014.scaffold00049 135254 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 135300 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 135315 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 135318 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135329 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 135339 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135359 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135378 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 135382 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 135410 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 135429 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 135432 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 135452 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135479 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135512 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 135529 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 135541 7 TATTAAA ....... scaffold2615 ScafM INDEL 0014.scaffold00049 135555 3 ATC ... scaffold2615 ScafM SNP 0014.scaffold00049 135559 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135568 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135581 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135587 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 135604 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 135612 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 135666 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135669 1 A C scaffold2615 Both SNP 0014.scaffold00049 135720 1 T C scaffold2615 Both SNP 0014.scaffold00049 135734 1 C T scaffold2615 Both SNP 0014.scaffold00049 135784 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 135806 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 135813 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 135845 5 ..... TACGT scaffold2615 ScafM SNP 0014.scaffold00049 135862 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 135864 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 135874 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 135881 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135883 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 135899 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 135905 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 135950 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 135955 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135963 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 135971 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 136044 2 AT GC scaffold2615 Both SNP 0014.scaffold00049 136083 1 G A scaffold2615 Both SNP 0014.scaffold00049 136131 1 A G scaffold2615 Both SNP 0014.scaffold00049 136166 1 A G scaffold2615 Both SNP 0014.scaffold00049 136190 1 C T scaffold2615 Both SNP 0014.scaffold00049 136208 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 136259 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 136267 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 136289 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 136312 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 136354 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 136361 4 .... ACCG scaffold2615 ScafM INDEL 0014.scaffold00049 136365 10 .......... GAAAGCCTCC scaffold2615 ScafM INDEL 0014.scaffold00049 136367 2 .. TT scaffold2615 ScafM SNP 0014.scaffold00049 136372 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 136381 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136389 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 136399 1 G A scaffold2615 Both SNP 0014.scaffold00049 136436 1 A G scaffold2615 Both SNP 0014.scaffold00049 136447 1 C T scaffold2615 Both SNP 0014.scaffold00049 136477 1 C T scaffold2615 Both SNP 0014.scaffold00049 136541 1 G A scaffold2615 Both SNP 0014.scaffold00049 136599 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 136609 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 136635 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 136655 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 136687 2 TG CA scaffold2615 ScafM SNP 0014.scaffold00049 136694 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 136713 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 136724 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136731 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 136743 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 136757 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 136759 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136770 2 TT AC scaffold2615 ScafM SNP 0014.scaffold00049 136776 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 136785 1 C G scaffold2615 ScafM INDEL 0014.scaffold00049 136813 11 ........... TGTGTTTAGAT scaffold2615 ScafM SNP 0014.scaffold00049 136824 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 136840 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136883 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 136899 1 . C scaffold2615 ScafM SNP 0014.scaffold00049 136902 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136912 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 136914 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 136925 1 G A scaffold2615 Both SNP 0014.scaffold00049 136978 1 T G scaffold2615 Both SNP 0014.scaffold00049 136997 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 137053 2 AA .. scaffold2615 ScafM SNP 0014.scaffold00049 137063 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137082 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137085 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 137104 1 C A scaffold2615 Both SNP 0014.scaffold00049 137180 1 T A scaffold2615 Both SNP 0014.scaffold00049 137191 1 A T scaffold2615 Both SNP 0014.scaffold00049 137254 1 T A scaffold2615 Both SNP 0014.scaffold00049 137281 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137371 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137381 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137386 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 137390 1 T C scaffold2615 Both SNP 0014.scaffold00049 137452 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137498 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 137516 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 137538 1 G . scaffold2615 ScafM SNP 0014.scaffold00049 137541 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 137580 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137588 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 137592 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137598 1 T C scaffold2615 Both SNP 0014.scaffold00049 137626 1 G A scaffold2615 Both SNP 0014.scaffold00049 137649 1 A C scaffold2615 Both SNP 0014.scaffold00049 137709 1 C T scaffold2615 Both SNP 0014.scaffold00049 137754 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137771 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 137780 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 137808 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137828 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137863 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 137880 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137905 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 137951 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 137971 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 137981 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 137985 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 137998 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 138029 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 138051 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 138057 2 AA TG scaffold2615 ScafM SNP 0014.scaffold00049 138060 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138063 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 138109 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 138111 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138132 2 AC GT scaffold2615 ScafM SNP 0014.scaffold00049 138154 1 C T scaffold2615 Both SNP 0014.scaffold00049 138186 1 A G scaffold2615 Both SNP 0014.scaffold00049 138214 1 G A scaffold2615 Both SNP 0014.scaffold00049 138237 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 138281 1 G T scaffold2615 ScafM INDEL 0014.scaffold00049 138286 3 AGT ... scaffold2615 ScafM SNP 0014.scaffold00049 138335 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 138373 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 138383 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 138386 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 138430 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 138444 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 138448 1 A T scaffold2615 ScafM INDEL 0014.scaffold00049 138455 1 A . scaffold2615 ScafM SNP 0014.scaffold00049 138457 1 G C scaffold2615 ScafM INDEL 0014.scaffold00049 138459 3 GGC ... scaffold2615 ScafM SNP 0014.scaffold00049 138475 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138492 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 138506 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 138517 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 138528 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 138535 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138544 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138560 1 T C scaffold2615 Both SNP 0014.scaffold00049 138617 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 138691 2 AA TG scaffold2615 ScafM SNP 0014.scaffold00049 138725 2 AA TT scaffold2615 ScafM SNP 0014.scaffold00049 138730 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 138767 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 138773 2 GT CC scaffold2615 Both SNP 0014.scaffold00049 138806 1 G T scaffold2615 Both SNP 0014.scaffold00049 138864 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 138999 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139031 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139057 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139081 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139089 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139096 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139143 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139168 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 139174 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 139177 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 139216 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139262 2 AG CA scaffold2615 ScafM SNP 0014.scaffold00049 139276 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 139295 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139309 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139318 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 139320 1 A G scaffold2615 Both SNP 0014.scaffold00049 139362 1 G T scaffold2615 Both SNP 0014.scaffold00049 139392 1 T C scaffold2615 Both SNP 0014.scaffold00049 139446 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139462 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 139477 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139519 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 139528 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139537 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139553 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139587 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139613 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139622 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 139625 2 GG CA scaffold2615 ScafM SNP 0014.scaffold00049 139643 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139657 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139666 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139680 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139694 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139699 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139702 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139737 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139764 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 139778 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 139782 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 139794 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 139813 1 . A scaffold2615 ScafM SNP 0014.scaffold00049 139829 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 139848 2 TC GA scaffold2615 ScafM SNP 0014.scaffold00049 139853 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 139878 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 139896 1 A T scaffold2615 Both SNP 0014.scaffold00049 139909 1 G T scaffold2615 Both SNP 0014.scaffold00049 139912 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140034 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140073 2 AC TT scaffold2615 ScafM SNP 0014.scaffold00049 140090 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 140135 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140143 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 140150 1 C A scaffold2615 ScafM INDEL 0014.scaffold00049 140204 3 ... GAT scaffold2615 ScafM SNP 0014.scaffold00049 140213 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 140230 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140273 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 140312 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140340 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 140376 2 AT CA scaffold2615 ScafM SNP 0014.scaffold00049 140387 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 140401 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140405 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 140447 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140455 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140457 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140482 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140492 2 AA TT scaffold2615 ScafM SNP 0014.scaffold00049 140502 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140512 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140525 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140536 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140566 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 140575 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140599 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140606 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140614 2 AA TT scaffold2615 ScafM SNP 0014.scaffold00049 140626 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 140632 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 140662 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 140675 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140689 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140699 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140737 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 140748 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 140769 1 G T scaffold2615 Both SNP 0014.scaffold00049 140797 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 140823 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140874 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 140915 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140929 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140947 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 140965 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 140970 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140982 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 140987 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141019 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 141029 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 141052 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141097 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141106 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 141114 2 AT TA scaffold2615 ScafM SNP 0014.scaffold00049 141131 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 141196 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 141220 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 141223 1 T C scaffold2615 ScafM INDEL 0014.scaffold00049 141267 3 TAT ... scaffold2615 ScafM INDEL 0014.scaffold00049 141271 1 T . scaffold2615 ScafM SNP 0014.scaffold00049 141275 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 141291 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 141294 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 141321 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 141338 2 TG CA scaffold2615 ScafM SNP 0014.scaffold00049 141361 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141368 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 141393 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141405 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 141420 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 141427 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 141430 2 AC GT scaffold2615 ScafM SNP 0014.scaffold00049 141448 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 141465 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 141474 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 141500 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 141506 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141541 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 141548 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 141560 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 141614 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 141618 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 141651 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141666 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 141704 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 141721 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 141730 1 A . scaffold2615 Both SNP 0014.scaffold00049 141739 1 A G scaffold2615 Both SNP 0014.scaffold00049 141788 1 C T scaffold2615 Both SNP 0014.scaffold00049 141851 1 G A scaffold2615 Both SNP 0014.scaffold00049 141857 1 G T scaffold2615 Both SNP 0014.scaffold00049 141891 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 141951 3 CGA ... scaffold2615 ScafM SNP 0014.scaffold00049 141961 1 T G scaffold2615 ScafM SNP 0014.scaffold00049 141994 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 141997 1 G A scaffold2615 ScafM INDEL 0014.scaffold00049 142013 3 ... CTT scaffold2615 ScafM SNP 0014.scaffold00049 142100 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 142120 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142122 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142148 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 142170 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 142239 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142265 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 142270 1 C G scaffold2615 Both SNP 0014.scaffold00049 142294 1 C G scaffold2615 Both SNP 0014.scaffold00049 142312 1 T A scaffold2615 Both SNP 0014.scaffold00049 142345 1 A G scaffold2615 Both SNP 0014.scaffold00049 142401 1 C T scaffold2615 Both SNP 0014.scaffold00049 142424 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142496 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 142499 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142507 1 A G scaffold2615 ScafM SNP 0014.scaffold00049 142521 2 GA AT scaffold2615 ScafM SNP 0014.scaffold00049 142535 1 A C scaffold2615 ScafM SNP 0014.scaffold00049 142549 1 T C scaffold2615 ScafM SNP 0014.scaffold00049 142561 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 142569 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 142577 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 142590 1 T A scaffold2615 ScafM SNP 0014.scaffold00049 142603 2 TG AA scaffold2615 ScafM INDEL 0014.scaffold00049 142670 41 AATCTTTTTTGGTTTGATTGTATATAAGTAGTAGCTGTTAA ......................................... scaffold2615 ScafM INDEL 0014.scaffold00049 142712 4 TACA .... scaffold2615 ScafM SNP 0014.scaffold00049 142754 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142774 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 142815 1 G A scaffold2615 ScafM SNP 0014.scaffold00049 142824 1 C A scaffold2615 ScafM SNP 0014.scaffold00049 142842 1 A G scaffold2615 ScafM INDEL 0014.scaffold00049 142850 2 .. TT scaffold2615 ScafM SNP 0014.scaffold00049 142859 1 G C scaffold2615 ScafM SNP 0014.scaffold00049 142867 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 142926 1 C G scaffold2615 ScafM SNP 0014.scaffold00049 142979 1 G T scaffold2615 ScafM SNP 0014.scaffold00049 142995 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 142997 1 A T scaffold2615 ScafM SNP 0014.scaffold00049 143008 1 C T scaffold2615 ScafM SNP 0014.scaffold00049 143692 1 G A scaffold20369 ScafM INDEL 0014.scaffold00049 143694 2 .. GT scaffold20369 ScafM SNP 0014.scaffold00049 143698 1 A G scaffold20369 ScafM INDEL 0014.scaffold00049 143701 2 .. AC scaffold20369 ScafM SNP 0014.scaffold00049 143707 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 143714 2 GG TA scaffold20369 ScafM INDEL 0014.scaffold00049 143717 3 .AG GTT scaffold20369 ScafM SNP 0014.scaffold00049 143734 1 T C scaffold20369 ScafM SNP 0014.scaffold00049 143738 1 C A scaffold20369 ScafM INDEL 0014.scaffold00049 143741 2 .. AG scaffold20369 ScafM INDEL 0014.scaffold00049 143747 1 . T scaffold20369 ScafM SNP 0014.scaffold00049 143751 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 143754 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 143758 1 A G scaffold20369 ScafM SNP 0014.scaffold00049 143778 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 143784 1 C A scaffold20369 ScafM SNP 0014.scaffold00049 143814 1 A T scaffold20369 ScafM SNP 0014.scaffold00049 143822 1 A G scaffold20369 ScafM INDEL 0014.scaffold00049 143833 3 ... CAA scaffold20369 ScafM INDEL 0014.scaffold00049 143835 1 . T scaffold20369 ScafM SNP 0014.scaffold00049 143976 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 143983 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 143985 1 T A scaffold20369 ScafM SNP 0014.scaffold00049 143987 1 C G scaffold20369 ScafM SNP 0014.scaffold00049 143994 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 144002 1 C G scaffold20369 ScafM INDEL 0014.scaffold00049 144006 1 . C scaffold20369 ScafM SNP 0014.scaffold00049 144009 1 A T scaffold20369 ScafM INDEL 0014.scaffold00049 144012 1 C . scaffold20369 ScafM SNP 0014.scaffold00049 144016 2 CT TC scaffold20369 ScafM SNP 0014.scaffold00049 144023 1 C G scaffold20369 ScafM SNP 0014.scaffold00049 144045 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 144047 1 T C scaffold20369 ScafM SNP 0014.scaffold00049 144056 1 A T scaffold20369 ScafM SNP 0014.scaffold00049 144059 2 CC GA scaffold20369 ScafM SNP 0014.scaffold00049 144063 1 A G scaffold20369 ScafM SNP 0014.scaffold00049 144073 1 A G scaffold20369 ScafM SNP 0014.scaffold00049 144075 1 T A scaffold20369 ScafM SNP 0014.scaffold00049 144077 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 144097 1 C T scaffold20369 ScafM INDEL 0014.scaffold00049 144116 3 GAC ..T scaffold20369 ScafM SNP 0014.scaffold00049 144120 1 T G scaffold20369 ScafM INDEL 0014.scaffold00049 144123 1 C . scaffold20369 ScafM SNP 0014.scaffold00049 144126 1 C G scaffold20369 ScafM INDEL 0014.scaffold00049 144127 2 .C GA scaffold20369 ScafM INDEL 0014.scaffold00049 144130 1 . A scaffold20369 ScafM INDEL 0014.scaffold00049 144131 4 .AAA TTCC scaffold20369 ScafM SNP 0014.scaffold00049 144155 1 C A scaffold20369 ScafM SNP 0014.scaffold00049 144158 1 C A scaffold20369 ScafM SNP 0014.scaffold00049 144169 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 144171 2 TG CA scaffold20369 ScafM SNP 0014.scaffold00049 144177 2 TT CC scaffold20369 ScafM SNP 0014.scaffold00049 144183 1 T C scaffold20369 ScafM SNP 0014.scaffold00049 144188 1 A C scaffold20369 ScafM SNP 0014.scaffold00049 144196 1 C T scaffold20369 ScafM SNP 0014.scaffold00049 144201 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 144218 1 C T scaffold20369 ScafM SNP 0014.scaffold00049 144230 1 A T scaffold20369 ScafM SNP 0014.scaffold00049 144234 2 CA TC scaffold20369 ScafM SNP 0014.scaffold00049 144237 1 C T scaffold20369 ScafM SNP 0014.scaffold00049 144277 1 C T scaffold20369 ScafM INDEL 0014.scaffold00049 144300 2 .T GG scaffold20369 ScafM INDEL 0014.scaffold00049 144303 1 . G scaffold20369 ScafM INDEL 0014.scaffold00049 144306 2 TT .G scaffold20369 ScafM SNP 0014.scaffold00049 144311 2 GA CG scaffold20369 ScafM INDEL 0014.scaffold00049 144315 2 AG .C scaffold20369 ScafM SNP 0014.scaffold00049 144319 1 C G scaffold20369 ScafM SNP 0014.scaffold00049 144336 2 CA GT scaffold20369 ScafM SNP 0014.scaffold00049 144341 1 G A scaffold20369 ScafM SNP 0014.scaffold00049 144345 2 TG CC scaffold20369 ScafM SNP 0014.scaffold00049 144364 1 G T scaffold20369 ScafM SNP 0014.scaffold00049 144370 1 C G scaffold20369 ScafM SNP 0014.scaffold00049 144373 1 G A scaffold20369 ScafM SNP 0014.scaffold00049 144375 1 A G scaffold20369 ReadM SNP 0014.scaffold00049 148154 1 C T - ReadM SNP 0014.scaffold00049 148802 1 C T - ReadM SNP 0014.scaffold00049 148817 1 A T - ReadM SNP 0014.scaffold00049 148854 1 A G - ScafM SNP 0014.scaffold00049 153898 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 153915 3 ATA GCG scaffold10758 ScafM SNP 0014.scaffold00049 153929 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 153962 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 153967 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 153983 1 A T scaffold10758 ScafM INDEL 0014.scaffold00049 154017 4 CATG .... scaffold10758 ScafM INDEL 0014.scaffold00049 154026 1 . C scaffold10758 ScafM SNP 0014.scaffold00049 159428 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 159431 3 ... TTT scaffold10758 ScafM SNP 0014.scaffold00049 159443 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 159459 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 159466 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 159477 1 C T scaffold10758 ScafM INDEL 0014.scaffold00049 159491 4 .... GTAC scaffold10758 ScafM SNP 0014.scaffold00049 159549 1 A T scaffold10758 ScafM INDEL 0014.scaffold00049 159594 1 . T scaffold10758 ScafM SNP 0014.scaffold00049 159606 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 159612 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 159619 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 159621 2 GA AC scaffold10758 ScafM INDEL 0014.scaffold00049 159630 1 . T scaffold10758 ScafM SNP 0014.scaffold00049 159634 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 159645 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 159673 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 159686 1 C T scaffold10758 Both SNP 0014.scaffold00049 159703 1 C T scaffold10758 ReadM SNP 0014.scaffold00049 159780 1 A G - ScafM SNP 0014.scaffold00049 160812 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 160818 1 A C scaffold10758 ScafM SNP 0014.scaffold00049 160852 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 160893 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 160915 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 160918 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 160921 1 T G scaffold10758 ScafM INDEL 0014.scaffold00049 160934 2 TG .. scaffold10758 ScafM INDEL 0014.scaffold00049 160946 1 . C scaffold10758 ScafM SNP 0014.scaffold00049 160955 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 160962 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 160967 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 161177 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 161203 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 161211 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 161218 8 ........ CTCCCCCA scaffold10758 ScafM INDEL 0014.scaffold00049 161219 3 ... CCT scaffold10758 ScafM SNP 0014.scaffold00049 161244 1 T C scaffold10758 ScafM INDEL 0014.scaffold00049 161248 1 . G scaffold10758 ScafM SNP 0014.scaffold00049 161262 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 161274 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 161276 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 161294 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 161306 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 161309 3 CTA GCG scaffold10758 ScafM SNP 0014.scaffold00049 161321 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 161324 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 161352 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 161420 1 A C scaffold10758 ScafM SNP 0014.scaffold00049 161425 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 161427 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 161466 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 161476 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 161486 1 C T scaffold10758 ScafM INDEL 0014.scaffold00049 161563 1 . T scaffold10758 ScafM SNP 0014.scaffold00049 161598 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 161606 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 161612 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 161616 1 A . scaffold10758 ScafM SNP 0014.scaffold00049 161760 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 161953 2 CT GA scaffold10758 ScafM SNP 0014.scaffold00049 161969 1 A C scaffold10758 ScafM INDEL 0014.scaffold00049 161974 2 .. GT scaffold10758 ScafM INDEL 0014.scaffold00049 161976 1 . A scaffold10758 ScafM SNP 0014.scaffold00049 161995 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 162027 1 A G scaffold10758 ScafM INDEL 0014.scaffold00049 162050 1 . A scaffold10758 ScafM SNP 0014.scaffold00049 162057 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 162063 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 162204 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 162206 1 T A scaffold10758 ScafM INDEL 0014.scaffold00049 162212 4 GCGG .... scaffold10758 ScafM SNP 0014.scaffold00049 162217 2 CT TG scaffold10758 ScafM SNP 0014.scaffold00049 162239 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 162244 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 162251 1 C T scaffold10758 ScafM INDEL 0014.scaffold00049 162270 1 . A scaffold10758 ScafM SNP 0014.scaffold00049 162294 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 162303 1 T A scaffold10758 ScafM INDEL 0014.scaffold00049 162314 1 . A scaffold10758 ScafM SNP 0014.scaffold00049 162319 1 T G scaffold10758 ScafM INDEL 0014.scaffold00049 162326 1 . C scaffold10758 ScafM SNP 0014.scaffold00049 162328 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 162331 2 GC TT scaffold10758 ScafM SNP 0014.scaffold00049 162395 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 162398 4 GGAA ATTT scaffold10758 ScafM SNP 0014.scaffold00049 162403 3 GAA ATC scaffold10758 ScafM SNP 0014.scaffold00049 162408 1 C G scaffold10758 ScafM INDEL 0014.scaffold00049 162410 1 C . scaffold10758 ScafM SNP 0014.scaffold00049 162412 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 162421 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 162428 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 162431 8 ........ AAAAAAAA scaffold10758 ScafM SNP 0014.scaffold00049 162441 1 A C scaffold10758 ScafM SNP 0014.scaffold00049 162498 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 162555 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 162575 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 162634 1 G T scaffold10758 Both SNP 0014.scaffold00049 162676 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 162827 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 162836 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 163429 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 163440 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 163445 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 163455 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 163463 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 163470 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 163472 4 .... GGTA scaffold10758 ScafM SNP 0014.scaffold00049 163494 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 163502 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 163541 1 T A scaffold10758 ScafM INDEL 0014.scaffold00049 163543 2 TG .. scaffold10758 ScafM SNP 0014.scaffold00049 163573 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 163585 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 163602 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 163606 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 163643 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 163656 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 164005 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 164046 8 AGTATGAG ........ scaffold10758 ScafM SNP 0014.scaffold00049 164079 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 164098 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 164125 1 C T scaffold10758 ScafM INDEL 0014.scaffold00049 164146 1 . A scaffold10758 ScafM SNP 0014.scaffold00049 164193 1 T C scaffold10758 ReadM SNP 0014.scaffold00049 167359 1 A C - ReadM SNP 0014.scaffold00049 167425 1 G T - ReadM SNP 0014.scaffold00049 167681 1 A C - ReadM SNP 0014.scaffold00049 167728 1 T C - ReadM SNP 0014.scaffold00049 167736 1 A G - ReadM SNP 0014.scaffold00049 167840 1 T C - ReadM SNP 0014.scaffold00049 167865 1 T C - ReadM SNP 0014.scaffold00049 167900 1 T C - ReadM SNP 0014.scaffold00049 168004 1 A C - ReadM SNP 0014.scaffold00049 168048 1 A G - ReadM SNP 0014.scaffold00049 168097 1 A G - ScafM SNP 0014.scaffold00049 168824 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 168925 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 168942 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 168956 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 169286 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 169288 1 . C scaffold10758 ScafM SNP 0014.scaffold00049 169317 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 169373 57 GGAGGAGATCAGTTCCTTTTCGAGGGCTGTAGGACGGACGACCAATAGCTGAATCTA ......................................................... scaffold10758 ScafM SNP 0014.scaffold00049 169441 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 169495 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 169509 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 169539 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 169577 1 G C scaffold10758 ScafM SNP 0014.scaffold00049 169592 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 169711 1 G A scaffold10758 ScafM INDEL 0014.scaffold00049 169723 4 TTAA .... scaffold10758 ScafM SNP 0014.scaffold00049 174335 1 A T scaffold7910 ScafM SNP 0014.scaffold00049 174407 1 G T scaffold7910 ScafM SNP 0014.scaffold00049 174474 1 T C scaffold7910 ScafM SNP 0014.scaffold00049 184479 1 T C scaffold4432 ScafM SNP 0014.scaffold00049 184485 1 C G scaffold4432 ScafM SNP 0014.scaffold00049 184487 1 T G scaffold4432 ScafM SNP 0014.scaffold00049 184498 1 G A scaffold4432 ScafM SNP 0014.scaffold00049 184534 2 CT AC scaffold4432 ScafM SNP 0014.scaffold00049 184706 1 C T scaffold4432 ScafM SNP 0014.scaffold00049 184752 1 G A scaffold4432 ScafM SNP 0014.scaffold00049 184755 1 C A scaffold4432 ScafM SNP 0014.scaffold00049 184800 1 C T scaffold4432 ScafM SNP 0014.scaffold00049 184809 1 T C scaffold4432 ScafM SNP 0014.scaffold00049 184855 1 A G scaffold4432 ScafM SNP 0014.scaffold00049 184892 1 G A scaffold4432 ScafM SNP 0014.scaffold00049 186208 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 186291 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 186383 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 186439 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 186473 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 186482 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 186485 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 186509 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 186573 1 A C scaffold10758 ScafM SNP 0014.scaffold00049 186628 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 186633 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 186657 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 186660 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 186723 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 186726 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 186745 1 C A scaffold10758 ScafM SNP 0014.scaffold00049 186786 1 G T scaffold10758 ScafM SNP 0014.scaffold00049 186793 2 AG CA scaffold10758 ScafM SNP 0014.scaffold00049 186796 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 186819 1 T A scaffold10758 ScafM SNP 0014.scaffold00049 186824 1 T C scaffold10758 ScafM INDEL 0014.scaffold00049 186860 2 TG .. scaffold10758 ScafM SNP 0014.scaffold00049 186884 1 T C scaffold10758 ScafM SNP 0014.scaffold00049 186900 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 188089 1 A C scaffold10758 ScafM SNP 0014.scaffold00049 188095 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 188097 1 T C scaffold10758 ScafM INDEL 0014.scaffold00049 188099 1 G . scaffold10758 ScafM SNP 0014.scaffold00049 188131 1 C A scaffold10758 ScafM INDEL 0014.scaffold00049 188176 1 . T scaffold10758 ScafM SNP 0014.scaffold00049 188194 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 188199 1 A T scaffold10758 ScafM SNP 0014.scaffold00049 188216 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 188229 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 188261 1 C G scaffold10758 ScafM SNP 0014.scaffold00049 188295 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 188318 1 G A scaffold10758 ScafM SNP 0014.scaffold00049 188337 1 A G scaffold10758 ScafM SNP 0014.scaffold00049 188344 1 G T scaffold10758 ScafM INDEL 0014.scaffold00049 188379 2 .. AA scaffold10758 ScafM SNP 0014.scaffold00049 188394 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 188448 1 C T scaffold10758 ScafM SNP 0014.scaffold00049 188530 1 T G scaffold10758 ScafM SNP 0014.scaffold00049 189246 1 A T scaffold24943 ScafM INDEL 0014.scaffold00049 189254 2 .. AT scaffold24943 ScafM SNP 0014.scaffold00049 189261 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 189269 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 189275 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 189298 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 189326 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 189336 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 189340 1 C A scaffold24943 ScafM SNP 0014.scaffold00049 189508 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 189569 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 189579 1 G T scaffold24943 ScafM SNP 0014.scaffold00049 189594 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 189607 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 189656 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 189668 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 189712 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 189714 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 189722 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 189740 1 T C scaffold24943 ScafM INDEL 0014.scaffold00049 189771 1 . A scaffold24943 ScafM SNP 0014.scaffold00049 189787 1 G A scaffold24943 ScafM INDEL 0014.scaffold00049 189796 2 TA .. scaffold24943 ScafM SNP 0014.scaffold00049 189906 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 189908 1 C A scaffold24943 ScafM SNP 0014.scaffold00049 189933 1 G T scaffold24943 ScafM SNP 0014.scaffold00049 189936 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 189967 1 C G scaffold24943 ScafM SNP 0014.scaffold00049 189973 1 G A scaffold24943 ScafM INDEL 0014.scaffold00049 189978 3 AAG ... scaffold24943 ScafM SNP 0014.scaffold00049 189994 1 T C scaffold24943 ReadM INDEL 0014.scaffold00049 190101 1 A . - Both SNP 0014.scaffold00049 190134 1 C T scaffold24943 Both SNP 0014.scaffold00049 190192 1 C G scaffold24943 Both SNP 0014.scaffold00049 190215 1 T G scaffold24943 Both SNP 0014.scaffold00049 190227 1 T G scaffold24943 ReadM SNP 0014.scaffold00049 190322 1 A G - ReadM SNP 0014.scaffold00049 190327 1 C T - ReadM SNP 0014.scaffold00049 190352 1 G T - ScafM SNP 0014.scaffold00049 190420 1 A G scaffold24943 Both SNP 0014.scaffold00049 190430 1 T C scaffold24943 Both SNP 0014.scaffold00049 190499 1 A C scaffold24943 ScafM SNP 0014.scaffold00049 190540 1 A C scaffold24943 Both SNP 0014.scaffold00049 190555 1 A C scaffold24943 ReadM SNP 0014.scaffold00049 190614 1 G C - Both SNP 0014.scaffold00049 190766 1 T A scaffold24943 Both SNP 0014.scaffold00049 190798 1 C T scaffold24943 Both SNP 0014.scaffold00049 190880 1 T C scaffold24943 ReadM SNP 0014.scaffold00049 191094 1 G A - ReadM SNP 0014.scaffold00049 191115 1 C G - ReadM SNP 0014.scaffold00049 191122 1 C T - ReadM SNP 0014.scaffold00049 191441 1 C T - ScafM SNP 0014.scaffold00049 191488 1 T A scaffold24943 ScafM SNP 0014.scaffold00049 191493 1 T C scaffold24943 ScafM SNP 0014.scaffold00049 191500 1 A G scaffold24943 Both SNP 0014.scaffold00049 191526 1 C T scaffold24943 Both SNP 0014.scaffold00049 191595 1 C A scaffold24943 Both SNP 0014.scaffold00049 191611 1 A C scaffold24943 ScafM SNP 0014.scaffold00049 191694 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 191703 1 A C scaffold24943 ScafM INDEL 0014.scaffold00049 191715 11 ........... CAAATCTAACA scaffold24943 ScafM SNP 0014.scaffold00049 191745 2 GA TC scaffold24943 ScafM INDEL 0014.scaffold00049 191770 1 A . scaffold24943 ScafM SNP 0014.scaffold00049 191777 1 C T scaffold24943 ScafM INDEL 0014.scaffold00049 191789 13 CTAATAAAAAACC ............. scaffold24943 ScafM INDEL 0014.scaffold00049 191825 5 ..... AAGCA scaffold24943 ScafM INDEL 0014.scaffold00049 191827 2 .. CA scaffold24943 ScafM INDEL 0014.scaffold00049 191833 5 ..... CAATC scaffold24943 ScafM SNP 0014.scaffold00049 191849 1 T C scaffold24943 ScafM SNP 0014.scaffold00049 191853 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 191883 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 191896 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 191900 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 191918 2 CT TG scaffold24943 ScafM SNP 0014.scaffold00049 191946 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 191950 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 191958 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 191973 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 191984 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 192011 1 G C scaffold24943 ScafM SNP 0014.scaffold00049 192014 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 192032 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 192043 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 192045 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 192063 1 T A scaffold24943 ScafM SNP 0014.scaffold00049 192100 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 192106 1 T C scaffold24943 ScafM SNP 0014.scaffold00049 192124 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 192136 1 C A scaffold24943 ScafM SNP 0014.scaffold00049 192142 1 G A scaffold24943 ScafM SNP 0014.scaffold00049 192147 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 192167 1 A G scaffold24943 ScafM INDEL 0014.scaffold00049 192174 12 GATGAAAGTGTT ............ scaffold24943 ScafM SNP 0014.scaffold00049 192200 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 192247 1 T C scaffold24943 ScafM SNP 0014.scaffold00049 192270 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 192286 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 192294 1 C G scaffold24943 ScafM SNP 0014.scaffold00049 192343 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 192375 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 192377 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 192379 1 G C scaffold24943 ScafM SNP 0014.scaffold00049 192383 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 192400 1 C A scaffold24943 ScafM SNP 0014.scaffold00049 192404 1 T C scaffold24943 ScafM SNP 0014.scaffold00049 192425 1 A T scaffold24943 ScafM SNP 0014.scaffold00049 192454 1 A G scaffold24943 ScafM SNP 0014.scaffold00049 192465 1 T C scaffold24943 Both SNP 0014.scaffold00049 192476 1 C T scaffold24943 Both SNP 0014.scaffold00049 192538 1 C T scaffold24943 ScafM SNP 0014.scaffold00049 192870 1 A G scaffold24943 ScafM INDEL 0014.scaffold00049 192910 1 T . scaffold24943 ScafM SNP 0014.scaffold00049 192933 1 T G scaffold24943 ScafM SNP 0014.scaffold00049 192994 1 T C scaffold24943 ReadM SNP 0014.scaffold00049 195173 1 C T - ReadM SNP 0014.scaffold00049 195221 1 G T - ScafM SNP 0014.scaffold00049 195254 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 195281 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 195289 1 A G scaffold6394 ReadM SNP 0014.scaffold00049 195393 1 C T - ReadM SNP 0014.scaffold00049 195443 1 C T - ReadM SNP 0014.scaffold00049 195458 1 C T - ReadM SNP 0014.scaffold00049 195631 1 A G - ReadM SNP 0014.scaffold00049 195660 1 G T - ReadM SNP 0014.scaffold00049 195798 1 A G - ReadM SNP 0014.scaffold00049 195803 1 G T - ReadM SNP 0014.scaffold00049 195874 1 G C - ReadM SNP 0014.scaffold00049 195929 1 A G - ReadM SNP 0014.scaffold00049 195980 1 T C - ScafM SNP 0014.scaffold00049 196220 1 G A scaffold6394 ReadM SNP 0014.scaffold00049 211363 1 T C - ReadM SNP 0014.scaffold00049 211383 1 T A - ScafM SNP 0014.scaffold00049 213398 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 213430 2 GC TT scaffold6394 ScafM SNP 0014.scaffold00049 213448 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 213457 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 213464 1 T A scaffold6394 ScafM INDEL 0014.scaffold00049 213493 1 G . scaffold6394 ScafM SNP 0014.scaffold00049 213503 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 213521 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 213549 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 213554 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 213565 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 213597 1 A T scaffold6394 ScafM SNP 0014.scaffold00049 213604 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 213620 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 213643 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 213659 1 A T scaffold6394 ScafM SNP 0014.scaffold00049 213681 1 G A scaffold6394 ReadM SNP 0014.scaffold00049 214242 1 G A - Both SNP 0014.scaffold00049 214333 1 G A scaffold6394 Both SNP 0014.scaffold00049 214345 1 C T scaffold6394 Both SNP 0014.scaffold00049 214378 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 214388 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 214397 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 214399 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 214430 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 214463 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 214472 1 T C scaffold6394 ScafM INDEL 0014.scaffold00049 214482 1 T . scaffold6394 ScafM SNP 0014.scaffold00049 214525 2 GT TG scaffold6394 ScafM SNP 0014.scaffold00049 214593 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 214632 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 214644 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 214650 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 214664 1 G A scaffold6394 ReadM SNP 0014.scaffold00049 214779 1 T C - ReadM SNP 0014.scaffold00049 214809 1 T C - ScafM SNP 0014.scaffold00049 214997 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 215001 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 215035 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 215037 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 215054 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 215060 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 215097 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 215119 1 A T scaffold6394 ScafM SNP 0014.scaffold00049 215121 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 215143 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 215151 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 215155 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 215218 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 215222 1 G A scaffold6394 ScafM INDEL 0014.scaffold00049 215237 9 CTCCCCTCC ......... scaffold6394 ScafM SNP 0014.scaffold00049 215264 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 215280 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 215289 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 215331 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 215352 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 215372 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 215384 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 215407 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 215411 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 215414 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 215416 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 215428 2 GC TG scaffold6394 ScafM SNP 0014.scaffold00049 215444 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 215785 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 215833 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 215844 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 215877 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 215882 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 215894 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 215916 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 215927 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 215929 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 215957 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 215977 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 215983 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 215986 1 G A scaffold6394 ScafM INDEL 0014.scaffold00049 216017 2 .T AA scaffold6394 ScafM SNP 0014.scaffold00049 216025 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 216040 1 A T scaffold6394 ScafM SNP 0014.scaffold00049 216073 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 216075 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 216113 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 216116 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 216123 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 216125 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 216130 1 A T scaffold6394 Both SNP 0014.scaffold00049 216167 1 G A scaffold6394 Both SNP 0014.scaffold00049 216215 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 216293 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 216299 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 216340 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 216346 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 216408 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 216410 1 A T scaffold6394 ScafM SNP 0014.scaffold00049 216445 1 G T scaffold6394 ScafM INDEL 0014.scaffold00049 216473 1 G . scaffold6394 ScafM SNP 0014.scaffold00049 216480 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 216495 1 G A scaffold6394 ScafM INDEL 0014.scaffold00049 216502 1 . G scaffold6394 ScafM SNP 0014.scaffold00049 216515 1 G T scaffold6394 ScafM INDEL 0014.scaffold00049 216517 1 A . scaffold6394 ScafM INDEL 0014.scaffold00049 216543 1 A . scaffold6394 ScafM SNP 0014.scaffold00049 216559 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 216580 1 A G scaffold6394 Both SNP 0014.scaffold00049 216597 1 G C scaffold6394 Both INDEL 0014.scaffold00049 216611 1 A . scaffold6394 Both SNP 0014.scaffold00049 216635 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 216751 1 A G scaffold6394 ScafM INDEL 0014.scaffold00049 216757 2 .. GG scaffold6394 ScafM INDEL 0014.scaffold00049 216762 1 . G scaffold6394 ScafM INDEL 0014.scaffold00049 216763 1 . G scaffold6394 ScafM SNP 0014.scaffold00049 216767 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 216784 1 A G scaffold6394 ScafM INDEL 0014.scaffold00049 216801 41 ......................................... CTGGAGACAGAGAGAGTTTGAGGGTTGTTCGTCGTTATTGT scaffold6394 ScafM INDEL 0014.scaffold00049 216803 13 ............. GCTGGAGAGAGAG scaffold6394 ScafM SNP 0014.scaffold00049 216841 1 T C scaffold6394 ScafM INDEL 0014.scaffold00049 216856 1 . A scaffold6394 ScafM INDEL 0014.scaffold00049 216881 1 A . scaffold6394 ScafM SNP 0014.scaffold00049 216902 1 G A scaffold6394 ScafM INDEL 0014.scaffold00049 216931 6 GAGAGA ...... scaffold6394 ScafM SNP 0014.scaffold00049 216940 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 216959 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 216978 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 216986 1 G A scaffold6394 ReadM SNP 0014.scaffold00049 217108 1 C T - ReadM INDEL 0014.scaffold00049 217124 1 A . - ScafM SNP 0014.scaffold00049 217373 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 217380 2 AA CT scaffold6394 ScafM SNP 0014.scaffold00049 217390 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 217394 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 217420 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 217424 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 217429 1 C A scaffold6394 ScafM INDEL 0014.scaffold00049 217452 1 A . scaffold6394 ScafM SNP 0014.scaffold00049 217457 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 217486 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 217524 1 A T scaffold6394 ScafM INDEL 0014.scaffold00049 217577 2 CT .A scaffold6394 ScafM SNP 0014.scaffold00049 217592 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 217611 1 G T scaffold6394 ScafM SNP 0014.scaffold00049 217616 1 A T scaffold6394 ScafM INDEL 0014.scaffold00049 217653 1 . T scaffold6394 ScafM INDEL 0014.scaffold00049 217655 5 ..... TTACG scaffold6394 ScafM SNP 0014.scaffold00049 218441 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 218444 1 T A scaffold6394 ScafM SNP 0014.scaffold00049 218454 1 G C scaffold6394 ScafM SNP 0014.scaffold00049 218464 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 218472 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 218474 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 218490 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 218497 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 218505 1 C T scaffold6394 ScafM SNP 0014.scaffold00049 218541 3 TCA ATG scaffold6394 ScafM SNP 0014.scaffold00049 218565 1 T G scaffold6394 ScafM INDEL 0014.scaffold00049 218966 1 . C scaffold6394 ScafM SNP 0014.scaffold00049 218974 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 219171 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 219207 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 219222 3 TAT CGA scaffold6394 Both SNP 0014.scaffold00049 219296 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 219368 2 CA GT scaffold6394 ScafM INDEL 0014.scaffold00049 219409 2 .. TG scaffold6394 ScafM INDEL 0014.scaffold00049 219414 4 .... CACA scaffold6394 ScafM INDEL 0014.scaffold00049 219415 2 .. CA scaffold6394 ScafM INDEL 0014.scaffold00049 219416 3 ... TGT scaffold6394 ScafM INDEL 0014.scaffold00049 219419 6 ...... GATTAC scaffold6394 ScafM INDEL 0014.scaffold00049 219423 18 .................. ATTTTCAACACTTCCATA scaffold6394 ScafM INDEL 0014.scaffold00049 219427 2 .G AC scaffold6394 ScafM SNP 0014.scaffold00049 219430 2 GG CA scaffold6394 ScafM INDEL 0014.scaffold00049 219432 1 . T scaffold6394 ScafM INDEL 0014.scaffold00049 219434 2 .. CC scaffold6394 ScafM SNP 0014.scaffold00049 219436 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 219444 1 T C scaffold6394 Both SNP 0014.scaffold00049 219453 1 C T scaffold6394 ReadM INDEL 0014.scaffold00049 219551 1 G . - ReadM SNP 0014.scaffold00049 219634 1 T C - ReadM SNP 0014.scaffold00049 219791 1 A T - ReadM SNP 0014.scaffold00049 219797 1 A G - ReadM SNP 0014.scaffold00049 219830 1 C G - ReadM SNP 0014.scaffold00049 219889 1 G A - ReadM SNP 0014.scaffold00049 219896 1 T C - ReadM SNP 0014.scaffold00049 220053 1 T G - ReadM SNP 0014.scaffold00049 220070 1 C A - ReadM SNP 0014.scaffold00049 220082 1 T C - ScafM SNP 0014.scaffold00049 220412 1 T G scaffold6394 ScafM SNP 0014.scaffold00049 220419 1 A T scaffold6394 ScafM INDEL 0014.scaffold00049 220450 1 C . scaffold6394 ScafM SNP 0014.scaffold00049 220454 1 C T scaffold6394 ScafM INDEL 0014.scaffold00049 220459 1 A . scaffold6394 ScafM INDEL 0014.scaffold00049 220467 1 . G scaffold6394 ScafM SNP 0014.scaffold00049 220473 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 220489 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 220528 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 220547 2 AC CT scaffold6394 ScafM INDEL 0014.scaffold00049 220553 2 CC .. scaffold6394 ScafM SNP 0014.scaffold00049 220564 2 CT GC scaffold6394 ScafM SNP 0014.scaffold00049 220578 1 C A scaffold6394 ScafM INDEL 0014.scaffold00049 220579 1 . A scaffold6394 ScafM SNP 0014.scaffold00049 220606 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 220610 1 G A scaffold6394 ReadM SNP 0014.scaffold00049 220712 1 C T - ReadM SNP 0014.scaffold00049 220748 1 A T - ReadM SNP 0014.scaffold00049 220809 1 A C - ScafM SNP 0014.scaffold00049 221068 2 AA CC scaffold6394 ScafM SNP 0014.scaffold00049 221115 1 C G scaffold6394 ScafM SNP 0014.scaffold00049 221132 1 C A scaffold6394 ScafM SNP 0014.scaffold00049 221142 1 A G scaffold6394 ScafM SNP 0014.scaffold00049 221146 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 221154 1 G A scaffold6394 ScafM SNP 0014.scaffold00049 221164 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 221191 1 T C scaffold6394 ScafM INDEL 0014.scaffold00049 221194 1 A . scaffold6394 ScafM SNP 0014.scaffold00049 221204 1 C T scaffold6394 ScafM INDEL 0014.scaffold00049 221327 1 T . scaffold6394 ScafM SNP 0014.scaffold00049 221332 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 221374 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 221384 2 CC TG scaffold6394 ScafM SNP 0014.scaffold00049 221399 1 T C scaffold6394 ScafM SNP 0014.scaffold00049 221704 3 TGG CAA scaffold6394 ScafM SNP 0014.scaffold00049 221726 1 A C scaffold6394 ScafM INDEL 0014.scaffold00049 221756 3 ACG ... scaffold6394 ScafM SNP 0014.scaffold00049 221805 1 A C scaffold6394 ScafM SNP 0014.scaffold00049 223195 1 G A scaffold43970 ScafM SNP 0014.scaffold00049 223203 1 T G scaffold43970 ScafM SNP 0014.scaffold00049 223231 1 A G scaffold43970 ScafM SNP 0014.scaffold00049 223238 1 A G scaffold43970 ScafM SNP 0014.scaffold00049 223248 1 T C scaffold43970 ScafM SNP 0014.scaffold00049 223250 2 GC AA scaffold43970 ScafM SNP 0014.scaffold00049 223253 1 A G scaffold43970 ScafM SNP 0014.scaffold00049 223310 1 T C scaffold43970 Both SNP 0014.scaffold00049 223363 1 T A scaffold43970 Both SNP 0014.scaffold00049 223422 1 T C scaffold43970 ScafM SNP 0014.scaffold00049 223459 1 C T scaffold43970 ScafM SNP 0014.scaffold00049 223470 1 G A scaffold43970 ScafM SNP 0014.scaffold00049 223508 1 T G scaffold43970 ScafM SNP 0014.scaffold00049 223517 1 A C scaffold43970 ScafM SNP 0014.scaffold00049 223525 1 C T scaffold43970 ScafM SNP 0014.scaffold00049 223538 1 A C scaffold43970 ReadM SNP 0014.scaffold00049 224086 1 T G - ReadM SNP 0014.scaffold00049 224421 1 G A - ReadM SNP 0014.scaffold00049 224604 1 G C - ScafM SNP 0014.scaffold00049 226604 1 C G scaffold302 ScafM SNP 0014.scaffold00049 226650 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 226659 1 . C scaffold302 ScafM SNP 0014.scaffold00049 226712 1 A C scaffold302 ScafM SNP 0014.scaffold00049 226722 2 CA GG scaffold302 ScafM SNP 0014.scaffold00049 226739 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 226748 1 A . scaffold302 ScafM SNP 0014.scaffold00049 226768 1 T G scaffold302 ScafM SNP 0014.scaffold00049 226770 1 C T scaffold302 ScafM SNP 0014.scaffold00049 226780 1 G A scaffold302 ScafM SNP 0014.scaffold00049 226803 1 G T scaffold302 ScafM SNP 0014.scaffold00049 226813 1 C A scaffold302 ScafM SNP 0014.scaffold00049 226815 1 A G scaffold302 ScafM SNP 0014.scaffold00049 226844 1 T A scaffold302 ScafM SNP 0014.scaffold00049 226848 1 C G scaffold302 ScafM SNP 0014.scaffold00049 226874 1 A C scaffold302 ScafM SNP 0014.scaffold00049 226882 2 GG CT scaffold302 ScafM INDEL 0014.scaffold00049 226898 1 A . scaffold302 ScafM SNP 0014.scaffold00049 226903 1 G C scaffold302 ScafM SNP 0014.scaffold00049 226922 1 A G scaffold302 ScafM SNP 0014.scaffold00049 226924 1 C A scaffold302 Both SNP 0014.scaffold00049 226958 1 A T scaffold302 Both SNP 0014.scaffold00049 226991 1 C A scaffold302 ScafM INDEL 0014.scaffold00049 227020 3 ... TTT scaffold302 ScafM SNP 0014.scaffold00049 227048 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227056 1 T A scaffold302 ScafM SNP 0014.scaffold00049 227107 1 C T scaffold302 ScafM SNP 0014.scaffold00049 227111 1 C A scaffold302 ScafM SNP 0014.scaffold00049 227123 1 C G scaffold302 ScafM SNP 0014.scaffold00049 227127 1 A T scaffold302 ScafM SNP 0014.scaffold00049 227143 1 A G scaffold302 ScafM SNP 0014.scaffold00049 227147 1 T A scaffold302 Both SNP 0014.scaffold00049 227213 1 G C scaffold302 ScafM SNP 0014.scaffold00049 227256 1 T G scaffold302 ScafM SNP 0014.scaffold00049 227258 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227260 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227266 1 C A scaffold302 ScafM SNP 0014.scaffold00049 227300 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227304 1 T C scaffold302 ScafM INDEL 0014.scaffold00049 227307 1 T . scaffold302 ScafM INDEL 0014.scaffold00049 227309 1 C . scaffold302 ScafM SNP 0014.scaffold00049 227313 1 A G scaffold302 ScafM SNP 0014.scaffold00049 227326 1 A G scaffold302 Both INDEL 0014.scaffold00049 227354 1 C . scaffold302 Both SNP 0014.scaffold00049 227374 1 T C scaffold302 Both SNP 0014.scaffold00049 227426 1 C T scaffold302 ScafM SNP 0014.scaffold00049 227466 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227494 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227530 1 T A scaffold302 ScafM SNP 0014.scaffold00049 227569 1 T A scaffold302 ScafM SNP 0014.scaffold00049 227603 1 A C scaffold302 ScafM SNP 0014.scaffold00049 227640 1 A G scaffold302 ScafM SNP 0014.scaffold00049 227752 1 C G scaffold302 ScafM SNP 0014.scaffold00049 227756 1 C G scaffold302 ScafM SNP 0014.scaffold00049 227765 1 G A scaffold302 ScafM SNP 0014.scaffold00049 227782 1 C A scaffold302 Both SNP 0014.scaffold00049 227842 1 T A scaffold302 ScafM SNP 0014.scaffold00049 227920 1 A T scaffold302 ScafM SNP 0014.scaffold00049 227938 1 G T scaffold302 ScafM SNP 0014.scaffold00049 227943 1 T C scaffold302 ScafM SNP 0014.scaffold00049 227959 2 AT GG scaffold302 ScafM SNP 0014.scaffold00049 227962 1 A G scaffold302 ScafM SNP 0014.scaffold00049 227993 1 T G scaffold302 ScafM SNP 0014.scaffold00049 227996 1 C G scaffold302 ScafM SNP 0014.scaffold00049 228007 1 A G scaffold302 ScafM SNP 0014.scaffold00049 228013 1 T A scaffold302 ScafM SNP 0014.scaffold00049 228023 1 C T scaffold302 ScafM SNP 0014.scaffold00049 228033 1 G C scaffold302 ScafM SNP 0014.scaffold00049 228037 2 GG CA scaffold302 ScafM SNP 0014.scaffold00049 228055 1 A G scaffold302 ScafM SNP 0014.scaffold00049 228086 1 C G scaffold302 ScafM SNP 0014.scaffold00049 228106 1 T C scaffold302 ScafM SNP 0014.scaffold00049 228113 1 C T scaffold302 ScafM SNP 0014.scaffold00049 228117 1 A T scaffold302 ScafM SNP 0014.scaffold00049 228122 1 A C scaffold302 ScafM INDEL 0014.scaffold00049 228161 2 TG .C scaffold302 ScafM INDEL 0014.scaffold00049 228165 2 TT .. scaffold302 ScafM INDEL 0014.scaffold00049 228170 7 TTGGCGC ....... scaffold302 ScafM SNP 0014.scaffold00049 228178 1 T G scaffold302 ScafM SNP 0014.scaffold00049 228181 1 G C scaffold302 ScafM SNP 0014.scaffold00049 228226 1 C A scaffold302 ScafM SNP 0014.scaffold00049 228247 1 A C scaffold302 ScafM SNP 0014.scaffold00049 228261 1 C T scaffold302 ScafM SNP 0014.scaffold00049 228265 1 G A scaffold302 ScafM SNP 0014.scaffold00049 228282 1 C T scaffold302 ScafM SNP 0014.scaffold00049 228305 1 A T scaffold302 ScafM SNP 0014.scaffold00049 228326 1 A T scaffold302 ScafM SNP 0014.scaffold00049 228370 1 C T scaffold302 ScafM INDEL 0014.scaffold00049 228377 13 TGTTGTGGTTCTA ............. scaffold302 ReadM SNP 0014.scaffold00049 228782 1 G A - ReadM SNP 0014.scaffold00049 228788 1 G T - ScafM SNP 0014.scaffold00049 228967 1 G A scaffold302 ScafM SNP 0014.scaffold00049 229012 1 A G scaffold302 ScafM SNP 0014.scaffold00049 229022 1 C G scaffold302 ScafM SNP 0014.scaffold00049 229028 1 G T scaffold302 ScafM SNP 0014.scaffold00049 229033 1 G T scaffold302 ScafM INDEL 0014.scaffold00049 229143 3 CCG ... scaffold302 ScafM SNP 0014.scaffold00049 229159 2 TT CG scaffold302 ScafM SNP 0014.scaffold00049 229199 1 G A scaffold302 ScafM SNP 0014.scaffold00049 229226 1 C T scaffold302 ScafM SNP 0014.scaffold00049 229237 1 T G scaffold302 ScafM SNP 0014.scaffold00049 229277 1 T C scaffold302 ScafM SNP 0014.scaffold00049 229409 1 T G scaffold302 ScafM SNP 0014.scaffold00049 229411 1 C T scaffold302 ScafM SNP 0014.scaffold00049 229428 1 T C scaffold302 ScafM SNP 0014.scaffold00049 229550 2 AA GG scaffold302 ScafM SNP 0014.scaffold00049 229558 1 G A scaffold302 ScafM SNP 0014.scaffold00049 229584 1 A T scaffold302 ScafM SNP 0014.scaffold00049 229600 2 TG AC scaffold302 ScafM SNP 0014.scaffold00049 229612 2 TG CA scaffold302 ScafM SNP 0014.scaffold00049 229641 1 C G scaffold302 ScafM SNP 0014.scaffold00049 229648 1 G A scaffold302 ScafM SNP 0014.scaffold00049 229687 1 T C scaffold302 ScafM SNP 0014.scaffold00049 229735 1 T C scaffold302 ScafM SNP 0014.scaffold00049 229759 1 T G scaffold302 Both SNP 0014.scaffold00049 229777 1 C G scaffold302 Both SNP 0014.scaffold00049 229796 1 G A scaffold302 Both SNP 0014.scaffold00049 229858 1 C T scaffold302 ScafM SNP 0014.scaffold00049 229881 1 T G scaffold302 ScafM SNP 0014.scaffold00049 229884 1 G T scaffold302 ScafM INDEL 0014.scaffold00049 229892 1 T . scaffold302 ScafM SNP 0014.scaffold00049 229906 1 C A scaffold302 ScafM INDEL 0014.scaffold00049 229917 48 ................................................ TTCTGAATCTATGTAAGAAAATTGTTATTTTTGCATGAATCTATGAGA scaffold302 Both SNP 0014.scaffold00049 229985 1 T C scaffold302 ReadM SNP 0014.scaffold00049 230012 1 C T - ReadM SNP 0014.scaffold00049 230199 1 A G - ReadM SNP 0014.scaffold00049 230224 1 G A - ReadM SNP 0014.scaffold00049 230285 1 T C - ReadM SNP 0014.scaffold00049 230308 1 A C - Both SNP 0014.scaffold00049 230347 1 G A scaffold302 Both SNP 0014.scaffold00049 230390 1 G T scaffold302 ScafM SNP 0014.scaffold00049 230431 1 C T scaffold302 ScafM SNP 0014.scaffold00049 230437 1 T G scaffold302 ScafM SNP 0014.scaffold00049 230439 1 T G scaffold302 ScafM SNP 0014.scaffold00049 230452 1 T G scaffold302 ScafM INDEL 0014.scaffold00049 230495 5 TTTTT .AAAA scaffold302 ScafM SNP 0014.scaffold00049 230510 1 T C scaffold302 ScafM SNP 0014.scaffold00049 230536 1 G A scaffold302 ReadM SNP 0014.scaffold00049 230623 1 G A - ReadM SNP 0014.scaffold00049 230631 1 T C - ReadM SNP 0014.scaffold00049 230671 1 C G - ReadM INDEL 0014.scaffold00049 230740 1 G . - ReadM SNP 0014.scaffold00049 230746 1 A T - ScafM SNP 0014.scaffold00049 230763 1 T A scaffold302 ScafM SNP 0014.scaffold00049 230791 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 230795 5 ..... GCTTG scaffold302 ScafM SNP 0014.scaffold00049 230797 1 A C scaffold302 Both SNP 0014.scaffold00049 230831 1 T C scaffold302 ReadM INDEL 0014.scaffold00049 230917 1 T . - ReadM SNP 0014.scaffold00049 230927 1 T C - ReadM SNP 0014.scaffold00049 230939 1 T C - ReadM SNP 0014.scaffold00049 231013 1 A G - ReadM SNP 0014.scaffold00049 231024 1 G A - ScafM SNP 0014.scaffold00049 231240 1 G A scaffold302 ScafM SNP 0014.scaffold00049 231261 2 AT TC scaffold302 ScafM SNP 0014.scaffold00049 231270 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 231279 5 ..... AAATT scaffold302 ScafM SNP 0014.scaffold00049 231314 1 G A scaffold302 ScafM SNP 0014.scaffold00049 231328 1 A G scaffold302 ScafM SNP 0014.scaffold00049 231337 1 T C scaffold302 ScafM SNP 0014.scaffold00049 231377 1 C T scaffold302 ScafM SNP 0014.scaffold00049 231385 1 A G scaffold302 ScafM SNP 0014.scaffold00049 231387 1 C A scaffold302 ScafM SNP 0014.scaffold00049 231420 1 T C scaffold302 ScafM SNP 0014.scaffold00049 231432 1 C T scaffold302 ScafM SNP 0014.scaffold00049 231472 1 G C scaffold302 ScafM SNP 0014.scaffold00049 231488 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 231528 1 . A scaffold302 ScafM SNP 0014.scaffold00049 231621 2 TT AC scaffold302 ScafM SNP 0014.scaffold00049 231642 1 A T scaffold302 ScafM SNP 0014.scaffold00049 231648 2 CC GT scaffold302 ScafM INDEL 0014.scaffold00049 231655 2 AA .. scaffold302 ScafM SNP 0014.scaffold00049 231670 1 T C scaffold302 ScafM SNP 0014.scaffold00049 231688 1 C T scaffold302 ScafM INDEL 0014.scaffold00049 231710 1 . C scaffold302 ScafM SNP 0014.scaffold00049 231712 1 T A scaffold302 ScafM SNP 0014.scaffold00049 231726 1 T C scaffold302 ScafM INDEL 0014.scaffold00049 231743 1 . G scaffold302 ScafM SNP 0014.scaffold00049 231815 1 A T scaffold302 ScafM INDEL 0014.scaffold00049 231830 1 A . scaffold302 ScafM INDEL 0014.scaffold00049 231857 1 . G scaffold302 ScafM SNP 0014.scaffold00049 231882 1 T C scaffold302 ScafM SNP 0014.scaffold00049 231884 1 A C scaffold302 ScafM INDEL 0014.scaffold00049 231935 7 ....... CATTTCT scaffold302 ScafM SNP 0014.scaffold00049 231948 1 G T scaffold302 ScafM INDEL 0014.scaffold00049 231957 3 ... TTC scaffold302 ScafM SNP 0014.scaffold00049 231969 1 T C scaffold302 ScafM SNP 0014.scaffold00049 232006 1 A C scaffold302 ScafM SNP 0014.scaffold00049 232019 1 G C scaffold302 ScafM SNP 0014.scaffold00049 232041 1 C G scaffold302 ScafM SNP 0014.scaffold00049 232234 1 G A scaffold302 ScafM SNP 0014.scaffold00049 232262 1 C T scaffold302 ScafM INDEL 0014.scaffold00049 232294 2 .G CA scaffold302 ScafM SNP 0014.scaffold00049 232310 1 G T scaffold302 ScafM SNP 0014.scaffold00049 232315 1 A G scaffold302 ScafM SNP 0014.scaffold00049 232341 1 A G scaffold302 ScafM SNP 0014.scaffold00049 232353 1 T A scaffold302 ScafM INDEL 0014.scaffold00049 232355 1 . G scaffold302 ScafM SNP 0014.scaffold00049 232388 2 GG AT scaffold302 ScafM SNP 0014.scaffold00049 232430 2 TG AT scaffold302 ScafM SNP 0014.scaffold00049 232437 1 G A scaffold302 ScafM SNP 0014.scaffold00049 232442 1 A C scaffold302 ScafM INDEL 0014.scaffold00049 232455 1 . G scaffold302 ScafM SNP 0014.scaffold00049 232490 1 A C scaffold302 ScafM SNP 0014.scaffold00049 232494 1 T A scaffold302 ScafM SNP 0014.scaffold00049 232504 1 A G scaffold302 ScafM SNP 0014.scaffold00049 232562 1 G A scaffold302 ScafM SNP 0014.scaffold00049 232571 1 C T scaffold302 ScafM SNP 0014.scaffold00049 232577 1 C T scaffold302 ScafM SNP 0014.scaffold00049 232600 2 CG TT scaffold302 ScafM SNP 0014.scaffold00049 232634 1 A G scaffold302 ScafM SNP 0014.scaffold00049 232650 1 A T scaffold302 ScafM SNP 0014.scaffold00049 232669 1 A C scaffold302 ScafM SNP 0014.scaffold00049 232677 2 AA GG scaffold302 ScafM SNP 0014.scaffold00049 232690 1 A T scaffold302 Both SNP 0014.scaffold00049 232727 1 A T scaffold302 ScafM SNP 0014.scaffold00049 232809 1 C A scaffold302 ScafM SNP 0014.scaffold00049 232814 1 A G scaffold302 ScafM SNP 0014.scaffold00049 232870 1 A T scaffold302 ScafM SNP 0014.scaffold00049 232920 1 C G scaffold302 ScafM SNP 0014.scaffold00049 232930 1 A T scaffold302 ScafM SNP 0014.scaffold00049 232975 1 G A scaffold302 ScafM SNP 0014.scaffold00049 232995 1 T G scaffold302 ScafM SNP 0014.scaffold00049 233049 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 233053 4 ..AC TTTT scaffold302 Both INDEL 0014.scaffold00049 233088 1 . T scaffold302 Both SNP 0014.scaffold00049 233121 1 T C scaffold302 Both SNP 0014.scaffold00049 233139 1 A C scaffold302 ScafM SNP 0014.scaffold00049 233179 1 T C scaffold302 ScafM SNP 0014.scaffold00049 233198 1 A G scaffold302 ScafM SNP 0014.scaffold00049 233208 1 T C scaffold302 ScafM SNP 0014.scaffold00049 233246 1 C T scaffold302 ScafM SNP 0014.scaffold00049 233257 1 T A scaffold302 ScafM SNP 0014.scaffold00049 233263 1 T A scaffold302 ScafM SNP 0014.scaffold00049 233281 1 C G scaffold302 ScafM SNP 0014.scaffold00049 233286 1 A G scaffold302 ScafM SNP 0014.scaffold00049 233301 2 AC GT scaffold302 ScafM SNP 0014.scaffold00049 233313 1 T C scaffold302 ScafM SNP 0014.scaffold00049 233344 2 TA CT scaffold302 ScafM INDEL 0014.scaffold00049 233355 2 CT .. scaffold302 ScafM INDEL 0014.scaffold00049 233358 1 C . scaffold302 ScafM SNP 0014.scaffold00049 233367 1 A G scaffold302 ScafM INDEL 0014.scaffold00049 233411 16 GAAGCTTTTAGGATTG ................ scaffold302 ScafM SNP 0014.scaffold00049 233486 1 A G scaffold302 ScafM SNP 0014.scaffold00049 233509 1 G C scaffold302 ScafM SNP 0014.scaffold00049 233524 1 T C scaffold302 ScafM SNP 0014.scaffold00049 233528 1 G C scaffold302 ScafM SNP 0014.scaffold00049 233535 1 A G scaffold302 ScafM SNP 0014.scaffold00049 233569 1 G A scaffold302 ScafM SNP 0014.scaffold00049 233572 1 G A scaffold302 ScafM SNP 0014.scaffold00049 233587 1 C T scaffold302 ScafM SNP 0014.scaffold00049 233592 1 G A scaffold302 ScafM SNP 0014.scaffold00049 233652 1 A T scaffold302 ScafM SNP 0014.scaffold00049 233691 1 C T scaffold302 ScafM SNP 0014.scaffold00049 233700 1 C T scaffold302 ScafM SNP 0014.scaffold00049 233725 1 G A scaffold302 ReadM SNP 0014.scaffold00049 233840 1 T G - ReadM SNP 0014.scaffold00049 233858 1 A G - ScafM SNP 0014.scaffold00049 233894 1 T A scaffold302 ScafM SNP 0014.scaffold00049 233950 1 G A scaffold302 ScafM SNP 0014.scaffold00049 233952 1 G T scaffold302 ScafM SNP 0014.scaffold00049 233957 1 T A scaffold302 ScafM SNP 0014.scaffold00049 233967 1 G C scaffold302 ScafM SNP 0014.scaffold00049 233984 1 A T scaffold302 ScafM SNP 0014.scaffold00049 234081 1 T A scaffold302 ScafM SNP 0014.scaffold00049 234088 1 G T scaffold302 ScafM SNP 0014.scaffold00049 234090 1 C T scaffold302 ScafM SNP 0014.scaffold00049 234114 1 G T scaffold302 ReadM SNP 0014.scaffold00049 234401 1 T C - ScafM SNP 0015.scaffold00050 113 1 G T scaffold14027 ScafM SNP 0015.scaffold00050 141 1 T C scaffold14027 ScafM INDEL 0015.scaffold00050 188 1 . A scaffold14027 ScafM SNP 0015.scaffold00050 243 1 T G scaffold14027 ScafM SNP 0015.scaffold00050 8636 2 TA AT scaffold10809 Both INDEL 0015.scaffold00050 52739 1 A . scaffold10809 ReadM SNP 0015.scaffold00050 91016 1 T A - ReadM INDEL 0015.scaffold00050 149410 1 . A - ScafM SNP 0015.scaffold00050 157217 1 C T scaffold32372 ScafM INDEL 0015.scaffold00050 233634 2 .. AA scaffold7811 ScafM SNP 0015.scaffold00050 234358 1 C A scaffold7811 ScafM INDEL 0015.scaffold00050 237493 2 .. TT scaffold7811 ScafM INDEL 0015.scaffold00050 240667 3 AAA ... scaffold7811 ReadM SNP 0015.scaffold00050 247421 1 T A - ScafM INDEL 0015.scaffold00050 253723 1 T . scaffold7811 ScafM SNP 0015.scaffold00050 262334 1 A G scaffold7811 ScafM INDEL 0015.scaffold00050 268303 11 ........... CCCCCCCCCCC scaffold7811 ScafM SNP 0015.scaffold00050 306089 1 T C scaffold11153 ScafM INDEL 0015.scaffold00050 306091 1 A . scaffold11153 ScafM SNP 0015.scaffold00050 306107 1 T C scaffold11153 ReadM SNP 0015.scaffold00050 357613 1 T C - ScafM INDEL 0015.scaffold00050 357938 2 .A TT scaffold22159 ScafM SNP 0015.scaffold00050 357975 1 G A scaffold22159 ScafM INDEL 0015.scaffold00050 358040 1 T . scaffold22159 ScafM SNP 0015.scaffold00050 358042 1 T A scaffold22159 ScafM SNP 0015.scaffold00050 358049 1 T C scaffold22159 ScafM SNP 0015.scaffold00050 358061 1 C A scaffold22159 ScafM INDEL 0015.scaffold00050 358073 5 ..... GTAAT scaffold22159 ScafM SNP 0015.scaffold00050 360455 1 A G scaffold39 ScafM SNP 0015.scaffold00050 360460 1 G A scaffold39 ScafM SNP 0015.scaffold00050 360625 1 T A scaffold39 ScafM SNP 0015.scaffold00050 360643 1 A C scaffold39 ScafM SNP 0015.scaffold00050 360653 1 C T scaffold39 ScafM SNP 0015.scaffold00050 360655 1 T C scaffold39 ScafM INDEL 0015.scaffold00050 360756 5 ATTAA ..... scaffold39 ScafM SNP 0015.scaffold00050 360836 1 T G scaffold39 ScafM SNP 0015.scaffold00050 360853 1 T C scaffold39 ScafM SNP 0015.scaffold00050 360856 1 A C scaffold39 ScafM SNP 0015.scaffold00050 360940 1 A T scaffold39 ScafM SNP 0015.scaffold00050 361086 1 T G scaffold7253 ScafM SNP 0015.scaffold00050 361132 1 A G scaffold7253 ScafM SNP 0015.scaffold00050 361137 1 G A scaffold7253 ScafM SNP 0015.scaffold00050 361139 1 C G scaffold7253 ScafM SNP 0015.scaffold00050 361229 1 T G scaffold7253 ScafM SNP 0015.scaffold00050 361236 2 TG AA scaffold7253 ScafM SNP 0015.scaffold00050 361250 1 T A scaffold7253 ScafM SNP 0015.scaffold00050 361314 1 C T scaffold7253 ScafM SNP 0015.scaffold00050 361344 1 A G scaffold7253 ScafM SNP 0015.scaffold00050 363247 1 T A scaffold15149 ScafM SNP 0015.scaffold00050 363410 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 363536 1 T C scaffold15149 ScafM SNP 0015.scaffold00050 363551 1 G A scaffold15149 ScafM SNP 0015.scaffold00050 363575 1 A G scaffold15149 ScafM SNP 0015.scaffold00050 363609 1 T G scaffold15149 ScafM SNP 0015.scaffold00050 363622 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 363668 1 A G scaffold15149 ScafM SNP 0015.scaffold00050 363747 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 363758 1 G A scaffold15149 ScafM SNP 0015.scaffold00050 363788 1 C G scaffold15149 ScafM SNP 0015.scaffold00050 363798 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 363854 1 A T scaffold15149 ScafM SNP 0015.scaffold00050 363889 1 T C scaffold15149 ScafM SNP 0015.scaffold00050 363903 2 TG AA scaffold15149 ScafM SNP 0015.scaffold00050 363911 1 G A scaffold15149 ScafM SNP 0015.scaffold00050 363948 1 T C scaffold15149 ScafM SNP 0015.scaffold00050 363965 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 363979 1 G A scaffold15149 ScafM SNP 0015.scaffold00050 364032 1 A T scaffold15149 ScafM SNP 0015.scaffold00050 364050 1 T C scaffold15149 ScafM INDEL 0015.scaffold00050 364058 1 . G scaffold15149 ScafM INDEL 0015.scaffold00050 364059 2 .. CG scaffold15149 ScafM SNP 0015.scaffold00050 364081 1 T A scaffold15149 ScafM SNP 0015.scaffold00050 364096 1 A G scaffold15149 ScafM INDEL 0015.scaffold00050 364130 1 G . scaffold15149 ScafM SNP 0015.scaffold00050 364152 1 G T scaffold15149 ScafM INDEL 0015.scaffold00050 364153 4 .... TTTT scaffold15149 ScafM SNP 0015.scaffold00050 364167 1 A G scaffold15149 ScafM SNP 0015.scaffold00050 364190 1 G T scaffold15149 ScafM SNP 0015.scaffold00050 364206 1 G C scaffold15149 ScafM INDEL 0015.scaffold00050 364217 1 C . scaffold15149 ScafM INDEL 0015.scaffold00050 364220 1 C . scaffold15149 ScafM INDEL 0015.scaffold00050 364231 1 . T scaffold15149 ScafM SNP 0015.scaffold00050 364319 1 G C scaffold15149 ScafM SNP 0015.scaffold00050 364329 1 A T scaffold15149 ScafM SNP 0015.scaffold00050 364354 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 364382 1 A T scaffold15149 ScafM INDEL 0015.scaffold00050 364429 1 T . scaffold15149 ScafM SNP 0015.scaffold00050 364462 1 T C scaffold15149 ScafM SNP 0015.scaffold00050 364468 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 364483 1 C T scaffold15149 ScafM SNP 0015.scaffold00050 364544 1 C T scaffold15149 ScafM SNP 0016.scaffold00051 8 1 A T scaffold10935 ScafM SNP 0016.scaffold00051 7433 1 T A scaffold38525 ScafM SNP 0016.scaffold00051 7454 1 G C scaffold38525 ScafM SNP 0016.scaffold00051 7458 1 C T scaffold38525 ScafM SNP 0016.scaffold00051 7507 1 A G scaffold38525 ScafM INDEL 0016.scaffold00051 7645 2 TG .. scaffold38525 ScafM SNP 0016.scaffold00051 45674 1 A G scaffold608 ScafM INDEL 0016.scaffold00051 45686 1 . T scaffold608 ScafM SNP 0016.scaffold00051 48459 1 T C scaffold1545 ScafM SNP 0016.scaffold00051 48464 1 C A scaffold1545 ScafM SNP 0016.scaffold00051 48472 1 G T scaffold1545 ScafM SNP 0016.scaffold00051 48478 1 A C scaffold1545 ScafM SNP 0016.scaffold00051 48482 1 A T scaffold1545 ScafM SNP 0016.scaffold00051 48498 1 C A scaffold1545 ScafM SNP 0016.scaffold00051 48533 1 T C scaffold1545 ScafM SNP 0016.scaffold00051 48551 1 A G scaffold1545 ScafM SNP 0016.scaffold00051 48571 3 ATA TGG scaffold1545 ScafM SNP 0016.scaffold00051 48627 1 A T scaffold1545 ScafM SNP 0016.scaffold00051 48638 1 T C scaffold1545 ScafM INDEL 0016.scaffold00051 48647 1 T . scaffold1545 ScafM SNP 0016.scaffold00051 48649 1 A G scaffold1545 ScafM SNP 0016.scaffold00051 48651 1 A G scaffold1545 ScafM SNP 0016.scaffold00051 48665 1 T C scaffold1545 ScafM SNP 0016.scaffold00051 48695 2 AT TA scaffold1545 ScafM SNP 0016.scaffold00051 48700 1 A T scaffold1545 ScafM SNP 0016.scaffold00051 48711 1 C T scaffold1545 ScafM SNP 0016.scaffold00051 48719 1 T C scaffold1545 ScafM SNP 0016.scaffold00051 48737 1 C T scaffold1545 ScafM SNP 0016.scaffold00051 48784 1 G A scaffold1545 ScafM SNP 0016.scaffold00051 48834 2 GA CG scaffold1545 ScafM SNP 0016.scaffold00051 48843 1 A T scaffold1545 ScafM SNP 0016.scaffold00051 48847 1 T G scaffold1545 ScafM SNP 0016.scaffold00051 48889 1 A T scaffold1545 ScafM SNP 0016.scaffold00051 48935 1 C T scaffold1545 ScafM INDEL 0016.scaffold00051 48942 38 ...................................... AATATACAAAGTATCATCTTCTAATGGATCCGAGATGT scaffold1545 ScafM SNP 0016.scaffold00051 49040 1 T G scaffold1545 ScafM SNP 0016.scaffold00051 49088 1 G C scaffold1545 ScafM SNP 0016.scaffold00051 49098 1 G C scaffold1545 ScafM SNP 0016.scaffold00051 49106 1 G A scaffold1545 ScafM SNP 0016.scaffold00051 49112 1 C T scaffold1545 ScafM SNP 0016.scaffold00051 49126 1 G A scaffold1545 ScafM SNP 0016.scaffold00051 49140 1 A G scaffold1545 ScafM SNP 0016.scaffold00051 52163 1 G A scaffold22747 ScafM SNP 0016.scaffold00051 58442 1 C T scaffold37010 ScafM SNP 0016.scaffold00051 58447 2 AT GC scaffold37010 ScafM SNP 0016.scaffold00051 58450 1 A G scaffold37010 ScafM SNP 0016.scaffold00051 58475 1 C T scaffold37010 ScafM SNP 0016.scaffold00051 58499 1 A T scaffold37010 ScafM SNP 0016.scaffold00051 58504 1 C G scaffold37010 ScafM INDEL 0016.scaffold00051 58530 4 .... AATT scaffold37010 ScafM SNP 0016.scaffold00051 58566 1 G T scaffold37010 ScafM INDEL 0016.scaffold00051 82273 1 . G scaffold4133 ScafM INDEL 0016.scaffold00051 95094 10 .......... CCCCCCCCCC scaffold4133 ScafM INDEL 0016.scaffold00051 151235 1 . A scaffold16793 ScafM SNP 0016.scaffold00051 158106 1 C T scaffold16793 ScafM INDEL 0016.scaffold00051 170096 1 . A scaffold16793 ScafM SNP 0016.scaffold00051 190302 1 T C scaffold4453 ScafM SNP 0016.scaffold00051 190502 1 A G scaffold4453 ScafM SNP 0016.scaffold00051 190505 1 A G scaffold4453 ScafM SNP 0016.scaffold00051 190585 1 G C scaffold4453 ScafM SNP 0016.scaffold00051 190645 1 C A scaffold4453 ScafM SNP 0016.scaffold00051 190758 1 A G scaffold4453 ScafM SNP 0016.scaffold00051 190795 1 T C scaffold4453 ScafM INDEL 0016.scaffold00051 190804 2 .. TA scaffold4453 ScafM SNP 0016.scaffold00051 190878 1 T C scaffold4453 ScafM SNP 0016.scaffold00051 191199 1 G C scaffold4453 ReadM INDEL 0016.scaffold00051 261617 1 . T - ScafM SNP 0016.scaffold00051 284494 1 C T scaffold22267 ScafM SNP 0016.scaffold00051 284497 1 G A scaffold22267 ScafM SNP 0016.scaffold00051 284531 1 G A scaffold22267 ScafM SNP 0016.scaffold00051 284543 1 C A scaffold22267 ScafM SNP 0016.scaffold00051 284612 1 G T scaffold22267 ScafM SNP 0016.scaffold00051 284615 1 G A scaffold22267 ScafM SNP 0016.scaffold00051 284626 1 T C scaffold22267 ScafM SNP 0016.scaffold00051 284661 1 C T scaffold22267 ScafM SNP 0016.scaffold00051 284673 1 G A scaffold22267 ScafM SNP 0016.scaffold00051 284677 1 C G scaffold22267 ScafM SNP 0016.scaffold00051 284681 1 T A scaffold22267 ScafM SNP 0016.scaffold00051 284719 1 T C scaffold22267 Both INDEL 0016.scaffold00051 325574 1 . T scaffold493 ScafM SNP 0016.scaffold00051 334050 1 G A scaffold9277 ScafM SNP 0016.scaffold00051 334073 1 T C scaffold9277 ScafM SNP 0016.scaffold00051 334076 1 C T scaffold9277 ScafM SNP 0016.scaffold00051 334101 1 A G scaffold9277 ScafM SNP 0016.scaffold00051 334132 1 A G scaffold9277 ScafM SNP 0016.scaffold00051 334155 1 T C scaffold9277 ScafM SNP 0016.scaffold00051 334180 1 C A scaffold9277 ScafM SNP 0016.scaffold00051 334197 1 G A scaffold9277 ScafM SNP 0016.scaffold00051 334203 1 A T scaffold9277 ScafM SNP 0016.scaffold00051 334223 1 T G scaffold9277 ScafM SNP 0016.scaffold00051 334234 1 G T scaffold9277 ScafM SNP 0016.scaffold00051 334240 1 A G scaffold9277 ScafM INDEL 0016.scaffold00051 334248 15 CGTCACTGTCCACGC ............... scaffold9277 ScafM SNP 0016.scaffold00051 334274 1 A T scaffold9277 ScafM SNP 0016.scaffold00051 334284 1 A T scaffold9277 ScafM SNP 0016.scaffold00051 334323 1 T G scaffold9277 ScafM SNP 0016.scaffold00051 337147 1 C T scaffold493 ScafM SNP 0016.scaffold00051 343176 1 G A scaffold493 ScafM SNP 0016.scaffold00051 343178 1 A G scaffold493 ScafM INDEL 0016.scaffold00051 405423 4 .... TTTG scaffold493 ScafM INDEL 0016.scaffold00051 435709 1 . A scaffold493 ScafM SNP 0016.scaffold00051 438748 1 T A scaffold493 ScafM SNP 0016.scaffold00051 444781 1 G T scaffold493 ScafM SNP 0016.scaffold00051 461394 1 A G scaffold657 ScafM INDEL 0016.scaffold00051 461465 17 ................. ACACTGCTAGTATGTAC scaffold657 ScafM SNP 0016.scaffold00051 461484 1 G T scaffold657 ScafM SNP 0016.scaffold00051 461494 2 CG TA scaffold657 ScafM INDEL 0016.scaffold00051 482905 1 T . scaffold493 ScafM SNP 0016.scaffold00051 486925 1 T A scaffold9258 ScafM SNP 0016.scaffold00051 486932 1 G A scaffold9258 ScafM SNP 0016.scaffold00051 487033 1 A G scaffold9258 ScafM SNP 0017.scaffold00052 38 1 T A scaffold26281 ScafM INDEL 0017.scaffold00052 39 2 .. GT scaffold26281 ScafM SNP 0017.scaffold00052 2757 1 A G scaffold26281 ScafM INDEL 0017.scaffold00052 2819 1 T . scaffold26281 ScafM SNP 0017.scaffold00052 3310 1 A G scaffold26281 ScafM INDEL 0017.scaffold00052 3379 1 . A scaffold26281 ScafM SNP 0017.scaffold00052 3409 1 G A scaffold26281 ScafM INDEL 0017.scaffold00052 8390 1 . A scaffold5525 ScafM INDEL 0017.scaffold00052 13473 1 . A scaffold5525 ScafM INDEL 0017.scaffold00052 44678 57 ......................................................... AAAAAAAAAAAGAAAAAGTAGTACCTGTTCAACTACTGGATTTAGTTTTAAGAACAA scaffold45507 ScafM INDEL 0017.scaffold00052 92330 1 . T scaffold2865 ScafM SNP 0017.scaffold00052 101257 1 T C scaffold2865 ScafM SNP 0017.scaffold00052 101772 1 G A scaffold2865 ReadM INDEL 0017.scaffold00052 101811 1 G . - Both INDEL 0017.scaffold00052 101813 1 T . scaffold2865 ScafM SNP 0017.scaffold00052 101941 1 G T scaffold2865 ScafM SNP 0017.scaffold00052 101959 1 T C scaffold2865 ScafM INDEL 0017.scaffold00052 102152 1 . C scaffold2865 ScafM SNP 0017.scaffold00052 102209 1 A T scaffold2865 ScafM SNP 0017.scaffold00052 102386 1 T C scaffold2865 ScafM SNP 0017.scaffold00052 102393 1 G A scaffold2865 ScafM SNP 0017.scaffold00052 102460 1 A G scaffold2865 ScafM INDEL 0017.scaffold00052 102600 4 GTCG .... scaffold2865 ScafM SNP 0017.scaffold00052 102991 1 G T scaffold2865 ScafM SNP 0017.scaffold00052 103124 1 T C scaffold2865 ScafM INDEL 0017.scaffold00052 116552 1 . T scaffold2865 ScafM INDEL 0017.scaffold00052 123986 1 . A scaffold2865 ScafM SNP 0017.scaffold00052 129901 1 C A scaffold2865 ReadM INDEL 0017.scaffold00052 157336 1 . G - ScafM SNP 0017.scaffold00052 188133 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 188154 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 188169 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 188195 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 188206 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 188214 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 188246 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 188267 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 188311 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 188347 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 188423 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 188456 2 TG CA scaffold9953 ScafM INDEL 0017.scaffold00052 188468 1 . C scaffold9953 ScafM SNP 0017.scaffold00052 188480 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 188495 1 T G scaffold9953 ScafM SNP 0017.scaffold00052 188498 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 188554 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 188603 1 T G scaffold9953 ScafM SNP 0017.scaffold00052 188612 1 T G scaffold9953 ScafM SNP 0017.scaffold00052 188618 1 T A scaffold9953 ScafM SNP 0017.scaffold00052 188656 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 188660 1 T C scaffold9953 ScafM INDEL 0017.scaffold00052 188662 1 A . scaffold9953 ScafM INDEL 0017.scaffold00052 188688 1 . T scaffold9953 ScafM SNP 0017.scaffold00052 188820 1 C G scaffold9953 ScafM INDEL 0017.scaffold00052 188834 3 GCC .TT scaffold9953 ScafM SNP 0017.scaffold00052 188963 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 188989 1 G T scaffold9953 ScafM INDEL 0017.scaffold00052 189015 1 . A scaffold9953 ScafM SNP 0017.scaffold00052 189065 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 189069 1 T A scaffold9953 ScafM SNP 0017.scaffold00052 189082 2 AT GG scaffold9953 ScafM SNP 0017.scaffold00052 189113 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 189154 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 189171 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 189185 1 T A scaffold9953 ScafM SNP 0017.scaffold00052 189193 1 T G scaffold9953 ScafM SNP 0017.scaffold00052 189222 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 189280 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 189299 1 G T scaffold9953 ScafM SNP 0017.scaffold00052 189320 2 CG AC scaffold9953 ScafM SNP 0017.scaffold00052 189408 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 189418 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 189436 1 T A scaffold9953 ScafM SNP 0017.scaffold00052 189449 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 189472 1 G T scaffold9953 ScafM SNP 0017.scaffold00052 189522 1 A C scaffold9953 ScafM SNP 0017.scaffold00052 189573 1 G T scaffold9953 ScafM SNP 0017.scaffold00052 189575 1 T G scaffold9953 ScafM SNP 0017.scaffold00052 189679 1 C A scaffold9953 ScafM INDEL 0017.scaffold00052 189681 1 A . scaffold9953 ScafM SNP 0017.scaffold00052 189755 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 189806 1 G T scaffold9953 ScafM SNP 0017.scaffold00052 189829 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 189855 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 189929 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 190068 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 190099 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 190173 1 C A scaffold9953 ScafM SNP 0017.scaffold00052 190182 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 190293 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 190488 1 C A scaffold9953 ScafM SNP 0017.scaffold00052 190586 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 190618 2 AC GA scaffold9953 ScafM SNP 0017.scaffold00052 190627 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 190685 1 G C scaffold9953 ScafM SNP 0017.scaffold00052 190718 1 A T scaffold9953 ScafM SNP 0017.scaffold00052 190733 1 G A scaffold9953 ScafM SNP 0017.scaffold00052 190755 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 190768 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 190784 1 T C scaffold9953 ScafM SNP 0017.scaffold00052 190787 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 190837 1 C T scaffold9953 ScafM SNP 0017.scaffold00052 190845 1 A G scaffold9953 ScafM SNP 0017.scaffold00052 190929 2 AT CA scaffold9953 ScafM INDEL 0017.scaffold00052 204991 11 ........... TCAATTCATGA scaffold14453 ScafM INDEL 0017.scaffold00052 228194 1 . A scaffold14453 ScafM SNP 0017.scaffold00052 236915 1 T C scaffold14453 ScafM SNP 0017.scaffold00052 236917 2 AG CA scaffold14453 ScafM INDEL 0017.scaffold00052 236921 5 CGAAA ...TT scaffold14453 ScafM SNP 0017.scaffold00052 236928 1 G A scaffold14453 ScafM INDEL 0017.scaffold00052 236931 1 T . scaffold14453 ScafM SNP 0017.scaffold00052 236934 3 GTT CAA scaffold14453 ScafM INDEL 0017.scaffold00052 236939 1 A . scaffold14453 ScafM SNP 0017.scaffold00052 236941 1 T A scaffold14453 ScafM SNP 0017.scaffold00052 236944 2 TA GC scaffold14453 ScafM INDEL 0017.scaffold00052 236947 2 AT .. scaffold14453 ScafM INDEL 0017.scaffold00052 236952 2 .C AA scaffold14453 ScafM SNP 0017.scaffold00052 236957 1 A T scaffold14453 ScafM SNP 0017.scaffold00052 236960 1 C A scaffold14453 ScafM SNP 0017.scaffold00052 236962 1 A T scaffold14453 ScafM INDEL 0017.scaffold00052 236964 3 GCT ... scaffold14453 ScafM SNP 0017.scaffold00052 236968 1 T A scaffold14453 ScafM SNP 0017.scaffold00052 236970 1 T A scaffold14453 ScafM INDEL 0017.scaffold00052 236972 2 TA .. scaffold14453 ScafM SNP 0017.scaffold00052 236977 1 T C scaffold14453 ScafM INDEL 0017.scaffold00052 236980 1 G . scaffold14453 ScafM SNP 0017.scaffold00052 236982 2 AT CC scaffold14453 ScafM SNP 0017.scaffold00052 236985 2 AT GA scaffold14453 ScafM SNP 0017.scaffold00052 236992 1 T G scaffold14453 ScafM INDEL 0017.scaffold00052 236995 6 GTTATT ...... scaffold14453 ScafM INDEL 0017.scaffold00052 237002 3 AAG ... scaffold14453 ScafM SNP 0017.scaffold00052 238660 1 G T scaffold14453 ReadM INDEL 0017.scaffold00052 239251 1 A . - Both INDEL 0017.scaffold00052 239255 1 T . scaffold14453 ScafM SNP 0017.scaffold00052 239280 1 G A scaffold14453 ReadM SNP 0017.scaffold00052 305523 1 C A - ScafM SNP 0017.scaffold00052 307681 1 A G scaffold3297 ScafM SNP 0017.scaffold00052 307737 1 A G scaffold3297 ScafM INDEL 0017.scaffold00052 339908 3 ... ACC scaffold18847 ScafM SNP 0017.scaffold00052 339909 1 T A scaffold18847 ScafM INDEL 0017.scaffold00052 340384 1 T . scaffold16031 ScafM SNP 0017.scaffold00052 340389 1 T A scaffold16031 ScafM SNP 0017.scaffold00052 340391 1 G T scaffold16031 ScafM INDEL 0017.scaffold00052 340403 13 ............. GTCCTCCTTTAAT scaffold16031 ScafM SNP 0017.scaffold00052 340419 1 G A scaffold16031 ScafM SNP 0017.scaffold00052 340423 1 A T scaffold16031 ScafM SNP 0017.scaffold00052 340425 1 A C scaffold16031 ScafM SNP 0017.scaffold00052 340427 1 C T scaffold16031 ScafM SNP 0017.scaffold00052 340443 1 A G scaffold16031 ScafM SNP 0017.scaffold00052 340448 1 G A scaffold16031 ScafM SNP 0017.scaffold00052 340475 1 T C scaffold16031 ScafM INDEL 0017.scaffold00052 340481 1 T . scaffold16031 ScafM SNP 0017.scaffold00052 340487 1 G A scaffold16031 ScafM INDEL 0017.scaffold00052 340499 7 ....... TGTTTAC scaffold16031 ScafM SNP 0017.scaffold00052 340527 1 G T scaffold16031 ScafM INDEL 0017.scaffold00052 340540 5 TGTGT ..... scaffold16031 ScafM SNP 0017.scaffold00052 340546 1 T A scaffold16031 ScafM SNP 0017.scaffold00052 340576 1 A G scaffold16031 ScafM SNP 0017.scaffold00052 340616 1 G A scaffold16031 ScafM SNP 0017.scaffold00052 340631 1 T C scaffold16031 ScafM SNP 0017.scaffold00052 340637 1 T G scaffold16031 ScafM SNP 0017.scaffold00052 340640 1 C T scaffold16031 ScafM SNP 0017.scaffold00052 340648 1 T C scaffold16031 ScafM SNP 0017.scaffold00052 340698 2 TA AG scaffold16031 ScafM SNP 0017.scaffold00052 340705 1 C T scaffold16031 ScafM SNP 0017.scaffold00052 340708 1 C A scaffold16031 ScafM SNP 0017.scaffold00052 340726 1 C G scaffold16031 ScafM SNP 0017.scaffold00052 340764 1 T C scaffold16031 ScafM SNP 0017.scaffold00052 340768 1 T C scaffold16031 ScafM SNP 0017.scaffold00052 340776 1 A C scaffold16031 ScafM SNP 0017.scaffold00052 340795 1 T C scaffold16031 ScafM SNP 0017.scaffold00052 340797 1 A T scaffold16031 ScafM INDEL 0017.scaffold00052 340806 1 C . scaffold16031 ScafM SNP 0017.scaffold00052 340810 1 C T scaffold16031 ScafM SNP 0017.scaffold00052 340816 1 G A scaffold16031 ScafM INDEL 0017.scaffold00052 340830 1 T . scaffold16031 ScafM SNP 0017.scaffold00052 340916 1 G A scaffold16031 ScafM SNP 0017.scaffold00052 340984 1 A C scaffold16031 ScafM INDEL 0017.scaffold00052 345769 1 . A scaffold18847 ScafM SNP 0017.scaffold00052 355741 1 A G scaffold6140 ScafM SNP 0017.scaffold00052 355929 1 A G scaffold6140 ScafM INDEL 0017.scaffold00052 361182 1 A . scaffold18847 ScafM SNP 0017.scaffold00052 384432 1 T A scaffold7960 ScafM SNP 0017.scaffold00052 384747 1 C T scaffold7960 ScafM SNP 0017.scaffold00052 384766 1 T A scaffold7960 ScafM SNP 0017.scaffold00052 384770 1 G C scaffold7960 ScafM SNP 0017.scaffold00052 384805 2 TC CG scaffold7960 ScafM SNP 0017.scaffold00052 384828 1 A G scaffold7960 ScafM SNP 0017.scaffold00052 403737 1 G T scaffold3210 ScafM INDEL 0017.scaffold00052 407793 2 TG .. scaffold3210 ScafM INDEL 0017.scaffold00052 414705 2 .. CC scaffold3210 ScafM SNP 0017.scaffold00052 431483 1 A C scaffold3210 ScafM INDEL 0017.scaffold00052 437924 1 T . scaffold3210 ScafM SNP 0017.scaffold00052 446709 1 A G scaffold3210 ReadM INDEL 0017.scaffold00052 448521 1 . A - ScafM INDEL 0017.scaffold00052 461150 3 CCA ... scaffold3210 ScafM SNP 0017.scaffold00052 461183 4 GCAA TTTT scaffold3210 ScafM SNP 0017.scaffold00052 461188 1 C T scaffold3210 ScafM SNP 0017.scaffold00052 461191 5 AACAA TTTTT scaffold3210 ScafM SNP 0017.scaffold00052 461197 1 A T scaffold3210 ScafM SNP 0017.scaffold00052 461200 2 CA TT scaffold3210 ScafM SNP 0017.scaffold00052 461203 3 CAC TTT scaffold3210 ScafM SNP 0017.scaffold00052 461207 4 AGAG TTTT scaffold3210 ScafM INDEL 0017.scaffold00052 465951 2 AA .. scaffold3210 ReadM SNP 0017.scaffold00052 487046 1 C T - ScafM INDEL 0017.scaffold00052 515478 7 TTAAAAT ....... scaffold959 ScafM INDEL 0017.scaffold00052 515501 3 ... CAT scaffold959 ScafM SNP 0017.scaffold00052 515518 1 C T scaffold959 ScafM SNP 0017.scaffold00052 515542 1 C T scaffold959 ScafM INDEL 0017.scaffold00052 515545 1 . C scaffold959 ScafM SNP 0017.scaffold00052 515567 1 G T scaffold959 ScafM SNP 0017.scaffold00052 515604 1 A T scaffold959 ScafM SNP 0017.scaffold00052 515680 1 G A scaffold959 ScafM SNP 0017.scaffold00052 515761 1 C T scaffold959 ScafM SNP 0017.scaffold00052 516416 1 A G scaffold8165 ScafM SNP 0017.scaffold00052 516524 1 T C scaffold8165 ScafM SNP 0017.scaffold00052 516539 1 T A scaffold8165 ScafM SNP 0017.scaffold00052 516613 1 T C scaffold8165 ScafM INDEL 0017.scaffold00052 516659 53 ..................................................... TTTCCCCTTTGCCATTAACCTGAAACGATTACTTGAGGTACCATGTCACGCTT scaffold8165 ScafM SNP 0017.scaffold00052 516877 2 TT CC scaffold8165 ScafM SNP 0017.scaffold00052 516880 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 516914 1 C G scaffold8165 ScafM SNP 0017.scaffold00052 516931 1 T C scaffold8165 ScafM SNP 0017.scaffold00052 517147 1 G C scaffold8165 ScafM SNP 0017.scaffold00052 517230 1 G T scaffold8165 ScafM SNP 0017.scaffold00052 517293 1 A C scaffold8165 ScafM SNP 0017.scaffold00052 517337 1 A C scaffold8165 ScafM SNP 0017.scaffold00052 517359 1 C G scaffold8165 ScafM SNP 0017.scaffold00052 517367 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 517412 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 517471 1 G A scaffold8165 ScafM SNP 0017.scaffold00052 517516 1 C A scaffold8165 ScafM SNP 0017.scaffold00052 517520 2 AA GG scaffold8165 ScafM SNP 0017.scaffold00052 517593 1 C A scaffold8165 ScafM SNP 0017.scaffold00052 517602 1 G A scaffold8165 ScafM SNP 0017.scaffold00052 517624 1 C A scaffold8165 ScafM SNP 0017.scaffold00052 517834 1 T G scaffold8165 ScafM SNP 0017.scaffold00052 517872 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 517918 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 517943 1 A G scaffold8165 ScafM SNP 0017.scaffold00052 517966 1 T C scaffold8165 ScafM SNP 0017.scaffold00052 517968 1 T C scaffold8165 ScafM SNP 0017.scaffold00052 518036 1 A T scaffold8165 ScafM INDEL 0017.scaffold00052 518042 9 ......... GCTAAAGCT scaffold8165 ScafM SNP 0017.scaffold00052 518056 1 G A scaffold8165 ScafM SNP 0017.scaffold00052 518208 1 T C scaffold8165 ScafM SNP 0017.scaffold00052 518290 1 T G scaffold8165 ScafM SNP 0017.scaffold00052 518374 1 C T scaffold8165 ScafM SNP 0017.scaffold00052 518378 1 T G scaffold8165 ScafM SNP 0017.scaffold00052 518480 1 A T scaffold8165 ScafM SNP 0017.scaffold00052 521656 1 G A scaffold38666 ScafM SNP 0017.scaffold00052 521688 1 T G scaffold38666 ScafM SNP 0017.scaffold00052 521706 1 G A scaffold38666 ScafM SNP 0017.scaffold00052 521727 1 A G scaffold38666 ScafM SNP 0017.scaffold00052 521899 1 G T scaffold38666 ScafM SNP 0017.scaffold00052 521955 1 A G scaffold38666 ScafM SNP 0017.scaffold00052 522170 1 C T scaffold38666 ScafM SNP 0017.scaffold00052 522188 1 A G scaffold38666 ScafM SNP 0017.scaffold00052 522195 1 A T scaffold38666 ScafM SNP 0017.scaffold00052 522248 1 C A scaffold38666 ScafM SNP 0017.scaffold00052 522340 1 T A scaffold38666 ScafM SNP 0017.scaffold00052 522473 1 C T scaffold38666 ScafM SNP 0017.scaffold00052 522500 1 C A scaffold38666 ScafM INDEL 0017.scaffold00052 522541 1 . A scaffold38666 ScafM SNP 0017.scaffold00052 522601 1 C A scaffold38666 ScafM SNP 0017.scaffold00052 522624 1 T A scaffold38666 ScafM SNP 0017.scaffold00052 522627 1 G A scaffold38666 ScafM SNP 0017.scaffold00052 522629 1 C A scaffold38666 ScafM SNP 0017.scaffold00052 522668 1 A G scaffold38666 ScafM INDEL 0017.scaffold00052 522844 1 A . scaffold412 ScafM SNP 0017.scaffold00052 522848 1 C T scaffold412 ScafM INDEL 0017.scaffold00052 528848 1 . T scaffold20538 ScafM INDEL 0017.scaffold00052 532435 1 . A scaffold5407 ReadM SNP 0017.scaffold00052 559010 1 C T - ScafM SNP 0017.scaffold00052 564596 1 A G scaffold7016 ScafM SNP 0017.scaffold00052 564611 1 T C scaffold7016 ScafM SNP 0017.scaffold00052 564616 2 GT AC scaffold7016 ScafM SNP 0017.scaffold00052 564684 1 A C scaffold7016 ScafM INDEL 0017.scaffold00052 564758 1 T . scaffold7016 ScafM SNP 0017.scaffold00052 564951 1 C T scaffold7016 ScafM SNP 0017.scaffold00052 564987 1 A G scaffold7016 ScafM SNP 0017.scaffold00052 564994 1 G A scaffold7016 ScafM INDEL 0017.scaffold00052 564998 1 . A scaffold7016 ScafM INDEL 0017.scaffold00052 564999 2 .. AA scaffold7016 ScafM INDEL 0017.scaffold00052 565006 1 T . scaffold7016 ScafM INDEL 0017.scaffold00052 565074 1 T . scaffold7016 ScafM INDEL 0017.scaffold00052 567259 1 . T scaffold7016 ScafM INDEL 0017.scaffold00052 575893 2 .. AA scaffold7016 ScafM INDEL 0017.scaffold00052 575976 2 .. AA scaffold7016 ScafM SNP 0017.scaffold00052 576706 1 A C scaffold7016 ScafM INDEL 0017.scaffold00052 588461 1 A . scaffold11230 ScafM SNP 0017.scaffold00052 588465 1 C A scaffold11230 ScafM SNP 0017.scaffold00052 588473 1 C G scaffold11230 ReadM INDEL 0018.scaffold00058 306 2 AT .. - ReadM SNP 0018.scaffold00058 344 1 C T - ScafM SNP 0018.scaffold00058 7284 1 C T scaffold6771 ScafM SNP 0018.scaffold00058 7297 1 A T scaffold6771 ScafM SNP 0018.scaffold00058 7312 1 T C scaffold6771 ScafM SNP 0018.scaffold00058 7330 1 C T scaffold6771 ScafM SNP 0018.scaffold00058 7366 1 T C scaffold6771 ScafM SNP 0018.scaffold00058 7461 2 AA TT scaffold6771 ScafM SNP 0018.scaffold00058 7513 1 C T scaffold6771 ScafM SNP 0018.scaffold00058 7536 1 G A scaffold6771 ScafM SNP 0018.scaffold00058 7541 1 T C scaffold6771 ScafM SNP 0018.scaffold00058 7574 1 C A scaffold6771 ScafM SNP 0018.scaffold00058 7591 1 G A scaffold6771 ScafM SNP 0018.scaffold00058 7608 1 A G scaffold6771 ScafM SNP 0018.scaffold00058 7618 1 A G scaffold6771 ScafM SNP 0018.scaffold00058 29257 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 29275 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 29288 1 A C scaffold11618 ScafM INDEL 0018.scaffold00058 29362 3 ATA ... scaffold11618 ScafM SNP 0018.scaffold00058 29366 1 A T scaffold11618 ScafM SNP 0018.scaffold00058 29390 2 TC CT scaffold11618 ScafM SNP 0018.scaffold00058 29412 1 C A scaffold11618 ScafM SNP 0018.scaffold00058 29459 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 29471 1 C T scaffold11618 ScafM INDEL 0018.scaffold00058 29490 1 C . scaffold11618 ScafM SNP 0018.scaffold00058 29510 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 29516 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 29582 2 AA TC scaffold11618 ScafM SNP 0018.scaffold00058 29597 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 29614 2 GC AT scaffold11618 ScafM SNP 0018.scaffold00058 29629 1 T C scaffold11618 ScafM INDEL 0018.scaffold00058 29689 11 ........... TTGCATTTCTT scaffold11618 ScafM SNP 0018.scaffold00058 29700 1 C G scaffold11618 ScafM SNP 0018.scaffold00058 29705 1 C G scaffold11618 ScafM SNP 0018.scaffold00058 29719 2 AT CA scaffold11618 ScafM SNP 0018.scaffold00058 29735 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 29740 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 29785 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 29803 1 G A scaffold11618 ScafM INDEL 0018.scaffold00058 29828 1 A . scaffold11618 ScafM SNP 0018.scaffold00058 29830 1 G C scaffold11618 ScafM SNP 0018.scaffold00058 29840 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 29844 1 A T scaffold11618 ScafM SNP 0018.scaffold00058 29890 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 29902 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 29910 1 A C scaffold11618 ScafM SNP 0018.scaffold00058 29914 2 CG TA scaffold11618 ScafM SNP 0018.scaffold00058 29930 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 29934 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 29969 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 29974 1 C T scaffold11618 ScafM INDEL 0018.scaffold00058 29983 3 ACA ... scaffold11618 ScafM SNP 0018.scaffold00058 29996 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 30018 1 C A scaffold11618 ScafM SNP 0018.scaffold00058 30039 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 30046 1 A G scaffold11618 ScafM INDEL 0018.scaffold00058 30051 1 G . scaffold11618 ScafM SNP 0018.scaffold00058 30059 1 A T scaffold11618 ScafM INDEL 0018.scaffold00058 30073 5 TGATC ..... scaffold11618 ScafM SNP 0018.scaffold00058 30097 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 30138 2 TA GG scaffold11618 ScafM SNP 0018.scaffold00058 30165 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 30247 1 A G scaffold11618 ScafM INDEL 0018.scaffold00058 30264 1 G . scaffold11618 ScafM SNP 0018.scaffold00058 30269 1 A C scaffold11618 ScafM SNP 0018.scaffold00058 30286 2 GA AT scaffold11618 ScafM SNP 0018.scaffold00058 30313 1 A T scaffold11618 ScafM SNP 0018.scaffold00058 30317 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 30342 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 30347 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 30362 1 G T scaffold11618 ScafM SNP 0018.scaffold00058 30376 1 C G scaffold11618 ScafM SNP 0018.scaffold00058 30405 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 34395 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 34397 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 34415 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 34419 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 34425 1 A T scaffold11618 ScafM INDEL 0018.scaffold00058 34428 2 AA .. scaffold11618 ScafM SNP 0018.scaffold00058 34436 1 G C scaffold11618 ScafM SNP 0018.scaffold00058 34454 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 34576 1 A G scaffold11618 Both SNP 0018.scaffold00058 34640 1 A T scaffold11618 ReadM SNP 0018.scaffold00058 35003 1 G A - ReadM SNP 0018.scaffold00058 35461 1 C A - ReadM SNP 0018.scaffold00058 35782 1 G T - ReadM SNP 0018.scaffold00058 36069 1 C G - ReadM SNP 0018.scaffold00058 36165 1 C T - ReadM INDEL 0018.scaffold00058 36322 1 C . - Both SNP 0018.scaffold00058 36650 1 C A scaffold11618 Both SNP 0018.scaffold00058 36837 1 G A scaffold11618 Both SNP 0018.scaffold00058 37007 1 C T scaffold11618 Both SNP 0018.scaffold00058 37070 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 37168 1 A G scaffold11618 ReadM SNP 0018.scaffold00058 37874 1 G A - ReadM SNP 0018.scaffold00058 37919 1 T C - ReadM SNP 0018.scaffold00058 38023 1 A T - ReadM SNP 0018.scaffold00058 38188 1 T A - ReadM SNP 0018.scaffold00058 38208 1 C G - ReadM INDEL 0018.scaffold00058 38272 1 . T - ReadM INDEL 0018.scaffold00058 38317 1 . T - ScafM INDEL 0018.scaffold00058 38473 1 . T scaffold11618 ReadM SNP 0018.scaffold00058 38591 1 T C - ReadM SNP 0018.scaffold00058 38791 1 G A - ScafM SNP 0018.scaffold00058 38891 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 38956 1 T C scaffold11618 Both SNP 0018.scaffold00058 38991 1 G A scaffold11618 Both SNP 0018.scaffold00058 39013 1 T C scaffold11618 ReadM SNP 0018.scaffold00058 39466 1 T C - ReadM SNP 0018.scaffold00058 39552 1 A G - ScafM SNP 0018.scaffold00058 39689 1 G A scaffold11618 ScafM INDEL 0018.scaffold00058 39697 5 ..... TTTAA scaffold11618 ReadM SNP 0018.scaffold00058 39931 1 G A - ReadM SNP 0018.scaffold00058 39938 1 A C - ReadM SNP 0018.scaffold00058 39947 1 T G - ReadM SNP 0018.scaffold00058 40026 1 G T - ReadM SNP 0018.scaffold00058 40216 1 G C - Both INDEL 0018.scaffold00058 40640 2 TT .. scaffold11618 Both INDEL 0018.scaffold00058 40737 1 T . scaffold11618 Both SNP 0018.scaffold00058 40930 1 G A scaffold11618 ScafM INDEL 0018.scaffold00058 40960 3 ... CTA scaffold11618 Both SNP 0018.scaffold00058 40996 1 A T scaffold11618 ReadM SNP 0018.scaffold00058 41068 1 T C - ReadM SNP 0018.scaffold00058 41298 1 G A - ReadM SNP 0018.scaffold00058 41313 1 T C - ReadM SNP 0018.scaffold00058 41349 1 C T - ReadM INDEL 0018.scaffold00058 41372 1 . T - ScafM SNP 0018.scaffold00058 41439 1 T C scaffold11618 ScafM INDEL 0018.scaffold00058 41480 1 . T scaffold11618 Both INDEL 0018.scaffold00058 41613 1 . C scaffold11618 ScafM SNP 0018.scaffold00058 42181 1 A T scaffold11618 ScafM INDEL 0018.scaffold00058 42644 1 . A scaffold11618 ScafM INDEL 0018.scaffold00058 42668 3 AGG ... scaffold11618 Both SNP 0018.scaffold00058 42706 1 G A scaffold11618 ReadM SNP 0018.scaffold00058 42884 1 C T - ReadM SNP 0018.scaffold00058 43163 1 G A - ScafM INDEL 0018.scaffold00058 43469 4 .... GATT scaffold11618 ScafM SNP 0018.scaffold00058 43513 1 G T scaffold11618 ScafM SNP 0018.scaffold00058 43535 2 GG TA scaffold11618 ScafM SNP 0018.scaffold00058 43544 1 A C scaffold11618 Both SNP 0018.scaffold00058 43621 1 T C scaffold11618 Both SNP 0018.scaffold00058 43638 1 T A scaffold11618 Both SNP 0018.scaffold00058 43659 1 A G scaffold11618 ReadM INDEL 0018.scaffold00058 43933 1 . T - ReadM SNP 0018.scaffold00058 44028 1 G A - ReadM SNP 0018.scaffold00058 44037 1 C T - Both SNP 0018.scaffold00058 44068 1 C A scaffold11618 ReadM SNP 0018.scaffold00058 44151 1 C T - ReadM SNP 0018.scaffold00058 44159 1 C G - ReadM SNP 0018.scaffold00058 44411 1 C T - ReadM SNP 0018.scaffold00058 44536 1 T C - Both SNP 0018.scaffold00058 44632 1 T C scaffold11618 Both SNP 0018.scaffold00058 44656 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 44677 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 44708 1 G T scaffold11618 ScafM SNP 0018.scaffold00058 44773 1 G A scaffold11618 ReadM SNP 0018.scaffold00058 44960 1 A G - ReadM SNP 0018.scaffold00058 44974 1 T C - ReadM SNP 0018.scaffold00058 45298 1 A G - ScafM INDEL 0018.scaffold00058 45427 5 TTAAA ..... scaffold11618 ScafM SNP 0018.scaffold00058 45476 1 G C scaffold11618 ScafM SNP 0018.scaffold00058 45482 1 A G scaffold11618 ScafM INDEL 0018.scaffold00058 45524 2 .. TT scaffold11618 ScafM INDEL 0018.scaffold00058 45640 6 AAGGGG .....C scaffold11618 ScafM INDEL 0018.scaffold00058 45698 2 AA .. scaffold11618 ReadM SNP 0018.scaffold00058 45777 1 T A - ReadM SNP 0018.scaffold00058 45780 1 T C - ReadM SNP 0018.scaffold00058 45847 1 A T - Both SNP 0018.scaffold00058 45949 1 G A scaffold11618 Both SNP 0018.scaffold00058 45982 1 G A scaffold11618 Both SNP 0018.scaffold00058 46016 1 C G scaffold11618 Both SNP 0018.scaffold00058 46068 2 CG TA scaffold11618 Both SNP 0018.scaffold00058 46139 1 T C scaffold11618 Both SNP 0018.scaffold00058 46214 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 46247 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 46254 1 A T scaffold11618 ScafM INDEL 0018.scaffold00058 46258 9 CGACCTATT ......... scaffold11618 ScafM SNP 0018.scaffold00058 46278 1 A G scaffold11618 Both SNP 0018.scaffold00058 46419 1 C T scaffold11618 Both SNP 0018.scaffold00058 46424 1 T G scaffold11618 Both SNP 0018.scaffold00058 46449 1 G T scaffold11618 Both INDEL 0018.scaffold00058 46631 1 G . scaffold11618 Both SNP 0018.scaffold00058 46675 1 A G scaffold11618 Both SNP 0018.scaffold00058 46685 1 T G scaffold11618 ReadM SNP 0018.scaffold00058 46955 1 C A - ReadM SNP 0018.scaffold00058 47020 1 T C - Both SNP 0018.scaffold00058 47124 1 G T scaffold11618 Both INDEL 0018.scaffold00058 47149 1 . T scaffold11618 Both SNP 0018.scaffold00058 47167 1 G C scaffold11618 ReadM SNP 0018.scaffold00058 47312 1 C A - ReadM SNP 0018.scaffold00058 47460 1 G A - ReadM SNP 0018.scaffold00058 47481 1 T A - ReadM SNP 0018.scaffold00058 47516 1 T C - ReadM SNP 0018.scaffold00058 47720 1 A G - ReadM SNP 0018.scaffold00058 47768 1 G T - ReadM SNP 0018.scaffold00058 47885 1 T G - ReadM SNP 0018.scaffold00058 48085 1 C T - ReadM SNP 0018.scaffold00058 48142 1 T C - ReadM SNP 0018.scaffold00058 48159 1 A T - Both SNP 0018.scaffold00058 48457 1 C A scaffold11618 ScafM SNP 0018.scaffold00058 48563 1 A T scaffold11618 ReadM SNP 0018.scaffold00058 48763 1 C T - ReadM SNP 0018.scaffold00058 48859 1 A G - ReadM SNP 0018.scaffold00058 49003 1 A G - ReadM SNP 0018.scaffold00058 49037 1 A C - ReadM SNP 0018.scaffold00058 49082 1 A G - ReadM SNP 0018.scaffold00058 49103 1 A G - Both SNP 0018.scaffold00058 49223 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 49334 1 T A scaffold11618 ReadM SNP 0018.scaffold00058 49385 1 C T - ReadM SNP 0018.scaffold00058 49579 1 A T - ReadM SNP 0018.scaffold00058 49614 1 G A - ReadM SNP 0018.scaffold00058 49637 1 T C - ReadM SNP 0018.scaffold00058 49714 1 A C - ReadM SNP 0018.scaffold00058 49766 1 T A - ReadM SNP 0018.scaffold00058 49776 1 C T - ReadM SNP 0018.scaffold00058 49811 1 T C - ScafM SNP 0018.scaffold00058 49896 2 GC TT scaffold11618 ScafM SNP 0018.scaffold00058 49915 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 49919 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 49923 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 49925 1 T A scaffold11618 Both SNP 0018.scaffold00058 49944 1 C T scaffold11618 ReadM SNP 0018.scaffold00058 50061 1 T G - ReadM SNP 0018.scaffold00058 50099 1 G A - ReadM SNP 0018.scaffold00058 50130 1 G T - ReadM SNP 0018.scaffold00058 50153 1 C G - ReadM SNP 0018.scaffold00058 50232 1 G A - ReadM SNP 0018.scaffold00058 50263 1 T A - ReadM SNP 0018.scaffold00058 50414 1 T C - ReadM SNP 0018.scaffold00058 50449 1 T A - ReadM SNP 0018.scaffold00058 50476 1 C T - ReadM SNP 0018.scaffold00058 50509 1 G T - ReadM SNP 0018.scaffold00058 50546 1 A G - ReadM SNP 0018.scaffold00058 50649 1 T G - ReadM SNP 0018.scaffold00058 50698 1 G A - Both SNP 0018.scaffold00058 50742 1 A T scaffold11618 Both SNP 0018.scaffold00058 50819 1 T C scaffold11618 Both SNP 0018.scaffold00058 50897 1 A C scaffold11618 ReadM SNP 0018.scaffold00058 50937 1 T C - Both SNP 0018.scaffold00058 51045 1 A T scaffold11618 Both SNP 0018.scaffold00058 51071 1 A G scaffold11618 Both SNP 0018.scaffold00058 51102 1 A T scaffold11618 Both SNP 0018.scaffold00058 51124 1 C T scaffold11618 Both SNP 0018.scaffold00058 51187 1 C T scaffold11618 Both SNP 0018.scaffold00058 51242 1 C T scaffold11618 Both SNP 0018.scaffold00058 51280 1 T C scaffold11618 Both SNP 0018.scaffold00058 51282 1 G A scaffold11618 ReadM SNP 0018.scaffold00058 51378 1 A G - ReadM SNP 0018.scaffold00058 51389 1 A G - ReadM INDEL 0018.scaffold00058 51505 1 T . - ReadM SNP 0018.scaffold00058 51593 1 C G - ReadM SNP 0018.scaffold00058 51628 1 G A - ReadM SNP 0018.scaffold00058 51735 1 T C - ReadM SNP 0018.scaffold00058 51869 1 G A - ReadM SNP 0018.scaffold00058 51883 1 C A - ReadM SNP 0018.scaffold00058 51902 1 C G - ReadM SNP 0018.scaffold00058 51923 2 TT GA - ReadM SNP 0018.scaffold00058 52032 1 T A - ReadM SNP 0018.scaffold00058 52097 1 C T - ReadM SNP 0018.scaffold00058 52113 1 T C - ReadM SNP 0018.scaffold00058 52122 1 T C - ReadM INDEL 0018.scaffold00058 52302 1 . T - ReadM SNP 0018.scaffold00058 52336 1 T C - ReadM SNP 0018.scaffold00058 52487 1 G A - ReadM INDEL 0018.scaffold00058 52661 1 . A - ReadM SNP 0018.scaffold00058 52743 1 T C - ReadM SNP 0018.scaffold00058 52845 1 A T - ReadM SNP 0018.scaffold00058 52935 1 T G - ReadM SNP 0018.scaffold00058 52943 1 T C - ReadM SNP 0018.scaffold00058 53016 1 T A - ReadM SNP 0018.scaffold00058 53067 1 G C - ReadM SNP 0018.scaffold00058 53089 1 T C - ReadM SNP 0018.scaffold00058 53109 1 C A - ReadM SNP 0018.scaffold00058 53148 1 A G - ReadM SNP 0018.scaffold00058 53159 1 T C - ReadM SNP 0018.scaffold00058 53165 1 A T - ReadM SNP 0018.scaffold00058 53249 1 G A - ReadM SNP 0018.scaffold00058 53302 1 G A - ReadM SNP 0018.scaffold00058 53340 1 T C - ReadM SNP 0018.scaffold00058 53348 1 T C - ReadM INDEL 0018.scaffold00058 53397 1 . G - ReadM SNP 0018.scaffold00058 53425 1 G A - ReadM SNP 0018.scaffold00058 53438 1 G A - ReadM SNP 0018.scaffold00058 53604 1 G A - ReadM SNP 0018.scaffold00058 53629 1 G A - ReadM SNP 0018.scaffold00058 53653 1 A G - ReadM SNP 0018.scaffold00058 53683 1 C A - ReadM SNP 0018.scaffold00058 53816 1 T C - ReadM SNP 0018.scaffold00058 53868 1 G A - ReadM SNP 0018.scaffold00058 53886 1 A G - ReadM SNP 0018.scaffold00058 53983 1 G A - ReadM SNP 0018.scaffold00058 54017 1 C A - ReadM SNP 0018.scaffold00058 54054 1 G T - ReadM SNP 0018.scaffold00058 54087 1 G A - ReadM SNP 0018.scaffold00058 54131 1 C T - ReadM SNP 0018.scaffold00058 54160 1 T G - ReadM SNP 0018.scaffold00058 54181 1 C G - ReadM SNP 0018.scaffold00058 54291 1 T G - ReadM SNP 0018.scaffold00058 54416 1 C G - ReadM SNP 0018.scaffold00058 54433 1 T C - ReadM SNP 0018.scaffold00058 54443 1 C T - ReadM SNP 0018.scaffold00058 54452 1 A C - ReadM SNP 0018.scaffold00058 54556 1 G A - ReadM SNP 0018.scaffold00058 54691 1 C A - ReadM SNP 0018.scaffold00058 54900 1 A G - ReadM SNP 0018.scaffold00058 54930 1 G A - ReadM INDEL 0018.scaffold00058 54951 1 C . - ScafM SNP 0018.scaffold00058 55107 1 G C scaffold11618 ScafM SNP 0018.scaffold00058 55153 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 55166 1 A C scaffold11618 Both SNP 0018.scaffold00058 55361 1 A G scaffold11618 Both SNP 0018.scaffold00058 55383 1 T A scaffold11618 Both SNP 0018.scaffold00058 55389 1 A G scaffold11618 ScafM INDEL 0018.scaffold00058 55461 4 TAGC .... scaffold11618 ScafM SNP 0018.scaffold00058 55473 1 T C scaffold11618 Both SNP 0018.scaffold00058 55586 1 A C scaffold11618 ScafM SNP 0018.scaffold00058 55748 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 55753 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 55756 1 C G scaffold11618 ScafM SNP 0018.scaffold00058 55776 1 T A scaffold11618 ScafM INDEL 0018.scaffold00058 55961 1 . T scaffold11618 ScafM SNP 0018.scaffold00058 56643 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 56677 1 A T scaffold11618 Both SNP 0018.scaffold00058 56732 1 A G scaffold11618 Both SNP 0018.scaffold00058 56765 1 A C scaffold11618 ScafM SNP 0018.scaffold00058 56818 1 T G scaffold11618 ScafM SNP 0018.scaffold00058 56827 1 A G scaffold11618 ScafM SNP 0018.scaffold00058 56847 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 56891 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 56898 1 C A scaffold11618 ScafM SNP 0018.scaffold00058 56933 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 57005 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 57025 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 57048 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 57551 1 C G scaffold11618 ReadM SNP 0018.scaffold00058 57639 1 G A - Both SNP 0018.scaffold00058 58248 1 T G scaffold11618 Both INDEL 0018.scaffold00058 58516 2 TT .. scaffold11618 Both SNP 0018.scaffold00058 58561 1 T C scaffold11618 Both SNP 0018.scaffold00058 58595 1 G A scaffold11618 Both SNP 0018.scaffold00058 58666 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 58727 1 G T scaffold11618 ScafM SNP 0018.scaffold00058 58750 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 58752 1 A T scaffold11618 ScafM SNP 0018.scaffold00058 58773 1 T C scaffold11618 ScafM SNP 0018.scaffold00058 58775 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 58778 1 G C scaffold11618 ScafM SNP 0018.scaffold00058 58782 1 T A scaffold11618 ScafM SNP 0018.scaffold00058 58822 1 C T scaffold11618 ScafM SNP 0018.scaffold00058 58849 1 A T scaffold11618 ScafM SNP 0018.scaffold00058 58854 1 G A scaffold11618 ScafM SNP 0018.scaffold00058 58889 1 C G scaffold11618 Both SNP 0018.scaffold00058 60109 1 G A scaffold11618 Both SNP 0018.scaffold00058 60370 1 G T scaffold11618 Both SNP 0018.scaffold00058 60725 1 C T scaffold11618 Both SNP 0018.scaffold00058 60946 1 T A scaffold11618 Both SNP 0018.scaffold00058 61983 1 C T scaffold11618 Both SNP 0018.scaffold00058 61986 1 C G scaffold11618 Both SNP 0018.scaffold00058 62196 1 C T scaffold11618 Both INDEL 0018.scaffold00058 62471 1 . A scaffold11618 Both SNP 0018.scaffold00058 62502 1 C T scaffold11618 Both SNP 0018.scaffold00058 62715 1 A T scaffold11618 Both SNP 0018.scaffold00058 62740 1 T C scaffold11618 Both SNP 0018.scaffold00058 62919 1 T C scaffold11618 Both SNP 0018.scaffold00058 62931 1 G C scaffold11618 Both SNP 0018.scaffold00058 62945 1 C T scaffold11618 Both SNP 0018.scaffold00058 63045 1 G A scaffold11618 ReadM SNP 0018.scaffold00058 66668 1 A C - ReadM SNP 0018.scaffold00058 66770 1 A C - ReadM SNP 0018.scaffold00058 66976 1 G T - ReadM SNP 0018.scaffold00058 67165 1 C T - ReadM SNP 0018.scaffold00058 67256 1 C T - ReadM SNP 0018.scaffold00058 67273 1 C T - ReadM SNP 0018.scaffold00058 67333 1 G T - ReadM SNP 0018.scaffold00058 67505 1 T A - ReadM SNP 0018.scaffold00058 67712 1 G A - ReadM SNP 0018.scaffold00058 67715 1 C T - ReadM SNP 0018.scaffold00058 70459 1 T C - ReadM SNP 0018.scaffold00058 70492 1 T C - ReadM SNP 0018.scaffold00058 70530 1 C G - ReadM SNP 0018.scaffold00058 70546 1 G A - ReadM SNP 0018.scaffold00058 70607 1 G A - ReadM SNP 0018.scaffold00058 70821 1 G A - ReadM SNP 0018.scaffold00058 70838 1 A G - ReadM SNP 0018.scaffold00058 70932 1 C T - ReadM SNP 0018.scaffold00058 71047 1 C T - ReadM SNP 0018.scaffold00058 71369 1 T C - ReadM SNP 0018.scaffold00058 74406 1 G C - ReadM SNP 0018.scaffold00058 74429 1 T C - ReadM SNP 0018.scaffold00058 74547 1 A G - ReadM SNP 0018.scaffold00058 74874 1 A T - ReadM SNP 0018.scaffold00058 74913 1 G A - ReadM SNP 0018.scaffold00058 75837 1 T A - ReadM SNP 0018.scaffold00058 76019 1 T C - ReadM SNP 0018.scaffold00058 76061 1 A G - ReadM SNP 0018.scaffold00058 76188 1 T C - ReadM SNP 0018.scaffold00058 76215 1 T A - ReadM SNP 0018.scaffold00058 76267 1 T C - ReadM SNP 0018.scaffold00058 76327 1 T G - ReadM SNP 0018.scaffold00058 76382 1 A G - ReadM SNP 0018.scaffold00058 76399 1 C A - ReadM SNP 0018.scaffold00058 76815 1 C T - ReadM SNP 0018.scaffold00058 76952 1 G T - ReadM SNP 0018.scaffold00058 76967 1 C T - ReadM SNP 0018.scaffold00058 77145 1 G C - ReadM SNP 0018.scaffold00058 77217 1 T C - ReadM SNP 0018.scaffold00058 77391 1 A G - ReadM SNP 0018.scaffold00058 77449 1 G A - ReadM SNP 0018.scaffold00058 77570 1 A C - ReadM SNP 0018.scaffold00058 77596 1 A C - ReadM SNP 0018.scaffold00058 77762 1 T C - ReadM SNP 0018.scaffold00058 78059 1 T C - ReadM INDEL 0018.scaffold00058 78099 1 T . - ReadM SNP 0018.scaffold00058 78242 1 G A - ReadM SNP 0018.scaffold00058 78568 1 C T - ReadM SNP 0018.scaffold00058 78762 1 T G - ReadM SNP 0018.scaffold00058 79098 1 C T - ReadM SNP 0018.scaffold00058 79242 1 T C - ReadM SNP 0018.scaffold00058 80358 1 T C - ReadM SNP 0018.scaffold00058 80446 1 G A - ReadM SNP 0018.scaffold00058 80525 1 A G - ReadM SNP 0018.scaffold00058 80769 1 T G - ReadM SNP 0018.scaffold00058 80779 1 G A - ReadM SNP 0018.scaffold00058 80817 1 C T - ReadM SNP 0018.scaffold00058 81818 1 G T - ReadM SNP 0018.scaffold00058 82266 1 C T - ReadM SNP 0018.scaffold00058 82303 1 A G - ReadM SNP 0018.scaffold00058 82490 1 G A - ReadM SNP 0018.scaffold00058 82521 1 T C - ReadM SNP 0018.scaffold00058 82778 1 C A - ReadM SNP 0018.scaffold00058 82835 1 C A - ReadM SNP 0018.scaffold00058 82880 1 A G - ReadM SNP 0018.scaffold00058 83110 1 G A - ReadM SNP 0018.scaffold00058 83152 1 C A - ReadM SNP 0018.scaffold00058 83402 1 T C - ReadM SNP 0018.scaffold00058 83647 1 C T - ReadM SNP 0018.scaffold00058 83696 1 T C - ReadM SNP 0018.scaffold00058 83873 1 G A - ReadM SNP 0018.scaffold00058 83991 1 A T - ReadM SNP 0018.scaffold00058 84040 1 C A - ReadM SNP 0018.scaffold00058 84172 1 T A - ReadM SNP 0018.scaffold00058 84270 1 G A - ReadM SNP 0018.scaffold00058 84613 1 T G - ReadM SNP 0018.scaffold00058 85038 1 T C - ReadM SNP 0018.scaffold00058 85151 1 G A - ReadM SNP 0018.scaffold00058 85262 1 A G - ReadM SNP 0018.scaffold00058 85443 1 C A - ReadM SNP 0018.scaffold00058 85571 1 T A - ReadM SNP 0018.scaffold00058 86497 1 C T - ReadM SNP 0018.scaffold00058 86763 1 T A - ReadM SNP 0018.scaffold00058 86868 1 A C - ReadM SNP 0018.scaffold00058 86872 1 T C - ReadM SNP 0018.scaffold00058 86950 1 A G - ReadM SNP 0018.scaffold00058 86970 1 C A - ReadM SNP 0018.scaffold00058 87046 1 A G - ReadM SNP 0018.scaffold00058 87163 1 T G - ReadM SNP 0018.scaffold00058 87403 1 G A - ReadM SNP 0018.scaffold00058 87481 1 C T - ReadM INDEL 0018.scaffold00058 87527 2 TG .. - ReadM SNP 0018.scaffold00058 87596 1 A G - ReadM SNP 0018.scaffold00058 87978 1 C A - ReadM SNP 0018.scaffold00058 88069 1 A G - ReadM INDEL 0018.scaffold00058 88372 1 C . - ReadM SNP 0018.scaffold00058 89286 1 A C - ReadM SNP 0018.scaffold00058 89579 1 C A - ReadM SNP 0018.scaffold00058 90026 1 G C - ReadM SNP 0018.scaffold00058 90405 1 T C - ReadM SNP 0018.scaffold00058 90453 1 T C - ReadM SNP 0018.scaffold00058 90618 1 A G - ReadM SNP 0018.scaffold00058 90806 1 A T - ReadM SNP 0018.scaffold00058 90872 1 A C - ReadM SNP 0018.scaffold00058 91305 1 A G - ReadM SNP 0018.scaffold00058 91397 1 C A - ReadM SNP 0018.scaffold00058 91696 1 A G - ReadM SNP 0018.scaffold00058 91699 1 T C - ReadM SNP 0018.scaffold00058 91913 1 C G - ReadM SNP 0018.scaffold00058 91939 1 G A - ReadM SNP 0018.scaffold00058 92103 1 G A - ReadM SNP 0018.scaffold00058 92233 1 G A - ReadM INDEL 0018.scaffold00058 92386 1 T . - ReadM SNP 0018.scaffold00058 92779 1 C T - ReadM SNP 0018.scaffold00058 93365 1 C T - ReadM SNP 0018.scaffold00058 93860 1 G C - ReadM SNP 0018.scaffold00058 93996 1 T C - ReadM SNP 0018.scaffold00058 94182 1 C T - ReadM SNP 0018.scaffold00058 94255 1 C T - ReadM SNP 0018.scaffold00058 94395 1 C A - ReadM SNP 0018.scaffold00058 94402 1 T G - ReadM SNP 0018.scaffold00058 94449 1 A G - ReadM SNP 0018.scaffold00058 94481 1 T C - ReadM SNP 0018.scaffold00058 94510 1 A G - ReadM SNP 0018.scaffold00058 94732 1 T C - ScafM INDEL 0018.scaffold00058 94983 2 .. TT scaffold1093 ScafM SNP 0018.scaffold00058 96823 1 T A scaffold1093 Both SNP 0018.scaffold00058 97046 1 G T scaffold1093 ReadM SNP 0018.scaffold00058 97534 1 T C - ReadM SNP 0018.scaffold00058 97613 1 T C - ReadM SNP 0018.scaffold00058 97632 1 G A - ReadM INDEL 0018.scaffold00058 97670 1 . A - ReadM SNP 0018.scaffold00058 97831 1 T G - ReadM SNP 0018.scaffold00058 97984 1 A T - ReadM SNP 0018.scaffold00058 98013 1 A T - ReadM SNP 0018.scaffold00058 98207 1 C T - ReadM SNP 0018.scaffold00058 98255 1 C G - ReadM SNP 0018.scaffold00058 98269 1 G A - ReadM SNP 0018.scaffold00058 98498 1 G A - ReadM SNP 0018.scaffold00058 98506 1 A C - ReadM SNP 0018.scaffold00058 98510 1 A T - ReadM SNP 0018.scaffold00058 98634 1 A G - ReadM SNP 0018.scaffold00058 98695 1 G A - ReadM SNP 0018.scaffold00058 98699 1 T C - ReadM SNP 0018.scaffold00058 98772 1 C T - ReadM SNP 0018.scaffold00058 99366 1 C T - ReadM SNP 0018.scaffold00058 99380 1 G A - ReadM SNP 0018.scaffold00058 99414 1 A C - ReadM SNP 0018.scaffold00058 99445 1 A G - ReadM SNP 0018.scaffold00058 100161 1 A G - ReadM SNP 0018.scaffold00058 100263 1 T C - ReadM SNP 0018.scaffold00058 100507 1 G C - ReadM SNP 0018.scaffold00058 100592 1 C T - ReadM INDEL 0018.scaffold00058 100943 1 . C - ReadM SNP 0018.scaffold00058 100966 1 T A - ReadM SNP 0018.scaffold00058 101013 1 C A - ReadM SNP 0018.scaffold00058 101491 1 G A - Both INDEL 0018.scaffold00058 101622 1 . T scaffold1093 Both SNP 0018.scaffold00058 101866 1 C G scaffold1093 Both SNP 0018.scaffold00058 101889 1 G A scaffold1093 Both SNP 0018.scaffold00058 101971 1 C A scaffold1093 Both SNP 0018.scaffold00058 102007 1 A G scaffold1093 Both SNP 0018.scaffold00058 102084 1 T C scaffold1093 Both SNP 0018.scaffold00058 102162 1 C T scaffold1093 Both SNP 0018.scaffold00058 102585 1 C T scaffold1093 Both SNP 0018.scaffold00058 102607 1 C G scaffold1093 Both SNP 0018.scaffold00058 102686 1 G A scaffold1093 Both SNP 0018.scaffold00058 102799 1 C T scaffold1093 Both SNP 0018.scaffold00058 102979 1 A G scaffold1093 Both INDEL 0018.scaffold00058 103179 1 G . scaffold1093 Both SNP 0018.scaffold00058 103273 1 A G scaffold1093 Both SNP 0018.scaffold00058 103285 1 C G scaffold1093 Both SNP 0018.scaffold00058 103433 1 G A scaffold1093 Both SNP 0018.scaffold00058 103489 1 A C scaffold1093 ScafM INDEL 0018.scaffold00058 103897 31 ............................... CAACAAGAACAAGATGTCTATTTTTGTTACT scaffold1093 ScafM SNP 0018.scaffold00058 104331 1 T C scaffold1093 ScafM SNP 0018.scaffold00058 104346 1 G C scaffold1093 Both INDEL 0018.scaffold00058 104425 1 . A scaffold1093 Both SNP 0018.scaffold00058 104479 1 A G scaffold1093 ScafM SNP 0018.scaffold00058 105026 1 C T scaffold1093 ScafM SNP 0018.scaffold00058 106031 1 T C scaffold1093 ScafM SNP 0018.scaffold00058 106099 1 C T scaffold1093 ScafM SNP 0018.scaffold00058 106181 1 G A scaffold1093 Both SNP 0018.scaffold00058 106495 1 T C scaffold1093 ReadM SNP 0018.scaffold00058 108080 1 C G - ReadM SNP 0018.scaffold00058 108155 1 A G - ReadM SNP 0018.scaffold00058 108395 1 A G - ReadM SNP 0018.scaffold00058 108432 1 A G - ReadM SNP 0018.scaffold00058 108610 1 G A - ReadM SNP 0018.scaffold00058 108693 1 T A - ReadM SNP 0018.scaffold00058 108806 1 C T - ReadM SNP 0018.scaffold00058 109001 1 A T - ReadM SNP 0018.scaffold00058 109064 1 A G - ReadM SNP 0018.scaffold00058 109072 1 T C - ReadM SNP 0018.scaffold00058 109085 1 C T - ReadM SNP 0018.scaffold00058 109144 1 A T - ReadM SNP 0018.scaffold00058 109330 1 A T - Both SNP 0018.scaffold00058 110302 1 C T scaffold1093 Both SNP 0018.scaffold00058 110619 1 C T scaffold1093 Both SNP 0018.scaffold00058 111066 1 A C scaffold1093 ScafM SNP 0018.scaffold00058 111250 1 G A scaffold1093 Both SNP 0018.scaffold00058 111686 1 A T scaffold1093 Both SNP 0018.scaffold00058 111722 1 A T scaffold1093 Both INDEL 0018.scaffold00058 111760 2 TT .. scaffold1093 Both SNP 0018.scaffold00058 111802 1 C T scaffold1093 Both SNP 0018.scaffold00058 111994 1 T C scaffold1093 Both SNP 0018.scaffold00058 112114 1 A G scaffold1093 Both SNP 0018.scaffold00058 112152 1 A G scaffold1093 Both INDEL 0018.scaffold00058 112190 1 . C scaffold1093 Both SNP 0018.scaffold00058 112251 1 T G scaffold1093 Both SNP 0018.scaffold00058 112261 1 T A scaffold1093 Both SNP 0018.scaffold00058 112333 1 A G scaffold1093 Both SNP 0018.scaffold00058 112379 1 A T scaffold1093 Both SNP 0018.scaffold00058 112407 1 C T scaffold1093 Both SNP 0018.scaffold00058 112531 1 C G scaffold1093 Both SNP 0018.scaffold00058 112721 1 C T scaffold1093 Both SNP 0018.scaffold00058 112909 1 C T scaffold1093 Both SNP 0018.scaffold00058 113040 1 G A scaffold1093 Both SNP 0018.scaffold00058 113407 1 C T scaffold1093 ScafM INDEL 0018.scaffold00058 113456 1 . A scaffold1093 ScafM INDEL 0018.scaffold00058 113459 1 . A scaffold1093 Both SNP 0018.scaffold00058 113469 1 C A scaffold1093 Both SNP 0018.scaffold00058 113665 1 T C scaffold1093 ReadM SNP 0018.scaffold00058 113752 1 G A - ReadM SNP 0018.scaffold00058 114383 1 C A - ReadM SNP 0018.scaffold00058 114462 1 T C - ReadM SNP 0018.scaffold00058 114674 1 C A - ReadM INDEL 0018.scaffold00058 114792 1 A . - ReadM SNP 0018.scaffold00058 117345 1 T A - ReadM SNP 0018.scaffold00058 117385 1 A G - ReadM SNP 0018.scaffold00058 117417 1 A G - ReadM SNP 0018.scaffold00058 117487 1 G C - ReadM SNP 0018.scaffold00058 117746 1 G A - ReadM SNP 0018.scaffold00058 118118 1 A G - ReadM SNP 0018.scaffold00058 118236 1 C T - ReadM SNP 0018.scaffold00058 118485 1 T A - ReadM SNP 0018.scaffold00058 118634 1 G T - ReadM SNP 0018.scaffold00058 118741 1 C T - ReadM SNP 0018.scaffold00058 118766 1 G C - ReadM SNP 0018.scaffold00058 118854 1 C T - ReadM SNP 0018.scaffold00058 118913 1 T C - ReadM SNP 0018.scaffold00058 118977 1 C A - ReadM SNP 0018.scaffold00058 119211 1 A C - ReadM SNP 0018.scaffold00058 119251 1 A G - ReadM SNP 0018.scaffold00058 119478 1 C G - ReadM SNP 0018.scaffold00058 119588 1 G A - ReadM SNP 0018.scaffold00058 119756 1 A T - ReadM SNP 0018.scaffold00058 119900 1 G T - ReadM SNP 0018.scaffold00058 120244 1 C A - ReadM SNP 0018.scaffold00058 120820 1 T C - ReadM SNP 0018.scaffold00058 121709 1 G C - ReadM SNP 0018.scaffold00058 121788 1 C T - ReadM SNP 0018.scaffold00058 122468 1 C T - ReadM SNP 0018.scaffold00058 122991 1 G T - ReadM SNP 0018.scaffold00058 123009 1 G A - ReadM SNP 0018.scaffold00058 123107 1 G A - ReadM SNP 0018.scaffold00058 123251 1 C A - ReadM SNP 0018.scaffold00058 123505 1 A C - ReadM SNP 0018.scaffold00058 123529 1 T C - ReadM SNP 0018.scaffold00058 123860 1 C T - ReadM SNP 0018.scaffold00058 124100 1 T A - ReadM SNP 0018.scaffold00058 124222 1 T C - ReadM SNP 0018.scaffold00058 124356 1 G A - ReadM SNP 0018.scaffold00058 124740 1 C T - ReadM SNP 0018.scaffold00058 124785 1 A G - ReadM SNP 0018.scaffold00058 124815 1 A G - ReadM SNP 0018.scaffold00058 124923 1 G A - ReadM SNP 0018.scaffold00058 125033 1 T C - ScafM SNP 0018.scaffold00058 144314 1 T C scaffold17906 ReadM SNP 0018.scaffold00058 144657 2 TT GA - ReadM SNP 0018.scaffold00058 146934 1 A G - ReadM SNP 0018.scaffold00058 146943 1 A G - ReadM SNP 0018.scaffold00058 147031 1 A T - ReadM SNP 0018.scaffold00058 147060 1 C T - ReadM SNP 0018.scaffold00058 147081 1 A C - ReadM SNP 0018.scaffold00058 147402 1 C T - ReadM SNP 0018.scaffold00058 147510 1 C T - Both SNP 0018.scaffold00058 147648 1 T A scaffold992 Both SNP 0018.scaffold00058 147733 1 C T scaffold992 Both SNP 0018.scaffold00058 147742 1 G A scaffold992 Both SNP 0018.scaffold00058 147885 1 T C scaffold992 Both SNP 0018.scaffold00058 147920 1 C T scaffold992 Both SNP 0018.scaffold00058 147949 1 C A scaffold992 Both INDEL 0018.scaffold00058 147965 1 . C scaffold992 ScafM SNP 0018.scaffold00058 148518 1 C T scaffold992 Both SNP 0018.scaffold00058 148728 1 C T scaffold992 Both SNP 0018.scaffold00058 149136 1 T A scaffold992 ReadM SNP 0018.scaffold00058 149250 1 T C - ReadM SNP 0018.scaffold00058 149373 2 TT CA - ReadM INDEL 0018.scaffold00058 149594 1 . T - ReadM SNP 0018.scaffold00058 149662 1 G A - ReadM SNP 0018.scaffold00058 149721 1 G T - ReadM SNP 0018.scaffold00058 149847 1 A G - ReadM INDEL 0018.scaffold00058 149998 1 . A - Both SNP 0018.scaffold00058 150285 1 T C scaffold992 Both SNP 0018.scaffold00058 150492 1 A G scaffold992 ScafM SNP 0018.scaffold00058 150730 1 C T scaffold992 ScafM SNP 0018.scaffold00058 150756 1 A G scaffold992 ScafM SNP 0018.scaffold00058 150797 1 G A scaffold992 ScafM SNP 0018.scaffold00058 150818 1 G A scaffold992 ScafM SNP 0018.scaffold00058 150855 1 G A scaffold992 ScafM SNP 0018.scaffold00058 150885 1 C A scaffold992 ScafM SNP 0018.scaffold00058 150895 1 T A scaffold992 ScafM SNP 0018.scaffold00058 150913 1 C G scaffold992 ScafM SNP 0018.scaffold00058 150916 1 T C scaffold992 ScafM SNP 0018.scaffold00058 150928 1 C T scaffold992 ScafM SNP 0018.scaffold00058 151885 1 G T scaffold992 ScafM SNP 0018.scaffold00058 151901 1 T A scaffold992 ScafM SNP 0018.scaffold00058 151912 1 G A scaffold992 ScafM SNP 0018.scaffold00058 151927 1 G A scaffold992 ScafM SNP 0018.scaffold00058 151953 1 T A scaffold992 ScafM SNP 0018.scaffold00058 151978 1 A G scaffold992 ScafM SNP 0018.scaffold00058 152065 1 A C scaffold992 ScafM SNP 0018.scaffold00058 152142 1 G A scaffold992 ScafM SNP 0018.scaffold00058 152145 1 G A scaffold992 ScafM SNP 0018.scaffold00058 152171 1 G A scaffold992 ScafM SNP 0018.scaffold00058 152177 1 A G scaffold992 ScafM SNP 0018.scaffold00058 152183 1 A T scaffold992 ScafM SNP 0018.scaffold00058 152195 2 AA GG scaffold992 ScafM SNP 0018.scaffold00058 152207 1 C T scaffold992 Both SNP 0018.scaffold00058 152302 1 G A scaffold992 Both SNP 0018.scaffold00058 152344 1 C T scaffold992 Both SNP 0018.scaffold00058 152446 1 A T scaffold992 Both SNP 0018.scaffold00058 152608 1 G A scaffold992 Both SNP 0018.scaffold00058 152625 1 A C scaffold992 ScafM SNP 0018.scaffold00058 152638 1 A T scaffold992 Both SNP 0018.scaffold00058 152661 1 T A scaffold992 Both SNP 0018.scaffold00058 152696 1 C T scaffold992 Both SNP 0018.scaffold00058 152835 1 A C scaffold992 Both SNP 0018.scaffold00058 152885 1 C T scaffold992 ScafM SNP 0018.scaffold00058 152912 1 G A scaffold992 ScafM SNP 0018.scaffold00058 152918 1 A G scaffold992 ScafM SNP 0018.scaffold00058 152920 1 C T scaffold992 ScafM SNP 0018.scaffold00058 152968 1 A G scaffold992 ScafM SNP 0018.scaffold00058 152980 1 C A scaffold992 ScafM SNP 0018.scaffold00058 153007 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153017 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153233 1 C T scaffold992 ScafM SNP 0018.scaffold00058 153251 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153259 1 G T scaffold992 ScafM SNP 0018.scaffold00058 153312 1 C A scaffold992 ScafM SNP 0018.scaffold00058 153316 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153325 2 CA GG scaffold992 ScafM SNP 0018.scaffold00058 153332 1 T C scaffold992 ScafM SNP 0018.scaffold00058 153336 1 T C scaffold992 Both SNP 0018.scaffold00058 153355 1 A G scaffold992 Both SNP 0018.scaffold00058 153442 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153452 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153463 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153465 1 C T scaffold992 ScafM SNP 0018.scaffold00058 153487 1 C G scaffold992 ScafM SNP 0018.scaffold00058 153496 1 A T scaffold992 ScafM SNP 0018.scaffold00058 153511 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153521 1 T A scaffold992 ScafM SNP 0018.scaffold00058 153525 1 G C scaffold992 Both SNP 0018.scaffold00058 153543 1 A T scaffold992 ScafM SNP 0018.scaffold00058 153658 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153664 1 T C scaffold992 ScafM SNP 0018.scaffold00058 153668 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153682 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153707 2 CA TG scaffold992 ScafM SNP 0018.scaffold00058 153732 1 G T scaffold992 ScafM SNP 0018.scaffold00058 153736 1 A T scaffold992 ScafM SNP 0018.scaffold00058 153763 1 C G scaffold992 ScafM SNP 0018.scaffold00058 153803 1 T C scaffold992 ScafM SNP 0018.scaffold00058 153823 1 G A scaffold992 ScafM SNP 0018.scaffold00058 153827 1 A G scaffold992 ScafM SNP 0018.scaffold00058 153830 1 G T scaffold992 Both SNP 0018.scaffold00058 153884 1 C G scaffold992 Both SNP 0018.scaffold00058 153998 1 T A scaffold992 Both SNP 0018.scaffold00058 154015 1 A G scaffold992 Both SNP 0018.scaffold00058 154094 1 A T scaffold992 Both SNP 0018.scaffold00058 154112 1 G A scaffold992 Both SNP 0018.scaffold00058 154153 1 C G scaffold992 ScafM SNP 0018.scaffold00058 154212 1 A G scaffold992 ScafM INDEL 0018.scaffold00058 154229 8 CATAGGGG ........ scaffold992 ScafM SNP 0018.scaffold00058 154249 1 T A scaffold992 Both SNP 0018.scaffold00058 154270 1 A G scaffold992 Both SNP 0018.scaffold00058 154367 1 G T scaffold992 Both SNP 0018.scaffold00058 154402 1 A T scaffold992 Both SNP 0018.scaffold00058 154437 1 T C scaffold992 ScafM SNP 0018.scaffold00058 154452 1 T C scaffold992 Both SNP 0018.scaffold00058 154458 1 A G scaffold992 Both SNP 0018.scaffold00058 154511 1 G A scaffold992 Both SNP 0018.scaffold00058 154524 1 A G scaffold992 ScafM SNP 0018.scaffold00058 154554 1 C T scaffold992 Both SNP 0018.scaffold00058 154604 1 T G scaffold992 Both SNP 0018.scaffold00058 154656 1 G A scaffold992 ScafM SNP 0018.scaffold00058 154694 1 G A scaffold992 ScafM INDEL 0018.scaffold00058 154696 1 . A scaffold992 ScafM INDEL 0018.scaffold00058 154697 2 .. TT scaffold992 ScafM SNP 0018.scaffold00058 154700 1 G T scaffold992 ScafM INDEL 0018.scaffold00058 154756 18 .................. AAGCAAGAATCATGAGAG scaffold992 ScafM INDEL 0018.scaffold00058 154757 2 .. CA scaffold992 ScafM SNP 0018.scaffold00058 154807 1 C G scaffold992 ScafM SNP 0018.scaffold00058 154809 1 A G scaffold992 ScafM INDEL 0018.scaffold00058 154837 2 GC .. scaffold992 ScafM INDEL 0018.scaffold00058 154841 1 C . scaffold992 ScafM SNP 0018.scaffold00058 154873 1 A C scaffold992 ScafM SNP 0018.scaffold00058 154876 1 C T scaffold992 ScafM SNP 0018.scaffold00058 154911 1 T C scaffold992 ScafM SNP 0018.scaffold00058 154953 1 A G scaffold992 ScafM SNP 0018.scaffold00058 154957 1 G A scaffold992 ScafM SNP 0018.scaffold00058 154959 1 A G scaffold992 ScafM SNP 0018.scaffold00058 154979 1 G C scaffold992 ScafM SNP 0018.scaffold00058 154994 1 A G scaffold992 ScafM SNP 0018.scaffold00058 154996 1 T A scaffold992 ScafM SNP 0018.scaffold00058 154998 1 C T scaffold992 ScafM SNP 0018.scaffold00058 155078 1 G A scaffold992 ScafM SNP 0018.scaffold00058 155102 1 C A scaffold992 ScafM SNP 0018.scaffold00058 155114 1 T C scaffold992 ScafM SNP 0018.scaffold00058 155124 1 C A scaffold992 ScafM SNP 0018.scaffold00058 155152 1 T C scaffold992 ScafM SNP 0018.scaffold00058 155155 1 A G scaffold992 ScafM SNP 0018.scaffold00058 155173 1 A G scaffold992 ScafM SNP 0018.scaffold00058 155176 1 A T scaffold992 ScafM SNP 0018.scaffold00058 155181 2 TG CA scaffold992 ReadM SNP 0018.scaffold00058 155295 1 C T - ReadM SNP 0018.scaffold00058 155368 1 T G - ReadM SNP 0018.scaffold00058 155394 1 G T - ReadM SNP 0018.scaffold00058 155665 1 G A - ReadM SNP 0018.scaffold00058 155680 1 G A - ReadM SNP 0018.scaffold00058 155697 1 G A - ReadM SNP 0018.scaffold00058 155881 1 T A - ReadM SNP 0018.scaffold00058 155890 1 G A - ReadM INDEL 0018.scaffold00058 155908 1 C . - ReadM INDEL 0018.scaffold00058 156146 1 . G - ScafM INDEL 0018.scaffold00058 156426 8 ........ GCATGCAT scaffold992 ScafM SNP 0018.scaffold00058 156438 1 A T scaffold992 ScafM INDEL 0018.scaffold00058 156477 1 . T scaffold992 ScafM SNP 0018.scaffold00058 156486 1 T C scaffold992 ScafM SNP 0018.scaffold00058 156506 1 T C scaffold992 ScafM INDEL 0018.scaffold00058 156535 1 T . scaffold992 ScafM SNP 0018.scaffold00058 156546 1 A C scaffold992 ScafM SNP 0018.scaffold00058 156557 1 A G scaffold992 ScafM SNP 0018.scaffold00058 156579 1 G A scaffold992 ScafM SNP 0018.scaffold00058 156595 1 G C scaffold992 ScafM SNP 0018.scaffold00058 156597 1 C T scaffold992 Both SNP 0018.scaffold00058 156676 1 A C scaffold992 Both SNP 0018.scaffold00058 156693 1 T A scaffold992 ScafM SNP 0018.scaffold00058 156733 1 A G scaffold992 ScafM SNP 0018.scaffold00058 156767 1 T A scaffold992 ScafM SNP 0018.scaffold00058 156773 1 G C scaffold992 ScafM SNP 0018.scaffold00058 156810 1 A T scaffold992 ScafM SNP 0018.scaffold00058 156814 1 C T scaffold992 Both SNP 0018.scaffold00058 156845 1 C T scaffold992 Both SNP 0018.scaffold00058 156851 1 G T scaffold992 ReadM INDEL 0018.scaffold00058 156924 1 C . - ReadM SNP 0018.scaffold00058 156977 1 G A - ReadM SNP 0018.scaffold00058 157062 1 T C - ReadM SNP 0018.scaffold00058 157066 1 A G - ReadM SNP 0018.scaffold00058 157074 1 G A - ScafM SNP 0018.scaffold00058 157171 1 G T scaffold992 ScafM SNP 0018.scaffold00058 157192 1 G A scaffold992 Both SNP 0018.scaffold00058 157222 1 A G scaffold992 Both SNP 0018.scaffold00058 157233 1 G A scaffold992 Both INDEL 0018.scaffold00058 157239 1 . T scaffold992 Both SNP 0018.scaffold00058 157311 1 G A scaffold992 ScafM SNP 0018.scaffold00058 157340 2 CT GC scaffold992 ScafM INDEL 0018.scaffold00058 157350 1 T . scaffold992 ScafM INDEL 0018.scaffold00058 157366 10 .......... GTTTTCAAAA scaffold992 ScafM INDEL 0018.scaffold00058 157368 1 . T scaffold992 ScafM SNP 0018.scaffold00058 157370 1 A T scaffold992 ScafM SNP 0018.scaffold00058 157373 1 T A scaffold992 ScafM SNP 0018.scaffold00058 157377 3 CCC TGT scaffold992 ScafM SNP 0018.scaffold00058 157383 1 G C scaffold992 Both SNP 0018.scaffold00058 157427 1 C G scaffold992 Both INDEL 0018.scaffold00058 157522 1 . A scaffold992 Both SNP 0018.scaffold00058 157524 1 G A scaffold992 ScafM INDEL 0018.scaffold00058 157686 8 ........ TAATCATA scaffold992 ReadM INDEL 0018.scaffold00058 157937 1 C . - ScafM SNP 0018.scaffold00058 158331 1 C T scaffold992 Both INDEL 0018.scaffold00058 158363 1 A . scaffold992 ScafM SNP 0018.scaffold00058 158369 1 A T scaffold992 Both SNP 0018.scaffold00058 158376 1 G C scaffold992 Both SNP 0018.scaffold00058 158482 1 G A scaffold992 Both SNP 0018.scaffold00058 158490 1 T A scaffold992 Both SNP 0018.scaffold00058 158505 1 G A scaffold992 Both SNP 0018.scaffold00058 158548 1 G A scaffold992 Both SNP 0018.scaffold00058 158638 1 G T scaffold992 ScafM INDEL 0018.scaffold00058 158680 19 ................... GAATTCATAACTTTCGGTT scaffold992 ScafM INDEL 0018.scaffold00058 158710 1 . T scaffold992 ScafM SNP 0018.scaffold00058 158725 2 TT AG scaffold992 ScafM SNP 0018.scaffold00058 158754 1 C A scaffold992 ScafM SNP 0018.scaffold00058 158777 1 G C scaffold992 ScafM SNP 0018.scaffold00058 158807 1 T C scaffold992 ScafM INDEL 0018.scaffold00058 158819 8 TGCGCGTT ........ scaffold992 ScafM INDEL 0018.scaffold00058 158829 1 G . scaffold992 ScafM INDEL 0018.scaffold00058 158832 2 TT .C scaffold992 ScafM SNP 0018.scaffold00058 158849 1 G T scaffold992 ScafM SNP 0018.scaffold00058 158860 1 A G scaffold992 ScafM SNP 0018.scaffold00058 158863 1 C A scaffold992 Both SNP 0018.scaffold00058 159028 1 T A scaffold992 Both SNP 0018.scaffold00058 159098 1 T C scaffold992 Both INDEL 0018.scaffold00058 159126 1 A . scaffold992 Both SNP 0018.scaffold00058 159154 1 A T scaffold992 Both SNP 0018.scaffold00058 159235 1 G T scaffold992 Both SNP 0018.scaffold00058 159242 1 G A scaffold992 Both SNP 0018.scaffold00058 159413 1 T A scaffold992 Both SNP 0018.scaffold00058 159429 1 T G scaffold992 Both SNP 0018.scaffold00058 159550 1 C T scaffold992 ScafM SNP 0018.scaffold00058 159568 1 A T scaffold992 ScafM SNP 0018.scaffold00058 159570 1 T G scaffold992 Both SNP 0018.scaffold00058 159628 1 A C scaffold992 Both SNP 0018.scaffold00058 159633 1 A G scaffold992 Both SNP 0018.scaffold00058 159655 1 A T scaffold992 ScafM INDEL 0018.scaffold00058 159722 5 ATTTT ..... scaffold992 ScafM SNP 0018.scaffold00058 159735 1 C T scaffold992 ScafM SNP 0018.scaffold00058 159738 2 CA TT scaffold992 ScafM SNP 0018.scaffold00058 159746 1 C G scaffold992 ScafM INDEL 0018.scaffold00058 159793 47 ............................................... CTAACACATGAGCTTGATTAACTTGCTGACCAGAAACTTTAGAAATG scaffold992 ScafM SNP 0018.scaffold00058 159868 1 T C scaffold992 ScafM SNP 0018.scaffold00058 159911 1 G A scaffold992 ScafM INDEL 0018.scaffold00058 159918 2 AA .G scaffold992 ScafM SNP 0018.scaffold00058 159949 1 T C scaffold992 ScafM SNP 0018.scaffold00058 159999 2 GG AA scaffold992 ScafM SNP 0018.scaffold00058 160043 1 A T scaffold992 ReadM SNP 0018.scaffold00058 160078 1 A C - ReadM SNP 0018.scaffold00058 160105 1 C T - Both SNP 0018.scaffold00058 160881 1 C T scaffold992 ScafM SNP 0018.scaffold00058 160900 1 C T scaffold992 ScafM SNP 0018.scaffold00058 160935 1 C T scaffold992 ScafM SNP 0018.scaffold00058 160956 1 G C scaffold992 ScafM SNP 0018.scaffold00058 160970 1 T G scaffold992 ScafM SNP 0018.scaffold00058 161006 1 C T scaffold992 ScafM INDEL 0018.scaffold00058 161058 3 TAT ... scaffold992 ScafM SNP 0018.scaffold00058 161072 1 A G scaffold992 ScafM SNP 0018.scaffold00058 161077 1 A G scaffold992 ScafM SNP 0018.scaffold00058 161092 1 C T scaffold992 ScafM SNP 0018.scaffold00058 161140 1 A C scaffold992 ScafM INDEL 0018.scaffold00058 161159 1 A . scaffold992 ScafM SNP 0018.scaffold00058 161171 1 C T scaffold992 ScafM INDEL 0018.scaffold00058 161179 5 ..... AAATC scaffold992 ScafM SNP 0018.scaffold00058 161245 1 C G scaffold992 ScafM SNP 0018.scaffold00058 161261 1 G T scaffold992 ScafM SNP 0018.scaffold00058 161293 2 GC AT scaffold992 Both SNP 0018.scaffold00058 161379 1 T C scaffold992 ScafM SNP 0018.scaffold00058 161415 1 T C scaffold992 ScafM SNP 0018.scaffold00058 161426 1 G A scaffold992 ScafM SNP 0018.scaffold00058 161437 1 C T scaffold992 Both SNP 0018.scaffold00058 161496 1 T C scaffold992 Both SNP 0018.scaffold00058 161502 1 G A scaffold992 ReadM SNP 0018.scaffold00058 161582 1 C G - ReadM SNP 0018.scaffold00058 161670 1 G A - ReadM SNP 0018.scaffold00058 161722 1 G A - ReadM SNP 0018.scaffold00058 161744 1 C T - ScafM INDEL 0018.scaffold00058 162001 3 ... CAG scaffold992 ReadM SNP 0018.scaffold00058 162021 1 A G - Both SNP 0018.scaffold00058 162129 1 A G scaffold992 Both SNP 0018.scaffold00058 162143 1 C T scaffold992 Both SNP 0018.scaffold00058 162181 1 A C scaffold992 ScafM SNP 0018.scaffold00058 162206 2 TG CA scaffold992 ScafM SNP 0018.scaffold00058 162211 1 C A scaffold992 ScafM SNP 0018.scaffold00058 162221 1 A G scaffold992 ScafM SNP 0018.scaffold00058 162226 1 C T scaffold992 ScafM SNP 0018.scaffold00058 162236 1 A C scaffold992 Both SNP 0018.scaffold00058 162324 1 T C scaffold992 ScafM SNP 0018.scaffold00058 162335 1 A C scaffold992 ScafM SNP 0018.scaffold00058 162344 1 C T scaffold992 ScafM INDEL 0018.scaffold00058 162357 1 . T scaffold992 ScafM SNP 0018.scaffold00058 162388 1 A G scaffold992 ScafM SNP 0018.scaffold00058 162398 1 G A scaffold992 ScafM SNP 0018.scaffold00058 162407 1 C T scaffold992 ScafM SNP 0018.scaffold00058 162411 1 T G scaffold992 ScafM SNP 0018.scaffold00058 162468 1 T C scaffold992 ScafM SNP 0018.scaffold00058 162499 1 A G scaffold992 ScafM SNP 0018.scaffold00058 162515 1 T C scaffold992 ScafM SNP 0018.scaffold00058 162520 1 G T scaffold992 ScafM SNP 0018.scaffold00058 162542 1 G T scaffold992 ScafM SNP 0018.scaffold00058 162547 1 A T scaffold992 ScafM SNP 0018.scaffold00058 162685 1 A C scaffold992 ScafM SNP 0018.scaffold00058 162710 2 TT AC scaffold992 ScafM SNP 0018.scaffold00058 162723 1 G T scaffold992 ScafM SNP 0018.scaffold00058 162740 1 G T scaffold992 ScafM SNP 0018.scaffold00058 162745 1 A C scaffold992 ScafM SNP 0018.scaffold00058 162762 1 T A scaffold992 ScafM SNP 0018.scaffold00058 162771 1 T A scaffold992 ScafM INDEL 0018.scaffold00058 162777 1 . A scaffold992 ScafM SNP 0018.scaffold00058 162780 1 C A scaffold992 ScafM SNP 0018.scaffold00058 162809 1 C T scaffold992 ReadM SNP 0018.scaffold00058 162982 1 C T - ReadM SNP 0018.scaffold00058 163021 1 G C - ScafM SNP 0018.scaffold00058 163115 1 T G scaffold992 ScafM SNP 0018.scaffold00058 163124 1 G T scaffold992 ScafM SNP 0018.scaffold00058 163141 1 C T scaffold992 ScafM SNP 0018.scaffold00058 163150 1 T C scaffold992 ScafM SNP 0018.scaffold00058 163160 1 A G scaffold992 ScafM SNP 0018.scaffold00058 163217 1 T A scaffold992 ScafM SNP 0018.scaffold00058 163220 1 G C scaffold992 ScafM SNP 0018.scaffold00058 163225 1 G C scaffold992 ReadM SNP 0018.scaffold00058 163388 1 G A - ReadM SNP 0018.scaffold00058 163477 1 A G - ReadM SNP 0018.scaffold00058 163507 1 T C - ReadM SNP 0018.scaffold00058 163533 1 C T - ScafM SNP 0018.scaffold00058 163568 1 A G scaffold992 ScafM SNP 0018.scaffold00058 163571 1 C T scaffold992 ScafM SNP 0018.scaffold00058 163584 1 T C scaffold992 ScafM SNP 0018.scaffold00058 163615 1 G A scaffold992 Both SNP 0018.scaffold00058 163629 1 T G scaffold992 Both SNP 0018.scaffold00058 163649 1 A T scaffold992 ReadM SNP 0018.scaffold00058 163862 1 T C - ReadM SNP 0018.scaffold00058 163887 1 C T - Both SNP 0018.scaffold00058 163972 1 C A scaffold992 Both SNP 0018.scaffold00058 164024 1 C A scaffold992 Both SNP 0018.scaffold00058 164052 1 G A scaffold992 Both SNP 0018.scaffold00058 164060 1 A C scaffold992 ReadM INDEL 0018.scaffold00058 164157 3 TTA ... - ScafM INDEL 0018.scaffold00058 164255 3 ... GGA scaffold992 ScafM SNP 0018.scaffold00058 164279 1 T C scaffold992 Both INDEL 0018.scaffold00058 164335 2 AA .. scaffold992 Both SNP 0018.scaffold00058 164359 1 T C scaffold992 Both SNP 0018.scaffold00058 164415 1 G A scaffold992 Both SNP 0018.scaffold00058 164426 1 C A scaffold992 Both SNP 0018.scaffold00058 164444 1 G T scaffold992 ScafM INDEL 0018.scaffold00058 164525 3 AAC ... scaffold992 Both SNP 0018.scaffold00058 164549 1 A T scaffold992 Both SNP 0018.scaffold00058 164650 1 G A scaffold992 Both SNP 0018.scaffold00058 164722 1 G A scaffold992 Both INDEL 0018.scaffold00058 164724 1 . G scaffold992 Both SNP 0018.scaffold00058 164763 1 T C scaffold992 ScafM SNP 0018.scaffold00058 164789 1 T C scaffold992 ScafM SNP 0018.scaffold00058 164800 1 T A scaffold992 ScafM SNP 0018.scaffold00058 164806 1 G A scaffold992 ScafM INDEL 0018.scaffold00058 164824 1 . C scaffold992 Both SNP 0018.scaffold00058 164870 1 A T scaffold992 Both SNP 0018.scaffold00058 164878 1 A T scaffold992 Both SNP 0018.scaffold00058 164901 1 T C scaffold992 Both SNP 0018.scaffold00058 164970 1 A C scaffold992 Both SNP 0018.scaffold00058 164985 1 G A scaffold992 ReadM SNP 0018.scaffold00058 165180 1 A T - ReadM SNP 0018.scaffold00058 165200 1 A G - ScafM SNP 0018.scaffold00058 165443 1 T C scaffold992 ScafM SNP 0018.scaffold00058 165471 1 A G scaffold992 ScafM SNP 0018.scaffold00058 165476 1 G A scaffold992 ScafM SNP 0018.scaffold00058 165478 1 T C scaffold992 ScafM SNP 0018.scaffold00058 165507 1 A G scaffold992 ReadM SNP 0018.scaffold00058 170550 1 A T - ReadM SNP 0018.scaffold00058 170581 1 G A - ReadM SNP 0018.scaffold00058 170583 1 G A - ReadM SNP 0018.scaffold00058 170653 1 G T - ReadM SNP 0018.scaffold00058 170692 1 C A - ReadM INDEL 0018.scaffold00058 170729 1 A . - ReadM SNP 0018.scaffold00058 170755 1 T C - ReadM SNP 0018.scaffold00058 170793 1 T C - ReadM SNP 0018.scaffold00058 170873 1 C A - ReadM SNP 0018.scaffold00058 170895 1 G A - ReadM SNP 0018.scaffold00058 170919 1 T G - ReadM SNP 0018.scaffold00058 171004 1 C A - ScafM SNP 0018.scaffold00058 171111 2 GT AC scaffold992 ScafM SNP 0018.scaffold00058 171143 2 CG TA scaffold992 Both SNP 0018.scaffold00058 171161 1 C T scaffold992 Both SNP 0018.scaffold00058 171181 1 A G scaffold992 ScafM SNP 0018.scaffold00058 171246 1 C T scaffold992 ScafM SNP 0018.scaffold00058 171256 1 T G scaffold992 ScafM SNP 0018.scaffold00058 171258 1 C T scaffold992 ScafM SNP 0018.scaffold00058 171274 1 A C scaffold992 ScafM SNP 0018.scaffold00058 171305 1 A T scaffold992 ScafM SNP 0018.scaffold00058 171309 1 G A scaffold992 ScafM SNP 0018.scaffold00058 171366 1 A G scaffold992 ScafM SNP 0018.scaffold00058 171368 1 G A scaffold992 ScafM SNP 0018.scaffold00058 171454 3 ATC GGT scaffold992 Both SNP 0018.scaffold00058 171477 1 G T scaffold992 Both SNP 0018.scaffold00058 171547 1 G A scaffold992 ScafM SNP 0018.scaffold00058 171589 1 T G scaffold992 ScafM INDEL 0018.scaffold00058 171599 4 TTTA .... scaffold992 Both SNP 0018.scaffold00058 171630 1 G T scaffold992 Both SNP 0018.scaffold00058 171692 1 T A scaffold992 Both SNP 0018.scaffold00058 171736 1 C A scaffold992 Both SNP 0018.scaffold00058 171754 1 T C scaffold992 Both SNP 0018.scaffold00058 171804 1 G C scaffold992 Both INDEL 0018.scaffold00058 171822 1 T . scaffold992 Both SNP 0018.scaffold00058 171850 1 T A scaffold992 Both SNP 0018.scaffold00058 171889 1 C T scaffold992 ScafM INDEL 0018.scaffold00058 171951 6 ...... ATCCTT scaffold992 ScafM SNP 0018.scaffold00058 171957 1 T C scaffold992 ScafM SNP 0018.scaffold00058 171971 1 C T scaffold992 Both SNP 0018.scaffold00058 172028 1 C T scaffold992 Both SNP 0018.scaffold00058 172037 1 T G scaffold992 Both SNP 0018.scaffold00058 172041 1 A G scaffold992 ScafM SNP 0018.scaffold00058 172102 1 T G scaffold992 ScafM SNP 0018.scaffold00058 172125 1 T C scaffold992 ScafM INDEL 0018.scaffold00058 172129 3 ... AAT scaffold992 ScafM SNP 0018.scaffold00058 172153 1 G T scaffold992 Both SNP 0018.scaffold00058 172199 1 T C scaffold992 Both SNP 0018.scaffold00058 172203 1 C T scaffold992 Both SNP 0018.scaffold00058 172221 1 A G scaffold992 ScafM SNP 0018.scaffold00058 172275 1 A C scaffold992 ScafM SNP 0018.scaffold00058 172279 1 G A scaffold992 ScafM SNP 0018.scaffold00058 172308 2 TG CA scaffold992 ScafM SNP 0018.scaffold00058 172319 1 C T scaffold992 Both SNP 0018.scaffold00058 172368 1 A C scaffold992 Both SNP 0018.scaffold00058 172375 1 A G scaffold992 Both SNP 0018.scaffold00058 172415 1 T C scaffold992 Both SNP 0018.scaffold00058 172477 1 T C scaffold992 Both SNP 0018.scaffold00058 172509 1 G A scaffold992 Both SNP 0018.scaffold00058 172558 1 T C scaffold992 Both SNP 0018.scaffold00058 172589 1 C T scaffold992 ScafM SNP 0018.scaffold00058 172636 1 C T scaffold992 ScafM SNP 0018.scaffold00058 172645 1 G A scaffold992 ScafM SNP 0018.scaffold00058 172656 1 G T scaffold992 ScafM INDEL 0018.scaffold00058 172666 3 ..A TTT scaffold992 ScafM SNP 0018.scaffold00058 172690 1 A G scaffold992 ScafM INDEL 0018.scaffold00058 172710 7 GTTTTTT ....... scaffold992 ScafM SNP 0018.scaffold00058 172721 1 T A scaffold992 ScafM SNP 0018.scaffold00058 172749 1 G C scaffold992 ScafM INDEL 0018.scaffold00058 172844 1 . A scaffold992 ScafM INDEL 0018.scaffold00058 172866 1 . T scaffold992 ScafM SNP 0018.scaffold00058 172880 1 G T scaffold992 Both SNP 0018.scaffold00058 172935 1 G T scaffold992 Both SNP 0018.scaffold00058 172954 1 G C scaffold992 ScafM SNP 0018.scaffold00058 173126 1 A T scaffold992 ScafM SNP 0018.scaffold00058 173165 1 A G scaffold992 ScafM SNP 0018.scaffold00058 173202 1 A T scaffold992 ScafM INDEL 0018.scaffold00058 173235 1 . A scaffold992 ScafM SNP 0018.scaffold00058 173256 1 T C scaffold992 ScafM SNP 0018.scaffold00058 173265 1 T C scaffold992 ScafM SNP 0018.scaffold00058 173411 1 A G scaffold992 ScafM SNP 0018.scaffold00058 173421 1 G A scaffold992 ScafM SNP 0018.scaffold00058 173451 1 G A scaffold992 ScafM SNP 0018.scaffold00058 173456 1 G C scaffold992 ScafM INDEL 0018.scaffold00058 173492 1 A . scaffold992 ScafM SNP 0018.scaffold00058 173494 1 T G scaffold992 ScafM SNP 0018.scaffold00058 173552 1 A T scaffold992 ScafM SNP 0018.scaffold00058 173631 1 T C scaffold6236 ScafM SNP 0018.scaffold00058 173641 2 GC AT scaffold6236 ScafM SNP 0018.scaffold00058 173665 1 T A scaffold6236 ScafM SNP 0018.scaffold00058 174053 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174077 1 T C scaffold6236 ScafM SNP 0018.scaffold00058 174088 1 A T scaffold6236 ScafM SNP 0018.scaffold00058 174122 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174146 1 G C scaffold6236 ScafM SNP 0018.scaffold00058 174229 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 174240 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 174244 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174275 1 T C scaffold6236 ScafM SNP 0018.scaffold00058 174293 1 C A scaffold6236 ScafM INDEL 0018.scaffold00058 174312 2 .. AA scaffold6236 ScafM SNP 0018.scaffold00058 174352 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174364 1 C G scaffold6236 ScafM SNP 0018.scaffold00058 174415 1 C G scaffold6236 ScafM SNP 0018.scaffold00058 174451 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174454 1 T A scaffold6236 ScafM SNP 0018.scaffold00058 174456 1 T A scaffold6236 ScafM INDEL 0018.scaffold00058 174458 7 TCCTTGT ....... scaffold6236 ScafM INDEL 0018.scaffold00058 174470 1 A . scaffold6236 ScafM SNP 0018.scaffold00058 174472 1 C T scaffold6236 ScafM INDEL 0018.scaffold00058 174474 1 C . scaffold6236 ScafM SNP 0018.scaffold00058 174529 1 T G scaffold6236 ScafM SNP 0018.scaffold00058 174549 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 174552 1 T C scaffold6236 ScafM SNP 0018.scaffold00058 174556 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174583 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 174606 1 T A scaffold6236 ScafM INDEL 0018.scaffold00058 174672 1 T . scaffold6236 ScafM SNP 0018.scaffold00058 174674 1 T A scaffold6236 ScafM SNP 0018.scaffold00058 175283 1 T C scaffold6236 ScafM SNP 0018.scaffold00058 175686 1 G T scaffold6236 ScafM INDEL 0018.scaffold00058 175695 10 .......... AGGATCGTAT scaffold6236 ScafM SNP 0018.scaffold00058 175723 1 A G scaffold6236 ScafM SNP 0018.scaffold00058 175767 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 175769 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 175803 1 C T scaffold6236 ScafM INDEL 0018.scaffold00058 175807 2 AC .. scaffold6236 ScafM SNP 0018.scaffold00058 175832 1 C A scaffold6236 ScafM SNP 0018.scaffold00058 175845 1 C G scaffold6236 ScafM SNP 0018.scaffold00058 175905 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 175916 1 A G scaffold6236 ScafM INDEL 0018.scaffold00058 176834 1 . T scaffold6236 ScafM SNP 0018.scaffold00058 176862 1 C A scaffold6236 ScafM SNP 0018.scaffold00058 177031 1 A C scaffold6236 ScafM SNP 0018.scaffold00058 177033 1 A C scaffold6236 ScafM SNP 0018.scaffold00058 177035 1 A C scaffold6236 Both SNP 0018.scaffold00058 177299 1 T C scaffold6236 Both SNP 0018.scaffold00058 177311 1 A T scaffold6236 Both SNP 0018.scaffold00058 177365 1 A G scaffold6236 Both SNP 0018.scaffold00058 177399 1 T A scaffold6236 Both SNP 0018.scaffold00058 177464 1 G C scaffold6236 Both SNP 0018.scaffold00058 177480 1 C A scaffold6236 Both SNP 0018.scaffold00058 177593 1 A C scaffold6236 Both SNP 0018.scaffold00058 177604 1 G T scaffold6236 Both SNP 0018.scaffold00058 177723 1 C T scaffold6236 ScafM SNP 0018.scaffold00058 177867 1 G A scaffold6236 ScafM SNP 0018.scaffold00058 178073 1 T A scaffold6236 Both SNP 0018.scaffold00058 178096 1 G A scaffold6236 ScafM INDEL 0018.scaffold00058 178156 7 GGGGGGA ....... scaffold6236 ScafM SNP 0018.scaffold00058 178171 1 T A scaffold6236 ScafM SNP 0018.scaffold00058 178173 1 G C scaffold6236 ScafM INDEL 0018.scaffold00058 178197 4 .... ATAT scaffold6236 ScafM SNP 0018.scaffold00058 178205 1 G A scaffold6236 Both SNP 0018.scaffold00058 178372 1 A C scaffold6236 Both SNP 0018.scaffold00058 178392 1 C T scaffold6236 Both SNP 0018.scaffold00058 178422 1 T G scaffold6236 Both SNP 0018.scaffold00058 178451 1 G C scaffold6236 ScafM SNP 0018.scaffold00058 178534 1 C A scaffold6236 ScafM SNP 0018.scaffold00058 178579 1 T A scaffold6236 ScafM SNP 0018.scaffold00058 182183 1 C A scaffold7209 ScafM SNP 0018.scaffold00058 182194 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182200 1 C T scaffold7209 ScafM INDEL 0018.scaffold00058 182208 1 . A scaffold7209 ScafM SNP 0018.scaffold00058 182231 2 TA CG scaffold7209 ScafM SNP 0018.scaffold00058 182240 1 T G scaffold7209 ScafM SNP 0018.scaffold00058 182245 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182258 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182264 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182267 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182297 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182301 4 ACCT TTAG scaffold7209 ScafM SNP 0018.scaffold00058 182306 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 182309 3 ATT CCC scaffold7209 ScafM SNP 0018.scaffold00058 182370 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182378 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 182390 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182394 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182417 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182422 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 182424 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182441 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182474 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182495 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 182499 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182501 1 C G scaffold7209 ScafM SNP 0018.scaffold00058 182503 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182507 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182509 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182516 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182525 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 182533 2 CG TA scaffold7209 ScafM SNP 0018.scaffold00058 182543 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 182552 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182554 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182556 1 C G scaffold7209 ScafM SNP 0018.scaffold00058 182561 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 182563 2 CC TG scaffold7209 ScafM SNP 0018.scaffold00058 182576 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182579 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182650 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182659 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182666 1 C A scaffold7209 ScafM SNP 0018.scaffold00058 182681 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 182684 2 TC GT scaffold7209 ScafM SNP 0018.scaffold00058 182696 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182720 1 C G scaffold7209 ScafM SNP 0018.scaffold00058 182722 2 TC GT scaffold7209 ScafM SNP 0018.scaffold00058 182737 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182744 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 182752 3 CAA TGG scaffold7209 ScafM SNP 0018.scaffold00058 182761 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182763 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182767 2 TG AT scaffold7209 ScafM SNP 0018.scaffold00058 182774 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182780 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182782 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182787 4 ATGT GCCC scaffold7209 ScafM SNP 0018.scaffold00058 182801 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182804 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182814 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182816 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182825 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 182832 2 CC TT scaffold7209 ScafM SNP 0018.scaffold00058 182836 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182840 1 T A scaffold7209 ScafM INDEL 0018.scaffold00058 182848 24 TAGTACTGTTGCCTCTGCCTCCAA ........................ scaffold7209 ScafM SNP 0018.scaffold00058 182876 1 T G scaffold7209 ScafM SNP 0018.scaffold00058 182894 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182911 2 TC CT scaffold7209 ScafM SNP 0018.scaffold00058 182914 2 TC CT scaffold7209 ScafM SNP 0018.scaffold00058 182924 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182927 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182936 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182942 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 182954 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 182957 1 C A scaffold7209 ScafM SNP 0018.scaffold00058 182960 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 182963 1 C A scaffold7209 ScafM SNP 0018.scaffold00058 182981 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 182984 1 A T scaffold7209 ScafM SNP 0018.scaffold00058 182987 1 A T scaffold7209 ScafM SNP 0018.scaffold00058 183011 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183013 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183022 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183024 1 C A scaffold7209 ScafM SNP 0018.scaffold00058 183029 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183033 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183046 2 GA TG scaffold7209 ScafM SNP 0018.scaffold00058 183056 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183063 1 C G scaffold7209 ScafM SNP 0018.scaffold00058 183065 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183076 2 GT TC scaffold7209 ScafM SNP 0018.scaffold00058 183094 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183103 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183110 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183121 2 GA AG scaffold7209 ScafM SNP 0018.scaffold00058 183137 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183163 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183182 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 183188 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183200 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183203 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183245 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183251 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183254 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183272 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183281 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183286 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183290 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 183307 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183311 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183338 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183347 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183353 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183356 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183358 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 183368 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183377 2 TG CA scaffold7209 ScafM SNP 0018.scaffold00058 183383 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 183386 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183403 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183413 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183422 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183434 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183439 2 CG TA scaffold7209 ScafM SNP 0018.scaffold00058 183446 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183452 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183461 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 183470 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183475 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183482 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183491 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183506 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183551 1 G C scaffold7209 ScafM SNP 0018.scaffold00058 183559 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183593 1 C G scaffold7209 ScafM SNP 0018.scaffold00058 183611 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 183614 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183620 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183626 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183637 1 T C scaffold7209 ScafM SNP 0018.scaffold00058 183654 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183662 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183665 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183677 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183681 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 183698 1 A C scaffold7209 ScafM SNP 0018.scaffold00058 183700 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183731 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183753 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183767 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183773 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183793 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183800 1 C T scaffold7209 ScafM SNP 0018.scaffold00058 183814 1 A G scaffold7209 ScafM SNP 0018.scaffold00058 183817 1 G T scaffold7209 ScafM SNP 0018.scaffold00058 183821 1 T C scaffold7209 ScafM INDEL 0018.scaffold00058 183824 1 A . scaffold7209 ScafM INDEL 0018.scaffold00058 183831 4 TGTG .... scaffold7209 ScafM SNP 0018.scaffold00058 183838 1 T C scaffold7209 ScafM INDEL 0018.scaffold00058 183842 2 AT .. scaffold7209 ScafM INDEL 0018.scaffold00058 183849 1 A . scaffold7209 ScafM SNP 0018.scaffold00058 183852 1 T A scaffold7209 ScafM SNP 0018.scaffold00058 183855 3 CAT TTA scaffold7209 ScafM SNP 0018.scaffold00058 183886 1 G A scaffold7209 ScafM SNP 0018.scaffold00058 183891 1 G C scaffold7209 ScafM INDEL 0018.scaffold00058 183893 2 AG .. scaffold7209 ScafM SNP 0018.scaffold00058 183901 1 A G scaffold7209 ScafM INDEL 0018.scaffold00058 183907 1 . A scaffold7209 ScafM INDEL 0018.scaffold00058 183921 1 . T scaffold7209 ScafM SNP 0018.scaffold00058 188869 1 A C scaffold13349 ScafM INDEL 0018.scaffold00058 188871 1 C . scaffold13349 ScafM INDEL 0018.scaffold00058 188873 1 C . scaffold13349 ScafM SNP 0018.scaffold00058 188875 1 C T scaffold13349 ScafM SNP 0018.scaffold00058 191436 1 C G scaffold13349 Both SNP 0018.scaffold00058 191833 1 A T scaffold13349 Both SNP 0018.scaffold00058 192007 1 T C scaffold13349 Both SNP 0018.scaffold00058 192121 1 T C scaffold13349 Both SNP 0018.scaffold00058 192201 1 A G scaffold13349 ScafM INDEL 0018.scaffold00058 192348 50 .................................................. TTTAGGTATCACACTCATCACATACTAATTAATTTACAAAAGAGATAATG scaffold13349 ReadM SNP 0018.scaffold00058 192424 1 T C - ReadM INDEL 0018.scaffold00058 192536 1 T . - ReadM SNP 0018.scaffold00058 192565 1 A G - Both SNP 0018.scaffold00058 192679 1 A G scaffold13349 Both SNP 0018.scaffold00058 192809 1 G T scaffold13349 Both SNP 0018.scaffold00058 192819 1 C T scaffold13349 ReadM SNP 0018.scaffold00058 192870 1 T C - ReadM SNP 0018.scaffold00058 192877 1 C A - ReadM SNP 0018.scaffold00058 192943 1 A T - ReadM SNP 0018.scaffold00058 193000 1 T C - ReadM SNP 0018.scaffold00058 193058 1 A T - ReadM SNP 0018.scaffold00058 193115 1 T C - ReadM SNP 0018.scaffold00058 193148 1 G A - ReadM SNP 0018.scaffold00058 193154 1 G A - ReadM SNP 0018.scaffold00058 193201 1 T C - ReadM SNP 0018.scaffold00058 193220 1 T C - ReadM SNP 0018.scaffold00058 193261 1 C T - ReadM SNP 0018.scaffold00058 193310 1 A C - ReadM SNP 0018.scaffold00058 193339 1 A C - ReadM SNP 0018.scaffold00058 193463 1 C T - ReadM SNP 0018.scaffold00058 193585 1 G T - ReadM SNP 0018.scaffold00058 193653 1 T A - ReadM SNP 0018.scaffold00058 193854 1 T C - ReadM SNP 0018.scaffold00058 193872 1 C T - ReadM SNP 0018.scaffold00058 193943 1 G T - ReadM SNP 0018.scaffold00058 193964 1 C T - ReadM SNP 0018.scaffold00058 194315 1 A G - ReadM SNP 0018.scaffold00058 194450 1 A T - ReadM SNP 0018.scaffold00058 194536 1 C A - ReadM INDEL 0018.scaffold00058 194599 1 G . - ReadM SNP 0018.scaffold00058 194618 1 T G - ReadM SNP 0018.scaffold00058 194692 1 A G - ReadM SNP 0018.scaffold00058 194713 1 G A - ReadM SNP 0018.scaffold00058 194742 1 G T - ReadM SNP 0018.scaffold00058 194814 1 T G - ReadM SNP 0018.scaffold00058 194863 1 C T - ReadM SNP 0018.scaffold00058 195114 1 G C - ReadM SNP 0018.scaffold00058 195202 1 T C - ReadM SNP 0018.scaffold00058 195258 1 A T - ReadM SNP 0018.scaffold00058 195261 1 G A - ReadM SNP 0018.scaffold00058 195273 1 C A - ReadM SNP 0018.scaffold00058 195401 2 CA TG - ReadM SNP 0018.scaffold00058 195443 1 T G - ReadM SNP 0018.scaffold00058 195501 1 C T - ReadM INDEL 0018.scaffold00058 195516 1 T . - ReadM SNP 0018.scaffold00058 195610 1 G A - ReadM SNP 0018.scaffold00058 195744 1 G A - ReadM SNP 0018.scaffold00058 195753 1 A C - ReadM SNP 0018.scaffold00058 195773 1 G C - ReadM SNP 0018.scaffold00058 195830 1 G T - ReadM SNP 0018.scaffold00058 195898 1 T C - ReadM SNP 0018.scaffold00058 195901 1 A C - ReadM SNP 0018.scaffold00058 196066 1 G A - ReadM SNP 0018.scaffold00058 196081 1 A G - ReadM SNP 0018.scaffold00058 196149 1 T C - ReadM SNP 0018.scaffold00058 196200 1 C T - ReadM SNP 0018.scaffold00058 196242 1 C G - ReadM INDEL 0018.scaffold00058 196364 1 . T - ReadM SNP 0018.scaffold00058 196477 1 T C - ReadM SNP 0018.scaffold00058 196552 1 G A - ReadM SNP 0018.scaffold00058 196740 1 C T - ReadM SNP 0018.scaffold00058 196761 1 A G - ReadM SNP 0018.scaffold00058 196873 1 A T - ReadM SNP 0018.scaffold00058 196880 1 A T - ReadM SNP 0018.scaffold00058 196919 1 A G - ReadM SNP 0018.scaffold00058 197049 1 C T - ReadM SNP 0018.scaffold00058 197132 1 A T - ReadM SNP 0018.scaffold00058 197252 1 C G - ReadM SNP 0018.scaffold00058 197267 1 C T - ReadM SNP 0018.scaffold00058 197338 1 G T - ReadM INDEL 0018.scaffold00058 197347 2 TT .. - ReadM SNP 0018.scaffold00058 197693 1 A C - ReadM SNP 0018.scaffold00058 197774 1 C A - ReadM SNP 0018.scaffold00058 197778 1 C T - ReadM SNP 0018.scaffold00058 197831 1 G A - ReadM SNP 0018.scaffold00058 197948 1 C T - ReadM SNP 0018.scaffold00058 197951 1 C T - ReadM SNP 0018.scaffold00058 198036 1 A T - ReadM SNP 0018.scaffold00058 198074 1 T C - ReadM SNP 0018.scaffold00058 198267 1 T C - ReadM SNP 0018.scaffold00058 198295 1 A G - ReadM SNP 0018.scaffold00058 198393 1 G T - ReadM SNP 0018.scaffold00058 198447 1 T C - ReadM SNP 0018.scaffold00058 198491 1 G A - ReadM SNP 0018.scaffold00058 198548 1 G A - ReadM SNP 0018.scaffold00058 198590 1 A G - ReadM SNP 0018.scaffold00058 198694 1 C T - ReadM SNP 0018.scaffold00058 198701 1 G A - ReadM SNP 0018.scaffold00058 198754 1 C A - ReadM SNP 0018.scaffold00058 198836 1 T G - ReadM SNP 0018.scaffold00058 198850 1 G A - ReadM SNP 0018.scaffold00058 198903 1 T C - ReadM SNP 0018.scaffold00058 199022 1 C G - ReadM SNP 0018.scaffold00058 199138 1 G A - ReadM SNP 0018.scaffold00058 199154 1 G A - ReadM SNP 0018.scaffold00058 199211 1 A G - ReadM INDEL 0019.scaffold00065 60422 1 . A - ReadM INDEL 0019.scaffold00065 60423 1 . T - ScafM SNP 0020.scaffold00069 2964 1 A G scaffold2124 ScafM SNP 0020.scaffold00069 5967 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 6048 1 T C scaffold2124 Both SNP 0020.scaffold00069 7155 1 A C scaffold2124 ReadM SNP 0020.scaffold00069 13771 1 G C - ReadM SNP 0020.scaffold00069 13781 1 T C - ReadM INDEL 0020.scaffold00069 13892 1 . A - ReadM SNP 0020.scaffold00069 13934 1 C A - Both SNP 0020.scaffold00069 13981 1 A C scaffold2124 Both SNP 0020.scaffold00069 14101 1 T C scaffold2124 Both SNP 0020.scaffold00069 14126 1 A G scaffold2124 ScafM INDEL 0020.scaffold00069 14142 3 GAA ... scaffold2124 ScafM SNP 0020.scaffold00069 14243 1 A T scaffold2124 ScafM SNP 0020.scaffold00069 14276 1 G A scaffold2124 ScafM INDEL 0020.scaffold00069 14301 3 CGA ... scaffold2124 ScafM SNP 0020.scaffold00069 14315 1 A G scaffold2124 Both SNP 0020.scaffold00069 14419 1 T A scaffold2124 ScafM SNP 0020.scaffold00069 14457 1 G A scaffold2124 ScafM INDEL 0020.scaffold00069 14469 2 TT .. scaffold2124 ScafM SNP 0020.scaffold00069 14473 5 TTTTT AAAAA scaffold2124 ScafM SNP 0020.scaffold00069 14494 1 T C scaffold2124 ScafM INDEL 0020.scaffold00069 14532 2 .T AA scaffold2124 ScafM SNP 0020.scaffold00069 14541 1 C T scaffold2124 ScafM SNP 0020.scaffold00069 14547 1 A G scaffold2124 ReadM SNP 0020.scaffold00069 14671 1 C A - ReadM SNP 0020.scaffold00069 14757 1 G A - ReadM SNP 0020.scaffold00069 14815 1 G A - ReadM SNP 0020.scaffold00069 14827 1 G T - ReadM SNP 0020.scaffold00069 14924 1 G T - ReadM SNP 0020.scaffold00069 15212 1 A C - ReadM SNP 0020.scaffold00069 15218 1 G A - ReadM SNP 0020.scaffold00069 15259 1 C A - ReadM SNP 0020.scaffold00069 15374 1 C T - ReadM SNP 0020.scaffold00069 15401 1 C G - ReadM SNP 0020.scaffold00069 15404 1 G A - ReadM SNP 0020.scaffold00069 15493 1 C G - ReadM SNP 0020.scaffold00069 15507 1 C A - ReadM SNP 0020.scaffold00069 15538 1 G T - ReadM SNP 0020.scaffold00069 15638 1 A G - Both SNP 0020.scaffold00069 15751 1 A T scaffold2124 ScafM INDEL 0020.scaffold00069 15793 16 ATTTCAAATTATGACT ................ scaffold2124 Both SNP 0020.scaffold00069 15876 1 A G scaffold2124 Both INDEL 0020.scaffold00069 15898 1 . C scaffold2124 Both SNP 0020.scaffold00069 15952 1 A G scaffold2124 ReadM SNP 0020.scaffold00069 16053 1 C G - ReadM SNP 0020.scaffold00069 16141 1 T C - ReadM INDEL 0020.scaffold00069 16236 1 . A - ReadM SNP 0020.scaffold00069 16446 1 T C - ReadM SNP 0020.scaffold00069 16549 1 C A - ReadM SNP 0020.scaffold00069 16630 1 A G - ReadM SNP 0020.scaffold00069 16653 1 G A - ReadM SNP 0020.scaffold00069 16667 1 A G - ReadM SNP 0020.scaffold00069 16713 1 A G - ReadM SNP 0020.scaffold00069 16750 1 C T - ReadM SNP 0020.scaffold00069 16778 1 C T - ReadM SNP 0020.scaffold00069 16821 1 C T - ScafM INDEL 0020.scaffold00069 17025 3 ... TAC scaffold2124 ScafM INDEL 0020.scaffold00069 17135 4 .... GTGG scaffold2124 ScafM SNP 0020.scaffold00069 17137 1 A T scaffold2124 ScafM INDEL 0020.scaffold00069 17142 2 GT .. scaffold2124 Both INDEL 0020.scaffold00069 17285 1 . T scaffold2124 ReadM SNP 0020.scaffold00069 17375 1 T C - ReadM SNP 0020.scaffold00069 17646 1 T G - ReadM INDEL 0020.scaffold00069 17664 1 T . - ReadM SNP 0020.scaffold00069 18264 1 C A - ScafM INDEL 0020.scaffold00069 20002 10 CTCCCCCCCC .......... scaffold2124 ScafM INDEL 0020.scaffold00069 20016 1 A . scaffold2124 ScafM INDEL 0020.scaffold00069 20044 2 CC .. scaffold2124 ScafM INDEL 0020.scaffold00069 20047 2 CC .. scaffold2124 Both SNP 0020.scaffold00069 20158 1 A G scaffold2124 ScafM INDEL 0020.scaffold00069 20424 1 A . scaffold2124 ReadM INDEL 0020.scaffold00069 20509 1 C . - ScafM INDEL 0020.scaffold00069 20509 2 CC .T scaffold2124 Both SNP 0020.scaffold00069 20538 1 A G scaffold2124 Both SNP 0020.scaffold00069 20678 1 G A scaffold2124 ReadM SNP 0020.scaffold00069 20789 1 A G - ReadM SNP 0020.scaffold00069 20841 1 T A - Both INDEL 0020.scaffold00069 20969 2 TC .. scaffold2124 ScafM SNP 0020.scaffold00069 21019 1 T G scaffold2124 ScafM SNP 0020.scaffold00069 21033 1 C T scaffold2124 Both SNP 0020.scaffold00069 21062 1 T A scaffold2124 Both SNP 0020.scaffold00069 21066 1 T C scaffold2124 ScafM INDEL 0020.scaffold00069 21234 6 ATCGTG ...... scaffold2124 ScafM SNP 0020.scaffold00069 21265 1 C T scaffold2124 Both SNP 0020.scaffold00069 21298 1 T C scaffold2124 Both SNP 0020.scaffold00069 21337 1 G C scaffold2124 Both SNP 0020.scaffold00069 21341 1 G A scaffold2124 ScafM INDEL 0020.scaffold00069 21580 3 ... TCT scaffold2124 ScafM SNP 0020.scaffold00069 21619 1 T C scaffold2124 ScafM SNP 0020.scaffold00069 21667 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 21674 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 21685 1 G T scaffold2124 ScafM SNP 0020.scaffold00069 21688 1 A G scaffold2124 ScafM SNP 0020.scaffold00069 21697 1 C T scaffold2124 Both SNP 0020.scaffold00069 21759 1 C G scaffold2124 Both SNP 0020.scaffold00069 21990 1 T C scaffold2124 Both SNP 0020.scaffold00069 22016 1 G A scaffold2124 Both SNP 0020.scaffold00069 22150 1 C T scaffold2124 Both SNP 0020.scaffold00069 22326 1 A T scaffold2124 Both SNP 0020.scaffold00069 22363 1 T C scaffold2124 ScafM INDEL 0020.scaffold00069 22462 7 ....... CCAATGG scaffold2124 Both INDEL 0020.scaffold00069 22532 1 T . scaffold2124 Both INDEL 0020.scaffold00069 22683 1 T . scaffold2124 ScafM SNP 0020.scaffold00069 22685 1 C A scaffold2124 ScafM SNP 0020.scaffold00069 23873 1 A T scaffold2124 ScafM SNP 0020.scaffold00069 23931 2 TT AA scaffold2124 ScafM SNP 0020.scaffold00069 23939 1 G C scaffold2124 ScafM SNP 0020.scaffold00069 23948 1 C A scaffold2124 ScafM INDEL 0020.scaffold00069 23956 2 AA .. scaffold2124 Both SNP 0020.scaffold00069 24032 1 T C scaffold2124 Both SNP 0020.scaffold00069 24035 1 A C scaffold2124 Both SNP 0020.scaffold00069 24116 1 A C scaffold2124 ScafM SNP 0020.scaffold00069 24137 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 24141 1 T G scaffold2124 ScafM SNP 0020.scaffold00069 24152 1 T C scaffold2124 ScafM SNP 0020.scaffold00069 24215 1 T G scaffold2124 Both SNP 0020.scaffold00069 24338 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 24349 1 C T scaffold2124 ScafM INDEL 0020.scaffold00069 24366 5 TCGAG ..... scaffold2124 ScafM INDEL 0020.scaffold00069 24374 4 ATTA .... scaffold2124 ScafM SNP 0020.scaffold00069 24389 1 G T scaffold2124 ScafM SNP 0020.scaffold00069 24407 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 24410 1 G T scaffold2124 ScafM SNP 0020.scaffold00069 24484 1 C T scaffold2124 ScafM SNP 0020.scaffold00069 24505 1 T G scaffold2124 ScafM SNP 0020.scaffold00069 24508 1 G C scaffold2124 ScafM SNP 0020.scaffold00069 24522 2 TC CT scaffold2124 ScafM SNP 0020.scaffold00069 24535 1 G A scaffold2124 ScafM SNP 0020.scaffold00069 24561 1 T C scaffold2124 ScafM SNP 0020.scaffold00069 24568 1 C T scaffold2124 ScafM INDEL 0020.scaffold00069 24571 2 .. AG scaffold2124 ScafM INDEL 0020.scaffold00069 24572 2 .A TT scaffold2124 ScafM INDEL 0020.scaffold00069 24576 5 ..... TTTGG scaffold2124 ScafM INDEL 0020.scaffold00069 24599 3 ... ATG scaffold2124 ScafM INDEL 0020.scaffold00069 24615 1 . G scaffold2124 ScafM SNP 0020.scaffold00069 24675 1 G T scaffold2124 ScafM INDEL 0020.scaffold00069 24689 5 CTTGA ..... scaffold2124 ScafM SNP 0020.scaffold00069 24696 1 C A scaffold2124 ScafM SNP 0020.scaffold00069 24702 1 A G scaffold2124 ScafM SNP 0020.scaffold00069 24760 1 A T scaffold2124 ScafM SNP 0020.scaffold00069 24763 1 C T scaffold2124 ScafM INDEL 0020.scaffold00069 24772 8 TGCATGAT ........ scaffold2124 ScafM SNP 0020.scaffold00069 24819 2 CG TT scaffold2124 ScafM SNP 0020.scaffold00069 24831 1 C T scaffold2124 ScafM INDEL 0020.scaffold00069 24880 2 GG .A scaffold2124 ScafM SNP 0020.scaffold00069 24894 1 A G scaffold2124 ScafM SNP 0020.scaffold00069 24898 1 C T scaffold2124 ScafM INDEL 0020.scaffold00069 28578 3 TGA ... scaffold10307 ScafM SNP 0020.scaffold00069 28804 1 A C scaffold10307 ScafM INDEL 0020.scaffold00069 28816 1 . G scaffold10307 ScafM SNP 0020.scaffold00069 28923 1 G A scaffold10307 ScafM SNP 0020.scaffold00069 28962 1 A G scaffold10307 ScafM SNP 0020.scaffold00069 28978 1 G T scaffold10307 ScafM INDEL 0020.scaffold00069 30795 1 . C scaffold26703 ScafM INDEL 0020.scaffold00069 30796 1 . T scaffold26703 ScafM INDEL 0020.scaffold00069 30806 1 T . scaffold26703 ScafM SNP 0020.scaffold00069 30857 1 C A scaffold26703 ScafM INDEL 0020.scaffold00069 30902 5 ATATA ..... scaffold26703 ScafM INDEL 0020.scaffold00069 30932 1 A . scaffold26703 ScafM SNP 0020.scaffold00069 30986 1 C G scaffold26703 ScafM SNP 0020.scaffold00069 31001 1 G T scaffold26703 ScafM SNP 0020.scaffold00069 31007 1 A T scaffold26703 ScafM SNP 0020.scaffold00069 31012 2 CC TT scaffold26703 ScafM SNP 0020.scaffold00069 31019 1 G A scaffold26703 ScafM INDEL 0020.scaffold00069 31023 1 A . scaffold26703 ScafM SNP 0020.scaffold00069 31029 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 31817 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 31819 1 A C scaffold26703 ScafM SNP 0020.scaffold00069 31831 1 T A scaffold26703 ScafM SNP 0020.scaffold00069 31846 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 31856 1 T G scaffold26703 ScafM SNP 0020.scaffold00069 31869 1 G A scaffold26703 ScafM INDEL 0020.scaffold00069 31902 3 ... ATT scaffold26703 ScafM SNP 0020.scaffold00069 31904 1 A C scaffold26703 ScafM INDEL 0020.scaffold00069 31905 1 . A scaffold26703 ScafM INDEL 0020.scaffold00069 31907 1 . G scaffold26703 Both SNP 0020.scaffold00069 32018 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 32090 1 T C scaffold26703 ScafM INDEL 0020.scaffold00069 32098 3 AAT ... scaffold26703 ScafM INDEL 0020.scaffold00069 32198 10 ACCAACTCAT .......... scaffold26703 ScafM SNP 0020.scaffold00069 32242 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 32252 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 32255 1 G T scaffold26703 Both SNP 0020.scaffold00069 32304 1 C T scaffold26703 Both SNP 0020.scaffold00069 32338 1 G A scaffold26703 Both SNP 0020.scaffold00069 32360 1 G A scaffold26703 Both SNP 0020.scaffold00069 32396 1 A C scaffold26703 ScafM SNP 0020.scaffold00069 32418 1 T C scaffold26703 ScafM INDEL 0020.scaffold00069 32440 6 CAACAA ...... scaffold26703 Both SNP 0020.scaffold00069 32479 1 A G scaffold26703 Both SNP 0020.scaffold00069 32599 1 T A scaffold26703 Both SNP 0020.scaffold00069 32698 1 T C scaffold26703 ScafM INDEL 0020.scaffold00069 32788 3 ... TAA scaffold26703 ScafM SNP 0020.scaffold00069 32798 1 A T scaffold26703 ScafM SNP 0020.scaffold00069 32802 1 T G scaffold26703 ScafM SNP 0020.scaffold00069 32863 1 T G scaffold26703 ScafM SNP 0020.scaffold00069 32887 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 32942 1 G C scaffold26703 ScafM INDEL 0020.scaffold00069 32994 1 . T scaffold26703 ScafM SNP 0020.scaffold00069 32996 1 A T scaffold26703 ScafM INDEL 0020.scaffold00069 33055 4 TATA .... scaffold26703 ScafM SNP 0020.scaffold00069 33084 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 33091 1 T A scaffold26703 ScafM SNP 0020.scaffold00069 33103 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 33126 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 33129 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 33151 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 34114 1 T A scaffold26703 ScafM INDEL 0020.scaffold00069 34116 1 T . scaffold26703 ScafM INDEL 0020.scaffold00069 34136 1 C . scaffold26703 ScafM SNP 0020.scaffold00069 34148 1 A G scaffold26703 ScafM SNP 0020.scaffold00069 34152 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 34227 1 C T scaffold26703 ScafM SNP 0020.scaffold00069 34232 1 G T scaffold26703 ScafM SNP 0020.scaffold00069 34245 1 A C scaffold26703 ScafM SNP 0020.scaffold00069 34281 1 G T scaffold26703 ScafM INDEL 0020.scaffold00069 34307 1 A . scaffold26703 ScafM INDEL 0020.scaffold00069 34312 1 A . scaffold26703 ScafM INDEL 0020.scaffold00069 34314 2 AT .C scaffold26703 ScafM SNP 0020.scaffold00069 34335 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 34342 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 34348 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 34350 1 G T scaffold26703 ScafM SNP 0020.scaffold00069 34388 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 34403 1 A G scaffold26703 ScafM SNP 0020.scaffold00069 34416 1 T C scaffold26703 ScafM SNP 0020.scaffold00069 34468 1 G A scaffold26703 ScafM SNP 0020.scaffold00069 34960 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 35001 1 C A scaffold8872 Both SNP 0020.scaffold00069 35142 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 35208 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 35238 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 35251 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 35267 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 35330 1 A T scaffold8872 Both SNP 0020.scaffold00069 35372 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 35415 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 35440 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 35507 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 35515 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 35545 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 35553 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 35557 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 35559 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 35563 2 GG TC scaffold8872 ScafM SNP 0020.scaffold00069 35568 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 35587 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 35598 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 35620 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 35660 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 35662 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 35676 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 36062 7 ATTAGAA ....... scaffold8872 ScafM SNP 0020.scaffold00069 36195 1 T G scaffold8872 Both SNP 0020.scaffold00069 36337 1 C A scaffold8872 Both SNP 0020.scaffold00069 36562 1 C T scaffold8872 Both INDEL 0020.scaffold00069 36607 2 .. TG scaffold8872 Both INDEL 0020.scaffold00069 36631 1 . T scaffold8872 Both SNP 0020.scaffold00069 36993 1 C A scaffold8872 Both SNP 0020.scaffold00069 37049 1 T C scaffold8872 Both SNP 0020.scaffold00069 37265 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 37438 1 T A scaffold8872 Both SNP 0020.scaffold00069 38245 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 38564 1 . T scaffold8872 Both SNP 0020.scaffold00069 38590 1 A T scaffold8872 Both INDEL 0020.scaffold00069 38871 1 . T scaffold8872 ReadM INDEL 0020.scaffold00069 39437 1 A . - Both INDEL 0020.scaffold00069 39438 2 AT .. scaffold8872 Both SNP 0020.scaffold00069 39459 1 A T scaffold8872 Both SNP 0020.scaffold00069 39515 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 39850 1 T C - ReadM SNP 0020.scaffold00069 39861 1 T G - ReadM INDEL 0020.scaffold00069 39949 1 G . - ReadM SNP 0020.scaffold00069 40369 1 T G - Both SNP 0020.scaffold00069 40847 1 A T scaffold8872 Both SNP 0020.scaffold00069 40959 1 T C scaffold8872 Both SNP 0020.scaffold00069 41143 1 G C scaffold8872 Both SNP 0020.scaffold00069 41183 1 A G scaffold8872 Both SNP 0020.scaffold00069 41224 1 T C scaffold8872 Both SNP 0020.scaffold00069 41276 1 T G scaffold8872 Both SNP 0020.scaffold00069 41294 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 41448 1 T C - ScafM SNP 0020.scaffold00069 41663 1 A G scaffold8872 Both INDEL 0020.scaffold00069 41680 1 T . scaffold8872 Both SNP 0020.scaffold00069 41761 1 G T scaffold8872 Both SNP 0020.scaffold00069 41863 1 G A scaffold8872 Both SNP 0020.scaffold00069 42326 1 C T scaffold8872 Both SNP 0020.scaffold00069 42437 1 A C scaffold8872 Both SNP 0020.scaffold00069 42602 1 T G scaffold8872 Both SNP 0020.scaffold00069 42869 1 T C scaffold8872 ReadM SNP 0020.scaffold00069 43412 1 T A - ScafM INDEL 0020.scaffold00069 43823 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 43864 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 43889 2 .. TT scaffold8872 ScafM SNP 0020.scaffold00069 44030 1 G A scaffold8872 Both INDEL 0020.scaffold00069 44319 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 44323 1 G T scaffold8872 Both SNP 0020.scaffold00069 44447 1 A G scaffold8872 Both SNP 0020.scaffold00069 44630 1 A G scaffold8872 Both INDEL 0020.scaffold00069 44836 2 .. TA scaffold8872 ScafM INDEL 0020.scaffold00069 44954 8 ........ GTGTGTGT scaffold8872 Both SNP 0020.scaffold00069 45075 1 T C scaffold8872 Both SNP 0020.scaffold00069 45097 1 T G scaffold8872 Both SNP 0020.scaffold00069 45434 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 45620 7 ....... TGTTTTG scaffold8872 Both SNP 0020.scaffold00069 46114 1 T A scaffold8872 Both SNP 0020.scaffold00069 46414 1 G C scaffold8872 Both SNP 0020.scaffold00069 46590 1 C G scaffold8872 Both INDEL 0020.scaffold00069 46766 1 . G scaffold8872 ScafM SNP 0020.scaffold00069 46768 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 46773 1 G T scaffold8872 Both SNP 0020.scaffold00069 46899 1 A T scaffold8872 Both SNP 0020.scaffold00069 47239 1 C A scaffold8872 Both SNP 0020.scaffold00069 47438 1 G A scaffold8872 Both SNP 0020.scaffold00069 47652 1 C T scaffold8872 Both SNP 0020.scaffold00069 47789 1 A G scaffold8872 ReadM SNP 0020.scaffold00069 48155 1 C T - ReadM SNP 0020.scaffold00069 48224 1 C A - ReadM SNP 0020.scaffold00069 48243 1 T C - ReadM INDEL 0020.scaffold00069 48252 1 . A - Both SNP 0020.scaffold00069 48530 1 A G scaffold8872 Both SNP 0020.scaffold00069 48842 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 48965 2 GT AA scaffold8872 ReadM SNP 0020.scaffold00069 48998 1 T C - ReadM SNP 0020.scaffold00069 49026 1 G A - ScafM SNP 0020.scaffold00069 49415 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 49693 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 49715 44 ............................................ TGTGAATTTGTGATGCATTGCATATTTGTGTGCTGAATATGAAT scaffold8872 Both SNP 0020.scaffold00069 49795 1 C T scaffold8872 Both SNP 0020.scaffold00069 49979 1 T C scaffold8872 Both SNP 0020.scaffold00069 50043 1 T C scaffold8872 Both INDEL 0020.scaffold00069 50096 1 . T scaffold8872 Both SNP 0020.scaffold00069 50253 1 T C scaffold8872 Both SNP 0020.scaffold00069 50453 1 A C scaffold8872 Both SNP 0020.scaffold00069 50462 1 T C scaffold8872 Both SNP 0020.scaffold00069 50478 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 50513 1 A . scaffold8872 Both SNP 0020.scaffold00069 50650 1 A G scaffold8872 Both INDEL 0020.scaffold00069 50709 2 AC .. scaffold8872 Both INDEL 0020.scaffold00069 50965 1 A . scaffold8872 Both SNP 0020.scaffold00069 50999 1 A G scaffold8872 ReadM SNP 0020.scaffold00069 51165 1 T G - Both SNP 0020.scaffold00069 51296 1 G T scaffold8872 Both SNP 0020.scaffold00069 51890 1 T C scaffold8872 Both SNP 0020.scaffold00069 52047 1 T C scaffold8872 Both SNP 0020.scaffold00069 52066 1 T G scaffold8872 Both SNP 0020.scaffold00069 52218 1 A C scaffold8872 Both SNP 0020.scaffold00069 52342 1 A G scaffold8872 Both SNP 0020.scaffold00069 52393 1 A G scaffold8872 Both SNP 0020.scaffold00069 52479 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 52542 1 . A scaffold8872 Both SNP 0020.scaffold00069 52592 1 A T scaffold8872 Both SNP 0020.scaffold00069 52671 1 G A scaffold8872 Both SNP 0020.scaffold00069 53157 1 G A scaffold8872 Both SNP 0020.scaffold00069 53260 1 A G scaffold8872 Both SNP 0020.scaffold00069 53345 1 A G scaffold8872 Both SNP 0020.scaffold00069 53410 1 C A scaffold8872 Both SNP 0020.scaffold00069 53683 1 A G scaffold8872 Both SNP 0020.scaffold00069 53964 1 T A scaffold8872 Both SNP 0020.scaffold00069 54038 1 T A scaffold8872 Both SNP 0020.scaffold00069 54509 1 A C scaffold8872 Both SNP 0020.scaffold00069 54565 1 G C scaffold8872 ReadM SNP 0020.scaffold00069 54720 1 A T - ReadM SNP 0020.scaffold00069 54768 1 T C - ReadM SNP 0020.scaffold00069 54784 1 A G - ReadM SNP 0020.scaffold00069 55410 1 T C - ReadM SNP 0020.scaffold00069 55542 1 A G - ReadM SNP 0020.scaffold00069 55638 1 A G - Both SNP 0020.scaffold00069 56118 1 C T scaffold8872 Both SNP 0020.scaffold00069 56630 1 C A scaffold8872 Both SNP 0020.scaffold00069 56844 1 A T scaffold8872 Both SNP 0020.scaffold00069 56957 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 57293 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 57295 1 G A scaffold8872 Both SNP 0020.scaffold00069 57425 1 C T scaffold8872 Both SNP 0020.scaffold00069 57430 1 T A scaffold8872 ReadM SNP 0020.scaffold00069 57552 1 G A - ScafM SNP 0020.scaffold00069 58022 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 58064 1 G . scaffold8872 ScafM INDEL 0020.scaffold00069 58067 1 G . scaffold8872 ScafM INDEL 0020.scaffold00069 58072 1 C . scaffold8872 ScafM SNP 0020.scaffold00069 58636 1 G A scaffold8872 Both SNP 0020.scaffold00069 58712 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 58736 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 59026 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 59101 4 TGAT .... scaffold8872 ScafM SNP 0020.scaffold00069 59159 1 T C scaffold8872 Both SNP 0020.scaffold00069 59281 1 C T scaffold8872 Both SNP 0020.scaffold00069 59308 1 T A scaffold8872 ReadM SNP 0020.scaffold00069 59503 1 T C - ScafM SNP 0020.scaffold00069 59674 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 59708 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 59722 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 59725 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 59728 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 59757 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 59791 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 59797 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 59799 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 60087 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 60091 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 60124 2 CA TG scaffold8872 ScafM SNP 0020.scaffold00069 60131 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60140 2 GC TT scaffold8872 ScafM SNP 0020.scaffold00069 60147 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 60157 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 60160 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 60174 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60178 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 60200 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60209 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60225 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 60240 2 TT .. scaffold8872 ScafM SNP 0020.scaffold00069 60243 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60250 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60253 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 60261 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 60277 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 60297 3 CCT ... scaffold8872 ScafM SNP 0020.scaffold00069 60302 3 CTA TGG scaffold8872 ScafM SNP 0020.scaffold00069 60307 2 TA GG scaffold8872 ScafM SNP 0020.scaffold00069 60311 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 60316 9 GTGAAAAAT ......... scaffold8872 ScafM INDEL 0020.scaffold00069 60326 2 AA .. scaffold8872 ScafM SNP 0020.scaffold00069 60331 3 CCA GGC scaffold8872 ScafM INDEL 0020.scaffold00069 60336 3 TTT ..G scaffold8872 ScafM SNP 0020.scaffold00069 60342 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 60344 5 TTTTT ..... scaffold8872 ScafM SNP 0020.scaffold00069 60350 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 60353 5 ATTTA ..... scaffold8872 ScafM SNP 0020.scaffold00069 60359 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 60361 1 A . scaffold8872 ScafM INDEL 0020.scaffold00069 60363 4 TTGA .... scaffold8872 ScafM INDEL 0020.scaffold00069 60371 6 AAAAAA ...... scaffold8872 ScafM INDEL 0020.scaffold00069 60378 4 AAAA .... scaffold8872 ScafM SNP 0020.scaffold00069 60421 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 60430 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 60434 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60443 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 60468 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 60479 4 ACAC .... scaffold8872 ScafM SNP 0020.scaffold00069 60498 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60597 1 G C scaffold8872 ScafM INDEL 0020.scaffold00069 60650 2 TT .. scaffold8872 ScafM SNP 0020.scaffold00069 60656 2 TC CT scaffold8872 ScafM SNP 0020.scaffold00069 60661 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 60671 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60677 1 C G scaffold8872 ScafM INDEL 0020.scaffold00069 60697 11 ........... TCTAAAGAAGT scaffold8872 ScafM INDEL 0020.scaffold00069 60698 2 .. AT scaffold8872 ScafM SNP 0020.scaffold00069 60705 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 60722 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 60726 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60732 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60741 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 60749 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 60755 1 . G scaffold8872 ScafM SNP 0020.scaffold00069 60776 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 60788 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60792 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 60794 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 60807 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 60810 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 60813 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 60819 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 60837 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60848 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 60855 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60860 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 60876 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 60888 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 60890 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 60899 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60905 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 60907 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 60918 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 63641 1 T A scaffold976 ReadM SNP 0020.scaffold00069 63849 1 G A - Both SNP 0020.scaffold00069 64267 1 C T scaffold976 Both SNP 0020.scaffold00069 64313 1 T C scaffold976 Both SNP 0020.scaffold00069 64351 1 T A scaffold976 ReadM SNP 0020.scaffold00069 66132 1 T C - ReadM SNP 0020.scaffold00069 66199 1 T A - ReadM SNP 0020.scaffold00069 66571 1 T C - ReadM SNP 0020.scaffold00069 66580 1 C T - ReadM SNP 0020.scaffold00069 66664 1 T C - ReadM SNP 0020.scaffold00069 67809 1 G T - ReadM SNP 0020.scaffold00069 67901 1 C G - ReadM SNP 0020.scaffold00069 67906 1 A T - ReadM SNP 0020.scaffold00069 68850 1 T A - ReadM INDEL 0020.scaffold00069 68935 1 . G - ReadM SNP 0020.scaffold00069 68953 1 A G - ReadM SNP 0020.scaffold00069 68999 1 G A - ReadM SNP 0020.scaffold00069 69064 1 T C - ScafM SNP 0020.scaffold00069 69941 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 69951 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 69984 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 69989 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 70003 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 70015 1 C T scaffold8872 Both SNP 0020.scaffold00069 70151 1 T C scaffold8872 Both SNP 0020.scaffold00069 70256 1 A C scaffold8872 Both SNP 0020.scaffold00069 70265 1 T G scaffold8872 Both INDEL 0020.scaffold00069 70298 1 . T scaffold8872 Both SNP 0020.scaffold00069 70443 1 A G scaffold8872 Both SNP 0020.scaffold00069 70494 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 70513 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 70517 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 70551 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 70556 3 GTT ... scaffold8872 ScafM INDEL 0020.scaffold00069 70561 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 70566 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70572 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70585 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 70594 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 70615 2 TT .. scaffold8872 ScafM SNP 0020.scaffold00069 70618 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70638 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70651 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 70671 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70673 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 70682 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 70688 1 C G scaffold8872 ScafM INDEL 0020.scaffold00069 70694 2 .. GA scaffold8872 ScafM SNP 0020.scaffold00069 70702 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70749 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 70785 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 70795 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 70808 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 70817 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70825 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 70847 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 70891 2 TG CA scaffold8872 Both SNP 0020.scaffold00069 70927 1 A C scaffold8872 Both SNP 0020.scaffold00069 70997 1 G T scaffold8872 Both SNP 0020.scaffold00069 71012 1 A G scaffold8872 Both SNP 0020.scaffold00069 71043 1 T G scaffold8872 Both SNP 0020.scaffold00069 71118 1 C G scaffold8872 Both SNP 0020.scaffold00069 71368 1 T G scaffold8872 Both SNP 0020.scaffold00069 71373 1 C T scaffold8872 Both SNP 0020.scaffold00069 71388 1 A G scaffold8872 Both SNP 0020.scaffold00069 71428 1 G T scaffold8872 Both INDEL 0020.scaffold00069 71451 1 . T scaffold8872 Both SNP 0020.scaffold00069 71570 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 71586 1 A T scaffold8872 Both SNP 0020.scaffold00069 71604 1 C T scaffold8872 Both INDEL 0020.scaffold00069 71642 1 C . scaffold8872 Both SNP 0020.scaffold00069 71849 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 72111 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 72118 1 A T scaffold8872 Both SNP 0020.scaffold00069 72332 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 72451 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 72460 2 TG GT scaffold8872 Both SNP 0020.scaffold00069 72475 1 T C scaffold8872 Both SNP 0020.scaffold00069 72626 1 T C scaffold8872 Both SNP 0020.scaffold00069 72826 1 C A scaffold8872 Both SNP 0020.scaffold00069 72835 1 T C scaffold8872 Both SNP 0020.scaffold00069 72880 1 G T scaffold8872 Both SNP 0020.scaffold00069 72899 1 T C scaffold8872 Both SNP 0020.scaffold00069 73065 1 T C scaffold8872 Both SNP 0020.scaffold00069 73078 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 73129 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 73144 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 73151 1 A . scaffold8872 ScafM INDEL 0020.scaffold00069 73155 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 73157 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 73224 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 73233 12 ............ TTTTGACCCCCC scaffold8872 ScafM SNP 0020.scaffold00069 73241 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 73246 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 73265 2 AT GC scaffold8872 ScafM INDEL 0020.scaffold00069 73301 2 GT .. scaffold8872 Both INDEL 0020.scaffold00069 73340 1 . T scaffold8872 Both SNP 0020.scaffold00069 73386 1 T C scaffold8872 Both SNP 0020.scaffold00069 73428 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 73450 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 73457 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 73477 1 A T scaffold8872 Both SNP 0020.scaffold00069 73527 1 C T scaffold8872 Both SNP 0020.scaffold00069 73544 1 A G scaffold8872 Both SNP 0020.scaffold00069 73638 1 T C scaffold8872 Both SNP 0020.scaffold00069 73753 1 T C scaffold8872 Both SNP 0020.scaffold00069 74136 1 A T scaffold8872 Both SNP 0020.scaffold00069 74190 1 A G scaffold8872 Both SNP 0020.scaffold00069 74507 1 G T scaffold8872 Both SNP 0020.scaffold00069 74616 1 C T scaffold8872 Both SNP 0020.scaffold00069 74655 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 74781 1 G A scaffold8872 Both SNP 0020.scaffold00069 75027 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 75539 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 75546 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 75572 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 75765 4 ATGT .... scaffold8872 ScafM SNP 0020.scaffold00069 75790 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 75801 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 75837 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 75877 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 75887 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 75913 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 76025 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 76046 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 77824 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 77885 4 TAAG .... scaffold8872 ScafM SNP 0020.scaffold00069 77897 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 78651 1 C T - ScafM SNP 0020.scaffold00069 78751 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 78758 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 78760 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 78771 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 78802 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 78814 3 ... GAA scaffold8872 ScafM INDEL 0020.scaffold00069 78820 1 . G scaffold8872 ScafM INDEL 0020.scaffold00069 78824 3 ... AAA scaffold8872 ScafM INDEL 0020.scaffold00069 78825 6 ...... AAAAAC scaffold8872 ScafM SNP 0020.scaffold00069 78830 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 78835 2 .. TG scaffold8872 ScafM SNP 0020.scaffold00069 78837 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 78840 2 CA TT scaffold8872 ScafM SNP 0020.scaffold00069 78892 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 78903 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 78905 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 78915 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 78918 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 78922 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 78964 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 78976 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 79051 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 79085 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 79095 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 79101 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 79138 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 79146 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 79267 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 79271 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 79347 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 79357 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 79359 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 79369 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 79373 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 79381 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 79405 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 79513 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 79525 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 80215 9 ......... AGTACTTCA scaffold8872 ScafM SNP 0020.scaffold00069 80236 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 81255 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 81298 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 81301 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 81328 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 81335 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 81339 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 81355 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 81358 4 .... ATAT scaffold8872 ScafM SNP 0020.scaffold00069 81405 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 81418 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 81430 1 C T scaffold8872 Both SNP 0020.scaffold00069 81559 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 81648 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 81660 3 TAG ... scaffold8872 ScafM SNP 0020.scaffold00069 81812 1 T C scaffold8872 Both INDEL 0020.scaffold00069 81840 1 T . scaffold8872 Both SNP 0020.scaffold00069 81980 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 82031 1 T C - ReadM SNP 0020.scaffold00069 82042 1 C T - ScafM INDEL 0020.scaffold00069 82055 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 82218 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 82227 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 82233 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 82280 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 82284 3 TAG ... scaffold8872 ScafM SNP 0020.scaffold00069 82291 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 82320 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 82359 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 82368 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 82370 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 82374 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 82404 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 82428 1 C T scaffold8872 Both SNP 0020.scaffold00069 82453 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 82549 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 82871 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 83498 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 83501 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 83503 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 83530 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 83575 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 83597 2 TA .G scaffold8872 ScafM SNP 0020.scaffold00069 83617 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 83634 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 83870 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 83893 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 85178 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 85204 2 GG AA scaffold8872 ScafM SNP 0020.scaffold00069 85221 1 C T scaffold8872 Both SNP 0020.scaffold00069 85253 1 A G scaffold8872 Both SNP 0020.scaffold00069 85341 1 C T scaffold8872 Both SNP 0020.scaffold00069 85411 1 C G scaffold8872 Both SNP 0020.scaffold00069 85414 1 T A scaffold8872 Both SNP 0020.scaffold00069 85443 1 T G scaffold8872 Both SNP 0020.scaffold00069 85505 1 A T scaffold8872 Both SNP 0020.scaffold00069 85513 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 85742 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 85772 2 CG TA scaffold8872 Both SNP 0020.scaffold00069 85780 1 A G scaffold8872 ReadM SNP 0020.scaffold00069 85959 1 C T - ReadM SNP 0020.scaffold00069 86043 1 T G - ReadM SNP 0020.scaffold00069 86081 1 A C - ReadM SNP 0020.scaffold00069 86137 1 A G - Both SNP 0020.scaffold00069 86212 1 G T scaffold8872 Both SNP 0020.scaffold00069 86324 1 A T scaffold8872 Both SNP 0020.scaffold00069 86442 1 C G scaffold8872 ReadM SNP 0020.scaffold00069 86523 1 A T - ReadM SNP 0020.scaffold00069 86627 1 A G - ReadM SNP 0020.scaffold00069 86645 1 T C - ReadM INDEL 0020.scaffold00069 86704 1 . T - ScafM INDEL 0020.scaffold00069 86765 3 ... ATT scaffold8872 Both SNP 0020.scaffold00069 86787 1 G A scaffold8872 Both SNP 0020.scaffold00069 86938 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 87253 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 87290 1 C A scaffold8872 ReadM SNP 0020.scaffold00069 87928 1 C T - ReadM SNP 0020.scaffold00069 87947 1 A G - ReadM SNP 0020.scaffold00069 87986 1 C T - ReadM SNP 0020.scaffold00069 88008 1 A G - ReadM SNP 0020.scaffold00069 88071 1 A T - ReadM SNP 0020.scaffold00069 88101 1 C T - ReadM SNP 0020.scaffold00069 88275 1 G A - ReadM SNP 0020.scaffold00069 88279 1 T C - ReadM SNP 0020.scaffold00069 88317 1 G A - ReadM SNP 0020.scaffold00069 88375 1 C G - ReadM SNP 0020.scaffold00069 88395 1 A T - ReadM SNP 0020.scaffold00069 88416 1 A G - ReadM SNP 0020.scaffold00069 88441 1 G C - ReadM SNP 0020.scaffold00069 88544 1 T G - ReadM SNP 0020.scaffold00069 88578 1 A G - ReadM SNP 0020.scaffold00069 88649 1 A G - ReadM SNP 0020.scaffold00069 88812 1 C T - ReadM SNP 0020.scaffold00069 89235 1 G C - ReadM INDEL 0020.scaffold00069 89279 1 . A - ReadM SNP 0020.scaffold00069 89374 1 A C - ReadM SNP 0020.scaffold00069 89529 1 G A - ReadM SNP 0020.scaffold00069 89565 1 T A - ReadM SNP 0020.scaffold00069 89579 1 T G - ScafM SNP 0020.scaffold00069 89689 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 89732 1 C T - ReadM SNP 0020.scaffold00069 89948 1 G A - ReadM SNP 0020.scaffold00069 90021 1 G A - ReadM SNP 0020.scaffold00069 90033 1 G A - ScafM SNP 0020.scaffold00069 90088 1 C T scaffold8872 ReadM SNP 0020.scaffold00069 90196 1 T A - ReadM SNP 0020.scaffold00069 90203 1 C T - Both SNP 0020.scaffold00069 90345 1 C T scaffold8872 Both INDEL 0020.scaffold00069 90357 2 .. GG scaffold8872 ScafM SNP 0020.scaffold00069 90423 1 T C scaffold8872 Both SNP 0020.scaffold00069 90461 1 T C scaffold8872 ReadM SNP 0020.scaffold00069 90630 1 A G - ReadM SNP 0020.scaffold00069 90741 1 A T - ReadM SNP 0020.scaffold00069 90766 1 G T - ReadM SNP 0020.scaffold00069 91183 1 C T - ReadM SNP 0020.scaffold00069 91559 1 T G - ReadM SNP 0020.scaffold00069 91564 1 T C - ReadM SNP 0020.scaffold00069 91618 1 G A - ReadM SNP 0020.scaffold00069 91655 1 G T - ReadM SNP 0020.scaffold00069 91690 1 C A - ReadM SNP 0020.scaffold00069 91731 1 C A - Both SNP 0020.scaffold00069 91873 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 91939 4 TTTG .... scaffold8872 ScafM INDEL 0020.scaffold00069 91948 1 C . scaffold8872 ScafM SNP 0020.scaffold00069 92010 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92027 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 92030 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 92042 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 92047 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 92057 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 92064 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 92069 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 92085 2 CT AC scaffold8872 ScafM SNP 0020.scaffold00069 92110 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 92118 1 . C scaffold8872 ScafM SNP 0020.scaffold00069 92142 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 92151 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 92153 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92208 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 92211 4 .... ATTC scaffold8872 ScafM SNP 0020.scaffold00069 92227 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 92229 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 92235 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 92247 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92261 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 92264 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 92288 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 92291 2 AA .T scaffold8872 ScafM INDEL 0020.scaffold00069 92314 2 TA .. scaffold8872 ScafM SNP 0020.scaffold00069 92337 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 92365 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92376 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 92388 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 92411 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 92427 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 92444 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 92446 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92448 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 92475 4 TACA .... scaffold8872 ScafM SNP 0020.scaffold00069 92501 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92514 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 92517 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 92541 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 92565 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 92584 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92610 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92612 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 92627 2 AT GC scaffold8872 ScafM SNP 0020.scaffold00069 92632 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92638 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92695 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 92722 1 A G scaffold8872 Both SNP 0020.scaffold00069 92775 1 A C scaffold8872 Both SNP 0020.scaffold00069 92834 1 C T scaffold8872 Both INDEL 0020.scaffold00069 92892 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 92898 1 C T scaffold8872 Both SNP 0020.scaffold00069 92963 1 A T scaffold8872 Both SNP 0020.scaffold00069 93022 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 93058 3 ..C AAA scaffold8872 ScafM SNP 0020.scaffold00069 93065 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 93073 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 93091 2 GC CA scaffold8872 ScafM SNP 0020.scaffold00069 93097 1 A C scaffold8872 ReadM SNP 0020.scaffold00069 93262 1 T C - ReadM SNP 0020.scaffold00069 93285 1 A G - ReadM SNP 0020.scaffold00069 93642 1 A C - ReadM SNP 0020.scaffold00069 93656 1 G A - ReadM SNP 0020.scaffold00069 93740 1 C T - ReadM SNP 0020.scaffold00069 94115 1 C T - ScafM SNP 0020.scaffold00069 94782 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 94794 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 94815 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 95320 1 C T scaffold8872 Both SNP 0020.scaffold00069 95365 1 A C scaffold8872 Both SNP 0020.scaffold00069 95380 1 T C scaffold8872 Both SNP 0020.scaffold00069 95389 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 95488 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 95490 1 T C scaffold8872 Both SNP 0020.scaffold00069 95551 1 A C scaffold8872 Both SNP 0020.scaffold00069 95596 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 95647 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 95650 1 G A scaffold8872 Both SNP 0020.scaffold00069 95683 1 T G scaffold8872 Both SNP 0020.scaffold00069 95797 1 G A scaffold8872 Both SNP 0020.scaffold00069 95851 1 C T scaffold8872 Both SNP 0020.scaffold00069 95854 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 95899 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 95907 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 95910 9 TGTTCATTC ......... scaffold8872 Both SNP 0020.scaffold00069 95941 1 A T scaffold8872 ReadM SNP 0020.scaffold00069 96572 1 T C - ReadM SNP 0020.scaffold00069 96650 1 A G - Both SNP 0020.scaffold00069 96765 1 A T scaffold8872 Both SNP 0020.scaffold00069 96826 1 G C scaffold8872 Both SNP 0020.scaffold00069 96924 2 GT AC scaffold8872 ScafM INDEL 0020.scaffold00069 97093 8 ........ AGTTTTGT scaffold8872 ScafM SNP 0020.scaffold00069 97106 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 97137 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 97147 3 ... AGG scaffold8872 Both SNP 0020.scaffold00069 97200 1 T A scaffold8872 Both INDEL 0020.scaffold00069 97239 2 AA .. scaffold8872 Both SNP 0020.scaffold00069 97300 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 97310 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 97367 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 97376 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 97391 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 97442 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 97447 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 97465 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 97471 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 97523 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 98393 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 98401 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 98519 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 98575 2 CG AT scaffold8872 Both SNP 0020.scaffold00069 98612 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 98640 1 . T scaffold8872 Both SNP 0020.scaffold00069 98668 1 G C scaffold8872 ReadM SNP 0020.scaffold00069 98793 1 G C - ReadM SNP 0020.scaffold00069 98816 1 C T - ReadM SNP 0020.scaffold00069 98897 1 G A - ScafM SNP 0020.scaffold00069 98930 1 G A scaffold8872 Both INDEL 0020.scaffold00069 98944 2 TC .. scaffold8872 Both SNP 0020.scaffold00069 99110 1 G A scaffold8872 Both SNP 0020.scaffold00069 99279 1 C A scaffold8872 Both SNP 0020.scaffold00069 99286 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 99314 1 . A scaffold8872 ScafM INDEL 0020.scaffold00069 99349 7 ATTCCTC ....... scaffold8872 ScafM SNP 0020.scaffold00069 99408 1 G A scaffold8872 Both SNP 0020.scaffold00069 99437 1 G A scaffold8872 Both SNP 0020.scaffold00069 99459 1 A G scaffold8872 Both SNP 0020.scaffold00069 99470 1 C G scaffold8872 Both SNP 0020.scaffold00069 99551 1 A G scaffold8872 ReadM SNP 0020.scaffold00069 99576 1 C T - ReadM SNP 0020.scaffold00069 99669 1 A G - ReadM SNP 0020.scaffold00069 99688 1 T A - ReadM SNP 0020.scaffold00069 99740 1 A G - ScafM SNP 0020.scaffold00069 99999 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 100010 2 .. AA scaffold8872 ScafM SNP 0020.scaffold00069 100029 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 100076 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 100080 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 100240 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 100260 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 100298 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 100323 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 100353 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 100357 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 100364 6 ...... GTTTCG scaffold8872 ScafM SNP 0020.scaffold00069 100377 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 100379 2 AA .T scaffold8872 ScafM SNP 0020.scaffold00069 100383 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 100387 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 103567 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 103570 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 103579 1 C . scaffold8872 ScafM SNP 0020.scaffold00069 103630 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 103727 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 103872 2 CT TC scaffold8872 Both SNP 0020.scaffold00069 103889 1 C T scaffold8872 Both SNP 0020.scaffold00069 104046 1 T C scaffold8872 Both INDEL 0020.scaffold00069 104062 1 . T scaffold8872 ReadM SNP 0020.scaffold00069 104110 1 T G - Both SNP 0020.scaffold00069 104190 1 G T scaffold8872 Both SNP 0020.scaffold00069 104221 1 A G scaffold8872 Both SNP 0020.scaffold00069 104246 1 T C scaffold8872 Both SNP 0020.scaffold00069 104331 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 104344 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 104351 3 ... ACG scaffold8872 ScafM INDEL 0020.scaffold00069 104354 3 ... AGG scaffold8872 ScafM SNP 0020.scaffold00069 104386 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 104419 1 G C scaffold8872 ReadM SNP 0020.scaffold00069 104865 1 G A - ReadM SNP 0020.scaffold00069 105109 1 G C - ScafM SNP 0020.scaffold00069 105956 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 105963 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 105971 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 105981 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 105989 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 105996 1 . C scaffold8872 ScafM SNP 0020.scaffold00069 106046 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 107321 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 107334 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 107336 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 107358 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 107403 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 107417 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 107430 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 107539 5 ..... TAAGC scaffold8872 Both SNP 0020.scaffold00069 107658 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 107769 3 ... TAA scaffold8872 ScafM INDEL 0020.scaffold00069 107782 1 . T scaffold8872 ReadM SNP 0020.scaffold00069 107853 1 T A - Both SNP 0020.scaffold00069 107872 1 T A scaffold8872 Both SNP 0020.scaffold00069 108020 1 G C scaffold8872 Both SNP 0020.scaffold00069 108060 1 T G scaffold8872 Both SNP 0020.scaffold00069 108118 1 G T scaffold8872 Both SNP 0020.scaffold00069 108127 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 108283 1 C T scaffold8872 ReadM INDEL 0020.scaffold00069 108348 1 C . - ReadM SNP 0020.scaffold00069 108422 1 T A - ReadM SNP 0020.scaffold00069 108443 1 G C - ReadM SNP 0020.scaffold00069 108501 1 C T - ReadM SNP 0020.scaffold00069 108548 1 G A - ReadM SNP 0020.scaffold00069 108576 1 T C - ReadM SNP 0020.scaffold00069 108619 1 A T - ReadM SNP 0020.scaffold00069 108694 1 T C - ReadM SNP 0020.scaffold00069 108944 1 T A - ReadM SNP 0020.scaffold00069 108980 1 C T - ReadM SNP 0020.scaffold00069 109077 1 T C - ScafM SNP 0020.scaffold00069 109517 1 G C scaffold8872 ScafM INDEL 0020.scaffold00069 109583 4 .... ATAT scaffold8872 ScafM SNP 0020.scaffold00069 109587 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 109608 1 G . scaffold8872 ScafM INDEL 0020.scaffold00069 109959 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 110014 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 110110 4 ATTA .... scaffold8872 ScafM INDEL 0020.scaffold00069 110182 12 ............ TGCATACATGCA scaffold8872 ScafM SNP 0020.scaffold00069 110206 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 110259 6 ...... AGCACC scaffold8872 Both SNP 0020.scaffold00069 110410 1 A G scaffold8872 Both SNP 0020.scaffold00069 110419 1 T G scaffold8872 Both SNP 0020.scaffold00069 110437 1 A G scaffold8872 Both SNP 0020.scaffold00069 110458 1 A T scaffold8872 ReadM SNP 0020.scaffold00069 110732 1 A G - ReadM SNP 0020.scaffold00069 110801 1 C T - Both SNP 0020.scaffold00069 110860 1 A G scaffold8872 Both SNP 0020.scaffold00069 110878 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 110929 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 110931 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 110945 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 110970 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 110975 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 110982 1 G T scaffold8872 Both SNP 0020.scaffold00069 111001 1 T G scaffold8872 Both SNP 0020.scaffold00069 111014 1 A T scaffold8872 Both SNP 0020.scaffold00069 111022 1 G T scaffold8872 Both INDEL 0020.scaffold00069 111163 3 ... GTT scaffold8872 Both SNP 0020.scaffold00069 111220 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 111299 4 CTAG .... scaffold8872 Both SNP 0020.scaffold00069 111405 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 111460 2 GA AT scaffold8872 ScafM SNP 0020.scaffold00069 111496 2 TT AA scaffold8872 ScafM INDEL 0020.scaffold00069 111505 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 111524 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 111570 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 111663 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 112069 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 112095 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 112109 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 112122 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 112185 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 112210 7 GACTCCA ....... scaffold8872 ScafM SNP 0020.scaffold00069 112232 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 112494 1 G T scaffold8786 ScafM INDEL 0020.scaffold00069 112497 1 . C scaffold8786 ScafM INDEL 0020.scaffold00069 112499 1 . T scaffold8786 ScafM INDEL 0020.scaffold00069 112501 1 . T scaffold8786 ScafM INDEL 0020.scaffold00069 112505 6 ...... CCTCCA scaffold8786 ScafM INDEL 0020.scaffold00069 112506 1 . C scaffold8786 ScafM SNP 0020.scaffold00069 112593 1 C G scaffold8786 ScafM SNP 0020.scaffold00069 112610 1 A G scaffold8786 ScafM SNP 0020.scaffold00069 112620 1 T C scaffold8786 ScafM INDEL 0020.scaffold00069 112633 1 A . scaffold8786 ScafM SNP 0020.scaffold00069 112637 1 A G scaffold8786 ScafM SNP 0020.scaffold00069 112647 1 G T scaffold8786 ScafM SNP 0020.scaffold00069 112700 2 CC TT scaffold8786 ScafM SNP 0020.scaffold00069 112749 1 G A scaffold8786 ScafM SNP 0020.scaffold00069 112776 1 T C scaffold8786 ScafM INDEL 0020.scaffold00069 112781 1 C . scaffold8786 ScafM SNP 0020.scaffold00069 112849 1 T G scaffold8786 ScafM SNP 0020.scaffold00069 112880 1 A G scaffold8786 ScafM SNP 0020.scaffold00069 112907 1 G A scaffold8786 ScafM SNP 0020.scaffold00069 112929 1 C T scaffold8786 ScafM SNP 0020.scaffold00069 112937 1 A G scaffold8786 ScafM SNP 0020.scaffold00069 113014 1 T G scaffold8786 ScafM INDEL 0020.scaffold00069 113083 1 . C scaffold8786 ScafM SNP 0020.scaffold00069 113640 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 113674 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 113697 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 113702 1 . T scaffold8872 ScafM INDEL 0020.scaffold00069 113711 3 AAA ... scaffold8872 ScafM SNP 0020.scaffold00069 113728 2 GG AA scaffold8872 ScafM SNP 0020.scaffold00069 113758 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 113761 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 113875 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 113918 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 113946 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 114032 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 114098 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 114176 4 .... ATCG scaffold8872 ScafM INDEL 0020.scaffold00069 114182 2 .. AT scaffold8872 ScafM SNP 0020.scaffold00069 114236 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 114243 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 114249 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 114257 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 115931 3 TAG ... scaffold8872 ScafM SNP 0020.scaffold00069 115935 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 115997 1 C A scaffold8872 ScafM INDEL 0020.scaffold00069 115998 1 . T scaffold8872 ScafM INDEL 0020.scaffold00069 115999 4 .... CGGC scaffold8872 ScafM INDEL 0020.scaffold00069 116001 1 . T scaffold8872 ScafM INDEL 0020.scaffold00069 116002 1 . G scaffold8872 ScafM SNP 0020.scaffold00069 116060 2 CC GT scaffold8872 ScafM SNP 0020.scaffold00069 116066 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 116085 11 ........... TGACCAGCGTG scaffold8872 ScafM SNP 0020.scaffold00069 116111 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 116128 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 116132 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 116640 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 116645 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 116647 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 116661 2 AC GT scaffold8872 ScafM SNP 0020.scaffold00069 116703 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 116991 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 116993 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 117022 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 117032 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 117034 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 118089 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 118139 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 118607 2 AT .. scaffold8872 ScafM SNP 0020.scaffold00069 118621 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 118631 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 118633 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 118639 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 118648 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 118650 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 118663 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 118665 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 118676 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 118803 2 AA .. scaffold8872 ScafM INDEL 0020.scaffold00069 118858 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 118861 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 118881 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 118894 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 119917 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 119941 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 119957 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 119969 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 119971 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 119976 5 ..... AAATT scaffold8872 ScafM INDEL 0020.scaffold00069 120012 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 120018 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 120041 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 121758 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 121770 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 121786 4 AAAC .... scaffold8872 ScafM INDEL 0020.scaffold00069 121795 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 121797 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 121802 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 121808 2 .T AA scaffold8872 ScafM SNP 0020.scaffold00069 121828 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 121836 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 121914 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 121948 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 121979 4 CTAA ...G scaffold8872 ScafM SNP 0020.scaffold00069 122003 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 122012 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 122052 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 122791 1 . C scaffold8872 ScafM INDEL 0020.scaffold00069 122803 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 122829 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 122854 2 CA TG scaffold8872 ScafM INDEL 0020.scaffold00069 122861 1 . G scaffold8872 ScafM SNP 0020.scaffold00069 122863 2 AT GG scaffold8872 ScafM SNP 0020.scaffold00069 122870 2 AA GG scaffold8872 ScafM SNP 0020.scaffold00069 122874 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 122881 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 122915 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 122919 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 122951 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 122958 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 122980 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 122983 2 GA CG scaffold8872 ScafM INDEL 0020.scaffold00069 123068 5 ..TAA GGCCT scaffold8872 ScafM INDEL 0020.scaffold00069 123076 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 123092 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 123105 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 123128 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 123130 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 123136 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 123152 2 TT GC scaffold8872 ScafM SNP 0020.scaffold00069 123187 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 123196 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 123357 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 123361 2 AT TC scaffold8872 ScafM SNP 0020.scaffold00069 123378 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 123380 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 123384 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 123409 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 123415 6 ...... AAAAAA scaffold8872 ScafM INDEL 0020.scaffold00069 123457 2 .A TG scaffold8872 ScafM SNP 0020.scaffold00069 123461 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 123465 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 123517 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 123577 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 123616 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 123639 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 123644 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 123652 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 123675 4 TAGT .... scaffold8872 ScafM SNP 0020.scaffold00069 123698 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 123732 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 123747 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 123764 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 123770 15 TACTTTTCAAAGTTA ............... scaffold8872 ScafM SNP 0020.scaffold00069 123812 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 123843 3 TAG ... scaffold8872 Both SNP 0020.scaffold00069 123878 1 G A scaffold8872 Both SNP 0020.scaffold00069 123964 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 123992 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 124000 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 124027 1 C G scaffold8872 ScafM INDEL 0020.scaffold00069 124041 1 A . scaffold8872 Both SNP 0020.scaffold00069 124063 1 A G scaffold8872 Both SNP 0020.scaffold00069 124143 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 124163 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 124177 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 124187 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 124192 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 124214 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 124223 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 124249 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 124253 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 124265 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 124267 2 AA .. scaffold8872 ScafM SNP 0020.scaffold00069 124274 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 124288 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 124336 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 124401 4 .... ATTA scaffold8872 ScafM SNP 0020.scaffold00069 124426 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 124443 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 124448 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 124455 1 A . scaffold8872 ScafM INDEL 0020.scaffold00069 124469 2 .. AT scaffold8872 ScafM INDEL 0020.scaffold00069 124475 3 ... AAA scaffold8872 ReadM SNP 0020.scaffold00069 124489 1 A T - Both SNP 0020.scaffold00069 124521 1 G A scaffold8872 ReadM SNP 0020.scaffold00069 124612 1 G A - ReadM SNP 0020.scaffold00069 124620 1 T C - ReadM SNP 0020.scaffold00069 124750 1 A T - ReadM SNP 0020.scaffold00069 124915 1 A G - ReadM SNP 0020.scaffold00069 124993 2 AA GG - ReadM SNP 0020.scaffold00069 125036 1 C G - ReadM SNP 0020.scaffold00069 125059 1 A G - ReadM SNP 0020.scaffold00069 125095 1 A G - Both SNP 0020.scaffold00069 125167 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 125259 1 T A scaffold8872 ScafM INDEL 0020.scaffold00069 125261 2 .. GC scaffold8872 Both SNP 0020.scaffold00069 125294 1 G C scaffold8872 ScafM INDEL 0020.scaffold00069 125725 2 .. TT scaffold8872 ScafM SNP 0020.scaffold00069 125738 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 125834 5 ATGGA ....C scaffold8872 ScafM SNP 0020.scaffold00069 126009 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 127129 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 127233 1 . A scaffold8872 ScafM INDEL 0020.scaffold00069 127292 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 127897 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 127921 2 TG AA scaffold8872 ScafM INDEL 0020.scaffold00069 127928 3 ATG ... scaffold8872 ReadM SNP 0020.scaffold00069 128135 1 C T - ReadM SNP 0020.scaffold00069 128244 1 G A - ScafM SNP 0020.scaffold00069 128539 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 128554 2 AT .. scaffold8872 ScafM SNP 0020.scaffold00069 128573 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 128580 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 128586 1 T C scaffold8872 Both SNP 0020.scaffold00069 128689 1 A C scaffold8872 Both SNP 0020.scaffold00069 128698 1 A G scaffold8872 Both SNP 0020.scaffold00069 128764 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 128777 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 128787 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 128814 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 128819 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 128862 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 128874 1 . A scaffold8872 ScafM INDEL 0020.scaffold00069 128889 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 128908 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 128966 3 ... ATC scaffold8872 ScafM SNP 0020.scaffold00069 129042 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 129052 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 129070 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 129078 8 ATGAATTG ........ scaffold8872 ScafM SNP 0020.scaffold00069 129105 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 129166 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 129222 1 G T scaffold8872 ScafM INDEL 0020.scaffold00069 129252 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 129262 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 129266 3 .AA TGC scaffold8872 ScafM SNP 0020.scaffold00069 129270 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 129304 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 129306 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 129317 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 129338 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 129366 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 129400 7 AGTCATA ....... scaffold8872 ScafM SNP 0020.scaffold00069 129416 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 129572 7 ACCTGCA ....... scaffold8872 ScafM SNP 0020.scaffold00069 129617 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 129648 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 129651 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 129653 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 132758 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 132782 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 132787 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 132796 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 132824 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 132847 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 133009 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133017 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 133040 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 133045 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 133066 1 . C scaffold8872 ScafM SNP 0020.scaffold00069 133070 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133075 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133083 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 133087 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133101 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133106 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 133111 5 ATTTT ....C scaffold8872 ScafM SNP 0020.scaffold00069 133117 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 133125 1 C G scaffold8872 ScafM INDEL 0020.scaffold00069 133131 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 133140 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 133156 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 133160 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133187 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133190 2 TG CA scaffold8872 ScafM SNP 0020.scaffold00069 133197 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133216 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 133221 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 133229 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 133234 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 133243 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133252 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 133302 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133340 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 133347 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133356 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 133361 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 133365 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 133380 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 133386 4 .... CTCG scaffold8872 ScafM SNP 0020.scaffold00069 133394 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 133399 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 133409 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 133418 13 ............. ATTCTCCTTGCTG scaffold8872 ScafM SNP 0020.scaffold00069 133428 2 TG CC scaffold8872 ScafM SNP 0020.scaffold00069 133439 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 133449 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 133459 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 133514 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 134028 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 134030 1 C G scaffold8872 ScafM SNP 0020.scaffold00069 134032 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 134039 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 134052 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 134062 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 134076 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 134120 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 134128 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 134130 1 T G scaffold8872 ScafM SNP 0020.scaffold00069 134132 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 134345 1 C T scaffold8872 ScafM INDEL 0020.scaffold00069 135094 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 135131 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135156 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 135172 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135189 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135205 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135210 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135212 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 135214 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135216 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 135219 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 135222 1 T . scaffold8872 ScafM INDEL 0020.scaffold00069 135235 1 T . scaffold8872 ScafM SNP 0020.scaffold00069 135246 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 135558 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135578 2 AC TT scaffold8872 ScafM SNP 0020.scaffold00069 135582 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135584 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135610 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135632 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135641 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 135686 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135695 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135697 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 135708 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 135734 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135736 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135747 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 135748 1 . A scaffold8872 ScafM SNP 0020.scaffold00069 135764 2 TG GA scaffold8872 ScafM SNP 0020.scaffold00069 135814 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 135823 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 135828 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 135859 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 135902 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 135924 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 135975 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 135993 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 135998 1 A C scaffold8872 ScafM INDEL 0020.scaffold00069 136024 5 ..... TCATG scaffold8872 ScafM SNP 0020.scaffold00069 136064 1 G C scaffold8872 ScafM SNP 0020.scaffold00069 136066 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 136100 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136142 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 136145 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136165 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 136194 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136213 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 136218 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 136223 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136634 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 136636 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136639 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 136641 2 GT AG scaffold8872 ScafM INDEL 0020.scaffold00069 136659 2 AT .C scaffold8872 ScafM SNP 0020.scaffold00069 136678 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 136696 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 136717 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 136723 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 136725 2 AG GA scaffold8872 ScafM SNP 0020.scaffold00069 136730 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 136755 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 136776 3 AAT ... scaffold8872 ScafM INDEL 0020.scaffold00069 136781 3 ATT ..G scaffold8872 ScafM INDEL 0020.scaffold00069 136809 1 . T scaffold8872 ScafM SNP 0020.scaffold00069 136817 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 136823 3 TTT ... scaffold8872 ScafM INDEL 0020.scaffold00069 136827 1 C . scaffold8872 ScafM SNP 0020.scaffold00069 136857 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 136863 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 136886 1 C . scaffold8872 ScafM SNP 0020.scaffold00069 136888 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 136895 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 136898 8 TTTGAGTT ........ scaffold8872 ScafM SNP 0020.scaffold00069 136909 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 136911 1 T C scaffold8872 ScafM SNP 0020.scaffold00069 136921 1 C A scaffold8872 ScafM SNP 0020.scaffold00069 136924 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 136926 1 A C scaffold8872 ScafM SNP 0020.scaffold00069 136933 1 G A scaffold8872 ScafM SNP 0020.scaffold00069 136936 1 T C scaffold8872 ScafM INDEL 0020.scaffold00069 136941 3 CAT ... scaffold8872 ScafM SNP 0020.scaffold00069 136955 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 136957 1 G A scaffold8872 ScafM INDEL 0020.scaffold00069 136983 5 TATTT ..... scaffold8872 ScafM INDEL 0020.scaffold00069 137008 2 .. AT scaffold8872 ScafM SNP 0020.scaffold00069 137010 1 C T scaffold8872 ScafM SNP 0020.scaffold00069 137028 1 A T scaffold8872 ScafM SNP 0020.scaffold00069 137036 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 137043 1 . T scaffold8872 Both INDEL 0020.scaffold00069 137069 1 . T scaffold8872 Both SNP 0020.scaffold00069 137135 1 A G scaffold8872 ScafM SNP 0020.scaffold00069 137149 1 A G scaffold8872 ScafM INDEL 0020.scaffold00069 137151 2 AA .. scaffold8872 ScafM INDEL 0020.scaffold00069 137187 7 ....... TGTCTAC scaffold8872 ScafM INDEL 0020.scaffold00069 137200 1 A . scaffold8872 ScafM SNP 0020.scaffold00069 137213 1 A T scaffold8872 Both SNP 0020.scaffold00069 137283 1 G A scaffold8872 Both SNP 0020.scaffold00069 137295 1 A T scaffold8872 ScafM INDEL 0020.scaffold00069 137346 6 AGCCAG ....TT scaffold8872 ScafM SNP 0020.scaffold00069 137353 1 G T scaffold8872 ScafM SNP 0020.scaffold00069 137355 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 137359 5 CTTAT ...GC scaffold8872 ScafM SNP 0020.scaffold00069 137367 2 CC GG scaffold8872 ReadM SNP 0020.scaffold00069 137670 1 C G - ScafM INDEL 0020.scaffold00069 137892 1 G . scaffold8872 ScafM SNP 0020.scaffold00069 137894 1 T A scaffold8872 ScafM SNP 0020.scaffold00069 137904 1 T G scaffold8872 ScafM INDEL 0020.scaffold00069 138872 2 .T GA scaffold10246 ScafM INDEL 0020.scaffold00069 138881 6 ...... TTGAGT scaffold10246 ScafM SNP 0020.scaffold00069 138962 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 138976 1 T . scaffold10246 ScafM INDEL 0020.scaffold00069 138995 15 ............... CGTCAAAAAAAATTA scaffold10246 ScafM INDEL 0020.scaffold00069 139000 12 ............ AAAAAAGTGTGT scaffold10246 ScafM SNP 0020.scaffold00069 139016 1 C G scaffold10246 ScafM INDEL 0020.scaffold00069 139048 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 139056 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 139058 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 139658 1 T A scaffold10246 ScafM INDEL 0020.scaffold00069 139667 1 . C scaffold10246 ScafM SNP 0020.scaffold00069 139675 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 139701 2 AG TA scaffold10246 ScafM SNP 0020.scaffold00069 139726 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 139962 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 139979 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 139983 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 140024 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 140026 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 140029 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 140038 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 140050 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 140053 1 . A scaffold10246 ScafM SNP 0020.scaffold00069 140056 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 140088 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 140097 2 GC AT scaffold10246 ScafM SNP 0020.scaffold00069 140102 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 140132 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 140140 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 140160 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 140162 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 140186 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 140216 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 140219 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 140254 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 140267 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 140276 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 140311 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 140326 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 140340 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 140348 1 G . scaffold10246 ScafM SNP 0020.scaffold00069 140364 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 140397 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 141138 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 141146 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 141148 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 141152 4 GTAC .... scaffold10246 ScafM SNP 0020.scaffold00069 141163 1 C T scaffold10246 ScafM INDEL 0020.scaffold00069 141220 8 AGCAAATG ........ scaffold10246 ScafM SNP 0020.scaffold00069 141243 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 141272 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 141405 1 C T scaffold10246 Both SNP 0020.scaffold00069 141428 1 C G scaffold10246 ScafM INDEL 0020.scaffold00069 143238 2 .. TT scaffold10246 Both SNP 0020.scaffold00069 143365 1 A C scaffold10246 Both SNP 0020.scaffold00069 143411 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 143468 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 143477 2 GC TT scaffold10246 ScafM SNP 0020.scaffold00069 143498 2 CC TG scaffold10246 ScafM SNP 0020.scaffold00069 143574 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 143586 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 143588 1 T C scaffold10246 Both SNP 0020.scaffold00069 143609 1 G A scaffold10246 Both INDEL 0020.scaffold00069 143734 1 T . scaffold10246 ScafM SNP 0020.scaffold00069 143743 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 143761 2 AT .. scaffold10246 Both SNP 0020.scaffold00069 144140 1 C T scaffold10246 Both SNP 0020.scaffold00069 144227 1 G T scaffold10246 Both SNP 0020.scaffold00069 144738 1 T C scaffold10246 Both SNP 0020.scaffold00069 144749 1 C T scaffold10246 ScafM INDEL 0020.scaffold00069 144879 4 .... AAAA scaffold10246 Both SNP 0020.scaffold00069 144957 1 C T scaffold10246 Both SNP 0020.scaffold00069 145068 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 145083 1 A G scaffold10246 ReadM SNP 0020.scaffold00069 145655 1 A C - ReadM SNP 0020.scaffold00069 145672 1 T C - ReadM INDEL 0020.scaffold00069 146335 1 G . - ReadM INDEL 0020.scaffold00069 146368 1 . A - ReadM INDEL 0020.scaffold00069 146735 1 . A - ReadM SNP 0020.scaffold00069 146799 1 A G - ReadM SNP 0020.scaffold00069 146912 1 A C - ReadM SNP 0020.scaffold00069 146937 1 G A - ReadM SNP 0020.scaffold00069 147175 1 A G - ReadM SNP 0020.scaffold00069 147207 1 A G - ReadM SNP 0020.scaffold00069 147209 1 C T - ReadM SNP 0020.scaffold00069 147260 1 C T - ReadM SNP 0020.scaffold00069 147338 1 T C - ReadM SNP 0020.scaffold00069 147546 1 T G - ReadM SNP 0020.scaffold00069 147818 1 G A - ReadM INDEL 0020.scaffold00069 148001 1 A . - ReadM SNP 0020.scaffold00069 148027 1 G A - ReadM SNP 0020.scaffold00069 148070 1 A G - ReadM SNP 0020.scaffold00069 148165 1 A G - ReadM SNP 0020.scaffold00069 148285 1 T A - ReadM SNP 0020.scaffold00069 148346 1 C T - ReadM SNP 0020.scaffold00069 148416 1 T C - ReadM SNP 0020.scaffold00069 148473 1 C G - ReadM SNP 0020.scaffold00069 148496 1 G A - ReadM INDEL 0020.scaffold00069 148525 1 . C - ReadM SNP 0020.scaffold00069 149212 1 C T - ReadM SNP 0020.scaffold00069 149321 1 G A - ReadM SNP 0020.scaffold00069 149356 1 A G - ReadM INDEL 0020.scaffold00069 149594 2 TT .. - ReadM SNP 0020.scaffold00069 149679 1 A T - ReadM SNP 0020.scaffold00069 149699 1 A G - ReadM SNP 0020.scaffold00069 149739 1 T C - ReadM SNP 0020.scaffold00069 149747 1 T C - ReadM INDEL 0020.scaffold00069 149774 1 . A - Both SNP 0020.scaffold00069 149871 1 A T scaffold10246 Both SNP 0020.scaffold00069 149891 1 T A scaffold10246 ScafM INDEL 0020.scaffold00069 149905 2 AA .. scaffold10246 ScafM SNP 0020.scaffold00069 149910 1 A C scaffold10246 Both SNP 0020.scaffold00069 149932 1 T C scaffold10246 Both SNP 0020.scaffold00069 149945 1 G A scaffold10246 Both SNP 0020.scaffold00069 150162 1 G T scaffold10246 Both SNP 0020.scaffold00069 150181 1 A C scaffold10246 Both SNP 0020.scaffold00069 150238 1 A C scaffold10246 Both SNP 0020.scaffold00069 150255 1 C T scaffold10246 Both SNP 0020.scaffold00069 150282 1 A T scaffold10246 Both SNP 0020.scaffold00069 150305 1 C T scaffold10246 Both SNP 0020.scaffold00069 150324 1 G A scaffold10246 Both SNP 0020.scaffold00069 150419 1 G C scaffold10246 Both SNP 0020.scaffold00069 150432 1 A C scaffold10246 Both INDEL 0020.scaffold00069 150449 1 . G scaffold10246 Both SNP 0020.scaffold00069 150476 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 150888 1 C T scaffold10246 Both SNP 0020.scaffold00069 150981 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 151004 2 CC TG scaffold10246 Both SNP 0020.scaffold00069 151117 1 G A scaffold10246 Both SNP 0020.scaffold00069 151178 1 T C scaffold10246 Both SNP 0020.scaffold00069 151185 1 C T scaffold10246 Both SNP 0020.scaffold00069 151219 1 A C scaffold10246 Both SNP 0020.scaffold00069 151306 1 A C scaffold10246 Both SNP 0020.scaffold00069 151401 1 G A scaffold10246 Both SNP 0020.scaffold00069 151424 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 151433 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 151456 1 . A scaffold10246 Both SNP 0020.scaffold00069 151473 1 T C scaffold10246 Both SNP 0020.scaffold00069 151477 1 T C scaffold10246 Both SNP 0020.scaffold00069 151542 1 G C scaffold10246 Both SNP 0020.scaffold00069 151593 1 A G scaffold10246 Both SNP 0020.scaffold00069 151688 1 C T scaffold10246 Both SNP 0020.scaffold00069 151717 1 G A scaffold10246 Both SNP 0020.scaffold00069 151789 1 C T scaffold10246 Both SNP 0020.scaffold00069 151808 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 151974 1 A T scaffold10246 Both SNP 0020.scaffold00069 152230 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 152584 1 A . scaffold10246 Both SNP 0020.scaffold00069 152747 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 152759 2 CC GT scaffold10246 Both INDEL 0020.scaffold00069 152858 2 GT .. scaffold10246 Both SNP 0020.scaffold00069 152904 1 G C scaffold10246 Both INDEL 0020.scaffold00069 152967 1 . A scaffold10246 ScafM INDEL 0020.scaffold00069 152994 2 TT .. scaffold10246 ScafM INDEL 0020.scaffold00069 153003 15 AGAGCTTTTGTTTTC ............... scaffold10246 Both SNP 0020.scaffold00069 153124 1 C A scaffold10246 Both SNP 0020.scaffold00069 153171 1 T G scaffold10246 Both SNP 0020.scaffold00069 153173 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 153296 1 C T scaffold10246 ReadM SNP 0020.scaffold00069 153467 1 G A - ScafM SNP 0020.scaffold00069 153913 1 T C scaffold10246 Both SNP 0020.scaffold00069 153926 1 A G scaffold10246 Both SNP 0020.scaffold00069 153949 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 153979 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 154041 1 G T scaffold10246 ScafM INDEL 0020.scaffold00069 154043 2 TT .C scaffold10246 ScafM SNP 0020.scaffold00069 154071 1 G C scaffold10246 Both SNP 0020.scaffold00069 154099 1 G A scaffold10246 Both SNP 0020.scaffold00069 154104 1 G A scaffold10246 Both SNP 0020.scaffold00069 154156 1 G C scaffold10246 Both SNP 0020.scaffold00069 154193 1 C T scaffold10246 Both SNP 0020.scaffold00069 154225 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 154309 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 154627 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 154639 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 155061 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 155069 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 155077 2 GG AA scaffold10246 ScafM SNP 0020.scaffold00069 155113 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 155142 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 155144 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 155170 1 T A scaffold10246 ReadM SNP 0020.scaffold00069 155446 1 C T - ReadM SNP 0020.scaffold00069 155513 1 G A - ScafM SNP 0020.scaffold00069 156231 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 156253 2 AT GG scaffold10246 ScafM SNP 0020.scaffold00069 156267 1 C A scaffold10246 ScafM INDEL 0020.scaffold00069 156289 1 A . scaffold10246 ScafM SNP 0020.scaffold00069 156514 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 156544 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 156787 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 156791 5 ..... AAATT scaffold10246 ScafM SNP 0020.scaffold00069 156809 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 156822 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 156839 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 157772 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 157775 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 157786 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 157845 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 157851 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 158190 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 158816 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 158818 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 158838 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 158844 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 158854 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 158856 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 158858 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 158918 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 158922 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 158948 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 158953 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 158957 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 158969 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 158981 3 ... GCA scaffold10246 ScafM SNP 0020.scaffold00069 158982 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 158993 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 158997 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 159017 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 159024 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159026 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 159083 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 159109 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159116 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 159134 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 159153 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159156 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159177 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 159189 1 C T scaffold10246 ScafM INDEL 0020.scaffold00069 159220 1 . A scaffold10246 ScafM SNP 0020.scaffold00069 159222 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159244 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 159252 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159275 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159302 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159309 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159320 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 159333 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159357 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 159372 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 159393 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159424 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159437 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159443 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 159449 2 AT CC scaffold10246 ScafM SNP 0020.scaffold00069 159472 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 159478 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 159612 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 159753 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 160079 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 160110 6 ...... TTTTTT scaffold10246 ScafM SNP 0020.scaffold00069 160115 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 160121 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 160138 2 CA .T scaffold10246 ScafM SNP 0020.scaffold00069 160208 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 160217 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 160229 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 160237 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 160253 1 A G scaffold10246 ReadM SNP 0020.scaffold00069 161642 1 T C - ReadM INDEL 0020.scaffold00069 162321 1 A . - ReadM SNP 0020.scaffold00069 162477 1 G T - Both SNP 0020.scaffold00069 162935 1 T G scaffold10246 Both SNP 0020.scaffold00069 163112 1 C T scaffold10246 Both SNP 0020.scaffold00069 163264 1 T G scaffold10246 Both SNP 0020.scaffold00069 163477 1 A C scaffold10246 Both SNP 0020.scaffold00069 163500 1 G A scaffold10246 Both SNP 0020.scaffold00069 163574 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 163618 1 T A scaffold10246 Both SNP 0020.scaffold00069 163640 1 G T scaffold10246 Both SNP 0020.scaffold00069 163644 1 C T scaffold10246 Both SNP 0020.scaffold00069 163849 1 T A scaffold10246 Both SNP 0020.scaffold00069 163891 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 163923 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 163956 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 163961 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 164027 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 164049 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 164079 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 164081 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 164095 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 164109 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 164111 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 164226 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 164605 1 A C scaffold10246 ScafM INDEL 0020.scaffold00069 164629 1 A . scaffold10246 ScafM INDEL 0020.scaffold00069 164647 1 . A scaffold10246 ScafM SNP 0020.scaffold00069 164665 1 T C scaffold10246 Both SNP 0020.scaffold00069 164722 1 A T scaffold10246 Both SNP 0020.scaffold00069 164737 1 G T scaffold10246 Both SNP 0020.scaffold00069 164762 1 A G scaffold10246 Both SNP 0020.scaffold00069 164813 1 G T scaffold10246 Both SNP 0020.scaffold00069 164831 1 G A scaffold10246 Both SNP 0020.scaffold00069 164944 1 C T scaffold10246 Both SNP 0020.scaffold00069 165019 1 G T scaffold10246 Both INDEL 0020.scaffold00069 165077 1 A . scaffold10246 Both SNP 0020.scaffold00069 165094 1 C T scaffold10246 Both SNP 0020.scaffold00069 165132 1 G C scaffold10246 Both SNP 0020.scaffold00069 165365 1 T A scaffold10246 Both SNP 0020.scaffold00069 165386 1 T A scaffold10246 Both SNP 0020.scaffold00069 165520 1 G C scaffold10246 Both SNP 0020.scaffold00069 165566 1 A C scaffold10246 Both SNP 0020.scaffold00069 165568 1 A C scaffold10246 Both SNP 0020.scaffold00069 165656 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 165689 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 165736 3 ... TGT scaffold10246 Both SNP 0020.scaffold00069 165797 1 A T scaffold10246 Both SNP 0020.scaffold00069 165834 1 A T scaffold10246 Both SNP 0020.scaffold00069 165870 1 A C scaffold10246 Both SNP 0020.scaffold00069 165900 1 C T scaffold10246 Both SNP 0020.scaffold00069 165984 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 165989 1 T . scaffold10246 ScafM SNP 0020.scaffold00069 166006 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 166015 1 A C scaffold10246 Both SNP 0020.scaffold00069 166090 1 G A scaffold10246 Both SNP 0020.scaffold00069 166146 1 C T scaffold10246 Both SNP 0020.scaffold00069 166259 1 C T scaffold10246 Both SNP 0020.scaffold00069 166358 1 C T scaffold10246 Both SNP 0020.scaffold00069 166445 1 C A scaffold10246 Both SNP 0020.scaffold00069 166530 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 166579 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 166583 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 166591 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 166609 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 166628 2 .. GT scaffold10246 ScafM INDEL 0020.scaffold00069 166630 10 .......... ATTTTGGGGG scaffold10246 ScafM INDEL 0020.scaffold00069 166632 1 . T scaffold10246 ScafM INDEL 0020.scaffold00069 166634 3 ... GAG scaffold10246 Both SNP 0020.scaffold00069 166710 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 166732 1 G A scaffold10246 Both SNP 0020.scaffold00069 166750 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 166819 2 TG CA scaffold10246 Both SNP 0020.scaffold00069 166835 1 G A scaffold10246 Both SNP 0020.scaffold00069 166868 1 A G scaffold10246 Both SNP 0020.scaffold00069 166892 1 A G scaffold10246 Both SNP 0020.scaffold00069 166932 1 T C scaffold10246 Both SNP 0020.scaffold00069 167074 1 C A scaffold10246 Both SNP 0020.scaffold00069 167100 1 C T scaffold10246 Both SNP 0020.scaffold00069 167113 1 T C scaffold10246 Both SNP 0020.scaffold00069 167133 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 167182 1 T C scaffold10246 Both SNP 0020.scaffold00069 167198 1 G A scaffold10246 Both INDEL 0020.scaffold00069 167227 1 G . scaffold10246 Both SNP 0020.scaffold00069 167243 1 G A scaffold10246 Both SNP 0020.scaffold00069 167341 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 167351 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 167357 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 167361 1 C T scaffold10246 Both SNP 0020.scaffold00069 167488 1 T C scaffold10246 Both SNP 0020.scaffold00069 167534 1 G A scaffold10246 Both SNP 0020.scaffold00069 167567 1 T G scaffold10246 Both SNP 0020.scaffold00069 167583 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 167596 1 T C scaffold10246 Both INDEL 0020.scaffold00069 167642 2 .. TC scaffold10246 Both SNP 0020.scaffold00069 167649 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 167755 1 T G scaffold10246 Both SNP 0020.scaffold00069 167819 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 167868 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 167946 2 CA TG scaffold10246 Both SNP 0020.scaffold00069 168093 1 A G scaffold10246 Both INDEL 0020.scaffold00069 168096 2 TT .. scaffold10246 Both SNP 0020.scaffold00069 168141 1 A G scaffold10246 Both SNP 0020.scaffold00069 168196 1 C T scaffold10246 Both SNP 0020.scaffold00069 168360 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 168396 1 A G scaffold10246 Both SNP 0020.scaffold00069 168417 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 168502 1 C T scaffold10246 ScafM INDEL 0020.scaffold00069 168511 1 . T scaffold10246 ScafM INDEL 0020.scaffold00069 168520 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 168555 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 168583 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 168604 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 168733 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 168800 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 168855 25 ......................... ATCATGGCTTCCAAAATTTGAAAAG scaffold10246 ScafM SNP 0020.scaffold00069 168866 2 CC GT scaffold10246 ScafM SNP 0020.scaffold00069 168941 1 T G scaffold10246 ScafM SNP 0020.scaffold00069 168959 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 168964 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 168986 2 AT GG scaffold10246 ScafM SNP 0020.scaffold00069 169020 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 169030 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 169041 1 T C scaffold10246 Both SNP 0020.scaffold00069 169086 1 A G scaffold10246 Both SNP 0020.scaffold00069 169143 1 T G scaffold10246 Both SNP 0020.scaffold00069 169207 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 169254 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 169265 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 169267 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 169269 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 169275 1 A T scaffold10246 Both SNP 0020.scaffold00069 169306 1 T C scaffold10246 Both SNP 0020.scaffold00069 169313 1 G T scaffold10246 Both SNP 0020.scaffold00069 169373 1 C G scaffold10246 Both SNP 0020.scaffold00069 169590 1 C G scaffold10246 Both SNP 0020.scaffold00069 169650 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 169668 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 169670 1 C T scaffold10246 Both SNP 0020.scaffold00069 169710 1 G A scaffold10246 Both SNP 0020.scaffold00069 169746 1 A G scaffold10246 Both SNP 0020.scaffold00069 169884 1 G T scaffold10246 Both INDEL 0020.scaffold00069 169903 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 169907 1 G T scaffold10246 Both SNP 0020.scaffold00069 169928 1 A G scaffold10246 Both SNP 0020.scaffold00069 170124 1 C G scaffold10246 Both SNP 0020.scaffold00069 170195 1 C T scaffold10246 Both SNP 0020.scaffold00069 170251 1 G A scaffold10246 Both SNP 0020.scaffold00069 170253 1 G T scaffold10246 Both SNP 0020.scaffold00069 170296 1 A G scaffold10246 Both SNP 0020.scaffold00069 170328 1 A T scaffold10246 Both SNP 0020.scaffold00069 170334 1 C A scaffold10246 Both SNP 0020.scaffold00069 170511 1 C T scaffold10246 Both SNP 0020.scaffold00069 170593 1 T C scaffold10246 Both SNP 0020.scaffold00069 170641 1 A G scaffold10246 Both SNP 0020.scaffold00069 170680 1 G A scaffold10246 Both SNP 0020.scaffold00069 170696 1 C T scaffold10246 Both SNP 0020.scaffold00069 170746 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 170790 2 AC CT scaffold10246 ScafM SNP 0020.scaffold00069 170797 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 170812 1 C T scaffold10246 Both INDEL 0020.scaffold00069 170852 1 . A scaffold10246 Both SNP 0020.scaffold00069 170873 1 T G scaffold10246 Both SNP 0020.scaffold00069 170908 1 A G scaffold10246 Both SNP 0020.scaffold00069 171021 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 171047 1 A T scaffold10246 Both SNP 0020.scaffold00069 171057 1 G T scaffold10246 Both SNP 0020.scaffold00069 171114 1 G A scaffold10246 Both SNP 0020.scaffold00069 171124 1 C T scaffold10246 Both SNP 0020.scaffold00069 171198 1 A C scaffold10246 Both SNP 0020.scaffold00069 171203 1 A T scaffold10246 Both SNP 0020.scaffold00069 171222 1 G C scaffold10246 Both SNP 0020.scaffold00069 171244 1 C T scaffold10246 Both SNP 0020.scaffold00069 171255 1 G A scaffold10246 Both SNP 0020.scaffold00069 171360 1 G C scaffold10246 Both SNP 0020.scaffold00069 171364 1 G T scaffold10246 Both SNP 0020.scaffold00069 171409 1 T A scaffold10246 Both SNP 0020.scaffold00069 171524 1 C T scaffold10246 Both SNP 0020.scaffold00069 171573 1 A G scaffold10246 Both SNP 0020.scaffold00069 171594 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 171620 1 . A scaffold10246 ScafM SNP 0020.scaffold00069 171630 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 171637 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 171657 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 171659 1 T C scaffold10246 Both SNP 0020.scaffold00069 171674 1 C T scaffold10246 Both SNP 0020.scaffold00069 171710 1 A T scaffold10246 Both SNP 0020.scaffold00069 171794 1 T C scaffold10246 Both SNP 0020.scaffold00069 171809 1 A C scaffold10246 ScafM INDEL 0020.scaffold00069 171836 1 G . scaffold10246 ScafM SNP 0020.scaffold00069 171843 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 171871 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 171886 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 171894 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 171934 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 171942 1 A G scaffold10246 Both SNP 0020.scaffold00069 171949 1 C A scaffold10246 Both SNP 0020.scaffold00069 172012 1 T C scaffold10246 Both INDEL 0020.scaffold00069 172014 1 . C scaffold10246 ScafM SNP 0020.scaffold00069 172083 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 172086 1 G A scaffold10246 Both SNP 0020.scaffold00069 172093 1 C A scaffold10246 ReadM SNP 0020.scaffold00069 172147 1 A G - ReadM SNP 0020.scaffold00069 172158 1 G T - ReadM SNP 0020.scaffold00069 172238 1 A G - ReadM SNP 0020.scaffold00069 172247 1 G A - ReadM SNP 0020.scaffold00069 172267 1 T C - Both SNP 0020.scaffold00069 172394 1 G A scaffold10246 Both SNP 0020.scaffold00069 172456 1 T A scaffold10246 ScafM INDEL 0020.scaffold00069 172522 3 ... CTT scaffold10246 ReadM SNP 0020.scaffold00069 172544 1 A G - Both SNP 0020.scaffold00069 172641 1 A T scaffold10246 Both SNP 0020.scaffold00069 172651 1 G C scaffold10246 Both SNP 0020.scaffold00069 172674 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 172698 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 172711 1 C T scaffold10246 Both SNP 0020.scaffold00069 172733 1 C G scaffold10246 Both SNP 0020.scaffold00069 172755 1 T C scaffold10246 Both SNP 0020.scaffold00069 172806 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 172864 4 GGAG .... scaffold10246 ScafM INDEL 0020.scaffold00069 172870 1 G . scaffold10246 ScafM INDEL 0020.scaffold00069 172872 2 GC .. scaffold10246 Both SNP 0020.scaffold00069 172970 1 C T scaffold10246 Both SNP 0020.scaffold00069 173028 1 C G scaffold10246 Both SNP 0020.scaffold00069 173064 1 C A scaffold10246 Both SNP 0020.scaffold00069 173116 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 173134 2 TT GC scaffold10246 Both SNP 0020.scaffold00069 173152 1 T C scaffold10246 Both SNP 0020.scaffold00069 173255 1 T G scaffold10246 Both SNP 0020.scaffold00069 173261 1 A G scaffold10246 Both SNP 0020.scaffold00069 173287 1 C A scaffold10246 Both SNP 0020.scaffold00069 173315 1 T C scaffold10246 Both SNP 0020.scaffold00069 173335 1 G T scaffold10246 ScafM INDEL 0020.scaffold00069 173385 4 .... ATGT scaffold10246 ScafM SNP 0020.scaffold00069 173386 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 173388 2 CC AA scaffold10246 ScafM INDEL 0020.scaffold00069 173390 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 173461 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 173469 1 C T scaffold10246 ReadM SNP 0020.scaffold00069 173489 1 C A - ReadM SNP 0020.scaffold00069 173511 1 C T - ReadM SNP 0020.scaffold00069 173552 1 T C - Both SNP 0020.scaffold00069 173785 1 A G scaffold10246 Both SNP 0020.scaffold00069 173896 1 C A scaffold10246 ReadM INDEL 0020.scaffold00069 174092 1 T . - ScafM INDEL 0020.scaffold00069 174092 2 TC .A scaffold10246 Both SNP 0020.scaffold00069 174238 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 174370 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 174379 2 AA TT scaffold10246 ScafM SNP 0020.scaffold00069 174383 1 A G scaffold10246 ScafM INDEL 0020.scaffold00069 174419 1 A . scaffold10246 ScafM INDEL 0020.scaffold00069 174454 2 TT .. scaffold10246 ScafM INDEL 0020.scaffold00069 174502 3 ... AAC scaffold10246 ScafM SNP 0020.scaffold00069 174547 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 174557 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 174565 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 174572 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 174590 1 C T scaffold10246 Both INDEL 0020.scaffold00069 174618 1 . A scaffold10246 Both SNP 0020.scaffold00069 174622 1 T A scaffold10246 Both SNP 0020.scaffold00069 174677 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 174859 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 174868 3 ... TTC scaffold10246 ScafM SNP 0020.scaffold00069 174902 1 G T scaffold10246 Both SNP 0020.scaffold00069 174930 1 T G scaffold10246 Both SNP 0020.scaffold00069 174935 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 175126 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 175131 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 175147 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 175149 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 175161 1 C G scaffold10246 Both SNP 0020.scaffold00069 175186 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 175223 2 TT GC scaffold10246 Both SNP 0020.scaffold00069 175479 1 A G scaffold10246 Both SNP 0020.scaffold00069 175531 1 C G scaffold10246 Both SNP 0020.scaffold00069 175564 1 T C scaffold10246 Both SNP 0020.scaffold00069 175599 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 175818 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 175821 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 175827 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 175847 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 175849 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 175861 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 175868 1 T G scaffold10246 ScafM INDEL 0020.scaffold00069 175871 5 ATATC ..... scaffold10246 ScafM INDEL 0020.scaffold00069 175905 1 A . scaffold10246 ScafM SNP 0020.scaffold00069 175962 1 G T scaffold10246 ScafM INDEL 0020.scaffold00069 175966 6 ...... ATATGC scaffold10246 Both SNP 0020.scaffold00069 175995 1 T C scaffold10246 Both SNP 0020.scaffold00069 176083 1 A T scaffold10246 Both SNP 0020.scaffold00069 176087 1 A G scaffold10246 Both SNP 0020.scaffold00069 176158 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 176192 2 TG CA scaffold10246 ScafM SNP 0020.scaffold00069 176197 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 176225 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 176227 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 176238 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 176243 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 176246 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 176266 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 176277 1 A T scaffold10246 Both SNP 0020.scaffold00069 176325 1 T G scaffold10246 Both SNP 0020.scaffold00069 176389 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 176407 5 ..... AACAA scaffold10246 ScafM INDEL 0020.scaffold00069 176461 1 . C scaffold10246 ScafM SNP 0020.scaffold00069 176473 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 176483 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 176504 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 176507 1 G A scaffold10246 Both SNP 0020.scaffold00069 176520 1 G A scaffold10246 Both SNP 0020.scaffold00069 176620 1 G C scaffold10246 Both SNP 0020.scaffold00069 176679 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 176715 2 GC CT scaffold10246 ScafM INDEL 0020.scaffold00069 176720 1 A . scaffold10246 ScafM SNP 0020.scaffold00069 176749 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 176755 2 GT AC scaffold10246 Both SNP 0020.scaffold00069 176791 1 A G scaffold10246 Both SNP 0020.scaffold00069 176972 1 G A scaffold10246 Both SNP 0020.scaffold00069 177072 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 177154 3 ... TTT scaffold10246 Both SNP 0020.scaffold00069 177247 1 A G scaffold10246 Both SNP 0020.scaffold00069 177489 1 T A scaffold10246 ScafM INDEL 0020.scaffold00069 177531 8 GTGGTAAA ........ scaffold10246 ScafM INDEL 0020.scaffold00069 177541 3 GCC ... scaffold10246 ScafM SNP 0020.scaffold00069 177545 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 177548 2 AA .. scaffold10246 ScafM INDEL 0020.scaffold00069 177552 3 GAA ... scaffold10246 ScafM INDEL 0020.scaffold00069 177557 4 CCTC .... scaffold10246 ScafM SNP 0020.scaffold00069 177564 1 G T scaffold10246 Both SNP 0020.scaffold00069 177743 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 178059 1 C A scaffold10246 ScafM SNP 0020.scaffold00069 178172 1 C T scaffold10246 Both SNP 0020.scaffold00069 178306 1 A G scaffold10246 Both SNP 0020.scaffold00069 178676 1 G A scaffold10246 Both SNP 0020.scaffold00069 178803 1 T C scaffold10246 ReadM SNP 0020.scaffold00069 179012 1 T C - ReadM SNP 0020.scaffold00069 179017 1 T C - ReadM SNP 0020.scaffold00069 179237 1 T A - ReadM SNP 0020.scaffold00069 179360 1 C A - ReadM SNP 0020.scaffold00069 179512 1 T C - ReadM SNP 0020.scaffold00069 179767 1 G A - ReadM SNP 0020.scaffold00069 179810 1 C A - ReadM SNP 0020.scaffold00069 179879 1 C T - ReadM INDEL 0020.scaffold00069 179891 1 . C - ReadM SNP 0020.scaffold00069 180019 1 T C - ReadM SNP 0020.scaffold00069 180048 1 G A - ReadM SNP 0020.scaffold00069 180055 1 G A - ReadM SNP 0020.scaffold00069 180247 1 G A - ReadM SNP 0020.scaffold00069 180288 1 C G - ReadM SNP 0020.scaffold00069 180305 1 G A - ReadM SNP 0020.scaffold00069 180381 1 A G - ReadM SNP 0020.scaffold00069 180397 1 G A - ReadM INDEL 0020.scaffold00069 180509 1 T . - ReadM SNP 0020.scaffold00069 180693 1 T A - ReadM SNP 0020.scaffold00069 181000 1 T C - ReadM SNP 0020.scaffold00069 181038 1 A G - ReadM SNP 0020.scaffold00069 181238 1 A T - ReadM SNP 0020.scaffold00069 181267 1 A C - ReadM SNP 0020.scaffold00069 181351 1 A C - ReadM SNP 0020.scaffold00069 181386 1 A C - ReadM SNP 0020.scaffold00069 181420 1 C A - ReadM SNP 0020.scaffold00069 181475 1 A G - ReadM SNP 0020.scaffold00069 181506 1 G T - Both SNP 0020.scaffold00069 181548 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 181562 1 A G scaffold10246 ReadM SNP 0020.scaffold00069 181693 1 C T - ReadM SNP 0020.scaffold00069 181719 1 T G - ReadM SNP 0020.scaffold00069 181785 1 A G - ReadM SNP 0020.scaffold00069 181824 1 G A - ReadM SNP 0020.scaffold00069 181905 1 T C - ReadM SNP 0020.scaffold00069 182084 1 T A - ReadM INDEL 0020.scaffold00069 182181 1 . T - ReadM SNP 0020.scaffold00069 182202 1 A C - ReadM SNP 0020.scaffold00069 182369 1 A G - ReadM SNP 0020.scaffold00069 182500 1 T C - ReadM SNP 0020.scaffold00069 182566 1 A G - ReadM SNP 0020.scaffold00069 182650 1 G A - ReadM INDEL 0020.scaffold00069 182816 3 ... TGA - Both SNP 0020.scaffold00069 182936 1 G A scaffold10246 Both SNP 0020.scaffold00069 183014 1 A T scaffold10246 ReadM SNP 0020.scaffold00069 183030 1 C A - ReadM SNP 0020.scaffold00069 183069 1 C T - ReadM INDEL 0020.scaffold00069 183250 1 A . - ReadM SNP 0020.scaffold00069 183313 1 T C - ReadM INDEL 0020.scaffold00069 183375 1 . T - ReadM SNP 0020.scaffold00069 183453 1 A G - ReadM SNP 0020.scaffold00069 183709 1 T C - ReadM SNP 0020.scaffold00069 183741 1 C T - Both SNP 0020.scaffold00069 183815 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 183820 1 A G scaffold10246 ReadM SNP 0020.scaffold00069 183894 1 C G - Both SNP 0020.scaffold00069 184043 1 A G scaffold10246 Both SNP 0020.scaffold00069 184095 1 C T scaffold10246 ReadM SNP 0020.scaffold00069 184361 1 A C - ReadM SNP 0020.scaffold00069 184406 1 T C - ReadM SNP 0020.scaffold00069 184636 1 G A - ReadM INDEL 0020.scaffold00069 184655 2 .. TG - ReadM SNP 0020.scaffold00069 184894 1 C A - ReadM SNP 0020.scaffold00069 184926 1 A G - ReadM SNP 0020.scaffold00069 184942 1 G A - ScafM INDEL 0020.scaffold00069 185184 4 .... CGTA scaffold10246 ScafM SNP 0020.scaffold00069 185193 1 C G scaffold10246 ScafM SNP 0020.scaffold00069 185202 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185247 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185256 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 185274 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 185288 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185293 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 185297 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185311 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185314 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 185325 1 G C scaffold10246 ScafM SNP 0020.scaffold00069 185340 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 185345 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 185365 1 G T scaffold10246 Both SNP 0020.scaffold00069 185409 1 A G scaffold10246 Both SNP 0020.scaffold00069 185477 1 C T scaffold10246 Both SNP 0020.scaffold00069 185544 1 G A scaffold10246 Both SNP 0020.scaffold00069 185625 1 T C scaffold10246 Both SNP 0020.scaffold00069 185670 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 185833 2 AG TC scaffold10246 ScafM INDEL 0020.scaffold00069 185936 2 .. GC scaffold10246 ScafM INDEL 0020.scaffold00069 185938 3 ... AAG scaffold10246 ScafM SNP 0020.scaffold00069 185946 1 G A scaffold10246 ScafM INDEL 0020.scaffold00069 185953 1 . G scaffold10246 ScafM SNP 0020.scaffold00069 185964 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 185972 1 . A scaffold10246 ScafM INDEL 0020.scaffold00069 186011 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 186020 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 186061 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 186066 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 186069 1 T C scaffold10246 Both INDEL 0020.scaffold00069 186116 1 A . scaffold10246 ScafM SNP 0020.scaffold00069 186118 1 A C scaffold10246 Both SNP 0020.scaffold00069 186140 1 C T scaffold10246 Both SNP 0020.scaffold00069 186276 1 A G scaffold10246 ReadM SNP 0020.scaffold00069 186299 1 T C - ReadM SNP 0020.scaffold00069 186377 1 A G - ReadM SNP 0020.scaffold00069 186398 1 A G - ReadM SNP 0020.scaffold00069 186504 1 A G - ReadM SNP 0020.scaffold00069 186540 1 G C - ReadM SNP 0020.scaffold00069 186585 1 G C - ReadM SNP 0020.scaffold00069 186650 1 C T - ReadM SNP 0020.scaffold00069 186680 1 G A - ReadM INDEL 0020.scaffold00069 186828 1 . G - ReadM SNP 0020.scaffold00069 187073 1 G A - ReadM SNP 0020.scaffold00069 187221 1 A T - ReadM SNP 0020.scaffold00069 187315 1 C T - ReadM SNP 0020.scaffold00069 187340 1 G A - Both SNP 0020.scaffold00069 187445 1 C G scaffold10246 Both SNP 0020.scaffold00069 187463 1 G A scaffold10246 Both SNP 0020.scaffold00069 187487 1 G A scaffold10246 Both SNP 0020.scaffold00069 187516 1 G A scaffold10246 Both SNP 0020.scaffold00069 187528 1 G A scaffold10246 Both SNP 0020.scaffold00069 187603 1 T C scaffold10246 Both SNP 0020.scaffold00069 187609 1 C T scaffold10246 Both SNP 0020.scaffold00069 187752 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 187764 2 TC GG scaffold10246 ScafM SNP 0020.scaffold00069 187799 1 T C scaffold10246 ScafM SNP 0020.scaffold00069 187820 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 187823 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 187833 1 A G scaffold10246 ScafM SNP 0020.scaffold00069 187841 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 187853 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 187862 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 187876 1 C T scaffold10246 ScafM SNP 0020.scaffold00069 187901 1 C T scaffold10246 Both SNP 0020.scaffold00069 187926 1 T C scaffold10246 Both SNP 0020.scaffold00069 187994 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 188042 1 A G scaffold10246 Both SNP 0020.scaffold00069 188155 1 G T scaffold10246 ScafM SNP 0020.scaffold00069 188240 1 G A scaffold10246 ScafM SNP 0020.scaffold00069 188280 1 T C scaffold10246 ScafM INDEL 0020.scaffold00069 188319 1 . T scaffold10246 ScafM SNP 0020.scaffold00069 188321 1 A T scaffold10246 ScafM SNP 0020.scaffold00069 188324 1 A T scaffold10246 ScafM INDEL 0020.scaffold00069 188338 1 T . scaffold10246 ScafM SNP 0020.scaffold00069 188341 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 188367 1 T A scaffold10246 ScafM SNP 0020.scaffold00069 188407 1 A C scaffold10246 ScafM SNP 0020.scaffold00069 209847 1 A G scaffold1232 Both SNP 0020.scaffold00069 212879 1 G A scaffold1232 ReadM SNP 0020.scaffold00069 213628 1 C T - Both SNP 0020.scaffold00069 214019 1 C T scaffold1232 ReadM SNP 0020.scaffold00069 214091 1 A G - ReadM SNP 0020.scaffold00069 214441 1 T C - ReadM INDEL 0020.scaffold00069 215947 1 A . - ReadM SNP 0020.scaffold00069 216247 1 T C - ScafM SNP 0020.scaffold00069 216800 1 C A scaffold1232 ReadM INDEL 0020.scaffold00069 217564 2 AG .. - ReadM SNP 0020.scaffold00069 217580 1 A T - Both SNP 0020.scaffold00069 218152 1 G C scaffold1232 Both SNP 0020.scaffold00069 218192 1 G A scaffold1232 Both SNP 0020.scaffold00069 218254 1 A G scaffold1232 Both SNP 0020.scaffold00069 218530 1 A G scaffold1232 ReadM SNP 0020.scaffold00069 218716 1 C T - ReadM SNP 0020.scaffold00069 218991 1 C T - ReadM SNP 0020.scaffold00069 219535 1 T A - ReadM SNP 0020.scaffold00069 219594 1 G A - ReadM SNP 0020.scaffold00069 219898 1 T C - ReadM SNP 0020.scaffold00069 220563 1 C T - Both SNP 0020.scaffold00069 222482 1 T C scaffold1232 Both SNP 0020.scaffold00069 223956 1 A T scaffold1232 Both SNP 0020.scaffold00069 224216 1 C T scaffold1232 Both SNP 0020.scaffold00069 224384 1 G A scaffold1232 ReadM SNP 0020.scaffold00069 224621 1 C A - Both SNP 0020.scaffold00069 225067 1 T C scaffold1232 ReadM SNP 0020.scaffold00069 226320 1 T A - ReadM SNP 0020.scaffold00069 226428 1 G A - ReadM SNP 0020.scaffold00069 226586 1 A G - ReadM SNP 0020.scaffold00069 226914 1 C T - ReadM SNP 0020.scaffold00069 228046 1 G A - ReadM SNP 0020.scaffold00069 228668 1 G A - ReadM SNP 0020.scaffold00069 228697 1 C A - ReadM SNP 0020.scaffold00069 229003 1 A T - ReadM SNP 0020.scaffold00069 229322 1 T G - ReadM SNP 0020.scaffold00069 229509 1 T C - ReadM SNP 0020.scaffold00069 229611 1 A G - ScafM SNP 0020.scaffold00069 229981 2 TT AA scaffold1232 Both SNP 0020.scaffold00069 230569 1 A T scaffold1232 Both SNP 0020.scaffold00069 231005 1 T A scaffold1232 Both SNP 0020.scaffold00069 231131 1 A G scaffold1232 Both SNP 0020.scaffold00069 231149 1 T C scaffold1232 Both SNP 0020.scaffold00069 231211 1 C T scaffold1232 ScafM INDEL 0020.scaffold00069 231794 4 AAAC .... scaffold1232 Both SNP 0020.scaffold00069 231930 1 G A scaffold1232 Both SNP 0020.scaffold00069 232031 1 T G scaffold1232 ReadM SNP 0020.scaffold00069 232315 1 A C - ReadM SNP 0020.scaffold00069 232342 1 C T - Both SNP 0020.scaffold00069 232753 1 A T scaffold1232 Both SNP 0020.scaffold00069 232780 1 A G scaffold1232 Both SNP 0020.scaffold00069 232783 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 232806 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 232825 1 A C scaffold1232 ScafM SNP 0020.scaffold00069 232856 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 232865 2 GA AT scaffold1232 Both SNP 0020.scaffold00069 232878 1 C T scaffold1232 Both SNP 0020.scaffold00069 232933 1 A G scaffold1232 Both SNP 0020.scaffold00069 232944 1 T G scaffold1232 Both SNP 0020.scaffold00069 232996 1 C A scaffold1232 Both SNP 0020.scaffold00069 233025 1 T C scaffold1232 Both SNP 0020.scaffold00069 233047 1 C T scaffold1232 Both SNP 0020.scaffold00069 233115 1 T C scaffold1232 Both SNP 0020.scaffold00069 233217 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 233374 2 TA CG scaffold1232 Both SNP 0020.scaffold00069 233461 1 C T scaffold1232 Both SNP 0020.scaffold00069 233506 1 G C scaffold1232 ScafM SNP 0020.scaffold00069 233563 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 233566 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 233577 2 AG TT scaffold1232 Both SNP 0020.scaffold00069 233666 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 233691 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 234009 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 234011 1 G A scaffold1232 Both SNP 0020.scaffold00069 234058 1 C T scaffold1232 Both SNP 0020.scaffold00069 234068 1 C T scaffold1232 Both SNP 0020.scaffold00069 234093 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 234338 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 234400 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 234408 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 234420 1 A C scaffold1232 ScafM SNP 0020.scaffold00069 234430 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 234486 1 A G scaffold1232 ScafM INDEL 0020.scaffold00069 234523 8 GAACAACT ........ scaffold1232 ScafM SNP 0020.scaffold00069 234558 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 234596 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 234776 1 A G scaffold1232 Both SNP 0020.scaffold00069 234816 1 T G scaffold1232 Both SNP 0020.scaffold00069 234880 1 C T scaffold1232 Both SNP 0020.scaffold00069 234925 1 T C scaffold1232 Both SNP 0020.scaffold00069 234928 1 T C scaffold1232 Both SNP 0020.scaffold00069 235021 1 A G scaffold1232 Both SNP 0020.scaffold00069 235060 1 A G scaffold1232 Both SNP 0020.scaffold00069 235107 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 235131 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 235140 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 235607 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 235624 2 GT AA scaffold1232 ScafM SNP 0020.scaffold00069 235931 2 TA AG scaffold1232 Both SNP 0020.scaffold00069 236023 1 G T scaffold1232 ScafM SNP 0020.scaffold00069 236108 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 236142 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 236164 1 G C scaffold1232 ScafM SNP 0020.scaffold00069 236189 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 236213 1 A C scaffold1232 ScafM INDEL 0020.scaffold00069 236226 1 T . scaffold1232 ScafM SNP 0020.scaffold00069 236233 2 CT AG scaffold1232 ReadM SNP 0020.scaffold00069 237256 1 T C - Both SNP 0020.scaffold00069 237703 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 237743 1 G C scaffold1232 ScafM INDEL 0020.scaffold00069 237749 2 .. GT scaffold1232 ScafM INDEL 0020.scaffold00069 237751 1 . C scaffold1232 ScafM INDEL 0020.scaffold00069 237754 3 ... AAA scaffold1232 ScafM INDEL 0020.scaffold00069 237758 1 . A scaffold1232 ScafM SNP 0020.scaffold00069 237761 1 C G scaffold1232 ScafM SNP 0020.scaffold00069 237771 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 237802 1 A C scaffold1232 ScafM SNP 0020.scaffold00069 237828 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 237835 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 237979 1 A C scaffold1232 ScafM INDEL 0020.scaffold00069 238054 1 . T scaffold1232 ScafM SNP 0020.scaffold00069 238083 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 238105 1 G T scaffold1232 ScafM SNP 0020.scaffold00069 238110 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 239182 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 239223 1 G C scaffold1232 ScafM INDEL 0020.scaffold00069 239258 1 C . scaffold1232 ScafM SNP 0020.scaffold00069 239303 1 A T scaffold1232 ScafM SNP 0020.scaffold00069 239314 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 239642 2 AC GT scaffold1232 ScafM INDEL 0020.scaffold00069 239682 2 AT .. scaffold1232 ScafM INDEL 0020.scaffold00069 239687 1 . A scaffold1232 ScafM SNP 0020.scaffold00069 239689 1 C A scaffold1232 Both SNP 0020.scaffold00069 239825 1 C T scaffold1232 ScafM INDEL 0020.scaffold00069 239892 3 ... AAA scaffold1232 ScafM SNP 0020.scaffold00069 239894 1 C A scaffold1232 ScafM SNP 0020.scaffold00069 239931 1 G C scaffold1232 ReadM SNP 0020.scaffold00069 240249 1 C T - ScafM INDEL 0020.scaffold00069 240633 2 .. TC scaffold1232 ScafM SNP 0020.scaffold00069 240646 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 240652 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 240669 1 G C scaffold1232 ScafM INDEL 0020.scaffold00069 240677 2 .. TA scaffold1232 ScafM SNP 0020.scaffold00069 240717 1 C G scaffold1232 ScafM SNP 0020.scaffold00069 240753 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 240806 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 242370 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 242378 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 242380 1 A C scaffold1232 ScafM SNP 0020.scaffold00069 242388 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 242400 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 242402 1 G A scaffold1232 ScafM INDEL 0020.scaffold00069 242473 6 ...... TTATAT scaffold1232 ReadM SNP 0020.scaffold00069 243375 1 A G - ReadM SNP 0020.scaffold00069 243406 1 G A - Both INDEL 0020.scaffold00069 243472 2 .. AT scaffold1232 Both SNP 0020.scaffold00069 243504 1 A G scaffold1232 Both SNP 0020.scaffold00069 243792 1 T A scaffold1232 Both INDEL 0020.scaffold00069 243806 1 . T scaffold1232 ScafM INDEL 0020.scaffold00069 243882 3 GAA ... scaffold1232 ScafM SNP 0020.scaffold00069 243886 1 G C scaffold1232 ScafM SNP 0020.scaffold00069 243922 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 243932 1 T C scaffold1232 ScafM INDEL 0020.scaffold00069 243954 4 .... AATG scaffold1232 ScafM INDEL 0020.scaffold00069 243955 3 ... TAA scaffold1232 ScafM SNP 0020.scaffold00069 243961 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 243966 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 243986 2 TG CA scaffold1232 ScafM SNP 0020.scaffold00069 244008 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 244015 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 244019 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 244051 1 G T scaffold1232 ScafM SNP 0020.scaffold00069 244053 1 C G scaffold1232 ScafM SNP 0020.scaffold00069 244064 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 244088 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 244120 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 244125 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 244146 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 244149 2 AT GG scaffold1232 ScafM SNP 0020.scaffold00069 244152 1 A T scaffold1232 ScafM SNP 0020.scaffold00069 244159 2 GG AA scaffold1232 ReadM SNP 0020.scaffold00069 244943 1 C T - ReadM SNP 0020.scaffold00069 244949 1 T G - ReadM SNP 0020.scaffold00069 245412 1 T A - ReadM SNP 0020.scaffold00069 245436 1 T C - ReadM SNP 0020.scaffold00069 245919 1 A G - ReadM SNP 0020.scaffold00069 246039 1 G C - ReadM SNP 0020.scaffold00069 246072 1 A G - ReadM SNP 0020.scaffold00069 246411 1 A G - ReadM SNP 0020.scaffold00069 246489 1 T A - ScafM SNP 0020.scaffold00069 247017 1 A T scaffold9068 ScafM SNP 0020.scaffold00069 247029 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 247039 1 A T scaffold9068 ScafM SNP 0020.scaffold00069 247095 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 247108 2 TG GA scaffold9068 ScafM SNP 0020.scaffold00069 247120 1 G C scaffold9068 ScafM SNP 0020.scaffold00069 247122 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 247128 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 247159 1 C A scaffold9068 ScafM SNP 0020.scaffold00069 247169 1 C G scaffold9068 ScafM SNP 0020.scaffold00069 247192 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 247203 1 T C scaffold9068 ScafM SNP 0020.scaffold00069 247253 1 C A scaffold9068 ScafM SNP 0020.scaffold00069 247260 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 247278 1 C T scaffold9068 ScafM SNP 0020.scaffold00069 247298 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 247326 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 247359 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 247365 2 AA GG scaffold9068 ScafM SNP 0020.scaffold00069 247369 1 A C scaffold9068 ScafM SNP 0020.scaffold00069 247389 2 TC AT scaffold9068 ScafM SNP 0020.scaffold00069 247415 1 A C scaffold9068 ScafM SNP 0020.scaffold00069 247427 2 AA GT scaffold9068 ScafM SNP 0020.scaffold00069 247497 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 248750 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 248760 1 T G scaffold9068 ScafM SNP 0020.scaffold00069 248837 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 248843 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 248868 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 248882 1 C T scaffold9068 ScafM SNP 0020.scaffold00069 248900 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 248936 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 248942 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 248958 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 248989 1 T G scaffold9068 ScafM SNP 0020.scaffold00069 249024 2 AG GT scaffold9068 ScafM INDEL 0020.scaffold00069 249031 5 ..... TTTCT scaffold9068 ScafM INDEL 0020.scaffold00069 249038 1 . C scaffold9068 ScafM SNP 0020.scaffold00069 249047 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 249091 1 T G scaffold9068 ScafM SNP 0020.scaffold00069 249095 1 T C scaffold9068 ScafM INDEL 0020.scaffold00069 249116 1 G . scaffold9068 ScafM SNP 0020.scaffold00069 249149 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 249152 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 249170 1 C T scaffold9068 ScafM SNP 0020.scaffold00069 249181 2 CT TC scaffold9068 ScafM SNP 0020.scaffold00069 249309 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 249335 1 A G scaffold9068 ScafM INDEL 0020.scaffold00069 249373 2 .. GG scaffold9068 ScafM SNP 0020.scaffold00069 249375 1 T G scaffold9068 ScafM SNP 0020.scaffold00069 249406 1 T C scaffold9068 ScafM SNP 0020.scaffold00069 249441 1 A T scaffold9068 ScafM SNP 0020.scaffold00069 249450 1 T C scaffold9068 ReadM SNP 0020.scaffold00069 249542 1 C T - ReadM SNP 0020.scaffold00069 249566 1 C T - ReadM SNP 0020.scaffold00069 249575 1 G A - ReadM SNP 0020.scaffold00069 249668 1 C T - ReadM SNP 0020.scaffold00069 249674 1 A G - ReadM SNP 0020.scaffold00069 249698 1 A G - ScafM SNP 0020.scaffold00069 250075 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 250079 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 250100 1 G A scaffold9068 ScafM SNP 0020.scaffold00069 250111 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 250117 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 250132 1 A C scaffold9068 ScafM SNP 0020.scaffold00069 250164 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 250168 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 250188 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 250203 1 A T scaffold9068 ScafM SNP 0020.scaffold00069 250208 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 250230 1 G T scaffold9068 ScafM SNP 0020.scaffold00069 250233 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 250273 1 T A scaffold9068 ScafM SNP 0020.scaffold00069 250289 1 T C scaffold9068 ScafM SNP 0020.scaffold00069 250292 1 T C scaffold9068 ScafM SNP 0020.scaffold00069 250304 1 A G scaffold9068 ScafM SNP 0020.scaffold00069 250508 1 A T scaffold1232 ScafM SNP 0020.scaffold00069 250545 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 250547 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 250560 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 250579 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 250583 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 250590 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 250629 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 251241 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 251243 1 C G scaffold1232 ScafM SNP 0020.scaffold00069 251265 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 251269 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 251272 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 251301 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 251331 1 T A scaffold1232 ScafM SNP 0020.scaffold00069 251968 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 251980 2 TT CG scaffold1232 ScafM INDEL 0020.scaffold00069 251995 1 . A scaffold1232 ScafM SNP 0020.scaffold00069 252031 1 A C scaffold1232 ScafM INDEL 0020.scaffold00069 252052 1 . T scaffold1232 ScafM SNP 0020.scaffold00069 252059 2 GG AA scaffold1232 ScafM SNP 0020.scaffold00069 252064 1 A G scaffold1232 ScafM INDEL 0020.scaffold00069 252067 4 GTAT .... scaffold1232 ScafM SNP 0020.scaffold00069 252072 1 T C scaffold1232 ScafM INDEL 0020.scaffold00069 252075 2 TA .. scaffold1232 ScafM INDEL 0020.scaffold00069 252078 3 GTC ... scaffold1232 ScafM INDEL 0020.scaffold00069 252082 1 A . scaffold1232 ScafM SNP 0020.scaffold00069 252085 1 C G scaffold1232 ScafM INDEL 0020.scaffold00069 252088 1 G . scaffold1232 ScafM SNP 0020.scaffold00069 252105 1 C G scaffold1232 ScafM INDEL 0020.scaffold00069 252121 15 CTATTTTACGAGGGG ............... scaffold1232 ScafM INDEL 0020.scaffold00069 252158 3 CTT ... scaffold1232 ScafM INDEL 0020.scaffold00069 252162 1 C . scaffold1232 ScafM INDEL 0020.scaffold00069 252165 2 TT .. scaffold1232 ScafM INDEL 0020.scaffold00069 252181 4 ATTA .... scaffold1232 ScafM SNP 0020.scaffold00069 252190 1 A G scaffold1232 ScafM INDEL 0020.scaffold00069 252209 4 .... ATAT scaffold1232 ScafM INDEL 0020.scaffold00069 252239 1 . A scaffold1232 ScafM SNP 0020.scaffold00069 252289 1 A G scaffold1232 ScafM INDEL 0020.scaffold00069 252298 4 TTCA .... scaffold1232 ScafM SNP 0020.scaffold00069 252303 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 252320 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 252336 1 A T scaffold1232 ScafM SNP 0020.scaffold00069 252339 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 252356 2 GG AC scaffold1232 ScafM SNP 0020.scaffold00069 252412 1 T A scaffold1232 ScafM INDEL 0020.scaffold00069 252422 3 CAA ... scaffold1232 ScafM SNP 0020.scaffold00069 252443 1 T A scaffold1232 ScafM INDEL 0020.scaffold00069 252449 3 CTT ... scaffold1232 ScafM SNP 0020.scaffold00069 252454 1 C A scaffold1232 ScafM SNP 0020.scaffold00069 252470 1 G A scaffold1232 ScafM INDEL 0020.scaffold00069 252481 1 . A scaffold1232 ScafM SNP 0020.scaffold00069 252493 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 252524 3 TTA GAG scaffold1232 ScafM SNP 0020.scaffold00069 252537 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 252544 1 C G scaffold1232 ScafM SNP 0020.scaffold00069 252559 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 252561 1 A T scaffold1232 ScafM SNP 0020.scaffold00069 252566 1 C T scaffold1232 ScafM INDEL 0020.scaffold00069 252577 1 G . scaffold1232 ReadM SNP 0020.scaffold00069 256797 1 A G - ReadM SNP 0020.scaffold00069 256899 1 A G - ReadM SNP 0020.scaffold00069 259891 1 C T - ReadM SNP 0020.scaffold00069 259921 1 C T - ScafM SNP 0020.scaffold00069 264954 1 G T scaffold1232 ScafM INDEL 0020.scaffold00069 264957 3 ... TAA scaffold1232 ScafM SNP 0020.scaffold00069 264991 1 A G scaffold1232 ScafM SNP 0020.scaffold00069 265007 1 C A scaffold1232 ScafM SNP 0020.scaffold00069 265047 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 266069 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 266082 1 A C scaffold1232 ScafM SNP 0020.scaffold00069 266093 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 266105 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 266112 1 G A scaffold1232 ScafM SNP 0020.scaffold00069 266124 1 T G scaffold1232 ScafM SNP 0020.scaffold00069 266145 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 266153 1 T C scaffold1232 ScafM INDEL 0020.scaffold00069 266162 1 . T scaffold1232 ScafM SNP 0020.scaffold00069 266173 1 A G scaffold1232 ScafM INDEL 0020.scaffold00069 266185 1 . G scaffold1232 ScafM SNP 0020.scaffold00069 266235 1 C T scaffold1232 ScafM SNP 0020.scaffold00069 266282 2 AA TG scaffold1232 ScafM SNP 0020.scaffold00069 266300 1 T C scaffold1232 ScafM SNP 0020.scaffold00069 272738 1 G A scaffold2735 ScafM SNP 0020.scaffold00069 273940 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 273964 1 T C scaffold1021 ScafM INDEL 0020.scaffold00069 273982 1 A . scaffold1021 ScafM SNP 0020.scaffold00069 274023 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 274025 1 C G scaffold1021 ScafM SNP 0020.scaffold00069 274030 2 AC GT scaffold1021 ScafM SNP 0020.scaffold00069 274033 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 274058 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 274074 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 274108 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 274127 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 274142 1 G T scaffold1021 ScafM SNP 0020.scaffold00069 274148 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 274164 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 276331 2 AG TC scaffold1021 ScafM SNP 0020.scaffold00069 276342 1 C T scaffold1021 ScafM INDEL 0020.scaffold00069 276344 1 . A scaffold1021 ScafM SNP 0020.scaffold00069 276362 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 276406 1 T A scaffold1021 ScafM INDEL 0020.scaffold00069 276408 4 .... GCAT scaffold1021 ScafM INDEL 0020.scaffold00069 276422 2 TA .. scaffold1021 ScafM INDEL 0020.scaffold00069 276477 1 A . scaffold1021 ScafM SNP 0020.scaffold00069 276486 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 276491 1 T C scaffold1021 ScafM INDEL 0020.scaffold00069 276493 1 G . scaffold1021 ScafM INDEL 0020.scaffold00069 276508 19 ................... GATTAATATTGTGCATTAA scaffold1021 ScafM INDEL 0020.scaffold00069 276511 11 ........... ACTTAAAAGTC scaffold1021 ScafM INDEL 0020.scaffold00069 276513 1 . A scaffold1021 ScafM INDEL 0020.scaffold00069 276518 1 . T scaffold1021 ScafM SNP 0020.scaffold00069 276520 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 276536 1 A G scaffold1021 ScafM INDEL 0020.scaffold00069 276547 1 . T scaffold1021 ScafM SNP 0020.scaffold00069 276556 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 276562 1 A G scaffold1021 ScafM INDEL 0020.scaffold00069 276567 1 T . scaffold1021 ScafM INDEL 0020.scaffold00069 276569 1 T . scaffold1021 ScafM SNP 0020.scaffold00069 276604 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 276608 1 C G scaffold1021 ScafM SNP 0020.scaffold00069 276634 2 GT AA scaffold1021 ScafM SNP 0020.scaffold00069 276650 1 C A scaffold1021 ScafM SNP 0020.scaffold00069 276666 1 T A scaffold1021 ScafM INDEL 0020.scaffold00069 276673 2 .. GA scaffold1021 ScafM INDEL 0020.scaffold00069 276699 8 CAGTTTTT ........ scaffold1021 ScafM SNP 0020.scaffold00069 276736 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 276742 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 276756 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 276767 1 G T scaffold1021 ScafM SNP 0020.scaffold00069 276829 1 G T scaffold1021 Both SNP 0020.scaffold00069 276859 1 C T scaffold1021 Both SNP 0020.scaffold00069 276869 1 G A scaffold1021 Both SNP 0020.scaffold00069 276880 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 277065 1 A T scaffold1021 ScafM SNP 0020.scaffold00069 277122 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 277127 1 T A scaffold1021 ScafM INDEL 0020.scaffold00069 277130 1 T . scaffold1021 ScafM INDEL 0020.scaffold00069 277137 1 . A scaffold1021 ScafM SNP 0020.scaffold00069 277145 1 G A scaffold1021 ReadM INDEL 0020.scaffold00069 277196 1 T . - ReadM SNP 0020.scaffold00069 277227 1 A G - ReadM SNP 0020.scaffold00069 277293 1 T C - ReadM INDEL 0020.scaffold00069 277309 1 . T - ReadM SNP 0020.scaffold00069 277376 1 C A - ReadM SNP 0020.scaffold00069 277406 1 A C - ReadM SNP 0020.scaffold00069 277424 1 C A - ReadM SNP 0020.scaffold00069 277480 1 A G - ScafM SNP 0020.scaffold00069 277509 1 G T scaffold1021 Both SNP 0020.scaffold00069 277529 1 G A scaffold1021 Both SNP 0020.scaffold00069 277705 1 G A scaffold1021 Both SNP 0020.scaffold00069 277789 1 G A scaffold1021 Both SNP 0020.scaffold00069 277809 1 T G scaffold1021 Both SNP 0020.scaffold00069 277816 1 C T scaffold1021 Both SNP 0020.scaffold00069 277850 2 TC GA scaffold1021 Both SNP 0020.scaffold00069 277957 1 C A scaffold1021 ScafM SNP 0020.scaffold00069 278004 1 C G scaffold1021 ScafM SNP 0020.scaffold00069 278076 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 278079 1 T G scaffold1021 ScafM INDEL 0020.scaffold00069 278091 6 AGGAAC ...... scaffold1021 ScafM INDEL 0020.scaffold00069 278100 2 CC .. scaffold1021 ScafM INDEL 0020.scaffold00069 278121 2 .T CA scaffold1021 ScafM SNP 0020.scaffold00069 278133 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 278143 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 278243 1 A C scaffold1021 ScafM SNP 0020.scaffold00069 278266 1 A C scaffold1021 ScafM SNP 0020.scaffold00069 278270 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 278495 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 278497 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 278524 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 278531 2 TC CA scaffold1021 ScafM SNP 0020.scaffold00069 278534 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 278618 1 T C scaffold1021 ScafM INDEL 0020.scaffold00069 278669 1 T . scaffold1021 ScafM SNP 0020.scaffold00069 278687 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 278690 1 A C scaffold1021 ScafM SNP 0020.scaffold00069 278692 2 AG CT scaffold1021 ScafM SNP 0020.scaffold00069 278709 2 TA AT scaffold1021 Both SNP 0020.scaffold00069 278817 1 A G scaffold1021 Both SNP 0020.scaffold00069 278820 1 G C scaffold1021 ScafM SNP 0020.scaffold00069 278906 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 278918 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 278921 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 278924 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 279021 1 A T scaffold1021 ScafM SNP 0020.scaffold00069 279030 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 279040 1 A C scaffold1021 ScafM INDEL 0020.scaffold00069 279122 1 T . scaffold1021 ScafM SNP 0020.scaffold00069 279134 1 G T scaffold1021 ScafM SNP 0020.scaffold00069 279139 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 279143 2 AA CC scaffold1021 ScafM INDEL 0020.scaffold00069 279146 1 . C scaffold1021 ScafM INDEL 0020.scaffold00069 279158 1 G . scaffold1021 ScafM INDEL 0020.scaffold00069 279170 1 A . scaffold1021 ScafM SNP 0020.scaffold00069 279172 1 A T scaffold1021 ScafM SNP 0020.scaffold00069 279193 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 279204 1 A C scaffold1021 ScafM SNP 0020.scaffold00069 279614 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 279620 1 T G scaffold1021 ScafM SNP 0020.scaffold00069 279622 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 279628 1 G C scaffold1021 ScafM SNP 0020.scaffold00069 279631 1 G T scaffold1021 ScafM INDEL 0020.scaffold00069 279634 1 T . scaffold1021 ScafM SNP 0020.scaffold00069 279638 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 279642 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 279645 1 A T scaffold1021 ScafM INDEL 0020.scaffold00069 279661 1 . C scaffold1021 ScafM SNP 0020.scaffold00069 279666 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 279671 1 G A scaffold1021 ScafM INDEL 0020.scaffold00069 279672 1 . A scaffold1021 ScafM INDEL 0020.scaffold00069 279692 2 .. TT scaffold1021 ScafM INDEL 0020.scaffold00069 279710 6 TTTTTT ...... scaffold1021 ScafM INDEL 0020.scaffold00069 279718 2 AT .. scaffold1021 ScafM SNP 0020.scaffold00069 279721 1 T A scaffold1021 ScafM INDEL 0020.scaffold00069 279724 2 TG .. scaffold1021 ScafM INDEL 0020.scaffold00069 279744 1 . A scaffold1021 ScafM SNP 0020.scaffold00069 279747 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 279898 1 T C scaffold1021 ScafM SNP 0020.scaffold00069 279900 1 T A scaffold1021 ScafM SNP 0020.scaffold00069 279932 1 A T scaffold1021 ScafM SNP 0020.scaffold00069 279935 1 G T scaffold1021 ScafM SNP 0020.scaffold00069 279943 1 A C scaffold1021 ScafM SNP 0020.scaffold00069 279949 1 C T scaffold1021 ScafM INDEL 0020.scaffold00069 279976 1 . A scaffold1021 ScafM INDEL 0020.scaffold00069 279990 8 AATTCCAT ........ scaffold1021 ScafM SNP 0020.scaffold00069 280638 1 C T scaffold1021 ScafM INDEL 0020.scaffold00069 280837 2 .. AT scaffold1021 ScafM SNP 0020.scaffold00069 281231 1 G A scaffold1021 ScafM SNP 0020.scaffold00069 281241 1 A G scaffold1021 ScafM SNP 0020.scaffold00069 281275 1 G C scaffold1021 ScafM INDEL 0020.scaffold00069 281584 1 A . scaffold1021 ScafM SNP 0020.scaffold00069 281588 1 C A scaffold1021 ScafM SNP 0020.scaffold00069 281595 1 C T scaffold1021 ScafM SNP 0020.scaffold00069 281615 1 G C scaffold1021 ScafM INDEL 0020.scaffold00069 281814 2 AT .. scaffold1021 ScafM SNP 0020.scaffold00069 281832 1 G T scaffold1021 Both SNP 0020.scaffold00069 281884 1 A T scaffold1021 Both SNP 0020.scaffold00069 281903 1 G A scaffold1021 ScafM INDEL 0020.scaffold00069 282170 2 .. AT scaffold1021 ScafM SNP 0020.scaffold00069 282187 1 T C scaffold1021 Both SNP 0020.scaffold00069 282530 1 T A scaffold1021 ScafM INDEL 0020.scaffold00069 284870 2 GG .. scaffold1021 ScafM SNP 0020.scaffold00069 345534 2 CC TT scaffold7372 ScafM SNP 0020.scaffold00069 345542 1 C T scaffold7372 ScafM SNP 0020.scaffold00069 345551 1 G T scaffold7372 ScafM SNP 0020.scaffold00069 345562 1 C T scaffold7372 ScafM SNP 0020.scaffold00069 345592 1 A T scaffold7372 ScafM SNP 0020.scaffold00069 345622 1 A C scaffold7372 ScafM SNP 0020.scaffold00069 345697 1 A G scaffold7372 ScafM INDEL 0020.scaffold00069 345703 3 .TT AGA scaffold7372 ScafM SNP 0020.scaffold00069 345710 2 AG CA scaffold7372 ScafM SNP 0020.scaffold00069 345722 2 TC CT scaffold7372 ScafM SNP 0020.scaffold00069 345726 1 T C scaffold7372 ScafM SNP 0020.scaffold00069 345750 2 AA GT scaffold7372 ScafM SNP 0020.scaffold00069 345757 1 T C scaffold7372 ScafM SNP 0020.scaffold00069 345761 1 A G scaffold7372 ScafM SNP 0020.scaffold00069 345763 1 T A scaffold7372 ScafM SNP 0020.scaffold00069 349492 1 T C scaffold376 Both SNP 0020.scaffold00069 354203 1 T G scaffold376 Both SNP 0020.scaffold00069 354227 1 A G scaffold376 Both SNP 0020.scaffold00069 354497 1 G A scaffold376 Both SNP 0020.scaffold00069 354605 1 G T scaffold376 Both SNP 0020.scaffold00069 354860 1 A G scaffold376 ScafM SNP 0020.scaffold00069 354876 2 CA TG scaffold376 Both SNP 0020.scaffold00069 354910 1 G A scaffold376 Both SNP 0020.scaffold00069 355007 1 G A scaffold376 Both SNP 0020.scaffold00069 355148 1 G A scaffold376 Both SNP 0020.scaffold00069 355206 1 A G scaffold376 Both SNP 0020.scaffold00069 355233 1 T A scaffold376 ScafM SNP 0020.scaffold00069 355266 1 G T scaffold376 ScafM SNP 0020.scaffold00069 355270 1 T G scaffold376 ScafM SNP 0020.scaffold00069 355276 1 C G scaffold376 ScafM SNP 0020.scaffold00069 355279 1 A C scaffold376 Both SNP 0020.scaffold00069 355289 1 A G scaffold376 Both SNP 0020.scaffold00069 355665 1 A C scaffold376 ReadM SNP 0020.scaffold00069 355798 1 T C - ReadM SNP 0020.scaffold00069 355819 1 C T - ReadM INDEL 0020.scaffold00069 355915 2 TT .. - Both SNP 0020.scaffold00069 356007 1 C T scaffold376 Both SNP 0020.scaffold00069 356294 1 A T scaffold376 ScafM SNP 0020.scaffold00069 361706 1 T C scaffold376 ScafM SNP 0020.scaffold00069 365774 1 A G scaffold376 ReadM SNP 0020.scaffold00069 371082 1 G A - Both SNP 0020.scaffold00069 373111 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 374771 21 ..................... TTAATAATAATAATAATAATA scaffold376 ScafM INDEL 0020.scaffold00069 375108 1 T . scaffold376 Both INDEL 0020.scaffold00069 375282 2 TG .. scaffold376 Both INDEL 0020.scaffold00069 375376 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 375484 4 .... TTGG scaffold376 ScafM INDEL 0020.scaffold00069 375487 7 ....... TTTGTTT scaffold376 ScafM INDEL 0020.scaffold00069 375488 3 ... TTT scaffold376 ScafM SNP 0020.scaffold00069 375631 2 GT AA scaffold376 Both INDEL 0020.scaffold00069 375654 1 . T scaffold376 ScafM SNP 0020.scaffold00069 375798 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 375820 5 GTTTA ..... scaffold376 Both SNP 0020.scaffold00069 375904 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 375947 6 TTTTGT ...... scaffold376 ScafM SNP 0020.scaffold00069 375954 1 T C scaffold376 ScafM SNP 0020.scaffold00069 375974 1 T A scaffold376 ScafM SNP 0020.scaffold00069 375976 1 G C scaffold376 ScafM SNP 0020.scaffold00069 376011 1 A T scaffold376 ScafM SNP 0020.scaffold00069 376013 1 G T scaffold376 Both SNP 0020.scaffold00069 376093 1 T C scaffold376 ScafM SNP 0020.scaffold00069 376147 1 G T scaffold376 ScafM SNP 0020.scaffold00069 376179 1 A C scaffold376 ScafM SNP 0020.scaffold00069 376188 1 T C scaffold376 ScafM SNP 0020.scaffold00069 376194 1 C A scaffold376 ScafM SNP 0020.scaffold00069 376200 1 A G scaffold376 Both SNP 0020.scaffold00069 376303 2 TG CA scaffold376 Both SNP 0020.scaffold00069 376381 1 T C scaffold376 ReadM SNP 0020.scaffold00069 376485 1 C T - ReadM SNP 0020.scaffold00069 376490 1 C T - ReadM SNP 0020.scaffold00069 376531 1 T C - ReadM SNP 0020.scaffold00069 376564 1 T C - Both SNP 0020.scaffold00069 376606 1 T C scaffold376 Both SNP 0020.scaffold00069 376621 1 C T scaffold376 Both SNP 0020.scaffold00069 376712 1 G A scaffold376 Both INDEL 0020.scaffold00069 376842 1 . T scaffold376 Both SNP 0020.scaffold00069 376867 1 A G scaffold376 Both SNP 0020.scaffold00069 376870 1 A G scaffold376 Both INDEL 0020.scaffold00069 376925 2 AC .. scaffold376 ScafM SNP 0020.scaffold00069 376966 1 A G scaffold376 Both SNP 0020.scaffold00069 376997 1 A G scaffold376 Both SNP 0020.scaffold00069 377000 1 G C scaffold376 Both SNP 0020.scaffold00069 377025 1 T C scaffold376 Both SNP 0020.scaffold00069 377140 1 G C scaffold376 Both INDEL 0020.scaffold00069 377152 1 . T scaffold376 ScafM SNP 0020.scaffold00069 377190 1 C T scaffold376 ScafM SNP 0020.scaffold00069 377198 1 G A scaffold376 ScafM SNP 0020.scaffold00069 377200 2 TC CT scaffold376 ScafM SNP 0020.scaffold00069 377207 1 C T scaffold376 ScafM SNP 0020.scaffold00069 377226 1 C A scaffold376 ScafM SNP 0020.scaffold00069 377252 1 A G scaffold376 ScafM SNP 0020.scaffold00069 377295 1 G A scaffold376 ScafM SNP 0020.scaffold00069 377298 1 T C scaffold376 ScafM SNP 0020.scaffold00069 377311 1 A G scaffold376 ScafM SNP 0020.scaffold00069 377330 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 377348 27 TAATCTTTACATAAACATCATGTCCCG ........................... scaffold376 ScafM SNP 0020.scaffold00069 377394 1 T C scaffold376 ScafM SNP 0020.scaffold00069 377417 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 377434 1 . T scaffold376 ScafM SNP 0020.scaffold00069 377444 1 C A scaffold376 ScafM SNP 0020.scaffold00069 377471 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 377475 2 .. GA scaffold376 ScafM SNP 0020.scaffold00069 377490 1 A T scaffold376 ScafM SNP 0020.scaffold00069 377517 1 A T scaffold376 ScafM SNP 0020.scaffold00069 377525 1 A T scaffold376 ScafM SNP 0020.scaffold00069 377544 1 A G scaffold376 ScafM SNP 0020.scaffold00069 377562 1 A G scaffold376 ScafM SNP 0020.scaffold00069 377576 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 377924 9 ......... AATCTCCCA scaffold376 ScafM INDEL 0020.scaffold00069 377949 1 . A scaffold376 Both SNP 0020.scaffold00069 378057 1 C A scaffold376 Both SNP 0020.scaffold00069 378148 1 G A scaffold376 Both SNP 0020.scaffold00069 378228 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 378263 8 AACTACTA ........ scaffold376 Both SNP 0020.scaffold00069 378355 1 T C scaffold376 Both SNP 0020.scaffold00069 378391 1 C T scaffold376 Both SNP 0020.scaffold00069 378399 1 A G scaffold376 Both SNP 0020.scaffold00069 378421 1 A T scaffold376 Both INDEL 0020.scaffold00069 378445 1 . T scaffold376 Both SNP 0020.scaffold00069 378553 1 G C scaffold376 ScafM SNP 0020.scaffold00069 378588 1 T C scaffold376 ScafM SNP 0020.scaffold00069 378593 1 T C scaffold376 ScafM SNP 0020.scaffold00069 378597 1 A C scaffold376 Both SNP 0020.scaffold00069 378626 1 T C scaffold376 Both SNP 0020.scaffold00069 378692 1 A T scaffold376 Both SNP 0020.scaffold00069 378717 1 G C scaffold376 Both SNP 0020.scaffold00069 378883 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 378899 10 .......... TCCCCCCCCC scaffold376 ScafM SNP 0020.scaffold00069 378901 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 378919 1 . C scaffold376 Both SNP 0020.scaffold00069 378932 1 T A scaffold376 Both SNP 0020.scaffold00069 379164 1 C T scaffold376 Both SNP 0020.scaffold00069 379302 1 T C scaffold376 ScafM SNP 0020.scaffold00069 379326 1 C T scaffold376 Both SNP 0020.scaffold00069 379383 1 T A scaffold376 ScafM SNP 0020.scaffold00069 379584 2 GG TT scaffold376 Both SNP 0020.scaffold00069 379675 1 T G scaffold376 Both SNP 0020.scaffold00069 379759 1 G A scaffold376 Both SNP 0020.scaffold00069 379813 1 T A scaffold376 Both SNP 0020.scaffold00069 379869 1 T C scaffold376 Both SNP 0020.scaffold00069 379974 1 T A scaffold376 Both SNP 0020.scaffold00069 380161 1 T C scaffold376 ScafM SNP 0020.scaffold00069 380186 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 380239 6 ...... TCTTAA scaffold376 Both SNP 0020.scaffold00069 380368 1 T G scaffold376 ScafM SNP 0020.scaffold00069 380535 1 A G scaffold376 Both SNP 0020.scaffold00069 380655 1 T A scaffold376 Both SNP 0020.scaffold00069 380673 1 C T scaffold376 Both SNP 0020.scaffold00069 380755 1 A G scaffold376 Both SNP 0020.scaffold00069 380832 1 T G scaffold376 Both SNP 0020.scaffold00069 380896 1 A T scaffold376 Both SNP 0020.scaffold00069 380954 1 C G scaffold376 Both SNP 0020.scaffold00069 380966 1 T A scaffold376 Both SNP 0020.scaffold00069 381000 1 T C scaffold376 Both SNP 0020.scaffold00069 381503 1 T G scaffold376 Both SNP 0020.scaffold00069 381526 1 A T scaffold376 Both SNP 0020.scaffold00069 381540 1 G T scaffold376 ScafM SNP 0020.scaffold00069 381578 2 AT GA scaffold376 ScafM SNP 0020.scaffold00069 381597 1 G T scaffold376 Both SNP 0020.scaffold00069 381631 1 A G scaffold376 Both SNP 0020.scaffold00069 381655 1 A T scaffold376 Both SNP 0020.scaffold00069 381761 1 A T scaffold376 Both SNP 0020.scaffold00069 381784 1 T A scaffold376 Both SNP 0020.scaffold00069 381833 1 T C scaffold376 Both SNP 0020.scaffold00069 381847 1 T C scaffold376 ScafM SNP 0020.scaffold00069 381926 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 381931 3 GTA .AG scaffold376 Both SNP 0020.scaffold00069 381954 1 A G scaffold376 Both INDEL 0020.scaffold00069 381979 1 T . scaffold376 Both SNP 0020.scaffold00069 382004 1 T C scaffold376 Both SNP 0020.scaffold00069 382063 1 C A scaffold376 Both SNP 0020.scaffold00069 382132 1 A C scaffold376 Both SNP 0020.scaffold00069 382206 1 G C scaffold376 ScafM SNP 0020.scaffold00069 382224 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 382232 4 .... ACAT scaffold376 Both SNP 0020.scaffold00069 382360 1 T C scaffold376 Both SNP 0020.scaffold00069 382561 1 T C scaffold376 ScafM SNP 0020.scaffold00069 382595 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 382605 3 ... ATT scaffold376 ScafM SNP 0020.scaffold00069 382617 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 382630 1 A . scaffold376 ScafM SNP 0020.scaffold00069 382647 1 A T scaffold376 ScafM SNP 0020.scaffold00069 382670 1 A G scaffold376 ScafM SNP 0020.scaffold00069 382698 1 C A scaffold376 Both SNP 0020.scaffold00069 382724 1 G A scaffold376 ReadM SNP 0020.scaffold00069 382877 1 A G - ReadM SNP 0020.scaffold00069 383398 1 G T - ReadM SNP 0020.scaffold00069 384047 1 G A - ReadM SNP 0020.scaffold00069 384090 1 G C - ReadM SNP 0020.scaffold00069 384367 1 G A - ReadM SNP 0020.scaffold00069 384376 1 C A - ReadM SNP 0020.scaffold00069 384523 1 A G - ReadM SNP 0020.scaffold00069 384858 1 G A - ReadM SNP 0020.scaffold00069 384864 1 C T - ScafM SNP 0020.scaffold00069 384996 1 G A scaffold376 Both SNP 0020.scaffold00069 385009 1 A T scaffold376 ReadM SNP 0020.scaffold00069 385120 1 C T - ReadM INDEL 0020.scaffold00069 385126 1 T . - ReadM SNP 0020.scaffold00069 385146 1 G A - ScafM SNP 0020.scaffold00069 385227 1 T C scaffold376 ScafM SNP 0020.scaffold00069 385229 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385233 1 G T scaffold376 ScafM SNP 0020.scaffold00069 385243 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 385245 1 A . scaffold376 ScafM SNP 0020.scaffold00069 385249 1 A G scaffold376 ScafM SNP 0020.scaffold00069 385267 2 GT AA scaffold376 ScafM SNP 0020.scaffold00069 385282 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385288 1 C T scaffold376 ScafM SNP 0020.scaffold00069 385290 1 A G scaffold376 ScafM SNP 0020.scaffold00069 385292 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385307 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 385334 1 . A scaffold376 ScafM INDEL 0020.scaffold00069 385336 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 385340 2 CC .. scaffold376 ScafM INDEL 0020.scaffold00069 385343 1 A . scaffold376 ScafM SNP 0020.scaffold00069 385346 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 385347 1 . C scaffold376 ScafM SNP 0020.scaffold00069 385363 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385367 1 C T scaffold376 ScafM SNP 0020.scaffold00069 385369 1 A G scaffold376 ScafM SNP 0020.scaffold00069 385372 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385382 1 A G scaffold376 ScafM SNP 0020.scaffold00069 385412 1 G A scaffold376 ScafM SNP 0020.scaffold00069 385418 1 C T scaffold376 ScafM SNP 0020.scaffold00069 385420 1 T G scaffold376 ScafM SNP 0020.scaffold00069 385433 1 G T scaffold376 ScafM SNP 0020.scaffold00069 385446 1 C A scaffold376 ScafM SNP 0020.scaffold00069 385687 1 C G scaffold376 ScafM SNP 0020.scaffold00069 385718 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 385727 4 CCTA .... scaffold376 ScafM SNP 0020.scaffold00069 385734 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 385786 3 TAA ... scaffold376 ScafM INDEL 0020.scaffold00069 385834 1 C . scaffold376 ScafM SNP 0020.scaffold00069 386204 1 A T scaffold376 ScafM SNP 0020.scaffold00069 386239 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 386249 1 T . scaffold376 ScafM INDEL 0020.scaffold00069 386252 1 G . scaffold376 ScafM INDEL 0020.scaffold00069 386269 7 TGACCTT ....... scaffold376 ScafM SNP 0020.scaffold00069 386306 1 G A scaffold376 ScafM SNP 0020.scaffold00069 386310 1 T A scaffold376 ScafM SNP 0020.scaffold00069 386326 1 A G scaffold376 ScafM SNP 0020.scaffold00069 386338 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 386349 9 AGAAAAAAG ......... scaffold376 ScafM INDEL 0020.scaffold00069 386364 1 G . scaffold376 ScafM SNP 0020.scaffold00069 386394 1 A G scaffold376 ScafM SNP 0020.scaffold00069 386430 1 T A scaffold376 ScafM SNP 0020.scaffold00069 386456 1 A T scaffold376 ScafM SNP 0020.scaffold00069 386468 1 G A scaffold376 ScafM SNP 0020.scaffold00069 386932 1 A G scaffold376 ScafM SNP 0020.scaffold00069 386940 1 G A scaffold376 ScafM SNP 0020.scaffold00069 386944 1 T C scaffold376 ScafM SNP 0020.scaffold00069 386964 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 386999 8 TGGCCTGA ........ scaffold376 ScafM SNP 0020.scaffold00069 387019 1 A G scaffold376 ScafM SNP 0020.scaffold00069 387028 1 A T scaffold376 ScafM SNP 0020.scaffold00069 387033 1 C T scaffold376 ScafM SNP 0020.scaffold00069 387037 1 T A scaffold376 ScafM SNP 0020.scaffold00069 387051 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 387081 1 A . scaffold376 ScafM SNP 0020.scaffold00069 387086 1 G A scaffold376 ScafM SNP 0020.scaffold00069 387095 1 T C scaffold376 ScafM SNP 0020.scaffold00069 387125 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 387155 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 387161 8 TACTCAAA ........ scaffold376 ScafM INDEL 0020.scaffold00069 387215 1 . C scaffold376 ScafM SNP 0020.scaffold00069 387344 1 T A scaffold376 ScafM SNP 0020.scaffold00069 388503 1 A G scaffold376 ScafM SNP 0020.scaffold00069 388507 1 T A scaffold376 ScafM SNP 0020.scaffold00069 388511 1 G T scaffold376 ScafM SNP 0020.scaffold00069 388519 1 T C scaffold376 ScafM SNP 0020.scaffold00069 388527 1 T C scaffold376 ScafM SNP 0020.scaffold00069 388529 1 C T scaffold376 ScafM SNP 0020.scaffold00069 388542 1 A T scaffold376 ScafM SNP 0020.scaffold00069 388549 1 A G scaffold376 ScafM SNP 0020.scaffold00069 388562 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 388587 5 ..... TATAA scaffold376 ScafM SNP 0020.scaffold00069 388594 1 T C scaffold376 ScafM SNP 0020.scaffold00069 388606 1 G A scaffold376 ScafM SNP 0020.scaffold00069 388616 2 GC AA scaffold376 ScafM SNP 0020.scaffold00069 388639 1 A T scaffold376 ScafM SNP 0020.scaffold00069 388654 1 G A scaffold376 ScafM SNP 0020.scaffold00069 388664 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 388691 4 GCTA .... scaffold376 ScafM SNP 0020.scaffold00069 388726 1 T C scaffold376 ScafM SNP 0020.scaffold00069 388746 1 T C scaffold376 ScafM SNP 0020.scaffold00069 388762 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 388769 5 ..... CGTAC scaffold376 ScafM INDEL 0020.scaffold00069 388770 3 ... TTC scaffold376 ScafM SNP 0020.scaffold00069 388791 1 G C scaffold376 ScafM SNP 0020.scaffold00069 388832 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 389320 1 . C scaffold376 ScafM SNP 0020.scaffold00069 389509 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 389537 4 ATAT .... scaffold376 ScafM SNP 0020.scaffold00069 389559 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 389568 4 CCGG .... scaffold376 ScafM SNP 0020.scaffold00069 389575 1 G A scaffold376 ScafM SNP 0020.scaffold00069 390169 1 T C scaffold3264 ScafM SNP 0020.scaffold00069 390196 1 A G scaffold3264 ScafM SNP 0020.scaffold00069 390202 1 T C scaffold3264 ScafM SNP 0020.scaffold00069 390222 1 G A scaffold3264 ScafM SNP 0020.scaffold00069 390243 1 A G scaffold3264 ScafM INDEL 0020.scaffold00069 390266 1 . T scaffold3264 ScafM SNP 0020.scaffold00069 390293 1 C T scaffold3264 ScafM SNP 0020.scaffold00069 390298 1 T G scaffold3264 ScafM SNP 0020.scaffold00069 390349 1 G A scaffold3264 ScafM SNP 0020.scaffold00069 390414 1 G A scaffold3264 ScafM SNP 0020.scaffold00069 390422 1 G A scaffold3264 ScafM SNP 0020.scaffold00069 390424 1 A G scaffold3264 ScafM SNP 0020.scaffold00069 390469 1 T G scaffold3264 ScafM SNP 0020.scaffold00069 390487 1 G A scaffold3264 ScafM INDEL 0020.scaffold00069 390492 3 TTC ... scaffold3264 ScafM SNP 0020.scaffold00069 390526 1 C T scaffold3264 ScafM INDEL 0020.scaffold00069 392594 3 TCT ... scaffold6078 ScafM SNP 0020.scaffold00069 392639 1 C G scaffold6078 ScafM SNP 0020.scaffold00069 392645 1 C G scaffold6078 ScafM SNP 0020.scaffold00069 392657 1 T C scaffold6078 ScafM SNP 0020.scaffold00069 392719 1 T C scaffold6078 ScafM SNP 0020.scaffold00069 392721 1 G C scaffold6078 ScafM INDEL 0020.scaffold00069 392751 2 AT .. scaffold6078 ScafM SNP 0020.scaffold00069 392758 1 C T scaffold6078 ScafM SNP 0020.scaffold00069 392765 1 C A scaffold6078 ScafM SNP 0020.scaffold00069 392867 1 G A scaffold6078 ScafM SNP 0020.scaffold00069 392924 1 T C scaffold6078 ScafM INDEL 0020.scaffold00069 392934 1 . G scaffold6078 ScafM SNP 0020.scaffold00069 392988 1 A G scaffold6078 ScafM SNP 0020.scaffold00069 392992 1 T C scaffold6078 ScafM SNP 0020.scaffold00069 393006 1 A T scaffold6078 ScafM SNP 0020.scaffold00069 394429 1 T C scaffold376 ScafM SNP 0020.scaffold00069 394476 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 394580 1 T . scaffold376 ScafM SNP 0020.scaffold00069 394724 1 G C scaffold376 ScafM SNP 0020.scaffold00069 394728 1 T A scaffold376 ScafM SNP 0020.scaffold00069 394731 1 C T scaffold376 ScafM SNP 0020.scaffold00069 394744 1 A G scaffold376 ScafM SNP 0020.scaffold00069 394747 1 G A scaffold376 ScafM SNP 0020.scaffold00069 394782 1 C T scaffold376 ScafM SNP 0020.scaffold00069 394805 1 G C scaffold376 ScafM INDEL 0020.scaffold00069 394878 3 ACG ... scaffold376 ScafM SNP 0020.scaffold00069 394886 1 A G scaffold376 ScafM SNP 0020.scaffold00069 394892 1 T A scaffold376 ScafM SNP 0020.scaffold00069 394908 1 T C scaffold376 ScafM SNP 0020.scaffold00069 394939 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 394965 3 ... TAA scaffold376 ScafM SNP 0020.scaffold00069 394967 1 G T scaffold376 ScafM SNP 0020.scaffold00069 394980 1 G A scaffold376 Both SNP 0020.scaffold00069 395035 1 A T scaffold376 Both SNP 0020.scaffold00069 395246 1 G A scaffold376 Both SNP 0020.scaffold00069 395380 1 A G scaffold376 Both SNP 0020.scaffold00069 395386 1 G A scaffold376 Both SNP 0020.scaffold00069 395416 1 A G scaffold376 ScafM SNP 0020.scaffold00069 395425 1 A G scaffold376 ScafM SNP 0020.scaffold00069 395438 1 G C scaffold376 ScafM SNP 0020.scaffold00069 395513 1 G A scaffold376 ScafM SNP 0020.scaffold00069 395518 1 T C scaffold376 ScafM SNP 0020.scaffold00069 395524 1 A G scaffold376 ScafM SNP 0020.scaffold00069 395530 1 C G scaffold376 ScafM SNP 0020.scaffold00069 395539 1 C T scaffold376 ScafM SNP 0020.scaffold00069 395572 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 395684 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 395692 7 TTACAAG ....... scaffold376 ScafM SNP 0020.scaffold00069 395708 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 395730 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 395731 4 .... CGGT scaffold376 ScafM INDEL 0020.scaffold00069 395733 2 .. TG scaffold376 ScafM SNP 0020.scaffold00069 395736 1 A T scaffold376 ScafM SNP 0020.scaffold00069 395738 1 G T scaffold376 ScafM SNP 0020.scaffold00069 395773 1 C T scaffold376 ScafM SNP 0020.scaffold00069 395780 1 G A scaffold376 ScafM SNP 0020.scaffold00069 396532 1 T C scaffold376 ScafM SNP 0020.scaffold00069 396543 1 G A scaffold376 ScafM SNP 0020.scaffold00069 396557 1 G T scaffold376 ScafM SNP 0020.scaffold00069 396583 1 C A scaffold376 ScafM SNP 0020.scaffold00069 396589 1 T A scaffold376 ScafM SNP 0020.scaffold00069 396592 2 TT GA scaffold376 ScafM INDEL 0020.scaffold00069 396596 3 GAT ... scaffold376 ScafM SNP 0020.scaffold00069 396603 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 396605 1 . A scaffold376 ScafM SNP 0020.scaffold00069 396621 1 A G scaffold376 ScafM SNP 0020.scaffold00069 396632 1 T C scaffold376 ScafM SNP 0020.scaffold00069 396645 1 G A scaffold376 ScafM SNP 0020.scaffold00069 396681 1 A C scaffold376 ScafM SNP 0020.scaffold00069 396692 1 A G scaffold376 ScafM SNP 0020.scaffold00069 396764 1 G C scaffold376 ScafM SNP 0020.scaffold00069 396794 1 A G scaffold376 ScafM SNP 0020.scaffold00069 396796 1 C T scaffold376 ScafM SNP 0020.scaffold00069 396805 1 C T scaffold376 ScafM SNP 0020.scaffold00069 396817 1 A C scaffold376 ScafM SNP 0020.scaffold00069 396821 1 A T scaffold376 ScafM SNP 0020.scaffold00069 396824 1 T C scaffold376 ScafM SNP 0020.scaffold00069 397064 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 397072 1 . C scaffold376 ScafM SNP 0020.scaffold00069 397084 1 G T scaffold376 ScafM SNP 0020.scaffold00069 397093 1 T C scaffold376 ScafM SNP 0020.scaffold00069 397097 1 G C scaffold376 ScafM SNP 0020.scaffold00069 397100 1 A T scaffold376 ScafM SNP 0020.scaffold00069 397110 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 397127 2 .. TC scaffold376 ScafM SNP 0020.scaffold00069 397130 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 397143 1 A . scaffold376 ScafM SNP 0020.scaffold00069 397170 1 C T scaffold376 ScafM SNP 0020.scaffold00069 397199 1 C T scaffold376 ScafM SNP 0020.scaffold00069 397213 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 397253 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 397293 1 G . scaffold376 ScafM SNP 0020.scaffold00069 397303 1 C G scaffold376 ScafM SNP 0020.scaffold00069 397952 1 C T scaffold376 ScafM SNP 0020.scaffold00069 397971 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 397979 3 CTG ... scaffold376 ScafM SNP 0020.scaffold00069 397988 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 398030 2 .. GA scaffold376 ScafM SNP 0020.scaffold00069 398065 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 398074 2 AT .. scaffold376 ScafM INDEL 0020.scaffold00069 398077 2 AA .. scaffold376 ScafM INDEL 0020.scaffold00069 398080 5 ATATA ..... scaffold376 ScafM SNP 0020.scaffold00069 398127 1 G T scaffold376 ScafM SNP 0020.scaffold00069 398134 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 398145 4 .... TTAA scaffold376 ScafM INDEL 0020.scaffold00069 398163 1 . G scaffold376 ScafM SNP 0020.scaffold00069 398167 1 A C scaffold376 ScafM SNP 0020.scaffold00069 398170 1 G C scaffold376 ScafM SNP 0020.scaffold00069 398182 1 T C scaffold376 ScafM SNP 0020.scaffold00069 398203 1 C T scaffold376 ScafM SNP 0020.scaffold00069 398207 2 CA AT scaffold376 ScafM SNP 0020.scaffold00069 398254 1 T G scaffold376 ReadM INDEL 0020.scaffold00069 398735 1 A . - ScafM INDEL 0020.scaffold00069 399375 1 A . scaffold376 ScafM SNP 0020.scaffold00069 399381 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 399384 1 G . scaffold376 ScafM SNP 0020.scaffold00069 399438 1 A G scaffold376 ScafM SNP 0020.scaffold00069 399456 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 399491 2 CG .. scaffold376 ScafM SNP 0020.scaffold00069 399510 2 AC GA scaffold376 ScafM SNP 0020.scaffold00069 399522 2 TA GT scaffold376 ReadM SNP 0020.scaffold00069 400126 1 T A - ReadM SNP 0020.scaffold00069 400172 1 G A - Both INDEL 0020.scaffold00069 400514 1 T . scaffold376 Both SNP 0020.scaffold00069 400524 1 A G scaffold376 Both SNP 0020.scaffold00069 400550 1 T A scaffold376 Both SNP 0020.scaffold00069 400669 1 T A scaffold376 Both SNP 0020.scaffold00069 400709 1 T A scaffold376 ScafM SNP 0020.scaffold00069 400922 1 T G scaffold376 ScafM SNP 0020.scaffold00069 400939 1 A T scaffold376 ScafM SNP 0020.scaffold00069 400949 2 AG TC scaffold376 ScafM SNP 0020.scaffold00069 401009 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 401037 5 ..... TTGAA scaffold376 ScafM INDEL 0020.scaffold00069 401039 11 ........... TGACACGCGAA scaffold376 ScafM SNP 0020.scaffold00069 405104 1 C T scaffold376 ScafM SNP 0020.scaffold00069 405118 1 T C scaffold376 Both SNP 0020.scaffold00069 405232 1 C G scaffold376 Both SNP 0020.scaffold00069 405239 1 C A scaffold376 Both INDEL 0020.scaffold00069 405523 3 TGA ... scaffold376 Both SNP 0020.scaffold00069 405649 1 C T scaffold376 Both SNP 0020.scaffold00069 405707 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 405723 7 ....... GAGTTAA scaffold376 ScafM SNP 0020.scaffold00069 405738 1 A C scaffold376 ScafM SNP 0020.scaffold00069 405746 1 T C scaffold376 ScafM SNP 0020.scaffold00069 405770 1 T C scaffold376 ScafM SNP 0020.scaffold00069 405775 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 405787 1 . C scaffold376 ScafM SNP 0020.scaffold00069 405793 1 A G scaffold376 ScafM SNP 0020.scaffold00069 405803 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 405815 11 ........... ACCACAATTAA scaffold376 ScafM SNP 0020.scaffold00069 405838 1 G A scaffold376 ScafM SNP 0020.scaffold00069 405853 1 T C scaffold376 ScafM SNP 0020.scaffold00069 405876 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 405879 2 .C TT scaffold376 ScafM SNP 0020.scaffold00069 405888 1 T C scaffold376 ScafM SNP 0020.scaffold00069 405891 1 G A scaffold376 ScafM SNP 0020.scaffold00069 405898 1 C T scaffold376 ScafM SNP 0020.scaffold00069 405908 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 405918 21 ACCACCAGACACTTAGCTACA ..................... scaffold376 ScafM SNP 0020.scaffold00069 405966 1 C G scaffold376 ScafM SNP 0020.scaffold00069 405987 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406010 1 T G scaffold376 ScafM INDEL 0020.scaffold00069 406016 1 . C scaffold376 ScafM SNP 0020.scaffold00069 406025 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406041 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406081 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406083 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406097 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406102 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406121 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406123 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406127 1 C A scaffold376 ScafM SNP 0020.scaffold00069 406135 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406138 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406158 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406164 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 406167 3 TGG ... scaffold376 ScafM INDEL 0020.scaffold00069 406173 2 TA .. scaffold376 ScafM SNP 0020.scaffold00069 406192 1 G T scaffold376 ScafM SNP 0020.scaffold00069 406199 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406238 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406249 1 C A scaffold376 ScafM SNP 0020.scaffold00069 406258 1 T A scaffold376 ScafM SNP 0020.scaffold00069 406310 2 TA CC scaffold376 ScafM SNP 0020.scaffold00069 406326 2 CT AC scaffold376 ScafM SNP 0020.scaffold00069 406332 2 TT CG scaffold376 ScafM SNP 0020.scaffold00069 406356 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406365 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406370 2 TG AC scaffold376 ScafM SNP 0020.scaffold00069 406374 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406385 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406389 1 T A scaffold376 ScafM SNP 0020.scaffold00069 406406 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406412 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406415 1 C G scaffold376 ScafM SNP 0020.scaffold00069 406417 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406429 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406462 1 A T scaffold376 ScafM SNP 0020.scaffold00069 406482 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406498 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 406505 1 . C scaffold376 ScafM SNP 0020.scaffold00069 406513 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 406536 4 AGAT .... scaffold376 ScafM INDEL 0020.scaffold00069 406548 2 TT .. scaffold376 ScafM SNP 0020.scaffold00069 406571 1 A T scaffold376 ScafM SNP 0020.scaffold00069 406587 2 AA GG scaffold376 ScafM SNP 0020.scaffold00069 406603 1 A C scaffold376 ScafM SNP 0020.scaffold00069 406610 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 406615 2 .. AC scaffold376 ScafM INDEL 0020.scaffold00069 406622 1 A . scaffold376 ScafM SNP 0020.scaffold00069 406626 3 ATT GAA scaffold376 ScafM SNP 0020.scaffold00069 406633 1 T G scaffold376 ScafM SNP 0020.scaffold00069 406635 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406666 1 C A scaffold376 ScafM SNP 0020.scaffold00069 406684 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406700 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406728 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406745 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 406746 1 . A scaffold376 ScafM SNP 0020.scaffold00069 406750 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 406764 1 . G scaffold376 ScafM SNP 0020.scaffold00069 406773 1 C A scaffold376 ScafM SNP 0020.scaffold00069 406775 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406779 1 G A scaffold376 ScafM SNP 0020.scaffold00069 406781 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406783 1 A G scaffold376 ScafM SNP 0020.scaffold00069 406793 1 C T scaffold376 ScafM SNP 0020.scaffold00069 406798 1 G C scaffold376 ScafM SNP 0020.scaffold00069 406812 1 T C scaffold376 ScafM SNP 0020.scaffold00069 406819 1 C T scaffold376 ScafM SNP 0020.scaffold00069 409564 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 409567 2 GC .A scaffold376 ScafM SNP 0020.scaffold00069 409579 1 A G scaffold376 ScafM SNP 0020.scaffold00069 409601 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 409609 1 A . scaffold376 ScafM SNP 0020.scaffold00069 409630 1 C A scaffold376 ScafM SNP 0020.scaffold00069 409645 1 C T scaffold376 ScafM SNP 0020.scaffold00069 409647 1 G A scaffold376 ScafM SNP 0020.scaffold00069 409663 1 A G scaffold376 ScafM SNP 0020.scaffold00069 409675 1 C T scaffold376 ScafM SNP 0020.scaffold00069 409702 1 T C scaffold376 ScafM SNP 0020.scaffold00069 409723 1 A G scaffold376 ScafM SNP 0020.scaffold00069 409740 1 G A scaffold376 ScafM SNP 0020.scaffold00069 409746 2 GT AC scaffold376 ScafM SNP 0020.scaffold00069 409753 1 A T scaffold376 ScafM SNP 0020.scaffold00069 409766 1 G T scaffold376 ScafM SNP 0020.scaffold00069 409772 1 T G scaffold376 ScafM SNP 0020.scaffold00069 409783 2 AA CG scaffold376 ScafM SNP 0020.scaffold00069 409789 1 A G scaffold376 ScafM SNP 0020.scaffold00069 409802 1 C T scaffold376 ScafM SNP 0020.scaffold00069 409818 1 T A scaffold376 ScafM SNP 0020.scaffold00069 409821 1 A G scaffold376 ScafM SNP 0020.scaffold00069 411070 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 411090 1 . T scaffold376 ScafM SNP 0020.scaffold00069 411113 1 A T scaffold376 ScafM SNP 0020.scaffold00069 411139 1 C T scaffold376 ScafM SNP 0020.scaffold00069 411141 1 A C scaffold376 ScafM SNP 0020.scaffold00069 411467 1 C G scaffold376 ScafM SNP 0020.scaffold00069 411474 1 C T scaffold376 ScafM SNP 0020.scaffold00069 411476 1 T A scaffold376 ScafM SNP 0020.scaffold00069 411480 1 T A scaffold376 ScafM SNP 0020.scaffold00069 411482 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 411484 1 . G scaffold376 ScafM SNP 0020.scaffold00069 411501 1 T C scaffold376 ScafM SNP 0020.scaffold00069 411524 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 411528 6 ...... GATCAT scaffold376 ScafM INDEL 0020.scaffold00069 411532 1 . C scaffold376 ScafM SNP 0020.scaffold00069 411538 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 411549 3 TTA ... scaffold376 ScafM SNP 0020.scaffold00069 411558 1 T A scaffold376 ScafM SNP 0020.scaffold00069 411561 1 G C scaffold376 ScafM INDEL 0020.scaffold00069 411567 1 T . scaffold376 ScafM SNP 0020.scaffold00069 411591 2 GG TA scaffold376 ScafM INDEL 0020.scaffold00069 411594 2 AA .G scaffold376 ScafM INDEL 0020.scaffold00069 411618 1 . A scaffold376 ScafM SNP 0020.scaffold00069 411817 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 411821 1 A . scaffold376 ScafM INDEL 0020.scaffold00069 411824 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 411828 1 T . scaffold376 ScafM SNP 0020.scaffold00069 411830 3 TGC CAT scaffold376 ScafM INDEL 0020.scaffold00069 411839 1 . C scaffold376 Both SNP 0020.scaffold00069 411942 1 C T scaffold376 Both SNP 0020.scaffold00069 411948 1 A G scaffold376 Both SNP 0020.scaffold00069 412234 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 412305 2 CT .. scaffold376 ScafM INDEL 0020.scaffold00069 412312 1 . T scaffold376 ScafM SNP 0020.scaffold00069 412314 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 412354 1 . T scaffold376 ScafM SNP 0020.scaffold00069 412361 1 C T scaffold376 ScafM SNP 0020.scaffold00069 412476 1 G C scaffold376 ScafM SNP 0020.scaffold00069 412485 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 412487 1 A . scaffold376 ScafM SNP 0020.scaffold00069 412510 1 C A scaffold376 ScafM SNP 0020.scaffold00069 412518 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 412536 3 AGA ... scaffold376 ScafM INDEL 0020.scaffold00069 412548 2 .. GT scaffold376 ScafM SNP 0020.scaffold00069 412556 1 C G scaffold376 ScafM INDEL 0020.scaffold00069 412558 1 . A scaffold376 ScafM SNP 0020.scaffold00069 412561 1 C A scaffold376 ScafM SNP 0020.scaffold00069 412673 1 G A scaffold376 ScafM SNP 0020.scaffold00069 412679 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 412704 4 TTTT .... scaffold376 Both SNP 0020.scaffold00069 412923 1 T A scaffold376 Both SNP 0020.scaffold00069 412939 1 A T scaffold376 ScafM SNP 0020.scaffold00069 412955 1 A T scaffold376 ScafM SNP 0020.scaffold00069 412974 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 412995 1 . A scaffold376 ScafM SNP 0020.scaffold00069 412999 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 413004 1 . G scaffold376 ScafM SNP 0020.scaffold00069 413044 1 T G scaffold376 ScafM SNP 0020.scaffold00069 413113 1 C A scaffold376 ScafM SNP 0020.scaffold00069 413156 1 T C scaffold376 ScafM SNP 0020.scaffold00069 413160 1 G A scaffold376 ScafM SNP 0020.scaffold00069 413179 1 T G scaffold376 ScafM SNP 0020.scaffold00069 413186 1 T G scaffold376 ScafM SNP 0020.scaffold00069 413197 1 C G scaffold376 ScafM INDEL 0020.scaffold00069 413204 1 A . scaffold376 Both SNP 0020.scaffold00069 413236 1 C T scaffold376 Both SNP 0020.scaffold00069 413269 1 A G scaffold376 Both INDEL 0020.scaffold00069 413330 1 C . scaffold376 ScafM SNP 0020.scaffold00069 413349 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 413643 9 TATAGTTTT ......... scaffold376 ScafM INDEL 0020.scaffold00069 413656 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 413658 9 GGAAAAGGG ......... scaffold376 ScafM SNP 0020.scaffold00069 413697 1 A T scaffold376 ScafM SNP 0020.scaffold00069 413702 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 413704 1 A . scaffold376 ScafM INDEL 0020.scaffold00069 413708 4 AATT .... scaffold376 ScafM INDEL 0020.scaffold00069 413713 6 TTATAA ...... scaffold376 ScafM INDEL 0020.scaffold00069 413744 4 .... GTTG scaffold376 Both SNP 0020.scaffold00069 413807 1 A G scaffold376 Both SNP 0020.scaffold00069 414005 1 G A scaffold376 Both SNP 0020.scaffold00069 414133 1 G A scaffold376 Both SNP 0020.scaffold00069 414241 1 T G scaffold376 Both SNP 0020.scaffold00069 414290 1 G A scaffold376 Both SNP 0020.scaffold00069 414305 1 A G scaffold376 ScafM SNP 0020.scaffold00069 414353 1 G A scaffold376 ScafM SNP 0020.scaffold00069 414362 1 A T scaffold376 ScafM SNP 0020.scaffold00069 414380 1 G C scaffold376 ScafM INDEL 0020.scaffold00069 414392 1 T . scaffold376 ScafM SNP 0020.scaffold00069 414427 1 G A scaffold376 ScafM SNP 0020.scaffold00069 414431 1 A T scaffold376 ScafM SNP 0020.scaffold00069 414435 1 G A scaffold376 ScafM SNP 0020.scaffold00069 414458 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415235 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415289 2 AA GT scaffold376 ScafM SNP 0020.scaffold00069 415359 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415361 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 415372 2 AA .. scaffold376 ScafM INDEL 0020.scaffold00069 415375 5 TATTT ..... scaffold376 ScafM INDEL 0020.scaffold00069 415381 4 ACAT .... scaffold376 ScafM INDEL 0020.scaffold00069 415388 3 TGT ... scaffold376 ScafM SNP 0020.scaffold00069 415445 1 A C scaffold376 ScafM SNP 0020.scaffold00069 415448 1 G A scaffold376 ScafM SNP 0020.scaffold00069 415459 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415470 1 A C scaffold376 ScafM SNP 0020.scaffold00069 415496 1 G A scaffold376 ScafM SNP 0020.scaffold00069 415504 1 C T scaffold376 ScafM SNP 0020.scaffold00069 415508 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415511 3 ATT CAC scaffold376 ScafM SNP 0020.scaffold00069 415524 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415530 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415540 1 T A scaffold376 ScafM SNP 0020.scaffold00069 415548 1 T A scaffold376 ScafM SNP 0020.scaffold00069 415553 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415571 1 C T scaffold376 ScafM SNP 0020.scaffold00069 415574 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415579 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 415591 4 GTTG ..AC scaffold376 ScafM INDEL 0020.scaffold00069 415599 6 TGTTTT .....A scaffold376 ScafM SNP 0020.scaffold00069 415606 1 T G scaffold376 ScafM SNP 0020.scaffold00069 415650 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415660 1 A G scaffold376 ScafM SNP 0020.scaffold00069 415683 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 415702 8 GGATCAAC ........ scaffold376 ScafM INDEL 0020.scaffold00069 415711 3 AAG ... scaffold376 ScafM SNP 0020.scaffold00069 415720 1 C A scaffold376 ScafM SNP 0020.scaffold00069 415736 1 T C scaffold376 ScafM SNP 0020.scaffold00069 415752 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 415903 13 ............. AATTAGACTAAAT scaffold376 ScafM INDEL 0020.scaffold00069 415907 8 ........ ATATGGAG scaffold376 ScafM INDEL 0020.scaffold00069 415908 3 ... AGA scaffold376 ScafM SNP 0020.scaffold00069 415962 1 G A scaffold376 ScafM SNP 0020.scaffold00069 415995 2 CT TG scaffold376 ScafM SNP 0020.scaffold00069 416008 1 A G scaffold376 ScafM SNP 0020.scaffold00069 416011 1 A C scaffold376 ScafM SNP 0020.scaffold00069 416025 1 T A scaffold376 ScafM SNP 0020.scaffold00069 416037 1 T C scaffold376 ScafM SNP 0020.scaffold00069 416056 2 CG TT scaffold376 ScafM SNP 0020.scaffold00069 416130 1 G C scaffold376 ScafM SNP 0020.scaffold00069 416171 1 A T scaffold376 Both SNP 0020.scaffold00069 416371 1 T C scaffold376 Both SNP 0020.scaffold00069 416547 1 A C scaffold376 ScafM SNP 0020.scaffold00069 416566 1 T G scaffold376 ScafM SNP 0020.scaffold00069 416617 1 G A scaffold376 ScafM SNP 0020.scaffold00069 416620 1 A C scaffold376 ScafM SNP 0020.scaffold00069 416632 1 C T scaffold376 ScafM SNP 0020.scaffold00069 416634 1 T C scaffold376 ScafM SNP 0020.scaffold00069 416659 1 G A scaffold376 ScafM SNP 0020.scaffold00069 416670 1 A C scaffold376 ScafM SNP 0020.scaffold00069 416688 3 GAG TTA scaffold376 ScafM SNP 0020.scaffold00069 416701 1 A T scaffold376 ScafM SNP 0020.scaffold00069 416706 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 416709 1 T . scaffold376 ScafM SNP 0020.scaffold00069 416780 1 G T scaffold376 ScafM SNP 0020.scaffold00069 416830 1 C G scaffold376 ScafM SNP 0020.scaffold00069 416855 1 C A scaffold376 ScafM SNP 0020.scaffold00069 417762 1 T C scaffold376 ScafM SNP 0020.scaffold00069 417791 1 T A scaffold376 ScafM SNP 0020.scaffold00069 417795 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 417822 8 AATAGTCA ........ scaffold376 Both SNP 0020.scaffold00069 417913 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 418022 1 C . scaffold376 ScafM SNP 0020.scaffold00069 418038 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 418040 1 T . scaffold376 Both INDEL 0020.scaffold00069 418229 1 T . scaffold376 Both SNP 0020.scaffold00069 418269 1 A C scaffold376 Both SNP 0020.scaffold00069 418281 1 G A scaffold376 ReadM SNP 0020.scaffold00069 418338 1 T C - ReadM SNP 0020.scaffold00069 418387 1 A G - ScafM SNP 0020.scaffold00069 418575 1 T C scaffold376 ScafM SNP 0020.scaffold00069 418824 1 T C scaffold376 ScafM SNP 0020.scaffold00069 419158 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 419421 4 .... TATA scaffold376 ScafM INDEL 0020.scaffold00069 419573 2 .. TT scaffold376 ScafM SNP 0020.scaffold00069 419658 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 419687 1 T . scaffold376 ScafM SNP 0020.scaffold00069 419701 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 419743 2 .. TT scaffold376 ScafM INDEL 0020.scaffold00069 419756 4 TATT .... scaffold376 ScafM INDEL 0020.scaffold00069 419812 2 .. CA scaffold376 ScafM SNP 0020.scaffold00069 419826 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 419828 1 G . scaffold376 ScafM SNP 0020.scaffold00069 419885 1 A T scaffold376 ScafM SNP 0020.scaffold00069 419897 1 C A scaffold376 ScafM SNP 0020.scaffold00069 419899 1 A G scaffold376 ScafM SNP 0020.scaffold00069 419955 1 G T scaffold376 ScafM SNP 0020.scaffold00069 419977 1 C T scaffold376 ScafM SNP 0020.scaffold00069 421210 1 A G scaffold376 ScafM SNP 0020.scaffold00069 421212 1 G T scaffold376 ScafM SNP 0020.scaffold00069 421237 1 G A scaffold376 ReadM SNP 0020.scaffold00069 421548 1 G A - ReadM INDEL 0020.scaffold00069 421645 1 . A - ReadM SNP 0020.scaffold00069 421661 1 A T - ReadM SNP 0020.scaffold00069 421771 1 C A - ReadM SNP 0020.scaffold00069 421862 1 A T - ScafM SNP 0020.scaffold00069 421884 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 421886 1 . T scaffold376 ScafM SNP 0020.scaffold00069 421917 1 C T scaffold376 ScafM SNP 0020.scaffold00069 421923 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 421931 1 . T scaffold376 ScafM INDEL 0020.scaffold00069 421942 4 GTAA .... scaffold376 ScafM SNP 0020.scaffold00069 421947 1 A T scaffold376 ScafM SNP 0020.scaffold00069 421985 1 T C scaffold376 ScafM SNP 0020.scaffold00069 421994 1 A T scaffold376 ScafM SNP 0020.scaffold00069 422360 1 G A scaffold376 ScafM SNP 0020.scaffold00069 422393 1 T G scaffold376 ScafM SNP 0020.scaffold00069 422419 1 T A scaffold376 ScafM SNP 0020.scaffold00069 422423 2 TA CT scaffold376 ScafM SNP 0020.scaffold00069 422440 1 C T scaffold376 ScafM SNP 0020.scaffold00069 422483 1 T C scaffold376 ScafM SNP 0020.scaffold00069 422498 1 A G scaffold376 ScafM SNP 0020.scaffold00069 422784 1 G C scaffold376 ScafM SNP 0020.scaffold00069 422795 1 A T scaffold376 ScafM SNP 0020.scaffold00069 422806 1 A G scaffold376 ScafM SNP 0020.scaffold00069 422830 1 T A scaffold376 ScafM SNP 0020.scaffold00069 422881 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 422882 1 . A scaffold376 ScafM SNP 0020.scaffold00069 422928 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 423005 2 .. AA scaffold376 ScafM SNP 0020.scaffold00069 423009 1 G T scaffold376 ScafM SNP 0020.scaffold00069 423101 2 TA CG scaffold376 ScafM SNP 0020.scaffold00069 423110 1 C T scaffold376 ScafM SNP 0020.scaffold00069 423541 1 T A scaffold376 ScafM SNP 0020.scaffold00069 424927 1 A C scaffold376 ScafM SNP 0020.scaffold00069 424933 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 424952 3 AAC ... scaffold376 ScafM INDEL 0020.scaffold00069 424962 6 TTATAG ...... scaffold376 ScafM SNP 0020.scaffold00069 424977 1 G A scaffold376 ScafM SNP 0020.scaffold00069 424982 2 CG GC scaffold376 ScafM SNP 0020.scaffold00069 425000 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 425014 3 CAG ... scaffold376 ScafM SNP 0020.scaffold00069 425020 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 425023 1 G . scaffold376 ScafM INDEL 0020.scaffold00069 425025 2 .T CA scaffold376 ScafM SNP 0020.scaffold00069 425038 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 425041 1 . T scaffold376 ScafM SNP 0020.scaffold00069 425065 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 425074 14 .............. AGTACTGACTACTG scaffold376 ScafM SNP 0020.scaffold00069 425091 1 C T scaffold376 ScafM SNP 0020.scaffold00069 425107 1 C G scaffold376 ScafM SNP 0020.scaffold00069 425112 1 G T scaffold376 ScafM SNP 0020.scaffold00069 425114 1 A G scaffold376 ScafM SNP 0020.scaffold00069 425161 1 A C scaffold376 ScafM SNP 0020.scaffold00069 425166 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 425176 2 .. AT scaffold376 Both SNP 0020.scaffold00069 425208 1 C T scaffold376 Both SNP 0020.scaffold00069 425259 1 T G scaffold376 ScafM INDEL 0020.scaffold00069 425301 2 .. GG scaffold376 ScafM SNP 0020.scaffold00069 425303 1 G A scaffold376 ScafM SNP 0020.scaffold00069 425308 1 A G scaffold376 Both SNP 0020.scaffold00069 425400 1 G A scaffold376 Both SNP 0020.scaffold00069 425406 1 A C scaffold376 Both SNP 0020.scaffold00069 425556 1 A G scaffold376 ScafM SNP 0020.scaffold00069 425610 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 425613 1 . T scaffold376 ScafM SNP 0020.scaffold00069 425621 1 T G scaffold376 Both SNP 0020.scaffold00069 425647 1 T C scaffold376 Both SNP 0020.scaffold00069 426001 1 G A scaffold376 Both SNP 0020.scaffold00069 426135 1 G A scaffold376 Both INDEL 0020.scaffold00069 426171 1 . G scaffold376 Both SNP 0020.scaffold00069 426338 1 G C scaffold376 Both SNP 0020.scaffold00069 426449 1 G A scaffold376 Both SNP 0020.scaffold00069 426856 1 C G scaffold376 Both SNP 0020.scaffold00069 427031 1 T C scaffold376 Both SNP 0020.scaffold00069 427091 1 C T scaffold376 Both SNP 0020.scaffold00069 427274 1 G T scaffold376 Both SNP 0020.scaffold00069 427457 1 G T scaffold376 Both SNP 0020.scaffold00069 427524 1 G A scaffold376 ScafM SNP 0020.scaffold00069 427759 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 427806 1 . A scaffold376 ScafM SNP 0020.scaffold00069 427812 1 A T scaffold376 ScafM SNP 0020.scaffold00069 427974 1 G A scaffold376 ScafM SNP 0020.scaffold00069 428020 1 G A scaffold376 ScafM SNP 0020.scaffold00069 428104 1 A T scaffold376 ScafM SNP 0020.scaffold00069 428131 1 G A scaffold376 Both INDEL 0020.scaffold00069 428381 2 .. AG scaffold376 Both SNP 0020.scaffold00069 428540 1 A G scaffold376 ScafM SNP 0020.scaffold00069 428560 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 428569 1 G . scaffold376 ScafM SNP 0020.scaffold00069 428594 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 428603 3 ... AAT scaffold376 ReadM INDEL 0020.scaffold00069 430336 1 A . - Both SNP 0020.scaffold00069 430459 1 A G scaffold376 Both SNP 0020.scaffold00069 430463 1 T C scaffold376 ScafM SNP 0020.scaffold00069 430482 1 A T scaffold376 ScafM SNP 0020.scaffold00069 430527 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 430617 3 ... TGT scaffold376 ScafM SNP 0020.scaffold00069 430626 1 A T scaffold376 ScafM SNP 0020.scaffold00069 430667 1 G T scaffold376 ScafM SNP 0020.scaffold00069 430672 1 A G scaffold376 ScafM SNP 0020.scaffold00069 430901 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 430904 1 T . scaffold376 ScafM SNP 0020.scaffold00069 430939 1 T C scaffold376 ScafM SNP 0020.scaffold00069 430949 1 A C scaffold376 ScafM SNP 0020.scaffold00069 430975 1 G C scaffold376 ScafM SNP 0020.scaffold00069 431433 1 T G scaffold376 ScafM INDEL 0020.scaffold00069 431442 1 . T scaffold376 ScafM INDEL 0020.scaffold00069 431445 5 ..... AGTTG scaffold376 ScafM INDEL 0020.scaffold00069 431448 4 .... TCAG scaffold376 ScafM INDEL 0020.scaffold00069 431450 2 .. CA scaffold376 ScafM INDEL 0020.scaffold00069 431451 2 .. TT scaffold376 ScafM INDEL 0020.scaffold00069 431454 1 . T scaffold376 ScafM SNP 0020.scaffold00069 431526 1 C T scaffold376 ScafM SNP 0020.scaffold00069 431570 1 C T scaffold376 ScafM SNP 0020.scaffold00069 431590 1 T A scaffold376 ScafM SNP 0020.scaffold00069 431596 1 T A scaffold376 ScafM SNP 0020.scaffold00069 431655 1 T C scaffold376 ScafM SNP 0020.scaffold00069 431657 1 T G scaffold376 ScafM SNP 0020.scaffold00069 431661 1 A T scaffold376 ScafM SNP 0020.scaffold00069 431705 1 T G scaffold376 ScafM SNP 0020.scaffold00069 431710 1 T G scaffold376 ScafM INDEL 0020.scaffold00069 431738 2 .. AT scaffold376 Both SNP 0020.scaffold00069 431776 1 T C scaffold376 Both SNP 0020.scaffold00069 431780 1 G T scaffold376 Both SNP 0020.scaffold00069 431810 1 A T scaffold376 Both SNP 0020.scaffold00069 431892 1 C T scaffold376 ScafM SNP 0020.scaffold00069 431919 1 C A scaffold376 ScafM SNP 0020.scaffold00069 431921 1 A G scaffold376 ScafM SNP 0020.scaffold00069 431924 1 T C scaffold376 ScafM SNP 0020.scaffold00069 431942 1 C T scaffold376 ScafM SNP 0020.scaffold00069 431946 1 A G scaffold376 ScafM SNP 0020.scaffold00069 431983 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 431988 6 ...... CGCTGA scaffold376 ScafM SNP 0020.scaffold00069 432032 1 A G scaffold376 ScafM SNP 0020.scaffold00069 432036 1 G A scaffold376 ScafM SNP 0020.scaffold00069 432079 1 A G scaffold376 ScafM SNP 0020.scaffold00069 432083 1 G A scaffold376 ScafM SNP 0020.scaffold00069 432102 1 C T scaffold376 ScafM SNP 0020.scaffold00069 432114 1 C A scaffold376 ScafM SNP 0020.scaffold00069 432122 1 T A scaffold376 Both SNP 0020.scaffold00069 432180 1 T A scaffold376 Both SNP 0020.scaffold00069 432195 1 G T scaffold376 ScafM SNP 0020.scaffold00069 432367 1 T C scaffold376 ScafM SNP 0020.scaffold00069 432372 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 432418 3 ... AAT scaffold376 ScafM SNP 0020.scaffold00069 432433 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 432452 17 ................. GTGCACATTACAGAAGG scaffold376 ScafM INDEL 0020.scaffold00069 432456 14 .............. TGAAATTACAAATT scaffold376 ScafM SNP 0020.scaffold00069 432521 1 T C scaffold376 ScafM SNP 0020.scaffold00069 432539 1 C A scaffold376 ScafM SNP 0020.scaffold00069 432997 1 G A scaffold376 ScafM SNP 0020.scaffold00069 433003 1 A C scaffold376 ScafM SNP 0020.scaffold00069 433019 1 G T scaffold376 ScafM SNP 0020.scaffold00069 433059 1 T G scaffold376 ScafM SNP 0020.scaffold00069 433061 1 G A scaffold376 ScafM SNP 0020.scaffold00069 433071 1 T C scaffold376 ScafM SNP 0020.scaffold00069 433077 1 A G scaffold376 ScafM SNP 0020.scaffold00069 433116 1 C T scaffold376 ScafM SNP 0020.scaffold00069 433160 1 A G scaffold376 ScafM SNP 0020.scaffold00069 433216 2 TG GA scaffold376 ScafM SNP 0020.scaffold00069 433224 1 G A scaffold376 ScafM SNP 0020.scaffold00069 433243 1 T G scaffold376 ScafM SNP 0020.scaffold00069 433247 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 433256 1 . A scaffold376 ScafM SNP 0020.scaffold00069 433265 1 G T scaffold376 ScafM SNP 0020.scaffold00069 433278 1 T G scaffold376 ScafM SNP 0020.scaffold00069 433281 1 C T scaffold376 ScafM SNP 0020.scaffold00069 433306 1 A C scaffold376 ScafM SNP 0020.scaffold00069 433314 2 GG AT scaffold376 ScafM INDEL 0020.scaffold00069 433317 1 T . scaffold376 ScafM SNP 0020.scaffold00069 433329 1 T C scaffold376 ScafM SNP 0020.scaffold00069 433355 1 G T scaffold376 ScafM SNP 0020.scaffold00069 433360 1 C T scaffold376 ScafM SNP 0020.scaffold00069 433362 2 AG GC scaffold376 ScafM SNP 0020.scaffold00069 433402 1 A G scaffold376 ScafM SNP 0020.scaffold00069 433428 1 C T scaffold376 ReadM SNP 0020.scaffold00069 433590 1 G A - ScafM INDEL 0020.scaffold00069 433892 1 . T scaffold376 ScafM INDEL 0020.scaffold00069 433947 4 .... ATAA scaffold376 ScafM INDEL 0020.scaffold00069 433948 2 .. TT scaffold376 Both SNP 0020.scaffold00069 434000 1 C A scaffold376 Both INDEL 0020.scaffold00069 434065 1 G . scaffold376 ScafM SNP 0020.scaffold00069 434097 1 A T scaffold376 ScafM SNP 0020.scaffold00069 434114 1 G C scaffold376 ScafM SNP 0020.scaffold00069 434116 1 A T scaffold376 ScafM SNP 0020.scaffold00069 434120 1 C G scaffold376 ScafM SNP 0020.scaffold00069 434164 1 T G scaffold376 ScafM SNP 0020.scaffold00069 434170 1 T C scaffold376 ScafM SNP 0020.scaffold00069 434172 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434218 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434241 1 T G scaffold376 ScafM SNP 0020.scaffold00069 434259 1 T C scaffold376 ScafM SNP 0020.scaffold00069 434272 1 C G scaffold376 ScafM SNP 0020.scaffold00069 434302 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434306 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434314 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434373 1 C G scaffold376 ScafM SNP 0020.scaffold00069 434397 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434493 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434498 1 T A scaffold376 ScafM SNP 0020.scaffold00069 434503 1 A G scaffold376 ScafM SNP 0020.scaffold00069 434531 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 434575 1 G . scaffold376 ScafM SNP 0020.scaffold00069 434594 1 G T scaffold376 ScafM SNP 0020.scaffold00069 434603 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434624 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434661 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434668 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434686 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434689 1 G A scaffold376 ScafM SNP 0020.scaffold00069 434695 1 G T scaffold376 ScafM SNP 0020.scaffold00069 434705 1 C G scaffold376 ScafM SNP 0020.scaffold00069 434708 1 T C scaffold376 ScafM SNP 0020.scaffold00069 434713 2 CA TT scaffold376 ScafM SNP 0020.scaffold00069 434718 1 C T scaffold376 ScafM SNP 0020.scaffold00069 434748 1 C A scaffold376 ScafM SNP 0020.scaffold00069 434765 1 T C scaffold376 ScafM SNP 0020.scaffold00069 434777 1 A C scaffold376 ScafM SNP 0020.scaffold00069 434788 1 T C scaffold376 ScafM SNP 0020.scaffold00069 434790 1 T C scaffold376 Both SNP 0020.scaffold00069 434814 1 G T scaffold376 ReadM SNP 0020.scaffold00069 434879 1 C A - ReadM SNP 0020.scaffold00069 435029 1 C T - ScafM SNP 0020.scaffold00069 435350 1 G T scaffold376 ScafM SNP 0020.scaffold00069 435397 1 C T scaffold376 ScafM SNP 0020.scaffold00069 435399 1 C A scaffold376 ScafM SNP 0020.scaffold00069 435417 1 T C scaffold376 ScafM SNP 0020.scaffold00069 435452 1 T G scaffold376 ScafM SNP 0020.scaffold00069 435495 1 T C scaffold376 ScafM SNP 0020.scaffold00069 435509 1 T G scaffold376 ScafM SNP 0020.scaffold00069 435512 1 C T scaffold376 ScafM SNP 0020.scaffold00069 435517 1 C A scaffold376 ScafM SNP 0020.scaffold00069 435528 1 G A scaffold376 Both SNP 0020.scaffold00069 435605 1 T C scaffold376 Both SNP 0020.scaffold00069 435607 1 T C scaffold376 ScafM SNP 0020.scaffold00069 435622 1 A G scaffold376 ScafM SNP 0020.scaffold00069 435648 1 T A scaffold376 ScafM SNP 0020.scaffold00069 435673 2 AT CC scaffold376 ScafM SNP 0020.scaffold00069 435741 1 G T scaffold376 ReadM SNP 0020.scaffold00069 435776 1 T C - ReadM SNP 0020.scaffold00069 435800 1 A G - ReadM SNP 0020.scaffold00069 435945 1 C T - ReadM SNP 0020.scaffold00069 435987 1 T C - ReadM SNP 0020.scaffold00069 436043 1 A C - ReadM INDEL 0020.scaffold00069 436050 1 . C - ReadM SNP 0020.scaffold00069 436344 1 T A - ReadM INDEL 0020.scaffold00069 436476 1 A . - ReadM SNP 0020.scaffold00069 436482 1 T G - ReadM SNP 0020.scaffold00069 436505 1 G C - ReadM SNP 0020.scaffold00069 436530 1 C T - ScafM SNP 0020.scaffold00069 436997 1 C T scaffold376 ScafM SNP 0020.scaffold00069 437005 1 G T scaffold376 ScafM SNP 0020.scaffold00069 437018 1 C G scaffold376 ScafM SNP 0020.scaffold00069 437035 1 G A scaffold376 ScafM SNP 0020.scaffold00069 437047 1 C A scaffold376 ScafM SNP 0020.scaffold00069 437556 1 A G scaffold376 ScafM SNP 0020.scaffold00069 437573 1 A G scaffold376 ScafM SNP 0020.scaffold00069 437584 1 T C scaffold376 ScafM SNP 0020.scaffold00069 437586 1 C T scaffold376 Both INDEL 0020.scaffold00069 437624 1 . T scaffold376 Both SNP 0020.scaffold00069 437696 1 A C scaffold376 Both SNP 0020.scaffold00069 437742 1 T C scaffold376 Both SNP 0020.scaffold00069 437748 1 C T scaffold376 ScafM SNP 0020.scaffold00069 437812 1 T A scaffold376 ScafM SNP 0020.scaffold00069 437817 1 C T scaffold376 ScafM SNP 0020.scaffold00069 437832 1 A G scaffold376 ScafM SNP 0020.scaffold00069 437846 1 C T scaffold376 ScafM SNP 0020.scaffold00069 437859 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 437881 1 A . scaffold376 ScafM INDEL 0020.scaffold00069 437893 6 ...... CTGTTC scaffold376 Both SNP 0020.scaffold00069 437917 1 G A scaffold376 Both SNP 0020.scaffold00069 437921 1 T C scaffold376 Both SNP 0020.scaffold00069 437974 1 T A scaffold376 Both INDEL 0020.scaffold00069 438052 1 . A scaffold376 Both SNP 0020.scaffold00069 438080 1 G A scaffold376 Both SNP 0020.scaffold00069 438119 1 A G scaffold376 Both SNP 0020.scaffold00069 438131 1 T C scaffold376 Both SNP 0020.scaffold00069 438230 1 A T scaffold376 Both SNP 0020.scaffold00069 438296 1 T A scaffold376 Both SNP 0020.scaffold00069 438424 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 438475 3 GTT ... scaffold376 ReadM SNP 0020.scaffold00069 438667 1 G C - ReadM SNP 0020.scaffold00069 438767 1 T C - ReadM SNP 0020.scaffold00069 438785 1 C T - Both SNP 0020.scaffold00069 438842 1 A C scaffold376 Both INDEL 0020.scaffold00069 438900 1 . A scaffold376 Both SNP 0020.scaffold00069 438911 1 C G scaffold376 Both SNP 0020.scaffold00069 438997 1 G A scaffold376 Both SNP 0020.scaffold00069 439001 1 G A scaffold376 Both SNP 0020.scaffold00069 439251 1 G A scaffold376 Both SNP 0020.scaffold00069 439436 1 A C scaffold376 Both SNP 0020.scaffold00069 439463 1 T A scaffold376 Both SNP 0020.scaffold00069 439535 1 A C scaffold376 Both SNP 0020.scaffold00069 439541 1 A G scaffold376 Both SNP 0020.scaffold00069 439676 1 G A scaffold376 ScafM SNP 0020.scaffold00069 439693 2 GA CC scaffold376 Both SNP 0020.scaffold00069 439796 1 T C scaffold376 Both SNP 0020.scaffold00069 439820 1 C G scaffold376 Both SNP 0020.scaffold00069 440025 1 C G scaffold376 Both SNP 0020.scaffold00069 440036 1 T G scaffold376 Both SNP 0020.scaffold00069 440259 1 G T scaffold376 Both SNP 0020.scaffold00069 440388 1 C A scaffold376 Both SNP 0020.scaffold00069 440647 1 A C scaffold376 Both SNP 0020.scaffold00069 440653 1 A C scaffold376 ScafM SNP 0020.scaffold00069 440682 1 A T scaffold376 ScafM INDEL 0020.scaffold00069 440685 2 .. CA scaffold376 ScafM INDEL 0020.scaffold00069 440689 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 440693 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 440695 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 440704 1 T . scaffold376 Both SNP 0020.scaffold00069 440856 1 C T scaffold376 Both SNP 0020.scaffold00069 440861 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 440940 1 A . scaffold376 ScafM SNP 0020.scaffold00069 440958 1 A G scaffold376 Both SNP 0020.scaffold00069 441028 1 A C scaffold376 Both SNP 0020.scaffold00069 441079 1 G A scaffold376 Both SNP 0020.scaffold00069 441155 1 C T scaffold376 Both SNP 0020.scaffold00069 441342 1 G A scaffold376 Both SNP 0020.scaffold00069 441661 1 G A scaffold376 Both SNP 0020.scaffold00069 441668 1 T A scaffold376 Both SNP 0020.scaffold00069 441754 1 T A scaffold376 Both SNP 0020.scaffold00069 441774 1 A T scaffold376 Both SNP 0020.scaffold00069 441793 1 T A scaffold376 ScafM SNP 0020.scaffold00069 441859 1 T C scaffold376 Both SNP 0020.scaffold00069 441863 1 T G scaffold376 Both SNP 0020.scaffold00069 442255 1 T C scaffold376 ScafM SNP 0020.scaffold00069 442295 1 T C scaffold376 Both SNP 0020.scaffold00069 442469 1 C T scaffold376 ScafM SNP 0020.scaffold00069 442562 1 A G scaffold376 ScafM SNP 0020.scaffold00069 442588 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 442691 3 ... AAT scaffold376 ScafM SNP 0020.scaffold00069 442734 1 G A scaffold376 ScafM SNP 0020.scaffold00069 442790 1 A T scaffold376 ReadM SNP 0020.scaffold00069 442997 1 A G - ScafM SNP 0020.scaffold00069 443197 1 G A scaffold4822 ScafM SNP 0020.scaffold00069 443227 1 C T scaffold4822 ScafM SNP 0020.scaffold00069 443250 1 C T scaffold4822 ScafM SNP 0020.scaffold00069 443253 1 C A scaffold4822 ScafM SNP 0020.scaffold00069 443283 1 T A scaffold4822 Both SNP 0020.scaffold00069 443321 1 A T scaffold376 ScafM SNP 0020.scaffold00069 443695 1 T G scaffold376 ScafM SNP 0020.scaffold00069 443698 1 T C scaffold376 ScafM SNP 0020.scaffold00069 443844 1 T A scaffold376 ScafM SNP 0020.scaffold00069 443891 1 G A scaffold376 ScafM SNP 0020.scaffold00069 443903 1 T A scaffold376 ScafM SNP 0020.scaffold00069 443920 1 T C scaffold376 ScafM SNP 0020.scaffold00069 443960 1 C T scaffold376 Both SNP 0020.scaffold00069 444118 1 C T scaffold376 Both SNP 0020.scaffold00069 444169 1 G A scaffold376 Both SNP 0020.scaffold00069 444186 1 T C scaffold376 Both SNP 0020.scaffold00069 444335 1 T A scaffold376 Both INDEL 0020.scaffold00069 444410 1 A . scaffold376 ScafM SNP 0020.scaffold00069 444558 2 CG TA scaffold376 ScafM INDEL 0020.scaffold00069 444583 1 A . scaffold376 ScafM SNP 0020.scaffold00069 444608 1 G A scaffold376 ScafM SNP 0020.scaffold00069 444615 1 G C scaffold376 ScafM SNP 0020.scaffold00069 444634 1 C T scaffold376 ScafM SNP 0020.scaffold00069 444649 1 A T scaffold376 Both SNP 0020.scaffold00069 444674 1 C T scaffold376 Both SNP 0020.scaffold00069 444684 1 G C scaffold376 Both SNP 0020.scaffold00069 444694 1 G A scaffold376 Both SNP 0020.scaffold00069 444778 1 C G scaffold376 Both SNP 0020.scaffold00069 444853 1 T A scaffold376 Both SNP 0020.scaffold00069 444928 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 445335 4 CCCG .... scaffold376 ScafM SNP 0020.scaffold00069 445341 1 G T scaffold376 Both SNP 0020.scaffold00069 445441 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 445600 8 GGTCAAGC ........ scaffold376 ScafM SNP 0020.scaffold00069 445688 1 C T scaffold376 ScafM SNP 0020.scaffold00069 445693 1 A G scaffold376 ScafM SNP 0020.scaffold00069 445707 1 C T scaffold376 ScafM SNP 0020.scaffold00069 445731 1 G A scaffold376 Both SNP 0020.scaffold00069 445910 1 C T scaffold376 Both SNP 0020.scaffold00069 445955 1 C T scaffold376 Both SNP 0020.scaffold00069 446148 1 T C scaffold376 ScafM SNP 0020.scaffold00069 446196 1 G T scaffold376 ScafM SNP 0020.scaffold00069 446201 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 446204 1 G . scaffold376 ScafM SNP 0020.scaffold00069 446224 1 T A scaffold376 Both SNP 0020.scaffold00069 446549 1 A T scaffold376 Both SNP 0020.scaffold00069 446559 1 G T scaffold376 Both SNP 0020.scaffold00069 446691 1 T G scaffold376 Both SNP 0020.scaffold00069 446758 1 T C scaffold376 Both SNP 0020.scaffold00069 446933 1 T A scaffold376 Both SNP 0020.scaffold00069 446960 1 T G scaffold376 ScafM SNP 0020.scaffold00069 447137 1 A T scaffold376 ScafM SNP 0020.scaffold00069 447162 1 A T scaffold376 ScafM SNP 0020.scaffold00069 448793 1 T C scaffold376 ScafM SNP 0020.scaffold00069 448800 1 G C scaffold376 ScafM SNP 0020.scaffold00069 448818 2 TA GG scaffold376 ScafM SNP 0020.scaffold00069 448833 1 G T scaffold376 ScafM SNP 0020.scaffold00069 448836 3 CTC AGT scaffold376 ScafM INDEL 0020.scaffold00069 448843 2 .. AT scaffold376 ScafM SNP 0020.scaffold00069 448845 1 C G scaffold376 ScafM SNP 0020.scaffold00069 448874 1 G C scaffold376 ScafM INDEL 0020.scaffold00069 448879 9 ......... AATTTAATT scaffold376 ScafM SNP 0020.scaffold00069 448896 1 A T scaffold376 ScafM SNP 0020.scaffold00069 448914 2 GC AT scaffold376 ScafM INDEL 0020.scaffold00069 448936 1 . A scaffold376 ReadM INDEL 0020.scaffold00069 452273 1 . C - Both SNP 0020.scaffold00069 452298 1 G T scaffold376 ScafM INDEL 0020.scaffold00069 452418 1 . A scaffold376 ScafM SNP 0020.scaffold00069 452487 1 C T scaffold376 ScafM SNP 0020.scaffold00069 452491 1 T A scaffold376 ScafM SNP 0020.scaffold00069 452541 1 T C scaffold376 ScafM SNP 0020.scaffold00069 452546 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 452583 6 ...... AAAAAC scaffold376 ScafM SNP 0020.scaffold00069 452613 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 452617 1 . T scaffold376 ScafM SNP 0020.scaffold00069 452730 1 A G scaffold376 ScafM SNP 0020.scaffold00069 452745 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 452831 2 .G AA scaffold376 ScafM SNP 0020.scaffold00069 452860 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 452875 1 T . scaffold376 ScafM SNP 0020.scaffold00069 452877 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 452900 1 T . scaffold376 ScafM SNP 0020.scaffold00069 452902 2 TT AA scaffold376 ScafM SNP 0020.scaffold00069 452932 1 A G scaffold376 ScafM SNP 0020.scaffold00069 452966 1 T C scaffold376 ScafM SNP 0020.scaffold00069 453001 1 G T scaffold376 ScafM SNP 0020.scaffold00069 453014 1 A G scaffold376 Both SNP 0020.scaffold00069 453056 1 C T scaffold376 Both SNP 0020.scaffold00069 453059 1 T C scaffold376 Both SNP 0020.scaffold00069 453077 1 T A scaffold376 ReadM SNP 0020.scaffold00069 453161 1 T G - ReadM SNP 0020.scaffold00069 453223 1 A T - ReadM SNP 0020.scaffold00069 453229 1 T C - ReadM INDEL 0020.scaffold00069 453293 1 G . - Both SNP 0020.scaffold00069 453587 1 A G scaffold376 Both SNP 0020.scaffold00069 453641 1 G A scaffold376 Both SNP 0020.scaffold00069 453715 1 C T scaffold376 Both SNP 0020.scaffold00069 453787 1 T C scaffold376 Both SNP 0020.scaffold00069 453869 1 T A scaffold376 Both SNP 0020.scaffold00069 453898 1 A G scaffold376 Both SNP 0020.scaffold00069 454015 1 C G scaffold376 ReadM SNP 0020.scaffold00069 454051 1 A G - ScafM SNP 0020.scaffold00069 454198 1 C A scaffold376 ScafM SNP 0020.scaffold00069 454280 1 G T scaffold376 ScafM SNP 0020.scaffold00069 454340 1 C T scaffold376 ScafM SNP 0020.scaffold00069 454361 1 A G scaffold376 ScafM SNP 0020.scaffold00069 454448 1 A G scaffold376 ScafM SNP 0020.scaffold00069 454451 3 GCA ATG scaffold376 ScafM SNP 0020.scaffold00069 454467 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 454471 1 . T scaffold376 ScafM SNP 0020.scaffold00069 456108 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 456155 3 ... TAA scaffold376 ScafM SNP 0020.scaffold00069 456162 1 C T scaffold376 ScafM INDEL 0020.scaffold00069 456170 2 TT .. scaffold376 ScafM SNP 0020.scaffold00069 456186 1 G A scaffold376 ScafM SNP 0020.scaffold00069 456222 1 C A scaffold376 ScafM INDEL 0020.scaffold00069 456230 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 456232 1 C . scaffold376 ScafM SNP 0020.scaffold00069 456234 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 456235 1 . C scaffold376 ScafM SNP 0020.scaffold00069 456243 2 GA AG scaffold376 ScafM SNP 0020.scaffold00069 456267 1 A G scaffold376 ScafM INDEL 0020.scaffold00069 456278 3 ... TAT scaffold376 ScafM SNP 0020.scaffold00069 456284 1 G A scaffold376 ScafM SNP 0020.scaffold00069 456303 1 T A scaffold376 ScafM SNP 0020.scaffold00069 456315 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 456327 1 . A scaffold376 ScafM SNP 0020.scaffold00069 456334 1 G A scaffold376 ScafM SNP 0020.scaffold00069 456364 1 T C scaffold376 ScafM SNP 0020.scaffold00069 456367 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 456406 6 ...... TCTTAA scaffold376 ScafM INDEL 0020.scaffold00069 456408 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 456419 2 .. TT scaffold376 ScafM SNP 0020.scaffold00069 456423 1 C T scaffold376 ScafM SNP 0020.scaffold00069 456441 1 A G scaffold376 ScafM SNP 0020.scaffold00069 456924 1 C T scaffold376 ScafM SNP 0020.scaffold00069 456932 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 456935 3 ACA ... scaffold376 ScafM INDEL 0020.scaffold00069 456943 2 CT .. scaffold376 ScafM INDEL 0020.scaffold00069 456973 2 TC .. scaffold376 ScafM INDEL 0020.scaffold00069 456983 2 AA .. scaffold376 ScafM SNP 0020.scaffold00069 456987 1 A G scaffold376 ScafM SNP 0020.scaffold00069 457161 1 A C scaffold376 ScafM INDEL 0020.scaffold00069 457215 2 .. AT scaffold376 ScafM INDEL 0020.scaffold00069 457234 5 TTAGT ....C scaffold376 ScafM SNP 0020.scaffold00069 457254 1 T C scaffold376 ScafM SNP 0020.scaffold00069 457293 1 T G scaffold376 ScafM INDEL 0020.scaffold00069 457305 1 . T scaffold376 ScafM SNP 0020.scaffold00069 457315 1 T A scaffold376 ScafM SNP 0020.scaffold00069 457359 1 C G scaffold376 ScafM SNP 0020.scaffold00069 457398 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 457446 7 CCGTGTA ....... scaffold376 ScafM SNP 0020.scaffold00069 457456 1 T A scaffold376 ScafM INDEL 0020.scaffold00069 457477 4 AAAA .... scaffold376 ScafM SNP 0020.scaffold00069 457488 1 G A scaffold376 ScafM SNP 0020.scaffold00069 457495 1 G A scaffold376 ScafM INDEL 0020.scaffold00069 457655 4 .... ATTA scaffold376 ScafM INDEL 0020.scaffold00069 457666 1 . A scaffold376 ScafM INDEL 0020.scaffold00069 457683 2 TC .A scaffold376 ScafM SNP 0020.scaffold00069 457688 1 A C scaffold376 ScafM SNP 0020.scaffold00069 457705 1 A G scaffold376 ScafM SNP 0020.scaffold00069 457716 1 A G scaffold376 ScafM SNP 0020.scaffold00069 457721 1 A T scaffold376 ScafM SNP 0020.scaffold00069 457740 1 C A scaffold376 ScafM SNP 0020.scaffold00069 457749 1 T G scaffold376 ScafM SNP 0020.scaffold00069 457761 1 T C scaffold376 ScafM INDEL 0020.scaffold00069 457769 1 . C scaffold376 ScafM INDEL 0020.scaffold00069 457770 3 ... TGC scaffold376 ScafM SNP 0020.scaffold00069 457784 1 G C scaffold376 ScafM SNP 0020.scaffold00069 457788 2 GA TT scaffold376 ScafM INDEL 0020.scaffold00069 457793 1 A . scaffold376 ScafM INDEL 0020.scaffold00069 457795 2 .T GA scaffold376 ScafM SNP 0020.scaffold00069 457798 1 C G scaffold376 ScafM SNP 0020.scaffold00069 457803 1 C T scaffold376 ScafM SNP 0020.scaffold00069 457805 4 AATT CTAC scaffold376 ScafM INDEL 0020.scaffold00069 457827 15 AGCCTCGAATAATAC ............... scaffold376 ScafM INDEL 0020.scaffold00069 457843 1 C . scaffold376 ScafM INDEL 0020.scaffold00069 457847 1 A . scaffold376 ScafM INDEL 0020.scaffold00069 457851 2 TT .. scaffold376 ScafM INDEL 0020.scaffold00069 457876 5 GGATT ..... scaffold376 ScafM INDEL 0020.scaffold00069 457882 2 AG .. scaffold376 ScafM SNP 0020.scaffold00069 457890 1 G T scaffold376 ScafM SNP 0020.scaffold00069 457899 1 A G scaffold376 ScafM SNP 0020.scaffold00069 457945 1 G A scaffold376 ScafM INDEL 0021.scaffold00073 18044 14 .............. CACCCCCCCCCCCC scaffold4636 ScafM INDEL 0021.scaffold00073 22504 4 TGAA .... scaffold4636 ScafM SNP 0021.scaffold00073 22522 1 C T scaffold4636 ScafM INDEL 0021.scaffold00073 22539 7 ATTGCGG ....... scaffold4636 ScafM INDEL 0021.scaffold00073 22547 1 A . scaffold4636 ScafM SNP 0021.scaffold00073 22551 1 C G scaffold4636 ScafM SNP 0021.scaffold00073 22557 1 A G scaffold4636 ScafM SNP 0021.scaffold00073 22570 1 T C scaffold4636 ScafM SNP 0021.scaffold00073 22585 1 T C scaffold4636 ScafM SNP 0021.scaffold00073 22618 1 C A scaffold4636 ScafM SNP 0021.scaffold00073 22663 2 CT GC scaffold4636 ScafM SNP 0021.scaffold00073 22682 1 A C scaffold4636 ScafM INDEL 0021.scaffold00073 22683 1 . A scaffold4636 ScafM INDEL 0021.scaffold00073 22686 2 CC .G scaffold4636 ScafM SNP 0021.scaffold00073 22691 2 AC TT scaffold4636 ScafM INDEL 0021.scaffold00073 30925 2 CT .. scaffold4636 ReadM INDEL 0021.scaffold00073 52815 2 AT .. - ScafM INDEL 0021.scaffold00073 55506 1 . T scaffold4636 ScafM SNP 0021.scaffold00073 62560 1 G A scaffold3547 Both SNP 0021.scaffold00073 62796 1 T C scaffold3547 Both SNP 0021.scaffold00073 62961 1 G C scaffold3547 Both SNP 0021.scaffold00073 63025 1 T A scaffold3547 Both SNP 0021.scaffold00073 63191 1 G A scaffold3547 ScafM INDEL 0021.scaffold00073 78895 19 ................... TTTTTTTTTTTTTTTTTTT scaffold4636 ScafM SNP 0021.scaffold00073 78928 6 CAACAA TTTTTT scaffold4636 ScafM SNP 0021.scaffold00073 158101 1 G A scaffold377 ScafM INDEL 0021.scaffold00073 177045 11 ........... GGGGGGGGGGG scaffold377 ScafM INDEL 0021.scaffold00073 199537 1 . C scaffold377 ScafM SNP 0021.scaffold00073 199539 1 A C scaffold377 ScafM SNP 0021.scaffold00073 218127 1 G A scaffold11591 ScafM SNP 0021.scaffold00073 218181 1 A C scaffold11591 ScafM SNP 0021.scaffold00073 223399 1 C G scaffold7027 ScafM INDEL 0021.scaffold00073 223467 1 . C scaffold7027 ScafM SNP 0021.scaffold00073 223578 1 C G scaffold7027 ScafM SNP 0021.scaffold00073 223588 1 G A scaffold7027 ScafM SNP 0021.scaffold00073 223632 1 A G scaffold7027 ScafM SNP 0021.scaffold00073 223665 1 C T scaffold7027 ScafM SNP 0021.scaffold00073 223676 1 A C scaffold7027 ScafM SNP 0021.scaffold00073 223680 1 C T scaffold7027 ScafM SNP 0021.scaffold00073 234179 2 GC AT scaffold6201 ScafM SNP 0021.scaffold00073 234242 1 T C scaffold6201 ScafM SNP 0021.scaffold00073 234244 1 C T scaffold6201 ScafM SNP 0021.scaffold00073 234257 1 A C scaffold6201 ScafM INDEL 0021.scaffold00073 333794 1 T . scaffold38829 ScafM SNP 0021.scaffold00073 377099 1 C T scaffold7445 ReadM SNP 0021.scaffold00073 402607 1 C G - ScafM SNP 0021.scaffold00073 403034 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403039 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403057 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403064 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403074 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403084 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403093 1 G A scaffold6165 ScafM INDEL 0021.scaffold00073 403102 1 . G scaffold6165 ScafM SNP 0021.scaffold00073 403116 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403127 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403139 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403151 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403153 2 GA AG scaffold6165 ScafM SNP 0021.scaffold00073 403184 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403188 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403190 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403194 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403197 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403199 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403221 1 A G scaffold6165 ScafM SNP 0021.scaffold00073 403234 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403243 1 G T scaffold6165 ScafM SNP 0021.scaffold00073 403250 2 TA CC scaffold6165 ScafM SNP 0021.scaffold00073 403253 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403264 1 C G scaffold6165 ScafM SNP 0021.scaffold00073 403269 2 GA AG scaffold6165 ScafM SNP 0021.scaffold00073 403295 1 G A scaffold6165 ScafM SNP 0021.scaffold00073 403298 1 T C scaffold6165 ScafM SNP 0021.scaffold00073 403311 1 G T scaffold6165 ScafM SNP 0021.scaffold00073 403322 1 A C scaffold6165 ScafM INDEL 0021.scaffold00073 404446 76 ............................................................................ ACTAACATCCACCTTTAACCTTAACTTTTCCTATAATTTCTTCTTCTTTTAATCTTGTTCCTCGTAATCGTGACAT scaffold28140 ScafM SNP 0021.scaffold00073 478015 1 T C scaffold13316 ScafM SNP 0021.scaffold00073 478086 1 T C scaffold13316 ScafM SNP 0021.scaffold00073 478225 1 C T scaffold13316 ScafM SNP 0021.scaffold00073 478504 2 GT AA scaffold13316 ScafM SNP 0021.scaffold00073 478510 1 C T scaffold13316 ScafM SNP 0021.scaffold00073 478521 1 G A scaffold13316 ScafM SNP 0021.scaffold00073 478529 1 T C scaffold13316 ScafM SNP 0021.scaffold00073 478532 1 T G scaffold13316 ScafM SNP 0021.scaffold00073 478540 1 G T scaffold13316 ScafM SNP 0021.scaffold00073 478549 1 C T scaffold13316 ScafM SNP 0021.scaffold00073 478552 1 G A scaffold13316 ScafM SNP 0021.scaffold00073 478574 1 G A scaffold13316 ScafM SNP 0021.scaffold00073 478576 1 A G scaffold13316 ScafM SNP 0021.scaffold00073 501574 1 A T scaffold13316 ScafM SNP 0021.scaffold00073 502650 1 C G scaffold13316 ScafM SNP 0021.scaffold00073 502826 1 T C scaffold13316 ScafM SNP 0021.scaffold00073 503141 1 C G scaffold13316 ReadM INDEL 0021.scaffold00073 503937 1 . T - Both INDEL 0021.scaffold00073 503939 1 . C scaffold13316 ScafM SNP 0021.scaffold00073 503943 1 A C scaffold13316 ScafM SNP 0021.scaffold00073 504319 1 C T scaffold13316 ScafM SNP 0021.scaffold00073 504354 1 C A scaffold13316 ScafM SNP 0021.scaffold00073 504363 1 T C scaffold13316 ScafM SNP 0021.scaffold00073 504471 1 G A scaffold13316 ScafM SNP 0021.scaffold00073 515483 1 A G scaffold16178 ScafM SNP 0021.scaffold00073 515551 1 T C scaffold16178 ScafM INDEL 0021.scaffold00073 541745 1 . A scaffold7991 Both INDEL 0021.scaffold00073 541760 1 A . scaffold7991 ScafM SNP 0021.scaffold00073 545942 2 TC AT scaffold7991 ScafM SNP 0021.scaffold00073 552115 1 A G scaffold7991 ScafM SNP 0021.scaffold00073 602857 1 T C scaffold2094 ScafM INDEL 0021.scaffold00073 602858 1 . A scaffold2094 ScafM SNP 0021.scaffold00073 622310 1 A G scaffold2094 ScafM INDEL 0021.scaffold00073 623771 1 . T scaffold2094 ScafM INDEL 0021.scaffold00073 696511 13 ACATTCTTGTTCT ............. scaffold2257 ReadM SNP 0021.scaffold00073 765497 1 C T - ScafM SNP 0021.scaffold00073 776854 1 T C scaffold2807 ScafM INDEL 0021.scaffold00073 783403 1 . T scaffold24181 ScafM INDEL 0021.scaffold00073 797056 19 ................... GTTTTTTTTTTTTTTTTTT scaffold24181 ScafM INDEL 0021.scaffold00073 832717 1 . T scaffold6391 ScafM SNP 0021.scaffold00073 854021 1 G A scaffold10534 ScafM SNP 0021.scaffold00073 854027 1 A G scaffold10534 ScafM INDEL 0021.scaffold00073 854033 1 A . scaffold10534 ScafM SNP 0021.scaffold00073 854038 1 C G scaffold10534 ScafM SNP 0021.scaffold00073 854092 1 G C scaffold10534 ScafM SNP 0021.scaffold00073 854211 1 C A scaffold10534 ScafM SNP 0021.scaffold00073 854234 2 AA TG scaffold10534 ScafM SNP 0021.scaffold00073 854261 1 A G scaffold10534 ScafM SNP 0021.scaffold00073 854265 1 C A scaffold10534 ScafM SNP 0021.scaffold00073 854318 1 A C scaffold10534 ScafM SNP 0021.scaffold00073 854393 1 A T scaffold10534 ScafM INDEL 0021.scaffold00073 854428 3 ATT ... scaffold10534 ScafM INDEL 0021.scaffold00073 854433 1 C . scaffold10534 ScafM SNP 0021.scaffold00073 854506 1 A G scaffold10534 Both INDEL 0021.scaffold00073 955569 1 . T scaffold10129 ScafM INDEL 0021.scaffold00073 1002946 33 ................................. CCATTTCGAAATAATATCCCCCCCCCCCCCCCC scaffold23282 ScafM INDEL 0021.scaffold00073 1024897 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025010 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025047 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025068 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025096 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025106 1 . T scaffold10711 ScafM INDEL 0021.scaffold00073 1025113 1 . T scaffold10711 ScafM SNP 0021.scaffold00073 1029764 1 A G scaffold4022 ScafM SNP 0021.scaffold00073 1029779 1 G T scaffold4022 ScafM SNP 0021.scaffold00073 1029798 1 T C scaffold4022 ScafM INDEL 0021.scaffold00073 1029835 2 .. GT scaffold4022 ScafM SNP 0021.scaffold00073 1029836 1 C A scaffold4022 ScafM SNP 0021.scaffold00073 1029855 1 G C scaffold4022 ScafM SNP 0021.scaffold00073 1041967 1 T C scaffold3111 ScafM SNP 0021.scaffold00073 1041997 1 T A scaffold3111 ScafM SNP 0021.scaffold00073 1042003 1 A G scaffold3111 ScafM SNP 0021.scaffold00073 1042007 1 T C scaffold3111 ScafM SNP 0021.scaffold00073 1042051 1 A G scaffold3111 ScafM SNP 0021.scaffold00073 1042056 1 T G scaffold3111 ScafM SNP 0021.scaffold00073 1051291 1 A G scaffold3111 ScafM INDEL 0021.scaffold00073 1094954 2 .. TG scaffold7103 ScafM INDEL 0021.scaffold00073 1095019 1 . A scaffold7103 ScafM INDEL 0021.scaffold00073 1096630 1 . A scaffold35599 ScafM SNP 0021.scaffold00073 1104420 1 G C scaffold30979 ScafM SNP 0021.scaffold00073 1104424 1 C G scaffold30979 ScafM SNP 0021.scaffold00073 1104427 1 A G scaffold30979 ScafM SNP 0021.scaffold00073 1104442 1 T C scaffold30979 ScafM SNP 0021.scaffold00073 1104472 1 G A scaffold30979 ScafM SNP 0021.scaffold00073 1104477 2 TG CA scaffold30979 ScafM SNP 0021.scaffold00073 1104480 2 GT AC scaffold30979 ScafM INDEL 0021.scaffold00073 1104505 3 ... AAA scaffold30979 ScafM SNP 0021.scaffold00073 1104506 1 T A scaffold30979 ScafM SNP 0021.scaffold00073 1104510 1 C A scaffold30979 ScafM SNP 0021.scaffold00073 1104517 1 A T scaffold30979 ScafM SNP 0021.scaffold00073 1104538 1 C A scaffold30979 ScafM SNP 0021.scaffold00073 1104548 1 C A scaffold30979 ScafM SNP 0021.scaffold00073 1104556 1 G A scaffold30979 ReadM INDEL 0021.scaffold00073 1136862 1 T . - ScafM SNP 0021.scaffold00073 1189177 1 T A scaffold30803 ScafM SNP 0021.scaffold00073 1189186 1 A C scaffold30803 ScafM SNP 0021.scaffold00073 1189363 1 C T scaffold30803 ScafM SNP 0021.scaffold00073 1189383 1 G A scaffold30803 ScafM INDEL 0021.scaffold00073 1199700 1 . A scaffold16663 ReadM SNP 0021.scaffold00073 1214065 1 C T - ScafM SNP 0021.scaffold00073 1235977 1 T C scaffold37005 ScafM SNP 0021.scaffold00073 1236003 1 T A scaffold37005 ScafM SNP 0021.scaffold00073 1236006 1 T G scaffold37005 ScafM SNP 0021.scaffold00073 1236015 1 T C scaffold37005 ScafM SNP 0021.scaffold00073 1236037 1 T G scaffold37005 ScafM SNP 0021.scaffold00073 1236042 1 T G scaffold37005 ScafM SNP 0021.scaffold00073 1236046 1 T A scaffold37005 ScafM SNP 0021.scaffold00073 1236049 1 C T scaffold37005 ScafM SNP 0021.scaffold00073 1236086 1 G A scaffold37005 ScafM SNP 0021.scaffold00073 1258622 1 G T scaffold3914 ScafM SNP 0021.scaffold00073 1258624 1 G C scaffold3914 ScafM SNP 0021.scaffold00073 1258650 1 G A scaffold3914 ScafM SNP 0021.scaffold00073 1258661 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1258671 1 T A scaffold3914 ScafM SNP 0021.scaffold00073 1258745 1 C G scaffold3914 ScafM SNP 0021.scaffold00073 1258751 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1258758 1 A G scaffold3914 ScafM SNP 0021.scaffold00073 1258774 1 C A scaffold3914 ScafM SNP 0021.scaffold00073 1258826 1 A C scaffold3914 ScafM INDEL 0021.scaffold00073 1258878 1 . T scaffold3914 ScafM SNP 0021.scaffold00073 1258890 1 G A scaffold3914 ScafM SNP 0021.scaffold00073 1258901 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1258915 1 C T scaffold3914 ScafM SNP 0021.scaffold00073 1258933 1 A G scaffold3914 ScafM SNP 0021.scaffold00073 1258939 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1258943 1 G T scaffold3914 ScafM INDEL 0021.scaffold00073 1258953 1 . C scaffold3914 ScafM INDEL 0021.scaffold00073 1258956 1 . A scaffold3914 ScafM SNP 0021.scaffold00073 1258983 1 C T scaffold3914 ScafM SNP 0021.scaffold00073 1259015 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1259056 1 G A scaffold3914 ScafM INDEL 0021.scaffold00073 1259102 1 A . scaffold3914 ScafM INDEL 0021.scaffold00073 1259116 1 A . scaffold3914 ScafM SNP 0021.scaffold00073 1259151 1 C G scaffold3914 ScafM SNP 0021.scaffold00073 1259163 1 A G scaffold3914 ScafM SNP 0021.scaffold00073 1259172 1 C T scaffold3914 ScafM SNP 0021.scaffold00073 1259179 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1259195 1 G A scaffold3914 ScafM SNP 0021.scaffold00073 1259227 1 G T scaffold3914 ScafM SNP 0021.scaffold00073 1259231 1 A C scaffold3914 ScafM SNP 0021.scaffold00073 1259277 1 C T scaffold3914 ScafM SNP 0021.scaffold00073 1259295 1 T G scaffold3914 ScafM SNP 0021.scaffold00073 1259308 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1259319 1 C T scaffold3914 ScafM SNP 0021.scaffold00073 1259324 1 G A scaffold3914 ScafM SNP 0021.scaffold00073 1259327 1 A T scaffold3914 ScafM SNP 0021.scaffold00073 1259367 1 A G scaffold3914 ScafM SNP 0021.scaffold00073 1259375 1 C A scaffold3914 ScafM SNP 0021.scaffold00073 1259393 1 C G scaffold3914 ScafM SNP 0021.scaffold00073 1259417 1 A G scaffold3914 ScafM INDEL 0021.scaffold00073 1259431 1 C . scaffold3914 ScafM SNP 0021.scaffold00073 1259435 1 T A scaffold3914 ScafM SNP 0021.scaffold00073 1259439 2 TC AA scaffold3914 ScafM INDEL 0021.scaffold00073 1259444 1 . T scaffold3914 ScafM SNP 0021.scaffold00073 1259450 1 C T scaffold3914 ScafM INDEL 0021.scaffold00073 1259453 2 TT .A scaffold3914 ScafM SNP 0021.scaffold00073 1259490 1 T C scaffold3914 ScafM SNP 0021.scaffold00073 1270642 1 A C scaffold1957 ReadM SNP 0021.scaffold00073 1299127 1 C T - ReadM SNP 0021.scaffold00073 1299155 1 A C - ScafM SNP 0021.scaffold00073 1300756 1 A C scaffold1957 ScafM SNP 0021.scaffold00073 1311064 1 C T scaffold5666 ScafM SNP 0021.scaffold00073 1311102 1 A G scaffold5666 ScafM SNP 0021.scaffold00073 1311113 1 A C scaffold5666 ScafM SNP 0021.scaffold00073 1311115 1 G T scaffold5666 ScafM SNP 0021.scaffold00073 1311160 1 T C scaffold5666 ScafM SNP 0021.scaffold00073 1311203 1 T C scaffold5666 ScafM SNP 0021.scaffold00073 1311205 1 C T scaffold5666 ScafM INDEL 0021.scaffold00073 1311249 1 . A scaffold25171 ScafM INDEL 0021.scaffold00073 1401619 1 A . scaffold34152 ScafM INDEL 0021.scaffold00073 1410534 15 ............... GGGGGGGGGGGGGGG scaffold3938 ScafM SNP 0021.scaffold00073 1412798 1 G C scaffold7003 ScafM SNP 0021.scaffold00073 1412802 1 C T scaffold7003 ScafM SNP 0021.scaffold00073 1412830 1 C T scaffold7003 ScafM SNP 0021.scaffold00073 1412852 1 T C scaffold7003 ScafM INDEL 0021.scaffold00073 1412907 3 ... TTA scaffold7003 ScafM SNP 0021.scaffold00073 1412942 1 G T scaffold7003 ScafM SNP 0021.scaffold00073 1412966 1 T C scaffold7003 ScafM SNP 0021.scaffold00073 1412978 1 C T scaffold7003 ScafM INDEL 0021.scaffold00073 1497072 1 . T scaffold5056 ScafM SNP 0021.scaffold00073 1497076 1 G A scaffold5056 ScafM SNP 0021.scaffold00073 1553764 1 G A scaffold5056 ScafM INDEL 0021.scaffold00073 1573110 35 ................................... ACCAATTTTTCAGTTTTTCAACTTCATCAAAACTC scaffold13947 ScafM SNP 0021.scaffold00073 1574046 1 C T scaffold13947 ScafM SNP 0021.scaffold00073 1574097 1 A G scaffold13947 ScafM INDEL 0022.scaffold00080 3335 1 . G scaffold3862 ScafM SNP 0022.scaffold00080 13143 1 T G scaffold325 ScafM SNP 0022.scaffold00080 13253 1 C T scaffold325 ScafM SNP 0022.scaffold00080 13263 1 T A scaffold325 ScafM SNP 0022.scaffold00080 13269 1 T C scaffold325 ScafM SNP 0022.scaffold00080 13275 1 C T scaffold325 ScafM SNP 0022.scaffold00080 13311 1 C T scaffold325 ScafM SNP 0022.scaffold00080 13425 1 T C scaffold642 ScafM SNP 0022.scaffold00080 13436 2 TC CT scaffold642 ScafM INDEL 0022.scaffold00080 13495 2 .. GA scaffold642 ScafM SNP 0022.scaffold00080 13520 2 CG TA scaffold642 ScafM SNP 0022.scaffold00080 13534 1 A G scaffold642 ScafM SNP 0022.scaffold00080 13539 1 G T scaffold642 ScafM SNP 0022.scaffold00080 13549 2 AT TC scaffold642 ScafM SNP 0022.scaffold00080 13612 1 C T scaffold642 ScafM SNP 0022.scaffold00080 13618 1 C T scaffold642 ScafM INDEL 0022.scaffold00080 13627 1 . A scaffold642 ScafM SNP 0022.scaffold00080 13631 1 A T scaffold642 ScafM SNP 0022.scaffold00080 13642 2 CA TG scaffold642 ScafM SNP 0022.scaffold00080 13646 1 T C scaffold642 ScafM INDEL 0022.scaffold00080 74101 1 . T scaffold15907 ScafM INDEL 0022.scaffold00080 74438 13 ............. CCCTTTGGTAATT scaffold15907 ScafM SNP 0022.scaffold00080 74584 1 G T scaffold15907 ReadM SNP 0022.scaffold00080 91960 1 T C - ReadM SNP 0023.scaffold00091 519 1 G A - ScafM SNP 0023.scaffold00091 2384 2 CA GG scaffold7508 Both SNP 0023.scaffold00091 53439 1 C T scaffold9108 ScafM SNP 0023.scaffold00091 67742 1 A C scaffold9108 ScafM SNP 0023.scaffold00091 70918 1 T A scaffold9108 ScafM SNP 0023.scaffold00091 70920 1 G T scaffold9108 ScafM SNP 0023.scaffold00091 70946 2 GA TG scaffold9108 ScafM SNP 0023.scaffold00091 70955 1 A G scaffold9108 ScafM SNP 0023.scaffold00091 70962 1 G A scaffold9108 ScafM SNP 0023.scaffold00091 70968 1 A T scaffold9108 ScafM SNP 0023.scaffold00091 70971 2 TG GA scaffold9108 ScafM SNP 0023.scaffold00091 70991 1 T C scaffold9108 ScafM SNP 0023.scaffold00091 70995 1 T G scaffold9108 ScafM SNP 0023.scaffold00091 70998 1 A G scaffold9108 ScafM SNP 0023.scaffold00091 74810 1 G A scaffold9108 ScafM INDEL 0023.scaffold00091 108530 4 TTGA .... scaffold2395 ScafM INDEL 0023.scaffold00091 139375 36 .................................... AGTCATCCTATCAAACCCAATCTTCAACCTCTCCAA scaffold25042 ScafM SNP 0023.scaffold00091 139813 1 C A scaffold25042 ScafM SNP 0023.scaffold00091 139820 1 T C scaffold25042 ScafM INDEL 0023.scaffold00091 139876 9 ATTCAAGCA ......... scaffold25042 ScafM SNP 0023.scaffold00091 139904 1 T A scaffold25042 ScafM SNP 0023.scaffold00091 139921 1 C A scaffold25042 ScafM SNP 0023.scaffold00091 139962 1 T A scaffold25042 ScafM INDEL 0023.scaffold00091 139964 1 T . scaffold25042 ScafM INDEL 0023.scaffold00091 139966 2 TG .. scaffold25042 ScafM INDEL 0023.scaffold00091 139970 1 A . scaffold25042 ScafM SNP 0023.scaffold00091 139974 2 AC CT scaffold25042 ScafM SNP 0023.scaffold00091 139977 2 AA GT scaffold25042 ScafM INDEL 0023.scaffold00091 139982 1 A . scaffold25042 ScafM SNP 0023.scaffold00091 139986 1 A C scaffold25042 ScafM SNP 0023.scaffold00091 139989 1 G A scaffold25042 ScafM INDEL 0023.scaffold00091 139991 1 . A scaffold25042 ScafM SNP 0023.scaffold00091 140606 1 C T scaffold25042 ScafM SNP 0023.scaffold00091 160586 1 T C scaffold3312 ScafM SNP 0023.scaffold00091 223993 1 T C scaffold22178 ScafM SNP 0023.scaffold00091 224002 1 T C scaffold22178 ScafM SNP 0023.scaffold00091 224016 2 AT TG scaffold22178 ScafM SNP 0023.scaffold00091 224025 1 G T scaffold22178 ScafM SNP 0023.scaffold00091 224048 1 T G scaffold22178 ScafM SNP 0023.scaffold00091 224056 1 G T scaffold22178 ScafM SNP 0023.scaffold00091 224087 1 T A scaffold22178 ScafM INDEL 0023.scaffold00091 224098 1 A . scaffold22178 ScafM SNP 0023.scaffold00091 224100 1 T A scaffold22178 ScafM INDEL 0023.scaffold00091 224108 1 . G scaffold22178 ScafM SNP 0023.scaffold00091 229505 1 C G scaffold11356 ScafM SNP 0023.scaffold00091 283499 1 C A scaffold24959 ScafM INDEL 0023.scaffold00091 283509 1 T . scaffold24959 ScafM SNP 0023.scaffold00091 283556 1 C A scaffold24959 ScafM SNP 0023.scaffold00091 283595 1 A G scaffold24959 ScafM SNP 0023.scaffold00091 283599 1 A G scaffold24959 ScafM SNP 0023.scaffold00091 283661 1 T G scaffold24959 ScafM SNP 0023.scaffold00091 283663 1 G A scaffold24959 ScafM SNP 0023.scaffold00091 283746 1 T C scaffold24959 ScafM SNP 0023.scaffold00091 283751 1 A G scaffold24959 ScafM SNP 0023.scaffold00091 283797 1 C T scaffold24959 ScafM SNP 0023.scaffold00091 283836 1 C T scaffold24959 ScafM SNP 0023.scaffold00091 283884 1 A G scaffold24959 ScafM SNP 0023.scaffold00091 283894 1 G A scaffold24959 ScafM SNP 0023.scaffold00091 283899 1 A G scaffold24959 ScafM SNP 0023.scaffold00091 283922 1 G A scaffold24959 ReadM INDEL 0023.scaffold00091 302769 3 ... GAA - ReadM SNP 0023.scaffold00091 306515 1 C G - Both INDEL 0023.scaffold00091 310938 1 T . scaffold6651 ScafM INDEL 0023.scaffold00091 329905 1 T . scaffold6651 ScafM INDEL 0023.scaffold00091 329912 1 T . scaffold6651 ScafM INDEL 0023.scaffold00091 332416 2 .. AA scaffold6651 ScafM INDEL 0023.scaffold00091 337749 8 ........ CAAAAAAC scaffold6651 Both INDEL 0023.scaffold00091 339264 1 . T scaffold6651 ScafM INDEL 0023.scaffold00091 437423 1 . A scaffold1724 ScafM SNP 0023.scaffold00091 454007 1 C T scaffold1724 ScafM INDEL 0023.scaffold00091 456842 1 . G scaffold1724 ScafM SNP 0023.scaffold00091 462137 2 AT TA scaffold1724 ScafM INDEL 0023.scaffold00091 462361 1 . A C13423101 ScafM INDEL 0023.scaffold00091 465746 22 TTCATCTCTCTCACTCAAACAC ...................... scaffold1724 ScafM SNP 0023.scaffold00091 465889 1 T C scaffold1724 ScafM SNP 0023.scaffold00091 483423 1 A T scaffold1724 ScafM SNP 0023.scaffold00091 483431 1 C T scaffold1724 ScafM INDEL 0023.scaffold00091 526474 22 CGTCAATGATGTACATTGAAGC ...................... scaffold4781 ScafM SNP 0023.scaffold00091 527304 1 C T scaffold4781 ScafM INDEL 0023.scaffold00091 538369 2 .. AT scaffold4781 ScafM INDEL 0023.scaffold00091 542105 1 . T scaffold4781 ScafM INDEL 0023.scaffold00091 543836 47 CCGGCGGTATGCCTGGCCTACAGATATGAATGCTTCCCTTCGCCAAA ............................................... scaffold4781 ScafM INDEL 0023.scaffold00091 544730 8 ........ TGTTTTTT scaffold4781 ScafM SNP 0023.scaffold00091 544733 1 G T scaffold4781 ScafM INDEL 0023.scaffold00091 568662 1 T . scaffold8679 ScafM SNP 0023.scaffold00091 568664 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 568798 1 A G scaffold8679 ScafM SNP 0023.scaffold00091 570347 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 570371 1 C T scaffold8679 ScafM SNP 0023.scaffold00091 570426 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 570954 1 C A scaffold8679 ScafM SNP 0023.scaffold00091 570970 1 A T scaffold8679 ScafM SNP 0023.scaffold00091 573588 1 C T scaffold8679 ScafM SNP 0023.scaffold00091 573629 1 A G scaffold8679 ScafM SNP 0023.scaffold00091 578580 1 C A scaffold8679 ScafM SNP 0023.scaffold00091 578777 1 C T scaffold8679 ScafM INDEL 0023.scaffold00091 578781 2 .T GC scaffold8679 ScafM SNP 0023.scaffold00091 578785 1 A T scaffold8679 ScafM INDEL 0023.scaffold00091 578786 1 . A scaffold8679 ScafM INDEL 0023.scaffold00091 578787 1 . T scaffold8679 ScafM SNP 0023.scaffold00091 578789 1 G A scaffold8679 ScafM SNP 0023.scaffold00091 578792 1 C T scaffold8679 ScafM INDEL 0023.scaffold00091 578794 2 AG .T scaffold8679 ScafM SNP 0023.scaffold00091 578797 1 A C scaffold8679 ScafM INDEL 0023.scaffold00091 578800 4 GTTT .ACC scaffold8679 ScafM SNP 0023.scaffold00091 578806 1 A T scaffold8679 ScafM SNP 0023.scaffold00091 578808 1 A T scaffold8679 ScafM INDEL 0023.scaffold00091 578810 3 GTG ..C scaffold8679 ScafM SNP 0023.scaffold00091 578815 1 A T scaffold8679 ScafM SNP 0023.scaffold00091 578818 1 G A scaffold8679 ScafM INDEL 0023.scaffold00091 578819 1 . A scaffold8679 ScafM SNP 0023.scaffold00091 578821 1 C G scaffold8679 ScafM SNP 0023.scaffold00091 578823 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 578825 2 GT TC scaffold8679 ScafM SNP 0023.scaffold00091 578828 2 AA TT scaffold8679 ScafM INDEL 0023.scaffold00091 579353 1 . A scaffold8679 ScafM SNP 0023.scaffold00091 581933 1 T G scaffold8679 ScafM SNP 0023.scaffold00091 583218 1 C T scaffold8679 ScafM SNP 0023.scaffold00091 584520 1 A C scaffold8679 ScafM SNP 0023.scaffold00091 584539 1 C T scaffold8679 ScafM SNP 0023.scaffold00091 584578 1 A G scaffold8679 ScafM SNP 0023.scaffold00091 584584 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 584596 1 G A scaffold8679 Both INDEL 0023.scaffold00091 585085 1 . T scaffold8679 ScafM SNP 0023.scaffold00091 587096 1 T G scaffold8679 ScafM SNP 0023.scaffold00091 587139 1 C T scaffold8679 ScafM SNP 0023.scaffold00091 590699 1 G T scaffold8679 ScafM SNP 0023.scaffold00091 590707 1 T C scaffold8679 ScafM SNP 0023.scaffold00091 600952 1 A C scaffold8679 ScafM SNP 0023.scaffold00091 608608 1 A T scaffold24241 ScafM SNP 0023.scaffold00091 609096 1 T C scaffold24241 ScafM SNP 0023.scaffold00091 609178 2 TC AT scaffold24241 ScafM SNP 0023.scaffold00091 609191 1 C G scaffold24241 ScafM INDEL 0023.scaffold00091 609204 12 ACAAATTTTCAA ............ scaffold24241 ScafM SNP 0023.scaffold00091 609244 1 G A scaffold24241 ScafM INDEL 0023.scaffold00091 609251 1 A . scaffold24241 ScafM SNP 0023.scaffold00091 609260 2 AT TC scaffold24241 ScafM SNP 0023.scaffold00091 609330 1 T C scaffold24241 ScafM INDEL 0023.scaffold00091 609384 2 AA .. scaffold24241 ScafM SNP 0023.scaffold00091 609417 1 C A scaffold24241 ScafM INDEL 0023.scaffold00091 620134 1 . T scaffold15601 ScafM INDEL 0023.scaffold00091 623480 1 . A scaffold15601 ScafM INDEL 0023.scaffold00091 640410 7 ....... CTTTGAC scaffold22885 ScafM SNP 0023.scaffold00091 640419 1 T G scaffold22885 ScafM SNP 0023.scaffold00091 640428 1 A C scaffold22885 ScafM SNP 0023.scaffold00091 649218 1 T C scaffold22885 ScafM SNP 0023.scaffold00091 649512 1 G A scaffold22885 ScafM SNP 0023.scaffold00091 649542 1 G A scaffold22885 ScafM SNP 0023.scaffold00091 649623 1 T C scaffold22885 ScafM SNP 0023.scaffold00091 649686 1 T C scaffold22885 ScafM SNP 0023.scaffold00091 649836 1 A G scaffold22885 ScafM SNP 0023.scaffold00091 649899 1 G A scaffold22885 ScafM SNP 0023.scaffold00091 650013 1 T C scaffold22885 ScafM SNP 0023.scaffold00091 650037 1 C A scaffold22885 ScafM SNP 0023.scaffold00091 652358 1 C T scaffold22885 ReadM INDEL 0023.scaffold00091 661686 1 . T - ScafM SNP 0023.scaffold00091 673321 1 A G scaffold8749 ReadM SNP 0023.scaffold00091 679098 1 C A - ScafM INDEL 0023.scaffold00091 680292 20 .................... GTGGGGGAGGGGGTTGTGGT scaffold8749 ReadM INDEL 0023.scaffold00091 696808 1 . A - ScafM SNP 0023.scaffold00091 705411 1 T C scaffold8749 ScafM SNP 0023.scaffold00091 707107 1 C T scaffold8749 ScafM SNP 0023.scaffold00091 707814 1 T G scaffold9565 ScafM SNP 0023.scaffold00091 707830 1 A G scaffold9565 ScafM INDEL 0023.scaffold00091 707848 7 ....... TCTAAGC scaffold9565 ScafM INDEL 0023.scaffold00091 707849 7 ....... TTAATAA scaffold9565 ScafM SNP 0023.scaffold00091 707866 1 T C scaffold9565 ScafM SNP 0023.scaffold00091 707895 1 A C scaffold9565 ScafM SNP 0023.scaffold00091 707897 1 T C scaffold9565 ScafM SNP 0023.scaffold00091 707962 2 CA TG scaffold9565 ScafM SNP 0023.scaffold00091 708028 1 A T scaffold9565 ScafM SNP 0023.scaffold00091 708051 1 C T scaffold9565 ScafM SNP 0023.scaffold00091 708105 1 T C scaffold9565 ScafM SNP 0023.scaffold00091 708120 1 A C scaffold9565 ScafM SNP 0023.scaffold00091 708153 1 A C scaffold9565 ScafM SNP 0023.scaffold00091 708181 1 A G scaffold9565 ScafM SNP 0023.scaffold00091 708215 1 A G scaffold9565 ScafM SNP 0023.scaffold00091 708227 1 G A scaffold9565 ScafM SNP 0023.scaffold00091 708230 1 A T scaffold9565 ScafM SNP 0023.scaffold00091 708278 1 G A scaffold9565 ScafM SNP 0023.scaffold00091 708338 1 G A scaffold9565 ScafM SNP 0023.scaffold00091 708398 1 A C scaffold9565 ScafM SNP 0023.scaffold00091 708528 1 G A scaffold9565 ScafM SNP 0023.scaffold00091 708545 1 G A scaffold9565 ScafM SNP 0023.scaffold00091 708732 1 T A scaffold8749 ScafM SNP 0023.scaffold00091 708791 1 A G scaffold8749 ScafM SNP 0023.scaffold00091 708817 1 C T scaffold8749 ScafM INDEL 0023.scaffold00091 712982 1 . C scaffold5855 ScafM INDEL 0023.scaffold00091 713185 1 T . scaffold5855 ScafM SNP 0023.scaffold00091 713212 1 G C scaffold5855 ScafM SNP 0023.scaffold00091 713457 1 G T scaffold5855 ScafM SNP 0023.scaffold00091 713470 1 G T scaffold5855 ScafM SNP 0023.scaffold00091 713493 1 A T scaffold5855 ScafM INDEL 0023.scaffold00091 713501 1 T . scaffold5855 ScafM INDEL 0023.scaffold00091 730401 1 . T scaffold13954 Both SNP 0023.scaffold00091 798970 1 T C scaffold8956 ScafM SNP 0023.scaffold00091 839474 1 A G scaffold8956 ScafM SNP 0023.scaffold00091 854719 1 T A scaffold23480 ReadM INDEL 0024.scaffold00093 8867 2 AG .. - Both SNP 0024.scaffold00093 9748 1 A G scaffold16289 ScafM INDEL 0024.scaffold00093 28199 1 G . scaffold16469 ReadM INDEL 0024.scaffold00093 36217 1 T . - ScafM SNP 0024.scaffold00093 36753 1 T C scaffold16469 ScafM SNP 0024.scaffold00093 36841 1 A G scaffold16469 ScafM INDEL 0024.scaffold00093 46834 7 AAAATCA ....... scaffold33909 ScafM INDEL 0024.scaffold00093 46866 4 TGTG .... scaffold33909 ScafM SNP 0024.scaffold00093 46872 1 G T scaffold33909 ScafM SNP 0024.scaffold00093 46876 1 G T scaffold33909 ScafM SNP 0024.scaffold00093 59325 1 C T scaffold33909 ScafM INDEL 0024.scaffold00093 60023 1 . T scaffold33909 ScafM SNP 0024.scaffold00093 60038 1 G C scaffold33909 ScafM INDEL 0024.scaffold00093 60109 2 .. AA scaffold33909 ScafM SNP 0024.scaffold00093 60119 1 G A scaffold33909 ScafM SNP 0024.scaffold00093 60126 1 A G scaffold33909 ScafM SNP 0024.scaffold00093 60141 1 G A scaffold33909 ScafM SNP 0024.scaffold00093 60149 1 A T scaffold33909 ScafM SNP 0024.scaffold00093 60159 1 A G scaffold33909 ScafM SNP 0024.scaffold00093 60168 1 T A scaffold33909 ScafM SNP 0024.scaffold00093 60189 1 G A scaffold33909 ScafM INDEL 0024.scaffold00093 60192 1 . T scaffold33909 ScafM INDEL 0024.scaffold00093 79796 1 . T scaffold35853 ReadM INDEL 0024.scaffold00093 89612 1 T . - ReadM SNP 0024.scaffold00093 93024 1 C T - ScafM INDEL 0024.scaffold00093 120681 1 . T scaffold8007 ScafM SNP 0024.scaffold00093 121489 1 A C scaffold8007 ScafM SNP 0024.scaffold00093 121569 1 A G scaffold8007 ScafM SNP 0024.scaffold00093 121665 1 T C scaffold8007 ScafM SNP 0024.scaffold00093 121704 1 G A scaffold8007 ScafM SNP 0024.scaffold00093 121738 1 G C scaffold8007 ScafM SNP 0024.scaffold00093 121747 1 G T scaffold8007 ScafM SNP 0024.scaffold00093 121770 1 A C scaffold8007 ScafM SNP 0024.scaffold00093 121840 1 A G scaffold8007 ScafM SNP 0024.scaffold00093 125377 1 G T scaffold8007 ScafM INDEL 0024.scaffold00093 125380 1 A . scaffold8007 Both INDEL 0024.scaffold00093 129064 1 . A scaffold8007 Both SNP 0024.scaffold00093 129261 1 T C scaffold8007 ReadM SNP 0024.scaffold00093 149619 1 T C - ReadM SNP 0024.scaffold00093 151190 1 A C - ReadM SNP 0024.scaffold00093 156725 1 A C - ScafM SNP 0024.scaffold00093 176448 1 T C scaffold6975 ScafM INDEL 0024.scaffold00093 183672 3 GGG ... scaffold6975 ScafM INDEL 0024.scaffold00093 192373 17 ................. GCGGGGGTTGAAGGGGG scaffold6975 ScafM INDEL 0024.scaffold00093 195071 1 . T scaffold6975 Both SNP 0024.scaffold00093 197401 1 A C scaffold6975 ScafM SNP 0024.scaffold00093 199394 1 C T scaffold25987 ScafM SNP 0024.scaffold00093 215568 1 G T scaffold6975 ReadM SNP 0024.scaffold00093 221544 1 T C - ScafM INDEL 0024.scaffold00093 232546 1 . T scaffold7948 ScafM SNP 0024.scaffold00093 232841 2 TA CG scaffold7948 ReadM SNP 0024.scaffold00093 243122 1 T C - Both SNP 0024.scaffold00093 247063 1 G A scaffold7948 ScafM SNP 0024.scaffold00093 247249 1 A C scaffold7948 ScafM SNP 0024.scaffold00093 247894 1 C G scaffold7948 ScafM SNP 0024.scaffold00093 247903 1 T C scaffold7948 ScafM SNP 0024.scaffold00093 247912 1 A C scaffold7948 ScafM SNP 0024.scaffold00093 247961 1 A G scaffold7948 ScafM INDEL 0024.scaffold00093 247982 1 . A scaffold7948 ScafM SNP 0024.scaffold00093 247988 1 G C scaffold7948 ScafM SNP 0024.scaffold00093 248038 1 A T scaffold7948 ScafM SNP 0024.scaffold00093 248092 1 T A scaffold7948 ScafM SNP 0024.scaffold00093 248104 1 C G scaffold7948 ScafM SNP 0024.scaffold00093 248121 1 G A scaffold7948 ScafM SNP 0024.scaffold00093 248173 1 A G scaffold7948 ScafM SNP 0024.scaffold00093 248232 1 T G scaffold7948 ScafM INDEL 0024.scaffold00093 248234 2 .. TT scaffold7948 ScafM SNP 0024.scaffold00093 248235 1 C T scaffold7948 ScafM SNP 0024.scaffold00093 248251 1 T A scaffold7948 ScafM SNP 0024.scaffold00093 248255 1 C G scaffold7948 ScafM SNP 0024.scaffold00093 248297 1 T C scaffold7948 ScafM SNP 0024.scaffold00093 248358 1 T C scaffold7948 ScafM SNP 0024.scaffold00093 248405 1 T C scaffold7948 Both SNP 0024.scaffold00093 248664 1 C T scaffold7948 ScafM SNP 0024.scaffold00093 248867 1 A C scaffold7948 ScafM INDEL 0024.scaffold00093 249291 41 ......................................... GAAGAGTGAGGCTGATCCATAACATCAACTGCAGAAGAATG scaffold7948 ScafM SNP 0024.scaffold00093 250766 1 A C scaffold7948 ScafM INDEL 0024.scaffold00093 250799 2 .. AA scaffold7948 ScafM SNP 0024.scaffold00093 250800 1 G A scaffold7948 ScafM SNP 0024.scaffold00093 250803 1 A G scaffold7948 ScafM SNP 0024.scaffold00093 250806 3 TTC GAA scaffold7948 ScafM SNP 0024.scaffold00093 250810 2 TT CG scaffold7948 ScafM INDEL 0024.scaffold00093 250812 3 ... AAA scaffold7948 ScafM SNP 0024.scaffold00093 250813 3 CCT AGA scaffold7948 ScafM SNP 0024.scaffold00093 250818 2 GC CT scaffold7948 ScafM SNP 0024.scaffold00093 250823 1 C G scaffold7948 ScafM SNP 0024.scaffold00093 250825 1 G A scaffold7948 ScafM INDEL 0024.scaffold00093 250826 1 . T scaffold7948 ScafM SNP 0024.scaffold00093 250829 2 TT AA scaffold7948 ScafM SNP 0024.scaffold00093 250832 3 CCG GAA scaffold7948 ScafM INDEL 0024.scaffold00093 250836 1 . A scaffold7948 ScafM INDEL 0024.scaffold00093 250838 2 .G CT scaffold7948 ScafM SNP 0024.scaffold00093 250841 1 A T scaffold7948 ScafM SNP 0024.scaffold00093 250843 4 GGCT AAAA scaffold7948 ScafM SNP 0024.scaffold00093 250848 1 G A scaffold7948 ScafM SNP 0024.scaffold00093 250851 1 T C scaffold7948 ScafM INDEL 0024.scaffold00093 250855 5 ..... TTCTT scaffold7948 ScafM INDEL 0024.scaffold00093 250858 4 .... CTGG scaffold7948 ScafM INDEL 0024.scaffold00093 250859 6 ...... AATCAA scaffold7948 ScafM SNP 0024.scaffold00093 250882 1 C T scaffold7948 ScafM INDEL 0024.scaffold00093 250914 1 . A scaffold7948 ScafM SNP 0024.scaffold00093 251080 1 T C scaffold7948 ScafM SNP 0024.scaffold00093 261702 1 C T scaffold7948 ScafM SNP 0024.scaffold00093 261711 1 C T scaffold7948 ReadM INDEL 0024.scaffold00093 262257 1 . A - ReadM SNP 0024.scaffold00093 268415 1 A G - ScafM INDEL 0024.scaffold00093 279021 2 GC .. scaffold14001 ScafM SNP 0024.scaffold00093 279036 1 G A scaffold14001 ScafM INDEL 0024.scaffold00093 281647 1 . A scaffold14001 ScafM INDEL 0024.scaffold00093 283158 15 ............... GGGGGGGGGGGGGGG scaffold14001 ScafM INDEL 0024.scaffold00093 284033 19 TATTGTGTAAATTATTTTT ................... scaffold14001 ScafM INDEL 0024.scaffold00093 284053 8 TTTTATGT ........ scaffold14001 ScafM INDEL 0024.scaffold00093 284066 3 ATT ... scaffold14001 ScafM INDEL 0024.scaffold00093 288868 2 AA .. scaffold14001 ReadM SNP 0024.scaffold00093 290242 1 G A - ReadM INDEL 0024.scaffold00093 292745 2 AA .. - Both SNP 0024.scaffold00093 293175 1 T G scaffold14001 ScafM INDEL 0024.scaffold00093 294266 15 ............... GAAAAACAAAATTGT scaffold14001 ScafM SNP 0024.scaffold00093 307221 1 C T scaffold5353 ScafM SNP 0024.scaffold00093 307274 1 T C scaffold5353 ScafM INDEL 0024.scaffold00093 307295 3 CTA ... scaffold5353 ScafM SNP 0024.scaffold00093 307382 1 G A scaffold5353 ScafM SNP 0024.scaffold00093 307384 1 T C scaffold5353 ScafM SNP 0024.scaffold00093 307457 1 C T scaffold5353 ScafM SNP 0024.scaffold00093 307660 1 A G scaffold5353 ScafM SNP 0024.scaffold00093 318760 1 C T scaffold5353 ScafM SNP 0024.scaffold00093 318779 1 G A scaffold5353 ScafM SNP 0024.scaffold00093 318784 1 A G scaffold5353 ScafM SNP 0024.scaffold00093 318908 2 CG TA scaffold5353 ScafM SNP 0024.scaffold00093 318946 1 G A scaffold5353 ScafM SNP 0024.scaffold00093 318966 1 C T scaffold5353 ScafM SNP 0024.scaffold00093 318968 1 G A scaffold5353 ScafM INDEL 0024.scaffold00093 318990 12 ............ ACACTGGAGGCC scaffold5353 ScafM INDEL 0024.scaffold00093 318992 1 . A scaffold5353 ScafM INDEL 0024.scaffold00093 318996 3 ... GAC scaffold5353 ScafM INDEL 0024.scaffold00093 318997 1 . G scaffold5353 ScafM INDEL 0024.scaffold00093 318998 3 ... GCT scaffold5353 ScafM SNP 0024.scaffold00093 319004 1 A G scaffold5353 ScafM SNP 0024.scaffold00093 319029 1 G C scaffold5353 ScafM SNP 0024.scaffold00093 319067 2 AC TT scaffold5353 ScafM SNP 0024.scaffold00093 319090 1 A G scaffold5353 ScafM SNP 0024.scaffold00093 319150 1 G A scaffold5353 ScafM SNP 0024.scaffold00093 319156 1 C G scaffold5353 ScafM SNP 0024.scaffold00093 319164 2 TG CA scaffold5353 ScafM SNP 0024.scaffold00093 319174 2 TT AA scaffold5353 ScafM SNP 0024.scaffold00093 319179 1 T A scaffold5353 ScafM SNP 0024.scaffold00093 320394 1 T C scaffold5353 ScafM SNP 0024.scaffold00093 320396 1 A C scaffold5353 ScafM INDEL 0024.scaffold00093 326365 2 .. AA scaffold5353 ReadM INDEL 0024.scaffold00093 355800 1 G . - Both SNP 0024.scaffold00093 364415 1 C T scaffold1322 Both SNP 0024.scaffold00093 367798 1 A G scaffold1322 Both SNP 0024.scaffold00093 368371 1 A G scaffold1322 Both SNP 0024.scaffold00093 372476 1 T A scaffold1322 ScafM INDEL 0024.scaffold00093 420912 11 TTTTTCAGATC ........... scaffold31598 ScafM SNP 0024.scaffold00093 429849 1 T C scaffold28844 ScafM SNP 0024.scaffold00093 429929 1 T C scaffold28844 ScafM SNP 0024.scaffold00093 429963 1 A G scaffold28844 ScafM SNP 0024.scaffold00093 429995 1 C T scaffold28844 ScafM SNP 0024.scaffold00093 430014 1 C T scaffold28844 ScafM INDEL 0024.scaffold00093 430020 1 G . scaffold28844 ScafM SNP 0024.scaffold00093 430864 1 T A scaffold31598 ReadM SNP 0024.scaffold00093 438924 1 T G - ScafM INDEL 0024.scaffold00093 442607 1 . G scaffold31598 ScafM SNP 0024.scaffold00093 454481 1 C G scaffold31598 ScafM INDEL 0024.scaffold00093 454562 1 T . scaffold31598 ScafM SNP 0024.scaffold00093 454593 1 A G scaffold31598 ScafM SNP 0024.scaffold00093 454718 1 T C scaffold31598 ScafM SNP 0024.scaffold00093 454939 1 G T scaffold31598 ScafM SNP 0024.scaffold00093 455001 1 T C scaffold31598 ScafM SNP 0024.scaffold00093 492890 1 A G scaffold11925 ScafM SNP 0024.scaffold00093 496207 1 C A scaffold6515 ScafM INDEL 0024.scaffold00093 497921 3 ..T CCC scaffold15294 ScafM SNP 0024.scaffold00093 526326 1 A T scaffold15627 ScafM INDEL 0024.scaffold00093 526384 3 ... TCT scaffold15627 ScafM INDEL 0024.scaffold00093 526411 1 . A scaffold15627 ScafM SNP 0024.scaffold00093 526460 1 G A scaffold15627 ScafM SNP 0024.scaffold00093 526495 1 G A scaffold15627 ScafM SNP 0024.scaffold00093 534230 1 T A scaffold38117 ScafM SNP 0024.scaffold00093 534670 1 T C scaffold2454 ScafM SNP 0024.scaffold00093 534678 1 T G scaffold2454 ScafM SNP 0024.scaffold00093 534701 1 G A scaffold2454 ScafM SNP 0024.scaffold00093 534721 2 AT GC scaffold2454 ScafM SNP 0024.scaffold00093 538456 1 T C scaffold16826 ScafM SNP 0024.scaffold00093 538460 1 T C scaffold16826 ScafM SNP 0024.scaffold00093 538463 1 T A scaffold16826 ScafM SNP 0024.scaffold00093 538468 1 T G scaffold16826 ScafM SNP 0024.scaffold00093 538473 1 A T scaffold16826 ScafM SNP 0024.scaffold00093 538480 1 T G scaffold16826 ScafM SNP 0024.scaffold00093 538485 1 A G scaffold16826 ScafM SNP 0024.scaffold00093 538490 1 A G scaffold16826 ScafM SNP 0024.scaffold00093 538507 1 C A scaffold16826 ScafM SNP 0024.scaffold00093 538521 1 C T scaffold16826 ScafM SNP 0024.scaffold00093 538535 1 G A scaffold16826 ScafM SNP 0024.scaffold00093 538540 1 T A scaffold16826 ScafM SNP 0024.scaffold00093 538543 1 A G scaffold16826 ScafM SNP 0024.scaffold00093 538550 1 G A scaffold16826 ScafM SNP 0024.scaffold00093 538601 1 T G scaffold16826 ScafM SNP 0024.scaffold00093 538618 1 C A scaffold16826 ScafM INDEL 0024.scaffold00093 538619 1 . T scaffold16826 ScafM SNP 0024.scaffold00093 538638 1 G A scaffold16826 ScafM SNP 0024.scaffold00093 538657 1 A C scaffold16826 ScafM SNP 0024.scaffold00093 538661 1 C T scaffold16826 ScafM SNP 0024.scaffold00093 538673 1 C T scaffold16826 ScafM SNP 0024.scaffold00093 538679 1 A G scaffold16826 ScafM SNP 0024.scaffold00093 538684 1 A G scaffold16826 ScafM SNP 0024.scaffold00093 540223 1 T C scaffold5342 ScafM SNP 0024.scaffold00093 576182 1 T C scaffold7679 ScafM SNP 0024.scaffold00093 576184 1 A G scaffold7679 ScafM INDEL 0024.scaffold00093 589794 1 . C scaffold7679 Both SNP 0024.scaffold00093 600248 1 T C scaffold7679 Both INDEL 0024.scaffold00093 600333 1 . T scaffold7679 ScafM INDEL 0024.scaffold00093 600597 1 . T scaffold7679 ScafM INDEL 0024.scaffold00093 606449 2 .. AA scaffold7679 ScafM SNP 0024.scaffold00093 609503 1 A T scaffold7679 ScafM SNP 0024.scaffold00093 666785 1 G T scaffold2755 ScafM SNP 0024.scaffold00093 666789 1 A T scaffold2755 ScafM SNP 0024.scaffold00093 666804 1 T C scaffold2755 ReadM INDEL 0024.scaffold00093 673393 1 . T - ScafM SNP 0024.scaffold00093 675062 1 G A scaffold2755 Both SNP 0024.scaffold00093 678124 2 GG AA scaffold2755 Both INDEL 0024.scaffold00093 678972 1 A . scaffold2755 ScafM SNP 0024.scaffold00093 679187 1 A G scaffold2755 Both INDEL 0024.scaffold00093 680709 1 . T scaffold2755 ScafM SNP 0024.scaffold00093 692416 1 A C scaffold2755 ScafM SNP 0024.scaffold00093 692536 1 T G scaffold2755 ScafM SNP 0024.scaffold00093 692608 1 T C scaffold2755 ScafM INDEL 0024.scaffold00093 692966 1 . T scaffold2755 ScafM SNP 0024.scaffold00093 692987 1 G A scaffold2755 ScafM SNP 0024.scaffold00093 693034 1 T G scaffold2755 ScafM SNP 0024.scaffold00093 693039 1 T C scaffold2755 ScafM SNP 0024.scaffold00093 693058 1 A G scaffold2755 ScafM SNP 0024.scaffold00093 693074 1 C A scaffold2755 ScafM SNP 0024.scaffold00093 693079 1 T A scaffold2755 ScafM INDEL 0024.scaffold00093 693081 5 ..... TTGCC scaffold2755 ScafM INDEL 0024.scaffold00093 693082 2 .. TT scaffold2755 ScafM SNP 0024.scaffold00093 693139 1 T A scaffold2755 Both SNP 0024.scaffold00093 707065 1 A G scaffold5647 ReadM SNP 0025.scaffold00096 550 1 A G - ReadM SNP 0025.scaffold00096 692 1 T A - Both SNP 0025.scaffold00096 1013 1 T C scaffold28379 ScafM INDEL 0025.scaffold00096 1065 39 ....................................... GCCCCTCCCCTCCCCCCCCCTGCCAGACCCTTTCCCATT scaffold28379 Both INDEL 0025.scaffold00096 1157 1 . C scaffold28379 Both SNP 0025.scaffold00096 1191 1 T C scaffold28379 Both INDEL 0025.scaffold00096 1247 1 . C scaffold28379 Both SNP 0025.scaffold00096 1341 1 C G scaffold28379 ReadM SNP 0025.scaffold00096 1442 1 C T - ReadM SNP 0025.scaffold00096 1466 1 C T - ReadM SNP 0025.scaffold00096 1521 1 T G - Both SNP 0025.scaffold00096 1589 1 C T scaffold28379 ScafM SNP 0025.scaffold00096 1628 1 T G scaffold28379 ScafM SNP 0025.scaffold00096 1631 1 T G scaffold28379 ReadM SNP 0025.scaffold00096 2034 1 T A - ReadM SNP 0025.scaffold00096 2042 1 A G - ReadM INDEL 0025.scaffold00096 2407 1 C . - ReadM SNP 0025.scaffold00096 2573 1 G T - ReadM SNP 0025.scaffold00096 2577 1 C G - Both SNP 0025.scaffold00096 2676 1 T C scaffold28379 Both SNP 0025.scaffold00096 2852 1 T C scaffold28379 Both SNP 0025.scaffold00096 2884 1 A G scaffold28379 Both SNP 0025.scaffold00096 2947 1 G A scaffold28379 ScafM INDEL 0025.scaffold00096 2981 1 A . scaffold28379 Both SNP 0025.scaffold00096 3042 1 G A scaffold28379 Both SNP 0025.scaffold00096 3315 1 T C scaffold28379 Both SNP 0025.scaffold00096 3319 1 C G scaffold28379 Both SNP 0025.scaffold00096 3381 1 T C scaffold28379 Both SNP 0025.scaffold00096 3383 1 T A scaffold28379 Both SNP 0025.scaffold00096 3502 1 C T scaffold28379 Both SNP 0025.scaffold00096 3511 1 C T scaffold28379 ReadM SNP 0025.scaffold00096 3601 1 T C - ReadM SNP 0025.scaffold00096 3646 1 C T - ReadM SNP 0025.scaffold00096 3673 1 A T - ReadM SNP 0025.scaffold00096 3813 1 A C - ReadM SNP 0025.scaffold00096 3855 1 G A - ReadM SNP 0025.scaffold00096 4074 1 T G - ReadM SNP 0025.scaffold00096 4412 1 A T - ReadM SNP 0025.scaffold00096 4435 1 C G - ReadM INDEL 0025.scaffold00096 4439 1 . A - ReadM SNP 0025.scaffold00096 4531 1 C T - ReadM SNP 0025.scaffold00096 4608 1 T G - ReadM SNP 0025.scaffold00096 4650 1 G A - ReadM SNP 0025.scaffold00096 4663 1 C A - ReadM SNP 0025.scaffold00096 4779 1 A C - ReadM SNP 0025.scaffold00096 5014 1 G A - ReadM SNP 0025.scaffold00096 5103 1 G C - ReadM SNP 0025.scaffold00096 5128 1 T C - ReadM SNP 0025.scaffold00096 5247 1 T C - ReadM SNP 0025.scaffold00096 5367 1 T C - ReadM SNP 0025.scaffold00096 5428 1 T C - ReadM SNP 0025.scaffold00096 5484 1 G A - ReadM SNP 0025.scaffold00096 5489 1 G A - ReadM SNP 0025.scaffold00096 5496 1 A T - ReadM SNP 0025.scaffold00096 5647 1 A G - Both SNP 0025.scaffold00096 6192 1 C T scaffold28379 ReadM SNP 0025.scaffold00096 6441 1 T A - ReadM SNP 0025.scaffold00096 6474 1 A C - ReadM SNP 0025.scaffold00096 6519 1 A T - ReadM SNP 0025.scaffold00096 6548 1 A C - ReadM SNP 0025.scaffold00096 7053 1 G A - ReadM SNP 0025.scaffold00096 7090 1 A T - ReadM SNP 0025.scaffold00096 7123 1 G A - ReadM SNP 0025.scaffold00096 7154 1 C A - ReadM SNP 0025.scaffold00096 7202 1 C T - ReadM SNP 0025.scaffold00096 7224 1 G A - ReadM SNP 0025.scaffold00096 8748 1 A G - ReadM SNP 0025.scaffold00096 8782 1 T A - ReadM SNP 0025.scaffold00096 9022 1 A G - ReadM SNP 0025.scaffold00096 9125 1 C A - ReadM SNP 0025.scaffold00096 9188 1 T C - ReadM SNP 0025.scaffold00096 9234 1 G A - ReadM SNP 0025.scaffold00096 9325 1 A G - ReadM SNP 0025.scaffold00096 9370 1 G A - ReadM SNP 0025.scaffold00096 9385 1 T C - ReadM SNP 0025.scaffold00096 9519 1 A G - ReadM SNP 0025.scaffold00096 9583 1 A T - ReadM SNP 0025.scaffold00096 9656 1 A G - ReadM SNP 0025.scaffold00096 9733 1 G A - ReadM SNP 0025.scaffold00096 9761 1 T A - ReadM SNP 0025.scaffold00096 9777 1 T C - ScafM SNP 0025.scaffold00096 9905 1 C T scaffold28379 Both SNP 0025.scaffold00096 10012 1 T A scaffold28379 ScafM SNP 0025.scaffold00096 10077 1 C T scaffold28379 Both SNP 0025.scaffold00096 10105 1 C T scaffold28379 Both SNP 0025.scaffold00096 10141 1 A T scaffold28379 Both SNP 0025.scaffold00096 10143 1 A T scaffold28379 Both SNP 0025.scaffold00096 10286 1 A G scaffold28379 ReadM SNP 0025.scaffold00096 10487 1 A G - Both SNP 0025.scaffold00096 10616 1 A T scaffold28379 Both SNP 0025.scaffold00096 10642 1 C A scaffold28379 Both SNP 0025.scaffold00096 10670 1 T C scaffold28379 Both SNP 0025.scaffold00096 10756 1 C T scaffold28379 Both SNP 0025.scaffold00096 10855 1 T G scaffold28379 ReadM SNP 0025.scaffold00096 10971 1 G C - ReadM SNP 0025.scaffold00096 11005 1 A G - ReadM SNP 0025.scaffold00096 11034 1 T C - ReadM SNP 0025.scaffold00096 11158 1 T C - ReadM SNP 0025.scaffold00096 11192 1 G T - ReadM SNP 0025.scaffold00096 11279 1 T G - ReadM SNP 0025.scaffold00096 11404 1 C T - ReadM SNP 0025.scaffold00096 11450 1 A C - ReadM SNP 0025.scaffold00096 14238 1 T A - ReadM SNP 0025.scaffold00096 14343 1 G A - ReadM SNP 0025.scaffold00096 14444 1 A T - ReadM SNP 0025.scaffold00096 16290 1 A G - ReadM SNP 0025.scaffold00096 16535 1 C G - ReadM SNP 0025.scaffold00096 16648 1 C T - ReadM SNP 0025.scaffold00096 16736 1 A T - ReadM SNP 0025.scaffold00096 16792 1 A G - ReadM SNP 0025.scaffold00096 17705 1 T C - ReadM SNP 0025.scaffold00096 17721 1 C T - ReadM SNP 0025.scaffold00096 17800 1 T C - ReadM SNP 0025.scaffold00096 17851 1 C T - ReadM SNP 0025.scaffold00096 17911 1 T A - ReadM SNP 0025.scaffold00096 17931 1 G A - ReadM SNP 0025.scaffold00096 17943 1 G T - ReadM SNP 0025.scaffold00096 17992 1 C T - ReadM SNP 0025.scaffold00096 17996 1 C G - ReadM SNP 0025.scaffold00096 18289 1 C T - ReadM SNP 0025.scaffold00096 18291 1 G T - ReadM SNP 0025.scaffold00096 18311 1 G T - ReadM SNP 0025.scaffold00096 18488 1 T C - ReadM SNP 0025.scaffold00096 18737 1 C T - ReadM SNP 0025.scaffold00096 18806 1 C T - ReadM SNP 0025.scaffold00096 18829 1 A G - ReadM SNP 0025.scaffold00096 18858 1 G C - ReadM SNP 0025.scaffold00096 18914 1 C A - ReadM SNP 0025.scaffold00096 18937 1 T C - ReadM SNP 0025.scaffold00096 19063 1 A G - ReadM INDEL 0025.scaffold00096 19069 1 . A - ReadM INDEL 0025.scaffold00096 19238 1 . T - ReadM SNP 0025.scaffold00096 19287 1 T A - ReadM SNP 0025.scaffold00096 19297 1 C A - ReadM SNP 0025.scaffold00096 19383 1 A C - ReadM SNP 0025.scaffold00096 19390 1 C A - ReadM SNP 0025.scaffold00096 19606 1 C T - ReadM INDEL 0025.scaffold00096 19698 1 T . - ReadM SNP 0025.scaffold00096 19725 1 C T - ReadM SNP 0025.scaffold00096 19782 1 T A - ReadM SNP 0025.scaffold00096 19888 1 A G - ReadM SNP 0025.scaffold00096 20169 1 A T - ReadM SNP 0025.scaffold00096 20392 1 T A - ReadM SNP 0025.scaffold00096 20404 1 G A - ScafM SNP 0025.scaffold00096 20432 1 C A scaffold9203 ReadM SNP 0025.scaffold00096 20492 1 T C - ReadM SNP 0025.scaffold00096 20583 1 T G - ReadM SNP 0025.scaffold00096 21006 1 G A - ReadM SNP 0025.scaffold00096 21043 1 C T - ReadM SNP 0025.scaffold00096 21072 1 A C - ReadM SNP 0025.scaffold00096 21172 1 C G - ReadM SNP 0025.scaffold00096 21233 1 A G - ReadM SNP 0025.scaffold00096 21286 1 C T - ReadM SNP 0025.scaffold00096 21309 1 G A - ReadM SNP 0025.scaffold00096 21547 2 AC GT - ReadM SNP 0025.scaffold00096 21633 1 A T - ReadM SNP 0025.scaffold00096 21710 1 T C - ReadM SNP 0025.scaffold00096 21750 1 G A - ReadM SNP 0025.scaffold00096 21767 1 A T - ReadM SNP 0025.scaffold00096 21798 1 A G - ReadM SNP 0025.scaffold00096 21903 1 G T - ReadM SNP 0025.scaffold00096 21921 1 T A - ReadM SNP 0025.scaffold00096 22013 1 G C - ReadM SNP 0025.scaffold00096 22068 1 G T - ReadM SNP 0025.scaffold00096 22199 1 A C - ReadM SNP 0025.scaffold00096 22220 1 C T - ReadM SNP 0025.scaffold00096 22298 1 C G - ReadM SNP 0025.scaffold00096 22317 1 T A - ReadM SNP 0025.scaffold00096 22379 1 C G - ReadM SNP 0025.scaffold00096 22395 1 G A - ReadM SNP 0025.scaffold00096 22426 1 A G - ReadM SNP 0025.scaffold00096 22588 1 A C - ReadM SNP 0025.scaffold00096 22616 1 A C - ReadM SNP 0025.scaffold00096 22659 1 T G - ReadM SNP 0025.scaffold00096 22677 1 G A - ReadM SNP 0025.scaffold00096 22737 1 C A - ReadM SNP 0025.scaffold00096 22800 1 C T - ReadM SNP 0025.scaffold00096 22848 1 C A - ReadM SNP 0025.scaffold00096 22854 1 A T - ReadM SNP 0025.scaffold00096 22938 1 G A - ReadM SNP 0025.scaffold00096 22970 1 G A - ReadM SNP 0025.scaffold00096 23083 1 T C - ReadM SNP 0025.scaffold00096 23150 1 T G - ReadM SNP 0025.scaffold00096 23279 1 T C - ReadM SNP 0025.scaffold00096 23289 1 G C - ReadM SNP 0025.scaffold00096 23361 1 G A - ReadM SNP 0025.scaffold00096 23404 1 A G - ReadM SNP 0025.scaffold00096 23501 1 T C - ReadM SNP 0025.scaffold00096 23519 1 T C - ReadM SNP 0025.scaffold00096 23580 1 G A - ReadM INDEL 0025.scaffold00096 23653 1 T . - ReadM SNP 0025.scaffold00096 23703 1 G T - ReadM SNP 0025.scaffold00096 23768 1 T C - ReadM SNP 0025.scaffold00096 24057 1 G T - ReadM SNP 0025.scaffold00096 24162 1 A C - ReadM SNP 0025.scaffold00096 24209 1 C T - ReadM SNP 0025.scaffold00096 24224 1 T C - ReadM INDEL 0025.scaffold00096 24258 1 G . - ReadM SNP 0025.scaffold00096 24622 1 G A - ReadM SNP 0025.scaffold00096 24711 1 A G - ReadM SNP 0025.scaffold00096 24754 1 G C - ReadM SNP 0025.scaffold00096 25040 1 C T - ReadM SNP 0025.scaffold00096 25057 1 T C - ReadM SNP 0025.scaffold00096 25210 1 G A - ReadM SNP 0025.scaffold00096 25234 1 A C - ReadM SNP 0025.scaffold00096 25321 1 G T - ReadM SNP 0025.scaffold00096 25477 1 T C - ReadM SNP 0025.scaffold00096 25557 1 A C - ReadM SNP 0025.scaffold00096 25599 1 C T - ReadM SNP 0025.scaffold00096 25661 1 T G - ReadM SNP 0025.scaffold00096 25669 1 C A - ReadM SNP 0025.scaffold00096 25698 1 G C - ReadM SNP 0025.scaffold00096 25839 1 A C - ReadM SNP 0025.scaffold00096 25844 1 G A - ReadM SNP 0025.scaffold00096 26040 1 A T - ReadM SNP 0025.scaffold00096 26185 1 C G - ReadM SNP 0025.scaffold00096 26188 1 G T - ReadM SNP 0025.scaffold00096 26568 1 G A - ReadM SNP 0025.scaffold00096 26585 1 A C - ReadM SNP 0025.scaffold00096 26647 1 G A - ReadM SNP 0025.scaffold00096 26664 1 C T - ReadM SNP 0025.scaffold00096 26681 1 A G - ReadM SNP 0025.scaffold00096 26755 1 C A - ReadM SNP 0025.scaffold00096 26873 1 T C - ReadM SNP 0025.scaffold00096 26886 1 C T - ReadM SNP 0025.scaffold00096 26933 1 T C - ReadM SNP 0025.scaffold00096 26956 1 A G - ReadM SNP 0025.scaffold00096 27063 1 G T - ReadM SNP 0025.scaffold00096 27115 1 A G - ReadM SNP 0025.scaffold00096 27146 1 A T - ReadM INDEL 0025.scaffold00096 27179 1 T . - ReadM SNP 0025.scaffold00096 27350 1 A G - ReadM SNP 0025.scaffold00096 27483 1 T G - ReadM SNP 0025.scaffold00096 27616 1 A G - ReadM SNP 0025.scaffold00096 27675 1 C T - ReadM SNP 0025.scaffold00096 27787 1 T A - ReadM SNP 0025.scaffold00096 27795 1 G T - ReadM SNP 0025.scaffold00096 27800 1 C G - ReadM SNP 0025.scaffold00096 28079 1 G T - ReadM SNP 0025.scaffold00096 28103 1 G A - ReadM SNP 0025.scaffold00096 28114 1 G C - ReadM SNP 0025.scaffold00096 28143 1 G C - ReadM SNP 0025.scaffold00096 28337 1 A G - ReadM SNP 0025.scaffold00096 28547 1 T G - ReadM SNP 0025.scaffold00096 28573 1 T C - ReadM SNP 0025.scaffold00096 28622 1 T C - ReadM SNP 0025.scaffold00096 28718 1 A G - ReadM SNP 0025.scaffold00096 28775 1 T C - ReadM SNP 0025.scaffold00096 29056 1 C T - ReadM SNP 0025.scaffold00096 29070 1 T C - ReadM SNP 0025.scaffold00096 29111 1 A G - ReadM SNP 0025.scaffold00096 29158 1 C G - ReadM SNP 0025.scaffold00096 29193 1 G T - ReadM INDEL 0025.scaffold00096 29224 1 A . - ReadM SNP 0025.scaffold00096 29288 1 A C - ReadM SNP 0025.scaffold00096 29360 1 G T - ReadM SNP 0025.scaffold00096 29390 1 C T - ReadM SNP 0025.scaffold00096 29452 1 T C - ReadM SNP 0025.scaffold00096 29691 1 C G - ReadM SNP 0025.scaffold00096 29699 1 A T - ReadM SNP 0025.scaffold00096 29706 1 G A - ReadM SNP 0025.scaffold00096 29722 1 A C - ReadM SNP 0025.scaffold00096 29804 1 A G - ReadM SNP 0025.scaffold00096 29830 1 C T - ReadM SNP 0025.scaffold00096 29892 1 C T - ReadM SNP 0025.scaffold00096 30113 1 A G - ReadM SNP 0025.scaffold00096 30272 1 T G - ReadM SNP 0025.scaffold00096 30329 1 A G - ReadM SNP 0025.scaffold00096 30415 1 G A - ReadM SNP 0025.scaffold00096 30433 1 C A - ReadM SNP 0025.scaffold00096 30464 1 C G - ReadM SNP 0025.scaffold00096 30518 1 G A - ReadM SNP 0025.scaffold00096 30679 1 G T - ReadM SNP 0025.scaffold00096 30782 1 T C - ReadM SNP 0025.scaffold00096 31008 1 G A - ReadM SNP 0025.scaffold00096 31048 1 G A - ReadM SNP 0025.scaffold00096 31164 1 G A - Both SNP 0025.scaffold00096 31234 1 G C scaffold7107 Both SNP 0025.scaffold00096 31304 1 A T scaffold7107 Both SNP 0025.scaffold00096 31405 1 A C scaffold7107 ScafM SNP 0025.scaffold00096 31440 1 C T scaffold7107 ScafM SNP 0025.scaffold00096 31652 1 T A scaffold7107 ScafM SNP 0025.scaffold00096 31889 1 A G scaffold7107 ReadM SNP 0025.scaffold00096 32240 1 T A - Both SNP 0025.scaffold00096 32265 1 C A scaffold7107 Both SNP 0025.scaffold00096 32559 1 C T scaffold7107 Both SNP 0025.scaffold00096 32603 1 T C scaffold7107 Both SNP 0025.scaffold00096 32607 1 A G scaffold7107 Both SNP 0025.scaffold00096 32693 1 T C scaffold7107 Both SNP 0025.scaffold00096 32711 1 A C scaffold7107 Both SNP 0025.scaffold00096 32904 1 T A scaffold7107 Both SNP 0025.scaffold00096 33132 1 G A scaffold7107 Both SNP 0025.scaffold00096 33294 1 G A scaffold7107 Both SNP 0025.scaffold00096 33303 1 T C scaffold7107 Both SNP 0025.scaffold00096 33330 1 G C scaffold7107 ReadM SNP 0025.scaffold00096 33556 1 C G - ReadM INDEL 0025.scaffold00096 33758 1 T . - ReadM SNP 0025.scaffold00096 33794 1 C T - Both SNP 0025.scaffold00096 33806 1 C A scaffold7107 Both SNP 0025.scaffold00096 33813 1 C A scaffold7107 ReadM SNP 0025.scaffold00096 33878 1 C G - ReadM SNP 0025.scaffold00096 33942 1 G A - ReadM SNP 0025.scaffold00096 34035 1 A C - ReadM SNP 0025.scaffold00096 34127 1 C T - ReadM SNP 0025.scaffold00096 34165 1 C T - ReadM SNP 0025.scaffold00096 34185 1 C A - ReadM INDEL 0025.scaffold00096 34568 2 .. AT - ReadM SNP 0025.scaffold00096 34678 1 C T - ReadM SNP 0025.scaffold00096 34719 1 T G - ReadM SNP 0025.scaffold00096 34723 1 C T - Both SNP 0025.scaffold00096 34824 1 A C scaffold7107 ReadM SNP 0025.scaffold00096 34933 1 C A - ReadM SNP 0025.scaffold00096 34940 1 G T - ReadM SNP 0025.scaffold00096 34954 1 G A - ReadM SNP 0025.scaffold00096 35248 1 C T - ReadM SNP 0025.scaffold00096 35279 1 A C - ReadM SNP 0025.scaffold00096 35340 1 A G - ReadM SNP 0025.scaffold00096 35564 1 C T - ReadM SNP 0025.scaffold00096 35606 1 G A - ReadM SNP 0025.scaffold00096 35653 1 T C - ReadM SNP 0025.scaffold00096 35681 1 T C - ReadM SNP 0025.scaffold00096 35811 1 A G - ReadM SNP 0025.scaffold00096 35846 1 A C - ReadM SNP 0025.scaffold00096 35979 1 T G - ReadM SNP 0025.scaffold00096 35982 1 T C - ReadM SNP 0025.scaffold00096 36108 1 G A - ReadM SNP 0025.scaffold00096 36161 1 A G - ReadM SNP 0025.scaffold00096 36293 1 C T - ReadM SNP 0025.scaffold00096 36305 1 C G - ReadM INDEL 0025.scaffold00096 36349 1 . T - ReadM SNP 0025.scaffold00096 36381 1 T A - ReadM SNP 0025.scaffold00096 36491 1 T A - ReadM SNP 0025.scaffold00096 36562 1 G A - ReadM SNP 0025.scaffold00096 36567 1 T G - ReadM SNP 0025.scaffold00096 36604 1 G C - ReadM SNP 0025.scaffold00096 36785 1 T G - ReadM SNP 0025.scaffold00096 36909 1 A G - ReadM SNP 0025.scaffold00096 36981 1 T G - ReadM SNP 0025.scaffold00096 37078 1 C T - ReadM SNP 0025.scaffold00096 37106 1 A G - ReadM SNP 0025.scaffold00096 37109 1 C T - ReadM SNP 0025.scaffold00096 37170 1 A T - ReadM SNP 0025.scaffold00096 37181 1 G A - ReadM SNP 0025.scaffold00096 37194 1 C A - ReadM SNP 0025.scaffold00096 37320 1 T C - ReadM SNP 0025.scaffold00096 37376 1 C G - ReadM SNP 0025.scaffold00096 37398 1 C T - ReadM SNP 0025.scaffold00096 37482 1 T C - ReadM SNP 0025.scaffold00096 37499 1 T C - ReadM SNP 0025.scaffold00096 37543 1 A C - ReadM SNP 0025.scaffold00096 37587 1 G A - ReadM SNP 0025.scaffold00096 37619 1 G A - ReadM SNP 0025.scaffold00096 37676 1 A T - ReadM SNP 0025.scaffold00096 37749 1 C T - ReadM SNP 0025.scaffold00096 37933 1 G A - ReadM SNP 0025.scaffold00096 37990 1 G A - ReadM SNP 0025.scaffold00096 37994 1 C T - ReadM SNP 0025.scaffold00096 38044 1 G T - ReadM SNP 0025.scaffold00096 38269 1 A T - ReadM SNP 0025.scaffold00096 38306 1 A G - ReadM INDEL 0025.scaffold00096 38434 3 TGC ... - ReadM SNP 0025.scaffold00096 38515 1 C T - ReadM SNP 0025.scaffold00096 38554 1 T C - ReadM INDEL 0025.scaffold00096 38723 1 . T - ReadM INDEL 0025.scaffold00096 38902 1 A . - ScafM INDEL 0025.scaffold00096 39220 2 TT .. scaffold7107 ScafM INDEL 0025.scaffold00096 39236 1 A . scaffold7107 Both SNP 0025.scaffold00096 39242 1 C T scaffold7107 Both SNP 0025.scaffold00096 39397 1 G T scaffold7107 ReadM SNP 0025.scaffold00096 39497 1 T A - Both SNP 0025.scaffold00096 39568 1 T A scaffold7107 Both SNP 0025.scaffold00096 39624 1 A C scaffold7107 Both SNP 0025.scaffold00096 39648 1 G A scaffold7107 Both SNP 0025.scaffold00096 39662 1 T A scaffold7107 Both SNP 0025.scaffold00096 39737 1 G T scaffold7107 ScafM SNP 0025.scaffold00096 39759 1 G A scaffold7107 ScafM SNP 0025.scaffold00096 39805 1 C T scaffold7107 ScafM INDEL 0025.scaffold00096 39830 3 GAC ... scaffold7107 ScafM INDEL 0025.scaffold00096 39834 1 C . scaffold7107 ScafM INDEL 0025.scaffold00096 39837 3 GAA ... scaffold7107 ScafM INDEL 0025.scaffold00096 39843 35 GCAACTTTCAAGGTGTCGTCGCTTCGGTGATTCAC ................................... scaffold7107 ScafM INDEL 0025.scaffold00096 39882 29 GCCCTGATACATTTTTGGTGCCATGGAGC ............................. scaffold7107 ScafM INDEL 0025.scaffold00096 39912 3 AGA ... scaffold7107 ScafM SNP 0025.scaffold00096 39951 1 T C scaffold7107 ReadM SNP 0025.scaffold00096 39994 1 G A - ReadM SNP 0025.scaffold00096 40219 1 T G - ReadM SNP 0025.scaffold00096 40249 1 T C - ReadM SNP 0025.scaffold00096 40271 1 T A - ReadM SNP 0025.scaffold00096 40351 1 G T - ReadM SNP 0025.scaffold00096 40429 1 A G - ReadM SNP 0025.scaffold00096 40461 1 C A - ReadM SNP 0025.scaffold00096 40487 1 C T - Both SNP 0025.scaffold00096 40786 1 T A scaffold7107 Both SNP 0025.scaffold00096 40933 1 C A scaffold7107 Both SNP 0025.scaffold00096 41057 1 A G scaffold7107 ReadM SNP 0025.scaffold00096 41258 1 T C - ReadM SNP 0025.scaffold00096 41347 1 T C - ReadM SNP 0025.scaffold00096 41364 1 A C - ReadM SNP 0025.scaffold00096 41376 1 T C - ReadM SNP 0025.scaffold00096 41432 1 A G - ReadM SNP 0025.scaffold00096 41436 1 A C - ReadM SNP 0025.scaffold00096 41686 1 T A - ReadM SNP 0025.scaffold00096 41691 1 A C - Both SNP 0025.scaffold00096 41954 1 G A scaffold7107 Both SNP 0025.scaffold00096 42009 1 C T scaffold7107 Both SNP 0025.scaffold00096 42024 1 T C scaffold7107 Both SNP 0025.scaffold00096 42097 1 T A scaffold7107 Both SNP 0025.scaffold00096 42241 1 G A scaffold7107 ReadM SNP 0025.scaffold00096 42419 1 T C - ReadM SNP 0025.scaffold00096 42449 1 G C - ReadM INDEL 0025.scaffold00096 42570 3 ... AAA - ReadM SNP 0025.scaffold00096 42686 1 A G - ReadM SNP 0025.scaffold00096 42748 1 A C - ReadM SNP 0025.scaffold00096 42771 1 C T - ReadM SNP 0025.scaffold00096 42871 1 C G - ReadM SNP 0025.scaffold00096 43091 1 C T - ReadM SNP 0025.scaffold00096 43158 1 C T - ReadM SNP 0025.scaffold00096 43387 1 G A - ReadM SNP 0025.scaffold00096 43416 1 G A - ReadM INDEL 0025.scaffold00096 43525 1 G . - ReadM SNP 0025.scaffold00096 43532 1 A G - ReadM SNP 0025.scaffold00096 43557 1 C T - ReadM SNP 0025.scaffold00096 43587 1 G C - ReadM SNP 0025.scaffold00096 43886 1 T G - ReadM SNP 0025.scaffold00096 44016 1 A G - ReadM SNP 0025.scaffold00096 44021 1 T A - ReadM SNP 0025.scaffold00096 44116 1 C T - ReadM SNP 0025.scaffold00096 44122 1 T C - ReadM SNP 0025.scaffold00096 44213 1 G T - ReadM SNP 0025.scaffold00096 44400 1 T G - ReadM SNP 0025.scaffold00096 44411 1 T G - ReadM SNP 0025.scaffold00096 44474 1 G A - ReadM SNP 0025.scaffold00096 44513 1 G A - ReadM SNP 0025.scaffold00096 44591 1 C T - ReadM SNP 0025.scaffold00096 44645 1 C T - ReadM SNP 0025.scaffold00096 44769 1 G A - ReadM SNP 0025.scaffold00096 44801 1 C G - ReadM SNP 0025.scaffold00096 44930 1 G T - ReadM INDEL 0025.scaffold00096 44946 1 . G - ReadM SNP 0025.scaffold00096 45075 1 G A - ReadM SNP 0025.scaffold00096 45139 1 C G - ReadM SNP 0025.scaffold00096 45223 1 C T - ReadM SNP 0025.scaffold00096 45288 1 C T - ReadM SNP 0025.scaffold00096 45328 1 T C - ReadM SNP 0025.scaffold00096 45356 1 A G - ReadM SNP 0025.scaffold00096 45517 2 TT CA - ReadM SNP 0025.scaffold00096 45566 1 G A - ReadM SNP 0025.scaffold00096 45609 1 T C - ReadM SNP 0025.scaffold00096 45649 1 C G - ReadM SNP 0025.scaffold00096 45808 1 A C - ReadM SNP 0025.scaffold00096 45843 1 T A - ReadM SNP 0025.scaffold00096 45873 1 T A - ReadM INDEL 0025.scaffold00096 45892 1 . G - ReadM SNP 0025.scaffold00096 46009 1 A C - ReadM SNP 0025.scaffold00096 46018 1 G A - ReadM SNP 0025.scaffold00096 46044 1 A G - ReadM SNP 0025.scaffold00096 46101 1 T C - ReadM SNP 0025.scaffold00096 46296 1 C T - ReadM SNP 0025.scaffold00096 46310 1 T G - ReadM SNP 0025.scaffold00096 46417 1 T C - ReadM SNP 0025.scaffold00096 46473 1 T C - ReadM SNP 0025.scaffold00096 46654 1 C T - ReadM SNP 0025.scaffold00096 46703 1 A G - ReadM SNP 0025.scaffold00096 46831 1 T C - ReadM SNP 0025.scaffold00096 46958 1 C A - ReadM SNP 0025.scaffold00096 46979 1 A G - ReadM SNP 0025.scaffold00096 47059 1 C T - ReadM SNP 0025.scaffold00096 47114 1 C T - ReadM SNP 0025.scaffold00096 47139 1 T C - ReadM SNP 0025.scaffold00096 47166 1 A C - ReadM SNP 0025.scaffold00096 47227 1 A T - ReadM SNP 0025.scaffold00096 47297 1 C A - ReadM SNP 0025.scaffold00096 47319 1 T C - ReadM SNP 0025.scaffold00096 47324 1 T G - ReadM SNP 0025.scaffold00096 47381 1 C T - ReadM SNP 0025.scaffold00096 47469 1 T C - ReadM SNP 0025.scaffold00096 47504 1 A G - ReadM SNP 0025.scaffold00096 47518 1 A T - ReadM SNP 0025.scaffold00096 47605 1 C G - ReadM SNP 0025.scaffold00096 47769 1 T C - ReadM SNP 0025.scaffold00096 47784 1 C A - ReadM SNP 0025.scaffold00096 47800 1 T C - ReadM SNP 0025.scaffold00096 47865 1 C T - ReadM SNP 0025.scaffold00096 47910 1 G A - ReadM SNP 0025.scaffold00096 47921 1 A C - ReadM SNP 0025.scaffold00096 47960 1 G C - ReadM SNP 0025.scaffold00096 47985 1 G A - ReadM SNP 0025.scaffold00096 48057 1 C A - ReadM SNP 0025.scaffold00096 48123 1 T C - ReadM SNP 0025.scaffold00096 48136 1 T A - ReadM SNP 0025.scaffold00096 48193 1 G C - ReadM SNP 0025.scaffold00096 48202 1 A T - ReadM SNP 0025.scaffold00096 48297 1 G C - ReadM SNP 0025.scaffold00096 48463 1 G C - ReadM SNP 0025.scaffold00096 48582 1 G C - ReadM SNP 0025.scaffold00096 49036 1 C T - ReadM SNP 0025.scaffold00096 49150 1 T C - ReadM SNP 0025.scaffold00096 49158 1 T C - ReadM SNP 0025.scaffold00096 49277 1 T C - ReadM SNP 0025.scaffold00096 49396 1 C T - Both SNP 0025.scaffold00096 49708 1 G C scaffold18901 Both SNP 0025.scaffold00096 49765 1 A G scaffold18901 Both SNP 0025.scaffold00096 49782 1 T C scaffold18901 Both SNP 0025.scaffold00096 49814 1 C T scaffold18901 Both SNP 0025.scaffold00096 49850 1 G A scaffold18901 Both SNP 0025.scaffold00096 49875 1 T C scaffold18901 ReadM SNP 0025.scaffold00096 49915 1 A G - ReadM SNP 0025.scaffold00096 50055 1 C T - ReadM SNP 0025.scaffold00096 50166 1 C G - ReadM SNP 0025.scaffold00096 50173 1 C T - ReadM SNP 0025.scaffold00096 50179 1 G T - ReadM SNP 0025.scaffold00096 50305 1 A T - ReadM SNP 0025.scaffold00096 50320 1 A G - ReadM SNP 0025.scaffold00096 50491 1 A G - ReadM SNP 0025.scaffold00096 50538 1 T C - ReadM SNP 0025.scaffold00096 50581 1 A G - ReadM SNP 0025.scaffold00096 50664 1 A T - ReadM SNP 0025.scaffold00096 50721 1 C G - ReadM SNP 0025.scaffold00096 50731 1 T C - ReadM SNP 0025.scaffold00096 50738 1 T G - ReadM SNP 0025.scaffold00096 50834 1 T C - ReadM SNP 0025.scaffold00096 50942 1 C T - ReadM SNP 0025.scaffold00096 50957 1 G A - ReadM SNP 0025.scaffold00096 51318 1 A G - ReadM SNP 0025.scaffold00096 51412 1 C T - ReadM SNP 0025.scaffold00096 51482 1 T A - ReadM SNP 0025.scaffold00096 51513 1 T C - ReadM SNP 0025.scaffold00096 51617 1 G A - ReadM SNP 0025.scaffold00096 51750 1 C T - ReadM SNP 0025.scaffold00096 51939 1 G C - ReadM SNP 0025.scaffold00096 52028 1 T A - ReadM SNP 0025.scaffold00096 52126 1 T C - ReadM SNP 0025.scaffold00096 52173 1 A G - ReadM SNP 0025.scaffold00096 52216 1 G C - ReadM SNP 0025.scaffold00096 52327 1 G T - ReadM SNP 0025.scaffold00096 52398 1 C T - ReadM SNP 0025.scaffold00096 52401 1 C T - ReadM SNP 0025.scaffold00096 52586 1 A C - ReadM SNP 0025.scaffold00096 52763 1 A T - ReadM SNP 0025.scaffold00096 52775 1 C T - ReadM SNP 0025.scaffold00096 53015 1 G A - ReadM SNP 0025.scaffold00096 53132 1 T C - ReadM SNP 0025.scaffold00096 53226 1 C T - ReadM SNP 0025.scaffold00096 53239 1 C T - ReadM INDEL 0025.scaffold00096 53287 1 . C - ReadM SNP 0025.scaffold00096 53439 1 G C - ReadM SNP 0025.scaffold00096 53526 1 C A - ReadM SNP 0025.scaffold00096 53554 1 C T - ReadM SNP 0025.scaffold00096 53643 1 T C - ReadM SNP 0025.scaffold00096 53674 1 C A - ReadM SNP 0025.scaffold00096 53689 1 T C - ReadM SNP 0025.scaffold00096 53716 1 T G - ReadM SNP 0025.scaffold00096 53726 1 G A - ReadM SNP 0025.scaffold00096 54066 1 C T - ReadM SNP 0025.scaffold00096 54083 1 C T - ReadM SNP 0025.scaffold00096 54220 1 T G - ReadM INDEL 0025.scaffold00096 54229 1 T . - ReadM SNP 0025.scaffold00096 54257 1 A G - ReadM SNP 0025.scaffold00096 54329 1 G A - ReadM SNP 0025.scaffold00096 54392 1 A G - ReadM SNP 0025.scaffold00096 54425 1 A G - ReadM SNP 0025.scaffold00096 54437 1 T A - ReadM SNP 0025.scaffold00096 54666 1 G A - ReadM SNP 0025.scaffold00096 54710 1 T G - ReadM SNP 0025.scaffold00096 54824 1 G A - ReadM SNP 0025.scaffold00096 54831 1 A G - ReadM SNP 0025.scaffold00096 55072 1 A G - ReadM SNP 0025.scaffold00096 55146 1 A G - ReadM SNP 0025.scaffold00096 55177 1 C G - ReadM SNP 0025.scaffold00096 55333 1 A G - ReadM SNP 0025.scaffold00096 57301 1 A G - ReadM SNP 0025.scaffold00096 57876 1 T A - ReadM SNP 0025.scaffold00096 58336 1 A G - ReadM SNP 0025.scaffold00096 58471 1 A C - ReadM SNP 0025.scaffold00096 58569 1 C T - ReadM SNP 0025.scaffold00096 58940 1 A T - ReadM SNP 0025.scaffold00096 59397 1 C A - ReadM SNP 0025.scaffold00096 60414 1 G T - ReadM SNP 0025.scaffold00096 60462 1 G A - ReadM SNP 0025.scaffold00096 60534 1 T A - ReadM SNP 0025.scaffold00096 60537 1 T C - ReadM SNP 0025.scaffold00096 60683 1 A G - ReadM SNP 0025.scaffold00096 60713 1 G T - ReadM SNP 0025.scaffold00096 60770 1 C G - Both INDEL 0025.scaffold00096 60791 1 T . scaffold209 Both SNP 0025.scaffold00096 60893 1 A T scaffold209 Both SNP 0025.scaffold00096 60944 1 G A scaffold209 Both SNP 0025.scaffold00096 60948 1 G A scaffold209 Both SNP 0025.scaffold00096 61000 1 G T scaffold209 Both SNP 0025.scaffold00096 61044 1 T A scaffold209 Both SNP 0025.scaffold00096 61058 1 A G scaffold209 ReadM SNP 0025.scaffold00096 61224 1 C T - ScafM SNP 0025.scaffold00096 61642 1 A G scaffold22619 ScafM SNP 0025.scaffold00096 61652 1 T C scaffold22619 ReadM SNP 0025.scaffold00096 77597 1 A G - ReadM SNP 0025.scaffold00096 78162 1 G A - ReadM SNP 0025.scaffold00096 78256 1 C G - ReadM SNP 0025.scaffold00096 78264 1 T G - ReadM SNP 0025.scaffold00096 78299 1 C T - ReadM SNP 0025.scaffold00096 78423 1 T C - ReadM SNP 0025.scaffold00096 78492 1 G A - ReadM SNP 0025.scaffold00096 78589 1 C T - ReadM SNP 0025.scaffold00096 78752 1 T C - ReadM SNP 0025.scaffold00096 78754 1 A G - ReadM SNP 0025.scaffold00096 78771 1 A C - ReadM SNP 0025.scaffold00096 78976 1 G A - ReadM SNP 0025.scaffold00096 79200 1 G A - ReadM SNP 0025.scaffold00096 79224 1 T G - ReadM SNP 0025.scaffold00096 79298 1 G C - ReadM SNP 0025.scaffold00096 79422 1 C T - ReadM SNP 0025.scaffold00096 79554 1 C T - ReadM SNP 0025.scaffold00096 79589 1 T C - ReadM SNP 0025.scaffold00096 79612 1 A G - ReadM SNP 0025.scaffold00096 79750 1 A G - ReadM SNP 0025.scaffold00096 79767 1 C A - ReadM SNP 0025.scaffold00096 79839 1 A G - ReadM SNP 0025.scaffold00096 79909 1 G T - ReadM SNP 0025.scaffold00096 80086 1 G A - ReadM SNP 0025.scaffold00096 80107 1 G T - ReadM SNP 0025.scaffold00096 80134 1 C T - ReadM SNP 0025.scaffold00096 80141 1 C T - ReadM SNP 0025.scaffold00096 80539 1 A T - ReadM SNP 0025.scaffold00096 80553 1 C T - ReadM SNP 0025.scaffold00096 80557 1 T C - ReadM SNP 0025.scaffold00096 80640 1 A C - ReadM SNP 0025.scaffold00096 80957 1 T C - ReadM SNP 0025.scaffold00096 81003 1 G C - ReadM SNP 0025.scaffold00096 81129 1 G A - ReadM SNP 0025.scaffold00096 81154 1 G A - ReadM SNP 0025.scaffold00096 81175 1 T C - ReadM SNP 0025.scaffold00096 81708 1 A T - ReadM SNP 0025.scaffold00096 81901 1 A G - ReadM SNP 0025.scaffold00096 81977 1 T C - ReadM SNP 0025.scaffold00096 82118 1 T C - ReadM SNP 0025.scaffold00096 82240 1 T C - ReadM SNP 0025.scaffold00096 82277 1 T C - ReadM SNP 0025.scaffold00096 82321 1 G A - ReadM SNP 0025.scaffold00096 82347 1 C G - ReadM SNP 0025.scaffold00096 82678 1 A G - ReadM SNP 0025.scaffold00096 82710 1 T C - ReadM SNP 0025.scaffold00096 82719 1 A G - ReadM SNP 0025.scaffold00096 84405 1 T C - ReadM SNP 0025.scaffold00096 84555 1 G A - ReadM SNP 0025.scaffold00096 84696 1 C T - ReadM SNP 0025.scaffold00096 84724 1 C T - ReadM SNP 0025.scaffold00096 84741 1 G C - ReadM SNP 0025.scaffold00096 84792 1 T C - ReadM SNP 0025.scaffold00096 84871 1 A T - ReadM SNP 0025.scaffold00096 84975 1 G T - ReadM SNP 0025.scaffold00096 85145 1 C T - ReadM SNP 0025.scaffold00096 85179 1 T A - ReadM SNP 0025.scaffold00096 85341 1 G C - ReadM SNP 0025.scaffold00096 85777 1 T G - ReadM SNP 0025.scaffold00096 85805 1 A C - ReadM SNP 0025.scaffold00096 85888 1 G T - ReadM SNP 0025.scaffold00096 85968 1 G A - ScafM SNP 0025.scaffold00096 86151 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 86274 1 A C scaffold1372 ReadM SNP 0025.scaffold00096 86541 1 A G - ReadM SNP 0025.scaffold00096 86562 1 C T - ReadM SNP 0025.scaffold00096 86592 1 T C - ReadM SNP 0025.scaffold00096 86748 1 T A - ReadM SNP 0025.scaffold00096 86826 1 T G - ReadM SNP 0025.scaffold00096 86986 1 A G - ReadM SNP 0025.scaffold00096 87111 1 T G - ReadM SNP 0025.scaffold00096 87199 1 G A - ReadM SNP 0025.scaffold00096 87209 1 C T - ReadM SNP 0025.scaffold00096 87211 1 A G - ReadM SNP 0025.scaffold00096 87445 1 C T - ReadM SNP 0025.scaffold00096 87450 1 C T - ReadM SNP 0025.scaffold00096 87471 1 G A - ReadM SNP 0025.scaffold00096 87490 1 G C - ReadM INDEL 0025.scaffold00096 87532 1 . G - ReadM SNP 0025.scaffold00096 87641 1 G A - ReadM SNP 0025.scaffold00096 87712 1 A G - ReadM SNP 0025.scaffold00096 87725 1 G A - ReadM SNP 0025.scaffold00096 87824 1 G T - ReadM SNP 0025.scaffold00096 88106 1 G T - ReadM SNP 0025.scaffold00096 88287 1 T A - ReadM INDEL 0025.scaffold00096 88505 1 G . - ReadM SNP 0025.scaffold00096 88652 1 C A - ReadM SNP 0025.scaffold00096 88697 1 T C - ReadM INDEL 0025.scaffold00096 88755 3 ATA ... - ReadM SNP 0025.scaffold00096 88897 1 T C - ReadM SNP 0025.scaffold00096 89201 1 A C - ReadM SNP 0025.scaffold00096 89274 1 A G - ReadM SNP 0025.scaffold00096 89599 1 T A - ReadM SNP 0025.scaffold00096 89700 1 T C - ReadM SNP 0025.scaffold00096 89741 1 C T - ReadM SNP 0025.scaffold00096 89888 1 G T - ReadM SNP 0025.scaffold00096 90102 1 T G - ReadM SNP 0025.scaffold00096 90215 1 G A - ReadM SNP 0025.scaffold00096 90220 1 T C - ReadM SNP 0025.scaffold00096 90282 1 T C - ReadM SNP 0025.scaffold00096 90338 1 A G - ReadM SNP 0025.scaffold00096 90375 1 T A - ReadM SNP 0025.scaffold00096 90600 1 T G - ReadM SNP 0025.scaffold00096 90644 1 T C - Both SNP 0025.scaffold00096 90807 1 A T scaffold1372 Both SNP 0025.scaffold00096 90842 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 91027 1 A T scaffold1372 Both SNP 0025.scaffold00096 91231 1 T G scaffold1372 Both SNP 0025.scaffold00096 91271 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 91379 1 T G scaffold1372 ScafM INDEL 0025.scaffold00096 91381 3 TTT ... scaffold1372 Both SNP 0025.scaffold00096 91503 1 T G scaffold1372 Both INDEL 0025.scaffold00096 91586 1 . T scaffold1372 Both SNP 0025.scaffold00096 91676 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 91715 1 G C scaffold1372 ScafM INDEL 0025.scaffold00096 91725 3 ... ACA scaffold1372 Both SNP 0025.scaffold00096 91801 1 T G scaffold1372 ReadM INDEL 0025.scaffold00096 91825 1 . A - ReadM SNP 0025.scaffold00096 91854 1 G T - ReadM SNP 0025.scaffold00096 91913 1 C A - ReadM SNP 0025.scaffold00096 91941 1 C T - ReadM SNP 0025.scaffold00096 92062 1 T C - ReadM SNP 0025.scaffold00096 92363 1 A C - ReadM SNP 0025.scaffold00096 92381 1 A G - ReadM SNP 0025.scaffold00096 92411 1 C A - ReadM SNP 0025.scaffold00096 92497 1 G A - ReadM SNP 0025.scaffold00096 92595 1 T G - ReadM SNP 0025.scaffold00096 92891 1 C T - ReadM SNP 0025.scaffold00096 92929 1 G A - ReadM SNP 0025.scaffold00096 93054 1 C T - ReadM SNP 0025.scaffold00096 93095 1 G A - ReadM SNP 0025.scaffold00096 93186 1 C T - ReadM SNP 0025.scaffold00096 93559 1 C G - ReadM SNP 0025.scaffold00096 93591 1 A C - ScafM SNP 0025.scaffold00096 93820 1 T G scaffold1372 Both SNP 0025.scaffold00096 93995 1 C T scaffold1372 ReadM SNP 0025.scaffold00096 94167 1 A T - ReadM SNP 0025.scaffold00096 94708 1 A G - ReadM SNP 0025.scaffold00096 94769 1 C T - ReadM SNP 0025.scaffold00096 94810 1 A G - ScafM SNP 0025.scaffold00096 94938 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 95013 1 . T scaffold1372 ScafM SNP 0025.scaffold00096 95142 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 95147 1 T G scaffold1372 Both SNP 0025.scaffold00096 95241 1 A G scaffold1372 Both SNP 0025.scaffold00096 95276 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 95549 1 C A scaffold1372 ScafM INDEL 0025.scaffold00096 95558 3 ... AAT scaffold1372 ScafM SNP 0025.scaffold00096 95599 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 95626 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 95651 1 C T scaffold1372 ReadM SNP 0025.scaffold00096 95687 1 A G - ScafM SNP 0025.scaffold00096 97098 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 97180 1 A C scaffold1372 ScafM SNP 0025.scaffold00096 97243 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 97362 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 97372 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 97395 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 97576 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 97660 4 .... TTTA scaffold1372 ScafM SNP 0025.scaffold00096 97698 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 97846 1 G A - ReadM SNP 0025.scaffold00096 97944 1 A T - ReadM SNP 0025.scaffold00096 97994 1 T G - ReadM SNP 0025.scaffold00096 98008 1 T C - ReadM SNP 0025.scaffold00096 98103 1 C G - ReadM SNP 0025.scaffold00096 98312 1 T C - ReadM SNP 0025.scaffold00096 98370 1 C T - ReadM SNP 0025.scaffold00096 98492 1 A T - ReadM SNP 0025.scaffold00096 98575 1 G A - ReadM SNP 0025.scaffold00096 98588 1 C T - ReadM SNP 0025.scaffold00096 98748 1 G A - ReadM SNP 0025.scaffold00096 98756 1 T C - Both SNP 0025.scaffold00096 98883 1 C G scaffold1372 Both SNP 0025.scaffold00096 98977 1 G C scaffold1372 Both SNP 0025.scaffold00096 99067 1 G A scaffold1372 Both SNP 0025.scaffold00096 99104 1 T C scaffold1372 Both SNP 0025.scaffold00096 99133 1 G A scaffold1372 Both SNP 0025.scaffold00096 99149 1 T C scaffold1372 Both SNP 0025.scaffold00096 99244 2 CG TA scaffold1372 ScafM INDEL 0025.scaffold00096 99308 24 ........................ GAGTTGCACCGAGGGTGTCCGAGG scaffold1372 ScafM SNP 0025.scaffold00096 99328 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 99341 1 G A scaffold1372 Both SNP 0025.scaffold00096 99368 1 G T scaffold1372 ScafM INDEL 0025.scaffold00096 99401 25 ......................... CGAGAGGGGCAGCCCCGAGGGTGTC scaffold1372 Both SNP 0025.scaffold00096 99417 1 G A scaffold1372 Both SNP 0025.scaffold00096 99431 1 A G scaffold1372 Both SNP 0025.scaffold00096 99480 1 G A scaffold1372 ReadM SNP 0025.scaffold00096 99556 1 T C - ReadM SNP 0025.scaffold00096 99647 1 T C - ReadM SNP 0025.scaffold00096 99671 1 C G - ReadM SNP 0025.scaffold00096 99690 1 A T - ReadM INDEL 0025.scaffold00096 99698 1 . A - ReadM SNP 0025.scaffold00096 99833 1 C T - ReadM SNP 0025.scaffold00096 99920 1 G A - ReadM SNP 0025.scaffold00096 99969 1 G A - ReadM SNP 0025.scaffold00096 100022 1 A G - ReadM SNP 0025.scaffold00096 100040 1 T C - ReadM SNP 0025.scaffold00096 100056 1 A G - ReadM SNP 0025.scaffold00096 100090 1 T G - ReadM SNP 0025.scaffold00096 100134 1 C A - ReadM SNP 0025.scaffold00096 100173 1 A C - ReadM SNP 0025.scaffold00096 100177 1 C T - ReadM SNP 0025.scaffold00096 100194 1 A G - ReadM SNP 0025.scaffold00096 100253 1 T C - ReadM SNP 0025.scaffold00096 100323 1 C T - ReadM SNP 0025.scaffold00096 100436 1 G C - ReadM SNP 0025.scaffold00096 100542 1 T A - ReadM SNP 0025.scaffold00096 100602 1 A C - ReadM SNP 0025.scaffold00096 100723 1 G T - ReadM SNP 0025.scaffold00096 100862 1 T A - ReadM SNP 0025.scaffold00096 100894 1 G T - ReadM SNP 0025.scaffold00096 100911 1 A C - ReadM SNP 0025.scaffold00096 100960 1 C T - ReadM SNP 0025.scaffold00096 100972 1 T C - Both SNP 0025.scaffold00096 101016 1 C T scaffold1372 Both SNP 0025.scaffold00096 101213 1 T A scaffold1372 ReadM SNP 0025.scaffold00096 101256 1 T C - ReadM SNP 0025.scaffold00096 101379 1 T A - ReadM SNP 0025.scaffold00096 101558 1 C T - ReadM SNP 0025.scaffold00096 101579 1 G A - ReadM SNP 0025.scaffold00096 101856 1 T A - ScafM INDEL 0025.scaffold00096 102956 1 T . scaffold1372 ScafM SNP 0025.scaffold00096 102965 1 T C scaffold1372 Both SNP 0025.scaffold00096 103019 1 T C scaffold1372 ReadM SNP 0025.scaffold00096 103060 1 C T - ReadM SNP 0025.scaffold00096 103121 1 G A - ReadM SNP 0025.scaffold00096 103412 1 C T - ReadM SNP 0025.scaffold00096 103630 1 C A - ReadM SNP 0025.scaffold00096 103644 1 G A - ReadM SNP 0025.scaffold00096 103853 1 C T - ReadM SNP 0025.scaffold00096 104089 1 T C - ReadM SNP 0025.scaffold00096 104102 1 C G - ReadM SNP 0025.scaffold00096 104114 1 T G - ReadM SNP 0025.scaffold00096 104378 1 A G - ReadM SNP 0025.scaffold00096 104411 1 T A - ReadM SNP 0025.scaffold00096 104489 1 A G - ReadM SNP 0025.scaffold00096 104495 1 A G - ScafM SNP 0025.scaffold00096 104607 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 104617 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 108986 1 G A - ReadM SNP 0025.scaffold00096 109151 1 T A - ReadM SNP 0025.scaffold00096 109447 1 A G - ReadM SNP 0025.scaffold00096 109640 1 T G - ReadM INDEL 0025.scaffold00096 109651 1 A . - ScafM SNP 0025.scaffold00096 110643 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 110697 1 C G scaffold1372 ScafM INDEL 0025.scaffold00096 110722 3 CCT ... scaffold1372 ScafM SNP 0025.scaffold00096 110745 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 110759 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 110767 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 110778 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 110793 1 T G scaffold1372 ScafM SNP 0025.scaffold00096 110812 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 110836 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 110871 7 TAAGTAC ....... scaffold1372 ScafM INDEL 0025.scaffold00096 110880 1 A . scaffold1372 ScafM SNP 0025.scaffold00096 110940 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 110949 1 T A scaffold1372 ScafM SNP 0025.scaffold00096 110995 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 111018 1 T A scaffold1372 ScafM SNP 0025.scaffold00096 111026 1 A G scaffold1372 Both INDEL 0025.scaffold00096 111181 2 AG .. scaffold1372 Both SNP 0025.scaffold00096 111235 1 A C scaffold1372 Both SNP 0025.scaffold00096 111259 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 111401 14 ATTCATCACAGGAA .............. scaffold1372 Both SNP 0025.scaffold00096 111508 1 G A scaffold1372 Both SNP 0025.scaffold00096 111668 1 C T scaffold1372 Both SNP 0025.scaffold00096 111707 1 T G scaffold1372 Both SNP 0025.scaffold00096 111775 1 G T scaffold1372 Both SNP 0025.scaffold00096 111785 1 G T scaffold1372 Both SNP 0025.scaffold00096 111815 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 111861 1 A G scaffold1372 ScafM INDEL 0025.scaffold00096 111863 7 ....... TTTTATG scaffold1372 Both SNP 0025.scaffold00096 112149 1 C T scaffold1372 ScafM INDEL 0025.scaffold00096 112213 4 AGAT .... scaffold1372 Both SNP 0025.scaffold00096 112401 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 112440 1 G T scaffold1372 ScafM SNP 0025.scaffold00096 112450 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 112495 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 112516 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 112521 1 A T scaffold1372 ScafM INDEL 0025.scaffold00096 112539 2 AA .T scaffold1372 ScafM SNP 0025.scaffold00096 112566 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 112578 10 CTACTGTAAG .......... scaffold1372 ScafM SNP 0025.scaffold00096 112626 1 C A scaffold1372 Both SNP 0025.scaffold00096 112683 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 112738 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 112758 1 T C scaffold1372 Both SNP 0025.scaffold00096 113189 1 T A scaffold1372 Both INDEL 0025.scaffold00096 113206 1 T . scaffold1372 ScafM SNP 0025.scaffold00096 113297 1 A C scaffold1372 Both SNP 0025.scaffold00096 113306 1 A G scaffold1372 Both SNP 0025.scaffold00096 113325 1 C T scaffold1372 Both SNP 0025.scaffold00096 113348 1 A C scaffold1372 Both SNP 0025.scaffold00096 113402 1 T G scaffold1372 ScafM INDEL 0025.scaffold00096 113430 8 ........ GATTTCTG scaffold1372 ScafM SNP 0025.scaffold00096 113498 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 113500 1 T G scaffold1372 ScafM INDEL 0025.scaffold00096 113530 1 A . scaffold1372 ScafM SNP 0025.scaffold00096 113539 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 113544 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 113578 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 113580 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 113605 1 G T scaffold1372 ScafM INDEL 0025.scaffold00096 113620 1 G . scaffold1372 ScafM SNP 0025.scaffold00096 113629 1 C G scaffold1372 Both SNP 0025.scaffold00096 113807 1 C A scaffold1372 Both SNP 0025.scaffold00096 113931 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 113969 8 ........ TTATTGTG scaffold1372 ScafM SNP 0025.scaffold00096 113983 1 A T scaffold1372 ScafM INDEL 0025.scaffold00096 113996 5 TTTTT ..... scaffold1372 ScafM INDEL 0025.scaffold00096 114007 2 .G TA scaffold1372 Both SNP 0025.scaffold00096 114271 1 C G scaffold1372 Both SNP 0025.scaffold00096 114387 1 A T scaffold1372 Both SNP 0025.scaffold00096 114403 1 G T scaffold1372 ScafM SNP 0025.scaffold00096 114426 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 114432 1 G T scaffold1372 Both SNP 0025.scaffold00096 114478 1 G C scaffold1372 Both SNP 0025.scaffold00096 114487 1 G A scaffold1372 Both SNP 0025.scaffold00096 114536 1 T C scaffold1372 Both SNP 0025.scaffold00096 114645 1 A G scaffold1372 Both SNP 0025.scaffold00096 114761 1 G A scaffold1372 Both SNP 0025.scaffold00096 114802 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 114819 1 A G scaffold1372 ScafM INDEL 0025.scaffold00096 114823 7 AGTAGAC ....... scaffold1372 Both SNP 0025.scaffold00096 115045 1 A T scaffold1372 Both SNP 0025.scaffold00096 115057 1 T A scaffold1372 ScafM INDEL 0025.scaffold00096 115096 1 A . scaffold1372 ScafM SNP 0025.scaffold00096 115098 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 115101 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 115120 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 115157 1 A T scaffold1372 Both SNP 0025.scaffold00096 115165 1 C T scaffold1372 Both SNP 0025.scaffold00096 115195 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 115287 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 115289 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 115307 29 TTAAGATTGTGGTACATGCTAGATTTCTA ............................. scaffold1372 ScafM INDEL 0025.scaffold00096 115338 5 TGGAA ..... scaffold1372 Both SNP 0025.scaffold00096 115363 1 A G scaffold1372 Both SNP 0025.scaffold00096 115378 1 C T scaffold1372 Both SNP 0025.scaffold00096 115461 1 A T scaffold1372 Both SNP 0025.scaffold00096 115574 1 C T scaffold1372 Both SNP 0025.scaffold00096 115623 1 A G scaffold1372 Both SNP 0025.scaffold00096 115631 1 G A scaffold1372 Both SNP 0025.scaffold00096 115683 1 A T scaffold1372 Both SNP 0025.scaffold00096 115702 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 115792 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 115796 1 T A scaffold1372 ScafM INDEL 0025.scaffold00096 115799 2 AA .. scaffold1372 Both SNP 0025.scaffold00096 115831 1 G T scaffold1372 Both SNP 0025.scaffold00096 115909 1 T G scaffold1372 Both SNP 0025.scaffold00096 115912 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 115968 1 A C scaffold1372 ScafM SNP 0025.scaffold00096 115972 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 115990 2 CG GA scaffold1372 Both SNP 0025.scaffold00096 116038 1 G A scaffold1372 Both SNP 0025.scaffold00096 116107 1 A G scaffold1372 Both SNP 0025.scaffold00096 116171 1 A G scaffold1372 Both SNP 0025.scaffold00096 116188 1 G T scaffold1372 Both SNP 0025.scaffold00096 116237 1 A G scaffold1372 ScafM INDEL 0025.scaffold00096 116322 2 AA .. scaffold1372 ScafM SNP 0025.scaffold00096 116374 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 116376 1 G T scaffold1372 ScafM SNP 0025.scaffold00096 116390 2 TG CA scaffold1372 ScafM SNP 0025.scaffold00096 116400 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 116443 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 116468 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 116504 1 G A scaffold1372 ReadM SNP 0025.scaffold00096 116993 1 A C - ReadM INDEL 0025.scaffold00096 116996 1 . G - ReadM SNP 0025.scaffold00096 117152 1 A T - ReadM SNP 0025.scaffold00096 117196 1 T C - ReadM SNP 0025.scaffold00096 117200 1 C T - ReadM SNP 0025.scaffold00096 117356 1 G A - ReadM SNP 0025.scaffold00096 117392 1 A G - ReadM SNP 0025.scaffold00096 117395 1 C G - ReadM SNP 0025.scaffold00096 117522 1 C T - ReadM SNP 0025.scaffold00096 117673 1 C G - ReadM SNP 0025.scaffold00096 117693 1 T G - ReadM SNP 0025.scaffold00096 117801 1 A G - ReadM SNP 0025.scaffold00096 117812 1 A G - ReadM SNP 0025.scaffold00096 117815 1 G T - ReadM SNP 0025.scaffold00096 118016 1 T G - ReadM SNP 0025.scaffold00096 118273 1 G A - ReadM SNP 0025.scaffold00096 118297 1 A G - ReadM SNP 0025.scaffold00096 118303 1 A C - ReadM INDEL 0025.scaffold00096 118442 2 .. AT - ReadM SNP 0025.scaffold00096 118452 1 G C - ReadM SNP 0025.scaffold00096 118511 1 C T - ReadM SNP 0025.scaffold00096 118566 1 A G - ReadM SNP 0025.scaffold00096 118727 1 G A - Both SNP 0025.scaffold00096 118741 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 118793 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 118796 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 118799 1 T C scaffold1372 ScafM INDEL 0025.scaffold00096 118834 1 . T scaffold1372 ScafM SNP 0025.scaffold00096 118847 1 T C scaffold1372 ScafM INDEL 0025.scaffold00096 118968 3 ... CGT scaffold1372 ScafM SNP 0025.scaffold00096 118970 1 A T scaffold1372 ReadM SNP 0025.scaffold00096 119034 1 C G - ReadM SNP 0025.scaffold00096 119132 1 T C - ReadM SNP 0025.scaffold00096 119142 1 C T - ReadM SNP 0025.scaffold00096 119191 1 A G - ReadM SNP 0025.scaffold00096 119361 1 T C - ReadM SNP 0025.scaffold00096 119396 1 G C - ReadM SNP 0025.scaffold00096 135896 1 C T - ReadM SNP 0025.scaffold00096 135924 1 T A - ReadM SNP 0025.scaffold00096 136075 1 C T - ReadM SNP 0025.scaffold00096 136084 1 C T - ReadM SNP 0025.scaffold00096 136103 1 T C - ReadM SNP 0025.scaffold00096 136202 1 A T - ReadM INDEL 0025.scaffold00096 136239 2 .. AT - ReadM SNP 0025.scaffold00096 136264 1 C A - ReadM SNP 0025.scaffold00096 136300 1 T C - ReadM SNP 0025.scaffold00096 136434 1 A G - ReadM SNP 0025.scaffold00096 136449 1 G A - ReadM SNP 0025.scaffold00096 136518 1 T C - ReadM SNP 0025.scaffold00096 136530 1 G A - ReadM SNP 0025.scaffold00096 136614 1 C T - ReadM SNP 0025.scaffold00096 136623 1 G A - ReadM SNP 0025.scaffold00096 136705 1 G A - ReadM SNP 0025.scaffold00096 136718 1 G A - ReadM SNP 0025.scaffold00096 136725 1 C T - ReadM SNP 0025.scaffold00096 136826 1 A G - ReadM INDEL 0025.scaffold00096 136829 1 . C - ReadM SNP 0025.scaffold00096 136872 1 T C - ReadM SNP 0025.scaffold00096 136929 1 T C - ReadM SNP 0025.scaffold00096 136984 1 A G - ReadM SNP 0025.scaffold00096 136987 1 A G - ReadM INDEL 0025.scaffold00096 137032 1 . C - ReadM SNP 0025.scaffold00096 137067 1 C G - Both SNP 0025.scaffold00096 137316 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 137467 1 A C - ReadM SNP 0025.scaffold00096 137477 1 C T - ReadM SNP 0025.scaffold00096 137529 1 G A - ReadM SNP 0025.scaffold00096 137673 1 T C - ReadM INDEL 0025.scaffold00096 137858 2 .. TG - ReadM SNP 0025.scaffold00096 137871 1 T C - ReadM SNP 0025.scaffold00096 137953 1 T C - ReadM SNP 0025.scaffold00096 137981 1 G A - ReadM SNP 0025.scaffold00096 137994 1 C G - ReadM SNP 0025.scaffold00096 138034 1 C A - ReadM SNP 0025.scaffold00096 138047 1 G A - ReadM SNP 0025.scaffold00096 138097 1 G A - ReadM INDEL 0025.scaffold00096 138130 1 C . - ReadM SNP 0025.scaffold00096 138178 1 T G - ReadM SNP 0025.scaffold00096 138336 1 C G - ReadM SNP 0025.scaffold00096 138407 1 A G - ReadM SNP 0025.scaffold00096 138447 1 G T - ReadM SNP 0025.scaffold00096 138506 1 T C - ReadM SNP 0025.scaffold00096 138661 1 G A - ReadM SNP 0025.scaffold00096 138688 1 T C - ReadM SNP 0025.scaffold00096 138783 1 A G - ReadM SNP 0025.scaffold00096 138940 1 G T - ReadM INDEL 0025.scaffold00096 138983 1 . G - ReadM SNP 0025.scaffold00096 139073 1 T G - ScafM SNP 0025.scaffold00096 139248 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 139266 1 C T scaffold1372 ReadM SNP 0025.scaffold00096 139728 1 A G - ReadM SNP 0025.scaffold00096 139769 1 A G - ReadM SNP 0025.scaffold00096 139911 1 A G - ReadM SNP 0025.scaffold00096 140040 1 C A - ReadM SNP 0025.scaffold00096 140127 1 A G - ReadM SNP 0025.scaffold00096 140176 1 G A - ReadM SNP 0025.scaffold00096 140187 1 C T - ReadM SNP 0025.scaffold00096 140233 1 G C - ReadM SNP 0025.scaffold00096 140395 1 C A - ReadM SNP 0025.scaffold00096 140418 1 T C - ReadM SNP 0025.scaffold00096 140465 1 G A - ReadM SNP 0025.scaffold00096 140864 1 G C - ReadM SNP 0025.scaffold00096 140874 1 C A - ScafM SNP 0025.scaffold00096 140965 1 T A scaffold1372 Both SNP 0025.scaffold00096 141016 1 A G scaffold1372 Both SNP 0025.scaffold00096 141030 1 T C scaffold1372 Both SNP 0025.scaffold00096 141092 1 C T scaffold1372 Both SNP 0025.scaffold00096 141240 1 C T scaffold1372 Both SNP 0025.scaffold00096 141273 1 A G scaffold1372 ScafM INDEL 0025.scaffold00096 141415 2 .. TT scaffold1372 ScafM SNP 0025.scaffold00096 141421 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 141435 1 C T scaffold1372 Both SNP 0025.scaffold00096 141497 1 T G scaffold1372 Both SNP 0025.scaffold00096 141646 1 G A scaffold1372 Both SNP 0025.scaffold00096 141679 1 G A scaffold1372 Both SNP 0025.scaffold00096 141778 1 C T scaffold1372 Both SNP 0025.scaffold00096 141817 1 T C scaffold1372 Both SNP 0025.scaffold00096 141823 1 T G scaffold1372 ScafM SNP 0025.scaffold00096 141863 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 141881 1 C T scaffold1372 ScafM SNP 0025.scaffold00096 141897 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 141901 1 G T scaffold1372 Both SNP 0025.scaffold00096 141941 1 A G scaffold1372 Both SNP 0025.scaffold00096 141955 1 G A scaffold1372 Both SNP 0025.scaffold00096 142010 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 142054 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 142059 1 T G scaffold1372 ReadM SNP 0025.scaffold00096 142096 1 T C - ReadM SNP 0025.scaffold00096 142104 1 T G - ReadM SNP 0025.scaffold00096 142126 1 T C - ReadM SNP 0025.scaffold00096 142262 1 C T - ReadM SNP 0025.scaffold00096 142357 1 G C - ReadM SNP 0025.scaffold00096 142409 1 C T - ReadM SNP 0025.scaffold00096 142467 1 A G - ReadM SNP 0025.scaffold00096 142554 1 T C - ReadM SNP 0025.scaffold00096 142602 1 C T - ReadM SNP 0025.scaffold00096 142609 1 T C - ReadM SNP 0025.scaffold00096 142676 1 C T - ReadM SNP 0025.scaffold00096 142720 1 G C - ReadM SNP 0025.scaffold00096 142728 1 G A - ReadM SNP 0025.scaffold00096 142735 1 T C - ReadM SNP 0025.scaffold00096 142875 1 T C - ReadM SNP 0025.scaffold00096 143001 1 T A - ReadM SNP 0025.scaffold00096 143065 1 C T - ReadM SNP 0025.scaffold00096 143088 1 C A - ReadM SNP 0025.scaffold00096 143092 1 T C - ReadM SNP 0025.scaffold00096 143147 1 A T - ReadM SNP 0025.scaffold00096 143234 1 A G - ReadM INDEL 0025.scaffold00096 143321 2 TA .. - ReadM SNP 0025.scaffold00096 143364 1 T G - ReadM INDEL 0025.scaffold00096 143369 1 . T - ReadM SNP 0025.scaffold00096 143407 1 C T - ReadM SNP 0025.scaffold00096 143483 1 T C - ReadM SNP 0025.scaffold00096 143547 1 T C - ReadM SNP 0025.scaffold00096 143555 1 A T - ReadM SNP 0025.scaffold00096 143568 1 A G - ReadM SNP 0025.scaffold00096 143683 1 C T - ReadM SNP 0025.scaffold00096 143729 1 T A - ReadM SNP 0025.scaffold00096 143852 1 G A - ReadM SNP 0025.scaffold00096 143869 1 T C - ReadM SNP 0025.scaffold00096 144125 1 C T - ReadM SNP 0025.scaffold00096 144134 1 T C - ReadM SNP 0025.scaffold00096 144143 1 A G - ReadM SNP 0025.scaffold00096 144191 1 A G - ReadM SNP 0025.scaffold00096 144220 1 G A - ReadM SNP 0025.scaffold00096 144225 1 T G - ReadM SNP 0025.scaffold00096 144266 1 A T - ReadM SNP 0025.scaffold00096 144369 1 G A - ReadM SNP 0025.scaffold00096 144393 1 G A - ReadM SNP 0025.scaffold00096 144421 1 A C - ReadM SNP 0025.scaffold00096 144453 1 G A - ReadM SNP 0025.scaffold00096 144631 1 A C - ReadM SNP 0025.scaffold00096 144879 1 G A - ReadM SNP 0025.scaffold00096 144883 1 T A - ReadM SNP 0025.scaffold00096 144995 1 A G - ReadM SNP 0025.scaffold00096 145022 1 A G - ReadM SNP 0025.scaffold00096 145122 1 G T - ReadM SNP 0025.scaffold00096 145136 1 C G - ReadM SNP 0025.scaffold00096 145215 1 G T - ReadM SNP 0025.scaffold00096 145281 1 C T - ReadM SNP 0025.scaffold00096 145369 1 T C - ReadM SNP 0025.scaffold00096 145443 1 C A - ReadM SNP 0025.scaffold00096 145540 1 G A - ReadM SNP 0025.scaffold00096 145726 1 A T - ReadM SNP 0025.scaffold00096 145730 1 A G - ReadM SNP 0025.scaffold00096 145738 1 C T - ReadM SNP 0025.scaffold00096 145806 1 T G - ReadM SNP 0025.scaffold00096 145900 1 C A - ReadM SNP 0025.scaffold00096 145916 1 G A - ReadM SNP 0025.scaffold00096 145938 1 C A - ReadM SNP 0025.scaffold00096 145971 1 C T - ReadM SNP 0025.scaffold00096 146041 1 A G - ReadM SNP 0025.scaffold00096 146257 1 C T - ReadM SNP 0025.scaffold00096 146635 1 T C - ReadM SNP 0025.scaffold00096 146764 1 T C - ReadM SNP 0025.scaffold00096 146774 1 C T - ReadM SNP 0025.scaffold00096 146873 1 G T - ReadM SNP 0025.scaffold00096 146896 1 G A - ReadM SNP 0025.scaffold00096 146937 1 T G - ReadM SNP 0025.scaffold00096 147046 1 C G - ReadM SNP 0025.scaffold00096 147059 1 G A - ScafM SNP 0025.scaffold00096 148053 1 T A scaffold1372 ScafM SNP 0025.scaffold00096 148150 1 A T scaffold1372 ScafM INDEL 0025.scaffold00096 148238 76 ............................................................................ AAATTCATTATGGATAGTTTAAGGTAGAATTGTTAATAATCTACAAGTTTTGTGGCGCATGGTTCAAGTATGACTT scaffold1372 ScafM SNP 0025.scaffold00096 148349 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 148360 1 T G scaffold1372 ScafM SNP 0025.scaffold00096 148661 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 148689 1 A C scaffold1372 Both SNP 0025.scaffold00096 148745 1 T G scaffold1372 ScafM SNP 0025.scaffold00096 148832 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 148849 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 148859 1 A C scaffold1372 ScafM SNP 0025.scaffold00096 148888 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 148940 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 149119 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 149147 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 149246 1 G T scaffold1372 ScafM SNP 0025.scaffold00096 149248 1 G T scaffold1372 ScafM SNP 0025.scaffold00096 149716 1 G A scaffold1372 ScafM INDEL 0025.scaffold00096 149840 5 ..... AGAAT scaffold1372 ScafM SNP 0025.scaffold00096 149855 1 C T scaffold1372 ReadM SNP 0025.scaffold00096 150122 1 G A - ReadM INDEL 0025.scaffold00096 150202 1 A . - Both SNP 0025.scaffold00096 150242 1 T A scaffold1372 Both SNP 0025.scaffold00096 150313 1 T A scaffold1372 Both SNP 0025.scaffold00096 150355 1 T C scaffold1372 ReadM SNP 0025.scaffold00096 150400 1 A G - ReadM SNP 0025.scaffold00096 150437 1 T C - ReadM SNP 0025.scaffold00096 150455 1 C G - Both SNP 0025.scaffold00096 150514 1 C T scaffold1372 Both SNP 0025.scaffold00096 150562 1 A G scaffold1372 ScafM SNP 0025.scaffold00096 150603 1 G T scaffold1372 Both SNP 0025.scaffold00096 150625 1 G T scaffold1372 Both SNP 0025.scaffold00096 150632 1 G A scaffold1372 Both SNP 0025.scaffold00096 150719 1 T G scaffold1372 Both INDEL 0025.scaffold00096 150729 1 . T scaffold1372 ScafM SNP 0025.scaffold00096 150731 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 150938 1 C A - ReadM INDEL 0025.scaffold00096 150950 1 C . - ReadM SNP 0025.scaffold00096 150956 1 C A - ReadM SNP 0025.scaffold00096 151096 1 G A - ReadM SNP 0025.scaffold00096 151286 1 G A - ReadM SNP 0025.scaffold00096 151374 1 T C - ReadM SNP 0025.scaffold00096 151382 1 G C - ScafM SNP 0025.scaffold00096 153791 1 A T scaffold1372 ScafM SNP 0025.scaffold00096 153797 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 153832 1 A T scaffold1372 Both SNP 0025.scaffold00096 153876 1 C T scaffold1372 Both SNP 0025.scaffold00096 154018 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 154103 1 C G scaffold1372 ScafM SNP 0025.scaffold00096 154109 1 T C scaffold1372 ScafM SNP 0025.scaffold00096 154168 1 T G scaffold1372 ScafM SNP 0025.scaffold00096 154173 1 C T scaffold1372 ScafM INDEL 0025.scaffold00096 154190 3 CAG ... scaffold1372 ScafM INDEL 0025.scaffold00096 154263 2 GT .C scaffold1372 ScafM SNP 0025.scaffold00096 154272 1 G T scaffold1372 ReadM SNP 0025.scaffold00096 154517 1 T C - ReadM SNP 0025.scaffold00096 154559 1 G A - ReadM SNP 0025.scaffold00096 154752 1 T G - ReadM SNP 0025.scaffold00096 154765 1 A C - ReadM SNP 0025.scaffold00096 154788 1 T G - ReadM SNP 0025.scaffold00096 154857 1 G A - ReadM SNP 0025.scaffold00096 154866 1 C T - ReadM SNP 0025.scaffold00096 154941 1 G T - ReadM SNP 0025.scaffold00096 154971 1 A C - ReadM SNP 0025.scaffold00096 154980 1 G C - ReadM SNP 0025.scaffold00096 155007 1 A G - ReadM SNP 0025.scaffold00096 155070 2 GT AC - ReadM SNP 0025.scaffold00096 155208 1 G A - ReadM SNP 0025.scaffold00096 155252 1 T C - ReadM SNP 0025.scaffold00096 155391 1 A G - ReadM SNP 0025.scaffold00096 155427 1 C T - ReadM SNP 0025.scaffold00096 155487 1 A C - ReadM SNP 0025.scaffold00096 155564 1 A G - ReadM SNP 0025.scaffold00096 155569 1 C T - ReadM SNP 0025.scaffold00096 155666 1 A G - ReadM SNP 0025.scaffold00096 155681 1 G T - ReadM SNP 0025.scaffold00096 155696 1 C T - ReadM SNP 0025.scaffold00096 155820 1 C T - ReadM SNP 0025.scaffold00096 155843 1 G T - ReadM SNP 0025.scaffold00096 155867 1 C T - ReadM SNP 0025.scaffold00096 155975 1 A G - ReadM SNP 0025.scaffold00096 156038 1 A G - ReadM SNP 0025.scaffold00096 156055 1 A C - ReadM SNP 0025.scaffold00096 156116 1 A G - ReadM SNP 0025.scaffold00096 156167 1 G C - ReadM SNP 0025.scaffold00096 156238 1 G T - ReadM SNP 0025.scaffold00096 156259 1 C T - ReadM SNP 0025.scaffold00096 156266 1 T G - ReadM INDEL 0025.scaffold00096 156313 1 . G - ReadM SNP 0025.scaffold00096 156351 1 C A - ReadM SNP 0025.scaffold00096 156383 1 A G - ReadM SNP 0025.scaffold00096 156559 1 C A - ReadM SNP 0025.scaffold00096 156612 1 T G - ReadM INDEL 0025.scaffold00096 156645 1 . A - ReadM SNP 0025.scaffold00096 156785 1 G T - ReadM INDEL 0025.scaffold00096 156886 1 . G - ReadM SNP 0025.scaffold00096 156916 1 C A - ReadM INDEL 0025.scaffold00096 156964 1 T . - ReadM SNP 0025.scaffold00096 157000 1 T C - ReadM SNP 0025.scaffold00096 157047 1 A G - ReadM SNP 0025.scaffold00096 157062 1 C A - ReadM SNP 0025.scaffold00096 157170 1 A G - ReadM SNP 0025.scaffold00096 157174 1 G A - ReadM SNP 0025.scaffold00096 157229 1 C A - ReadM SNP 0025.scaffold00096 157310 1 T C - ReadM SNP 0025.scaffold00096 157523 1 G T - ReadM SNP 0025.scaffold00096 157533 1 G C - ReadM SNP 0025.scaffold00096 157542 1 G A - ReadM SNP 0025.scaffold00096 157619 1 C T - ReadM SNP 0025.scaffold00096 157708 1 C T - ReadM SNP 0025.scaffold00096 157713 1 A C - ReadM SNP 0025.scaffold00096 157760 1 T G - ReadM SNP 0025.scaffold00096 157780 1 G T - ReadM SNP 0025.scaffold00096 157815 1 G C - ReadM SNP 0025.scaffold00096 157921 1 T G - ReadM SNP 0025.scaffold00096 157994 1 C T - ReadM SNP 0025.scaffold00096 158019 1 G A - ReadM SNP 0025.scaffold00096 158034 1 C T - ReadM SNP 0025.scaffold00096 158056 1 G A - ReadM INDEL 0025.scaffold00096 158149 1 . A - ReadM SNP 0025.scaffold00096 158160 1 T G - ReadM SNP 0025.scaffold00096 158203 1 G C - ReadM SNP 0025.scaffold00096 158276 1 C T - ReadM SNP 0025.scaffold00096 158295 1 A G - ReadM SNP 0025.scaffold00096 158303 1 G A - ReadM SNP 0025.scaffold00096 158383 1 T G - ReadM SNP 0025.scaffold00096 158472 1 G C - ReadM SNP 0025.scaffold00096 158528 1 T C - ReadM SNP 0025.scaffold00096 158588 1 C G - ReadM SNP 0025.scaffold00096 158662 1 C T - ReadM SNP 0025.scaffold00096 158666 1 T C - ReadM SNP 0025.scaffold00096 158681 1 T A - ReadM SNP 0025.scaffold00096 158712 1 C G - ReadM SNP 0025.scaffold00096 158786 1 G A - ReadM SNP 0025.scaffold00096 158844 1 C A - ReadM SNP 0025.scaffold00096 158867 1 A G - ReadM SNP 0025.scaffold00096 158906 1 T C - ReadM SNP 0025.scaffold00096 158942 1 T C - ReadM SNP 0025.scaffold00096 159029 1 G A - ReadM SNP 0025.scaffold00096 159089 1 A C - Both SNP 0025.scaffold00096 159152 1 T G scaffold1372 Both SNP 0025.scaffold00096 159163 1 T C scaffold1372 Both SNP 0025.scaffold00096 159333 1 C T scaffold1372 Both INDEL 0025.scaffold00096 159404 1 T . scaffold1372 Both SNP 0025.scaffold00096 159477 1 C T scaffold1372 Both SNP 0025.scaffold00096 159479 1 A G scaffold1372 Both SNP 0025.scaffold00096 159530 1 A G scaffold1372 Both SNP 0025.scaffold00096 159590 1 G C scaffold1372 ReadM SNP 0025.scaffold00096 159689 1 G A - ReadM SNP 0025.scaffold00096 159754 1 C T - ReadM SNP 0025.scaffold00096 159756 1 A G - ReadM SNP 0025.scaffold00096 159793 1 T C - ReadM SNP 0025.scaffold00096 159837 1 A G - ScafM SNP 0025.scaffold00096 160474 1 G C scaffold1372 ScafM INDEL 0025.scaffold00096 160481 3 TTT ... scaffold1372 ScafM SNP 0025.scaffold00096 160516 1 T C scaffold1372 Both SNP 0025.scaffold00096 160570 1 T C scaffold1372 Both SNP 0025.scaffold00096 160612 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 160647 1 C A scaffold1372 ScafM SNP 0025.scaffold00096 160675 1 G A scaffold11927 ScafM SNP 0025.scaffold00096 160688 1 G T scaffold11927 ScafM SNP 0025.scaffold00096 160709 1 T C scaffold11927 ScafM SNP 0025.scaffold00096 160732 1 C T scaffold11927 ScafM SNP 0025.scaffold00096 160808 1 A C scaffold11927 ScafM SNP 0025.scaffold00096 160815 1 A C scaffold11927 ScafM INDEL 0025.scaffold00096 160862 1 . A scaffold11927 ScafM SNP 0025.scaffold00096 160883 1 G T scaffold11927 ScafM SNP 0025.scaffold00096 160898 1 T C scaffold11927 ScafM INDEL 0025.scaffold00096 160920 31 AAAATCTCGCACCACTCATTCCCTCAAAAAA ............................... scaffold11927 ScafM SNP 0025.scaffold00096 161023 1 T A scaffold11927 ScafM SNP 0025.scaffold00096 161026 1 T A scaffold11927 ScafM SNP 0025.scaffold00096 161040 1 A T scaffold11927 ScafM SNP 0025.scaffold00096 161064 1 T C scaffold11927 ScafM SNP 0025.scaffold00096 161078 1 G A scaffold11927 ScafM SNP 0025.scaffold00096 161085 1 T G scaffold11927 ScafM SNP 0025.scaffold00096 161112 1 G A scaffold11927 ScafM SNP 0025.scaffold00096 161114 1 T A scaffold11927 ScafM SNP 0025.scaffold00096 161122 1 C G scaffold11927 ScafM SNP 0025.scaffold00096 161141 1 A C scaffold11927 ScafM SNP 0025.scaffold00096 161159 1 A C scaffold11927 ScafM SNP 0025.scaffold00096 161162 1 C G scaffold11927 ScafM SNP 0025.scaffold00096 161186 1 G A scaffold11927 ScafM INDEL 0025.scaffold00096 161270 1 . A scaffold11927 ReadM SNP 0025.scaffold00096 161271 1 T A - ScafM INDEL 0025.scaffold00096 161271 1 . A scaffold11927 ScafM INDEL 0025.scaffold00096 161276 2 .. AC scaffold11927 ScafM SNP 0025.scaffold00096 161340 1 A T scaffold11927 ScafM SNP 0025.scaffold00096 161414 1 C T scaffold11927 ScafM SNP 0025.scaffold00096 161437 2 AA TT scaffold11927 ScafM SNP 0025.scaffold00096 161470 1 T C scaffold11927 ScafM SNP 0025.scaffold00096 161526 1 A G scaffold11927 ScafM SNP 0025.scaffold00096 161550 1 T G scaffold11927 ScafM SNP 0025.scaffold00096 161563 1 T C scaffold11927 ScafM SNP 0025.scaffold00096 161565 1 C A scaffold11927 ScafM SNP 0025.scaffold00096 161568 1 T G scaffold11927 ScafM SNP 0025.scaffold00096 161650 1 G A scaffold11927 ScafM SNP 0025.scaffold00096 161670 1 T C scaffold11927 ScafM SNP 0025.scaffold00096 161701 1 G A scaffold11927 ScafM INDEL 0025.scaffold00096 161773 1 T . scaffold11927 ScafM SNP 0025.scaffold00096 161797 1 A C scaffold11927 ScafM SNP 0025.scaffold00096 161801 1 T C scaffold11927 ReadM SNP 0025.scaffold00096 162393 1 A C - ReadM SNP 0025.scaffold00096 162423 1 C A - ScafM SNP 0025.scaffold00096 163508 1 C T scaffold378 ScafM SNP 0025.scaffold00096 163524 1 C T scaffold378 ScafM SNP 0025.scaffold00096 163527 1 A G scaffold378 ScafM SNP 0025.scaffold00096 163537 1 A G scaffold378 ScafM SNP 0025.scaffold00096 163585 1 T A scaffold378 ScafM INDEL 0025.scaffold00096 163751 5 ..... AATAT scaffold378 ScafM SNP 0025.scaffold00096 163815 1 T A scaffold378 ScafM SNP 0025.scaffold00096 163817 1 T C scaffold378 ScafM SNP 0025.scaffold00096 163896 1 G A scaffold378 ScafM SNP 0025.scaffold00096 163914 1 T C scaffold378 ScafM SNP 0025.scaffold00096 163927 2 GC AT scaffold378 ScafM INDEL 0025.scaffold00096 163982 3 TAA ... scaffold378 ScafM SNP 0025.scaffold00096 164033 1 A G scaffold378 ScafM SNP 0025.scaffold00096 164046 1 A G scaffold378 ScafM SNP 0025.scaffold00096 164050 1 T C scaffold378 ScafM SNP 0025.scaffold00096 164064 1 G C scaffold378 ReadM SNP 0025.scaffold00096 164520 1 G T - ReadM SNP 0025.scaffold00096 164534 1 C T - ReadM SNP 0025.scaffold00096 164720 1 C G - ReadM SNP 0025.scaffold00096 164777 1 G A - ReadM SNP 0025.scaffold00096 164850 1 T G - ReadM SNP 0025.scaffold00096 165417 1 G A - ReadM SNP 0025.scaffold00096 165426 1 G A - ReadM SNP 0025.scaffold00096 165459 1 A G - ReadM SNP 0025.scaffold00096 165542 1 T A - ReadM SNP 0025.scaffold00096 165616 1 T C - Both INDEL 0025.scaffold00096 165700 1 . T scaffold1372 ReadM SNP 0025.scaffold00096 165969 1 T C - ReadM SNP 0025.scaffold00096 165996 1 T G - ReadM SNP 0025.scaffold00096 166038 1 C T - ReadM SNP 0025.scaffold00096 166072 1 A T - ReadM SNP 0025.scaffold00096 166124 1 A G - ReadM SNP 0025.scaffold00096 166229 1 T A - ReadM SNP 0025.scaffold00096 166276 1 T A - ReadM SNP 0025.scaffold00096 166340 1 C A - ReadM SNP 0025.scaffold00096 166456 2 AA GG - ReadM SNP 0025.scaffold00096 166489 1 A G - ReadM SNP 0025.scaffold00096 166576 1 C G - ReadM SNP 0025.scaffold00096 166632 1 A G - ReadM SNP 0025.scaffold00096 166663 1 T C - ReadM SNP 0025.scaffold00096 166704 1 C T - ReadM SNP 0025.scaffold00096 166782 1 A G - ReadM SNP 0025.scaffold00096 166872 1 C G - ReadM SNP 0025.scaffold00096 166932 1 T A - ReadM SNP 0025.scaffold00096 167019 1 G A - ReadM SNP 0025.scaffold00096 167039 1 G T - ReadM INDEL 0025.scaffold00096 167150 1 A . - ReadM SNP 0025.scaffold00096 167173 1 G T - ReadM SNP 0025.scaffold00096 167195 1 C T - ReadM SNP 0025.scaffold00096 167341 1 G T - ReadM SNP 0025.scaffold00096 167346 1 G A - ReadM SNP 0025.scaffold00096 167388 1 C T - ReadM SNP 0025.scaffold00096 167453 1 T C - ReadM SNP 0025.scaffold00096 167565 1 T C - ReadM SNP 0025.scaffold00096 167586 1 G A - ReadM SNP 0025.scaffold00096 167593 1 C T - ReadM SNP 0025.scaffold00096 167618 1 A C - ReadM SNP 0025.scaffold00096 167721 1 A G - ReadM SNP 0025.scaffold00096 167727 1 T C - ReadM SNP 0025.scaffold00096 167902 1 G C - ReadM SNP 0025.scaffold00096 167968 1 T A - ReadM SNP 0025.scaffold00096 168007 1 G A - ReadM SNP 0025.scaffold00096 168146 1 G T - ReadM SNP 0025.scaffold00096 168188 1 A T - ReadM SNP 0025.scaffold00096 168260 1 C T - ReadM SNP 0025.scaffold00096 168268 1 C T - ReadM SNP 0025.scaffold00096 168774 1 A G - ReadM SNP 0025.scaffold00096 168864 1 A T - ReadM SNP 0025.scaffold00096 168924 1 A G - ReadM SNP 0025.scaffold00096 168978 1 G A - ReadM SNP 0025.scaffold00096 169053 1 C T - ReadM SNP 0025.scaffold00096 169149 1 G A - ReadM SNP 0025.scaffold00096 169176 1 G C - ReadM SNP 0025.scaffold00096 169180 1 G A - ReadM SNP 0025.scaffold00096 169306 1 T G - ReadM SNP 0025.scaffold00096 169370 1 C T - ReadM SNP 0025.scaffold00096 169410 1 A G - ReadM SNP 0025.scaffold00096 169684 1 C G - ReadM SNP 0025.scaffold00096 169730 1 G A - ReadM SNP 0025.scaffold00096 169768 1 G A - ReadM SNP 0025.scaffold00096 169879 1 A G - ReadM SNP 0025.scaffold00096 169911 1 G A - ReadM SNP 0025.scaffold00096 169953 1 C T - ReadM SNP 0025.scaffold00096 170134 1 T C - ReadM SNP 0025.scaffold00096 170142 1 T A - ReadM SNP 0025.scaffold00096 170230 1 T G - ReadM SNP 0025.scaffold00096 170250 1 T G - ReadM SNP 0025.scaffold00096 170288 1 G A - ReadM SNP 0025.scaffold00096 171169 1 A G - ReadM SNP 0025.scaffold00096 171199 1 G T - ReadM SNP 0025.scaffold00096 171444 1 T A - ReadM SNP 0025.scaffold00096 171468 1 T A - ReadM SNP 0025.scaffold00096 171575 1 C G - ReadM INDEL 0025.scaffold00096 171634 1 T . - ReadM SNP 0025.scaffold00096 171648 1 C A - Both SNP 0025.scaffold00096 171812 1 T C scaffold1372 ReadM SNP 0025.scaffold00096 171889 1 T G - ReadM SNP 0025.scaffold00096 172012 1 C A - ReadM SNP 0025.scaffold00096 172045 1 A C - ReadM SNP 0025.scaffold00096 172097 1 C A - ReadM SNP 0025.scaffold00096 172108 1 A C - ReadM SNP 0025.scaffold00096 172362 1 A G - ReadM SNP 0025.scaffold00096 172378 1 T C - ReadM SNP 0025.scaffold00096 172393 1 C G - ReadM SNP 0025.scaffold00096 172497 1 T C - ReadM SNP 0025.scaffold00096 172648 1 A G - Both SNP 0025.scaffold00096 172778 1 G A scaffold1372 Both SNP 0025.scaffold00096 172792 1 G A scaffold1372 Both SNP 0025.scaffold00096 172809 1 T A scaffold1372 Both SNP 0025.scaffold00096 172838 1 A T scaffold1372 Both SNP 0025.scaffold00096 172965 1 C T scaffold1372 Both SNP 0025.scaffold00096 172993 1 A C scaffold1372 Both SNP 0025.scaffold00096 173019 1 C G scaffold1372 ReadM SNP 0025.scaffold00096 173354 1 T C - ReadM SNP 0025.scaffold00096 173489 1 C T - Both SNP 0025.scaffold00096 173539 1 C T scaffold1372 ReadM SNP 0025.scaffold00096 173609 1 A T - ReadM SNP 0025.scaffold00096 173625 1 A G - ReadM SNP 0025.scaffold00096 173661 1 A T - ReadM SNP 0025.scaffold00096 173678 1 G T - ReadM SNP 0025.scaffold00096 173686 1 T C - Both SNP 0025.scaffold00096 173909 1 G A scaffold1372 Both SNP 0025.scaffold00096 173931 1 T C scaffold1372 ScafM INDEL 0025.scaffold00096 173960 3 ... TTT scaffold1372 ScafM SNP 0025.scaffold00096 173977 1 A C scaffold1372 ScafM SNP 0025.scaffold00096 173992 1 A G scaffold1372 Both SNP 0025.scaffold00096 174115 1 A C scaffold1372 Both SNP 0025.scaffold00096 174147 1 G A scaffold1372 Both SNP 0025.scaffold00096 174194 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 174268 1 C G - ReadM SNP 0025.scaffold00096 174276 1 A G - ReadM SNP 0025.scaffold00096 174306 1 C T - ReadM SNP 0025.scaffold00096 174315 1 A C - ReadM SNP 0025.scaffold00096 174442 1 C T - ReadM SNP 0025.scaffold00096 174476 1 A C - ReadM SNP 0025.scaffold00096 174514 1 T C - ReadM SNP 0025.scaffold00096 174545 1 G A - ReadM SNP 0025.scaffold00096 174559 1 C G - ReadM SNP 0025.scaffold00096 174723 1 A C - ReadM SNP 0025.scaffold00096 174731 1 C T - ReadM SNP 0025.scaffold00096 174745 1 G A - ReadM SNP 0025.scaffold00096 174786 1 A G - ReadM SNP 0025.scaffold00096 174824 1 C T - ReadM SNP 0025.scaffold00096 174833 1 C A - ReadM SNP 0025.scaffold00096 174991 1 A G - ReadM SNP 0025.scaffold00096 175058 1 A G - ReadM SNP 0025.scaffold00096 175121 1 C A - ReadM SNP 0025.scaffold00096 175130 1 C A - ReadM SNP 0025.scaffold00096 175254 1 T A - ReadM SNP 0025.scaffold00096 175305 1 T A - ReadM SNP 0025.scaffold00096 175318 1 A C - Both INDEL 0025.scaffold00096 175403 2 .. TT scaffold1372 Both SNP 0025.scaffold00096 175486 1 A G scaffold1372 ReadM SNP 0025.scaffold00096 175582 1 T C - ReadM SNP 0025.scaffold00096 175651 1 T C - ReadM SNP 0025.scaffold00096 175656 1 C T - ScafM SNP 0025.scaffold00096 175702 1 G C scaffold1372 ScafM SNP 0025.scaffold00096 175714 2 CT TC scaffold1372 ScafM SNP 0025.scaffold00096 175718 1 G A scaffold1372 Both SNP 0025.scaffold00096 175780 1 A C scaffold1372 ScafM SNP 0025.scaffold00096 175789 1 G A scaffold1372 ScafM SNP 0025.scaffold00096 175791 1 A G scaffold1372 Both SNP 0025.scaffold00096 175836 1 A G scaffold1372 Both INDEL 0025.scaffold00096 175869 1 G . scaffold1372 Both SNP 0025.scaffold00096 175886 1 A T scaffold1372 ReadM SNP 0025.scaffold00096 176145 1 A C - ReadM SNP 0025.scaffold00096 176211 1 T C - ReadM SNP 0025.scaffold00096 176285 1 A G - ReadM SNP 0025.scaffold00096 177315 1 A T - ReadM INDEL 0025.scaffold00096 177366 1 . C - ReadM SNP 0025.scaffold00096 177527 1 T G - ReadM SNP 0025.scaffold00096 177534 1 C T - ReadM SNP 0025.scaffold00096 177640 1 T C - ReadM SNP 0025.scaffold00096 177682 1 T G - ReadM SNP 0025.scaffold00096 177914 1 T C - ReadM SNP 0025.scaffold00096 178063 1 A C - ReadM SNP 0025.scaffold00096 178075 1 C T - ReadM INDEL 0025.scaffold00096 178093 1 . T - ReadM SNP 0025.scaffold00096 178142 1 T C - ReadM SNP 0025.scaffold00096 178226 1 A T - ReadM SNP 0025.scaffold00096 178301 1 T A - ReadM SNP 0025.scaffold00096 178316 1 A C - ReadM SNP 0025.scaffold00096 178328 1 A C - ReadM SNP 0025.scaffold00096 178421 1 A G - ReadM SNP 0025.scaffold00096 178456 1 C A - ReadM SNP 0025.scaffold00096 178504 1 A G - ReadM SNP 0025.scaffold00096 178726 1 G T - ReadM SNP 0025.scaffold00096 178734 1 G T - ReadM SNP 0025.scaffold00096 178742 1 G A - ReadM SNP 0025.scaffold00096 178842 1 A C - ReadM SNP 0025.scaffold00096 178884 1 G C - ReadM SNP 0025.scaffold00096 179001 1 T C - ReadM SNP 0025.scaffold00096 179272 1 C T - ReadM SNP 0025.scaffold00096 179275 1 T A - ReadM SNP 0025.scaffold00096 179349 1 C A - ReadM SNP 0025.scaffold00096 179397 1 C G - ReadM SNP 0025.scaffold00096 179405 1 T A - ReadM SNP 0025.scaffold00096 179465 1 T C - ReadM SNP 0025.scaffold00096 179528 1 G A - ReadM SNP 0025.scaffold00096 179563 1 C T - ReadM SNP 0025.scaffold00096 179643 1 T G - ReadM INDEL 0025.scaffold00096 179664 1 A . - ReadM SNP 0025.scaffold00096 179706 1 C G - ReadM SNP 0025.scaffold00096 179850 1 G A - ReadM SNP 0025.scaffold00096 180060 1 A G - ReadM SNP 0025.scaffold00096 180079 1 A G - ReadM SNP 0025.scaffold00096 180088 1 T G - ReadM SNP 0025.scaffold00096 180093 1 T G - ReadM SNP 0025.scaffold00096 180191 1 A T - ReadM SNP 0025.scaffold00096 180214 1 C T - ReadM SNP 0025.scaffold00096 180440 1 T G - ReadM SNP 0025.scaffold00096 180562 1 T C - ReadM SNP 0025.scaffold00096 180576 1 C T - ReadM SNP 0025.scaffold00096 180613 1 A T - ReadM SNP 0025.scaffold00096 180693 1 A G - ReadM SNP 0025.scaffold00096 180994 1 C T - ScafM SNP 0025.scaffold00096 181849 1 T C scaffold1346 ScafM SNP 0025.scaffold00096 181854 1 C T scaffold1346 ScafM SNP 0025.scaffold00096 181860 1 G A scaffold1346 ScafM SNP 0025.scaffold00096 181864 1 G A scaffold1346 ScafM SNP 0025.scaffold00096 182015 1 G C scaffold1346 ScafM SNP 0025.scaffold00096 182018 1 G C scaffold1346 ScafM SNP 0025.scaffold00096 182035 1 C T scaffold1346 ScafM SNP 0025.scaffold00096 182054 1 A G scaffold1346 ScafM INDEL 0025.scaffold00096 182057 2 .. TC scaffold1346 ScafM INDEL 0025.scaffold00096 182060 2 .. CG scaffold1346 ScafM SNP 0025.scaffold00096 182074 1 A G scaffold1346 ScafM SNP 0025.scaffold00096 182095 1 T C scaffold1346 ScafM INDEL 0025.scaffold00096 182139 12 TGTTTTTTAAGA ............ scaffold1346 ScafM INDEL 0025.scaffold00096 182163 8 TTTTCAGT ........ scaffold1346 ScafM SNP 0025.scaffold00096 182207 1 A G scaffold1346 ScafM SNP 0025.scaffold00096 182479 1 T C scaffold3658 ScafM SNP 0025.scaffold00096 182482 1 A G scaffold3658 ScafM SNP 0025.scaffold00096 182487 1 C T scaffold3658 ScafM SNP 0025.scaffold00096 182518 1 A C scaffold3658 ScafM INDEL 0025.scaffold00096 182521 15 ............... TTTTTTTTTCGGTTC scaffold3658 ScafM INDEL 0025.scaffold00096 182531 1 . T scaffold3658 ScafM SNP 0025.scaffold00096 182545 1 C G scaffold3658 ScafM SNP 0025.scaffold00096 182549 1 G A scaffold3658 ScafM SNP 0025.scaffold00096 182555 1 C T scaffold3658 ScafM SNP 0025.scaffold00096 182561 1 G T scaffold3658 ScafM SNP 0025.scaffold00096 182564 1 T A scaffold3658 ScafM SNP 0025.scaffold00096 182566 1 C G scaffold3658 ScafM SNP 0025.scaffold00096 182580 1 C T scaffold3658 ScafM SNP 0025.scaffold00096 182587 1 T C scaffold3658 ScafM INDEL 0025.scaffold00096 182588 1 . T scaffold3658 ScafM SNP 0025.scaffold00096 182612 1 C T scaffold3658 ScafM INDEL 0025.scaffold00096 182624 19 ................... 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C - ReadM SNP 0025.scaffold00096 190469 1 T G - ReadM SNP 0025.scaffold00096 190563 1 C T - ReadM INDEL 0025.scaffold00096 190689 1 . A - ReadM SNP 0025.scaffold00096 190722 1 T C - ReadM SNP 0025.scaffold00096 190750 1 A G - ReadM SNP 0025.scaffold00096 190778 1 T C - ReadM INDEL 0025.scaffold00096 190945 1 . T - ReadM SNP 0025.scaffold00096 191005 1 C T - ReadM SNP 0025.scaffold00096 191210 1 C T - Both SNP 0025.scaffold00096 191395 1 A G scaffold8637 ScafM SNP 0025.scaffold00096 191416 1 G A scaffold8637 ScafM SNP 0025.scaffold00096 191439 1 A G scaffold8637 ScafM INDEL 0025.scaffold00096 191501 9 CTTTGATAA ......... scaffold8637 ReadM SNP 0025.scaffold00096 194807 1 C T - ReadM SNP 0025.scaffold00096 198805 1 T G - ReadM SNP 0025.scaffold00096 199006 1 A G - ReadM SNP 0025.scaffold00096 199022 1 C T - ReadM SNP 0025.scaffold00096 199038 1 G A - ReadM SNP 0025.scaffold00096 199084 1 C T - ReadM SNP 0025.scaffold00096 199112 1 G T - ReadM SNP 0025.scaffold00096 199159 1 T C - ReadM SNP 0025.scaffold00096 199622 1 T C - ReadM SNP 0025.scaffold00096 199682 1 C A - ReadM SNP 0025.scaffold00096 204032 1 T G - ReadM SNP 0025.scaffold00096 204036 1 C T - ReadM SNP 0025.scaffold00096 204068 1 A C - ReadM SNP 0025.scaffold00096 204096 1 C T - ReadM SNP 0025.scaffold00096 204164 1 A T - ReadM SNP 0025.scaffold00096 204204 1 T C - ReadM SNP 0025.scaffold00096 204291 1 G A - ReadM SNP 0025.scaffold00096 204299 1 C T - ReadM SNP 0025.scaffold00096 204381 1 A G - ReadM SNP 0025.scaffold00096 204394 1 T C - ReadM SNP 0025.scaffold00096 204546 1 C T - ReadM SNP 0025.scaffold00096 204754 1 G T - ReadM SNP 0025.scaffold00096 207683 1 A G - ReadM SNP 0025.scaffold00096 207724 1 C A - ReadM SNP 0025.scaffold00096 207954 1 T C - ReadM INDEL 0025.scaffold00096 207991 1 . G - ReadM SNP 0025.scaffold00096 208059 1 C A - ReadM SNP 0025.scaffold00096 208106 1 G C - ReadM SNP 0025.scaffold00096 208178 1 T G - ReadM SNP 0025.scaffold00096 208324 1 G A - ReadM SNP 0025.scaffold00096 208332 1 A G - ReadM SNP 0025.scaffold00096 208679 1 G A - ReadM SNP 0025.scaffold00096 208764 1 T G - ReadM SNP 0025.scaffold00096 208843 1 C T - ReadM SNP 0025.scaffold00096 208870 1 C T - ReadM SNP 0025.scaffold00096 208873 1 C T - ReadM SNP 0025.scaffold00096 208984 1 T C - ReadM SNP 0025.scaffold00096 208990 1 A T - ReadM SNP 0025.scaffold00096 209011 1 A G - ReadM SNP 0025.scaffold00096 209216 1 A G - ReadM INDEL 0025.scaffold00096 209232 1 A . - ReadM SNP 0025.scaffold00096 209255 1 A C - ReadM SNP 0025.scaffold00096 209306 1 C T - ReadM SNP 0025.scaffold00096 209317 1 A G - ReadM SNP 0025.scaffold00096 209480 1 G C - ReadM SNP 0025.scaffold00096 209518 1 G A - ReadM SNP 0025.scaffold00096 209556 1 C T - ReadM SNP 0025.scaffold00096 209621 1 T G - ReadM SNP 0025.scaffold00096 209653 1 T C - ReadM SNP 0025.scaffold00096 209672 1 C T - ReadM SNP 0025.scaffold00096 209698 1 G A - ReadM SNP 0025.scaffold00096 209716 1 A G - ReadM SNP 0025.scaffold00096 209721 1 G A - ReadM SNP 0025.scaffold00096 209834 1 A G - ReadM SNP 0025.scaffold00096 209932 1 T C - ReadM SNP 0025.scaffold00096 210025 1 C T - ReadM SNP 0025.scaffold00096 210066 1 G A - ReadM SNP 0025.scaffold00096 210151 1 A G - ReadM SNP 0025.scaffold00096 210169 1 T G - ReadM SNP 0025.scaffold00096 210333 1 T A - ReadM SNP 0025.scaffold00096 210357 1 G A - ReadM SNP 0025.scaffold00096 210472 1 A G - ReadM SNP 0025.scaffold00096 210521 1 G A - ReadM SNP 0025.scaffold00096 210730 1 G A - ReadM INDEL 0025.scaffold00096 210868 2 AA .. - ReadM SNP 0025.scaffold00096 210899 1 T A - ReadM SNP 0025.scaffold00096 210942 1 T C - ReadM SNP 0025.scaffold00096 210959 1 T C - ReadM SNP 0025.scaffold00096 211061 1 G A - ReadM SNP 0025.scaffold00096 211140 1 G T - ReadM SNP 0025.scaffold00096 211170 2 AA GT - ReadM SNP 0025.scaffold00096 211245 1 G T - ReadM SNP 0025.scaffold00096 211281 1 A T - ReadM INDEL 0025.scaffold00096 211291 1 . T - ReadM SNP 0025.scaffold00096 211362 1 G T - ReadM SNP 0025.scaffold00096 211380 1 A G - ReadM SNP 0025.scaffold00096 211408 1 A G - ReadM SNP 0025.scaffold00096 211581 1 C T - ReadM INDEL 0025.scaffold00096 211597 1 . A - ReadM SNP 0025.scaffold00096 211698 1 C T - ReadM SNP 0025.scaffold00096 211719 1 A G - ReadM SNP 0025.scaffold00096 211753 1 A C - ReadM SNP 0025.scaffold00096 211786 1 C T - ReadM SNP 0025.scaffold00096 212002 1 A G - ReadM SNP 0025.scaffold00096 212031 1 G C - ReadM SNP 0025.scaffold00096 212113 1 A T - ReadM SNP 0025.scaffold00096 212280 1 C T - ReadM SNP 0025.scaffold00096 212300 1 G C - ReadM SNP 0025.scaffold00096 212358 1 G A - ReadM SNP 0025.scaffold00096 212713 1 G A - ReadM SNP 0025.scaffold00096 212801 1 A C - ReadM SNP 0025.scaffold00096 212837 1 C G - ReadM SNP 0025.scaffold00096 212905 1 A T - ReadM SNP 0025.scaffold00096 212925 1 G C - ReadM SNP 0025.scaffold00096 212944 1 T C - ReadM SNP 0025.scaffold00096 213041 1 C T - ReadM SNP 0025.scaffold00096 213083 1 A C - ReadM SNP 0025.scaffold00096 213243 1 C T - ReadM SNP 0025.scaffold00096 213355 1 A G - ReadM SNP 0025.scaffold00096 213431 1 T A - ReadM SNP 0025.scaffold00096 213465 1 A G - ReadM SNP 0025.scaffold00096 213809 1 A C - ReadM SNP 0025.scaffold00096 213852 1 A T - ReadM SNP 0025.scaffold00096 214003 1 A G - ReadM SNP 0025.scaffold00096 214030 1 C T - ReadM SNP 0025.scaffold00096 214087 1 G T - ReadM SNP 0025.scaffold00096 214106 1 C G - ReadM SNP 0025.scaffold00096 214147 1 T G - ReadM SNP 0025.scaffold00096 214170 1 T C - ReadM INDEL 0025.scaffold00096 214268 1 . T - ReadM SNP 0025.scaffold00096 214298 1 C T - ReadM SNP 0025.scaffold00096 214360 1 C A - ReadM SNP 0025.scaffold00096 214519 1 A T - ReadM SNP 0025.scaffold00096 214588 1 A T - ReadM SNP 0025.scaffold00096 214810 1 A G - ReadM SNP 0025.scaffold00096 214874 1 G A - ReadM SNP 0025.scaffold00096 214937 1 C T - Both SNP 0025.scaffold00096 215163 1 G A scaffold5495 ReadM SNP 0025.scaffold00096 215250 1 A G - ReadM SNP 0025.scaffold00096 215300 1 C T - ScafM SNP 0025.scaffold00096 216129 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 216161 1 C G scaffold5495 ScafM INDEL 0025.scaffold00096 216171 1 A . scaffold5495 ScafM SNP 0025.scaffold00096 216178 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 216208 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 216237 1 A C scaffold5495 ReadM SNP 0025.scaffold00096 216698 1 A C - ReadM SNP 0025.scaffold00096 216709 1 T C - ReadM SNP 0025.scaffold00096 216766 1 C A - ReadM SNP 0025.scaffold00096 216938 1 T C - Both SNP 0025.scaffold00096 217087 1 C T scaffold5495 Both SNP 0025.scaffold00096 217217 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 217317 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 217336 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 217340 1 A G scaffold5495 ReadM INDEL 0025.scaffold00096 218336 1 C . - ReadM SNP 0025.scaffold00096 218339 1 A T - ReadM SNP 0025.scaffold00096 218646 1 G A - ReadM SNP 0025.scaffold00096 218727 1 C A - ReadM SNP 0025.scaffold00096 219984 1 G A - ReadM SNP 0025.scaffold00096 219995 1 T C - ReadM SNP 0025.scaffold00096 220018 1 T C - ScafM SNP 0025.scaffold00096 220274 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 220320 1 . T scaffold5495 ScafM SNP 0025.scaffold00096 220322 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 224330 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 224333 1 T A scaffold5495 ScafM INDEL 0025.scaffold00096 224336 5 TTTTG ..... scaffold5495 ScafM SNP 0025.scaffold00096 224355 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 224363 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 224369 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 224399 1 G T scaffold5495 ScafM INDEL 0025.scaffold00096 224404 1 . A scaffold5495 ScafM SNP 0025.scaffold00096 224418 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 224475 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 224536 1 C A scaffold5495 ScafM SNP 0025.scaffold00096 224557 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 224559 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 224572 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 224608 1 A C scaffold5495 ScafM INDEL 0025.scaffold00096 224619 18 .................. ACATTATTATGCTCTATA scaffold5495 ScafM SNP 0025.scaffold00096 224698 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 224704 1 T G scaffold5495 ScafM SNP 0025.scaffold00096 224721 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 224750 1 A T scaffold5495 ReadM SNP 0025.scaffold00096 224899 1 C T - Both INDEL 0025.scaffold00096 224962 2 GT .. scaffold5495 Both SNP 0025.scaffold00096 225011 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 225056 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 225107 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 225155 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 225188 1 C A scaffold5495 Both INDEL 0025.scaffold00096 225234 1 T . scaffold5495 ScafM SNP 0025.scaffold00096 225287 1 G T scaffold5495 Both SNP 0025.scaffold00096 225335 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 225438 1 C A scaffold5495 ScafM INDEL 0025.scaffold00096 225491 1 G . scaffold5495 ReadM SNP 0025.scaffold00096 226309 1 G A - ReadM SNP 0025.scaffold00096 226352 1 T C - ReadM SNP 0025.scaffold00096 226356 1 C T - ReadM SNP 0025.scaffold00096 226519 1 T C - ReadM SNP 0025.scaffold00096 227015 1 T C - ReadM SNP 0025.scaffold00096 227019 1 G C - ReadM SNP 0025.scaffold00096 227075 1 G A - ReadM SNP 0025.scaffold00096 227135 1 C T - ReadM INDEL 0025.scaffold00096 227146 1 T . - ReadM SNP 0025.scaffold00096 227185 1 C T - ReadM SNP 0025.scaffold00096 227286 1 G C - ReadM SNP 0025.scaffold00096 227497 1 T C - ReadM SNP 0025.scaffold00096 227601 1 G A - ReadM SNP 0025.scaffold00096 227685 1 T G - ReadM SNP 0025.scaffold00096 227847 1 G A - ReadM SNP 0025.scaffold00096 228030 1 T C - ScafM SNP 0025.scaffold00096 228388 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 228415 1 G T scaffold5495 ScafM INDEL 0025.scaffold00096 228572 5 ACACA ..... scaffold5495 ScafM INDEL 0025.scaffold00096 228740 9 ......... CATTTACTA scaffold5495 ScafM SNP 0025.scaffold00096 228755 1 G A scaffold5495 ScafM INDEL 0025.scaffold00096 229242 19 TGTTGAATTGTTTTTTTTT ................... scaffold5495 ScafM INDEL 0025.scaffold00096 229492 1 G . scaffold5495 ScafM SNP 0025.scaffold00096 229526 2 GG TT scaffold5495 ScafM SNP 0025.scaffold00096 229529 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 229532 3 AGG TTT scaffold5495 ScafM SNP 0025.scaffold00096 229536 4 AGCG TTTT scaffold5495 ScafM SNP 0025.scaffold00096 229542 2 TT AA scaffold5495 Both SNP 0025.scaffold00096 229612 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 229789 1 T C scaffold5495 Both SNP 0025.scaffold00096 229911 1 C A scaffold5495 ScafM SNP 0025.scaffold00096 230012 2 TA CT scaffold5495 Both SNP 0025.scaffold00096 230030 1 T A scaffold5495 ScafM INDEL 0025.scaffold00096 230188 2 .. TT scaffold5495 ScafM SNP 0025.scaffold00096 230238 1 C T scaffold5495 Both SNP 0025.scaffold00096 230337 1 G A scaffold5495 Both SNP 0025.scaffold00096 230497 1 A G scaffold5495 Both SNP 0025.scaffold00096 230526 1 A C scaffold5495 Both SNP 0025.scaffold00096 230856 1 C G scaffold5495 Both INDEL 0025.scaffold00096 230875 1 . G scaffold5495 ScafM SNP 0025.scaffold00096 230879 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 231019 1 G A scaffold5495 Both SNP 0025.scaffold00096 231278 1 A G scaffold5495 Both INDEL 0025.scaffold00096 231486 1 . T scaffold5495 Both INDEL 0025.scaffold00096 231576 1 . A scaffold5495 Both SNP 0025.scaffold00096 231684 1 G A scaffold5495 Both SNP 0025.scaffold00096 231853 1 A T scaffold5495 Both SNP 0025.scaffold00096 231940 1 G A scaffold5495 ReadM SNP 0025.scaffold00096 232126 1 C G - Both SNP 0025.scaffold00096 232306 1 A G scaffold5495 Both INDEL 0025.scaffold00096 232373 1 C . scaffold5495 ScafM SNP 0025.scaffold00096 232391 1 A T scaffold5495 Both SNP 0025.scaffold00096 232467 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 232533 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 232547 1 T C scaffold5495 ScafM INDEL 0025.scaffold00096 232602 4 .... TTTT scaffold5495 ScafM SNP 0025.scaffold00096 232606 1 G T scaffold5495 Both SNP 0025.scaffold00096 233123 1 T C scaffold5495 Both INDEL 0025.scaffold00096 233516 1 . T scaffold5495 Both SNP 0025.scaffold00096 233532 1 G C scaffold5495 Both SNP 0025.scaffold00096 233928 1 C A scaffold5495 Both SNP 0025.scaffold00096 234089 1 C T scaffold5495 Both SNP 0025.scaffold00096 234109 1 G A scaffold5495 Both SNP 0025.scaffold00096 234121 1 G A scaffold5495 ReadM INDEL 0025.scaffold00096 234299 3 TTT ... - ScafM INDEL 0025.scaffold00096 234311 34 TTTTGAAGCAAGCATTGATAGTTTTTTTTTTTTT .................................. scaffold5495 ScafM INDEL 0025.scaffold00096 234378 33 TTTTGAAGCAAGCTATTGATTATTTTTTTTTTT ................................. scaffold5495 ScafM INDEL 0025.scaffold00096 234413 1 T . scaffold5495 ScafM INDEL 0025.scaffold00096 234438 2 TT .. scaffold5495 ReadM SNP 0025.scaffold00096 234743 1 T A - ScafM SNP 0025.scaffold00096 234774 1 C T scaffold5495 ReadM SNP 0025.scaffold00096 235018 1 T C - ReadM SNP 0025.scaffold00096 235128 1 A T - ReadM SNP 0025.scaffold00096 235172 1 A C - ReadM SNP 0025.scaffold00096 235357 1 T G - Both SNP 0025.scaffold00096 235480 1 C T scaffold5495 Both SNP 0025.scaffold00096 235540 1 A T scaffold5495 Both SNP 0025.scaffold00096 235604 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 235736 1 G A scaffold5495 Both SNP 0025.scaffold00096 235775 1 A G scaffold5495 Both SNP 0025.scaffold00096 235837 1 G A scaffold5495 Both SNP 0025.scaffold00096 235851 1 C T scaffold5495 Both SNP 0025.scaffold00096 235869 1 G A scaffold5495 Both SNP 0025.scaffold00096 235928 1 A G scaffold5495 Both INDEL 0025.scaffold00096 235931 1 G . scaffold5495 Both SNP 0025.scaffold00096 236172 1 C T scaffold5495 ReadM SNP 0025.scaffold00096 236224 1 T G - ScafM INDEL 0025.scaffold00096 236324 6 ...... AAATGC scaffold5495 Both SNP 0025.scaffold00096 236585 1 A G scaffold5495 Both SNP 0025.scaffold00096 237798 1 A G scaffold5495 Both SNP 0025.scaffold00096 237825 1 T A scaffold5495 Both SNP 0025.scaffold00096 237879 1 C A scaffold5495 Both SNP 0025.scaffold00096 238034 1 C T scaffold5495 ReadM SNP 0025.scaffold00096 238513 1 A T - ReadM SNP 0025.scaffold00096 238540 1 C T - ReadM SNP 0025.scaffold00096 238583 1 T A - ReadM SNP 0025.scaffold00096 238646 1 A T - Both SNP 0025.scaffold00096 238787 1 G A scaffold5495 Both SNP 0025.scaffold00096 238847 1 G C scaffold5495 Both SNP 0025.scaffold00096 238987 1 A G scaffold5495 Both SNP 0025.scaffold00096 238998 1 T C scaffold5495 Both SNP 0025.scaffold00096 239098 1 G C scaffold5495 Both SNP 0025.scaffold00096 239172 1 A G scaffold5495 Both SNP 0025.scaffold00096 239186 1 T C scaffold5495 Both SNP 0025.scaffold00096 239398 1 C T scaffold5495 Both SNP 0025.scaffold00096 239478 1 T C scaffold5495 Both INDEL 0025.scaffold00096 239692 1 . A scaffold5495 Both SNP 0025.scaffold00096 239824 1 T C scaffold5495 Both SNP 0025.scaffold00096 239876 1 A G scaffold5495 Both SNP 0025.scaffold00096 239878 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 240027 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 240028 2 .. TG scaffold5495 ScafM INDEL 0025.scaffold00096 240030 4 .... TTCA scaffold5495 ScafM INDEL 0025.scaffold00096 240031 1 . A scaffold5495 Both SNP 0025.scaffold00096 240127 1 C A scaffold5495 Both SNP 0025.scaffold00096 240322 1 C T scaffold5495 Both SNP 0025.scaffold00096 240377 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 240946 1 T C scaffold5495 Both SNP 0025.scaffold00096 241026 1 A G scaffold5495 ReadM INDEL 0025.scaffold00096 241115 1 . A - Both SNP 0025.scaffold00096 241619 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 241768 1 G A scaffold5495 Both SNP 0025.scaffold00096 242218 1 T C scaffold5495 Both SNP 0025.scaffold00096 242561 1 T C scaffold5495 ReadM INDEL 0025.scaffold00096 242612 1 A . - ReadM SNP 0025.scaffold00096 242858 1 T C - ReadM SNP 0025.scaffold00096 242865 1 G A - ReadM SNP 0025.scaffold00096 242872 1 T G - ReadM SNP 0025.scaffold00096 242911 1 T C - ReadM SNP 0025.scaffold00096 242919 1 T G - ReadM SNP 0025.scaffold00096 242954 1 A G - ReadM SNP 0025.scaffold00096 242995 1 A G - ReadM SNP 0025.scaffold00096 243012 1 T C - Both SNP 0025.scaffold00096 243098 1 C T scaffold5495 Both SNP 0025.scaffold00096 243169 1 T G scaffold5495 Both SNP 0025.scaffold00096 243221 1 A C scaffold5495 Both INDEL 0025.scaffold00096 243607 1 T . scaffold5495 ReadM SNP 0025.scaffold00096 243746 1 G A - ReadM SNP 0025.scaffold00096 243884 1 T A - Both SNP 0025.scaffold00096 243928 1 G A scaffold5495 Both SNP 0025.scaffold00096 244001 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 244162 1 G A scaffold5495 Both INDEL 0025.scaffold00096 244216 1 . C scaffold5495 Both SNP 0025.scaffold00096 244245 1 C G scaffold5495 Both SNP 0025.scaffold00096 244256 1 T A scaffold5495 Both SNP 0025.scaffold00096 244632 1 C T scaffold5495 Both SNP 0025.scaffold00096 244666 1 A G scaffold5495 Both SNP 0025.scaffold00096 244827 1 G A scaffold5495 Both SNP 0025.scaffold00096 244909 1 A G scaffold5495 Both SNP 0025.scaffold00096 244932 1 C T scaffold5495 Both SNP 0025.scaffold00096 245316 1 C T scaffold5495 Both SNP 0025.scaffold00096 245878 1 G T scaffold5495 Both SNP 0025.scaffold00096 245898 1 A G scaffold5495 Both SNP 0025.scaffold00096 245943 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 245956 1 C T scaffold5495 ReadM SNP 0025.scaffold00096 246046 1 G T - ReadM SNP 0025.scaffold00096 246065 1 C T - ReadM SNP 0025.scaffold00096 246083 1 G T - ReadM SNP 0025.scaffold00096 246232 1 C T - Both SNP 0025.scaffold00096 246280 1 G T scaffold5495 Both SNP 0025.scaffold00096 246436 1 G C scaffold5495 Both SNP 0025.scaffold00096 246500 1 A G scaffold5495 ReadM SNP 0025.scaffold00096 246679 1 T G - Both INDEL 0025.scaffold00096 246766 1 . G scaffold5495 Both SNP 0025.scaffold00096 246773 1 A T scaffold5495 Both SNP 0025.scaffold00096 246930 1 G A scaffold5495 Both SNP 0025.scaffold00096 247282 1 A C scaffold5495 Both SNP 0025.scaffold00096 247293 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 247465 26 AACTTGCAATAAGTGATATTTGAAAG .......................... scaffold5495 Both SNP 0025.scaffold00096 247650 1 G A scaffold5495 Both SNP 0025.scaffold00096 247679 1 A T scaffold5495 Both SNP 0025.scaffold00096 247714 1 C A scaffold5495 ScafM SNP 0025.scaffold00096 247897 1 A T scaffold5495 ReadM SNP 0025.scaffold00096 248165 1 A C - ReadM SNP 0025.scaffold00096 248328 1 T A - Both SNP 0025.scaffold00096 248644 1 T A scaffold5495 Both SNP 0025.scaffold00096 248652 1 T C scaffold5495 Both SNP 0025.scaffold00096 248781 1 G T scaffold5495 Both SNP 0025.scaffold00096 248847 1 A T scaffold5495 Both SNP 0025.scaffold00096 248892 1 T A scaffold5495 Both SNP 0025.scaffold00096 248938 1 G C scaffold5495 Both SNP 0025.scaffold00096 249204 1 A C scaffold5495 Both SNP 0025.scaffold00096 249737 1 G C scaffold5495 Both SNP 0025.scaffold00096 249741 1 G T scaffold5495 Both SNP 0025.scaffold00096 249758 1 A G scaffold5495 Both SNP 0025.scaffold00096 249986 1 C T scaffold5495 Both SNP 0025.scaffold00096 250161 1 T A scaffold5495 Both SNP 0025.scaffold00096 250258 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 250380 1 C A scaffold5495 ScafM SNP 0025.scaffold00096 250464 1 A C scaffold5495 ScafM INDEL 0025.scaffold00096 250475 2 .. AA scaffold5495 ReadM INDEL 0025.scaffold00096 251596 1 A . - ReadM SNP 0025.scaffold00096 251619 1 T C - ReadM SNP 0025.scaffold00096 251739 1 A G - ReadM SNP 0025.scaffold00096 251770 1 T A - ScafM SNP 0025.scaffold00096 252192 1 C T scaffold6954 ScafM INDEL 0025.scaffold00096 252842 2 .. AA scaffold6954 ScafM SNP 0025.scaffold00096 252872 1 C T scaffold6954 ScafM SNP 0025.scaffold00096 252966 1 C T scaffold6954 ScafM SNP 0025.scaffold00096 253406 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 253537 1 G A scaffold5495 ScafM INDEL 0025.scaffold00096 253546 7 CAACTAT ....... scaffold5495 ScafM SNP 0025.scaffold00096 253581 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 253615 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 253644 1 C T scaffold5495 ReadM SNP 0025.scaffold00096 254201 1 G C - ReadM SNP 0025.scaffold00096 254210 1 C T - ScafM SNP 0025.scaffold00096 256875 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 256883 2 CC TT scaffold5495 Both SNP 0025.scaffold00096 257006 1 G C scaffold5495 Both INDEL 0025.scaffold00096 257019 1 . T scaffold5495 ScafM SNP 0025.scaffold00096 257318 2 CG TC scaffold5495 Both SNP 0025.scaffold00096 257323 1 C T scaffold5495 Both SNP 0025.scaffold00096 257440 1 T C scaffold5495 ReadM SNP 0025.scaffold00096 257530 1 T C - ReadM SNP 0025.scaffold00096 257856 1 A T - ReadM SNP 0025.scaffold00096 257908 1 A T - ReadM SNP 0025.scaffold00096 257957 1 T C - ReadM SNP 0025.scaffold00096 258010 1 A G - ReadM SNP 0025.scaffold00096 258042 1 A G - Both SNP 0025.scaffold00096 258160 1 C G scaffold5495 Both INDEL 0025.scaffold00096 258232 3 ATG ... scaffold5495 Both SNP 0025.scaffold00096 258336 1 G T scaffold5495 Both SNP 0025.scaffold00096 258348 1 G C scaffold5495 Both SNP 0025.scaffold00096 258359 1 C T scaffold5495 Both SNP 0025.scaffold00096 258419 1 A T scaffold5495 Both SNP 0025.scaffold00096 258423 1 G C scaffold5495 Both SNP 0025.scaffold00096 258496 1 G A scaffold5495 Both SNP 0025.scaffold00096 258581 1 C G scaffold5495 Both SNP 0025.scaffold00096 258620 1 A T scaffold5495 Both SNP 0025.scaffold00096 258641 1 A T scaffold5495 Both SNP 0025.scaffold00096 258645 1 A C scaffold5495 Both SNP 0025.scaffold00096 258774 1 C T scaffold5495 Both SNP 0025.scaffold00096 258813 1 A G scaffold5495 Both SNP 0025.scaffold00096 259041 1 T C scaffold5495 Both SNP 0025.scaffold00096 259043 1 A G scaffold5495 Both SNP 0025.scaffold00096 259082 1 G A scaffold5495 Both SNP 0025.scaffold00096 259102 1 T G scaffold5495 ScafM INDEL 0025.scaffold00096 259407 1 . T scaffold5495 ScafM SNP 0025.scaffold00096 259409 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 259411 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 259491 1 C A scaffold5495 ScafM INDEL 0025.scaffold00096 261375 1 . A scaffold5495 ScafM SNP 0025.scaffold00096 261399 1 G C scaffold5495 ScafM SNP 0025.scaffold00096 261428 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 261460 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 261556 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 261595 1 G T scaffold5495 ReadM SNP 0025.scaffold00096 261905 1 G T - Both SNP 0025.scaffold00096 261929 1 C T scaffold5495 Both SNP 0025.scaffold00096 262011 1 A T scaffold5495 Both SNP 0025.scaffold00096 262019 1 A T scaffold5495 Both SNP 0025.scaffold00096 262052 1 G T scaffold5495 Both SNP 0025.scaffold00096 262137 1 C T scaffold5495 Both SNP 0025.scaffold00096 262170 1 A G scaffold5495 Both SNP 0025.scaffold00096 262172 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 262199 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 262209 1 G A scaffold5495 ReadM SNP 0025.scaffold00096 262404 1 G A - ReadM SNP 0025.scaffold00096 262445 1 A G - ReadM SNP 0025.scaffold00096 262452 1 A G - ScafM INDEL 0025.scaffold00096 262516 1 . G scaffold5495 ScafM INDEL 0025.scaffold00096 262543 1 . A scaffold5495 Both SNP 0025.scaffold00096 262605 1 G A scaffold5495 Both SNP 0025.scaffold00096 262670 1 A T scaffold5495 ScafM INDEL 0025.scaffold00096 262704 2 TT .. scaffold5495 ScafM SNP 0025.scaffold00096 262712 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 262722 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 263500 1 C G scaffold11996 ScafM SNP 0025.scaffold00096 263504 1 A T scaffold11996 ScafM SNP 0025.scaffold00096 263509 1 A G scaffold11996 ScafM SNP 0025.scaffold00096 263515 1 T C scaffold11996 ScafM SNP 0025.scaffold00096 263546 1 C T scaffold11996 ScafM INDEL 0025.scaffold00096 263583 2 .. TT scaffold11996 ScafM INDEL 0025.scaffold00096 274455 1 A . scaffold5495 ScafM INDEL 0025.scaffold00096 274488 4 ATTG .... scaffold5495 ScafM SNP 0025.scaffold00096 274497 2 GT AA scaffold5495 ScafM INDEL 0025.scaffold00096 274500 2 GC .. scaffold5495 ScafM SNP 0025.scaffold00096 274503 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 274575 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 274581 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 274598 1 T G scaffold5495 ScafM SNP 0025.scaffold00096 274719 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 274754 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 274766 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 274768 1 C A scaffold5495 ReadM SNP 0025.scaffold00096 275113 1 C T - Both SNP 0025.scaffold00096 275157 1 G T scaffold5495 ScafM INDEL 0025.scaffold00096 275183 2 .. TT scaffold5495 ScafM SNP 0025.scaffold00096 275186 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 275202 1 A T scaffold5495 ScafM INDEL 0025.scaffold00096 275240 3 ... AAT scaffold5495 ScafM INDEL 0025.scaffold00096 275241 2 .. AA scaffold5495 ScafM SNP 0025.scaffold00096 275243 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 275263 1 C T scaffold5495 Both SNP 0025.scaffold00096 275270 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 275311 1 T G scaffold5495 ReadM SNP 0025.scaffold00096 275397 1 G A - ReadM SNP 0025.scaffold00096 275561 1 T G - ReadM INDEL 0025.scaffold00096 275574 1 T . - ReadM SNP 0025.scaffold00096 275588 1 T C - ReadM SNP 0025.scaffold00096 275638 1 T G - ReadM SNP 0025.scaffold00096 275696 1 C T - ReadM SNP 0025.scaffold00096 275720 1 C A - ScafM SNP 0025.scaffold00096 276300 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 276331 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 276338 1 T C scaffold5495 ScafM INDEL 0025.scaffold00096 276445 6 ...... AATTTT scaffold5495 ScafM INDEL 0025.scaffold00096 276537 5 ..... ATGAT scaffold5495 ScafM SNP 0025.scaffold00096 276598 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 276654 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 276689 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 276693 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 276703 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 276705 1 T A scaffold5495 ReadM SNP 0025.scaffold00096 277069 1 T C - ReadM SNP 0025.scaffold00096 277157 1 T A - ReadM SNP 0025.scaffold00096 277169 1 A G - ReadM SNP 0025.scaffold00096 277176 1 T C - ScafM INDEL 0025.scaffold00096 277279 1 . T scaffold5495 Both INDEL 0025.scaffold00096 277318 1 C . scaffold5495 Both SNP 0025.scaffold00096 277347 1 G C scaffold5495 ReadM SNP 0025.scaffold00096 277384 1 C T - ScafM SNP 0025.scaffold00096 277445 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 277453 3 ... ACT scaffold5495 Both SNP 0025.scaffold00096 277548 1 C G scaffold5495 Both SNP 0025.scaffold00096 277559 1 T C scaffold5495 ScafM INDEL 0025.scaffold00096 277658 9 ......... AATATATGT scaffold5495 Both SNP 0025.scaffold00096 277825 1 T G scaffold5495 Both SNP 0025.scaffold00096 277846 1 C G scaffold5495 Both SNP 0025.scaffold00096 277924 1 A C scaffold5495 Both SNP 0025.scaffold00096 277939 1 T C scaffold5495 Both SNP 0025.scaffold00096 277956 1 C A scaffold5495 Both SNP 0025.scaffold00096 278101 1 C T scaffold5495 Both SNP 0025.scaffold00096 278148 1 C T scaffold5495 Both SNP 0025.scaffold00096 278239 1 A T scaffold5495 Both SNP 0025.scaffold00096 278263 1 T C scaffold5495 Both SNP 0025.scaffold00096 278437 1 C T scaffold5495 Both SNP 0025.scaffold00096 278477 1 T G scaffold5495 Both SNP 0025.scaffold00096 278484 1 A G scaffold5495 Both SNP 0025.scaffold00096 278519 1 T G scaffold5495 Both SNP 0025.scaffold00096 278525 1 G A scaffold5495 Both SNP 0025.scaffold00096 278528 1 T C scaffold5495 Both SNP 0025.scaffold00096 278608 1 A G scaffold5495 Both SNP 0025.scaffold00096 278653 1 T A scaffold5495 Both SNP 0025.scaffold00096 278754 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 278761 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 278776 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 278793 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 279216 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 279253 2 TC CG scaffold5495 ScafM INDEL 0025.scaffold00096 279290 1 . A scaffold5495 ScafM INDEL 0025.scaffold00096 279353 1 C . scaffold5495 ScafM SNP 0025.scaffold00096 279577 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 279579 1 A G scaffold5495 ScafM INDEL 0025.scaffold00096 279588 1 C . scaffold5495 ScafM SNP 0025.scaffold00096 279599 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 279625 1 A G scaffold5495 ScafM INDEL 0025.scaffold00096 279634 2 .. CT scaffold5495 ScafM SNP 0025.scaffold00096 279644 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 279653 1 T G scaffold5495 ScafM SNP 0025.scaffold00096 279656 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 279691 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 279903 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 279918 1 G A scaffold5495 ScafM INDEL 0025.scaffold00096 279923 2 TG .. scaffold5495 ScafM SNP 0025.scaffold00096 279926 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 279934 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 279996 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 279998 1 T C scaffold5495 ScafM INDEL 0025.scaffold00096 280003 1 G . scaffold5495 ScafM SNP 0025.scaffold00096 280006 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 280022 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280025 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 280102 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280113 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280136 1 C A scaffold5495 ScafM SNP 0025.scaffold00096 280147 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 280156 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 280163 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 280421 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 280426 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 280432 3 ... AAT scaffold5495 ScafM SNP 0025.scaffold00096 280450 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 280457 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 280469 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 280480 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 280497 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 280506 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280513 2 TG CT scaffold5495 ScafM SNP 0025.scaffold00096 280519 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 280536 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280547 1 C T scaffold5495 ScafM INDEL 0025.scaffold00096 280560 2 .. TC scaffold5495 ScafM SNP 0025.scaffold00096 280567 1 A C scaffold5495 Both SNP 0025.scaffold00096 280621 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 280628 1 G C scaffold5495 ScafM SNP 0025.scaffold00096 280680 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 280688 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 280690 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280729 1 G A scaffold5495 ScafM INDEL 0025.scaffold00096 280736 6 ...... TCTTTC scaffold5495 ScafM SNP 0025.scaffold00096 280754 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 280756 2 TA CC scaffold5495 ScafM SNP 0025.scaffold00096 280768 1 G T scaffold5495 ScafM SNP 0025.scaffold00096 280780 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 280786 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 280823 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280863 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 280876 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 284029 1 T A scaffold1096 ScafM SNP 0025.scaffold00096 284032 1 A G scaffold1096 ScafM SNP 0025.scaffold00096 284075 1 A T scaffold1096 ScafM SNP 0025.scaffold00096 284110 1 C T scaffold1096 ScafM SNP 0025.scaffold00096 284112 1 A G scaffold1096 ScafM SNP 0025.scaffold00096 284115 1 T G scaffold1096 ScafM SNP 0025.scaffold00096 284121 1 C T scaffold1096 ScafM SNP 0025.scaffold00096 284132 1 G A scaffold1096 ScafM SNP 0025.scaffold00096 284147 1 G T scaffold1096 ScafM SNP 0025.scaffold00096 284151 1 G A scaffold1096 ScafM SNP 0025.scaffold00096 284160 1 C T scaffold1096 ScafM SNP 0025.scaffold00096 284163 1 A T scaffold1096 ScafM SNP 0025.scaffold00096 284253 2 CT TG scaffold1096 ReadM SNP 0025.scaffold00096 284292 1 A G - ScafM SNP 0025.scaffold00096 284324 1 T C scaffold1096 ScafM INDEL 0025.scaffold00096 284333 1 . A scaffold1096 ScafM SNP 0025.scaffold00096 284373 2 GG CA scaffold1096 ScafM SNP 0025.scaffold00096 284390 1 T C scaffold1096 ScafM SNP 0025.scaffold00096 284394 1 T C scaffold1096 ScafM INDEL 0025.scaffold00096 284396 1 T . scaffold1096 ScafM SNP 0025.scaffold00096 284414 1 T A scaffold1096 ScafM SNP 0025.scaffold00096 284427 1 C A scaffold1096 ScafM SNP 0025.scaffold00096 284438 1 A T scaffold1096 ScafM SNP 0025.scaffold00096 284485 1 G A scaffold1096 ReadM SNP 0025.scaffold00096 290750 1 T C - ReadM SNP 0025.scaffold00096 291348 1 T G - ScafM SNP 0025.scaffold00096 310372 1 T C scaffold11267 ScafM SNP 0025.scaffold00096 310408 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 310424 1 T C scaffold11267 ScafM SNP 0025.scaffold00096 310438 1 T C scaffold11267 ScafM SNP 0025.scaffold00096 310473 1 G A scaffold11267 ScafM SNP 0025.scaffold00096 310551 1 T G scaffold11267 ScafM SNP 0025.scaffold00096 310614 1 A T scaffold11267 ScafM SNP 0025.scaffold00096 310648 1 T G scaffold11267 ScafM SNP 0025.scaffold00096 310658 1 G T scaffold11267 ScafM SNP 0025.scaffold00096 310661 1 C A scaffold11267 ScafM SNP 0025.scaffold00096 310686 1 T G scaffold11267 ScafM SNP 0025.scaffold00096 310726 1 T G scaffold11267 Both SNP 0025.scaffold00096 310800 1 C T scaffold11267 Both SNP 0025.scaffold00096 310869 1 A C scaffold11267 ScafM SNP 0025.scaffold00096 310904 1 G T scaffold11267 ScafM SNP 0025.scaffold00096 310939 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 311242 1 T A scaffold11267 Both SNP 0025.scaffold00096 311270 1 A T scaffold11267 Both SNP 0025.scaffold00096 311358 1 A G scaffold11267 ScafM INDEL 0025.scaffold00096 311491 8 GTACTACA ........ scaffold11267 ScafM SNP 0025.scaffold00096 311517 1 C T scaffold11267 ScafM SNP 0025.scaffold00096 311566 1 T C scaffold11267 ScafM SNP 0025.scaffold00096 311616 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 311622 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 311643 1 G A scaffold11267 ScafM SNP 0025.scaffold00096 311666 1 T A scaffold11267 ScafM SNP 0025.scaffold00096 311699 1 A G scaffold11267 Both SNP 0025.scaffold00096 311764 1 T C scaffold11267 ScafM SNP 0025.scaffold00096 311851 1 C A scaffold11267 ScafM INDEL 0025.scaffold00096 311860 8 ........ TATTATTA scaffold11267 Both SNP 0025.scaffold00096 311914 1 C A scaffold11267 ScafM SNP 0025.scaffold00096 312061 1 A G scaffold11267 ScafM INDEL 0025.scaffold00096 312272 1 . T scaffold11267 ScafM SNP 0025.scaffold00096 312359 1 T A scaffold11267 ScafM SNP 0025.scaffold00096 312361 1 C T scaffold11267 ScafM SNP 0025.scaffold00096 312371 1 T A scaffold11267 ScafM INDEL 0025.scaffold00096 312385 2 .. AC scaffold11267 ScafM INDEL 0025.scaffold00096 312407 7 GAAGGAA ....... scaffold11267 ScafM INDEL 0025.scaffold00096 312415 8 AGAGACAA ........ scaffold11267 ScafM INDEL 0025.scaffold00096 312425 18 TTTTTTTCCTTTTTTTTT .................. scaffold11267 ScafM SNP 0025.scaffold00096 312593 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 312639 1 C T scaffold11267 ScafM SNP 0025.scaffold00096 312665 1 A C scaffold11267 ScafM SNP 0025.scaffold00096 312711 1 T C scaffold11267 ScafM INDEL 0025.scaffold00096 312756 2 .. AA scaffold11267 ScafM SNP 0025.scaffold00096 312814 1 G T scaffold11267 ScafM INDEL 0025.scaffold00096 312858 1 G . scaffold11267 ScafM SNP 0025.scaffold00096 312870 1 T G scaffold11267 ScafM SNP 0025.scaffold00096 312882 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 312913 1 A G scaffold11267 ScafM SNP 0025.scaffold00096 312952 1 G T scaffold11267 ScafM SNP 0025.scaffold00096 312972 1 G A scaffold11267 ScafM SNP 0025.scaffold00096 313060 1 C A scaffold11267 ScafM SNP 0025.scaffold00096 314249 1 T C scaffold431 ScafM SNP 0025.scaffold00096 314252 1 A G scaffold431 ScafM SNP 0025.scaffold00096 314288 1 C T scaffold431 ScafM SNP 0025.scaffold00096 317985 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 318006 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 318062 1 A G scaffold5495 Both SNP 0025.scaffold00096 318160 1 T C scaffold5495 Both SNP 0025.scaffold00096 318243 1 C T scaffold5495 Both SNP 0025.scaffold00096 318304 1 A G scaffold5495 Both SNP 0025.scaffold00096 318333 1 C T scaffold5495 Both SNP 0025.scaffold00096 318361 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 318449 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 318559 1 A T scaffold5495 ScafM SNP 0025.scaffold00096 318582 1 G C scaffold5495 ScafM SNP 0025.scaffold00096 318654 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 318729 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 318754 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 318787 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 318805 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 318818 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 318855 1 G A scaffold5495 Both SNP 0025.scaffold00096 318918 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 319087 1 G A scaffold5495 Both SNP 0025.scaffold00096 319214 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 319254 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 320293 1 G A scaffold5495 Both SNP 0025.scaffold00096 320649 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 320761 2 TG CA scaffold5495 ScafM SNP 0025.scaffold00096 320772 1 A G scaffold5495 ScafM INDEL 0025.scaffold00096 320777 1 G . scaffold5495 ScafM INDEL 0025.scaffold00096 320779 4 TGTG .... scaffold5495 ScafM INDEL 0025.scaffold00096 320785 1 G . scaffold5495 ScafM SNP 0025.scaffold00096 320792 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 320795 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 320798 1 A C scaffold5495 ScafM SNP 0025.scaffold00096 320810 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 320813 2 CC GT scaffold5495 ScafM SNP 0025.scaffold00096 320826 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 320842 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 320847 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 320849 1 T A scaffold5495 ScafM SNP 0025.scaffold00096 320893 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 320923 1 T G scaffold5495 ScafM SNP 0025.scaffold00096 320958 2 AA GT scaffold5495 ScafM INDEL 0025.scaffold00096 320963 1 . G scaffold5495 ScafM SNP 0025.scaffold00096 321006 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 321046 1 A T scaffold5495 ScafM INDEL 0025.scaffold00096 321051 1 C . scaffold5495 ScafM SNP 0025.scaffold00096 321099 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 321142 2 TG CA scaffold5495 ScafM SNP 0025.scaffold00096 321176 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 321201 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 321221 2 AA TG scaffold5495 ScafM SNP 0025.scaffold00096 321239 1 T C scaffold5495 ScafM SNP 0025.scaffold00096 321270 1 C T scaffold5495 ScafM SNP 0025.scaffold00096 321326 1 A G scaffold5495 ScafM SNP 0025.scaffold00096 321329 1 G A scaffold5495 ScafM SNP 0025.scaffold00096 321335 1 C G scaffold5495 ScafM SNP 0025.scaffold00096 322666 1 G A scaffold17167 ScafM SNP 0025.scaffold00096 322693 1 A G scaffold17167 ScafM INDEL 0025.scaffold00096 322701 1 . A scaffold17167 ScafM SNP 0025.scaffold00096 322780 1 C T scaffold17167 ScafM SNP 0025.scaffold00096 322795 1 T A scaffold17167 ScafM SNP 0025.scaffold00096 322818 1 G A scaffold17167 ScafM SNP 0025.scaffold00096 322842 1 T G scaffold17167 ScafM SNP 0025.scaffold00096 322891 1 G A scaffold17167 ScafM SNP 0025.scaffold00096 322893 1 A G scaffold17167 ScafM SNP 0025.scaffold00096 322908 1 G C scaffold17167 ReadM SNP 0025.scaffold00096 323520 1 G A - ReadM SNP 0025.scaffold00096 323536 1 A G - ScafM SNP 0025.scaffold00096 324348 1 G A scaffold17167 ScafM SNP 0025.scaffold00096 324372 2 AG GT scaffold17167 ScafM SNP 0025.scaffold00096 324395 1 C A scaffold17167 ScafM SNP 0025.scaffold00096 324415 1 G T scaffold17167 Both SNP 0025.scaffold00096 324458 1 G A scaffold17167 Both SNP 0025.scaffold00096 324492 1 G A scaffold17167 ReadM SNP 0025.scaffold00096 324734 1 C T - ReadM SNP 0025.scaffold00096 324762 1 A T - ReadM SNP 0025.scaffold00096 325036 1 A G - ScafM SNP 0025.scaffold00096 326345 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 326365 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 326368 1 A T scaffold6069 ScafM INDEL 0025.scaffold00096 326382 1 T . scaffold6069 ScafM SNP 0025.scaffold00096 326413 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 326424 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 326435 2 TA CG scaffold6069 ScafM SNP 0025.scaffold00096 326481 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 326522 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 326560 1 T C scaffold6069 ScafM INDEL 0025.scaffold00096 326583 1 A . scaffold6069 Both SNP 0025.scaffold00096 326627 1 T C scaffold6069 ReadM SNP 0025.scaffold00096 326797 1 G A - ReadM SNP 0025.scaffold00096 326809 1 A G - ScafM SNP 0025.scaffold00096 326920 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 326941 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 326950 1 A T scaffold6069 ScafM INDEL 0025.scaffold00096 326982 3 ... GTT scaffold6069 ScafM SNP 0025.scaffold00096 326997 1 C T scaffold6069 Both SNP 0025.scaffold00096 327071 1 G A scaffold6069 Both SNP 0025.scaffold00096 327155 1 A C scaffold6069 ReadM SNP 0025.scaffold00096 327360 1 G A - ReadM SNP 0025.scaffold00096 327368 1 T G - ReadM SNP 0025.scaffold00096 327440 1 C G - ReadM SNP 0025.scaffold00096 327455 1 A T - ReadM SNP 0025.scaffold00096 327470 1 A G - ReadM SNP 0025.scaffold00096 327602 1 C T - ReadM INDEL 0025.scaffold00096 327608 1 . A - ReadM SNP 0025.scaffold00096 327654 1 C T - ReadM SNP 0025.scaffold00096 327682 1 T C - ReadM SNP 0025.scaffold00096 327743 1 C A - ReadM SNP 0025.scaffold00096 327761 1 A C - ReadM SNP 0025.scaffold00096 327801 1 A T - ReadM SNP 0025.scaffold00096 327834 1 T C - ReadM SNP 0025.scaffold00096 327854 1 A G - ReadM SNP 0025.scaffold00096 327956 1 C T - Both SNP 0025.scaffold00096 328225 1 A G scaffold6069 Both SNP 0025.scaffold00096 328377 1 T C scaffold6069 Both SNP 0025.scaffold00096 328430 1 C A scaffold6069 Both SNP 0025.scaffold00096 328437 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 328462 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 328469 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 328495 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 328534 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 328538 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 328540 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 328561 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 328587 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 328598 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 328622 1 C A scaffold6069 ScafM INDEL 0025.scaffold00096 328641 3 TAA ... scaffold6069 ScafM SNP 0025.scaffold00096 328657 1 G C scaffold6069 ReadM SNP 0025.scaffold00096 328746 1 C T - ReadM SNP 0025.scaffold00096 328749 1 T C - ReadM SNP 0025.scaffold00096 329259 1 G C - ReadM SNP 0025.scaffold00096 329275 1 T C - ReadM SNP 0025.scaffold00096 329297 1 T C - ReadM SNP 0025.scaffold00096 329417 1 C T - ReadM SNP 0025.scaffold00096 329439 1 T A - ReadM INDEL 0025.scaffold00096 329507 1 T . - ReadM SNP 0025.scaffold00096 329606 1 T C - ReadM SNP 0025.scaffold00096 329642 1 A T - ReadM SNP 0025.scaffold00096 329685 1 G A - ReadM SNP 0025.scaffold00096 329754 1 T G - ReadM SNP 0025.scaffold00096 329789 1 C G - ReadM SNP 0025.scaffold00096 329804 1 C A - ReadM SNP 0025.scaffold00096 329939 1 T C - ReadM SNP 0025.scaffold00096 329944 1 A C - ReadM SNP 0025.scaffold00096 330034 1 A T - ReadM SNP 0025.scaffold00096 330049 1 T C - ReadM SNP 0025.scaffold00096 330090 1 T G - ReadM SNP 0025.scaffold00096 330112 1 C T - ReadM SNP 0025.scaffold00096 330119 1 G T - ReadM SNP 0025.scaffold00096 330194 1 A T - ReadM SNP 0025.scaffold00096 330309 1 A C - ReadM SNP 0025.scaffold00096 330482 1 C G - ReadM SNP 0025.scaffold00096 330515 1 T C - ReadM SNP 0025.scaffold00096 330530 1 T C - ReadM SNP 0025.scaffold00096 330653 1 A C - ReadM SNP 0025.scaffold00096 330726 1 G A - ReadM SNP 0025.scaffold00096 330729 1 C G - ReadM SNP 0025.scaffold00096 330740 1 A G - ReadM SNP 0025.scaffold00096 330790 1 A G - ReadM SNP 0025.scaffold00096 330862 1 G A - ScafM SNP 0025.scaffold00096 330942 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 330978 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 330999 1 A C scaffold6069 ScafM SNP 0025.scaffold00096 331002 1 C T scaffold6069 Both SNP 0025.scaffold00096 331067 1 A G scaffold6069 Both SNP 0025.scaffold00096 331123 1 G C scaffold6069 Both SNP 0025.scaffold00096 331126 1 G A scaffold6069 ReadM SNP 0025.scaffold00096 331199 1 C T - ReadM SNP 0025.scaffold00096 331227 1 T C - ReadM SNP 0025.scaffold00096 331271 1 G A - ReadM SNP 0025.scaffold00096 331356 1 G A - ReadM SNP 0025.scaffold00096 331588 1 A G - Both SNP 0025.scaffold00096 331668 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 331751 2 GT AG scaffold6069 ScafM SNP 0025.scaffold00096 331764 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 331782 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 331797 1 T C scaffold6069 ReadM SNP 0025.scaffold00096 331979 1 C T - ScafM SNP 0025.scaffold00096 332068 1 T A scaffold6069 ScafM INDEL 0025.scaffold00096 332094 6 AGTTGA ...... scaffold6069 ScafM SNP 0025.scaffold00096 332116 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 332118 1 T C scaffold6069 ReadM SNP 0025.scaffold00096 332198 1 G A - ScafM SNP 0025.scaffold00096 332318 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 332337 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 332356 1 A T scaffold6069 ScafM INDEL 0025.scaffold00096 332406 1 A . scaffold6069 ScafM SNP 0025.scaffold00096 332412 1 A C scaffold6069 ScafM SNP 0025.scaffold00096 332428 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 332497 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 332551 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 332579 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 332782 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 332795 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 332899 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 332914 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 332941 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 332964 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 333014 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 333057 2 AT TA scaffold6069 ScafM SNP 0025.scaffold00096 333137 1 T G scaffold6069 ScafM INDEL 0025.scaffold00096 333144 1 T . scaffold6069 ScafM INDEL 0025.scaffold00096 333178 1 . A scaffold6069 ScafM SNP 0025.scaffold00096 333183 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333300 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 333308 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 333327 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 333356 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 333421 2 TT AA scaffold6069 ScafM SNP 0025.scaffold00096 333431 1 A G scaffold6069 ScafM INDEL 0025.scaffold00096 333433 1 . T scaffold6069 ScafM SNP 0025.scaffold00096 333466 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333483 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333488 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 333522 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 333527 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 333534 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 333551 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 333570 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 333586 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333624 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 333685 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 333688 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 333690 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333715 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 333718 1 T A scaffold6069 ReadM SNP 0025.scaffold00096 334355 1 C T - ReadM SNP 0025.scaffold00096 334368 1 G A - ReadM SNP 0025.scaffold00096 334430 1 A G - ReadM SNP 0025.scaffold00096 334538 1 G C - ReadM SNP 0025.scaffold00096 334551 1 A G - ReadM SNP 0025.scaffold00096 334567 1 C T - ScafM SNP 0025.scaffold00096 334628 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 334632 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 334642 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 334676 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 334681 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 334696 1 T C scaffold6069 ScafM INDEL 0025.scaffold00096 334745 1 G . scaffold6069 ScafM SNP 0025.scaffold00096 334762 2 GG AA scaffold6069 ScafM SNP 0025.scaffold00096 334790 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 334799 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 334843 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 334845 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 334847 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 334861 1 A T scaffold6069 ScafM INDEL 0025.scaffold00096 334866 2 .G TT scaffold6069 ScafM SNP 0025.scaffold00096 334869 2 AG GT scaffold6069 ScafM INDEL 0025.scaffold00096 334887 5 AAGCT ..... scaffold6069 ScafM SNP 0025.scaffold00096 334915 1 A G scaffold6069 ScafM INDEL 0025.scaffold00096 334939 1 A . scaffold6069 Both SNP 0025.scaffold00096 334978 1 A G scaffold6069 Both SNP 0025.scaffold00096 334985 1 T C scaffold6069 Both SNP 0025.scaffold00096 335002 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 335064 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 335067 1 G A scaffold6069 Both SNP 0025.scaffold00096 335236 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 335248 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 335251 1 A C scaffold6069 ReadM SNP 0025.scaffold00096 335307 1 C T - ReadM SNP 0025.scaffold00096 335311 1 C T - ReadM SNP 0025.scaffold00096 335379 1 A G - ReadM SNP 0025.scaffold00096 335388 1 A T - ReadM SNP 0025.scaffold00096 335516 1 T A - ReadM SNP 0025.scaffold00096 335555 1 T C - ReadM SNP 0025.scaffold00096 335559 1 G C - ReadM SNP 0025.scaffold00096 335617 1 T C - ReadM SNP 0025.scaffold00096 335669 1 G A - ReadM SNP 0025.scaffold00096 335672 1 A G - ReadM SNP 0025.scaffold00096 335696 1 A C - ReadM SNP 0025.scaffold00096 335903 1 T C - ReadM SNP 0025.scaffold00096 335921 1 C T - ReadM SNP 0025.scaffold00096 335984 1 G A - ReadM SNP 0025.scaffold00096 336047 1 C T - ReadM INDEL 0025.scaffold00096 336056 1 . A - ReadM SNP 0025.scaffold00096 336147 1 T C - ReadM INDEL 0025.scaffold00096 336153 1 . T - ReadM SNP 0025.scaffold00096 336215 1 G A - ReadM SNP 0025.scaffold00096 336255 1 T C - ReadM SNP 0025.scaffold00096 336387 1 A T - ReadM SNP 0025.scaffold00096 336403 1 C T - ReadM SNP 0025.scaffold00096 336450 1 T C - ReadM SNP 0025.scaffold00096 336457 1 G A - ReadM SNP 0025.scaffold00096 336516 1 T C - ReadM SNP 0025.scaffold00096 336523 1 A C - ReadM SNP 0025.scaffold00096 336618 1 C G - ReadM SNP 0025.scaffold00096 336719 1 A G - ReadM SNP 0025.scaffold00096 336746 1 T G - ReadM SNP 0025.scaffold00096 336774 1 A C - ReadM SNP 0025.scaffold00096 336796 1 G A - ReadM SNP 0025.scaffold00096 336994 1 A C - ReadM INDEL 0025.scaffold00096 337032 1 C . - ReadM SNP 0025.scaffold00096 337071 1 A C - ReadM INDEL 0025.scaffold00096 337116 2 .. GA - ReadM SNP 0025.scaffold00096 337175 1 A T - ReadM SNP 0025.scaffold00096 337187 1 G T - ReadM SNP 0025.scaffold00096 337268 1 T C - ReadM SNP 0025.scaffold00096 337311 1 G A - ReadM SNP 0025.scaffold00096 337340 1 A G - ReadM SNP 0025.scaffold00096 337366 1 C G - ReadM SNP 0025.scaffold00096 337421 1 G C - ReadM SNP 0025.scaffold00096 337568 1 G A - ReadM SNP 0025.scaffold00096 337593 1 A G - ReadM SNP 0025.scaffold00096 337628 1 C T - ReadM SNP 0025.scaffold00096 337808 1 G C - ReadM SNP 0025.scaffold00096 337811 1 T C - ReadM SNP 0025.scaffold00096 337876 1 A G - Both SNP 0025.scaffold00096 337937 1 T A scaffold6069 Both SNP 0025.scaffold00096 337966 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 338002 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 338008 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 338032 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 338055 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 338070 2 GC .. scaffold6069 ScafM SNP 0025.scaffold00096 338077 1 G T scaffold6069 ScafM INDEL 0025.scaffold00096 338156 6 AAAAAT ...... scaffold6069 ScafM SNP 0025.scaffold00096 338164 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 338180 1 A C scaffold6069 ScafM SNP 0025.scaffold00096 338209 1 T G scaffold6069 Both INDEL 0025.scaffold00096 338281 2 AG .. scaffold6069 Both SNP 0025.scaffold00096 338297 1 T C scaffold6069 Both SNP 0025.scaffold00096 338409 1 C T scaffold6069 Both SNP 0025.scaffold00096 338563 1 G A scaffold6069 Both SNP 0025.scaffold00096 338634 1 T G scaffold6069 Both SNP 0025.scaffold00096 338708 1 G A scaffold6069 Both SNP 0025.scaffold00096 338717 1 C A scaffold6069 ScafM INDEL 0025.scaffold00096 338729 1 A . scaffold6069 ScafM SNP 0025.scaffold00096 338746 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 338795 2 TA CT scaffold6069 ScafM SNP 0025.scaffold00096 338801 1 A G scaffold6069 Both SNP 0025.scaffold00096 338890 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 338924 2 AC GA scaffold6069 Both SNP 0025.scaffold00096 338956 1 G A scaffold6069 Both SNP 0025.scaffold00096 338989 1 C G scaffold6069 Both SNP 0025.scaffold00096 339048 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 339066 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 339069 1 A T scaffold6069 Both SNP 0025.scaffold00096 339080 1 G A scaffold6069 Both SNP 0025.scaffold00096 339093 1 G A scaffold6069 Both SNP 0025.scaffold00096 339181 1 T C scaffold6069 Both SNP 0025.scaffold00096 339206 1 C G scaffold6069 Both SNP 0025.scaffold00096 339371 1 G A scaffold6069 Both SNP 0025.scaffold00096 339470 1 C G scaffold6069 Both INDEL 0025.scaffold00096 339516 1 T . scaffold6069 Both SNP 0025.scaffold00096 339538 1 C T scaffold6069 Both SNP 0025.scaffold00096 339621 1 A C scaffold6069 Both SNP 0025.scaffold00096 339771 1 C G scaffold6069 Both SNP 0025.scaffold00096 339815 1 A C scaffold6069 Both SNP 0025.scaffold00096 339837 1 A C scaffold6069 Both SNP 0025.scaffold00096 339855 1 T C scaffold6069 Both SNP 0025.scaffold00096 339910 1 G A scaffold6069 Both SNP 0025.scaffold00096 339918 1 C T scaffold6069 Both SNP 0025.scaffold00096 339993 1 C T scaffold6069 Both SNP 0025.scaffold00096 339997 1 T A scaffold6069 Both SNP 0025.scaffold00096 340002 1 A T scaffold6069 Both SNP 0025.scaffold00096 340098 1 G T scaffold6069 Both SNP 0025.scaffold00096 340117 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 340155 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 340157 1 A G scaffold6069 ScafM INDEL 0025.scaffold00096 340161 1 T . scaffold6069 ScafM SNP 0025.scaffold00096 340225 1 T A scaffold6069 Both SNP 0025.scaffold00096 340558 1 C T scaffold6069 Both SNP 0025.scaffold00096 340633 1 A G scaffold6069 Both SNP 0025.scaffold00096 340651 1 C A scaffold6069 Both SNP 0025.scaffold00096 340673 1 A C scaffold6069 Both SNP 0025.scaffold00096 340678 1 A C scaffold6069 Both SNP 0025.scaffold00096 340824 1 C T scaffold6069 Both SNP 0025.scaffold00096 340853 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 340962 1 C T scaffold6069 Both SNP 0025.scaffold00096 340972 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 340991 1 . T scaffold6069 ScafM SNP 0025.scaffold00096 341005 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 341025 2 AA CG scaffold6069 ScafM SNP 0025.scaffold00096 341040 1 G T scaffold6069 Both SNP 0025.scaffold00096 341081 1 G A scaffold6069 Both SNP 0025.scaffold00096 341121 1 A T scaffold6069 Both SNP 0025.scaffold00096 341146 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 341164 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 341180 2 TG GT scaffold6069 ScafM SNP 0025.scaffold00096 341200 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 341220 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 341225 2 TG GC scaffold6069 ScafM SNP 0025.scaffold00096 341232 1 T A scaffold6069 Both SNP 0025.scaffold00096 341246 1 C A scaffold6069 Both SNP 0025.scaffold00096 341258 1 G T scaffold6069 Both SNP 0025.scaffold00096 341442 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 341457 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 341484 2 .. AA scaffold6069 ScafM SNP 0025.scaffold00096 341486 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 341489 1 T A scaffold6069 Both SNP 0025.scaffold00096 341521 1 A G scaffold6069 Both SNP 0025.scaffold00096 341573 1 T C scaffold6069 Both SNP 0025.scaffold00096 341609 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 341624 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 341639 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 341650 1 A T scaffold6069 Both SNP 0025.scaffold00096 341687 1 C G scaffold6069 Both SNP 0025.scaffold00096 341705 1 G A scaffold6069 Both SNP 0025.scaffold00096 341728 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 341792 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 341802 2 AC CA scaffold6069 ScafM SNP 0025.scaffold00096 341807 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 341809 2 TG CA scaffold6069 ScafM SNP 0025.scaffold00096 341819 1 C T scaffold6069 Both SNP 0025.scaffold00096 341913 1 G A scaffold6069 Both SNP 0025.scaffold00096 341994 1 T C scaffold6069 Both SNP 0025.scaffold00096 342081 1 T A scaffold6069 Both SNP 0025.scaffold00096 342141 1 C T scaffold6069 ScafM INDEL 0025.scaffold00096 342244 8 TGCCTGAC ........ scaffold6069 ScafM SNP 0025.scaffold00096 342303 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 342781 1 C T scaffold6069 Both SNP 0025.scaffold00096 342824 1 C T scaffold6069 Both SNP 0025.scaffold00096 342845 1 C T scaffold6069 Both SNP 0025.scaffold00096 342864 1 T C scaffold6069 Both INDEL 0025.scaffold00096 342941 2 AC .. scaffold6069 ScafM SNP 0025.scaffold00096 342986 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 343005 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 343040 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 343043 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 343066 1 . A scaffold6069 ScafM SNP 0025.scaffold00096 343074 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 343076 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 343120 1 G C scaffold6069 ScafM SNP 0025.scaffold00096 343127 1 C T scaffold6069 Both SNP 0025.scaffold00096 343194 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 343222 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 343252 1 T G scaffold6069 ScafM SNP 0025.scaffold00096 343259 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 343263 1 T C scaffold6069 ScafM INDEL 0025.scaffold00096 343315 4 .... TTTA scaffold6069 ScafM SNP 0025.scaffold00096 343378 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 343394 2 CA AT scaffold6069 Both SNP 0025.scaffold00096 343407 1 T A scaffold6069 ReadM INDEL 0025.scaffold00096 343431 1 . T - ScafM INDEL 0025.scaffold00096 343431 2 .A TT scaffold6069 Both SNP 0025.scaffold00096 343504 1 C A scaffold6069 Both SNP 0025.scaffold00096 343546 1 A C scaffold6069 Both SNP 0025.scaffold00096 343561 1 G A scaffold6069 ScafM SNP 0025.scaffold00096 343588 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 343615 1 A T scaffold6069 ScafM SNP 0025.scaffold00096 343626 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 343628 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 343631 1 T G scaffold6069 ScafM SNP 0025.scaffold00096 343641 1 C T scaffold6069 Both SNP 0025.scaffold00096 343675 1 C G scaffold6069 ScafM INDEL 0025.scaffold00096 343802 4 .... TTAG scaffold6069 ScafM INDEL 0025.scaffold00096 343803 4 .... CTTT scaffold6069 ScafM SNP 0025.scaffold00096 343823 1 G T scaffold6069 Both SNP 0025.scaffold00096 343963 1 C T scaffold6069 Both SNP 0025.scaffold00096 343967 1 G C scaffold6069 Both SNP 0025.scaffold00096 343975 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 344026 1 G T scaffold6069 ScafM SNP 0025.scaffold00096 344038 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 344047 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 344057 1 T A scaffold6069 ScafM SNP 0025.scaffold00096 344061 1 C G scaffold6069 ScafM SNP 0025.scaffold00096 344067 2 CA TG scaffold6069 ScafM INDEL 0025.scaffold00096 344111 2 .. AA scaffold6069 ScafM SNP 0025.scaffold00096 344113 1 C A scaffold6069 ScafM SNP 0025.scaffold00096 344136 1 A T scaffold6069 ScafM INDEL 0025.scaffold00096 344148 23 ....................... ATGAATGAGAACTTAGGTATTAT scaffold6069 ScafM INDEL 0025.scaffold00096 344150 1 . A scaffold6069 ScafM INDEL 0025.scaffold00096 344152 1 . T scaffold6069 ScafM INDEL 0025.scaffold00096 344153 1 . A scaffold6069 ScafM SNP 0025.scaffold00096 344196 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 344210 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 344216 1 A C scaffold6069 ScafM SNP 0025.scaffold00096 344249 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 344254 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 344257 2 CC GT scaffold6069 ScafM SNP 0025.scaffold00096 344342 1 T A scaffold6069 ScafM INDEL 0025.scaffold00096 344359 2 AA .. scaffold6069 ScafM SNP 0025.scaffold00096 344402 1 C T scaffold6069 ScafM SNP 0025.scaffold00096 344413 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 344484 1 A C scaffold6069 ScafM SNP 0025.scaffold00096 344487 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 344496 2 .. CT scaffold6069 ScafM INDEL 0025.scaffold00096 344499 1 . A scaffold6069 ScafM INDEL 0025.scaffold00096 344500 1 . A scaffold6069 ScafM INDEL 0025.scaffold00096 344502 4 ...T AAGA scaffold6069 Both SNP 0025.scaffold00096 344590 1 T G scaffold6069 Both SNP 0025.scaffold00096 344664 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 344809 1 C T scaffold6069 ScafM INDEL 0025.scaffold00096 344891 1 T . scaffold6069 ScafM INDEL 0025.scaffold00096 344894 1 A . scaffold6069 ScafM INDEL 0025.scaffold00096 344900 32 AATTTCAGTGAACGATAAGCTGACCATCACAT ................................ scaffold6069 ScafM INDEL 0025.scaffold00096 344934 1 C . scaffold6069 ScafM INDEL 0025.scaffold00096 344984 1 . A scaffold6069 ScafM SNP 0025.scaffold00096 344986 1 T A scaffold6069 ScafM INDEL 0025.scaffold00096 345157 5 ..... TCTGT scaffold6069 ScafM INDEL 0025.scaffold00096 345160 4 .... ACCA scaffold6069 ScafM INDEL 0025.scaffold00096 345161 14 .............. AATTTTAATCAAAC scaffold6069 ScafM SNP 0025.scaffold00096 345190 1 T G scaffold6069 ScafM SNP 0025.scaffold00096 345297 1 A G scaffold6069 ScafM SNP 0025.scaffold00096 345310 1 G A scaffold6069 ScafM INDEL 0025.scaffold00096 345334 1 . A scaffold6069 ScafM INDEL 0025.scaffold00096 345356 1 T . scaffold6069 ScafM INDEL 0025.scaffold00096 345458 5 GCCGG ..... scaffold6069 ReadM SNP 0025.scaffold00096 345662 1 G A - ReadM SNP 0025.scaffold00096 345765 1 C T - ReadM SNP 0025.scaffold00096 345808 1 T A - ReadM SNP 0025.scaffold00096 345841 1 A G - ReadM SNP 0025.scaffold00096 345917 1 G T - ReadM SNP 0025.scaffold00096 345982 1 A G - ReadM SNP 0025.scaffold00096 346068 1 A T - ReadM SNP 0025.scaffold00096 346122 1 G A - Both SNP 0025.scaffold00096 346284 1 A G scaffold6069 Both SNP 0025.scaffold00096 346339 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 346508 1 A G scaffold6069 ScafM INDEL 0025.scaffold00096 346555 2 .. GT scaffold6069 ReadM SNP 0025.scaffold00096 347381 1 T G - ReadM SNP 0025.scaffold00096 347389 1 A G - ReadM SNP 0025.scaffold00096 347487 1 C T - ReadM SNP 0025.scaffold00096 347538 1 G T - ReadM SNP 0025.scaffold00096 347619 1 A C - ReadM SNP 0025.scaffold00096 347699 1 T A - ReadM SNP 0025.scaffold00096 347743 1 C T - ReadM SNP 0025.scaffold00096 347780 1 T G - ReadM SNP 0025.scaffold00096 347922 1 C T - ReadM SNP 0025.scaffold00096 348225 1 T C - ReadM SNP 0025.scaffold00096 348266 1 A G - ReadM SNP 0025.scaffold00096 348461 1 G A - ReadM SNP 0025.scaffold00096 348576 1 C T - ReadM SNP 0025.scaffold00096 348780 1 G T - ReadM SNP 0025.scaffold00096 348888 1 C T - ReadM INDEL 0025.scaffold00096 349276 1 . A - ScafM SNP 0025.scaffold00096 349519 1 T C scaffold6069 ScafM SNP 0025.scaffold00096 349561 1 A G scaffold6069 ReadM SNP 0025.scaffold00096 349589 1 T G - ReadM SNP 0025.scaffold00096 349701 1 A G - ReadM SNP 0025.scaffold00096 350065 1 A G - ReadM SNP 0025.scaffold00096 350077 1 A T - ReadM SNP 0025.scaffold00096 350100 1 C T - ReadM SNP 0025.scaffold00096 350362 1 C T - ReadM SNP 0025.scaffold00096 350516 1 C T - ReadM SNP 0025.scaffold00096 350578 1 T C - ReadM SNP 0025.scaffold00096 350620 1 T G - ReadM SNP 0025.scaffold00096 350629 1 C G - ReadM SNP 0025.scaffold00096 350693 1 A G - ReadM SNP 0025.scaffold00096 350934 1 T G - ReadM SNP 0025.scaffold00096 351050 1 C T - ReadM SNP 0025.scaffold00096 354481 1 G A - ReadM SNP 0025.scaffold00096 354686 1 C A - ReadM SNP 0025.scaffold00096 354717 1 C T - ReadM SNP 0025.scaffold00096 354816 1 T C - ScafM SNP 0025.scaffold00096 367599 1 C T scaffold4642 ScafM SNP 0025.scaffold00096 367608 1 A G scaffold4642 ScafM SNP 0025.scaffold00096 367616 1 T G scaffold4642 ScafM SNP 0025.scaffold00096 367622 1 T A scaffold4642 ReadM INDEL 0025.scaffold00096 368943 1 C . - ReadM SNP 0025.scaffold00096 368987 1 T C - ReadM SNP 0025.scaffold00096 369243 1 A G - ReadM SNP 0025.scaffold00096 369252 1 A G - ReadM SNP 0025.scaffold00096 369457 1 A T - ReadM SNP 0025.scaffold00096 369770 1 G T - ReadM SNP 0025.scaffold00096 369924 1 T G - ReadM SNP 0025.scaffold00096 369929 1 C T - ReadM SNP 0025.scaffold00096 370259 1 T C - ReadM SNP 0025.scaffold00096 370273 1 C T - ReadM SNP 0025.scaffold00096 370292 1 G A - ReadM SNP 0025.scaffold00096 370365 1 T G - ReadM SNP 0025.scaffold00096 370440 1 G C - ReadM SNP 0025.scaffold00096 370456 1 T C - ReadM SNP 0025.scaffold00096 370485 1 T C - ReadM SNP 0025.scaffold00096 370574 1 A G - ReadM SNP 0025.scaffold00096 370718 1 T G - ReadM SNP 0025.scaffold00096 371016 1 G A - ReadM INDEL 0025.scaffold00096 372952 1 . A - ReadM SNP 0025.scaffold00096 373101 1 T C - ReadM SNP 0025.scaffold00096 373118 1 T C - ReadM SNP 0025.scaffold00096 373154 1 T C - ReadM SNP 0025.scaffold00096 373192 1 C G - ReadM SNP 0025.scaffold00096 373224 1 G T - Both SNP 0025.scaffold00096 373281 1 A G scaffold4642 Both SNP 0025.scaffold00096 373312 1 A G scaffold4642 Both SNP 0025.scaffold00096 373331 1 T A scaffold4642 Both SNP 0025.scaffold00096 373417 1 C A scaffold4642 ReadM SNP 0025.scaffold00096 373513 1 C T - ReadM SNP 0025.scaffold00096 373535 1 G C - ReadM SNP 0025.scaffold00096 373556 1 T C - ReadM SNP 0025.scaffold00096 373588 1 T G - ReadM SNP 0025.scaffold00096 373687 1 C T - ReadM SNP 0025.scaffold00096 373696 1 A G - ReadM SNP 0025.scaffold00096 379007 1 G A - ReadM SNP 0025.scaffold00096 379225 1 A G - ReadM SNP 0025.scaffold00096 379260 1 C G - ReadM SNP 0025.scaffold00096 379752 1 G T - ReadM SNP 0025.scaffold00096 380049 1 A C - ReadM SNP 0025.scaffold00096 380108 1 T C - ReadM SNP 0025.scaffold00096 380115 1 G C - ReadM SNP 0025.scaffold00096 380359 1 A C - ReadM SNP 0025.scaffold00096 380361 1 A G - ReadM SNP 0025.scaffold00096 380428 1 T C - ReadM SNP 0025.scaffold00096 380535 1 A G - ReadM SNP 0025.scaffold00096 380665 1 C T - ReadM SNP 0025.scaffold00096 380706 1 C T - ReadM SNP 0025.scaffold00096 380733 1 T C - ReadM SNP 0025.scaffold00096 380777 1 A G - ReadM INDEL 0025.scaffold00096 380807 1 . C - ReadM SNP 0025.scaffold00096 381004 1 G C - ReadM SNP 0025.scaffold00096 381087 1 C G - ReadM SNP 0025.scaffold00096 381153 1 T A - ReadM SNP 0025.scaffold00096 381187 1 T C - ReadM SNP 0025.scaffold00096 381408 1 C A - ReadM SNP 0025.scaffold00096 381434 1 T G - ReadM SNP 0025.scaffold00096 381449 1 T G - ReadM SNP 0025.scaffold00096 381503 1 A C - Both SNP 0025.scaffold00096 381592 1 G A scaffold4642 ReadM SNP 0025.scaffold00096 381637 1 A C - ReadM SNP 0025.scaffold00096 381788 1 A G - ReadM SNP 0025.scaffold00096 381900 1 C T - ReadM INDEL 0025.scaffold00096 382065 1 . C - ReadM SNP 0025.scaffold00096 382165 1 T A - ReadM SNP 0025.scaffold00096 382198 1 G A - ReadM SNP 0025.scaffold00096 382445 1 T C - ReadM SNP 0025.scaffold00096 382653 1 A G - ReadM SNP 0025.scaffold00096 382662 1 T A - ReadM SNP 0025.scaffold00096 382724 1 G A - ReadM SNP 0025.scaffold00096 382776 1 T G - ReadM SNP 0025.scaffold00096 382791 1 G A - ReadM SNP 0025.scaffold00096 382842 1 T C - ReadM SNP 0025.scaffold00096 382911 1 A C - ReadM SNP 0025.scaffold00096 382916 1 T C - Both SNP 0025.scaffold00096 382952 1 G C scaffold4642 ScafM SNP 0025.scaffold00096 383028 1 C T scaffold4642 ReadM SNP 0025.scaffold00096 383516 1 A C - ReadM SNP 0025.scaffold00096 383921 1 T G - ReadM SNP 0025.scaffold00096 384136 1 G T - ReadM SNP 0025.scaffold00096 384298 1 A C - ReadM SNP 0025.scaffold00096 384334 1 A T - ReadM SNP 0025.scaffold00096 384408 1 T C - ReadM SNP 0025.scaffold00096 384422 1 G T - ReadM SNP 0025.scaffold00096 384479 1 C T - Both SNP 0025.scaffold00096 384599 1 G C scaffold4642 Both SNP 0025.scaffold00096 384608 1 T C scaffold4642 ReadM SNP 0025.scaffold00096 384719 1 A C - ReadM SNP 0025.scaffold00096 384767 1 G T - Both SNP 0025.scaffold00096 384806 1 T C scaffold4642 Both SNP 0025.scaffold00096 384808 1 G C scaffold4642 Both SNP 0025.scaffold00096 384933 1 T G scaffold4642 Both SNP 0025.scaffold00096 385055 1 A G scaffold4642 Both SNP 0025.scaffold00096 385082 1 T G scaffold4642 ReadM SNP 0025.scaffold00096 385249 1 C A - ReadM SNP 0025.scaffold00096 385257 1 T C - ReadM SNP 0025.scaffold00096 385329 1 C T - ReadM INDEL 0025.scaffold00096 385384 1 . A - ReadM SNP 0025.scaffold00096 385514 1 T C - ReadM SNP 0025.scaffold00096 385594 1 A G - Both SNP 0025.scaffold00096 385712 1 C A scaffold4642 Both SNP 0025.scaffold00096 385769 1 G A scaffold4642 Both SNP 0025.scaffold00096 385835 1 C G scaffold4642 Both SNP 0025.scaffold00096 385863 1 A T scaffold4642 Both SNP 0025.scaffold00096 386031 1 A G scaffold4642 ReadM SNP 0025.scaffold00096 386088 1 T A - ReadM INDEL 0025.scaffold00096 386095 1 . T - ReadM SNP 0025.scaffold00096 386131 1 C T - ReadM SNP 0025.scaffold00096 386221 1 T C - ReadM SNP 0025.scaffold00096 386291 1 T G - ReadM SNP 0025.scaffold00096 386334 1 T C - ReadM SNP 0025.scaffold00096 386366 1 G A - ReadM SNP 0025.scaffold00096 386524 1 G A - ReadM SNP 0025.scaffold00096 386536 1 G A - Both SNP 0025.scaffold00096 386629 1 T C scaffold4642 Both SNP 0025.scaffold00096 386654 1 C T scaffold4642 Both SNP 0025.scaffold00096 386670 1 A G scaffold4642 ReadM SNP 0025.scaffold00096 386835 1 T G - ReadM SNP 0025.scaffold00096 386908 1 G A - ReadM SNP 0025.scaffold00096 387030 1 C G - ReadM SNP 0025.scaffold00096 387071 1 G C - ReadM SNP 0025.scaffold00096 387086 1 A G - ReadM SNP 0025.scaffold00096 387265 1 C A - ReadM SNP 0025.scaffold00096 387323 1 G A - ReadM SNP 0025.scaffold00096 387335 1 A C - ReadM SNP 0025.scaffold00096 387372 1 G A - ReadM SNP 0025.scaffold00096 387431 1 A G - ReadM SNP 0025.scaffold00096 387460 1 G A - ReadM SNP 0025.scaffold00096 387464 1 T C - ReadM SNP 0025.scaffold00096 387484 1 T C - ReadM SNP 0025.scaffold00096 387747 1 C T - ReadM SNP 0025.scaffold00096 387885 1 T C - ReadM SNP 0025.scaffold00096 387949 1 T G - ReadM SNP 0025.scaffold00096 387953 1 C T - ReadM INDEL 0025.scaffold00096 388087 1 . T - ReadM SNP 0025.scaffold00096 388095 1 T C - ReadM SNP 0025.scaffold00096 388161 1 C T - ReadM SNP 0025.scaffold00096 388211 1 G C - ReadM SNP 0025.scaffold00096 388217 1 T A - ReadM SNP 0025.scaffold00096 388236 1 G A - ReadM SNP 0025.scaffold00096 388337 1 T C - ReadM SNP 0025.scaffold00096 388424 1 A G - ReadM SNP 0025.scaffold00096 388451 1 T G - ReadM SNP 0025.scaffold00096 388501 1 G A - ReadM SNP 0025.scaffold00096 388509 1 G A - ReadM SNP 0025.scaffold00096 388547 1 G A - ReadM SNP 0025.scaffold00096 388696 1 C A - ReadM SNP 0025.scaffold00096 389152 1 G A - ReadM INDEL 0025.scaffold00096 389212 1 . A - ReadM SNP 0025.scaffold00096 389283 1 G A - ReadM SNP 0025.scaffold00096 390496 1 G A - Both SNP 0025.scaffold00096 390586 1 A T scaffold4642 ReadM SNP 0025.scaffold00096 390685 1 C T - ReadM SNP 0025.scaffold00096 390711 1 T G - ReadM SNP 0025.scaffold00096 390744 1 C T - ReadM INDEL 0025.scaffold00096 390850 1 . T - ReadM SNP 0025.scaffold00096 391027 1 T A - ReadM SNP 0025.scaffold00096 391193 1 T C - ReadM SNP 0025.scaffold00096 391231 1 C G - ReadM SNP 0025.scaffold00096 391360 1 T C - ReadM SNP 0025.scaffold00096 391411 1 T C - ReadM SNP 0025.scaffold00096 391537 1 C T - ReadM SNP 0025.scaffold00096 391627 1 T C - ReadM SNP 0025.scaffold00096 391680 1 T C - ReadM SNP 0025.scaffold00096 391694 1 C T - ReadM SNP 0025.scaffold00096 391997 1 T C - ReadM SNP 0025.scaffold00096 392045 1 G A - ReadM INDEL 0026.scaffold00103 319 1 A . - ReadM SNP 0026.scaffold00103 744 1 A T - ReadM SNP 0026.scaffold00103 864 1 A T - ReadM SNP 0026.scaffold00103 890 1 C T - ScafM SNP 0026.scaffold00103 1087 1 C A scaffold901 ScafM SNP 0026.scaffold00103 1101 1 G T scaffold901 ScafM SNP 0026.scaffold00103 1106 1 C T scaffold901 ScafM SNP 0026.scaffold00103 1132 1 G T scaffold901 Both SNP 0026.scaffold00103 1265 1 G A scaffold901 Both SNP 0026.scaffold00103 1285 1 A T scaffold901 ReadM SNP 0026.scaffold00103 1772 1 C A - ReadM SNP 0026.scaffold00103 1827 1 A C - ReadM SNP 0026.scaffold00103 1918 1 G A - ReadM SNP 0026.scaffold00103 2057 1 T A - ReadM SNP 0026.scaffold00103 2268 1 T C - ReadM SNP 0026.scaffold00103 2312 1 T G - ReadM SNP 0026.scaffold00103 2402 1 G T - ReadM SNP 0026.scaffold00103 2983 1 T G - ReadM SNP 0026.scaffold00103 3059 1 A C - ReadM SNP 0026.scaffold00103 3287 1 T C - ReadM SNP 0026.scaffold00103 3353 1 A G - ReadM SNP 0026.scaffold00103 3537 1 A G - ScafM SNP 0026.scaffold00103 3593 1 T C scaffold901 ScafM SNP 0026.scaffold00103 3644 1 T A scaffold901 Both SNP 0026.scaffold00103 3957 1 C T scaffold901 ScafM SNP 0026.scaffold00103 4091 1 A C scaffold901 ScafM SNP 0026.scaffold00103 4319 1 T G scaffold901 ScafM SNP 0026.scaffold00103 4327 1 C G scaffold901 ScafM SNP 0026.scaffold00103 4393 1 C T scaffold901 Both SNP 0026.scaffold00103 4580 1 G T scaffold901 Both SNP 0026.scaffold00103 4607 1 C T scaffold901 Both SNP 0026.scaffold00103 4641 1 G A scaffold901 Both SNP 0026.scaffold00103 4714 1 G A scaffold901 Both SNP 0026.scaffold00103 4716 1 T C scaffold901 Both SNP 0026.scaffold00103 4737 1 T C scaffold901 Both SNP 0026.scaffold00103 4829 1 T G scaffold901 Both INDEL 0026.scaffold00103 4930 1 . A scaffold901 ScafM INDEL 0026.scaffold00103 4983 1 A . scaffold901 ScafM INDEL 0026.scaffold00103 4989 4 .... TAAT scaffold901 ScafM INDEL 0026.scaffold00103 5073 8 TCAAAAAA .......G scaffold901 ScafM SNP 0026.scaffold00103 5112 1 C G scaffold901 Both SNP 0026.scaffold00103 5155 1 T A scaffold901 Both SNP 0026.scaffold00103 5181 1 T C scaffold901 Both SNP 0026.scaffold00103 5303 1 G T scaffold901 Both SNP 0026.scaffold00103 5351 1 T G scaffold901 Both SNP 0026.scaffold00103 5358 1 A G scaffold901 Both SNP 0026.scaffold00103 5409 1 G A scaffold901 Both SNP 0026.scaffold00103 5418 1 G A scaffold901 Both SNP 0026.scaffold00103 5488 1 C G scaffold901 ReadM SNP 0026.scaffold00103 5549 1 G C - ReadM SNP 0026.scaffold00103 5699 1 G C - Both SNP 0026.scaffold00103 5861 1 T C scaffold901 Both SNP 0026.scaffold00103 6082 1 A G scaffold901 Both SNP 0026.scaffold00103 6144 1 G C scaffold901 ScafM INDEL 0026.scaffold00103 6192 1 A . scaffold901 ScafM INDEL 0026.scaffold00103 6217 25 GATATGTAATTTATGTTCTTGACAC ......................... scaffold901 Both SNP 0026.scaffold00103 6495 1 A G scaffold901 Both SNP 0026.scaffold00103 6531 1 G A scaffold901 ReadM SNP 0026.scaffold00103 6651 1 A T - ScafM SNP 0026.scaffold00103 6798 1 T G scaffold901 ScafM INDEL 0026.scaffold00103 6973 1 A . scaffold901 Both SNP 0026.scaffold00103 7067 1 T C scaffold901 ReadM SNP 0026.scaffold00103 7253 1 C T - ScafM INDEL 0026.scaffold00103 7325 1 . T scaffold901 ScafM INDEL 0026.scaffold00103 7373 1 T . scaffold901 ReadM SNP 0026.scaffold00103 7593 1 T C - ReadM SNP 0026.scaffold00103 7826 1 A T - ReadM SNP 0026.scaffold00103 7872 1 C T - ReadM SNP 0026.scaffold00103 7940 1 G A - ReadM SNP 0026.scaffold00103 7976 1 T C - ReadM SNP 0026.scaffold00103 8089 1 G A - ReadM SNP 0026.scaffold00103 8285 1 C T - ReadM SNP 0026.scaffold00103 8400 1 A G - ReadM SNP 0026.scaffold00103 8595 1 G A - ReadM SNP 0026.scaffold00103 8854 1 A T - ReadM SNP 0026.scaffold00103 9138 1 G A - ReadM SNP 0026.scaffold00103 9159 1 G A - ReadM SNP 0026.scaffold00103 9247 1 G A - ReadM SNP 0026.scaffold00103 9270 1 T G - ReadM SNP 0026.scaffold00103 9349 1 A G - ReadM INDEL 0026.scaffold00103 9456 1 . C - ReadM SNP 0026.scaffold00103 9505 1 G A - ReadM SNP 0026.scaffold00103 9512 1 G A - ReadM SNP 0026.scaffold00103 9604 1 C T - ReadM SNP 0026.scaffold00103 9627 1 A G - ReadM SNP 0026.scaffold00103 9776 1 A T - ReadM SNP 0026.scaffold00103 9869 1 G T - ReadM SNP 0026.scaffold00103 9912 1 G A - ReadM SNP 0026.scaffold00103 9957 1 C A - ReadM SNP 0026.scaffold00103 10006 1 G A - ReadM SNP 0026.scaffold00103 10233 1 G A - ReadM SNP 0026.scaffold00103 10276 1 T C - ReadM SNP 0026.scaffold00103 10386 1 G A - ReadM SNP 0026.scaffold00103 10501 1 A G - ReadM SNP 0026.scaffold00103 10576 1 G A - ReadM SNP 0026.scaffold00103 10873 1 T C - ReadM INDEL 0026.scaffold00103 10901 1 A . - ReadM SNP 0026.scaffold00103 10949 1 A T - ReadM SNP 0026.scaffold00103 11095 1 G A - ReadM SNP 0026.scaffold00103 11379 1 G C - ReadM SNP 0026.scaffold00103 11518 1 T C - ReadM SNP 0026.scaffold00103 11806 1 T C - ReadM SNP 0026.scaffold00103 11811 1 C A - ReadM SNP 0026.scaffold00103 12183 1 T A - ReadM SNP 0026.scaffold00103 12270 1 T G - ReadM SNP 0026.scaffold00103 12541 1 T A - ReadM SNP 0026.scaffold00103 12569 1 C G - ReadM SNP 0026.scaffold00103 12583 1 C A - ReadM SNP 0026.scaffold00103 12758 1 G A - ReadM SNP 0026.scaffold00103 12778 1 G C - ScafM SNP 0026.scaffold00103 13300 1 G A scaffold901 ScafM SNP 0026.scaffold00103 13313 1 A C scaffold901 ScafM INDEL 0026.scaffold00103 13398 1 A . scaffold901 ScafM SNP 0026.scaffold00103 13400 1 A C scaffold901 ScafM SNP 0026.scaffold00103 13402 1 T C scaffold901 ScafM SNP 0026.scaffold00103 13430 1 G C scaffold901 ScafM SNP 0026.scaffold00103 13447 1 G A scaffold901 ScafM SNP 0026.scaffold00103 13485 1 G A scaffold901 ReadM SNP 0026.scaffold00103 14628 1 C A - ReadM INDEL 0026.scaffold00103 14768 2 .. AT - ReadM SNP 0026.scaffold00103 14893 1 G A - ReadM SNP 0026.scaffold00103 14926 1 C T - ReadM SNP 0026.scaffold00103 15113 1 A G - ReadM SNP 0026.scaffold00103 15128 1 A T - ReadM SNP 0026.scaffold00103 15846 1 G A - ReadM SNP 0026.scaffold00103 15990 1 A T - ReadM SNP 0026.scaffold00103 16087 1 A G - ReadM SNP 0026.scaffold00103 16106 1 C A - ReadM SNP 0026.scaffold00103 16590 1 A C - ReadM SNP 0026.scaffold00103 16599 1 G T - ReadM SNP 0026.scaffold00103 16727 1 C G - ReadM SNP 0026.scaffold00103 16748 1 G T - ReadM SNP 0026.scaffold00103 16755 1 C T - ReadM SNP 0026.scaffold00103 17519 1 A C - ReadM SNP 0026.scaffold00103 17629 1 G C - ReadM SNP 0026.scaffold00103 17704 1 C A - ReadM SNP 0026.scaffold00103 17716 1 A G - ReadM SNP 0026.scaffold00103 17719 1 T G - ReadM INDEL 0026.scaffold00103 17842 2 AA .. - ReadM SNP 0026.scaffold00103 18115 1 T C - ReadM SNP 0026.scaffold00103 18255 1 A G - ReadM SNP 0026.scaffold00103 18272 1 C G - ReadM SNP 0026.scaffold00103 18277 1 A T - ReadM SNP 0026.scaffold00103 18331 1 G A - ReadM SNP 0026.scaffold00103 18358 1 T C - ReadM SNP 0026.scaffold00103 18374 1 T G - ReadM SNP 0026.scaffold00103 18420 1 C A - ReadM INDEL 0026.scaffold00103 18500 1 G . - ReadM SNP 0026.scaffold00103 18751 1 C A - ReadM SNP 0026.scaffold00103 18821 1 C T - ReadM SNP 0026.scaffold00103 18922 1 A G - ReadM SNP 0026.scaffold00103 19166 1 A C - ReadM SNP 0026.scaffold00103 19216 1 C T - ReadM SNP 0026.scaffold00103 19282 1 C T - ReadM SNP 0026.scaffold00103 19321 1 G A - ReadM SNP 0026.scaffold00103 19377 1 G C - ReadM SNP 0026.scaffold00103 19392 1 A G - ReadM SNP 0026.scaffold00103 19458 1 G A - ReadM SNP 0026.scaffold00103 19528 1 T C - ReadM SNP 0026.scaffold00103 19539 1 G A - ScafM INDEL 0026.scaffold00103 19664 38 ...................................... GCAGCAACTGGGGCGAAACATAGAGGCTTATATTGATG scaffold901 Both SNP 0026.scaffold00103 19714 1 G A scaffold901 ReadM SNP 0026.scaffold00103 19805 1 T C - Both SNP 0026.scaffold00103 19864 1 A G scaffold901 ReadM SNP 0026.scaffold00103 19962 1 T C - ReadM SNP 0026.scaffold00103 20306 1 C T - ReadM SNP 0026.scaffold00103 20452 1 G T - ReadM SNP 0026.scaffold00103 20780 1 T C - ReadM SNP 0026.scaffold00103 20944 1 C T - ReadM SNP 0026.scaffold00103 20977 1 G A - ReadM SNP 0026.scaffold00103 21031 1 A G - ReadM SNP 0026.scaffold00103 21186 1 G C - ReadM SNP 0026.scaffold00103 21282 1 C A - ReadM SNP 0026.scaffold00103 21306 1 G C - ReadM SNP 0026.scaffold00103 21453 1 C A - ReadM SNP 0026.scaffold00103 21526 1 A G - ScafM INDEL 0026.scaffold00103 21657 4 ATCG .... scaffold901 ReadM SNP 0026.scaffold00103 21736 1 C T - ReadM SNP 0026.scaffold00103 21738 1 A G - ReadM SNP 0026.scaffold00103 21793 1 A G - ReadM SNP 0026.scaffold00103 21925 1 C G - ReadM SNP 0026.scaffold00103 22243 1 C G - Both SNP 0026.scaffold00103 22507 1 A G scaffold901 ReadM SNP 0026.scaffold00103 22574 1 A G - ReadM INDEL 0026.scaffold00103 22587 2 TA .. - Both SNP 0026.scaffold00103 22647 1 A T scaffold901 ScafM SNP 0026.scaffold00103 22769 1 T C scaffold901 ScafM SNP 0026.scaffold00103 23000 1 A T scaffold901 ScafM SNP 0026.scaffold00103 23028 1 G A scaffold901 Both SNP 0026.scaffold00103 23119 1 A C scaffold901 Both SNP 0026.scaffold00103 23189 1 A T scaffold901 Both SNP 0026.scaffold00103 23244 1 G A scaffold901 ReadM SNP 0026.scaffold00103 23531 1 A T - ReadM SNP 0026.scaffold00103 23587 1 C T - ScafM SNP 0026.scaffold00103 23992 1 G T scaffold901 ScafM SNP 0026.scaffold00103 23997 1 G A scaffold901 ScafM SNP 0026.scaffold00103 24005 1 C T scaffold901 ScafM SNP 0026.scaffold00103 24088 1 C G scaffold901 Both SNP 0026.scaffold00103 24099 1 T C scaffold901 Both SNP 0026.scaffold00103 24196 1 G A scaffold901 Both SNP 0026.scaffold00103 24301 1 C A scaffold901 ScafM SNP 0026.scaffold00103 24375 1 T A scaffold901 ScafM SNP 0026.scaffold00103 24431 1 A C scaffold901 ScafM SNP 0026.scaffold00103 24442 1 A T scaffold901 ScafM SNP 0026.scaffold00103 24516 1 T G scaffold901 ScafM SNP 0026.scaffold00103 24543 1 G T scaffold901 ScafM SNP 0026.scaffold00103 24618 1 T C scaffold901 Both SNP 0026.scaffold00103 24641 1 T G scaffold901 Both SNP 0026.scaffold00103 24735 1 G C scaffold901 Both SNP 0026.scaffold00103 24826 1 A T scaffold901 Both SNP 0026.scaffold00103 24865 1 C T scaffold901 ReadM SNP 0026.scaffold00103 25123 1 G T - Both SNP 0026.scaffold00103 25262 1 T A scaffold901 Both SNP 0026.scaffold00103 25315 1 C G scaffold901 Both SNP 0026.scaffold00103 25335 1 A G scaffold901 Both SNP 0026.scaffold00103 25557 1 G A scaffold901 ScafM SNP 0026.scaffold00103 25613 1 A G scaffold901 ScafM SNP 0026.scaffold00103 25619 1 T A scaffold901 ScafM SNP 0026.scaffold00103 25623 1 G C scaffold901 ScafM SNP 0026.scaffold00103 25628 1 A C scaffold901 Both SNP 0026.scaffold00103 25768 1 T C scaffold901 Both SNP 0026.scaffold00103 25806 1 A G scaffold901 Both SNP 0026.scaffold00103 25814 1 G C scaffold901 Both SNP 0026.scaffold00103 25853 1 C T scaffold901 ScafM SNP 0026.scaffold00103 25869 1 C A scaffold901 ScafM SNP 0026.scaffold00103 25903 1 G T scaffold901 Both SNP 0026.scaffold00103 26107 1 G T scaffold901 Both SNP 0026.scaffold00103 26131 1 G T scaffold901 Both SNP 0026.scaffold00103 26179 1 A G scaffold901 Both SNP 0026.scaffold00103 26238 1 T C scaffold901 Both SNP 0026.scaffold00103 26282 1 G A scaffold901 Both INDEL 0026.scaffold00103 26327 1 G . scaffold901 Both SNP 0026.scaffold00103 26329 1 G A scaffold901 Both SNP 0026.scaffold00103 26452 1 T G scaffold901 ScafM SNP 0026.scaffold00103 26586 2 CT TC scaffold901 Both SNP 0026.scaffold00103 26660 1 A G scaffold901 Both SNP 0026.scaffold00103 26721 1 C T scaffold901 Both SNP 0026.scaffold00103 26784 1 A G scaffold901 Both SNP 0026.scaffold00103 26959 1 A C scaffold901 Both INDEL 0026.scaffold00103 26999 1 . A scaffold901 Both SNP 0026.scaffold00103 27034 1 T C scaffold901 Both SNP 0026.scaffold00103 27106 1 G A scaffold901 Both SNP 0026.scaffold00103 27120 1 G A scaffold901 Both SNP 0026.scaffold00103 27205 1 T C scaffold901 Both SNP 0026.scaffold00103 27529 1 A G scaffold901 Both SNP 0026.scaffold00103 27542 1 C T scaffold901 ScafM SNP 0026.scaffold00103 27583 1 A G scaffold901 ScafM SNP 0026.scaffold00103 27598 1 A G scaffold901 ScafM SNP 0026.scaffold00103 27605 1 G A scaffold901 Both SNP 0026.scaffold00103 27636 1 T C scaffold901 Both SNP 0026.scaffold00103 27752 1 G C scaffold901 Both SNP 0026.scaffold00103 27832 1 G T scaffold901 Both SNP 0026.scaffold00103 27863 1 G A scaffold901 Both SNP 0026.scaffold00103 27889 1 T G scaffold901 Both SNP 0026.scaffold00103 27904 1 A T scaffold901 Both SNP 0026.scaffold00103 27926 1 A G scaffold901 Both SNP 0026.scaffold00103 27974 1 T C scaffold901 Both SNP 0026.scaffold00103 28006 1 T A scaffold901 Both SNP 0026.scaffold00103 28207 1 A T scaffold901 Both SNP 0026.scaffold00103 28219 1 C T scaffold901 Both SNP 0026.scaffold00103 28241 1 G T scaffold901 Both SNP 0026.scaffold00103 28267 1 T C scaffold901 Both SNP 0026.scaffold00103 28353 1 C T scaffold901 Both SNP 0026.scaffold00103 28471 1 C T scaffold901 Both SNP 0026.scaffold00103 28506 1 T C scaffold901 Both SNP 0026.scaffold00103 28525 1 T C scaffold901 Both SNP 0026.scaffold00103 28534 1 A G scaffold901 Both SNP 0026.scaffold00103 28736 1 C G scaffold901 Both SNP 0026.scaffold00103 28858 1 A G scaffold901 Both SNP 0026.scaffold00103 29139 1 T C scaffold901 Both SNP 0026.scaffold00103 29170 1 A G scaffold901 Both SNP 0026.scaffold00103 29228 1 T C scaffold901 Both SNP 0026.scaffold00103 29565 1 G T scaffold901 Both SNP 0026.scaffold00103 29678 1 A G scaffold901 Both SNP 0026.scaffold00103 29733 1 G A scaffold901 Both SNP 0026.scaffold00103 29765 1 T C scaffold901 ScafM SNP 0026.scaffold00103 29796 1 A T scaffold901 ScafM SNP 0026.scaffold00103 29823 1 A G scaffold901 ScafM SNP 0026.scaffold00103 29829 1 C T scaffold901 ScafM SNP 0026.scaffold00103 29832 1 A G scaffold901 ScafM INDEL 0026.scaffold00103 29872 1 . G scaffold901 Both SNP 0026.scaffold00103 29919 1 G A scaffold901 Both SNP 0026.scaffold00103 29997 1 T G scaffold901 Both SNP 0026.scaffold00103 30164 1 T C scaffold901 ReadM SNP 0026.scaffold00103 30184 1 G A - ReadM SNP 0026.scaffold00103 30238 1 A G - Both SNP 0026.scaffold00103 30311 1 A G scaffold901 Both SNP 0026.scaffold00103 30418 1 A T scaffold901 Both SNP 0026.scaffold00103 30491 1 G A scaffold901 ReadM INDEL 0026.scaffold00103 30533 1 G . - Both SNP 0026.scaffold00103 30838 1 C T scaffold901 Both SNP 0026.scaffold00103 30840 1 A G scaffold901 Both SNP 0026.scaffold00103 30880 1 C T scaffold901 Both SNP 0026.scaffold00103 30884 1 A C scaffold901 ScafM SNP 0026.scaffold00103 31391 1 C G scaffold901 ReadM SNP 0026.scaffold00103 31718 1 T G - ReadM SNP 0026.scaffold00103 31797 1 A G - ReadM SNP 0026.scaffold00103 31920 1 G A - ReadM SNP 0026.scaffold00103 31927 1 A G - ReadM SNP 0026.scaffold00103 31970 1 T C - ReadM SNP 0026.scaffold00103 32131 1 G T - ReadM SNP 0026.scaffold00103 32159 1 A G - ReadM SNP 0026.scaffold00103 32162 1 A C - ReadM SNP 0026.scaffold00103 32407 1 G A - ReadM SNP 0026.scaffold00103 32444 1 G A - ReadM SNP 0026.scaffold00103 32553 1 G T - ReadM SNP 0026.scaffold00103 32569 1 G A - ReadM SNP 0026.scaffold00103 32606 2 CG TA - ReadM SNP 0026.scaffold00103 32754 1 G A - ReadM SNP 0026.scaffold00103 33056 1 C T - ReadM SNP 0026.scaffold00103 33095 1 C T - ReadM SNP 0026.scaffold00103 33221 1 A G - ReadM SNP 0026.scaffold00103 33406 1 T G - ReadM SNP 0026.scaffold00103 33568 1 G A - ReadM INDEL 0026.scaffold00103 33621 1 . A - ReadM SNP 0026.scaffold00103 33641 1 G A - ReadM SNP 0026.scaffold00103 33650 1 G A - ReadM INDEL 0026.scaffold00103 33768 1 A . - ReadM SNP 0026.scaffold00103 33818 1 T G - ReadM SNP 0026.scaffold00103 33943 1 G T - ReadM SNP 0026.scaffold00103 33966 1 G A - ReadM SNP 0026.scaffold00103 34040 1 G T - ReadM SNP 0026.scaffold00103 34095 1 G A - ReadM SNP 0026.scaffold00103 34250 1 T G - ReadM SNP 0026.scaffold00103 34279 1 T A - ReadM SNP 0026.scaffold00103 34464 1 T G - ReadM SNP 0026.scaffold00103 34644 1 G A - ReadM SNP 0026.scaffold00103 34740 1 T G - ReadM SNP 0026.scaffold00103 34771 1 G A - ReadM SNP 0026.scaffold00103 34840 1 T C - ReadM SNP 0026.scaffold00103 34853 1 C T - ReadM SNP 0026.scaffold00103 34866 1 A C - ReadM SNP 0026.scaffold00103 34972 1 C T - ReadM SNP 0026.scaffold00103 34977 1 G A - ReadM SNP 0026.scaffold00103 35129 1 A G - ReadM SNP 0026.scaffold00103 35192 1 C T - ReadM SNP 0026.scaffold00103 35255 1 G A - ReadM SNP 0026.scaffold00103 35279 1 A C - ReadM SNP 0026.scaffold00103 35300 1 A C - ReadM SNP 0026.scaffold00103 35507 1 T G - ReadM SNP 0026.scaffold00103 35533 1 T A - ReadM SNP 0026.scaffold00103 35631 1 T A - ReadM INDEL 0026.scaffold00103 35660 2 .. TG - ReadM SNP 0026.scaffold00103 35743 1 A T - ReadM SNP 0026.scaffold00103 35789 1 T G - ReadM SNP 0026.scaffold00103 35799 1 C T - ReadM SNP 0026.scaffold00103 35852 1 T C - ReadM SNP 0026.scaffold00103 35930 1 C T - ReadM SNP 0026.scaffold00103 35977 1 G T - ReadM SNP 0026.scaffold00103 35979 1 G C - ReadM SNP 0026.scaffold00103 36130 1 C T - ReadM SNP 0026.scaffold00103 36137 1 G A - ReadM SNP 0026.scaffold00103 36200 1 C T - Both INDEL 0026.scaffold00103 36476 1 T . scaffold901 ScafM SNP 0026.scaffold00103 36506 2 AT TC scaffold901 ScafM SNP 0026.scaffold00103 36531 1 G T scaffold901 ScafM SNP 0026.scaffold00103 36560 1 G C scaffold901 Both SNP 0026.scaffold00103 36638 1 C A scaffold901 Both SNP 0026.scaffold00103 36803 1 A G scaffold901 Both SNP 0026.scaffold00103 36937 1 C A scaffold901 ScafM SNP 0026.scaffold00103 37042 1 T A scaffold901 ScafM INDEL 0026.scaffold00103 37052 9 TTGTTCTTG ......... scaffold901 Both SNP 0026.scaffold00103 37149 1 C G scaffold901 Both INDEL 0026.scaffold00103 37150 1 . A scaffold901 Both SNP 0026.scaffold00103 37181 1 C T scaffold901 Both SNP 0026.scaffold00103 37194 1 C G scaffold901 Both INDEL 0026.scaffold00103 37320 1 . A scaffold901 Both SNP 0026.scaffold00103 37510 1 A T scaffold901 Both SNP 0026.scaffold00103 37526 1 G C scaffold901 Both SNP 0026.scaffold00103 37590 1 T G scaffold901 Both SNP 0026.scaffold00103 37683 1 G A scaffold901 Both SNP 0026.scaffold00103 37696 1 G A scaffold901 ReadM SNP 0026.scaffold00103 37911 1 C T - ReadM SNP 0026.scaffold00103 37922 1 C T - ReadM SNP 0026.scaffold00103 37961 1 C T - ReadM SNP 0026.scaffold00103 38340 1 G T - ReadM SNP 0026.scaffold00103 38511 1 T G - ReadM SNP 0026.scaffold00103 38517 1 T C - ReadM SNP 0026.scaffold00103 38585 1 A G - ReadM SNP 0026.scaffold00103 38608 1 C T - ReadM SNP 0026.scaffold00103 38623 1 T C - ReadM SNP 0026.scaffold00103 38734 1 C T - ReadM SNP 0026.scaffold00103 38736 1 A G - ReadM SNP 0026.scaffold00103 38745 1 A G - ReadM SNP 0026.scaffold00103 38800 1 C G - ReadM SNP 0026.scaffold00103 38833 1 G T - ReadM SNP 0026.scaffold00103 38862 1 T C - ReadM SNP 0026.scaffold00103 38963 1 C G - ReadM SNP 0026.scaffold00103 39006 1 A G - ReadM SNP 0026.scaffold00103 39063 1 A G - ReadM SNP 0026.scaffold00103 39152 1 A C - ReadM SNP 0026.scaffold00103 39181 1 G A - ReadM SNP 0026.scaffold00103 39388 1 G T - ReadM SNP 0026.scaffold00103 39427 1 C T - ReadM SNP 0026.scaffold00103 39709 1 G A - ReadM INDEL 0026.scaffold00103 39920 1 . G - ReadM SNP 0026.scaffold00103 40001 1 T G - ReadM SNP 0026.scaffold00103 40093 1 T C - ReadM SNP 0026.scaffold00103 40208 1 C G - ReadM SNP 0026.scaffold00103 40265 1 T C - ReadM SNP 0026.scaffold00103 40269 1 C T - ReadM SNP 0026.scaffold00103 40299 1 T G - ReadM SNP 0026.scaffold00103 40483 1 G A - ReadM SNP 0026.scaffold00103 40611 1 T C - ReadM SNP 0026.scaffold00103 40700 1 G A - ReadM SNP 0026.scaffold00103 40712 1 C A - ReadM SNP 0026.scaffold00103 40780 1 G C - ReadM SNP 0026.scaffold00103 40871 1 C G - ReadM SNP 0026.scaffold00103 41011 1 G T - ReadM SNP 0026.scaffold00103 41063 1 T C - ReadM SNP 0026.scaffold00103 41141 1 C G - ReadM SNP 0026.scaffold00103 41144 1 A G - ReadM SNP 0026.scaffold00103 41266 1 G A - ReadM SNP 0026.scaffold00103 41280 1 T C - ReadM SNP 0026.scaffold00103 41308 1 T C - ReadM SNP 0026.scaffold00103 41344 1 T A - ReadM SNP 0026.scaffold00103 41383 1 T C - ReadM SNP 0026.scaffold00103 41434 1 G A - ReadM SNP 0026.scaffold00103 41450 1 C T - ReadM SNP 0026.scaffold00103 41559 1 A G - ReadM SNP 0026.scaffold00103 41710 1 A T - ReadM SNP 0026.scaffold00103 41919 1 G T - ReadM SNP 0026.scaffold00103 42186 1 C G - ReadM INDEL 0026.scaffold00103 42197 1 . A - ReadM SNP 0026.scaffold00103 42236 1 T G - Both SNP 0026.scaffold00103 42410 1 C T scaffold901 Both SNP 0026.scaffold00103 42421 1 C A scaffold901 Both SNP 0026.scaffold00103 42618 1 T C scaffold901 Both SNP 0026.scaffold00103 42639 1 C T scaffold901 Both SNP 0026.scaffold00103 42690 1 C T scaffold901 Both SNP 0026.scaffold00103 42778 1 A G scaffold901 Both SNP 0026.scaffold00103 42987 1 G C scaffold901 Both SNP 0026.scaffold00103 42990 1 T A scaffold901 Both SNP 0026.scaffold00103 43047 1 C A scaffold901 ScafM SNP 0026.scaffold00103 43062 1 A G scaffold901 ScafM INDEL 0026.scaffold00103 43272 4 .... TCCA scaffold901 ScafM SNP 0026.scaffold00103 44018 1 A G scaffold18145 ScafM INDEL 0026.scaffold00103 44021 5 CAAGG ..... scaffold18145 ScafM INDEL 0026.scaffold00103 44027 1 T . scaffold18145 ScafM SNP 0026.scaffold00103 44035 1 A G scaffold18145 ScafM INDEL 0026.scaffold00103 44046 1 . A scaffold18145 ScafM SNP 0026.scaffold00103 44111 1 C T scaffold18145 ScafM SNP 0026.scaffold00103 44164 1 A G scaffold18145 ScafM SNP 0026.scaffold00103 45843 1 T G scaffold901 ScafM SNP 0026.scaffold00103 45947 1 G A scaffold901 ScafM SNP 0026.scaffold00103 45958 1 A T scaffold901 Both SNP 0026.scaffold00103 46061 1 C T scaffold901 ScafM INDEL 0026.scaffold00103 46154 1 . A scaffold901 Both SNP 0026.scaffold00103 46275 1 G A scaffold901 ReadM SNP 0026.scaffold00103 46356 1 C T - ReadM SNP 0026.scaffold00103 46399 1 A G - Both SNP 0026.scaffold00103 46412 1 T C scaffold901 Both SNP 0026.scaffold00103 46489 1 A C scaffold901 Both INDEL 0026.scaffold00103 46572 1 T . scaffold901 Both SNP 0026.scaffold00103 46607 1 G A scaffold901 Both SNP 0026.scaffold00103 46658 1 A G scaffold901 ReadM SNP 0026.scaffold00103 46729 1 T C - ReadM SNP 0026.scaffold00103 46802 1 A T - ScafM SNP 0026.scaffold00103 46870 1 T C scaffold901 ReadM SNP 0026.scaffold00103 46956 1 T C - ReadM SNP 0026.scaffold00103 47720 1 A G - ReadM SNP 0026.scaffold00103 47734 1 G A - Both SNP 0026.scaffold00103 47790 1 A T scaffold901 Both SNP 0026.scaffold00103 47923 1 G C scaffold901 Both SNP 0026.scaffold00103 48019 1 G A scaffold901 ScafM SNP 0026.scaffold00103 48239 1 A G scaffold901 ScafM INDEL 0026.scaffold00103 48269 2 .. AA scaffold901 ScafM SNP 0026.scaffold00103 48292 1 A G scaffold901 ScafM SNP 0026.scaffold00103 48599 1 G A scaffold901 ScafM INDEL 0026.scaffold00103 48634 1 . T scaffold901 ScafM SNP 0026.scaffold00103 48636 1 C T scaffold901 ScafM SNP 0026.scaffold00103 48693 2 AG TC scaffold901 ScafM SNP 0026.scaffold00103 48908 1 T A scaffold901 ScafM INDEL 0026.scaffold00103 48987 1 . T scaffold901 ScafM INDEL 0026.scaffold00103 50179 1 . A scaffold901 ScafM INDEL 0026.scaffold00103 50286 2 AA .. scaffold901 Both SNP 0026.scaffold00103 50348 1 G A scaffold901 ScafM SNP 0026.scaffold00103 50374 1 A G scaffold901 ScafM SNP 0026.scaffold00103 50432 1 T C scaffold901 ScafM SNP 0026.scaffold00103 50463 1 G A scaffold901 ScafM SNP 0026.scaffold00103 50722 1 A T scaffold6196 Both SNP 0026.scaffold00103 50746 1 A G scaffold6196 ScafM INDEL 0026.scaffold00103 50818 2 TG .A scaffold6196 ScafM SNP 0026.scaffold00103 50845 1 G A scaffold6196 ScafM INDEL 0026.scaffold00103 50963 1 T . scaffold6196 Both SNP 0026.scaffold00103 50967 1 C G scaffold6196 ScafM SNP 0026.scaffold00103 50973 1 T A scaffold6196 ReadM SNP 0026.scaffold00103 51352 1 A G - Both SNP 0026.scaffold00103 51980 1 C T scaffold901 ReadM SNP 0026.scaffold00103 52055 1 T A - ReadM SNP 0026.scaffold00103 52062 1 C T - ReadM SNP 0026.scaffold00103 52341 1 T C - ReadM INDEL 0026.scaffold00103 52410 2 .. TC - ReadM SNP 0026.scaffold00103 52445 1 C A - ReadM SNP 0026.scaffold00103 52484 1 C T - ReadM SNP 0026.scaffold00103 52493 1 A C - ReadM SNP 0026.scaffold00103 52576 1 T C - ReadM SNP 0026.scaffold00103 52594 1 T C - ReadM SNP 0026.scaffold00103 52645 1 G A - ReadM SNP 0026.scaffold00103 52704 1 C T - ReadM SNP 0026.scaffold00103 52790 1 C A - ReadM SNP 0026.scaffold00103 52954 1 A T - ReadM SNP 0026.scaffold00103 52975 1 C A - ReadM SNP 0026.scaffold00103 53091 1 A T - ReadM SNP 0026.scaffold00103 53111 1 T C - ReadM SNP 0026.scaffold00103 53198 1 A G - ReadM SNP 0026.scaffold00103 53260 1 G C - ReadM SNP 0026.scaffold00103 53277 1 G C - ReadM SNP 0026.scaffold00103 53489 1 C T - ReadM SNP 0026.scaffold00103 53632 1 T A - ReadM SNP 0026.scaffold00103 53701 1 G T - ReadM SNP 0026.scaffold00103 53715 1 T C - ReadM SNP 0026.scaffold00103 53737 1 G A - ReadM SNP 0026.scaffold00103 53783 1 A G - ReadM SNP 0026.scaffold00103 53787 1 A G - ReadM SNP 0026.scaffold00103 53852 1 C T - Both SNP 0026.scaffold00103 53957 1 A G scaffold901 ScafM SNP 0026.scaffold00103 53974 1 T C scaffold901 ScafM SNP 0026.scaffold00103 53992 1 C T scaffold901 ScafM SNP 0026.scaffold00103 53995 1 T C scaffold901 Both SNP 0026.scaffold00103 54046 1 T G scaffold901 Both INDEL 0026.scaffold00103 54066 1 . T scaffold901 ReadM SNP 0026.scaffold00103 54240 1 G T - ReadM SNP 0026.scaffold00103 54281 1 G A - ScafM SNP 0026.scaffold00103 54602 1 C G scaffold901 ReadM SNP 0026.scaffold00103 54660 1 A G - ScafM SNP 0026.scaffold00103 54959 1 G T scaffold901 ScafM INDEL 0026.scaffold00103 54966 5 AAAAA ..... scaffold901 ScafM SNP 0026.scaffold00103 54980 1 A T scaffold901 Both SNP 0026.scaffold00103 55209 1 C T scaffold901 ScafM INDEL 0026.scaffold00103 55218 12 ............ AGAGAGAGAGAG scaffold901 Both SNP 0026.scaffold00103 55351 1 T G scaffold901 ReadM SNP 0026.scaffold00103 55356 1 T C - ReadM SNP 0026.scaffold00103 55429 1 A G - ReadM SNP 0026.scaffold00103 55581 1 A C - ReadM SNP 0026.scaffold00103 55714 1 A G - ReadM SNP 0026.scaffold00103 55723 1 C T - ReadM SNP 0026.scaffold00103 55739 1 T G - ReadM SNP 0026.scaffold00103 55807 1 G A - ReadM SNP 0026.scaffold00103 55819 1 G C - ReadM SNP 0026.scaffold00103 56147 1 G C - ReadM SNP 0026.scaffold00103 56152 1 G A - ReadM SNP 0026.scaffold00103 56163 1 A C - ReadM SNP 0026.scaffold00103 56231 1 C T - ReadM SNP 0026.scaffold00103 56249 1 T A - ReadM SNP 0026.scaffold00103 56344 1 C A - ReadM SNP 0026.scaffold00103 56398 1 G C - ReadM SNP 0026.scaffold00103 56456 1 G A - ReadM SNP 0026.scaffold00103 56505 1 A T - ReadM SNP 0026.scaffold00103 56568 1 G A - ReadM SNP 0026.scaffold00103 56577 1 G T - ReadM SNP 0026.scaffold00103 56661 1 C T - ReadM SNP 0026.scaffold00103 56682 1 T G - ReadM SNP 0026.scaffold00103 56708 1 A G - ReadM SNP 0026.scaffold00103 56780 1 T A - ReadM SNP 0026.scaffold00103 56885 1 C T - ReadM SNP 0026.scaffold00103 56910 1 T A - ReadM SNP 0026.scaffold00103 56943 1 C A - ReadM SNP 0026.scaffold00103 57198 1 T A - ReadM SNP 0026.scaffold00103 57301 1 T G - ReadM INDEL 0026.scaffold00103 57308 1 A . - ReadM SNP 0026.scaffold00103 57385 1 A G - ReadM SNP 0026.scaffold00103 57449 1 C T - ReadM SNP 0026.scaffold00103 57535 1 T C - ReadM SNP 0026.scaffold00103 57724 1 A T - ReadM SNP 0026.scaffold00103 57759 1 A G - ReadM SNP 0026.scaffold00103 57775 1 A G - Both SNP 0026.scaffold00103 57849 1 C A scaffold901 Both SNP 0026.scaffold00103 57937 1 A G scaffold901 Both SNP 0026.scaffold00103 57995 1 A G scaffold901 Both SNP 0026.scaffold00103 58002 1 C G scaffold901 ReadM SNP 0026.scaffold00103 58062 1 T C - ReadM SNP 0026.scaffold00103 58076 1 C T - ReadM SNP 0026.scaffold00103 58155 1 G C - ReadM SNP 0026.scaffold00103 58184 1 T G - ReadM SNP 0026.scaffold00103 58252 1 A T - ReadM SNP 0026.scaffold00103 58367 1 T C - ReadM SNP 0026.scaffold00103 58420 1 T C - ReadM SNP 0026.scaffold00103 58426 1 C T - ReadM SNP 0026.scaffold00103 58679 1 T C - ReadM SNP 0026.scaffold00103 58705 1 A T - ReadM SNP 0026.scaffold00103 58738 1 C T - ReadM SNP 0026.scaffold00103 58825 1 T C - ReadM SNP 0026.scaffold00103 58870 1 C G - ReadM SNP 0026.scaffold00103 58910 1 T C - ReadM SNP 0026.scaffold00103 59031 1 C T - ReadM SNP 0026.scaffold00103 59167 1 A G - ReadM SNP 0026.scaffold00103 59223 1 C G - ReadM SNP 0026.scaffold00103 59537 1 A C - ReadM SNP 0026.scaffold00103 59589 1 T C - ReadM SNP 0026.scaffold00103 59687 1 G A - ReadM SNP 0026.scaffold00103 59715 1 A G - ReadM SNP 0026.scaffold00103 59732 1 T C - ReadM SNP 0026.scaffold00103 59774 1 C T - ReadM SNP 0026.scaffold00103 59860 1 C G - ReadM SNP 0026.scaffold00103 59937 1 C T - ReadM SNP 0026.scaffold00103 60049 1 T C - ReadM SNP 0026.scaffold00103 60249 1 C A - ReadM SNP 0026.scaffold00103 60614 1 C T - Both SNP 0026.scaffold00103 60708 1 G A scaffold901 ScafM SNP 0026.scaffold00103 60936 1 A C scaffold901 ScafM INDEL 0026.scaffold00103 60948 2 CG .A scaffold901 ReadM SNP 0026.scaffold00103 60990 1 G A - ReadM SNP 0026.scaffold00103 61002 1 C A - ReadM SNP 0026.scaffold00103 61049 1 C G - ReadM SNP 0026.scaffold00103 61120 1 C T - ReadM SNP 0026.scaffold00103 61174 1 C G - ReadM SNP 0026.scaffold00103 61277 1 A C - ReadM SNP 0026.scaffold00103 61344 1 G C - ReadM SNP 0026.scaffold00103 61496 1 T C - ReadM SNP 0026.scaffold00103 61542 1 C T - ReadM SNP 0026.scaffold00103 61552 1 A G - ReadM SNP 0026.scaffold00103 61641 1 T C - ReadM SNP 0026.scaffold00103 61662 1 G A - ReadM SNP 0026.scaffold00103 61678 1 C T - ReadM SNP 0026.scaffold00103 61719 1 C G - ReadM SNP 0026.scaffold00103 61726 1 C A - ReadM SNP 0026.scaffold00103 61822 1 A G - ReadM SNP 0026.scaffold00103 61835 1 C T - ReadM SNP 0026.scaffold00103 61953 1 G A - Both SNP 0026.scaffold00103 62100 1 T C scaffold901 ReadM SNP 0026.scaffold00103 62269 1 A G - ReadM SNP 0026.scaffold00103 62437 1 T A - ReadM SNP 0026.scaffold00103 62725 1 A G - ReadM SNP 0026.scaffold00103 62798 1 A G - ReadM SNP 0026.scaffold00103 62800 1 A C - ReadM SNP 0026.scaffold00103 62828 1 T C - ReadM SNP 0026.scaffold00103 62876 1 A G - ReadM SNP 0026.scaffold00103 62901 1 A G - ReadM SNP 0026.scaffold00103 63030 1 G A - ReadM SNP 0026.scaffold00103 63136 1 A G - ReadM SNP 0026.scaffold00103 63149 1 G A - ReadM SNP 0026.scaffold00103 63198 1 T G - ReadM SNP 0026.scaffold00103 63402 1 T C - ReadM SNP 0026.scaffold00103 63426 1 G A - ReadM SNP 0026.scaffold00103 63556 1 G C - ReadM SNP 0026.scaffold00103 63677 1 C T - ReadM SNP 0026.scaffold00103 63709 1 G T - ReadM SNP 0026.scaffold00103 63724 1 C T - ReadM INDEL 0026.scaffold00103 63841 1 . G - ReadM SNP 0026.scaffold00103 64125 1 T C - ReadM SNP 0026.scaffold00103 64137 1 A G - ReadM SNP 0026.scaffold00103 64140 1 A T - ReadM SNP 0026.scaffold00103 64236 1 A G - ReadM SNP 0026.scaffold00103 64311 1 C T - ReadM SNP 0026.scaffold00103 64374 1 A G - ReadM SNP 0026.scaffold00103 64441 1 C A - Both SNP 0026.scaffold00103 64493 1 A T scaffold901 Both SNP 0026.scaffold00103 64496 1 A T scaffold901 Both INDEL 0026.scaffold00103 64623 1 A . scaffold901 ScafM INDEL 0026.scaffold00103 64682 2 AA .. scaffold901 ScafM SNP 0026.scaffold00103 64704 1 G A scaffold901 ScafM INDEL 0026.scaffold00103 64706 1 A . scaffold901 Both SNP 0026.scaffold00103 64752 1 A G scaffold901 Both SNP 0026.scaffold00103 64819 1 T A scaffold901 ScafM SNP 0026.scaffold00103 65012 1 G A scaffold901 ScafM INDEL 0026.scaffold00103 65015 1 C . scaffold901 ScafM SNP 0026.scaffold00103 65029 1 T C scaffold901 ScafM SNP 0026.scaffold00103 65040 1 A C scaffold901 ScafM INDEL 0026.scaffold00103 65308 8 ........ GGGTTTGA scaffold901 Both SNP 0026.scaffold00103 65330 1 C T scaffold901 ReadM SNP 0026.scaffold00103 65375 1 A C - ReadM SNP 0026.scaffold00103 65423 1 A G - ReadM SNP 0026.scaffold00103 65434 1 G A - ReadM SNP 0026.scaffold00103 65503 1 G T - ReadM SNP 0026.scaffold00103 65519 1 C T - ReadM SNP 0026.scaffold00103 65579 1 A G - ReadM SNP 0026.scaffold00103 65900 1 C G - Both SNP 0026.scaffold00103 66077 1 C T scaffold901 Both SNP 0026.scaffold00103 66120 1 T C scaffold901 Both SNP 0026.scaffold00103 66361 1 C A scaffold901 ScafM SNP 0026.scaffold00103 66447 1 T C scaffold901 ScafM SNP 0026.scaffold00103 66597 1 C T scaffold901 ScafM SNP 0026.scaffold00103 67285 1 C T scaffold901 ScafM SNP 0026.scaffold00103 67296 1 A G scaffold901 ScafM SNP 0026.scaffold00103 67348 1 A C scaffold901 ReadM SNP 0026.scaffold00103 67752 1 G T - ReadM SNP 0026.scaffold00103 67826 1 G T - ReadM SNP 0026.scaffold00103 67840 1 A T - ReadM SNP 0026.scaffold00103 67873 1 A T - ReadM SNP 0026.scaffold00103 67891 1 C G - ReadM SNP 0026.scaffold00103 68081 1 T C - ReadM SNP 0026.scaffold00103 68120 1 T C - ReadM SNP 0026.scaffold00103 68145 1 A G - ReadM SNP 0026.scaffold00103 68205 1 T G - ReadM SNP 0026.scaffold00103 68551 1 C G - ReadM SNP 0026.scaffold00103 68699 1 A T - Both SNP 0026.scaffold00103 68871 1 C T scaffold901 ReadM SNP 0026.scaffold00103 69257 1 G C - ReadM SNP 0026.scaffold00103 69284 1 T G - ReadM SNP 0026.scaffold00103 69596 1 T C - ReadM SNP 0026.scaffold00103 69682 1 C G - ReadM SNP 0026.scaffold00103 69690 1 G T - ReadM SNP 0026.scaffold00103 69709 1 G A - ReadM SNP 0026.scaffold00103 69759 1 A T - ReadM SNP 0026.scaffold00103 69761 1 C T - ReadM INDEL 0026.scaffold00103 69843 1 . C - ReadM SNP 0026.scaffold00103 69878 1 C G - ReadM SNP 0026.scaffold00103 69914 1 A C - ReadM SNP 0026.scaffold00103 69926 1 T C - ReadM SNP 0026.scaffold00103 69965 1 A G - ReadM SNP 0026.scaffold00103 70051 1 G A - ReadM SNP 0026.scaffold00103 70137 1 G T - ReadM SNP 0026.scaffold00103 70161 1 G A - ReadM SNP 0026.scaffold00103 70362 1 G A - ReadM SNP 0026.scaffold00103 70374 1 A G - ReadM SNP 0026.scaffold00103 70443 1 A T - Both SNP 0026.scaffold00103 70567 1 T A scaffold901 Both SNP 0026.scaffold00103 70656 1 A G scaffold901 Both SNP 0026.scaffold00103 70673 1 C T scaffold901 ReadM SNP 0026.scaffold00103 70726 1 G A - ReadM SNP 0026.scaffold00103 70842 1 A G - ReadM SNP 0026.scaffold00103 70944 1 T A - Both SNP 0026.scaffold00103 71023 1 A G scaffold901 Both SNP 0026.scaffold00103 71047 1 A C scaffold901 ScafM SNP 0026.scaffold00103 71138 2 AC CT scaffold901 Both SNP 0026.scaffold00103 71215 1 A G scaffold901 ScafM INDEL 0026.scaffold00103 71349 32 ................................ TTCAGCCCTCTTACTCACGTCGCCTAATTTGA scaffold901 ReadM SNP 0026.scaffold00103 71440 1 A G - ScafM SNP 0026.scaffold00103 71959 1 C G scaffold901 ScafM SNP 0026.scaffold00103 72082 1 T A scaffold901 ScafM SNP 0026.scaffold00103 72198 1 T A scaffold901 Both SNP 0026.scaffold00103 72397 1 A G scaffold901 Both SNP 0026.scaffold00103 72479 1 C A scaffold901 Both SNP 0026.scaffold00103 72576 1 C A scaffold901 ReadM SNP 0026.scaffold00103 72671 1 A T - ReadM SNP 0026.scaffold00103 72716 1 A G - ReadM SNP 0026.scaffold00103 72720 1 G A - ReadM SNP 0026.scaffold00103 72833 1 G C - ReadM SNP 0026.scaffold00103 72898 1 A G - ReadM SNP 0026.scaffold00103 72962 1 T A - ReadM SNP 0026.scaffold00103 72979 1 G A - ReadM SNP 0026.scaffold00103 73110 1 T G - ReadM SNP 0026.scaffold00103 73132 1 C T - ReadM SNP 0026.scaffold00103 73141 1 A G - ReadM SNP 0026.scaffold00103 73665 1 G A - ReadM SNP 0026.scaffold00103 73783 1 G A - ReadM SNP 0026.scaffold00103 73811 1 A T - ReadM SNP 0026.scaffold00103 73849 1 G A - ReadM SNP 0026.scaffold00103 73886 1 G A - ReadM SNP 0026.scaffold00103 73942 1 A G - ReadM SNP 0026.scaffold00103 73959 1 G A - ReadM SNP 0026.scaffold00103 74035 1 C T - ReadM SNP 0026.scaffold00103 74260 1 A G - ReadM SNP 0026.scaffold00103 74375 1 G A - ReadM SNP 0026.scaffold00103 74382 1 T G - ReadM SNP 0026.scaffold00103 74555 1 T C - ReadM SNP 0026.scaffold00103 74654 1 G C - ReadM SNP 0026.scaffold00103 74733 1 T C - ReadM SNP 0026.scaffold00103 74738 1 G A - ReadM SNP 0026.scaffold00103 74831 1 A G - ReadM SNP 0026.scaffold00103 74909 1 C T - ReadM SNP 0026.scaffold00103 74911 1 A G - ReadM SNP 0026.scaffold00103 74914 1 T C - ReadM SNP 0026.scaffold00103 75278 1 G A - ReadM SNP 0026.scaffold00103 75330 1 A G - ReadM SNP 0026.scaffold00103 75353 1 A C - ReadM SNP 0026.scaffold00103 75436 1 C G - ReadM SNP 0026.scaffold00103 75510 1 T A - ReadM INDEL 0026.scaffold00103 75511 1 . A - ReadM SNP 0026.scaffold00103 75679 1 G A - ReadM SNP 0026.scaffold00103 75704 1 A G - ReadM SNP 0026.scaffold00103 75793 1 C T - ReadM SNP 0026.scaffold00103 76209 1 T G - ReadM SNP 0026.scaffold00103 76216 1 T A - ReadM SNP 0026.scaffold00103 76223 1 G T - ReadM SNP 0026.scaffold00103 76651 1 C T - ReadM SNP 0026.scaffold00103 76714 1 C G - ReadM SNP 0026.scaffold00103 76903 1 A G - ReadM SNP 0026.scaffold00103 76963 2 GC AA - Both SNP 0026.scaffold00103 77064 1 A T scaffold901 Both INDEL 0026.scaffold00103 77085 2 .. AC scaffold901 ReadM INDEL 0026.scaffold00103 77086 2 .. CG - Both SNP 0026.scaffold00103 77248 1 T G scaffold901 ScafM SNP 0026.scaffold00103 77256 1 T G scaffold901 ReadM SNP 0026.scaffold00103 77369 1 T C - ReadM SNP 0026.scaffold00103 77501 1 A G - ReadM SNP 0026.scaffold00103 77508 1 G A - Both SNP 0026.scaffold00103 77614 1 A G scaffold901 Both SNP 0026.scaffold00103 77709 1 G T scaffold901 ReadM SNP 0026.scaffold00103 77749 1 A G - ReadM SNP 0026.scaffold00103 77752 1 T C - ReadM SNP 0026.scaffold00103 77847 1 T C - Both SNP 0026.scaffold00103 78109 1 T G scaffold901 ReadM SNP 0026.scaffold00103 78280 1 A G - ReadM SNP 0026.scaffold00103 78551 1 T A - ReadM SNP 0026.scaffold00103 79104 1 C T - ReadM INDEL 0026.scaffold00103 79408 1 . C - ReadM SNP 0026.scaffold00103 79458 1 T G - ReadM SNP 0026.scaffold00103 79657 1 T C - Both SNP 0026.scaffold00103 79780 1 C T scaffold901 Both SNP 0026.scaffold00103 79884 1 C T scaffold901 ReadM SNP 0026.scaffold00103 80059 1 A G - ReadM SNP 0026.scaffold00103 80113 1 G A - ReadM SNP 0026.scaffold00103 80209 1 C T - ReadM SNP 0026.scaffold00103 80215 1 A G - ReadM SNP 0026.scaffold00103 80305 1 G T - ReadM SNP 0026.scaffold00103 80348 1 G A - ReadM SNP 0026.scaffold00103 80382 1 G T - ReadM SNP 0026.scaffold00103 80599 1 A T - ReadM SNP 0026.scaffold00103 80860 1 C A - ReadM SNP 0026.scaffold00103 80958 1 C G - ReadM SNP 0026.scaffold00103 81147 1 G A - ReadM SNP 0026.scaffold00103 81164 1 A G - ReadM SNP 0026.scaffold00103 81189 1 T C - ReadM SNP 0026.scaffold00103 81428 1 A G - ReadM SNP 0026.scaffold00103 81577 1 A G - ReadM SNP 0026.scaffold00103 81640 1 G A - ReadM SNP 0026.scaffold00103 81656 1 C A - ReadM SNP 0026.scaffold00103 81707 1 C A - ReadM SNP 0026.scaffold00103 81710 1 G T - ReadM SNP 0026.scaffold00103 81801 1 G C - ReadM INDEL 0026.scaffold00103 81845 1 G . - ReadM SNP 0026.scaffold00103 82013 1 A C - ReadM SNP 0026.scaffold00103 82056 1 A G - ReadM SNP 0026.scaffold00103 82104 1 G A - ReadM SNP 0026.scaffold00103 82326 1 T C - ReadM SNP 0026.scaffold00103 82401 1 A C - ReadM SNP 0026.scaffold00103 82543 1 C T - ReadM SNP 0026.scaffold00103 82664 1 A G - ReadM SNP 0026.scaffold00103 82755 1 G A - ReadM SNP 0026.scaffold00103 82874 1 T G - ReadM INDEL 0026.scaffold00103 82926 2 TA .. - ReadM SNP 0026.scaffold00103 83414 1 T G - Both SNP 0026.scaffold00103 83733 1 C T scaffold901 Both SNP 0026.scaffold00103 83765 1 T A scaffold901 Both SNP 0026.scaffold00103 83791 1 C G scaffold901 Both SNP 0026.scaffold00103 83804 1 T C scaffold901 Both SNP 0026.scaffold00103 84132 1 C T scaffold901 Both SNP 0026.scaffold00103 84176 1 T G scaffold901 Both SNP 0026.scaffold00103 84323 1 C T scaffold901 Both SNP 0026.scaffold00103 84564 1 T G scaffold901 Both SNP 0026.scaffold00103 84657 1 T A scaffold901 ReadM SNP 0026.scaffold00103 84823 1 A T - ReadM SNP 0026.scaffold00103 84964 1 C T - ScafM INDEL 0026.scaffold00103 85026 3 .TT GCC scaffold901 Both SNP 0026.scaffold00103 85071 1 T C scaffold901 ReadM INDEL 0026.scaffold00103 85146 2 .. AA - ReadM INDEL 0026.scaffold00103 85155 2 .. AC - ReadM SNP 0026.scaffold00103 86771 1 G A - ScafM SNP 0026.scaffold00103 86789 1 G A scaffold27440 ReadM SNP 0026.scaffold00103 86791 1 A T - ScafM SNP 0026.scaffold00103 86825 1 G A scaffold27440 ReadM SNP 0026.scaffold00103 86833 1 G A - ScafM SNP 0026.scaffold00103 86834 1 A G scaffold27440 Both SNP 0026.scaffold00103 86843 1 G C scaffold27440 ScafM SNP 0026.scaffold00103 86849 1 G A scaffold27440 ScafM INDEL 0026.scaffold00103 86888 6 ...... CGTTTC scaffold27440 ScafM SNP 0026.scaffold00103 86890 1 A C scaffold27440 ScafM SNP 0026.scaffold00103 87021 1 G A scaffold27440 ScafM SNP 0026.scaffold00103 87206 1 C T scaffold27440 ScafM INDEL 0026.scaffold00103 87212 1 . A scaffold27440 ScafM SNP 0026.scaffold00103 87342 1 G T scaffold27440 ScafM SNP 0026.scaffold00103 87346 1 T G scaffold27440 ScafM SNP 0026.scaffold00103 87492 1 A C scaffold27440 ScafM SNP 0026.scaffold00103 87495 1 C G scaffold27440 ScafM SNP 0026.scaffold00103 87533 1 T A scaffold27440 ScafM SNP 0026.scaffold00103 87555 1 G C scaffold27440 ScafM SNP 0026.scaffold00103 87680 1 A G scaffold27440 ScafM SNP 0026.scaffold00103 87692 1 A C scaffold27440 ScafM SNP 0026.scaffold00103 87716 1 A G scaffold27440 ScafM SNP 0026.scaffold00103 87762 1 T G scaffold27440 ScafM SNP 0026.scaffold00103 87780 1 C T scaffold27440 ReadM SNP 0026.scaffold00103 87795 1 C A - ReadM SNP 0026.scaffold00103 87852 1 A G - ScafM SNP 0026.scaffold00103 87860 1 C T scaffold27440 ScafM SNP 0026.scaffold00103 87894 1 G C scaffold27440 ScafM SNP 0026.scaffold00103 87932 2 TT CA scaffold27440 ScafM SNP 0026.scaffold00103 87946 1 G A scaffold27440 Both SNP 0026.scaffold00103 87997 1 C T scaffold27440 Both SNP 0026.scaffold00103 88014 1 G A scaffold27440 ScafM SNP 0026.scaffold00103 88018 1 T C scaffold27440 ScafM SNP 0026.scaffold00103 88054 1 C A scaffold27440 ScafM SNP 0026.scaffold00103 88065 1 T C scaffold27440 ScafM SNP 0026.scaffold00103 88079 1 G A scaffold27440 ScafM SNP 0026.scaffold00103 88114 1 T A scaffold27440 ScafM SNP 0026.scaffold00103 88119 1 C G scaffold27440 ScafM INDEL 0026.scaffold00103 88152 1 A . scaffold27440 ScafM SNP 0026.scaffold00103 88169 1 G T scaffold27440 ScafM SNP 0026.scaffold00103 88188 1 A T scaffold27440 ScafM INDEL 0026.scaffold00103 88199 2 TG .C scaffold27440 ScafM INDEL 0026.scaffold00103 88208 8 CCCAAAAT ........ scaffold27440 ScafM SNP 0026.scaffold00103 88228 1 C T scaffold27440 ReadM SNP 0026.scaffold00103 88230 1 G A - ScafM INDEL 0026.scaffold00103 88246 2 AA .G scaffold27440 Both SNP 0026.scaffold00103 88278 1 T G scaffold27440 ScafM SNP 0026.scaffold00103 88311 1 G A scaffold27440 ScafM SNP 0026.scaffold00103 88322 1 G T scaffold27440 ScafM SNP 0026.scaffold00103 88375 1 A G scaffold27440 ScafM SNP 0026.scaffold00103 88427 1 C T scaffold27440 ScafM INDEL 0026.scaffold00103 88437 23 ....................... AAGAGAGGAAGGTCGGTGGTGAC scaffold27440 ScafM SNP 0026.scaffold00103 88565 1 A C scaffold27440 ReadM SNP 0026.scaffold00103 92645 1 G T - ReadM SNP 0026.scaffold00103 92651 1 G T - ReadM SNP 0026.scaffold00103 92659 1 C T - ReadM INDEL 0026.scaffold00103 92928 1 . C - ReadM SNP 0026.scaffold00103 93027 1 C A - ReadM SNP 0026.scaffold00103 93047 1 C T - ReadM SNP 0026.scaffold00103 93102 1 G A - ReadM SNP 0026.scaffold00103 93124 1 C A - ReadM SNP 0026.scaffold00103 93255 1 T C - ReadM SNP 0026.scaffold00103 93261 1 C T - Both SNP 0026.scaffold00103 93815 1 A C scaffold6563 Both SNP 0026.scaffold00103 93837 1 G A scaffold6563 Both SNP 0026.scaffold00103 93922 1 G A scaffold6563 Both SNP 0026.scaffold00103 93986 1 A G scaffold6563 ReadM SNP 0026.scaffold00103 94083 1 A T - ReadM SNP 0026.scaffold00103 94151 1 A G - ReadM SNP 0026.scaffold00103 94167 1 A G - ReadM SNP 0026.scaffold00103 94326 1 A T - ReadM SNP 0026.scaffold00103 94445 1 C G - ReadM INDEL 0026.scaffold00103 94478 1 C . - ReadM SNP 0026.scaffold00103 94633 1 C T - ReadM SNP 0026.scaffold00103 94663 1 T A - ReadM SNP 0026.scaffold00103 96803 1 C A - ReadM SNP 0026.scaffold00103 96825 1 A C - ReadM SNP 0026.scaffold00103 96901 1 C A - ReadM SNP 0026.scaffold00103 96976 1 A C - ReadM SNP 0026.scaffold00103 97079 1 G A - ReadM SNP 0026.scaffold00103 97168 1 G A - ReadM SNP 0026.scaffold00103 97180 1 G T - ReadM SNP 0026.scaffold00103 97223 1 G C - ReadM SNP 0026.scaffold00103 97251 1 T C - ReadM SNP 0026.scaffold00103 97263 1 C T - ReadM SNP 0026.scaffold00103 97413 1 G T - Both SNP 0026.scaffold00103 97494 1 G T scaffold6563 Both SNP 0026.scaffold00103 97523 1 C A scaffold6563 Both SNP 0026.scaffold00103 97653 1 C T scaffold6563 Both SNP 0026.scaffold00103 97656 1 A G scaffold6563 Both SNP 0026.scaffold00103 97681 1 G C scaffold6563 ScafM SNP 0026.scaffold00103 97737 1 T C scaffold6563 ScafM SNP 0026.scaffold00103 97740 1 T C scaffold6563 ScafM SNP 0026.scaffold00103 97767 1 C G scaffold6563 ScafM SNP 0026.scaffold00103 97771 1 C A scaffold6563 ScafM SNP 0026.scaffold00103 97773 1 C A scaffold6563 ReadM SNP 0026.scaffold00103 97931 1 T C - ReadM SNP 0026.scaffold00103 97997 1 T C - ReadM SNP 0026.scaffold00103 98014 1 G A - ReadM SNP 0026.scaffold00103 98150 1 G T - ReadM SNP 0026.scaffold00103 98225 1 C A - ReadM SNP 0026.scaffold00103 98285 1 T C - ReadM SNP 0026.scaffold00103 98294 1 G C - ReadM SNP 0026.scaffold00103 98461 1 T C - ReadM SNP 0026.scaffold00103 98505 1 A G - ReadM SNP 0026.scaffold00103 98550 1 T C - ReadM SNP 0026.scaffold00103 98690 1 C A - ReadM SNP 0026.scaffold00103 98817 1 C G - ReadM SNP 0026.scaffold00103 98852 1 G A - ReadM SNP 0026.scaffold00103 98990 1 C T - ReadM SNP 0026.scaffold00103 99099 1 T C - ReadM SNP 0026.scaffold00103 99102 1 T A - ReadM SNP 0026.scaffold00103 99192 1 T C - ReadM SNP 0026.scaffold00103 99251 1 G A - ReadM SNP 0026.scaffold00103 99269 1 T C - ReadM SNP 0026.scaffold00103 99657 1 A G - ReadM SNP 0026.scaffold00103 100025 1 C T - ReadM SNP 0026.scaffold00103 100324 1 G A - ReadM INDEL 0026.scaffold00103 100328 1 . C - ReadM SNP 0026.scaffold00103 100375 1 G T - ReadM SNP 0026.scaffold00103 100586 1 G A - ReadM SNP 0026.scaffold00103 100687 1 A G - Both SNP 0026.scaffold00103 100762 1 C G scaffold6563 ReadM SNP 0026.scaffold00103 100819 1 T C - ReadM SNP 0026.scaffold00103 100912 1 G A - ReadM SNP 0026.scaffold00103 100955 1 G T - Both SNP 0026.scaffold00103 101004 1 G A scaffold6563 ReadM INDEL 0026.scaffold00103 101473 1 A . - ReadM SNP 0026.scaffold00103 101587 1 A C - ReadM INDEL 0026.scaffold00103 101605 1 G . - ReadM SNP 0026.scaffold00103 101706 1 T C - ReadM SNP 0026.scaffold00103 102039 1 T C - ReadM SNP 0026.scaffold00103 102129 1 A C - ReadM SNP 0026.scaffold00103 102411 1 T A - ReadM SNP 0026.scaffold00103 102418 1 T C - ReadM SNP 0026.scaffold00103 102463 1 A G - ReadM SNP 0026.scaffold00103 102507 1 C T - ReadM SNP 0026.scaffold00103 102560 1 C G - ReadM SNP 0026.scaffold00103 102677 1 G A - ReadM SNP 0026.scaffold00103 102858 1 G T - ReadM SNP 0026.scaffold00103 102928 1 T C - ReadM SNP 0026.scaffold00103 102940 1 T C - ReadM SNP 0026.scaffold00103 102950 1 T G - ReadM SNP 0026.scaffold00103 103118 1 T C - ReadM SNP 0026.scaffold00103 103158 1 C T - ReadM SNP 0026.scaffold00103 103239 1 T C - ReadM SNP 0026.scaffold00103 103274 1 A G - ReadM SNP 0026.scaffold00103 103321 1 A G - ReadM SNP 0026.scaffold00103 103387 1 G A - ReadM SNP 0026.scaffold00103 103697 1 A G - ReadM SNP 0026.scaffold00103 103754 1 G T - ReadM SNP 0026.scaffold00103 103804 1 T C - ReadM SNP 0026.scaffold00103 103901 1 C G - ReadM SNP 0026.scaffold00103 103927 1 A C - ReadM SNP 0026.scaffold00103 103951 1 T C - ReadM SNP 0026.scaffold00103 104292 1 C G - ReadM SNP 0026.scaffold00103 104392 1 C T - ReadM SNP 0026.scaffold00103 104434 1 A G - ReadM SNP 0026.scaffold00103 104454 1 A T - ReadM SNP 0026.scaffold00103 104637 1 G T - ReadM SNP 0026.scaffold00103 104648 1 T C - ReadM SNP 0026.scaffold00103 104766 1 T C - ReadM SNP 0026.scaffold00103 104982 1 T C - ReadM INDEL 0026.scaffold00103 105093 3 ... AAA - ReadM SNP 0026.scaffold00103 105219 1 G T - ReadM SNP 0026.scaffold00103 105273 1 A G - ReadM SNP 0026.scaffold00103 105285 1 A G - ReadM SNP 0026.scaffold00103 105347 1 C T - ReadM SNP 0026.scaffold00103 105372 1 G A - Both SNP 0026.scaffold00103 105884 1 G A scaffold6563 Both SNP 0026.scaffold00103 105900 1 G T scaffold6563 Both SNP 0026.scaffold00103 106067 1 G A scaffold6563 Both SNP 0026.scaffold00103 106178 1 T A scaffold6563 Both SNP 0026.scaffold00103 106190 1 T G scaffold6563 ReadM SNP 0026.scaffold00103 106272 1 C T - ReadM SNP 0026.scaffold00103 106318 1 T C - ReadM SNP 0026.scaffold00103 107534 1 C A - ReadM SNP 0026.scaffold00103 107805 1 C A - ReadM SNP 0026.scaffold00103 108170 1 G A - ReadM SNP 0026.scaffold00103 108214 1 A T - ReadM SNP 0026.scaffold00103 108335 1 T A - ReadM SNP 0026.scaffold00103 108505 1 A C - ReadM SNP 0026.scaffold00103 108508 1 T A - ReadM SNP 0026.scaffold00103 108603 1 T C - ReadM SNP 0026.scaffold00103 108963 1 T C - ReadM SNP 0026.scaffold00103 109005 1 G C - ReadM SNP 0026.scaffold00103 109134 1 C T - ReadM SNP 0026.scaffold00103 109512 1 T C - ReadM INDEL 0026.scaffold00103 109546 2 AG .. - ScafM INDEL 0026.scaffold00103 110014 1 T . scaffold6563 Both SNP 0026.scaffold00103 110187 1 T G scaffold6563 Both SNP 0026.scaffold00103 110708 1 A G scaffold6563 ScafM SNP 0026.scaffold00103 110783 1 T A scaffold6563 ScafM SNP 0026.scaffold00103 110994 1 C T scaffold6563 ScafM SNP 0026.scaffold00103 111033 1 T A scaffold6563 Both SNP 0026.scaffold00103 111373 1 A G scaffold6563 ScafM SNP 0026.scaffold00103 111474 1 G T scaffold6563 ScafM SNP 0026.scaffold00103 111482 1 G A scaffold6563 ScafM SNP 0026.scaffold00103 111501 1 C G scaffold6563 ScafM INDEL 0026.scaffold00103 111503 1 T . scaffold6563 ScafM INDEL 0026.scaffold00103 111570 1 A . scaffold6563 ScafM SNP 0026.scaffold00103 111585 1 T A scaffold6563 ReadM SNP 0026.scaffold00103 111736 1 T G - ReadM SNP 0026.scaffold00103 112649 1 G C - Both SNP 0026.scaffold00103 112923 1 C G scaffold6563 ReadM SNP 0026.scaffold00103 113220 1 C T - ReadM SNP 0026.scaffold00103 113391 1 C T - ReadM SNP 0026.scaffold00103 113579 1 G A - ReadM SNP 0026.scaffold00103 113695 1 C A - ReadM SNP 0026.scaffold00103 113732 1 G T - ReadM SNP 0026.scaffold00103 113879 1 G A - ReadM SNP 0026.scaffold00103 113891 1 A C - ReadM SNP 0026.scaffold00103 114080 1 G A - ReadM SNP 0026.scaffold00103 114118 1 G A - Both SNP 0026.scaffold00103 114298 1 C T scaffold6563 Both SNP 0026.scaffold00103 114317 1 A C scaffold6563 Both SNP 0026.scaffold00103 114344 1 G A scaffold6563 ReadM INDEL 0026.scaffold00103 114491 1 G . - ReadM SNP 0026.scaffold00103 114555 1 G T - ReadM SNP 0026.scaffold00103 114593 1 A G - ReadM SNP 0026.scaffold00103 114703 1 C T - ReadM SNP 0026.scaffold00103 114791 1 A G - ReadM SNP 0026.scaffold00103 115029 1 T C - ReadM SNP 0026.scaffold00103 115042 1 C T - ReadM SNP 0026.scaffold00103 115045 1 C T - Both SNP 0026.scaffold00103 115274 1 C G scaffold6563 Both SNP 0026.scaffold00103 115279 1 A T scaffold6563 Both SNP 0026.scaffold00103 115500 1 A G scaffold6563 Both SNP 0026.scaffold00103 115902 1 T A scaffold6563 ScafM INDEL 0026.scaffold00103 115936 1 T . scaffold6563 Both SNP 0026.scaffold00103 116005 1 G T scaffold6563 Both SNP 0026.scaffold00103 116403 1 C T scaffold6563 Both SNP 0026.scaffold00103 116448 1 C A scaffold6563 Both SNP 0026.scaffold00103 116529 1 A T scaffold6563 Both SNP 0026.scaffold00103 116677 1 T C scaffold6563 Both SNP 0026.scaffold00103 116697 1 A G scaffold6563 Both SNP 0026.scaffold00103 116978 1 T C scaffold6563 Both SNP 0026.scaffold00103 117040 1 G A scaffold6563 Both SNP 0026.scaffold00103 117184 1 A T scaffold6563 Both SNP 0026.scaffold00103 117191 1 A T scaffold6563 Both SNP 0026.scaffold00103 117425 1 C T scaffold6563 Both SNP 0026.scaffold00103 117722 1 C A scaffold6563 Both SNP 0026.scaffold00103 117828 1 A C scaffold6563 Both SNP 0026.scaffold00103 117888 1 T C scaffold6563 Both SNP 0026.scaffold00103 117963 1 G T scaffold6563 Both SNP 0026.scaffold00103 118068 1 T C scaffold6563 Both SNP 0026.scaffold00103 118103 1 T C scaffold6563 ScafM SNP 0026.scaffold00103 118214 1 A G scaffold6563 ScafM SNP 0026.scaffold00103 118247 1 C T scaffold6563 ScafM SNP 0026.scaffold00103 118258 1 G C scaffold6563 ReadM SNP 0026.scaffold00103 121014 1 G C - ReadM SNP 0026.scaffold00103 121018 1 G A - ReadM SNP 0026.scaffold00103 121061 1 A G - ReadM SNP 0026.scaffold00103 121116 1 A T - ReadM SNP 0026.scaffold00103 121278 1 C A - ReadM SNP 0026.scaffold00103 121303 1 C T - ReadM SNP 0026.scaffold00103 121510 1 A G - ReadM SNP 0026.scaffold00103 121615 1 A G - ReadM SNP 0026.scaffold00103 121640 1 A G - ReadM SNP 0026.scaffold00103 121652 1 C T - ReadM SNP 0026.scaffold00103 121954 1 A G - ReadM SNP 0026.scaffold00103 122339 1 T C - ReadM SNP 0026.scaffold00103 122626 1 A G - ReadM SNP 0026.scaffold00103 122732 1 C T - ReadM SNP 0026.scaffold00103 122821 1 G A - ReadM SNP 0026.scaffold00103 122829 1 G A - ReadM SNP 0026.scaffold00103 122895 1 T C - ReadM SNP 0026.scaffold00103 122899 1 T C - ReadM SNP 0026.scaffold00103 123029 1 G A - ReadM SNP 0026.scaffold00103 126546 1 A T - ReadM SNP 0026.scaffold00103 126658 1 T C - ReadM SNP 0026.scaffold00103 126665 1 C G - ReadM SNP 0026.scaffold00103 126684 1 C G - ReadM SNP 0026.scaffold00103 126851 1 T C - ReadM SNP 0026.scaffold00103 127251 1 C G - ReadM SNP 0026.scaffold00103 127550 1 T A - ReadM SNP 0026.scaffold00103 127648 1 G T - ReadM SNP 0026.scaffold00103 127653 1 A G - ReadM SNP 0026.scaffold00103 127699 1 A G - ReadM SNP 0026.scaffold00103 127739 1 T C - ReadM SNP 0026.scaffold00103 127806 1 A G - ReadM INDEL 0026.scaffold00103 127953 1 . A - ReadM SNP 0026.scaffold00103 127997 1 C T - ReadM INDEL 0026.scaffold00103 128007 1 A . - ReadM SNP 0026.scaffold00103 128157 1 A G - ReadM SNP 0026.scaffold00103 128174 1 C T - ReadM SNP 0026.scaffold00103 128451 1 T C - ReadM SNP 0026.scaffold00103 128514 1 A C - ReadM SNP 0026.scaffold00103 128595 1 T C - ReadM SNP 0026.scaffold00103 128818 1 C T - ReadM SNP 0026.scaffold00103 128845 1 A G - ReadM SNP 0026.scaffold00103 129041 1 C T - ReadM SNP 0026.scaffold00103 129122 1 G C - ReadM SNP 0026.scaffold00103 129160 1 G A - ReadM SNP 0026.scaffold00103 129175 1 T A - ReadM SNP 0026.scaffold00103 129194 1 G T - ReadM SNP 0026.scaffold00103 129341 1 G C - ReadM SNP 0026.scaffold00103 129396 1 A G - ReadM SNP 0026.scaffold00103 129431 1 C T - ReadM SNP 0026.scaffold00103 129448 1 A G - ReadM SNP 0026.scaffold00103 129460 1 C T - ReadM SNP 0026.scaffold00103 129584 1 C T - ReadM SNP 0026.scaffold00103 129662 1 A C - ReadM SNP 0026.scaffold00103 129805 1 G A - ReadM SNP 0026.scaffold00103 129938 1 G A - ReadM SNP 0026.scaffold00103 129945 1 C T - ReadM SNP 0026.scaffold00103 130022 1 A G - ReadM SNP 0026.scaffold00103 130059 1 G A - ScafM INDEL 0026.scaffold00103 130405 1 . C scaffold2590 ScafM INDEL 0026.scaffold00103 130415 1 A . scaffold2590 ScafM SNP 0026.scaffold00103 131675 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 131710 1 T G scaffold2590 Both SNP 0026.scaffold00103 131914 1 C T scaffold2590 ScafM INDEL 0026.scaffold00103 132055 2 .. AA scaffold2590 ReadM SNP 0026.scaffold00103 132211 1 A G - ReadM SNP 0026.scaffold00103 132245 1 G A - ReadM SNP 0026.scaffold00103 132388 1 C T - ReadM SNP 0026.scaffold00103 132419 1 G C - ReadM SNP 0026.scaffold00103 132551 1 C T - ReadM SNP 0026.scaffold00103 132558 1 C T - Both SNP 0026.scaffold00103 132877 1 T G scaffold2590 Both SNP 0026.scaffold00103 133002 1 C G scaffold2590 Both SNP 0026.scaffold00103 133004 1 C G scaffold2590 ReadM SNP 0026.scaffold00103 133029 1 C T - Both SNP 0026.scaffold00103 133647 1 T C scaffold2590 Both SNP 0026.scaffold00103 133889 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 133936 1 G C scaffold2590 Both SNP 0026.scaffold00103 134027 1 T C scaffold2590 Both SNP 0026.scaffold00103 134055 1 C G scaffold2590 Both INDEL 0026.scaffold00103 134073 1 G . scaffold2590 Both SNP 0026.scaffold00103 134137 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 134257 1 A G scaffold2590 ScafM INDEL 0026.scaffold00103 134266 2 .. AA scaffold2590 Both SNP 0026.scaffold00103 134532 1 C A scaffold2590 Both SNP 0026.scaffold00103 134830 1 A T scaffold2590 Both SNP 0026.scaffold00103 134942 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 135115 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 135153 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 135180 1 C G scaffold2590 ScafM SNP 0026.scaffold00103 135196 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 135210 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 135215 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 135236 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 135247 1 G T scaffold2590 ScafM INDEL 0026.scaffold00103 135252 1 . A scaffold2590 ScafM SNP 0026.scaffold00103 135266 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 135718 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 135731 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 135749 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 135753 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 135790 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 135805 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 135810 1 G C scaffold2590 ScafM SNP 0026.scaffold00103 135821 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 135841 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 135844 1 G T scaffold2590 ScafM SNP 0026.scaffold00103 135959 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 135970 1 T C scaffold2590 ScafM INDEL 0026.scaffold00103 135971 1 . T scaffold2590 ScafM SNP 0026.scaffold00103 135992 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 135997 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136012 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 136014 1 G T scaffold2590 ScafM SNP 0026.scaffold00103 136020 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 136023 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136032 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 136042 1 G C scaffold2590 ScafM SNP 0026.scaffold00103 136067 1 T G scaffold2590 ScafM INDEL 0026.scaffold00103 136074 2 .. AT scaffold2590 ScafM SNP 0026.scaffold00103 136082 1 A C scaffold2590 Both SNP 0026.scaffold00103 136104 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136242 2 CC GG scaffold2590 ScafM SNP 0026.scaffold00103 136256 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 136284 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136318 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 136322 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 136348 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 136354 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136357 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136363 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136366 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136385 1 C T scaffold2590 ScafM INDEL 0026.scaffold00103 136402 5 TTTAA ..... scaffold2590 ScafM SNP 0026.scaffold00103 136413 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136428 2 TT CC scaffold2590 ScafM INDEL 0026.scaffold00103 136433 1 C . scaffold2590 ScafM SNP 0026.scaffold00103 136439 2 AA GG scaffold2590 ScafM SNP 0026.scaffold00103 136461 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136480 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 136482 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136496 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 136516 1 T G scaffold2590 ScafM SNP 0026.scaffold00103 136548 1 C A scaffold2590 Both SNP 0026.scaffold00103 136561 1 A G scaffold2590 Both SNP 0026.scaffold00103 136599 1 C G scaffold2590 Both INDEL 0026.scaffold00103 136630 1 A . scaffold2590 ScafM SNP 0026.scaffold00103 136664 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 136674 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 136679 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136682 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 136684 1 G C scaffold2590 ScafM SNP 0026.scaffold00103 136720 1 T G scaffold2590 ScafM INDEL 0026.scaffold00103 136740 1 . C scaffold2590 ScafM INDEL 0026.scaffold00103 136749 1 . C scaffold2590 ScafM SNP 0026.scaffold00103 136789 1 A G scaffold2590 ScafM INDEL 0026.scaffold00103 136806 1 T . scaffold2590 ScafM SNP 0026.scaffold00103 136836 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 136850 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 136876 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 136899 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 136928 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 136931 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 136978 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137028 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 137061 2 TA GC scaffold2590 ScafM SNP 0026.scaffold00103 137092 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 137117 1 C G scaffold2590 ScafM SNP 0026.scaffold00103 137119 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137124 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 137128 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 137143 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137190 2 CT TC scaffold2590 ScafM SNP 0026.scaffold00103 137224 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 137245 1 G T scaffold2590 ScafM SNP 0026.scaffold00103 137247 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 137290 1 G A scaffold2590 Both SNP 0026.scaffold00103 137343 1 G A scaffold2590 ReadM SNP 0026.scaffold00103 137363 1 G A - ScafM SNP 0026.scaffold00103 137582 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137598 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137603 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 137653 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137660 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 137677 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 137679 1 C A scaffold2590 ScafM SNP 0026.scaffold00103 137700 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 137708 2 AA TG scaffold2590 ScafM INDEL 0026.scaffold00103 137714 4 .... ATAC scaffold2590 ScafM SNP 0026.scaffold00103 137720 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 137789 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 137791 1 G A scaffold2590 ScafM INDEL 0026.scaffold00103 137803 2 TA .. scaffold2590 ScafM SNP 0026.scaffold00103 137813 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 137840 1 T C scaffold2590 Both SNP 0026.scaffold00103 138122 1 G T scaffold2590 ScafM SNP 0026.scaffold00103 138183 1 A C scaffold2590 ScafM SNP 0026.scaffold00103 138212 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138219 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138291 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 138323 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 138325 3 CAT TGG scaffold2590 ScafM SNP 0026.scaffold00103 138331 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 138352 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 138372 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138443 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138465 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 138489 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 138505 1 T A scaffold2590 ScafM SNP 0026.scaffold00103 138510 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 138515 1 G C scaffold2590 ScafM SNP 0026.scaffold00103 138539 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 138548 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 138590 1 G T scaffold2590 ScafM SNP 0026.scaffold00103 138610 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 138619 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138626 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 138639 1 A G scaffold2590 ScafM SNP 0026.scaffold00103 138661 1 C T scaffold2590 ScafM SNP 0026.scaffold00103 138672 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 138684 1 G A scaffold2590 ScafM SNP 0026.scaffold00103 138716 1 T A scaffold2590 ReadM SNP 0026.scaffold00103 138743 1 C T - ReadM SNP 0026.scaffold00103 138781 1 A T - Both SNP 0026.scaffold00103 138836 1 A T scaffold2590 ScafM SNP 0026.scaffold00103 138881 1 T C scaffold2590 ScafM SNP 0026.scaffold00103 138886 1 C G scaffold2590 ScafM INDEL 0027.scaffold00104 7242 1 T . scaffold9161 ScafM SNP 0027.scaffold00104 13639 1 T A scaffold9161 ScafM INDEL 0027.scaffold00104 13678 1 . A scaffold9161 ScafM SNP 0027.scaffold00104 16996 1 T C scaffold9161 ScafM INDEL 0027.scaffold00104 57793 10 .......... GGGGGGGGGG scaffold2890 ScafM INDEL 0027.scaffold00104 64804 6 ATCTCT ...... scaffold2890 ScafM INDEL 0027.scaffold00104 64812 12 CTCTTCTTTCTT ............ scaffold2890 ScafM INDEL 0027.scaffold00104 64825 3 TTT .GG scaffold2890 ScafM INDEL 0027.scaffold00104 64830 15 TTTTTTCTTTTTTTA ............... scaffold2890 ScafM INDEL 0027.scaffold00104 87433 1 . A scaffold2890 ScafM SNP 0027.scaffold00104 109143 1 A G scaffold11286 ReadM INDEL 0027.scaffold00104 132310 1 . T - ScafM INDEL 0027.scaffold00104 137606 4 .... TTAC scaffold11286 ScafM INDEL 0027.scaffold00104 137891 1 . A scaffold2613 ScafM SNP 0027.scaffold00104 137935 2 CT AG scaffold2613 ScafM SNP 0027.scaffold00104 137942 1 G A scaffold2613 ScafM SNP 0027.scaffold00104 137961 2 TA AT scaffold2613 ScafM SNP 0027.scaffold00104 138049 1 T C scaffold2613 ScafM SNP 0027.scaffold00104 138187 1 G A scaffold2613 ScafM SNP 0027.scaffold00104 138190 1 C T scaffold2613 ScafM SNP 0027.scaffold00104 138205 1 C T scaffold2613 ScafM SNP 0027.scaffold00104 138207 1 G A scaffold2613 ScafM SNP 0027.scaffold00104 138314 1 A C scaffold2613 ScafM SNP 0027.scaffold00104 138316 1 C A scaffold2613 ScafM INDEL 0027.scaffold00104 138350 1 A . scaffold2613 ScafM SNP 0027.scaffold00104 138507 1 T C scaffold2613 ScafM SNP 0027.scaffold00104 138519 1 G C scaffold2613 ScafM SNP 0027.scaffold00104 138574 1 C G scaffold2613 ScafM SNP 0027.scaffold00104 138593 1 C T scaffold2613 ScafM SNP 0027.scaffold00104 138604 1 A G scaffold2613 ScafM SNP 0027.scaffold00104 138664 1 T C scaffold2613 ScafM SNP 0027.scaffold00104 138669 1 A G scaffold2613 ScafM SNP 0027.scaffold00104 138848 2 GG AA scaffold28777 ScafM SNP 0027.scaffold00104 139006 1 A C scaffold28777 ScafM SNP 0027.scaffold00104 139010 1 G A scaffold28777 ScafM INDEL 0027.scaffold00104 139012 1 C . scaffold28777 ScafM SNP 0027.scaffold00104 139020 1 A G scaffold28777 ScafM SNP 0027.scaffold00104 139088 1 T C scaffold28777 ScafM SNP 0027.scaffold00104 139128 1 C A scaffold28777 ScafM SNP 0027.scaffold00104 139151 1 A G scaffold28777 ScafM SNP 0027.scaffold00104 139192 1 C A scaffold28777 ScafM SNP 0027.scaffold00104 139208 1 C G scaffold28777 ScafM INDEL 0027.scaffold00104 139258 2 GT .. scaffold28777 ScafM INDEL 0027.scaffold00104 139262 1 A . scaffold28777 ScafM INDEL 0027.scaffold00104 139265 1 A . scaffold28777 ScafM SNP 0027.scaffold00104 139267 1 G A scaffold28777 ScafM SNP 0027.scaffold00104 139288 1 C T scaffold28777 ScafM INDEL 0027.scaffold00104 150223 1 . G scaffold11286 ScafM SNP 0027.scaffold00104 155853 1 T G scaffold11286 ScafM INDEL 0027.scaffold00104 160287 8 GTTTGGGC ........ scaffold11286 ScafM SNP 0027.scaffold00104 175363 1 T C scaffold11286 ReadM SNP 0027.scaffold00104 183294 1 C A - ReadM INDEL 0027.scaffold00104 221404 1 . A - ReadM INDEL 0027.scaffold00104 221410 1 . A - ScafM INDEL 0027.scaffold00104 229594 1 A . scaffold5792 ScafM SNP 0027.scaffold00104 229705 1 G A scaffold5792 ScafM INDEL 0027.scaffold00104 250611 1 . T scaffold5977 ScafM INDEL 0027.scaffold00104 258344 1 . A scaffold5977 ScafM INDEL 0027.scaffold00104 279710 1 . A scaffold5977 ScafM SNP 0027.scaffold00104 279909 1 A C scaffold8535 ScafM SNP 0027.scaffold00104 279916 1 T C scaffold8535 ScafM SNP 0027.scaffold00104 280513 1 T G scaffold5977 ScafM SNP 0027.scaffold00104 282813 1 G A scaffold5977 ScafM SNP 0027.scaffold00104 283857 1 T C scaffold5977 Both INDEL 0027.scaffold00104 322186 1 . A scaffold5994 ReadM SNP 0027.scaffold00104 324334 1 T A - ScafM INDEL 0027.scaffold00104 328093 1 . T scaffold5994 ReadM INDEL 0027.scaffold00104 330366 1 . A - ScafM SNP 0027.scaffold00104 336795 1 T G scaffold9811 ScafM INDEL 0027.scaffold00104 342366 1 . G scaffold5994 ScafM INDEL 0027.scaffold00104 342884 13 ............. ATGGAACAAACCA scaffold5994 ScafM SNP 0027.scaffold00104 342903 1 A G scaffold5994 ScafM SNP 0027.scaffold00104 342961 1 A G scaffold5994 ScafM SNP 0027.scaffold00104 342971 1 A C scaffold5994 ScafM SNP 0027.scaffold00104 343478 1 G T scaffold5994 ScafM SNP 0027.scaffold00104 345388 1 T C scaffold5994 ScafM SNP 0027.scaffold00104 345398 1 G A scaffold5994 ScafM SNP 0027.scaffold00104 345422 1 A C scaffold5994 ScafM SNP 0027.scaffold00104 345535 1 T G scaffold5994 ScafM SNP 0027.scaffold00104 345577 1 C T scaffold5994 ScafM SNP 0027.scaffold00104 345628 1 T G scaffold5994 ScafM INDEL 0027.scaffold00104 345633 1 . A scaffold5994 ScafM SNP 0027.scaffold00104 345643 1 C T scaffold5994 ScafM SNP 0027.scaffold00104 345648 1 A G scaffold5994 ScafM SNP 0027.scaffold00104 345662 1 C G scaffold5994 ScafM SNP 0027.scaffold00104 351543 1 C T scaffold11241 ScafM SNP 0027.scaffold00104 351598 1 A G scaffold11241 ScafM INDEL 0027.scaffold00104 382415 6 ...... AAAAAA scaffold2878 ScafM SNP 0027.scaffold00104 400353 1 T C scaffold2878 Both INDEL 0027.scaffold00104 406196 1 . A scaffold23371 ScafM SNP 0027.scaffold00104 406413 1 G A scaffold23371 ScafM SNP 0027.scaffold00104 407964 1 G C scaffold28020 ReadM INDEL 0027.scaffold00104 408249 1 . T - ScafM INDEL 0027.scaffold00104 408457 4 .... TAGT scaffold20433 ScafM INDEL 0027.scaffold00104 408458 2 .. GT scaffold20433 ScafM SNP 0027.scaffold00104 408474 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408476 1 A T scaffold20433 ScafM INDEL 0027.scaffold00104 408482 2 .. AT scaffold20433 ScafM INDEL 0027.scaffold00104 408485 1 . G scaffold20433 ScafM SNP 0027.scaffold00104 408495 1 A C scaffold20433 ScafM SNP 0027.scaffold00104 408521 1 A C scaffold20433 ScafM INDEL 0027.scaffold00104 408550 1 . A scaffold20433 ScafM SNP 0027.scaffold00104 408552 1 C T scaffold20433 ScafM SNP 0027.scaffold00104 408557 1 C T scaffold20433 ScafM SNP 0027.scaffold00104 408565 1 A C scaffold20433 ScafM SNP 0027.scaffold00104 408571 1 C G scaffold20433 ScafM SNP 0027.scaffold00104 408597 1 C G scaffold20433 ScafM SNP 0027.scaffold00104 408619 1 C T scaffold20433 ScafM SNP 0027.scaffold00104 408646 1 T A scaffold20433 ScafM SNP 0027.scaffold00104 408650 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408678 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408687 1 T G scaffold20433 ScafM SNP 0027.scaffold00104 408691 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408694 1 A T scaffold20433 ScafM SNP 0027.scaffold00104 408728 1 C T scaffold20433 ScafM SNP 0027.scaffold00104 408751 1 G A scaffold20433 ScafM SNP 0027.scaffold00104 408754 1 T C scaffold20433 ScafM SNP 0027.scaffold00104 408762 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408770 1 T C scaffold20433 ScafM SNP 0027.scaffold00104 408780 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408783 1 T A scaffold20433 ScafM SNP 0027.scaffold00104 408795 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408803 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408830 1 G A scaffold20433 ScafM SNP 0027.scaffold00104 408832 1 A T scaffold20433 ScafM SNP 0027.scaffold00104 408839 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408908 1 G A scaffold20433 ScafM SNP 0027.scaffold00104 408911 1 C A scaffold20433 ScafM SNP 0027.scaffold00104 408916 1 T A scaffold20433 ScafM SNP 0027.scaffold00104 408930 1 A G scaffold20433 ScafM SNP 0027.scaffold00104 408978 1 T G scaffold20433 ScafM INDEL 0027.scaffold00104 436470 1 . T scaffold21156 ScafM INDEL 0027.scaffold00104 443788 18 .................. GGGGGGGGGAGGGGGGGG scaffold21156 ScafM INDEL 0027.scaffold00104 467600 2 TA .. scaffold3647 ScafM SNP 0027.scaffold00104 473731 2 GC TA scaffold3647 ScafM SNP 0027.scaffold00104 473735 2 CC TA scaffold3647 ScafM SNP 0027.scaffold00104 473738 1 T A scaffold3647 ScafM INDEL 0027.scaffold00104 476500 1 . T scaffold3647 ScafM SNP 0027.scaffold00104 491964 1 G A scaffold7592 ScafM SNP 0027.scaffold00104 491967 1 G A scaffold7592 ScafM SNP 0027.scaffold00104 492003 2 TT CC scaffold7592 ScafM SNP 0027.scaffold00104 492054 1 T C scaffold7592 ScafM SNP 0027.scaffold00104 492115 1 C G scaffold7592 ScafM SNP 0027.scaffold00104 492220 1 T C scaffold7592 ScafM SNP 0027.scaffold00104 492229 1 G A scaffold7592 ScafM SNP 0027.scaffold00104 492481 1 T C scaffold7592 ScafM SNP 0027.scaffold00104 492487 1 A C scaffold7592 ScafM SNP 0027.scaffold00104 492508 1 C G scaffold7592 ScafM INDEL 0027.scaffold00104 493384 1 A . scaffold1953 ScafM SNP 0027.scaffold00104 493386 1 A T scaffold1953 Both INDEL 0027.scaffold00104 545219 1 . A scaffold9190 ScafM SNP 0027.scaffold00104 571395 1 T G scaffold13517 ScafM SNP 0027.scaffold00104 571544 1 G A scaffold13517 ScafM SNP 0027.scaffold00104 571550 1 A G scaffold13517 ScafM SNP 0027.scaffold00104 571569 1 T G scaffold13517 ScafM INDEL 0027.scaffold00104 571743 1 . A scaffold13517 ScafM SNP 0027.scaffold00104 571752 1 G A scaffold13517 ScafM SNP 0027.scaffold00104 571790 1 T G scaffold13517 ScafM SNP 0027.scaffold00104 571848 1 T C scaffold13517 ScafM SNP 0027.scaffold00104 572456 1 A G scaffold13517 ScafM SNP 0027.scaffold00104 572534 1 A G scaffold13517 ScafM SNP 0027.scaffold00104 572542 1 G A scaffold13517 ScafM SNP 0027.scaffold00104 575232 1 T C scaffold13517 ScafM SNP 0027.scaffold00104 575240 1 T A scaffold13517 ScafM INDEL 0027.scaffold00104 575275 1 . A scaffold13517 ScafM SNP 0027.scaffold00104 575305 1 T C scaffold13517 ScafM SNP 0027.scaffold00104 575339 2 AA TT scaffold13517 ScafM SNP 0027.scaffold00104 575343 1 G T scaffold13517 ScafM SNP 0027.scaffold00104 575346 1 A G scaffold13517 ScafM INDEL 0027.scaffold00104 575481 1 T . scaffold13517 ScafM INDEL 0027.scaffold00104 584036 1 . C scaffold13517 ScafM INDEL 0027.scaffold00104 590807 2 .. TT scaffold13517 ScafM INDEL 0027.scaffold00104 661298 1 A . scaffold19428 ReadM INDEL 0027.scaffold00104 661709 1 . A - ScafM INDEL 0027.scaffold00104 662729 1 . T scaffold19428 ScafM INDEL 0027.scaffold00104 662814 1 . T scaffold19428 ScafM SNP 0027.scaffold00104 698898 1 G A scaffold8228 ScafM SNP 0027.scaffold00104 699079 1 A G scaffold8228 ScafM INDEL 0027.scaffold00104 699592 2 TA .. scaffold8228 ScafM SNP 0027.scaffold00104 699651 2 CA AT scaffold8228 ScafM INDEL 0027.scaffold00104 715702 2 .. CC scaffold8228 ScafM INDEL 0027.scaffold00104 716527 9 GATATATCT ......... scaffold8228 ScafM INDEL 0027.scaffold00104 720022 1 . T scaffold8228 ScafM INDEL 0027.scaffold00104 721517 2 .. GG scaffold8228 Both INDEL 0027.scaffold00104 749068 2 TA .. scaffold3825 ScafM SNP 0027.scaffold00104 749239 1 T C scaffold3825 ScafM INDEL 0027.scaffold00104 762869 16 ................ CCCCCCCCCCCCCCCC scaffold3825 ScafM SNP 0027.scaffold00104 793092 1 A T scaffold13296 ScafM SNP 0027.scaffold00104 793106 1 G T scaffold13296 ScafM SNP 0027.scaffold00104 793111 1 C A scaffold13296 ScafM SNP 0027.scaffold00104 793122 1 G C scaffold13296 ScafM SNP 0027.scaffold00104 793141 1 A C scaffold13296 ScafM SNP 0027.scaffold00104 793151 1 C T scaffold13296 ScafM SNP 0027.scaffold00104 793189 1 C T scaffold13296 ScafM SNP 0027.scaffold00104 793194 1 G A scaffold13296 ScafM SNP 0027.scaffold00104 793220 1 T C scaffold13296 ScafM SNP 0027.scaffold00104 793225 1 G T scaffold13296 ScafM SNP 0027.scaffold00104 793240 1 A G scaffold13296 ScafM INDEL 0027.scaffold00104 793242 2 .. CC scaffold13296 ScafM INDEL 0027.scaffold00104 793244 8 ........ CCGTACCC scaffold13296 ScafM INDEL 0027.scaffold00104 793245 1 . A scaffold13296 ScafM INDEL 0027.scaffold00104 793247 1 . T scaffold13296 ScafM INDEL 0027.scaffold00104 793249 1 . C scaffold13296 ScafM SNP 0027.scaffold00104 793252 1 G C scaffold13296 ScafM SNP 0027.scaffold00104 793285 1 C T scaffold13296 ScafM SNP 0027.scaffold00104 793308 1 T A scaffold13296 ScafM SNP 0027.scaffold00104 793330 1 T A scaffold13296 ScafM INDEL 0027.scaffold00104 793340 1 G . scaffold13296 ScafM SNP 0027.scaffold00104 793348 1 G T scaffold13296 ScafM SNP 0027.scaffold00104 793352 1 G C scaffold13296 ScafM SNP 0027.scaffold00104 793421 1 G T scaffold13296 ScafM SNP 0027.scaffold00104 793431 1 T C scaffold13296 ScafM SNP 0027.scaffold00104 793443 1 G A scaffold13296 ScafM INDEL 0027.scaffold00104 793456 5 ACCAT ..... scaffold13296 ScafM SNP 0027.scaffold00104 793481 1 T A scaffold13296 ScafM SNP 0027.scaffold00104 793511 1 T C scaffold13296 ScafM INDEL 0027.scaffold00104 793545 2 .A TT scaffold13296 ScafM SNP 0027.scaffold00104 793548 1 A T scaffold13296 ScafM SNP 0027.scaffold00104 793555 1 G T scaffold13296 ScafM SNP 0027.scaffold00104 793557 3 AAA TTT scaffold13296 ScafM SNP 0027.scaffold00104 793565 1 T G scaffold13296 ScafM SNP 0027.scaffold00104 793576 1 A T scaffold13296 ScafM SNP 0027.scaffold00104 793578 1 A T scaffold13296 ScafM SNP 0027.scaffold00104 793624 1 C T scaffold13296 ScafM SNP 0027.scaffold00104 793649 1 A G scaffold13296 ScafM INDEL 0027.scaffold00104 793666 22 ...................... TGCAGACTGATGAATTATCATC scaffold13296 ScafM INDEL 0027.scaffold00104 793694 10 .......... CAACTCCCAA scaffold13296 ScafM SNP 0027.scaffold00104 793704 1 T C scaffold13296 ScafM INDEL 0027.scaffold00104 793747 2 .T CC scaffold13296 ScafM SNP 0027.scaffold00104 793813 2 AA GC scaffold13296 ScafM SNP 0027.scaffold00104 793822 1 G T scaffold13296 ScafM INDEL 0027.scaffold00104 793831 7 ....... TTAAGTA scaffold13296 ScafM SNP 0027.scaffold00104 793872 1 T A scaffold13296 ScafM INDEL 0027.scaffold00104 793936 2 AG .. scaffold13296 ScafM SNP 0027.scaffold00104 793943 1 C G scaffold13296 ScafM SNP 0027.scaffold00104 793975 1 C G scaffold13296 ScafM SNP 0027.scaffold00104 793985 1 T C scaffold13296 ScafM SNP 0027.scaffold00104 794074 1 T C scaffold13296 ScafM SNP 0027.scaffold00104 794125 1 C T scaffold13296 ScafM SNP 0027.scaffold00104 794171 1 A G scaffold13296 ScafM SNP 0027.scaffold00104 794367 1 A T scaffold13296 ScafM INDEL 0027.scaffold00104 794398 20 TTATGTAAATCAAATAACAC .................... scaffold13296 ScafM INDEL 0027.scaffold00104 816302 1 . A scaffold5645 ScafM INDEL 0027.scaffold00104 816683 19 ................... AAAAAAAAAAAATAAAAAA scaffold5645 ScafM SNP 0027.scaffold00104 848143 1 T G scaffold604 ScafM SNP 0027.scaffold00104 848632 1 A C scaffold6159 ScafM INDEL 0027.scaffold00104 848641 1 T . scaffold6159 ScafM SNP 0027.scaffold00104 848644 1 A G scaffold6159 ScafM SNP 0027.scaffold00104 848665 1 G A scaffold6159 ScafM SNP 0027.scaffold00104 848675 1 T A scaffold6159 ScafM SNP 0027.scaffold00104 848687 1 A G scaffold6159 ScafM SNP 0027.scaffold00104 848698 1 T C scaffold6159 ScafM SNP 0027.scaffold00104 851514 1 C T scaffold2863 ScafM SNP 0027.scaffold00104 851558 1 T C scaffold2863 ScafM SNP 0027.scaffold00104 851565 1 C T scaffold2863 ScafM SNP 0027.scaffold00104 876133 1 G A scaffold2863 ScafM SNP 0027.scaffold00104 876196 1 G C scaffold2863 ScafM SNP 0027.scaffold00104 876532 1 C T scaffold2863 ScafM SNP 0027.scaffold00104 876544 1 G A scaffold2863 ScafM SNP 0027.scaffold00104 876683 1 T A scaffold2863 ScafM SNP 0027.scaffold00104 881717 1 A G scaffold2863 ScafM INDEL 0027.scaffold00104 881719 10 ATCCCCTCAT .......... scaffold2863 ScafM INDEL 0027.scaffold00104 881730 2 TT .. scaffold2863 ScafM INDEL 0027.scaffold00104 881733 6 TTTTCT ...... scaffold2863 ScafM INDEL 0027.scaffold00104 881740 8 TTTTTTTT .......G scaffold2863 ScafM SNP 0027.scaffold00104 881751 1 T G scaffold2863 ScafM SNP 0027.scaffold00104 881753 1 G A scaffold2863 ScafM SNP 0027.scaffold00104 881757 1 A G scaffold2863 ScafM INDEL 0027.scaffold00104 905029 1 . A scaffold2863 ScafM INDEL 0027.scaffold00104 916117 18 .................. AAAAAAAAAAAAAAAAAA scaffold2863 ScafM SNP 0027.scaffold00104 917196 1 A T scaffold2863 ScafM INDEL 0027.scaffold00104 920083 9 ......... TTTTTTTTT scaffold2863 ScafM INDEL 0027.scaffold00104 922539 1 . T scaffold2863 ReadM SNP 0027.scaffold00104 923455 1 G T - ScafM SNP 0027.scaffold00104 960019 1 A G scaffold15288 ScafM SNP 0027.scaffold00104 960385 1 A G scaffold15288 ScafM SNP 0027.scaffold00104 960401 1 G C scaffold15288 ScafM SNP 0027.scaffold00104 960455 1 C T scaffold15288 ScafM SNP 0027.scaffold00104 960457 1 C T scaffold15288 ScafM SNP 0027.scaffold00104 985766 1 G T scaffold8356 ScafM INDEL 0027.scaffold00104 1012285 2 .. AA scaffold592 ScafM SNP 0027.scaffold00104 1020069 1 T C scaffold38205 ScafM SNP 0027.scaffold00104 1020233 1 G A scaffold38205 ScafM SNP 0027.scaffold00104 1020245 1 A T scaffold38205 ScafM INDEL 0027.scaffold00104 1020247 3 GAT ... scaffold38205 ScafM INDEL 0027.scaffold00104 1020267 3 ... GAA scaffold38205 ScafM SNP 0027.scaffold00104 1020289 1 T C scaffold38205 ScafM SNP 0027.scaffold00104 1020293 1 G T scaffold38205 ScafM SNP 0027.scaffold00104 1020298 1 A G scaffold38205 ScafM SNP 0027.scaffold00104 1020346 1 A G scaffold38205 ScafM SNP 0027.scaffold00104 1024458 1 A T scaffold11620 ScafM SNP 0027.scaffold00104 1024461 1 C T scaffold11620 ScafM INDEL 0027.scaffold00104 1031371 15 ............... CCCCCCCCCCCCCCC scaffold11620 ScafM SNP 0027.scaffold00104 1058816 1 A G scaffold11620 ScafM SNP 0027.scaffold00104 1060533 1 G A scaffold11620 ScafM INDEL 0027.scaffold00104 1061181 1 . T scaffold11620 ScafM INDEL 0027.scaffold00104 1089191 5 ..... GCAAA scaffold3498 ReadM INDEL 0027.scaffold00104 1093805 1 . A - ScafM SNP 0027.scaffold00104 1099005 2 TT GA scaffold1426 ScafM SNP 0027.scaffold00104 1111629 1 C G scaffold26441 ScafM SNP 0027.scaffold00104 1111680 2 AA GC scaffold26441 ScafM SNP 0027.scaffold00104 1111687 1 G C scaffold26441 ScafM SNP 0027.scaffold00104 1111698 1 A G scaffold26441 ScafM SNP 0027.scaffold00104 1111701 1 C T scaffold26441 ScafM SNP 0027.scaffold00104 1111707 1 T C scaffold26441 ScafM SNP 0027.scaffold00104 1111741 1 C T scaffold26441 ScafM SNP 0027.scaffold00104 1238767 1 C T scaffold9300 ScafM SNP 0027.scaffold00104 1238770 1 G T scaffold9300 ScafM SNP 0027.scaffold00104 1245971 1 A T scaffold9300 ScafM INDEL 0027.scaffold00104 1249203 7 ....... CTGTTTC scaffold9300 ScafM SNP 0027.scaffold00104 1249204 3 AAA TTT scaffold9300 ScafM SNP 0027.scaffold00104 1249208 1 T G scaffold9300 ScafM INDEL 0027.scaffold00104 1249214 1 . C scaffold9300 ScafM INDEL 0027.scaffold00104 1249215 1 . T scaffold9300 ScafM INDEL 0027.scaffold00104 1249217 4 .... TTGA scaffold9300 ScafM INDEL 0027.scaffold00104 1249219 3 ... TTT scaffold9300 ScafM SNP 0027.scaffold00104 1249221 1 A T scaffold9300 ScafM INDEL 0027.scaffold00104 1249224 1 . T scaffold9300 ScafM SNP 0027.scaffold00104 1249226 1 C T scaffold9300 ScafM SNP 0027.scaffold00104 1249229 1 T C scaffold9300 ScafM INDEL 0027.scaffold00104 1249231 2 .. CG scaffold9300 ScafM SNP 0027.scaffold00104 1249234 1 C T scaffold9300 ScafM INDEL 0027.scaffold00104 1249241 1 . C scaffold9300 ScafM SNP 0027.scaffold00104 1249243 1 T G scaffold9300 ScafM INDEL 0027.scaffold00104 1249245 1 . A scaffold9300 ScafM INDEL 0027.scaffold00104 1249246 3 ... TCA scaffold9300 ScafM INDEL 0027.scaffold00104 1249249 6 ...... ACCTCA scaffold9300 ScafM INDEL 0027.scaffold00104 1249251 1 . T scaffold9300 ScafM INDEL 0027.scaffold00104 1249252 2 .. TT scaffold9300 ScafM INDEL 0027.scaffold00104 1249255 1 . G scaffold9300 ScafM INDEL 0027.scaffold00104 1249259 2 .T GA scaffold9300 ScafM INDEL 0027.scaffold00104 1249262 1 . A scaffold9300 ScafM INDEL 0027.scaffold00104 1249264 1 . A scaffold9300 ScafM SNP 0027.scaffold00104 1249266 1 T A scaffold9300 ScafM INDEL 0027.scaffold00104 1249269 1 . T scaffold9300 ScafM SNP 0027.scaffold00104 1250025 1 T A scaffold9300 ScafM SNP 0027.scaffold00104 1251173 1 G A scaffold9300 ScafM SNP 0027.scaffold00104 1251188 1 C A scaffold9300 ScafM SNP 0027.scaffold00104 1258135 1 C A scaffold9300 ScafM SNP 0027.scaffold00104 1258137 1 C G scaffold9300 ScafM SNP 0027.scaffold00104 1260398 1 A G scaffold15158 ScafM SNP 0027.scaffold00104 1260425 1 T C scaffold15158 ScafM SNP 0027.scaffold00104 1261942 1 T C scaffold9300 ScafM SNP 0027.scaffold00104 1261975 1 C A scaffold9300 ScafM SNP 0027.scaffold00104 1261991 1 A G scaffold9300 ReadM INDEL 0027.scaffold00104 1266181 1 . A - ReadM INDEL 0028.scaffold00107 2141 1 . T - ScafM INDEL 0028.scaffold00107 15713 1 . G scaffold12985 ScafM SNP 0028.scaffold00107 15762 1 A T scaffold12985 ScafM INDEL 0028.scaffold00107 15785 1 . T scaffold12985 ScafM SNP 0028.scaffold00107 19320 1 T C scaffold17178 ScafM INDEL 0028.scaffold00107 19367 1 . C scaffold17178 ScafM SNP 0028.scaffold00107 19386 1 T G scaffold17178 ScafM SNP 0028.scaffold00107 19398 1 A G scaffold17178 ScafM SNP 0028.scaffold00107 19405 1 T A scaffold17178 ScafM SNP 0028.scaffold00107 19408 1 T G scaffold17178 ScafM SNP 0028.scaffold00107 19425 1 A G scaffold17178 ReadM SNP 0028.scaffold00107 40509 1 G T - ScafM SNP 0028.scaffold00107 51463 1 T C scaffold21666 ScafM SNP 0028.scaffold00107 51501 2 AA TC scaffold21666 ScafM SNP 0028.scaffold00107 51506 1 A G scaffold21666 ScafM INDEL 0028.scaffold00107 51513 1 G . scaffold21666 ScafM SNP 0028.scaffold00107 51596 1 C T scaffold21666 ScafM SNP 0028.scaffold00107 51680 1 A G scaffold21666 ScafM SNP 0028.scaffold00107 57765 1 G A scaffold19005 ScafM SNP 0028.scaffold00107 57769 1 T A scaffold19005 ScafM SNP 0028.scaffold00107 57774 1 A G scaffold19005 ScafM SNP 0028.scaffold00107 57801 1 T G scaffold19005 ScafM SNP 0028.scaffold00107 57861 1 A T scaffold19005 ScafM SNP 0028.scaffold00107 57979 1 A G scaffold19005 ScafM SNP 0028.scaffold00107 57988 1 A G scaffold19005 ScafM SNP 0028.scaffold00107 58044 1 C T scaffold19005 ScafM SNP 0028.scaffold00107 58057 1 C T scaffold19005 ScafM SNP 0028.scaffold00107 58061 1 G C scaffold19005 ScafM SNP 0028.scaffold00107 58183 1 T C scaffold19005 ScafM SNP 0028.scaffold00107 58204 1 A C scaffold19005 ScafM SNP 0028.scaffold00107 58216 1 A G scaffold19005 ScafM SNP 0028.scaffold00107 58231 1 C T scaffold19005 ScafM SNP 0028.scaffold00107 58246 1 G C scaffold19005 ScafM SNP 0028.scaffold00107 58311 1 G T scaffold19005 ScafM SNP 0028.scaffold00107 58393 1 C G scaffold19005 ScafM SNP 0028.scaffold00107 58421 1 C G scaffold19005 ScafM SNP 0028.scaffold00107 58580 1 A G scaffold19005 ScafM SNP 0028.scaffold00107 58622 1 T A scaffold19005 ScafM INDEL 0028.scaffold00107 58635 1 A . scaffold19005 ScafM SNP 0028.scaffold00107 58644 1 T C scaffold19005 ScafM SNP 0028.scaffold00107 58752 1 A T scaffold19005 ScafM SNP 0028.scaffold00107 58779 1 G T scaffold19005 ScafM SNP 0028.scaffold00107 58887 1 C T scaffold19005 ScafM SNP 0028.scaffold00107 58958 1 C T scaffold19005 ScafM SNP 0028.scaffold00107 59154 1 G A scaffold19005 ScafM SNP 0028.scaffold00107 59182 1 T G scaffold19005 ScafM SNP 0028.scaffold00107 59271 1 A G scaffold19005 ReadM INDEL 0028.scaffold00107 73947 1 . T - ScafM SNP 0028.scaffold00107 75093 1 C T scaffold1871 ScafM SNP 0028.scaffold00107 75186 1 C T scaffold1871 ScafM SNP 0028.scaffold00107 75212 1 G A scaffold1871 ScafM SNP 0028.scaffold00107 76917 1 A C scaffold26181 ScafM INDEL 0028.scaffold00107 76986 1 . C scaffold26181 ScafM SNP 0028.scaffold00107 76990 1 C T scaffold26181 ScafM SNP 0028.scaffold00107 77005 1 G A scaffold26181 ScafM SNP 0028.scaffold00107 77059 1 T C scaffold26181 ScafM INDEL 0028.scaffold00107 77064 1 . T scaffold26181 ScafM SNP 0028.scaffold00107 77194 1 C A scaffold26181 ScafM SNP 0028.scaffold00107 79007 1 G A scaffold133 ScafM SNP 0028.scaffold00107 79016 1 G A scaffold133 ScafM SNP 0028.scaffold00107 79019 1 A G scaffold133 ScafM SNP 0028.scaffold00107 79025 1 A C scaffold133 ScafM SNP 0028.scaffold00107 79027 1 G A scaffold133 ScafM SNP 0028.scaffold00107 79098 1 C T scaffold133 ScafM INDEL 0028.scaffold00107 86737 14 .............. GAGGGGGGGGGGGG scaffold1009 ScafM INDEL 0028.scaffold00107 99238 1 . T scaffold1009 ScafM INDEL 0028.scaffold00107 110957 2 TT .. scaffold1009 ScafM INDEL 0028.scaffold00107 133411 1 A . scaffold1009 ScafM SNP 0028.scaffold00107 133413 1 A T scaffold1009 ScafM SNP 0028.scaffold00107 133416 1 G A scaffold1009 ScafM SNP 0028.scaffold00107 133423 1 T C scaffold1009 ScafM SNP 0028.scaffold00107 133426 1 T G scaffold1009 ScafM SNP 0028.scaffold00107 133478 2 AC CT scaffold1009 ReadM SNP 0028.scaffold00107 135620 1 G A - ScafM SNP 0028.scaffold00107 138187 1 T G scaffold12208 ScafM SNP 0028.scaffold00107 138192 2 TA AG scaffold12208 ScafM SNP 0028.scaffold00107 138242 1 T G scaffold12208 ScafM SNP 0028.scaffold00107 138386 1 T C scaffold1734 ScafM SNP 0028.scaffold00107 138392 1 C G scaffold1734 ScafM SNP 0028.scaffold00107 138462 1 C G scaffold1734 ScafM SNP 0028.scaffold00107 138641 1 T C scaffold1734 ScafM INDEL 0028.scaffold00107 138647 1 A . scaffold1734 ScafM SNP 0028.scaffold00107 138649 1 A C scaffold1734 ReadM SNP 0028.scaffold00107 157020 1 A C - ScafM SNP 0028.scaffold00107 173472 1 C G scaffold9497 ScafM SNP 0028.scaffold00107 173496 1 T C scaffold9497 ScafM SNP 0028.scaffold00107 173530 1 T C scaffold9497 ScafM SNP 0028.scaffold00107 173551 1 A C scaffold9497 ScafM INDEL 0028.scaffold00107 173556 16 ................ GTCGCTGTGTTTTCAG scaffold9497 ScafM SNP 0028.scaffold00107 173634 1 T C scaffold9497 ScafM SNP 0028.scaffold00107 188988 1 T G scaffold1009 ScafM SNP 0028.scaffold00107 188990 1 A G scaffold1009 ScafM SNP 0028.scaffold00107 188993 1 A G scaffold1009 ScafM INDEL 0028.scaffold00107 208726 1 . A scaffold1316 ScafM INDEL 0028.scaffold00107 220607 1 . T scaffold1316 ScafM INDEL 0028.scaffold00107 221289 1 A . scaffold1316 ScafM SNP 0028.scaffold00107 224637 1 C T scaffold1316 ScafM SNP 0028.scaffold00107 224741 1 C T scaffold1316 ScafM SNP 0028.scaffold00107 281916 1 A C scaffold10335 ScafM SNP 0028.scaffold00107 304035 1 C T scaffold10335 ScafM SNP 0028.scaffold00107 304037 1 T A scaffold10335 ScafM SNP 0028.scaffold00107 304039 2 GA AT scaffold10335 ScafM SNP 0028.scaffold00107 304044 1 G A scaffold10335 ScafM SNP 0028.scaffold00107 304048 3 TTT AAA scaffold10335 ScafM INDEL 0028.scaffold00107 304052 4 TCTA .... scaffold10335 ReadM INDEL 0028.scaffold00107 340475 1 T . - ScafM SNP 0028.scaffold00107 351988 1 A G scaffold24010 ScafM SNP 0028.scaffold00107 352009 1 C T scaffold24010 ScafM SNP 0028.scaffold00107 352017 1 T C scaffold24010 ScafM SNP 0028.scaffold00107 352036 1 C G scaffold24010 ScafM INDEL 0028.scaffold00107 352054 1 . C scaffold24010 ScafM SNP 0028.scaffold00107 352079 2 AC TT scaffold24010 ScafM INDEL 0028.scaffold00107 352087 1 . A scaffold24010 ReadM INDEL 0028.scaffold00107 352089 1 . T - ScafM INDEL 0028.scaffold00107 356433 1 . C scaffold24010 ScafM INDEL 0028.scaffold00107 356442 1 C . scaffold24010 ScafM INDEL 0028.scaffold00107 356450 1 . C scaffold24010 ScafM INDEL 0028.scaffold00107 356468 1 A . scaffold24010 ScafM SNP 0028.scaffold00107 356481 1 C A scaffold24010 ScafM INDEL 0028.scaffold00107 356489 1 . T scaffold24010 ScafM SNP 0028.scaffold00107 356496 1 A C scaffold24010 ScafM SNP 0028.scaffold00107 356498 1 C A scaffold24010 ScafM INDEL 0028.scaffold00107 356517 1 A . scaffold24010 ScafM INDEL 0028.scaffold00107 356520 2 GT .. scaffold24010 ScafM INDEL 0028.scaffold00107 356980 2 TT .. scaffold4406 ScafM SNP 0028.scaffold00107 356997 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357016 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357030 1 A G scaffold4406 ScafM SNP 0028.scaffold00107 357033 2 AT GC scaffold4406 ScafM SNP 0028.scaffold00107 357046 1 G A scaffold4406 ScafM SNP 0028.scaffold00107 357057 1 T C scaffold4406 ScafM SNP 0028.scaffold00107 357066 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357072 1 T G scaffold4406 ScafM SNP 0028.scaffold00107 357081 1 T C scaffold4406 ScafM SNP 0028.scaffold00107 357122 1 T C scaffold4406 ScafM SNP 0028.scaffold00107 357148 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357166 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357168 1 A G scaffold4406 ScafM SNP 0028.scaffold00107 357171 1 A T scaffold4406 ScafM SNP 0028.scaffold00107 357185 1 A G scaffold4406 ScafM SNP 0028.scaffold00107 357190 1 C T scaffold4406 ScafM SNP 0028.scaffold00107 357194 1 T C scaffold4406 ScafM SNP 0028.scaffold00107 357206 1 G T scaffold4406 ScafM INDEL 0028.scaffold00107 357219 1 . T scaffold4406 ScafM INDEL 0028.scaffold00107 357221 1 . T scaffold4406 ScafM SNP 0028.scaffold00107 357224 1 T A scaffold4406 ScafM SNP 0028.scaffold00107 357227 1 A T scaffold4406 ScafM SNP 0028.scaffold00107 357232 1 A G scaffold4406 ScafM INDEL 0028.scaffold00107 383810 18 .................. CCCCCCCCCCCCCCCCCC scaffold17329 ScafM INDEL 0028.scaffold00107 387748 36 .................................... GTTTTTTTTTTTTTTTTTGGGGGGAGGGGGGGGGGG scaffold17329 ScafM INDEL 0028.scaffold00107 388514 2 .. AA scaffold17329 ScafM SNP 0028.scaffold00107 389922 1 A C scaffold17329 ScafM SNP 0028.scaffold00107 389937 3 CCC AAA scaffold17329 ScafM SNP 0028.scaffold00107 389946 5 CCCCC AAAAA scaffold17329 ScafM INDEL 0028.scaffold00107 389951 5 ..... AAAAA scaffold17329 ScafM SNP 0028.scaffold00107 405768 1 C T scaffold17329 ScafM SNP 0028.scaffold00107 405806 1 A C scaffold17329 ScafM SNP 0028.scaffold00107 406767 1 C A scaffold33326 ScafM SNP 0028.scaffold00107 406780 1 A T scaffold33326 ScafM SNP 0028.scaffold00107 406783 1 T C scaffold33326 ScafM INDEL 0028.scaffold00107 406787 1 . A scaffold33326 ScafM INDEL 0028.scaffold00107 407037 3 ... AAC scaffold33326 ScafM SNP 0028.scaffold00107 407044 1 A G scaffold33326 ScafM SNP 0028.scaffold00107 407054 1 C T scaffold33326 ScafM SNP 0028.scaffold00107 407144 1 G A scaffold33326 ScafM SNP 0028.scaffold00107 407154 1 G A scaffold33326 ScafM SNP 0028.scaffold00107 407180 1 A G scaffold33326 ScafM INDEL 0028.scaffold00107 449539 3 TCT ... scaffold1260 ScafM INDEL 0028.scaffold00107 449544 2 TA .. scaffold1260 ScafM INDEL 0028.scaffold00107 449548 1 T . scaffold1260 ScafM INDEL 0028.scaffold00107 449551 35 ATATATTTGATTTTTCTAATATTTTTTGTCTACTA ................................... scaffold1260 ScafM INDEL 0028.scaffold00107 475235 7 ....... AAGGGGG scaffold1260 ScafM INDEL 0028.scaffold00107 477232 20 .................... CCCCCCCCCCCCCCCCCCCC scaffold1260 ScafM SNP 0028.scaffold00107 537970 1 T C scaffold1260 ScafM INDEL 0028.scaffold00107 538407 1 T . scaffold1260 ScafM INDEL 0028.scaffold00107 538432 1 T . scaffold1260 ScafM INDEL 0028.scaffold00107 539905 1 . A scaffold1260 ReadM INDEL 0028.scaffold00107 543983 1 A . - ScafM SNP 0028.scaffold00107 589838 1 A G scaffold32356 ScafM SNP 0028.scaffold00107 589852 1 G A scaffold32356 ScafM SNP 0028.scaffold00107 589881 1 T C scaffold32356 ScafM SNP 0028.scaffold00107 589902 1 A C scaffold32356 ScafM SNP 0028.scaffold00107 589905 1 A C scaffold32356 ScafM SNP 0028.scaffold00107 597367 1 C T scaffold14737 ScafM INDEL 0028.scaffold00107 599866 3 TAA ... scaffold4602 ScafM SNP 0028.scaffold00107 599877 1 T C scaffold4602 ScafM SNP 0028.scaffold00107 599903 1 G C scaffold4602 ScafM SNP 0028.scaffold00107 599924 2 TT AC scaffold4602 ScafM SNP 0028.scaffold00107 599935 1 T C scaffold4602 ScafM SNP 0028.scaffold00107 599953 1 A T scaffold4602 ScafM SNP 0028.scaffold00107 599982 1 G C scaffold4602 ScafM INDEL 0028.scaffold00107 635520 2 .. AA scaffold16099 ScafM INDEL 0028.scaffold00107 637068 1 . A scaffold16099 ScafM INDEL 0028.scaffold00107 639527 2 AA .. scaffold16099 ScafM SNP 0028.scaffold00107 676991 1 G C scaffold22925 ScafM SNP 0028.scaffold00107 677002 1 G C scaffold22925 ScafM SNP 0028.scaffold00107 677016 1 C T scaffold22925 ScafM SNP 0028.scaffold00107 698632 1 A G scaffold7014 ScafM SNP 0028.scaffold00107 698640 1 C A scaffold7014 ScafM INDEL 0028.scaffold00107 698661 1 . C scaffold7014 ScafM INDEL 0028.scaffold00107 700234 6 ...... CCCCCC scaffold2614 ScafM SNP 0028.scaffold00107 700236 1 T C scaffold2614 ScafM INDEL 0028.scaffold00107 700238 1 . T scaffold2614 ReadM SNP 0028.scaffold00107 707885 1 C A - ScafM INDEL 0028.scaffold00107 716619 36 CTACAGCCACAGCCACAGCCACAGCCACAGCCACAG .................................... scaffold2614 ScafM SNP 0028.scaffold00107 742711 1 T C scaffold2614 ScafM SNP 0028.scaffold00107 743124 1 C T scaffold2614 ScafM SNP 0028.scaffold00107 743206 1 A G scaffold2614 ScafM SNP 0028.scaffold00107 743733 1 T C scaffold2614 ScafM SNP 0028.scaffold00107 743735 1 G T scaffold2614 ScafM SNP 0028.scaffold00107 744170 1 T C scaffold2614 ScafM SNP 0028.scaffold00107 746199 1 T C scaffold2614 ScafM INDEL 0028.scaffold00107 795594 1 G . scaffold2614 ScafM INDEL 0028.scaffold00107 795618 1 . G scaffold2614 ScafM INDEL 0028.scaffold00107 795638 1 G . scaffold2614 ScafM INDEL 0028.scaffold00107 795640 1 G . scaffold2614 ScafM INDEL 0028.scaffold00107 795645 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795650 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795658 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795668 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795673 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795680 2 .. CA scaffold2614 ScafM INDEL 0028.scaffold00107 795713 2 .. CT scaffold2614 ScafM INDEL 0028.scaffold00107 795720 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795723 1 . C scaffold2614 ScafM INDEL 0028.scaffold00107 795764 1 C . scaffold2614 ScafM INDEL 0028.scaffold00107 795785 1 C . scaffold2614 ScafM INDEL 0028.scaffold00107 795848 1 C . scaffold2614 ScafM INDEL 0028.scaffold00107 795852 2 .. CC scaffold2614 ScafM INDEL 0028.scaffold00107 799262 1 . T scaffold2614 ScafM SNP 0028.scaffold00107 799431 2 CA AC scaffold2614 ReadM INDEL 0028.scaffold00107 816678 1 . T - ScafM INDEL 0028.scaffold00107 822372 3 ... TTT scaffold2614 ScafM INDEL 0028.scaffold00107 828000 1 . A scaffold2614 ScafM INDEL 0028.scaffold00107 838031 6 ...... CCCCCC scaffold15937 ScafM INDEL 0028.scaffold00107 843774 1 . T scaffold15937 ReadM INDEL 0028.scaffold00107 852806 1 T . - ScafM SNP 0028.scaffold00107 853002 1 T A scaffold15937 ScafM SNP 0028.scaffold00107 853011 1 T A scaffold15937 ScafM INDEL 0028.scaffold00107 853031 1 . C scaffold15937 ScafM SNP 0028.scaffold00107 853035 1 T A scaffold15937 ScafM INDEL 0028.scaffold00107 853110 1 . T scaffold15937 ReadM INDEL 0028.scaffold00107 856022 1 . G - ScafM INDEL 0028.scaffold00107 875695 2 TT .. scaffold6013 ScafM INDEL 0028.scaffold00107 884695 3 CGG ... scaffold6013 ScafM INDEL 0028.scaffold00107 884699 2 TT .A scaffold6013 ScafM SNP 0028.scaffold00107 884702 1 T G scaffold6013 ScafM SNP 0028.scaffold00107 884705 3 TGG CCA scaffold6013 ScafM SNP 0028.scaffold00107 884709 1 G C scaffold6013 ScafM INDEL 0028.scaffold00107 884711 2 TG .. scaffold6013 ScafM INDEL 0028.scaffold00107 884715 3 TTC ... scaffold6013 ScafM SNP 0028.scaffold00107 884719 1 G A scaffold6013 ScafM INDEL 0028.scaffold00107 884721 2 TG .. scaffold6013 ScafM INDEL 0028.scaffold00107 884725 2 CT .. scaffold6013 ScafM INDEL 0028.scaffold00107 884733 1 A . scaffold6013 ScafM SNP 0028.scaffold00107 884735 2 CC TA scaffold6013 ScafM INDEL 0028.scaffold00107 906827 30 .............................. CCCTTTAAAACCCGCCCCTCCCCCCCCCCC scaffold6013 ReadM SNP 0028.scaffold00107 912047 1 A C - ScafM INDEL 0028.scaffold00107 920166 17 ................. CTTGAGCACCCCCCCCC scaffold6013 ScafM INDEL 0028.scaffold00107 933917 4 .... CAAC scaffold6013 ScafM SNP 0028.scaffold00107 933919 1 T C scaffold6013 ReadM SNP 0028.scaffold00107 960968 1 T A - ScafM INDEL 0028.scaffold00107 967442 1 . T scaffold8184 ScafM INDEL 0028.scaffold00107 967454 1 . T scaffold8184 ScafM INDEL 0028.scaffold00107 973814 1 . T scaffold8184 ScafM INDEL 0028.scaffold00107 974294 1 . A scaffold8184 ScafM INDEL 0028.scaffold00107 974302 1 . A scaffold8184 ScafM INDEL 0028.scaffold00107 974706 1 . A scaffold8184 ScafM INDEL 0028.scaffold00107 974790 1 . T scaffold8184 ScafM INDEL 0028.scaffold00107 1035158 13 ............. TTCGTACGTTGTT scaffold18054 Both SNP 0028.scaffold00107 1039734 1 A C scaffold18054 ScafM SNP 0028.scaffold00107 1045900 1 C T scaffold18054 ScafM INDEL 0028.scaffold00107 1046380 9 GTTTTGGTA ......... scaffold18054 ScafM SNP 0028.scaffold00107 1046653 1 A C scaffold18054 ScafM SNP 0028.scaffold00107 1046763 1 A G scaffold18054 ScafM SNP 0028.scaffold00107 1046780 1 G A scaffold18054 ScafM SNP 0028.scaffold00107 1046817 1 A G scaffold18054 ScafM SNP 0028.scaffold00107 1046819 1 A T scaffold18054 ScafM SNP 0028.scaffold00107 1046856 1 A C scaffold18054 ScafM SNP 0028.scaffold00107 1046863 1 T C scaffold18054 ScafM SNP 0028.scaffold00107 1046895 1 C T scaffold18054 ScafM SNP 0028.scaffold00107 1046918 1 T A scaffold18054 ScafM SNP 0028.scaffold00107 1047021 1 C T scaffold18054 ScafM INDEL 0028.scaffold00107 1047769 1 A . scaffold18054 ScafM INDEL 0028.scaffold00107 1060093 14 .............. CTACCCCCCCCCCC scaffold18054 ScafM INDEL 0028.scaffold00107 1060096 13 ............. TTCCCCCCCCCCC scaffold18054 ScafM SNP 0028.scaffold00107 1060097 1 A C scaffold18054 ScafM SNP 0028.scaffold00107 1063372 1 T A scaffold18054 ScafM SNP 0028.scaffold00107 1063376 1 C T scaffold18054 ScafM INDEL 0028.scaffold00107 1079486 1 . T scaffold2837 ScafM INDEL 0028.scaffold00107 1092733 10 .......... GGGGGGGGGG scaffold2837 ScafM INDEL 0028.scaffold00107 1117288 1 . A scaffold2837 ReadM INDEL 0028.scaffold00107 1194480 1 A . - ReadM INDEL 0028.scaffold00107 1194489 1 T . - ScafM SNP 0028.scaffold00107 1195660 1 G C scaffold11872 ScafM SNP 0028.scaffold00107 1201371 1 C T scaffold11872 ScafM SNP 0029.scaffold00112 12372 1 A T scaffold21772 ScafM INDEL 0029.scaffold00112 12634 4 ATCT .... scaffold21772 ScafM INDEL 0029.scaffold00112 12646 3 TAG ... scaffold21772 ScafM SNP 0029.scaffold00112 12650 1 C T scaffold21772 ScafM SNP 0029.scaffold00112 13304 1 G C scaffold17793 ScafM INDEL 0029.scaffold00112 13614 1 . A scaffold17793 ScafM SNP 0029.scaffold00112 13635 1 G C scaffold17793 ScafM SNP 0029.scaffold00112 13644 1 A G scaffold17793 ScafM SNP 0029.scaffold00112 13696 1 C T scaffold17793 ScafM SNP 0029.scaffold00112 13720 1 T C scaffold17793 ScafM SNP 0029.scaffold00112 13816 1 A T scaffold17793 ScafM SNP 0029.scaffold00112 13856 1 C T scaffold17793 ScafM SNP 0029.scaffold00112 13947 1 G T scaffold17793 ScafM SNP 0029.scaffold00112 14010 1 C A scaffold17793 ScafM INDEL 0029.scaffold00112 14033 7 ....... GGCATCA scaffold17793 ScafM SNP 0029.scaffold00112 14171 1 A T scaffold17793 ScafM SNP 0029.scaffold00112 14194 1 T C scaffold17793 ScafM SNP 0029.scaffold00112 14222 1 C T scaffold17793 ScafM SNP 0029.scaffold00112 14234 1 G T scaffold17793 ScafM SNP 0029.scaffold00112 18117 1 A C scaffold15710 ScafM SNP 0029.scaffold00112 22465 2 AA GT scaffold2394 ScafM SNP 0029.scaffold00112 22537 1 T C scaffold2394 ScafM SNP 0029.scaffold00112 22539 1 A T scaffold2394 ScafM INDEL 0029.scaffold00112 22558 1 . T scaffold2394 ScafM SNP 0029.scaffold00112 22564 1 C T scaffold2394 ScafM SNP 0029.scaffold00112 22827 1 G C scaffold2394 ScafM SNP 0029.scaffold00112 22836 1 T G scaffold2394 ScafM SNP 0029.scaffold00112 22857 2 AT CC scaffold2394 ScafM SNP 0029.scaffold00112 22890 1 A C scaffold2394 ScafM SNP 0029.scaffold00112 22894 1 G T scaffold2394 ScafM SNP 0029.scaffold00112 22903 1 G A scaffold2394 ScafM SNP 0029.scaffold00112 22913 1 A G scaffold2394 ScafM SNP 0029.scaffold00112 22932 1 G A scaffold2394 ScafM SNP 0029.scaffold00112 22971 1 G T scaffold2394 ScafM SNP 0029.scaffold00112 23110 1 G C scaffold2394 ScafM SNP 0029.scaffold00112 25212 1 G A scaffold10159 ScafM SNP 0029.scaffold00112 25256 1 G A scaffold10159 ScafM SNP 0029.scaffold00112 25355 1 T A scaffold10159 ScafM SNP 0029.scaffold00112 26092 2 CA TT scaffold10159 ScafM SNP 0029.scaffold00112 26153 1 G T scaffold10159 ScafM SNP 0029.scaffold00112 26215 1 A T scaffold10159 ScafM SNP 0029.scaffold00112 26231 1 C T scaffold10159 ScafM SNP 0029.scaffold00112 27988 1 A G scaffold12371 ScafM INDEL 0029.scaffold00112 28084 5 ..... CATGA scaffold12371 ScafM SNP 0029.scaffold00112 28109 1 G A scaffold12371 ScafM SNP 0029.scaffold00112 28121 2 GA AT scaffold12371 ScafM SNP 0029.scaffold00112 28151 1 C T scaffold12371 ScafM SNP 0029.scaffold00112 28159 1 A G scaffold12371 ScafM SNP 0029.scaffold00112 28164 1 C T scaffold12371 ScafM SNP 0029.scaffold00112 28211 1 A G scaffold12371 ScafM SNP 0029.scaffold00112 28261 1 G A scaffold12371 ScafM SNP 0029.scaffold00112 28284 1 G T scaffold12371 ScafM SNP 0029.scaffold00112 28289 1 A C scaffold12371 ScafM SNP 0029.scaffold00112 28328 1 A T scaffold12371 ScafM SNP 0029.scaffold00112 28408 1 G T scaffold12371 ScafM SNP 0029.scaffold00112 28412 1 C G scaffold12371 ScafM SNP 0029.scaffold00112 28432 1 C G scaffold12371 ScafM SNP 0029.scaffold00112 40712 1 G A scaffold10159 ScafM SNP 0029.scaffold00112 53254 1 T G scaffold15932 ScafM SNP 0029.scaffold00112 53379 1 T C scaffold15932 ScafM SNP 0029.scaffold00112 53435 1 T C scaffold15932 Both SNP 0030.scaffold00117 20859 1 A C scaffold8726 ScafM INDEL 0030.scaffold00117 33075 1 . T scaffold19676 ScafM SNP 0030.scaffold00117 33087 1 G T scaffold19676 ScafM INDEL 0030.scaffold00117 33088 1 . G scaffold19676 Both INDEL 0030.scaffold00117 35550 1 T . scaffold19676 ScafM INDEL 0030.scaffold00117 38906 6 ...... CCCCCC scaffold19676 ScafM INDEL 0030.scaffold00117 40032 14 .............. CCTCAGACCCCCCC scaffold19676 ScafM INDEL 0030.scaffold00117 42279 20 .................... CCCCCCCCCCCCCCCCCCCC scaffold19676 Both SNP 0030.scaffold00117 47968 1 A C scaffold19676 ReadM SNP 0030.scaffold00117 53931 1 C T - Both SNP 0030.scaffold00117 56793 1 G C scaffold19676 ReadM SNP 0030.scaffold00117 82749 1 T C - ScafM SNP 0030.scaffold00117 84976 1 G A scaffold675 ScafM SNP 0030.scaffold00117 84985 1 G A scaffold675 ScafM SNP 0030.scaffold00117 84990 1 T C scaffold675 ScafM SNP 0030.scaffold00117 84992 1 C T scaffold675 ScafM SNP 0030.scaffold00117 85030 1 C G scaffold675 ScafM SNP 0030.scaffold00117 85192 1 G C scaffold675 ScafM SNP 0030.scaffold00117 85206 1 T C scaffold675 ScafM SNP 0030.scaffold00117 85275 1 C T scaffold675 ScafM SNP 0030.scaffold00117 85301 1 A T scaffold675 ScafM SNP 0030.scaffold00117 86396 1 T A scaffold675 ScafM SNP 0030.scaffold00117 86408 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86428 1 T A scaffold675 ScafM SNP 0030.scaffold00117 86438 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86461 1 T G scaffold675 ScafM SNP 0030.scaffold00117 86485 2 GA AC scaffold675 ScafM SNP 0030.scaffold00117 86507 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86509 1 T G scaffold675 ScafM SNP 0030.scaffold00117 86513 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86517 1 G A scaffold675 ScafM SNP 0030.scaffold00117 86526 1 G A scaffold675 ScafM SNP 0030.scaffold00117 86551 2 TC CT scaffold675 ScafM INDEL 0030.scaffold00117 86560 1 . G scaffold675 ScafM SNP 0030.scaffold00117 86571 1 G A scaffold675 ScafM INDEL 0030.scaffold00117 86583 2 TA .. scaffold675 ScafM INDEL 0030.scaffold00117 86597 4 TACA .... scaffold675 ScafM INDEL 0030.scaffold00117 86603 4 TGTT .... scaffold675 ScafM SNP 0030.scaffold00117 86612 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86616 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86625 1 G A scaffold675 ScafM SNP 0030.scaffold00117 86633 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86655 1 G T scaffold675 ScafM SNP 0030.scaffold00117 86662 1 G A scaffold675 ScafM INDEL 0030.scaffold00117 86664 3 AGA ... scaffold675 ScafM SNP 0030.scaffold00117 86676 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86688 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86704 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86717 1 A T scaffold675 ScafM SNP 0030.scaffold00117 86727 1 A C scaffold675 ScafM SNP 0030.scaffold00117 86741 1 G A scaffold675 ScafM SNP 0030.scaffold00117 86747 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86767 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86815 1 A T scaffold675 ScafM SNP 0030.scaffold00117 86821 1 G A scaffold675 ScafM INDEL 0030.scaffold00117 86823 1 C . scaffold675 Both SNP 0030.scaffold00117 86833 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86849 1 C G scaffold675 ScafM SNP 0030.scaffold00117 86857 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86896 1 A T scaffold675 ScafM SNP 0030.scaffold00117 86898 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86903 1 A G scaffold675 ScafM SNP 0030.scaffold00117 86924 1 G A scaffold675 ScafM SNP 0030.scaffold00117 86931 1 T C scaffold675 ScafM SNP 0030.scaffold00117 86941 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86966 2 GA AC scaffold675 ScafM SNP 0030.scaffold00117 86974 1 C T scaffold675 ScafM SNP 0030.scaffold00117 86980 1 G A scaffold675 ScafM SNP 0030.scaffold00117 87009 2 TA GT scaffold675 ScafM SNP 0030.scaffold00117 87012 1 C T scaffold675 ScafM SNP 0030.scaffold00117 87039 1 T A scaffold675 ScafM SNP 0030.scaffold00117 87041 1 G A scaffold675 ScafM SNP 0030.scaffold00117 87044 1 G A scaffold675 ScafM SNP 0030.scaffold00117 87080 1 G A scaffold675 ScafM SNP 0030.scaffold00117 87092 1 A T scaffold675 ScafM SNP 0030.scaffold00117 87140 1 G A scaffold675 ScafM SNP 0030.scaffold00117 87149 1 G T scaffold675 ScafM SNP 0030.scaffold00117 87154 1 C T scaffold675 ScafM SNP 0030.scaffold00117 87387 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87399 1 A T scaffold30716 ScafM SNP 0030.scaffold00117 87456 1 C G scaffold30716 ScafM SNP 0030.scaffold00117 87521 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87535 2 CT TC scaffold30716 ScafM SNP 0030.scaffold00117 87538 1 T C scaffold30716 ScafM SNP 0030.scaffold00117 87546 1 T C scaffold30716 ScafM SNP 0030.scaffold00117 87563 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87569 1 T C scaffold30716 ScafM SNP 0030.scaffold00117 87571 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87578 2 TT GC scaffold30716 ScafM INDEL 0030.scaffold00117 87590 1 T . scaffold30716 ScafM SNP 0030.scaffold00117 87593 1 A G scaffold30716 ScafM SNP 0030.scaffold00117 87602 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87604 1 T A scaffold30716 ScafM INDEL 0030.scaffold00117 87610 1 A . scaffold30716 ScafM SNP 0030.scaffold00117 87618 1 T A scaffold30716 ScafM INDEL 0030.scaffold00117 87624 2 CG .. scaffold30716 ScafM SNP 0030.scaffold00117 87628 1 C T scaffold30716 ScafM SNP 0030.scaffold00117 87648 2 GT TC scaffold30716 ScafM INDEL 0030.scaffold00117 87658 1 T . scaffold30716 ScafM INDEL 0030.scaffold00117 87741 1 A . scaffold30716 ScafM SNP 0030.scaffold00117 87747 1 A T scaffold30716 ScafM SNP 0030.scaffold00117 87777 1 G A scaffold30716 ScafM SNP 0030.scaffold00117 87795 1 T C scaffold30716 ScafM SNP 0030.scaffold00117 87821 1 A G scaffold30716 ScafM SNP 0030.scaffold00117 94623 1 A C scaffold14885 ScafM SNP 0030.scaffold00117 94697 1 C A scaffold14885 ScafM SNP 0030.scaffold00117 94937 1 C T scaffold14885 ReadM SNP 0030.scaffold00117 131025 1 T C - ReadM SNP 0030.scaffold00117 137013 1 T C - ScafM SNP 0030.scaffold00117 142027 1 A G scaffold5202 ScafM SNP 0030.scaffold00117 142052 1 A C scaffold5202 ScafM SNP 0030.scaffold00117 142074 1 C A scaffold5202 ScafM INDEL 0030.scaffold00117 177290 1 G . scaffold7673 ScafM INDEL 0030.scaffold00117 177348 1 T . scaffold7673 ScafM SNP 0030.scaffold00117 177442 2 CT AA scaffold7673 ScafM INDEL 0030.scaffold00117 177515 1 T . scaffold7673 ScafM INDEL 0030.scaffold00117 177524 1 A . scaffold7673 ScafM SNP 0030.scaffold00117 185263 1 C T scaffold25496 ScafM SNP 0030.scaffold00117 185278 1 A T scaffold25496 ScafM SNP 0030.scaffold00117 185307 1 C T scaffold25496 ScafM SNP 0030.scaffold00117 185384 1 A C scaffold25496 ScafM SNP 0030.scaffold00117 185412 1 C T scaffold25496 ScafM SNP 0030.scaffold00117 185414 1 T G scaffold25496 ScafM SNP 0030.scaffold00117 185472 1 C G scaffold25496 ScafM SNP 0030.scaffold00117 192442 1 A G scaffold201 ScafM SNP 0030.scaffold00117 192504 1 G A scaffold201 ScafM SNP 0030.scaffold00117 192524 1 T C scaffold201 ScafM INDEL 0030.scaffold00117 192548 3 TTA ... scaffold201 ScafM SNP 0030.scaffold00117 192561 1 A G scaffold201 ScafM SNP 0030.scaffold00117 192572 1 A G scaffold201 ScafM INDEL 0030.scaffold00117 192638 1 C . scaffold201 ScafM SNP 0030.scaffold00117 194346 1 A G scaffold5821 ScafM SNP 0030.scaffold00117 194372 1 A C scaffold5821 ScafM SNP 0030.scaffold00117 194393 1 A C scaffold5821 ScafM INDEL 0030.scaffold00117 194395 1 A . scaffold5821 ScafM SNP 0030.scaffold00117 194399 1 T G scaffold5821 ScafM INDEL 0030.scaffold00117 194407 1 T . scaffold5821 ScafM SNP 0030.scaffold00117 194417 1 A T scaffold5821 ScafM SNP 0030.scaffold00117 194446 1 T G scaffold5821 ScafM SNP 0030.scaffold00117 194460 1 T C scaffold5821 ScafM SNP 0030.scaffold00117 194499 1 G T scaffold5821 ScafM SNP 0030.scaffold00117 194510 1 G A scaffold5821 ScafM INDEL 0030.scaffold00117 194523 1 . A scaffold5821 ScafM SNP 0030.scaffold00117 194566 1 A C scaffold5821 ScafM SNP 0030.scaffold00117 194595 1 T G scaffold5821 ScafM INDEL 0030.scaffold00117 194652 3 ... ATA scaffold5821 ScafM SNP 0030.scaffold00117 194661 1 C A scaffold5821 ScafM SNP 0030.scaffold00117 194665 1 G A scaffold5821 ScafM SNP 0030.scaffold00117 194675 1 A C scaffold5821 ScafM SNP 0030.scaffold00117 194682 1 C T scaffold5821 ScafM SNP 0030.scaffold00117 194686 1 T G scaffold5821 ScafM INDEL 0030.scaffold00117 194687 1 . C scaffold5821 ScafM INDEL 0030.scaffold00117 194693 1 . A scaffold5821 ScafM SNP 0030.scaffold00117 194971 1 A G scaffold5821 ScafM SNP 0030.scaffold00117 194975 1 C A scaffold5821 ScafM INDEL 0030.scaffold00117 195004 1 A . scaffold5821 ScafM SNP 0030.scaffold00117 195028 1 G T scaffold5821 ScafM SNP 0030.scaffold00117 195063 1 G C scaffold5821 ScafM SNP 0030.scaffold00117 195073 1 C A scaffold5821 ScafM SNP 0030.scaffold00117 195091 1 G T scaffold5821 ScafM SNP 0030.scaffold00117 195098 2 CT TG scaffold5821 ScafM SNP 0030.scaffold00117 195127 1 A C scaffold5821 ScafM SNP 0030.scaffold00117 195134 1 G T scaffold5821 ScafM SNP 0030.scaffold00117 195184 1 C T scaffold5821 ScafM SNP 0030.scaffold00117 195197 1 A G scaffold5821 Both INDEL 0030.scaffold00117 208522 1 A . scaffold2252 Both SNP 0030.scaffold00117 221759 1 C T scaffold2252 ScafM INDEL 0030.scaffold00117 231210 4 .... TTTT scaffold2252 ScafM SNP 0030.scaffold00117 238485 1 A T scaffold2252 ScafM SNP 0030.scaffold00117 238490 1 T G scaffold2252 ScafM SNP 0030.scaffold00117 238641 1 C A scaffold2252 ScafM SNP 0030.scaffold00117 238678 1 T C scaffold2252 ScafM SNP 0030.scaffold00117 241255 1 T G scaffold2252 ScafM SNP 0030.scaffold00117 241261 1 A T scaffold2252 ScafM SNP 0030.scaffold00117 241280 1 G A scaffold2252 ScafM SNP 0030.scaffold00117 241495 1 T C scaffold2252 ScafM SNP 0030.scaffold00117 242007 1 A G scaffold7844 Both SNP 0030.scaffold00117 255977 1 G A scaffold7844 ScafM INDEL 0030.scaffold00117 261126 1 . A scaffold7844 ScafM INDEL 0030.scaffold00117 263555 1 . A scaffold7844 ScafM INDEL 0030.scaffold00117 265447 1 . C scaffold7844 ScafM SNP 0030.scaffold00117 273695 1 G C scaffold30403 ScafM SNP 0030.scaffold00117 274851 1 T C scaffold30403 ScafM INDEL 0030.scaffold00117 276548 7 TCCTGCC ...AAAA scaffold30403 ScafM SNP 0030.scaffold00117 276556 1 G A scaffold30403 ScafM INDEL 0030.scaffold00117 280188 1 . A scaffold30403 ScafM INDEL 0030.scaffold00117 295558 1 . C scaffold30403 ReadM INDEL 0030.scaffold00117 333233 1 . A - ScafM SNP 0030.scaffold00117 338498 1 T A scaffold95 ScafM SNP 0030.scaffold00117 338505 1 G A scaffold95 ReadM SNP 0030.scaffold00117 350845 1 C A - ScafM INDEL 0030.scaffold00117 351703 4 .... CGAT scaffold13543 ReadM SNP 0030.scaffold00117 352471 1 A G - ScafM INDEL 0030.scaffold00117 353939 1 . A scaffold13543 ScafM SNP 0030.scaffold00117 360775 1 C G scaffold6663 ScafM SNP 0030.scaffold00117 360798 1 G A scaffold6663 ScafM SNP 0030.scaffold00117 360827 1 A G scaffold6663 ScafM SNP 0030.scaffold00117 360848 1 A G scaffold6663 ScafM SNP 0030.scaffold00117 360859 1 T G scaffold6663 ScafM SNP 0030.scaffold00117 360866 1 G A scaffold6663 ScafM SNP 0030.scaffold00117 360868 1 C G scaffold6663 ScafM INDEL 0030.scaffold00117 367288 1 . G scaffold6181 ScafM INDEL 0030.scaffold00117 367290 1 . G scaffold6181 ScafM SNP 0030.scaffold00117 367295 1 T G scaffold6181 ScafM SNP 0030.scaffold00117 367318 1 C G scaffold6181 ScafM SNP 0030.scaffold00117 367321 1 C A scaffold6181 ScafM SNP 0030.scaffold00117 367328 2 CT AG scaffold6181 ScafM SNP 0030.scaffold00117 367345 1 T G scaffold6181 ScafM SNP 0030.scaffold00117 367350 1 G T scaffold6181 ScafM SNP 0030.scaffold00117 367354 1 A G scaffold6181 ScafM SNP 0030.scaffold00117 367369 1 C A scaffold6181 ScafM INDEL 0030.scaffold00117 367407 1 . G scaffold6181 ScafM SNP 0030.scaffold00117 367446 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367452 1 A T scaffold6181 ScafM SNP 0030.scaffold00117 367463 1 T A scaffold6181 ScafM SNP 0030.scaffold00117 367504 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367515 1 C T scaffold6181 ScafM SNP 0030.scaffold00117 367551 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367561 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367575 1 C A scaffold6181 ScafM SNP 0030.scaffold00117 367586 1 G T scaffold6181 ScafM SNP 0030.scaffold00117 367643 1 C T scaffold6181 ScafM SNP 0030.scaffold00117 367653 1 A G scaffold6181 ScafM SNP 0030.scaffold00117 367660 1 A C scaffold6181 ScafM SNP 0030.scaffold00117 367680 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367686 1 A T scaffold6181 ScafM SNP 0030.scaffold00117 367688 1 T A scaffold6181 ScafM SNP 0030.scaffold00117 367719 1 G A scaffold6181 ScafM SNP 0030.scaffold00117 367755 1 A G scaffold6181 ScafM SNP 0030.scaffold00117 367771 1 A G scaffold6181 ScafM SNP 0030.scaffold00117 367812 1 T G scaffold6181 ScafM SNP 0030.scaffold00117 367830 1 A G scaffold6181 ScafM SNP 0030.scaffold00117 367841 1 T C scaffold6181 ScafM SNP 0030.scaffold00117 367873 1 C T scaffold6181 ScafM INDEL 0030.scaffold00117 375513 4 .... TACA scaffold20268 ReadM SNP 0030.scaffold00117 394542 1 C T - ScafM SNP 0030.scaffold00117 417912 1 T C scaffold7739 ScafM INDEL 0030.scaffold00117 431914 9 ......... CCCCCCCCC scaffold28714 ScafM SNP 0030.scaffold00117 431918 1 A C scaffold28714 ScafM SNP 0030.scaffold00117 431921 1 C A scaffold28714 ReadM SNP 0030.scaffold00117 446603 1 A G - ReadM SNP 0030.scaffold00117 446977 1 C T - ReadM SNP 0030.scaffold00117 450881 1 T C - ScafM SNP 0030.scaffold00117 454772 1 G A scaffold2553 ScafM SNP 0030.scaffold00117 455528 1 G A scaffold2553 ScafM SNP 0030.scaffold00117 455790 1 A G scaffold2553 ScafM SNP 0030.scaffold00117 455985 1 G A scaffold2553 ScafM SNP 0030.scaffold00117 457672 1 T A scaffold36 ScafM SNP 0030.scaffold00117 457674 1 C A scaffold36 ScafM SNP 0030.scaffold00117 457690 1 C T scaffold36 ScafM SNP 0030.scaffold00117 457699 1 A G scaffold36 ScafM SNP 0030.scaffold00117 457701 1 G C scaffold36 ScafM SNP 0030.scaffold00117 457727 1 C A scaffold36 ScafM SNP 0030.scaffold00117 457751 1 G A scaffold36 ScafM SNP 0030.scaffold00117 457771 1 A T scaffold36 ScafM SNP 0030.scaffold00117 457780 1 C T scaffold36 ScafM SNP 0030.scaffold00117 457795 1 C A scaffold36 ScafM SNP 0030.scaffold00117 457802 1 G A scaffold36 ScafM SNP 0030.scaffold00117 457825 1 C T scaffold36 ScafM INDEL 0030.scaffold00117 457858 3 ATA ... scaffold36 ScafM SNP 0030.scaffold00117 457879 1 T C scaffold36 ScafM SNP 0030.scaffold00117 457891 1 G C scaffold36 ScafM SNP 0030.scaffold00117 457896 1 G A scaffold36 ScafM SNP 0030.scaffold00117 457928 1 T C scaffold36 ScafM SNP 0030.scaffold00117 457934 2 TG CA scaffold36 ScafM INDEL 0030.scaffold00117 457950 2 TC .. scaffold36 ScafM SNP 0030.scaffold00117 457953 1 C G scaffold36 ScafM SNP 0030.scaffold00117 458001 1 C A scaffold36 ScafM SNP 0030.scaffold00117 458011 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458014 1 G A scaffold36 ScafM SNP 0030.scaffold00117 458021 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458031 1 G A scaffold36 ScafM SNP 0030.scaffold00117 458043 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458048 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458060 1 G T scaffold36 ScafM SNP 0030.scaffold00117 458075 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458109 1 T C scaffold36 ScafM INDEL 0030.scaffold00117 458112 3 ... TAT scaffold36 ScafM SNP 0030.scaffold00117 458120 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458135 1 T C scaffold36 ScafM SNP 0030.scaffold00117 458199 1 C G scaffold36 ScafM SNP 0030.scaffold00117 458204 1 T C scaffold36 ScafM SNP 0030.scaffold00117 458207 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458210 1 C G scaffold36 ScafM INDEL 0030.scaffold00117 458215 6 ...... ACATTC scaffold36 ScafM SNP 0030.scaffold00117 458228 1 T A scaffold36 ScafM SNP 0030.scaffold00117 458241 1 A G scaffold36 ScafM INDEL 0030.scaffold00117 458261 1 . G scaffold36 ScafM SNP 0030.scaffold00117 458264 1 T A scaffold36 ScafM SNP 0030.scaffold00117 458274 1 C A scaffold36 ScafM SNP 0030.scaffold00117 458288 1 A G scaffold36 ScafM SNP 0030.scaffold00117 458290 1 G A scaffold36 ScafM SNP 0030.scaffold00117 458329 1 G A scaffold36 ScafM SNP 0030.scaffold00117 458342 1 G T scaffold36 ScafM SNP 0030.scaffold00117 458348 1 G T scaffold36 ScafM SNP 0030.scaffold00117 458359 2 GG CA scaffold36 ScafM SNP 0030.scaffold00117 458365 2 TG AA scaffold36 ScafM SNP 0030.scaffold00117 458370 1 T C scaffold36 ScafM SNP 0030.scaffold00117 458386 1 C T scaffold36 ScafM SNP 0030.scaffold00117 458450 2 AT CC scaffold36 ScafM INDEL 0030.scaffold00117 458457 5 ..... TATTA scaffold36 ScafM SNP 0030.scaffold00117 458471 1 T C scaffold36 ScafM SNP 0030.scaffold00117 458479 4 AAAG TTTT scaffold36 ScafM SNP 0030.scaffold00117 459410 1 T A scaffold19347 ScafM INDEL 0030.scaffold00117 467133 1 . T scaffold19347 ReadM INDEL 0030.scaffold00117 468183 3 ... AAA - ScafM INDEL 0030.scaffold00117 468201 17 AGTAGAGGAAAGGACCT ................. scaffold19347 ScafM INDEL 0030.scaffold00117 468222 5 CATAT ..... scaffold19347 ScafM INDEL 0030.scaffold00117 474678 1 . C scaffold19347 ScafM INDEL 0030.scaffold00117 474698 1 A . scaffold19347 ScafM INDEL 0030.scaffold00117 474705 1 T . scaffold19347 ScafM INDEL 0030.scaffold00117 474711 1 G . scaffold19347 ScafM INDEL 0030.scaffold00117 474716 1 A . scaffold19347 ScafM INDEL 0030.scaffold00117 474723 1 A . scaffold19347 ScafM INDEL 0030.scaffold00117 475213 17 ................. GAGCAAGAAGAAGTTTA scaffold19347 ScafM SNP 0030.scaffold00117 480284 1 G C scaffold11375 ScafM SNP 0030.scaffold00117 480326 1 T A scaffold11375 ScafM SNP 0030.scaffold00117 481443 1 A G scaffold19347 ScafM SNP 0030.scaffold00117 481471 1 G A scaffold19347 ScafM INDEL 0030.scaffold00117 484674 1 . A scaffold37154 ScafM SNP 0030.scaffold00117 486606 1 G T scaffold19347 ReadM INDEL 0030.scaffold00117 511999 1 A . - ReadM SNP 0030.scaffold00117 514279 1 G C - ScafM INDEL 0030.scaffold00117 537659 23 ....................... CAAAAAAAAAAAAAAAAAAAAAA scaffold818 ScafM SNP 0030.scaffold00117 537661 1 C A scaffold818 ScafM SNP 0030.scaffold00117 545380 1 A C scaffold818 ScafM INDEL 0030.scaffold00117 547337 60 CCTAATCTCTAATTGAATGACAAAAGTAATAACGATGCCATACGTGTTAATCCTGATCGA ............................................................ scaffold818 ScafM INDEL 0030.scaffold00117 547418 3 TTC ... scaffold818 ScafM SNP 0030.scaffold00117 547443 1 G T scaffold818 ScafM INDEL 0030.scaffold00117 547445 9 ......... TCTTTTTAT scaffold818 ScafM SNP 0030.scaffold00117 547469 1 G A scaffold818 ScafM INDEL 0030.scaffold00117 547501 3 AAT ... scaffold818 ScafM SNP 0030.scaffold00117 547544 1 C T scaffold818 ScafM SNP 0030.scaffold00117 547564 1 G C scaffold818 ScafM SNP 0030.scaffold00117 547569 1 C T scaffold818 ScafM SNP 0030.scaffold00117 547582 1 A G scaffold818 ScafM SNP 0030.scaffold00117 547585 1 A T scaffold818 ScafM SNP 0030.scaffold00117 556858 1 G C scaffold33754 ScafM SNP 0030.scaffold00117 561362 1 T A scaffold18742 ScafM INDEL 0030.scaffold00117 561472 2 .. GA scaffold18742 ScafM SNP 0030.scaffold00117 561516 1 T C scaffold18742 ScafM SNP 0030.scaffold00117 561596 1 C T scaffold18742 ScafM SNP 0030.scaffold00117 570598 1 C T scaffold2263 ScafM SNP 0030.scaffold00117 570700 1 C T scaffold2263 ScafM SNP 0030.scaffold00117 570920 1 C T scaffold2263 ScafM SNP 0030.scaffold00117 570997 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571005 2 GC TT scaffold13489 ScafM SNP 0030.scaffold00117 571019 2 GC AA scaffold13489 ScafM SNP 0030.scaffold00117 571057 2 CA TT scaffold13489 ScafM SNP 0030.scaffold00117 571060 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571069 2 CG AT scaffold13489 ScafM SNP 0030.scaffold00117 571092 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571094 1 T G scaffold13489 ScafM SNP 0030.scaffold00117 571103 2 AG GT scaffold13489 ScafM INDEL 0030.scaffold00117 571122 1 G . scaffold13489 ScafM SNP 0030.scaffold00117 571154 1 T G scaffold13489 ScafM SNP 0030.scaffold00117 571170 1 A C scaffold13489 ScafM INDEL 0030.scaffold00117 571173 5 TGGAG ..... scaffold13489 ScafM SNP 0030.scaffold00117 571203 1 G T scaffold13489 ScafM INDEL 0030.scaffold00117 571207 1 C . scaffold13489 ScafM SNP 0030.scaffold00117 571219 2 CT AC scaffold13489 ScafM INDEL 0030.scaffold00117 571255 5 ..... TCATC scaffold13489 ScafM SNP 0030.scaffold00117 571288 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571304 1 C G scaffold13489 ScafM SNP 0030.scaffold00117 571306 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571311 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571313 1 G C scaffold13489 ScafM INDEL 0030.scaffold00117 571314 2 .. TA scaffold13489 ScafM SNP 0030.scaffold00117 571315 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571334 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571339 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571359 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571361 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 571369 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571379 1 T C scaffold13489 ScafM INDEL 0030.scaffold00117 571413 2 .. TA scaffold13489 ScafM SNP 0030.scaffold00117 571417 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571422 2 CC TG scaffold13489 ScafM SNP 0030.scaffold00117 571451 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571454 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571495 1 G C scaffold13489 ScafM SNP 0030.scaffold00117 571506 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 571521 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571527 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571529 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571532 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571535 2 AC TG scaffold13489 ScafM SNP 0030.scaffold00117 571538 3 AGG GAC scaffold13489 ScafM SNP 0030.scaffold00117 571551 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571572 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571577 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571580 1 G T scaffold13489 ScafM INDEL 0030.scaffold00117 571608 1 . A scaffold13489 ScafM SNP 0030.scaffold00117 571610 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571619 1 T A scaffold13489 ScafM SNP 0030.scaffold00117 571643 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571665 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571683 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 571694 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571699 3 TCC CTT scaffold13489 ScafM SNP 0030.scaffold00117 571710 1 T A scaffold13489 ScafM INDEL 0030.scaffold00117 571730 10 CAAAAGCAGA .......... scaffold13489 ScafM INDEL 0030.scaffold00117 571742 3 CAG ... scaffold13489 ScafM SNP 0030.scaffold00117 571746 1 G C scaffold13489 ScafM SNP 0030.scaffold00117 571749 1 A C scaffold13489 ScafM SNP 0030.scaffold00117 571764 1 G A scaffold13489 ScafM INDEL 0030.scaffold00117 571789 3 CAC ... scaffold13489 ScafM SNP 0030.scaffold00117 571794 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571796 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 571839 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571875 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 571880 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 571883 2 CC TA scaffold13489 ScafM SNP 0030.scaffold00117 571903 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 571905 1 T A scaffold13489 ScafM SNP 0030.scaffold00117 571919 1 G C scaffold13489 ScafM SNP 0030.scaffold00117 571932 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 571949 2 AC GT scaffold13489 ScafM SNP 0030.scaffold00117 571986 1 A C scaffold13489 ScafM SNP 0030.scaffold00117 571996 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572027 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 572032 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572037 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 572040 1 G C scaffold13489 ScafM SNP 0030.scaffold00117 572044 1 T G scaffold13489 ScafM SNP 0030.scaffold00117 572057 1 T A scaffold13489 ScafM SNP 0030.scaffold00117 572059 1 T A scaffold13489 ScafM SNP 0030.scaffold00117 572069 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 572076 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572081 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 572083 1 A C scaffold13489 ScafM INDEL 0030.scaffold00117 572091 2 TT .C scaffold13489 ScafM INDEL 0030.scaffold00117 572100 3 AGG ... scaffold13489 ScafM SNP 0030.scaffold00117 572107 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572109 1 A T scaffold13489 ScafM SNP 0030.scaffold00117 572115 1 A C scaffold13489 ScafM SNP 0030.scaffold00117 572125 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572154 2 CT TC scaffold13489 ScafM SNP 0030.scaffold00117 572161 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572163 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572183 2 CG TA scaffold13489 ScafM SNP 0030.scaffold00117 572205 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572207 1 T A scaffold13489 ScafM SNP 0030.scaffold00117 572216 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572225 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572236 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572238 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572266 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572284 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572309 1 A C scaffold13489 ScafM SNP 0030.scaffold00117 572337 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572368 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572396 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572400 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572407 1 C T scaffold13489 ScafM INDEL 0030.scaffold00117 572415 4 AACT .... scaffold13489 ScafM SNP 0030.scaffold00117 572420 1 G A scaffold13489 ScafM SNP 0030.scaffold00117 572438 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572441 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572443 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572467 1 C A scaffold13489 ScafM SNP 0030.scaffold00117 572469 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572474 1 C G scaffold13489 ScafM SNP 0030.scaffold00117 572508 1 C G scaffold13489 ScafM SNP 0030.scaffold00117 572518 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572527 1 G T scaffold13489 ScafM SNP 0030.scaffold00117 572534 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572553 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572568 2 CG AC scaffold13489 ScafM INDEL 0030.scaffold00117 572576 2 TA .. scaffold13489 ScafM SNP 0030.scaffold00117 572585 1 A G scaffold13489 ScafM INDEL 0030.scaffold00117 572606 3 ... TAT scaffold13489 ScafM SNP 0030.scaffold00117 572625 1 G C scaffold13489 ScafM SNP 0030.scaffold00117 572642 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572646 1 C T scaffold13489 ScafM SNP 0030.scaffold00117 572652 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572654 1 A G scaffold13489 ScafM SNP 0030.scaffold00117 572665 1 A C scaffold13489 ScafM SNP 0030.scaffold00117 572673 1 T C scaffold13489 ScafM SNP 0030.scaffold00117 572708 1 C A scaffold13489 ScafM INDEL 0030.scaffold00117 572710 1 . G scaffold13489 ScafM SNP 0030.scaffold00117 572713 1 G A scaffold13489 ScafM INDEL 0030.scaffold00117 572718 2 AC .. scaffold13489 ScafM INDEL 0030.scaffold00117 572724 3 CAG ... scaffold13489 ScafM SNP 0030.scaffold00117 572748 1 T C scaffold13489 ScafM INDEL 0030.scaffold00117 578687 1 A . scaffold4013 ScafM SNP 0030.scaffold00117 589846 1 T G scaffold4013 ScafM INDEL 0030.scaffold00117 593032 10 ATTTGTTTTC .......... scaffold4013 ScafM SNP 0030.scaffold00117 611561 1 A G scaffold15285 ScafM SNP 0030.scaffold00117 611620 1 C A scaffold15285 ScafM SNP 0030.scaffold00117 611628 1 G A scaffold15285 ScafM SNP 0030.scaffold00117 611640 1 C G scaffold15285 ScafM SNP 0030.scaffold00117 611646 1 T C scaffold15285 ScafM SNP 0030.scaffold00117 611904 1 A G scaffold15285 ScafM SNP 0030.scaffold00117 611951 1 A G scaffold15285 ScafM SNP 0030.scaffold00117 611985 2 CA TG scaffold15285 ScafM SNP 0030.scaffold00117 612026 1 G A scaffold15285 ScafM SNP 0030.scaffold00117 612051 2 CC TT scaffold15285 ScafM INDEL 0030.scaffold00117 617533 1 . A scaffold11417 ScafM INDEL 0030.scaffold00117 619945 1 . G scaffold11417 ScafM SNP 0030.scaffold00117 620183 1 A G scaffold11417 ScafM SNP 0030.scaffold00117 623762 1 C T scaffold14071 ScafM SNP 0030.scaffold00117 623769 1 C G scaffold14071 ScafM INDEL 0030.scaffold00117 623771 1 . C scaffold14071 ScafM INDEL 0030.scaffold00117 623838 1 . T scaffold14071 ScafM SNP 0030.scaffold00117 623847 1 A G scaffold14071 ScafM SNP 0030.scaffold00117 623850 1 G A scaffold14071 ScafM SNP 0030.scaffold00117 623855 1 G A scaffold14071 ScafM SNP 0030.scaffold00117 623887 1 A G scaffold14071 ScafM SNP 0030.scaffold00117 623961 1 C G scaffold14071 ScafM SNP 0030.scaffold00117 623964 1 G T scaffold14071 ScafM SNP 0030.scaffold00117 624002 1 A C scaffold14071 ScafM SNP 0030.scaffold00117 624005 1 A G scaffold14071 ScafM INDEL 0030.scaffold00117 624028 2 TA .. scaffold14071 ScafM SNP 0030.scaffold00117 624078 1 A C scaffold14071 ScafM SNP 0030.scaffold00117 624085 1 C T scaffold14071 ScafM SNP 0030.scaffold00117 624100 1 T C scaffold14071 ScafM SNP 0030.scaffold00117 624102 1 G T scaffold14071 ScafM SNP 0030.scaffold00117 624112 1 T C scaffold14071 ScafM SNP 0030.scaffold00117 624126 1 C T scaffold14071 ScafM INDEL 0030.scaffold00117 629854 1 . A scaffold11417 ReadM SNP 0030.scaffold00117 635783 1 C A - ReadM SNP 0030.scaffold00117 644308 1 G T - ScafM SNP 0030.scaffold00117 662978 2 GG AA scaffold7764 ScafM SNP 0030.scaffold00117 662993 1 C T scaffold7764 ScafM SNP 0030.scaffold00117 663006 1 A C scaffold7764 ScafM INDEL 0030.scaffold00117 663071 21 ..................... GGGGCGGCGTGCATAAATAAA scaffold7764 ScafM SNP 0030.scaffold00117 663452 1 T G scaffold7764 ScafM SNP 0030.scaffold00117 663459 1 G T scaffold7764 ScafM INDEL 0030.scaffold00117 663515 24 ........................ ATTTGCACCTATTCTTAGCACTAA scaffold7764 ScafM SNP 0030.scaffold00117 668680 1 A C scaffold7764 ScafM SNP 0030.scaffold00117 668826 1 C T scaffold7764 ScafM SNP 0030.scaffold00117 669139 1 C T scaffold7764 ScafM SNP 0030.scaffold00117 669167 1 A G scaffold7764 ScafM SNP 0030.scaffold00117 669173 1 T A scaffold7764 ScafM INDEL 0030.scaffold00117 669183 2 .. AT scaffold7764 ScafM SNP 0030.scaffold00117 669262 1 T C scaffold7764 ScafM SNP 0030.scaffold00117 669475 1 A G scaffold7764 ScafM SNP 0030.scaffold00117 669695 1 T C scaffold7764 ScafM SNP 0030.scaffold00117 669791 1 A G scaffold7764 ScafM INDEL 0030.scaffold00117 669841 15 TTCTACAAACACAAT ............... scaffold7764 ScafM SNP 0030.scaffold00117 669879 1 A G scaffold7764 ScafM SNP 0030.scaffold00117 669923 1 C T scaffold7764 ScafM SNP 0030.scaffold00117 670016 1 T A scaffold7764 ScafM SNP 0030.scaffold00117 670079 1 G A scaffold7764 ScafM SNP 0030.scaffold00117 670191 1 C G scaffold7764 ScafM SNP 0030.scaffold00117 670196 1 G A scaffold7764 ScafM INDEL 0030.scaffold00117 670253 2 AA .. scaffold7764 ScafM INDEL 0030.scaffold00117 670442 1 T . scaffold7764 ScafM INDEL 0030.scaffold00117 672041 1 A . scaffold7764 ReadM SNP 0030.scaffold00117 679715 1 C T - ScafM SNP 0030.scaffold00117 679942 1 C T scaffold7764 ScafM INDEL 0030.scaffold00117 690632 1 . T scaffold16263 Both INDEL 0030.scaffold00117 721000 1 A . scaffold9748 ScafM INDEL 0030.scaffold00117 721345 1 . A scaffold9748 ScafM SNP 0030.scaffold00117 721347 1 T A scaffold9748 ScafM INDEL 0030.scaffold00117 723651 1 . C scaffold9748 ScafM SNP 0030.scaffold00117 725264 1 T A scaffold9748 ScafM INDEL 0030.scaffold00117 725267 1 A . scaffold9748 ScafM INDEL 0030.scaffold00117 725270 1 T . scaffold9748 ScafM SNP 0030.scaffold00117 725272 2 TG GC scaffold9748 ScafM SNP 0030.scaffold00117 725276 4 TGTA CCGC scaffold9748 ScafM SNP 0030.scaffold00117 725282 1 G A scaffold9748 ScafM INDEL 0030.scaffold00117 725283 2 .G TT scaffold9748 ScafM INDEL 0030.scaffold00117 725501 2 .. TT scaffold9748 ScafM SNP 0030.scaffold00117 731995 1 T C scaffold9748 ScafM INDEL 0030.scaffold00117 734170 1 . T scaffold9748 Both SNP 0030.scaffold00117 743299 1 C T scaffold9748 ScafM INDEL 0030.scaffold00117 758318 1 . A scaffold3890 ScafM INDEL 0030.scaffold00117 763988 1 . T scaffold3890 ScafM SNP 0030.scaffold00117 769348 1 T C scaffold3890 Both SNP 0030.scaffold00117 770243 1 G A scaffold3890 Both SNP 0030.scaffold00117 774088 1 A G scaffold3890 ScafM SNP 0030.scaffold00117 783661 1 G A scaffold3890 ScafM SNP 0030.scaffold00117 797849 1 C T scaffold3890 ScafM INDEL 0030.scaffold00117 797852 46 .............................................. TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold3890 ScafM INDEL 0030.scaffold00117 797927 1 . T scaffold3890 ReadM SNP 0030.scaffold00117 800152 1 C A - ReadM SNP 0030.scaffold00117 811809 1 G A - ScafM INDEL 0030.scaffold00117 850297 4 AGTT .... scaffold10910 ScafM SNP 0030.scaffold00117 862140 1 A C scaffold10910 ScafM SNP 0030.scaffold00117 862155 1 T C scaffold10910 ScafM SNP 0030.scaffold00117 862214 1 A T scaffold10910 ScafM SNP 0030.scaffold00117 862268 1 T C scaffold10910 ScafM SNP 0030.scaffold00117 862288 1 G A scaffold10910 ScafM INDEL 0030.scaffold00117 862297 1 A . scaffold10910 ScafM SNP 0030.scaffold00117 862329 1 T C scaffold10910 ScafM SNP 0030.scaffold00117 862393 1 G C scaffold10910 ScafM SNP 0030.scaffold00117 863151 1 T C scaffold10910 ScafM INDEL 0030.scaffold00117 872520 3 ... TAT scaffold10910 ScafM SNP 0030.scaffold00117 874110 1 T A scaffold10910 ScafM SNP 0030.scaffold00117 892057 1 T C scaffold6868 ScafM SNP 0030.scaffold00117 892136 1 T G scaffold6868 ScafM SNP 0030.scaffold00117 892627 1 A C scaffold6868 ScafM SNP 0030.scaffold00117 896459 1 C A scaffold7951 ScafM SNP 0030.scaffold00117 896466 1 C A scaffold7951 ScafM SNP 0030.scaffold00117 896471 1 G A scaffold7951 ScafM INDEL 0030.scaffold00117 896496 7 TGATGAG ....... scaffold7951 ScafM INDEL 0030.scaffold00117 896526 3 ... TGT scaffold7951 ScafM INDEL 0030.scaffold00117 896528 2 .. TT scaffold7951 ScafM INDEL 0030.scaffold00117 896531 1 . G scaffold7951 ScafM SNP 0030.scaffold00117 896534 1 C T scaffold7951 ScafM SNP 0030.scaffold00117 900771 1 T C scaffold6868 ReadM SNP 0030.scaffold00117 904915 1 C A - ScafM INDEL 0030.scaffold00117 942754 1 . A scaffold29808 ReadM SNP 0030.scaffold00117 951207 1 G A - ScafM INDEL 0030.scaffold00117 951668 1 C . scaffold29808 ScafM SNP 0030.scaffold00117 955839 1 G A scaffold2173 ScafM SNP 0030.scaffold00117 955920 1 G A scaffold2173 ScafM SNP 0030.scaffold00117 956151 1 T G scaffold2173 ScafM SNP 0030.scaffold00117 958076 1 T C scaffold2173 ScafM SNP 0030.scaffold00117 958127 1 T A scaffold2173 ScafM INDEL 0030.scaffold00117 958195 10 TTGTTAACGT .......... scaffold2173 ScafM INDEL 0030.scaffold00117 958208 3 GTT ... scaffold2173 ScafM INDEL 0030.scaffold00117 958213 2 CA .. scaffold2173 ScafM INDEL 0030.scaffold00117 958218 2 TT .. scaffold2173 ScafM SNP 0030.scaffold00117 958236 1 C A scaffold2173 ScafM SNP 0030.scaffold00117 958324 1 T A scaffold2173 ScafM SNP 0030.scaffold00117 958371 1 T C scaffold2173 ScafM SNP 0030.scaffold00117 958394 1 G A scaffold2173 ScafM INDEL 0030.scaffold00117 960376 1 . G scaffold2173 ReadM SNP 0030.scaffold00117 971674 1 C T - ScafM SNP 0030.scaffold00117 987633 2 CT TC scaffold2173 ScafM SNP 0030.scaffold00117 987655 1 A G scaffold2173 ScafM SNP 0030.scaffold00117 987676 1 A G scaffold2173 ScafM SNP 0030.scaffold00117 987681 1 G T scaffold2173 ScafM SNP 0030.scaffold00117 987726 1 A G scaffold2173 ScafM SNP 0030.scaffold00117 987732 1 C T scaffold2173 ReadM INDEL 0030.scaffold00117 993091 1 . A - ReadM INDEL 0030.scaffold00117 993980 2 .. TA - ScafM INDEL 0030.scaffold00117 993981 2 .. TA scaffold2173 ScafM INDEL 0030.scaffold00117 998720 5 AAAAC ..... scaffold15046 ScafM INDEL 0030.scaffold00117 998726 2 GA .. scaffold15046 ScafM SNP 0030.scaffold00117 998732 1 T C scaffold15046 ScafM INDEL 0030.scaffold00117 998735 1 . T scaffold15046 ScafM SNP 0030.scaffold00117 998737 1 C A scaffold15046 ScafM SNP 0030.scaffold00117 998779 1 C T scaffold15046 ScafM SNP 0030.scaffold00117 998798 1 C A scaffold15046 ScafM INDEL 0030.scaffold00117 998811 3 .AC TTT scaffold15046 ScafM INDEL 0030.scaffold00117 1003174 6 ...... GCCTAT scaffold2173 ScafM SNP 0030.scaffold00117 1003198 1 A G scaffold2173 ScafM SNP 0030.scaffold00117 1003203 1 A C scaffold2173 ScafM INDEL 0030.scaffold00117 1003223 7 CGAACAT ....... scaffold2173 ScafM INDEL 0030.scaffold00117 1003284 1 . G scaffold2173 ScafM INDEL 0030.scaffold00117 1003302 1 G . scaffold2173 ScafM SNP 0030.scaffold00117 1003311 1 A T scaffold2173 ScafM SNP 0030.scaffold00117 1003315 1 T C scaffold2173 ScafM SNP 0030.scaffold00117 1003347 1 T C scaffold2173 ScafM INDEL 0030.scaffold00117 1003864 1 . G scaffold2173 ScafM SNP 0030.scaffold00117 1003893 1 A G scaffold2173 ScafM SNP 0030.scaffold00117 1003945 1 A C scaffold2173 ScafM SNP 0030.scaffold00117 1004014 1 T C scaffold2173 ScafM INDEL 0030.scaffold00117 1018433 1 G . scaffold2173 ScafM INDEL 0030.scaffold00117 1020715 23 ....................... GGGGGTTTTTTGGGGGGGGGGGG scaffold2173 ScafM INDEL 0030.scaffold00117 1028626 1 . T scaffold2173 ReadM SNP 0030.scaffold00117 1042782 1 A G - ReadM INDEL 0030.scaffold00117 1067028 1 . T - ScafM INDEL 0030.scaffold00117 1073195 16 ................ GGGGGGGGGGGGGGGG scaffold22773 ScafM SNP 0030.scaffold00117 1073267 1 A G scaffold22773 ScafM SNP 0030.scaffold00117 1077906 1 A C scaffold22773 ScafM INDEL 0030.scaffold00117 1081449 1 . T scaffold22773 ScafM SNP 0030.scaffold00117 1095691 1 T G scaffold23092 ScafM SNP 0030.scaffold00117 1096201 1 G A scaffold7753 ScafM INDEL 0030.scaffold00117 1098356 4 ...C TAGT scaffold15722 ScafM SNP 0030.scaffold00117 1101173 1 C T scaffold15722 ScafM SNP 0030.scaffold00117 1106145 1 C T scaffold372 ScafM SNP 0030.scaffold00117 1106153 1 T C scaffold372 ScafM SNP 0030.scaffold00117 1106158 1 T G scaffold372 ScafM SNP 0030.scaffold00117 1106241 1 C T scaffold372 ScafM SNP 0030.scaffold00117 1106303 1 A C scaffold372 ScafM SNP 0030.scaffold00117 1119903 1 G A scaffold22064 ScafM SNP 0030.scaffold00117 1119918 1 T A scaffold22064 ScafM INDEL 0030.scaffold00117 1120025 8 AACCAATA ........ scaffold22064 ScafM INDEL 0030.scaffold00117 1120040 26 CCATCATAATACACAAAACCATCTAA .......................... scaffold22064 ScafM INDEL 0030.scaffold00117 1120067 1 A . scaffold22064 ScafM INDEL 0030.scaffold00117 1120070 6 AATATA ...... scaffold22064 ScafM SNP 0030.scaffold00117 1120077 1 T C scaffold22064 ScafM INDEL 0030.scaffold00117 1120083 6 CAATCA ...... scaffold22064 ScafM INDEL 0030.scaffold00117 1120090 5 AAATT ....C scaffold22064 ScafM INDEL 0030.scaffold00117 1120097 1 A . scaffold22064 ScafM INDEL 0030.scaffold00117 1120099 2 AT .. scaffold22064 ScafM SNP 0030.scaffold00117 1120125 1 A G scaffold22064 ScafM SNP 0030.scaffold00117 1120208 1 T C scaffold22064 ScafM SNP 0030.scaffold00117 1120239 1 A G scaffold22064 ScafM SNP 0030.scaffold00117 1149225 1 A C scaffold9480 ScafM INDEL 0030.scaffold00117 1183501 1 C . scaffold285 ScafM SNP 0030.scaffold00117 1207644 1 A T scaffold285 ReadM SNP 0031.scaffold00123 760 1 G A - ScafM SNP 0031.scaffold00123 33763 1 T G scaffold14727 ReadM SNP 0031.scaffold00123 35723 1 A G - ScafM SNP 0031.scaffold00123 48633 1 A G scaffold14727 ScafM SNP 0031.scaffold00123 48665 1 G A scaffold14727 ScafM SNP 0031.scaffold00123 68960 1 C T scaffold11762 ScafM SNP 0031.scaffold00123 68979 1 G T scaffold11762 ScafM SNP 0031.scaffold00123 68981 1 G T scaffold11762 ScafM SNP 0031.scaffold00123 69000 1 A G scaffold11762 ScafM SNP 0031.scaffold00123 69035 1 C T scaffold11762 ScafM SNP 0031.scaffold00123 69044 1 A G scaffold11762 ScafM SNP 0031.scaffold00123 69061 1 G A scaffold11762 ScafM SNP 0031.scaffold00123 69065 1 C T scaffold11762 ScafM SNP 0031.scaffold00123 69116 1 G A scaffold11762 ScafM SNP 0031.scaffold00123 69130 1 A G scaffold11762 ScafM SNP 0031.scaffold00123 69132 1 G A scaffold11762 ScafM SNP 0031.scaffold00123 69140 1 T A scaffold11762 ReadM SNP 0031.scaffold00123 85071 1 G A - ReadM SNP 0031.scaffold00123 91381 1 G A - ScafM INDEL 0031.scaffold00123 116411 52 .................................................... AGTGGTATAAAAACAGTAAGTTAATGAGTAGATCTGGAACCACATTATTAAT scaffold6527 ScafM INDEL 0031.scaffold00123 129839 1 . A scaffold5796 ScafM INDEL 0031.scaffold00123 133916 25 ......................... TTTTTTTTTTTTTTTTTTTTTTTTT scaffold5796 ScafM SNP 0031.scaffold00123 134310 1 T C scaffold5796 Both INDEL 0031.scaffold00123 150711 1 . A scaffold5796 ScafM SNP 0031.scaffold00123 152563 1 A T scaffold9391 ScafM INDEL 0031.scaffold00123 152575 1 . T scaffold9391 ScafM SNP 0031.scaffold00123 154530 1 G A scaffold5796 ScafM SNP 0031.scaffold00123 155025 1 C T scaffold5796 ScafM SNP 0031.scaffold00123 155030 1 C T scaffold5796 ScafM SNP 0031.scaffold00123 155041 1 A G scaffold5796 ScafM SNP 0031.scaffold00123 155053 1 A G scaffold5796 ScafM INDEL 0031.scaffold00123 155125 5 ATTAA ..... scaffold5796 ScafM SNP 0031.scaffold00123 155132 1 T C scaffold5796 ScafM SNP 0031.scaffold00123 155155 1 A T scaffold5796 ScafM SNP 0031.scaffold00123 155166 1 C T scaffold5796 ScafM SNP 0031.scaffold00123 155173 1 C T scaffold5796 ScafM INDEL 0031.scaffold00123 155565 8 ........ ACTGCTAG scaffold5796 ScafM SNP 0031.scaffold00123 155579 1 T G scaffold5796 ScafM SNP 0031.scaffold00123 155602 1 G T scaffold5796 ScafM SNP 0031.scaffold00123 155605 1 T C scaffold5796 ScafM INDEL 0031.scaffold00123 158251 61 ............................................................. ACTGTTACATACGGTGTAAAGTTTCTTTGTGGATTACACTTTGAAGTTATTCTGACATGTT scaffold5796 ScafM SNP 0031.scaffold00123 158310 1 A T scaffold5796 Both SNP 0031.scaffold00123 158880 1 A C scaffold5796 Both SNP 0031.scaffold00123 159321 1 T G scaffold5796 Both SNP 0031.scaffold00123 160090 1 T G scaffold5796 ScafM SNP 0031.scaffold00123 160208 1 C T scaffold5796 Both SNP 0031.scaffold00123 160248 1 C T scaffold5796 Both SNP 0031.scaffold00123 160411 2 AA TT scaffold5796 Both SNP 0031.scaffold00123 161246 1 A C scaffold5796 Both INDEL 0031.scaffold00123 161298 1 . T scaffold5796 ScafM INDEL 0031.scaffold00123 161367 13 TTTTTGTGATATA ............. scaffold5796 Both SNP 0031.scaffold00123 161643 1 A C scaffold5796 ScafM SNP 0031.scaffold00123 162541 1 G A scaffold5796 Both SNP 0031.scaffold00123 164258 1 T A scaffold5796 ScafM INDEL 0031.scaffold00123 164322 1 . T scaffold5796 ScafM INDEL 0031.scaffold00123 164567 1 A . scaffold5581 ScafM INDEL 0031.scaffold00123 164917 1 . C scaffold5581 ScafM SNP 0031.scaffold00123 164919 1 G C scaffold5581 ScafM SNP 0031.scaffold00123 165032 2 AA GC scaffold5581 ScafM SNP 0031.scaffold00123 165049 1 C G scaffold5581 ScafM SNP 0031.scaffold00123 165055 1 T G scaffold5581 ScafM INDEL 0031.scaffold00123 165102 1 T . scaffold5581 ScafM SNP 0031.scaffold00123 165112 1 G T scaffold5581 ScafM SNP 0031.scaffold00123 165138 1 C A scaffold5581 ScafM SNP 0031.scaffold00123 165158 1 C G scaffold5581 ScafM SNP 0031.scaffold00123 165176 1 G C scaffold5581 Both SNP 0031.scaffold00123 165224 1 C A scaffold5581 Both SNP 0031.scaffold00123 165394 1 T C scaffold5581 ScafM SNP 0031.scaffold00123 165505 1 G A scaffold5581 ScafM SNP 0031.scaffold00123 165524 1 C T scaffold5581 ScafM SNP 0031.scaffold00123 165533 1 G A scaffold5581 ScafM SNP 0031.scaffold00123 165569 1 A G scaffold5581 Both SNP 0031.scaffold00123 165617 1 G A scaffold5581 ScafM INDEL 0031.scaffold00123 165715 1 . A scaffold5581 ScafM SNP 0031.scaffold00123 165831 1 T C scaffold5581 ScafM SNP 0031.scaffold00123 165833 1 C A scaffold5581 ScafM SNP 0031.scaffold00123 165897 1 T G scaffold5581 ScafM SNP 0031.scaffold00123 165965 1 A G scaffold5581 ScafM INDEL 0031.scaffold00123 180697 8 ........ GGGGGGGG scaffold5796 ScafM SNP 0031.scaffold00123 189405 1 T A scaffold6900 ScafM SNP 0031.scaffold00123 189414 1 C T scaffold6900 ScafM SNP 0031.scaffold00123 189468 1 C A scaffold6900 ScafM SNP 0031.scaffold00123 189491 2 AA GT scaffold6900 ScafM SNP 0031.scaffold00123 189506 1 G A scaffold6900 ScafM SNP 0031.scaffold00123 189521 1 C A scaffold6900 ScafM INDEL 0031.scaffold00123 189534 1 . A scaffold6900 ScafM INDEL 0031.scaffold00123 189556 2 AA .T scaffold6900 ScafM SNP 0031.scaffold00123 189572 1 G C scaffold6900 ScafM SNP 0031.scaffold00123 189574 1 A C scaffold6900 ScafM SNP 0031.scaffold00123 189577 1 A G scaffold6900 ScafM SNP 0031.scaffold00123 189596 1 C G scaffold6900 ScafM INDEL 0031.scaffold00123 189645 2 .. TT scaffold6900 ScafM INDEL 0031.scaffold00123 189652 1 . T scaffold6900 ScafM SNP 0031.scaffold00123 189654 1 A T scaffold6900 ScafM SNP 0031.scaffold00123 189699 1 T G scaffold6900 ScafM SNP 0031.scaffold00123 189719 1 T A scaffold6900 ScafM SNP 0031.scaffold00123 189730 1 C G scaffold6900 ScafM SNP 0031.scaffold00123 189787 1 C G scaffold6900 ScafM SNP 0031.scaffold00123 189847 1 G C scaffold6900 ScafM SNP 0031.scaffold00123 189853 1 T C scaffold6900 ScafM SNP 0031.scaffold00123 189863 1 T C scaffold6900 ScafM SNP 0031.scaffold00123 189889 1 T C scaffold6900 ScafM SNP 0031.scaffold00123 189898 1 T A scaffold6900 ScafM SNP 0031.scaffold00123 189946 1 T G scaffold6900 ScafM SNP 0031.scaffold00123 189971 1 T C scaffold6900 ScafM SNP 0031.scaffold00123 190033 1 G A scaffold6900 ReadM INDEL 0031.scaffold00123 206911 1 T . - ScafM SNP 0031.scaffold00123 211537 1 A T scaffold1411 ScafM INDEL 0031.scaffold00123 211539 3 ACC ... scaffold1411 ScafM SNP 0031.scaffold00123 211544 2 GC TA scaffold1411 ScafM SNP 0031.scaffold00123 211548 1 C T scaffold1411 ScafM INDEL 0031.scaffold00123 211551 1 A . scaffold1411 ScafM SNP 0031.scaffold00123 211553 1 C T scaffold1411 ScafM INDEL 0031.scaffold00123 211555 1 C . scaffold1411 ReadM INDEL 0031.scaffold00123 239677 1 C . - ScafM INDEL 0031.scaffold00123 249042 1 . T scaffold1411 ScafM SNP 0031.scaffold00123 251130 1 C T scaffold1411 ScafM INDEL 0031.scaffold00123 251154 1 T . scaffold1411 ScafM SNP 0031.scaffold00123 251158 1 T A scaffold1411 ScafM SNP 0031.scaffold00123 251184 1 A G scaffold1411 ScafM SNP 0031.scaffold00123 251217 1 C A scaffold1411 ScafM SNP 0031.scaffold00123 251245 1 A G scaffold1411 ScafM INDEL 0031.scaffold00123 251254 10 AATACATTTC .......... scaffold1411 ScafM SNP 0031.scaffold00123 251297 1 T A scaffold1411 ScafM SNP 0031.scaffold00123 251323 1 A G scaffold1411 ScafM SNP 0031.scaffold00123 251457 1 G A scaffold1411 ReadM INDEL 0031.scaffold00123 266664 1 . A - ScafM INDEL 0031.scaffold00123 280041 1 G . scaffold1411 ScafM SNP 0031.scaffold00123 280099 2 GC CT scaffold1411 ScafM SNP 0031.scaffold00123 280112 1 A G scaffold1411 ScafM SNP 0031.scaffold00123 280272 1 C T scaffold1411 ScafM SNP 0031.scaffold00123 280294 1 C T scaffold1411 ScafM INDEL 0031.scaffold00123 280295 1 . G scaffold1411 ScafM SNP 0031.scaffold00123 280304 1 C T scaffold1411 ScafM SNP 0031.scaffold00123 280312 1 T A scaffold1411 ScafM SNP 0031.scaffold00123 280334 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 281030 1 A C scaffold1411 ScafM INDEL 0031.scaffold00123 293287 2 GT .. scaffold1411 ScafM INDEL 0031.scaffold00123 293290 1 G . scaffold1411 ScafM SNP 0031.scaffold00123 293293 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293303 1 A T scaffold1411 ScafM SNP 0031.scaffold00123 293306 1 C G scaffold1411 ScafM SNP 0031.scaffold00123 293310 2 GG CC scaffold1411 ScafM SNP 0031.scaffold00123 293314 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293320 1 G A scaffold1411 ScafM SNP 0031.scaffold00123 293324 1 A T scaffold1411 ScafM SNP 0031.scaffold00123 293327 1 C G scaffold1411 ScafM SNP 0031.scaffold00123 293330 3 CAG ACC scaffold1411 ScafM SNP 0031.scaffold00123 293335 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293353 1 G C scaffold1411 ScafM SNP 0031.scaffold00123 293356 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293366 1 A T scaffold1411 ScafM SNP 0031.scaffold00123 293369 1 C G scaffold1411 ScafM SNP 0031.scaffold00123 293373 2 GG CC scaffold1411 ScafM SNP 0031.scaffold00123 293377 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293387 1 A T scaffold1411 ScafM SNP 0031.scaffold00123 293390 1 C G scaffold1411 ScafM SNP 0031.scaffold00123 293393 3 CAG ACC scaffold1411 ScafM SNP 0031.scaffold00123 293398 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293419 1 T C scaffold1411 ScafM INDEL 0031.scaffold00123 293428 1 . T scaffold1411 ScafM INDEL 0031.scaffold00123 293432 1 C . scaffold1411 ScafM SNP 0031.scaffold00123 293440 1 T C scaffold1411 ScafM SNP 0031.scaffold00123 293450 1 A T scaffold1411 ScafM SNP 0031.scaffold00123 293453 1 C G scaffold1411 ScafM SNP 0031.scaffold00123 293461 1 T C scaffold1411 ScafM INDEL 0031.scaffold00123 302968 1 . T scaffold1411 ScafM INDEL 0031.scaffold00123 303903 3 ... AAA scaffold1411 ScafM INDEL 0031.scaffold00123 303907 1 A . scaffold1411 ScafM INDEL 0031.scaffold00123 303922 1 A . scaffold1411 ReadM INDEL 0031.scaffold00123 335451 1 T . - ReadM SNP 0031.scaffold00123 336184 1 G A - ScafM SNP 0031.scaffold00123 351062 1 A G scaffold1411 ReadM SNP 0031.scaffold00123 360157 1 C T - ScafM INDEL 0031.scaffold00123 367770 1 . T scaffold1411 ScafM INDEL 0031.scaffold00123 389893 1 . A scaffold1411 ReadM SNP 0031.scaffold00123 422773 1 C T - ScafM SNP 0031.scaffold00123 441856 1 G A scaffold4066 ScafM SNP 0031.scaffold00123 441997 1 T C scaffold4066 ScafM INDEL 0031.scaffold00123 442139 1 T . scaffold4066 ScafM INDEL 0031.scaffold00123 504426 14 AAGGCAAAGTTTAA .............. scaffold1453 ScafM SNP 0031.scaffold00123 517781 1 T C scaffold10667 ScafM SNP 0031.scaffold00123 517834 1 C T scaffold10667 ScafM SNP 0031.scaffold00123 517959 1 T C scaffold10667 ScafM SNP 0031.scaffold00123 551676 1 T G scaffold5135 ScafM INDEL 0031.scaffold00123 551680 1 T . scaffold5135 ScafM SNP 0031.scaffold00123 551742 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 551764 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 551812 1 G A scaffold5135 ScafM INDEL 0031.scaffold00123 555707 11 ........... CCCCCCCCCCC scaffold5135 Both SNP 0031.scaffold00123 562812 1 T C scaffold5135 ScafM INDEL 0031.scaffold00123 565787 17 ................. CCCCCCCCCCCCCCCCC scaffold5135 ScafM SNP 0031.scaffold00123 569554 1 G A scaffold18673 ScafM SNP 0031.scaffold00123 569601 1 A G scaffold18673 Both SNP 0031.scaffold00123 574981 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 577562 1 G C scaffold5135 ScafM INDEL 0031.scaffold00123 580523 3 ... AAA scaffold5135 ScafM SNP 0031.scaffold00123 582984 1 C T scaffold8187 ScafM SNP 0031.scaffold00123 582988 1 T C scaffold8187 ScafM SNP 0031.scaffold00123 583006 2 CT TC scaffold8187 ScafM SNP 0031.scaffold00123 583010 1 G T scaffold8187 ScafM SNP 0031.scaffold00123 583054 1 A G scaffold8187 ScafM SNP 0031.scaffold00123 583056 1 G A scaffold8187 ReadM INDEL 0031.scaffold00123 602062 1 . A - ScafM INDEL 0031.scaffold00123 603361 1 . T scaffold5135 ScafM SNP 0031.scaffold00123 615079 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 615506 1 G T scaffold5135 ScafM SNP 0031.scaffold00123 615852 1 A G scaffold5135 ReadM SNP 0031.scaffold00123 641970 1 T C - Both INDEL 0031.scaffold00123 649236 1 . T scaffold5135 ScafM SNP 0031.scaffold00123 654113 2 CA AC scaffold5135 Both SNP 0031.scaffold00123 654228 1 T G scaffold5135 ReadM SNP 0031.scaffold00123 656144 1 T A - Both INDEL 0031.scaffold00123 657209 1 A . scaffold5135 Both SNP 0031.scaffold00123 657592 1 T A scaffold5135 ReadM SNP 0031.scaffold00123 658324 1 T A - Both INDEL 0031.scaffold00123 658957 1 . A scaffold5135 Both SNP 0031.scaffold00123 660277 1 G A scaffold5135 Both SNP 0031.scaffold00123 660788 1 T G scaffold5135 Both SNP 0031.scaffold00123 661061 1 G A scaffold5135 Both SNP 0031.scaffold00123 661329 1 T C scaffold5135 Both SNP 0031.scaffold00123 661829 1 A C scaffold5135 Both SNP 0031.scaffold00123 662107 1 A T scaffold5135 Both SNP 0031.scaffold00123 662149 1 A G scaffold5135 ReadM SNP 0031.scaffold00123 662619 1 G A - ReadM SNP 0031.scaffold00123 662974 1 G T - ReadM SNP 0031.scaffold00123 663268 1 A T - ScafM SNP 0031.scaffold00123 663533 1 C A scaffold5135 ReadM SNP 0031.scaffold00123 663836 1 A C - ReadM SNP 0031.scaffold00123 664230 1 T C - ScafM SNP 0031.scaffold00123 664459 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 664906 1 C A scaffold5135 ScafM SNP 0031.scaffold00123 670953 1 G T scaffold5135 Both SNP 0031.scaffold00123 671473 1 A T scaffold5135 Both SNP 0031.scaffold00123 671785 1 C A scaffold5135 Both SNP 0031.scaffold00123 672071 1 C T scaffold5135 ScafM INDEL 0031.scaffold00123 672651 2 .C AA scaffold5135 Both SNP 0031.scaffold00123 672751 1 C T scaffold5135 Both SNP 0031.scaffold00123 672808 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 673637 1 T A scaffold5135 ReadM SNP 0031.scaffold00123 675070 1 C T - ReadM SNP 0031.scaffold00123 675589 1 C A - ReadM SNP 0031.scaffold00123 676143 1 C T - ScafM SNP 0031.scaffold00123 676249 1 T G scaffold5135 ScafM SNP 0031.scaffold00123 676258 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 676282 2 TA AT scaffold5135 ScafM INDEL 0031.scaffold00123 676936 1 . A scaffold5135 ScafM SNP 0031.scaffold00123 676984 1 T C scaffold5135 ScafM INDEL 0031.scaffold00123 677043 1 . A scaffold5135 Both SNP 0031.scaffold00123 678460 1 A G scaffold5135 Both INDEL 0031.scaffold00123 678717 3 ... TAT scaffold5135 Both INDEL 0031.scaffold00123 678767 1 T . scaffold5135 Both SNP 0031.scaffold00123 678954 1 T C scaffold5135 ReadM SNP 0031.scaffold00123 680766 1 A T - ReadM SNP 0031.scaffold00123 680915 1 C T - ReadM SNP 0031.scaffold00123 685686 1 G A - Both SNP 0031.scaffold00123 685815 1 T C scaffold5135 ReadM SNP 0031.scaffold00123 685978 1 A G - Both SNP 0031.scaffold00123 686165 1 A G scaffold5135 Both SNP 0031.scaffold00123 686205 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 686259 2 TT CC scaffold5135 ScafM SNP 0031.scaffold00123 686449 1 T A scaffold5135 ScafM INDEL 0031.scaffold00123 686600 2 .. AT scaffold5135 ScafM SNP 0031.scaffold00123 686662 1 C G scaffold5135 ScafM SNP 0031.scaffold00123 686722 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 686726 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 686733 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 686774 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 686777 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 686781 2 CT TA scaffold5135 ScafM INDEL 0031.scaffold00123 686789 4 .... TTTT scaffold5135 ScafM SNP 0031.scaffold00123 686792 1 A T scaffold5135 ScafM SNP 0031.scaffold00123 686804 1 A C scaffold5135 ScafM SNP 0031.scaffold00123 686833 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 686892 1 C A scaffold5135 ScafM SNP 0031.scaffold00123 686914 1 T C scaffold5135 ScafM INDEL 0031.scaffold00123 686916 1 . T scaffold5135 ScafM SNP 0031.scaffold00123 686973 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 687224 1 C T scaffold5135 ReadM SNP 0031.scaffold00123 687458 1 G A - ReadM SNP 0031.scaffold00123 689187 1 A G - ReadM SNP 0031.scaffold00123 689523 1 G A - ReadM SNP 0031.scaffold00123 689706 1 A G - ReadM SNP 0031.scaffold00123 689765 1 C T - ReadM SNP 0031.scaffold00123 693481 1 A G - Both SNP 0031.scaffold00123 693719 1 A C scaffold5135 ReadM SNP 0031.scaffold00123 693794 1 G T - ReadM SNP 0031.scaffold00123 694146 1 A G - ScafM INDEL 0031.scaffold00123 694924 44 ............................................ TATGAAATCTTAAGTGTTGGACATGGAAACAATGTTACGATTTG scaffold5135 Both SNP 0031.scaffold00123 696578 1 C T scaffold5135 Both SNP 0031.scaffold00123 696952 1 T C scaffold5135 Both SNP 0031.scaffold00123 697369 1 C T scaffold5135 Both SNP 0031.scaffold00123 697669 1 C T scaffold5135 Both SNP 0031.scaffold00123 697685 1 C A scaffold5135 Both SNP 0031.scaffold00123 697754 1 G A scaffold5135 Both SNP 0031.scaffold00123 697771 1 T C scaffold5135 Both SNP 0031.scaffold00123 697792 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 697855 2 CA TC scaffold5135 Both SNP 0031.scaffold00123 697890 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 697925 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 697937 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 697942 1 G C scaffold5135 ScafM SNP 0031.scaffold00123 697956 1 T C scaffold5135 Both SNP 0031.scaffold00123 697990 1 A C scaffold5135 Both SNP 0031.scaffold00123 698009 1 G A scaffold5135 Both SNP 0031.scaffold00123 698052 1 G A scaffold5135 Both SNP 0031.scaffold00123 698169 1 C T scaffold5135 Both SNP 0031.scaffold00123 698193 1 A G scaffold5135 Both SNP 0031.scaffold00123 698289 1 C T scaffold5135 Both SNP 0031.scaffold00123 698292 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 698466 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 698516 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 698525 1 A T scaffold5135 ScafM INDEL 0031.scaffold00123 698590 1 A . scaffold5135 ScafM SNP 0031.scaffold00123 698604 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 698674 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 698679 1 C G scaffold5135 ScafM INDEL 0031.scaffold00123 698743 6 AAAGTT ...... scaffold5135 ScafM INDEL 0031.scaffold00123 698813 4 .... TTTA scaffold5135 ScafM INDEL 0031.scaffold00123 698898 1 G . scaffold5135 ScafM SNP 0031.scaffold00123 698902 1 A C scaffold5135 ScafM INDEL 0031.scaffold00123 698914 1 . A scaffold5135 ScafM SNP 0031.scaffold00123 698937 1 G A scaffold5135 ScafM INDEL 0031.scaffold00123 698973 28 ............................ GAAAAAAAGTTGTCAACAAGTTTAGAGC scaffold5135 ScafM SNP 0031.scaffold00123 699065 1 G A scaffold5135 Both SNP 0031.scaffold00123 699237 1 G C scaffold5135 Both SNP 0031.scaffold00123 699283 1 A T scaffold5135 ScafM INDEL 0031.scaffold00123 699443 2 .. TA scaffold5135 ScafM SNP 0031.scaffold00123 699450 1 C T scaffold5135 ScafM INDEL 0031.scaffold00123 699508 31 ............................... TTTTACAAAGGCGATACCCGAACTCCCGAAG scaffold5135 ScafM SNP 0031.scaffold00123 699544 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 699582 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 699584 1 A C scaffold5135 ScafM SNP 0031.scaffold00123 699590 1 G T scaffold5135 ScafM SNP 0031.scaffold00123 699611 1 T C scaffold5135 ReadM SNP 0031.scaffold00123 699795 1 A G - ReadM INDEL 0031.scaffold00123 699801 1 T . - ReadM SNP 0031.scaffold00123 699896 1 C T - ReadM SNP 0031.scaffold00123 699927 1 C T - ReadM SNP 0031.scaffold00123 699974 1 T C - ReadM SNP 0031.scaffold00123 700149 1 C T - ReadM SNP 0031.scaffold00123 700165 1 G C - ReadM SNP 0031.scaffold00123 700226 1 A G - ReadM SNP 0031.scaffold00123 700961 1 T A - Both SNP 0031.scaffold00123 701006 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 701068 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 701073 1 T G scaffold5135 ScafM SNP 0031.scaffold00123 701087 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 701102 1 G T scaffold5135 ScafM INDEL 0031.scaffold00123 701125 2 .. AG scaffold5135 ScafM INDEL 0031.scaffold00123 701347 2 AT .. scaffold5135 ScafM SNP 0031.scaffold00123 702007 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 702012 1 C T scaffold5135 ScafM SNP 0031.scaffold00123 702032 1 A T scaffold5135 ScafM INDEL 0031.scaffold00123 702054 2 .. AT scaffold5135 ScafM INDEL 0031.scaffold00123 702298 3 ... AAC scaffold5135 ScafM INDEL 0031.scaffold00123 702314 25 ......................... TTCTTTAAAAAAAAACTACTAAAGT scaffold5135 ScafM SNP 0031.scaffold00123 702364 1 T A scaffold5135 ScafM INDEL 0031.scaffold00123 702392 1 A . scaffold5135 ScafM SNP 0031.scaffold00123 702404 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 702459 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 702491 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 702544 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 702563 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 702641 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 702662 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 702672 1 G T scaffold5135 ScafM SNP 0031.scaffold00123 702677 1 C T scaffold5135 ScafM INDEL 0031.scaffold00123 703138 3 ... AAT scaffold5135 ScafM SNP 0031.scaffold00123 703223 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 703236 1 G A scaffold5135 ScafM INDEL 0031.scaffold00123 703247 1 . T scaffold5135 ScafM SNP 0031.scaffold00123 703296 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 703310 1 T C scaffold5135 ScafM SNP 0031.scaffold00123 703316 1 T A scaffold5135 ScafM SNP 0031.scaffold00123 703330 1 C A scaffold5135 ScafM INDEL 0031.scaffold00123 703333 3 TAA ..C scaffold5135 ReadM SNP 0031.scaffold00123 703818 1 G A - ReadM SNP 0031.scaffold00123 703820 1 T A - Both INDEL 0031.scaffold00123 703904 1 . T scaffold5135 Both SNP 0031.scaffold00123 703925 1 G T scaffold5135 Both SNP 0031.scaffold00123 703976 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 704000 1 A G scaffold5135 ReadM SNP 0031.scaffold00123 704127 1 T A - ReadM SNP 0031.scaffold00123 704174 1 C T - ReadM SNP 0031.scaffold00123 704221 1 T C - ScafM SNP 0031.scaffold00123 704320 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 704324 1 A G scaffold5135 ScafM SNP 0031.scaffold00123 704418 1 T G scaffold5135 ScafM INDEL 0031.scaffold00123 704439 6 ...... AGGAGA scaffold5135 Both SNP 0031.scaffold00123 704452 1 T C scaffold5135 Both SNP 0031.scaffold00123 704653 1 G A scaffold5135 ScafM SNP 0031.scaffold00123 704701 1 T C scaffold5135 ScafM INDEL 0031.scaffold00123 704708 2 .. GC scaffold5135 ScafM SNP 0031.scaffold00123 704712 1 C T scaffold5135 Both SNP 0031.scaffold00123 704880 1 G A scaffold5135 ScafM INDEL 0031.scaffold00123 704914 11 ........... GTTAGGAAAAT scaffold5135 ScafM INDEL 0031.scaffold00123 704915 1 . C scaffold5135 ScafM SNP 0031.scaffold00123 704937 1 C G scaffold5135 ScafM SNP 0031.scaffold00123 704972 1 T A scaffold5135 ReadM SNP 0031.scaffold00123 705161 1 C T - ReadM SNP 0031.scaffold00123 705194 1 A G - ScafM SNP 0031.scaffold00123 705807 1 T C scaffold14860 ScafM SNP 0031.scaffold00123 705830 1 T A scaffold14860 ScafM INDEL 0031.scaffold00123 705845 1 T . scaffold14860 ScafM INDEL 0031.scaffold00123 705859 1 G . scaffold14860 ScafM SNP 0031.scaffold00123 705868 1 G A scaffold14860 ScafM SNP 0031.scaffold00123 706694 1 T A scaffold3849 ScafM SNP 0031.scaffold00123 706699 1 T C scaffold3849 ReadM SNP 0031.scaffold00123 708070 1 T C - ReadM SNP 0031.scaffold00123 708211 1 A C - ReadM SNP 0031.scaffold00123 708260 1 A C - ReadM SNP 0031.scaffold00123 708265 1 G T - ScafM SNP 0031.scaffold00123 711893 1 T C scaffold7362 ScafM SNP 0031.scaffold00123 711899 1 A G scaffold7362 ScafM SNP 0031.scaffold00123 711922 2 GA AG scaffold7362 ScafM SNP 0031.scaffold00123 711930 1 T C scaffold7362 ScafM SNP 0031.scaffold00123 711939 1 T C scaffold7362 ScafM SNP 0031.scaffold00123 711941 1 A G scaffold7362 ReadM SNP 0031.scaffold00123 712473 1 G C - ReadM SNP 0031.scaffold00123 712490 1 G A - ReadM SNP 0031.scaffold00123 712522 1 C T - ReadM SNP 0031.scaffold00123 712583 1 G T - ReadM SNP 0031.scaffold00123 712626 1 A G - ReadM SNP 0031.scaffold00123 712836 1 T C - ReadM SNP 0031.scaffold00123 712851 1 T C - ReadM SNP 0031.scaffold00123 712897 1 C A - Both SNP 0031.scaffold00123 712925 1 C T scaffold7362 Both SNP 0031.scaffold00123 712954 1 G T scaffold7362 Both SNP 0031.scaffold00123 712960 1 T A scaffold7362 Both SNP 0031.scaffold00123 713016 1 T G scaffold7362 Both SNP 0031.scaffold00123 713058 1 C T scaffold7362 Both SNP 0031.scaffold00123 713087 1 G A scaffold7362 ReadM SNP 0031.scaffold00123 713132 1 T C - ReadM SNP 0031.scaffold00123 713264 1 A G - Both SNP 0031.scaffold00123 713399 1 C G scaffold7362 Both SNP 0031.scaffold00123 713428 1 G A scaffold7362 ScafM SNP 0031.scaffold00123 713589 1 A G scaffold7362 ScafM SNP 0031.scaffold00123 713606 2 TG CC scaffold7362 ScafM INDEL 0031.scaffold00123 713610 1 . A scaffold7362 ScafM INDEL 0031.scaffold00123 713611 1 . A scaffold7362 ScafM INDEL 0031.scaffold00123 713612 1 . T scaffold7362 ScafM SNP 0031.scaffold00123 713634 1 G C scaffold7362 ScafM SNP 0031.scaffold00123 713649 1 C G scaffold7362 ScafM SNP 0031.scaffold00123 713676 1 G T scaffold7362 ScafM SNP 0031.scaffold00123 713682 1 G T scaffold7362 ScafM SNP 0031.scaffold00123 713686 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 713703 1 A G scaffold7362 ScafM SNP 0031.scaffold00123 713718 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 713741 1 T A scaffold7362 ScafM SNP 0031.scaffold00123 713760 1 T C scaffold7362 ScafM SNP 0031.scaffold00123 713780 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 713785 1 C T scaffold7362 Both SNP 0031.scaffold00123 713793 1 T C scaffold7362 ReadM SNP 0031.scaffold00123 713876 1 G A - ReadM SNP 0031.scaffold00123 713951 1 T G - ReadM SNP 0031.scaffold00123 714014 1 C T - ReadM SNP 0031.scaffold00123 714264 1 C T - ReadM SNP 0031.scaffold00123 714418 1 A T - ReadM SNP 0031.scaffold00123 714485 1 G A - ReadM SNP 0031.scaffold00123 714517 1 C G - ReadM SNP 0031.scaffold00123 714538 1 G A - ReadM SNP 0031.scaffold00123 714590 1 C G - ReadM SNP 0031.scaffold00123 714604 1 G C - ReadM SNP 0031.scaffold00123 714794 1 C T - ReadM SNP 0031.scaffold00123 714796 1 A G - ReadM SNP 0031.scaffold00123 714872 1 A G - ReadM SNP 0031.scaffold00123 714902 1 T C - ReadM SNP 0031.scaffold00123 715033 1 T A - ReadM SNP 0031.scaffold00123 715159 1 A T - ReadM SNP 0031.scaffold00123 715162 1 T C - ReadM INDEL 0031.scaffold00123 715228 1 T . - ReadM SNP 0031.scaffold00123 715357 1 T C - ReadM SNP 0031.scaffold00123 715468 1 A G - ReadM SNP 0031.scaffold00123 715523 1 T A - ReadM SNP 0031.scaffold00123 715580 1 C T - ReadM SNP 0031.scaffold00123 715685 1 T A - ReadM SNP 0031.scaffold00123 715705 1 G A - ReadM SNP 0031.scaffold00123 715746 1 A G - ReadM SNP 0031.scaffold00123 715909 1 T C - ReadM SNP 0031.scaffold00123 715965 1 G T - ReadM SNP 0031.scaffold00123 717682 1 C T - ReadM SNP 0031.scaffold00123 717705 1 T A - ReadM SNP 0031.scaffold00123 717783 1 A G - ReadM SNP 0031.scaffold00123 717810 1 A C - ReadM SNP 0031.scaffold00123 717852 1 T A - ReadM SNP 0031.scaffold00123 717917 1 G T - ReadM SNP 0031.scaffold00123 717942 1 C T - ReadM SNP 0031.scaffold00123 717969 1 A G - ReadM SNP 0031.scaffold00123 718309 1 C T - ReadM SNP 0031.scaffold00123 718421 1 A G - Both SNP 0031.scaffold00123 718515 1 T A scaffold7362 ScafM SNP 0031.scaffold00123 718598 1 G A scaffold7362 ScafM SNP 0031.scaffold00123 718612 1 T C scaffold7362 ReadM SNP 0031.scaffold00123 721188 1 G A - ReadM SNP 0031.scaffold00123 721202 1 G A - ReadM SNP 0031.scaffold00123 721498 1 T C - ScafM SNP 0031.scaffold00123 721634 1 A G scaffold7362 ReadM SNP 0031.scaffold00123 721695 1 T G - ReadM SNP 0031.scaffold00123 722013 1 G A - ReadM SNP 0031.scaffold00123 722244 1 T C - ReadM SNP 0031.scaffold00123 722315 1 G A - ReadM SNP 0031.scaffold00123 722496 1 A G - ReadM SNP 0031.scaffold00123 722499 1 A G - ReadM SNP 0031.scaffold00123 722751 1 C T - ReadM SNP 0031.scaffold00123 722790 1 T C - ScafM SNP 0031.scaffold00123 723168 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 723195 1 A G scaffold7362 ScafM SNP 0031.scaffold00123 723198 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 723200 1 C T scaffold7362 ScafM SNP 0031.scaffold00123 723202 1 A G scaffold7362 ScafM SNP 0031.scaffold00123 723235 1 G A scaffold7362 ReadM INDEL 0031.scaffold00123 723660 1 G . - ReadM SNP 0031.scaffold00123 723671 2 TG CA - ReadM SNP 0031.scaffold00123 723728 1 C T - ReadM SNP 0031.scaffold00123 723776 1 C T - ReadM SNP 0031.scaffold00123 723781 1 C T - ReadM SNP 0031.scaffold00123 723937 1 C T - ReadM SNP 0031.scaffold00123 723947 1 T C - ReadM SNP 0031.scaffold00123 724108 1 T G - ReadM INDEL 0031.scaffold00123 724199 1 . T - ReadM SNP 0031.scaffold00123 724264 1 T C - ReadM SNP 0031.scaffold00123 724290 1 C T - ReadM SNP 0031.scaffold00123 724537 1 T C - ReadM SNP 0031.scaffold00123 724550 1 C T - ReadM SNP 0031.scaffold00123 724692 1 C G - ReadM SNP 0031.scaffold00123 724754 1 A G - ReadM SNP 0031.scaffold00123 724769 1 G A - ReadM SNP 0031.scaffold00123 724812 1 G A - ReadM SNP 0031.scaffold00123 724868 1 T G - ReadM SNP 0031.scaffold00123 724880 1 A G - ReadM SNP 0031.scaffold00123 724893 1 C A - ReadM SNP 0031.scaffold00123 724959 1 G A - ReadM SNP 0031.scaffold00123 725129 1 G A - ReadM SNP 0031.scaffold00123 725276 1 G T - ReadM SNP 0031.scaffold00123 725313 1 G A - ReadM SNP 0031.scaffold00123 725418 1 G A - ReadM SNP 0031.scaffold00123 725564 1 C T - ReadM SNP 0031.scaffold00123 725666 1 A G - ScafM INDEL 0031.scaffold00123 726174 3 ... ATT scaffold7362 ScafM SNP 0031.scaffold00123 726187 1 G A scaffold7362 Both SNP 0031.scaffold00123 726298 1 A C scaffold7362 ReadM INDEL 0031.scaffold00123 726581 1 . A - ReadM INDEL 0031.scaffold00123 727035 1 . T - ReadM SNP 0031.scaffold00123 727180 1 A G - ReadM SNP 0031.scaffold00123 728951 1 A T - ReadM SNP 0031.scaffold00123 729271 1 C T - ReadM SNP 0031.scaffold00123 729366 1 T C - ReadM SNP 0031.scaffold00123 729427 1 T C - ReadM SNP 0031.scaffold00123 729464 1 A G - ScafM SNP 0031.scaffold00123 730973 1 T A scaffold27691 ScafM SNP 0031.scaffold00123 730980 1 T C scaffold27691 ScafM SNP 0031.scaffold00123 730982 1 G A scaffold27691 ScafM SNP 0031.scaffold00123 731073 1 C A scaffold27691 Both SNP 0031.scaffold00123 731084 1 G T scaffold27691 Both SNP 0031.scaffold00123 731089 1 T C scaffold27691 Both SNP 0031.scaffold00123 731177 1 A C scaffold27691 ScafM SNP 0031.scaffold00123 731333 1 A T scaffold27691 ScafM SNP 0031.scaffold00123 731351 1 A C scaffold27691 Both SNP 0031.scaffold00123 731395 1 T C scaffold27691 Both SNP 0031.scaffold00123 731506 1 T A scaffold27691 Both SNP 0031.scaffold00123 731547 1 C T scaffold27691 ReadM SNP 0031.scaffold00123 731683 1 C A - ReadM SNP 0031.scaffold00123 731697 1 A G - ReadM SNP 0031.scaffold00123 731749 1 G A - ReadM SNP 0031.scaffold00123 731772 1 A T - ReadM SNP 0031.scaffold00123 731797 1 A T - ReadM SNP 0031.scaffold00123 731803 1 T C - ReadM SNP 0031.scaffold00123 731894 1 T C - ReadM SNP 0031.scaffold00123 731994 1 G A - ReadM SNP 0031.scaffold00123 732093 1 A G - Both SNP 0031.scaffold00123 733009 1 A G scaffold27691 ReadM SNP 0031.scaffold00123 733150 1 C T - ReadM SNP 0031.scaffold00123 733167 1 A T - ReadM SNP 0031.scaffold00123 733324 1 A G - ReadM SNP 0031.scaffold00123 733652 1 G T - ReadM SNP 0031.scaffold00123 733685 1 C T - ReadM SNP 0031.scaffold00123 733740 1 C T - ReadM SNP 0031.scaffold00123 733924 1 C A - ReadM SNP 0031.scaffold00123 734147 1 A C - ReadM SNP 0031.scaffold00123 734173 1 G T - ReadM SNP 0031.scaffold00123 734200 1 C G - ReadM SNP 0031.scaffold00123 734228 1 T C - ReadM SNP 0031.scaffold00123 734830 1 A T - ReadM SNP 0031.scaffold00123 734861 1 C A - ReadM SNP 0031.scaffold00123 734893 1 C T - ReadM SNP 0031.scaffold00123 735137 1 C T - ReadM SNP 0031.scaffold00123 735149 1 G A - ReadM SNP 0031.scaffold00123 735232 1 G T - ReadM SNP 0031.scaffold00123 735327 1 C T - ReadM SNP 0031.scaffold00123 735426 1 C T - ReadM SNP 0031.scaffold00123 735514 1 A G - ReadM SNP 0031.scaffold00123 735543 1 A G - ReadM SNP 0031.scaffold00123 735640 1 G A - ReadM SNP 0031.scaffold00123 735648 1 C A - ReadM SNP 0031.scaffold00123 735721 1 T C - ScafM SNP 0031.scaffold00123 736386 2 GA TT scaffold30346 ScafM SNP 0031.scaffold00123 736475 1 A G scaffold30346 ScafM SNP 0031.scaffold00123 736482 1 G T scaffold30346 ScafM SNP 0031.scaffold00123 736516 1 T C scaffold30346 ScafM SNP 0031.scaffold00123 736523 1 C A scaffold30346 ScafM INDEL 0031.scaffold00123 736572 2 .. TT scaffold30346 ScafM SNP 0031.scaffold00123 736594 1 T C scaffold30346 ScafM SNP 0031.scaffold00123 736612 1 C G scaffold30346 ScafM SNP 0031.scaffold00123 736676 1 A G scaffold30346 ScafM SNP 0031.scaffold00123 736698 2 TA CG scaffold30346 ScafM SNP 0031.scaffold00123 736708 1 T C scaffold30346 ScafM SNP 0031.scaffold00123 736727 1 A T scaffold30346 ScafM SNP 0031.scaffold00123 736741 1 T G scaffold30346 ScafM SNP 0031.scaffold00123 736798 1 A T scaffold30346 ScafM SNP 0031.scaffold00123 736821 1 C T scaffold30346 ReadM SNP 0031.scaffold00123 737279 1 T G - ReadM SNP 0031.scaffold00123 737722 1 C T - ReadM SNP 0031.scaffold00123 737802 1 G A - ReadM SNP 0031.scaffold00123 737807 1 C A - ReadM SNP 0031.scaffold00123 738161 1 A G - ReadM SNP 0031.scaffold00123 738357 1 C A - ReadM SNP 0031.scaffold00123 738375 1 G A - ReadM SNP 0031.scaffold00123 738400 1 G T - ScafM INDEL 0031.scaffold00123 738640 1 . T scaffold30346 ScafM SNP 0031.scaffold00123 738650 1 G C scaffold30346 ScafM SNP 0031.scaffold00123 738658 3 TAA ATT scaffold30346 ScafM SNP 0031.scaffold00123 738692 1 C T scaffold30346 Both SNP 0031.scaffold00123 738763 1 T A scaffold30346 Both SNP 0031.scaffold00123 738787 1 T C scaffold30346 Both SNP 0031.scaffold00123 738794 1 C T scaffold30346 Both SNP 0031.scaffold00123 738823 1 A G scaffold30346 ReadM SNP 0031.scaffold00123 738875 1 C T - ReadM SNP 0031.scaffold00123 738898 1 T G - ReadM SNP 0031.scaffold00123 739339 1 T A - ReadM SNP 0031.scaffold00123 739431 1 C T - ReadM SNP 0031.scaffold00123 739461 1 C T - ReadM SNP 0031.scaffold00123 739549 1 G A - ReadM SNP 0031.scaffold00123 739606 1 C G - ReadM SNP 0031.scaffold00123 739639 1 A G - ReadM SNP 0031.scaffold00123 739665 1 T C - ReadM SNP 0031.scaffold00123 739740 1 T A - ReadM SNP 0031.scaffold00123 739815 1 A C - ReadM SNP 0031.scaffold00123 739948 1 T C - ReadM SNP 0031.scaffold00123 740027 1 G C - ReadM SNP 0031.scaffold00123 740056 1 T C - ReadM SNP 0031.scaffold00123 740091 1 A G - ReadM SNP 0031.scaffold00123 740105 1 T C - ReadM SNP 0031.scaffold00123 740170 1 G A - ReadM SNP 0031.scaffold00123 740192 1 G A - ReadM SNP 0031.scaffold00123 740222 1 C A - ReadM SNP 0031.scaffold00123 740303 1 C A - ReadM SNP 0031.scaffold00123 740315 1 C T - ReadM SNP 0031.scaffold00123 740322 1 T A - ReadM SNP 0031.scaffold00123 740375 1 T C - ReadM SNP 0031.scaffold00123 740384 1 C T - ReadM SNP 0031.scaffold00123 740475 1 T C - ReadM SNP 0031.scaffold00123 740486 1 G T - ReadM SNP 0031.scaffold00123 740496 1 A G - ReadM SNP 0031.scaffold00123 740539 1 T G - ReadM SNP 0031.scaffold00123 740734 1 A C - ReadM SNP 0031.scaffold00123 740757 1 G A - ReadM SNP 0031.scaffold00123 740817 1 C A - ReadM INDEL 0031.scaffold00123 740861 1 C . - ReadM SNP 0031.scaffold00123 740878 1 T C - ReadM SNP 0031.scaffold00123 740925 1 A G - ReadM SNP 0031.scaffold00123 740966 1 G A - ReadM SNP 0031.scaffold00123 741017 1 T G - ReadM SNP 0031.scaffold00123 741429 1 C T - ReadM SNP 0031.scaffold00123 741469 1 C T - ReadM SNP 0031.scaffold00123 741488 1 G T - ReadM SNP 0031.scaffold00123 741562 1 G T - ReadM SNP 0031.scaffold00123 741602 1 G A - ReadM SNP 0031.scaffold00123 741628 1 G T - ReadM SNP 0031.scaffold00123 741860 1 A T - ReadM SNP 0031.scaffold00123 741898 1 C G - ReadM SNP 0031.scaffold00123 741955 1 C T - ReadM SNP 0031.scaffold00123 742081 1 T G - ReadM SNP 0031.scaffold00123 742189 1 C T - ReadM SNP 0031.scaffold00123 742196 1 G T - ScafM SNP 0031.scaffold00123 742551 1 C A scaffold30346 ScafM SNP 0031.scaffold00123 742569 1 T G scaffold30346 ScafM SNP 0031.scaffold00123 742614 1 C T scaffold30346 ScafM SNP 0031.scaffold00123 742648 1 T A scaffold30346 Both SNP 0031.scaffold00123 743661 1 C A scaffold20613 Both INDEL 0031.scaffold00123 743742 1 . G scaffold20613 Both SNP 0031.scaffold00123 743780 1 C G scaffold20613 Both SNP 0031.scaffold00123 743832 1 T G scaffold20613 ScafM SNP 0031.scaffold00123 743924 2 TC AA scaffold20613 ScafM SNP 0031.scaffold00123 743927 1 A T scaffold20613 ScafM INDEL 0031.scaffold00123 743928 2 .T AG scaffold20613 ScafM INDEL 0031.scaffold00123 743930 1 . G scaffold20613 ScafM INDEL 0031.scaffold00123 743932 2 .. CA scaffold20613 ScafM INDEL 0031.scaffold00123 743934 3 ... GTT scaffold20613 ScafM INDEL 0031.scaffold00123 743993 1 T . scaffold20613 ScafM SNP 0031.scaffold00123 743995 1 T C scaffold20613 ScafM SNP 0031.scaffold00123 744001 1 G A scaffold20613 ScafM SNP 0031.scaffold00123 744004 1 G T scaffold20613 ScafM SNP 0031.scaffold00123 744009 3 TTC AAT scaffold20613 ScafM INDEL 0031.scaffold00123 744013 2 GG .. scaffold20613 ReadM SNP 0031.scaffold00123 744095 1 A G - ReadM SNP 0031.scaffold00123 744115 1 A G - ReadM SNP 0031.scaffold00123 744227 1 T G - ReadM SNP 0031.scaffold00123 744341 1 A T - ReadM SNP 0031.scaffold00123 744375 1 T C - Both SNP 0031.scaffold00123 744653 1 A C scaffold20613 Both SNP 0031.scaffold00123 744701 1 T A scaffold20613 Both SNP 0031.scaffold00123 744719 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745096 1 G A scaffold20613 ScafM SNP 0031.scaffold00123 745102 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745113 1 A T scaffold20613 ScafM SNP 0031.scaffold00123 745126 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745173 1 G A scaffold20613 ScafM SNP 0031.scaffold00123 745221 1 G A scaffold20613 ScafM SNP 0031.scaffold00123 745224 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745226 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745234 1 G A scaffold20613 ScafM SNP 0031.scaffold00123 745265 1 A G scaffold20613 ScafM SNP 0031.scaffold00123 745291 2 CC TT scaffold20613 ScafM INDEL 0031.scaffold00123 745303 12 GAGAACGTCGGC ............ scaffold20613 ScafM SNP 0031.scaffold00123 745341 1 T C scaffold20613 ReadM SNP 0031.scaffold00123 746615 1 C T - ReadM SNP 0031.scaffold00123 746618 1 T C - ReadM SNP 0031.scaffold00123 746675 1 A C - ReadM SNP 0031.scaffold00123 746711 1 G A - ReadM SNP 0031.scaffold00123 746779 1 T G - ReadM SNP 0031.scaffold00123 746802 1 A T - ReadM SNP 0031.scaffold00123 746826 1 C T - ReadM SNP 0031.scaffold00123 747068 1 A T - ReadM SNP 0031.scaffold00123 747109 1 A G - ReadM SNP 0031.scaffold00123 747120 1 T C - ReadM SNP 0031.scaffold00123 747144 1 A C - ReadM SNP 0031.scaffold00123 747260 1 G A - ScafM SNP 0031.scaffold00123 747432 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 747438 1 A G scaffold13682 Both SNP 0031.scaffold00123 747458 1 C G scaffold13682 Both SNP 0031.scaffold00123 747517 1 G C scaffold13682 ScafM SNP 0031.scaffold00123 747553 1 C T scaffold13682 ScafM SNP 0031.scaffold00123 747579 1 C G scaffold13682 ScafM INDEL 0031.scaffold00123 747650 12 GCAAGAACGCCG ............ scaffold13682 ScafM INDEL 0031.scaffold00123 747675 1 T . scaffold13682 ScafM SNP 0031.scaffold00123 748221 1 A C scaffold13682 ScafM SNP 0031.scaffold00123 748241 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 748254 1 C T scaffold13682 ScafM SNP 0031.scaffold00123 748271 1 A G scaffold13682 ScafM SNP 0031.scaffold00123 748288 1 C T scaffold13682 ReadM SNP 0031.scaffold00123 748442 1 A T - ReadM SNP 0031.scaffold00123 748491 1 A G - Both SNP 0031.scaffold00123 748582 1 G A scaffold13682 Both SNP 0031.scaffold00123 748585 1 A T scaffold13682 Both SNP 0031.scaffold00123 748603 1 T C scaffold13682 Both SNP 0031.scaffold00123 748664 1 C T scaffold13682 Both SNP 0031.scaffold00123 748708 1 C T scaffold13682 Both SNP 0031.scaffold00123 748734 1 A G scaffold13682 Both SNP 0031.scaffold00123 748798 1 T G scaffold13682 Both SNP 0031.scaffold00123 748809 1 T G scaffold13682 Both SNP 0031.scaffold00123 748829 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 748862 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 748881 1 G A scaffold13682 Both SNP 0031.scaffold00123 748893 1 G A scaffold13682 Both SNP 0031.scaffold00123 748988 1 T A scaffold13682 Both SNP 0031.scaffold00123 749019 1 A T scaffold13682 Both SNP 0031.scaffold00123 749043 1 C T scaffold13682 Both SNP 0031.scaffold00123 749066 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 750500 1 A G scaffold13682 Both SNP 0031.scaffold00123 750546 1 G A scaffold13682 ScafM SNP 0031.scaffold00123 750663 1 G T scaffold13682 ScafM INDEL 0031.scaffold00123 750668 4 TTTA .... scaffold13682 Both SNP 0031.scaffold00123 750711 1 A G scaffold13682 ScafM INDEL 0031.scaffold00123 750769 1 T . scaffold13682 ScafM INDEL 0031.scaffold00123 750786 5 ..... GCCTG scaffold13682 ScafM INDEL 0031.scaffold00123 750789 12 ............ GGGCCCAAATTT scaffold13682 ScafM INDEL 0031.scaffold00123 750791 3 ... GGC scaffold13682 ScafM SNP 0031.scaffold00123 750814 1 C T scaffold13682 Both SNP 0031.scaffold00123 750967 1 A G scaffold13682 Both SNP 0031.scaffold00123 750992 1 G A scaffold13682 ScafM SNP 0031.scaffold00123 751035 1 A T scaffold13682 Both SNP 0031.scaffold00123 751134 1 A G scaffold13682 ScafM INDEL 0031.scaffold00123 751192 4 .... TATA scaffold13682 ScafM SNP 0031.scaffold00123 751215 1 G C scaffold13682 ScafM SNP 0031.scaffold00123 751231 1 G C scaffold13682 ScafM SNP 0031.scaffold00123 751233 1 C T scaffold13682 ScafM SNP 0031.scaffold00123 751296 1 T C scaffold13682 Both SNP 0031.scaffold00123 751307 1 T C scaffold13682 Both SNP 0031.scaffold00123 751319 1 C T scaffold13682 Both SNP 0031.scaffold00123 751346 1 C T scaffold13682 Both SNP 0031.scaffold00123 751451 1 A G scaffold13682 Both SNP 0031.scaffold00123 751455 1 G A scaffold13682 Both SNP 0031.scaffold00123 751462 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 751501 1 C T scaffold13682 ScafM SNP 0031.scaffold00123 751506 1 T C scaffold13682 Both SNP 0031.scaffold00123 751541 1 G C scaffold13682 Both SNP 0031.scaffold00123 751573 1 T C scaffold13682 Both SNP 0031.scaffold00123 751631 1 G A scaffold13682 ReadM SNP 0031.scaffold00123 751650 1 G C - ReadM SNP 0031.scaffold00123 751793 1 G C - ReadM SNP 0031.scaffold00123 751854 1 T C - ReadM SNP 0031.scaffold00123 751898 1 A C - ReadM SNP 0031.scaffold00123 751933 1 G A - ReadM SNP 0031.scaffold00123 752126 1 C T - ReadM SNP 0031.scaffold00123 752246 1 C A - ReadM SNP 0031.scaffold00123 752298 1 C T - ReadM SNP 0031.scaffold00123 752386 1 T G - ReadM SNP 0031.scaffold00123 752425 1 T A - ReadM SNP 0031.scaffold00123 756022 1 G A - ReadM SNP 0031.scaffold00123 756050 1 T C - ReadM SNP 0031.scaffold00123 756102 1 G T - ReadM SNP 0031.scaffold00123 756219 1 C T - ReadM SNP 0031.scaffold00123 756295 1 A T - ReadM SNP 0031.scaffold00123 756302 1 A G - ReadM SNP 0031.scaffold00123 756351 1 G A - ReadM SNP 0031.scaffold00123 756503 1 T G - ReadM SNP 0031.scaffold00123 756593 1 T A - ReadM SNP 0031.scaffold00123 756629 1 G A - ReadM SNP 0031.scaffold00123 756700 1 C T - ReadM SNP 0031.scaffold00123 756810 1 A C - ReadM SNP 0031.scaffold00123 756929 1 G A - ReadM SNP 0031.scaffold00123 757024 1 T C - ReadM SNP 0031.scaffold00123 757100 1 C A - ReadM SNP 0031.scaffold00123 757185 1 G T - ReadM SNP 0031.scaffold00123 757300 1 G A - ReadM SNP 0031.scaffold00123 757475 1 G A - ReadM SNP 0031.scaffold00123 757515 1 C T - ScafM SNP 0031.scaffold00123 757615 1 T A scaffold13682 ScafM SNP 0031.scaffold00123 757619 1 C T scaffold13682 Both SNP 0031.scaffold00123 757640 1 T C scaffold13682 Both SNP 0031.scaffold00123 757661 1 C A scaffold13682 ReadM SNP 0031.scaffold00123 757737 1 C T - ReadM SNP 0031.scaffold00123 757741 1 A C - ReadM SNP 0031.scaffold00123 757768 1 A C - ReadM SNP 0031.scaffold00123 757839 1 T G - ReadM SNP 0031.scaffold00123 757895 1 G T - ReadM SNP 0031.scaffold00123 757931 1 G A - ReadM SNP 0031.scaffold00123 757956 1 C T - ReadM SNP 0031.scaffold00123 758002 1 T C - ReadM SNP 0031.scaffold00123 758261 1 C T - ReadM SNP 0031.scaffold00123 758287 1 A G - ReadM SNP 0031.scaffold00123 758589 1 T C - ReadM INDEL 0031.scaffold00123 759867 1 A . - ReadM SNP 0031.scaffold00123 760662 1 A T - ReadM SNP 0031.scaffold00123 760682 1 A C - ReadM SNP 0031.scaffold00123 760712 1 G T - ReadM SNP 0031.scaffold00123 760747 1 A T - ReadM SNP 0031.scaffold00123 760783 1 G C - ReadM SNP 0031.scaffold00123 760843 1 G A - ReadM SNP 0031.scaffold00123 760935 1 T A - Both SNP 0031.scaffold00123 761233 1 C A scaffold13682 Both SNP 0031.scaffold00123 761306 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 761368 1 C T scaffold13682 ScafM SNP 0031.scaffold00123 761497 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 761521 1 G A scaffold13682 ScafM SNP 0031.scaffold00123 761600 1 G A scaffold13682 ScafM SNP 0031.scaffold00123 761622 1 G T scaffold13682 ScafM INDEL 0031.scaffold00123 761716 1 T . scaffold13682 ScafM SNP 0031.scaffold00123 761759 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 764610 1 T G scaffold3179 ScafM SNP 0031.scaffold00123 764612 1 T C scaffold3179 ScafM SNP 0031.scaffold00123 764623 1 G A scaffold3179 ScafM SNP 0031.scaffold00123 764664 1 A G scaffold3179 ScafM INDEL 0031.scaffold00123 764723 2 TG .. scaffold3179 Both SNP 0031.scaffold00123 771473 1 T A scaffold13682 Both SNP 0031.scaffold00123 771486 1 C T scaffold13682 Both SNP 0031.scaffold00123 771587 1 C T scaffold13682 Both SNP 0031.scaffold00123 771651 1 A C scaffold13682 ScafM SNP 0031.scaffold00123 771690 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 771726 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 771748 1 T G scaffold13682 ScafM SNP 0031.scaffold00123 771754 1 C G scaffold13682 ScafM SNP 0031.scaffold00123 771760 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 771783 1 A C scaffold13682 ScafM INDEL 0031.scaffold00123 771810 3 ... ATA scaffold13682 ScafM SNP 0031.scaffold00123 771820 1 T C scaffold13682 ReadM SNP 0031.scaffold00123 772235 1 C T - ReadM SNP 0031.scaffold00123 772241 1 G A - ReadM SNP 0031.scaffold00123 772283 1 A G - ReadM SNP 0031.scaffold00123 772336 1 T C - ReadM SNP 0031.scaffold00123 772346 1 C G - ReadM SNP 0031.scaffold00123 772394 1 T G - ReadM SNP 0031.scaffold00123 772476 1 C T - ReadM SNP 0031.scaffold00123 772533 1 T C - ReadM SNP 0031.scaffold00123 772578 1 T G - ReadM SNP 0031.scaffold00123 772607 1 A T - ReadM SNP 0031.scaffold00123 772716 1 G T - ReadM SNP 0031.scaffold00123 772797 1 T C - ReadM SNP 0031.scaffold00123 772818 1 C T - ReadM SNP 0031.scaffold00123 772881 1 T C - ReadM SNP 0031.scaffold00123 773041 1 C T - ReadM SNP 0031.scaffold00123 773067 1 A T - ReadM SNP 0031.scaffold00123 773247 1 C T - ReadM INDEL 0031.scaffold00123 773295 1 A . - ScafM SNP 0031.scaffold00123 773326 1 C A scaffold13682 ScafM SNP 0031.scaffold00123 773328 1 A G scaffold13682 ScafM INDEL 0031.scaffold00123 773353 1 . T scaffold13682 ScafM SNP 0031.scaffold00123 773379 1 A G scaffold13682 ScafM SNP 0031.scaffold00123 773401 2 CT TC scaffold13682 ScafM SNP 0031.scaffold00123 773410 1 A C scaffold13682 ScafM SNP 0031.scaffold00123 773421 1 C G scaffold13682 ScafM SNP 0031.scaffold00123 773425 1 T C scaffold13682 ScafM SNP 0031.scaffold00123 773486 1 C T scaffold13682 ReadM SNP 0031.scaffold00123 773667 1 T G - ReadM SNP 0031.scaffold00123 773679 1 C T - ReadM SNP 0031.scaffold00123 774031 1 C T - ReadM SNP 0031.scaffold00123 774079 1 T C - ReadM SNP 0031.scaffold00123 774084 1 G C - ReadM SNP 0031.scaffold00123 774200 1 C T - ReadM SNP 0031.scaffold00123 774221 1 A C - ReadM SNP 0031.scaffold00123 774299 1 T G - ReadM SNP 0031.scaffold00123 775331 1 G A - ReadM SNP 0031.scaffold00123 775351 1 C T - ReadM SNP 0031.scaffold00123 775589 1 C A - ReadM SNP 0031.scaffold00123 775633 1 T C - ReadM INDEL 0031.scaffold00123 775660 1 T . - ReadM SNP 0031.scaffold00123 775740 1 T A - ReadM SNP 0031.scaffold00123 775778 1 A G - ReadM SNP 0031.scaffold00123 775798 1 C G - ReadM SNP 0031.scaffold00123 776080 1 A G - ReadM SNP 0031.scaffold00123 776103 1 G T - ReadM SNP 0031.scaffold00123 776129 1 T C - ReadM INDEL 0031.scaffold00123 776226 1 G . - ReadM SNP 0031.scaffold00123 776245 1 T A - ReadM SNP 0031.scaffold00123 776277 1 A T - ReadM SNP 0031.scaffold00123 776338 1 T A - ReadM SNP 0031.scaffold00123 776556 1 C T - Both SNP 0031.scaffold00123 776572 1 C T scaffold13682 ReadM SNP 0031.scaffold00123 776639 1 G A - ScafM INDEL 0031.scaffold00123 776693 3 ... TTA scaffold13682 ScafM SNP 0031.scaffold00123 776740 1 C G scaffold13682 ScafM SNP 0031.scaffold00123 776776 1 A G scaffold13682 ReadM SNP 0031.scaffold00123 777575 1 T C - ReadM SNP 0031.scaffold00123 777642 1 G T - ReadM SNP 0031.scaffold00123 777682 1 G A - ReadM SNP 0031.scaffold00123 777742 1 G A - ReadM SNP 0031.scaffold00123 777804 1 T C - ReadM SNP 0031.scaffold00123 777818 1 T C - ReadM SNP 0031.scaffold00123 778036 1 T C - ReadM SNP 0031.scaffold00123 778040 1 T G - ReadM SNP 0031.scaffold00123 778090 1 T C - Both SNP 0031.scaffold00123 778333 1 A C scaffold13682 ReadM SNP 0031.scaffold00123 778430 1 C A - ReadM SNP 0031.scaffold00123 778438 1 T C - ReadM SNP 0031.scaffold00123 778464 1 C T - ReadM SNP 0031.scaffold00123 778567 1 T C - Both SNP 0031.scaffold00123 778648 1 G A scaffold13682 ReadM SNP 0031.scaffold00123 778737 1 T C - ReadM SNP 0031.scaffold00123 778746 1 G T - ReadM SNP 0031.scaffold00123 778964 1 C G - ReadM SNP 0031.scaffold00123 778996 1 G A - ReadM INDEL 0031.scaffold00123 780037 1 . A - ScafM SNP 0031.scaffold00123 780281 1 T C scaffold907 ScafM SNP 0031.scaffold00123 780313 1 C T scaffold907 ScafM SNP 0031.scaffold00123 780318 1 G C scaffold907 ScafM INDEL 0031.scaffold00123 780331 1 A . scaffold907 ScafM SNP 0031.scaffold00123 780377 1 A G scaffold907 ScafM SNP 0031.scaffold00123 780386 1 T C scaffold907 ScafM SNP 0031.scaffold00123 780395 1 G C scaffold907 ScafM SNP 0031.scaffold00123 780433 1 G A scaffold907 ScafM SNP 0031.scaffold00123 780439 1 G A scaffold907 ScafM SNP 0031.scaffold00123 780469 1 A G scaffold907 ScafM SNP 0031.scaffold00123 780473 1 A G scaffold907 ScafM SNP 0031.scaffold00123 780485 1 C T scaffold907 ScafM SNP 0031.scaffold00123 780500 1 G A scaffold907 Both SNP 0031.scaffold00123 780546 1 G T scaffold907 Both SNP 0031.scaffold00123 780548 1 A T scaffold907 ReadM SNP 0031.scaffold00123 780619 1 T C - ReadM SNP 0031.scaffold00123 780628 1 G T - ReadM SNP 0031.scaffold00123 780667 1 A G - Both SNP 0031.scaffold00123 780771 1 A C scaffold907 ReadM SNP 0031.scaffold00123 780888 1 T C - ReadM SNP 0031.scaffold00123 780935 1 G T - ReadM SNP 0031.scaffold00123 780988 2 CG TA - ReadM SNP 0031.scaffold00123 781074 1 T C - ReadM SNP 0031.scaffold00123 781126 1 G A - ReadM SNP 0031.scaffold00123 781130 1 A G - ScafM SNP 0031.scaffold00123 781140 1 G C scaffold907 ScafM SNP 0031.scaffold00123 781148 2 AA GG scaffold907 ScafM SNP 0031.scaffold00123 781153 1 C T scaffold907 ScafM SNP 0031.scaffold00123 781155 1 C T scaffold907 ScafM SNP 0031.scaffold00123 781179 2 CA AG scaffold907 ScafM SNP 0031.scaffold00123 781183 1 G T scaffold907 ScafM INDEL 0031.scaffold00123 781190 1 C . scaffold907 ScafM SNP 0031.scaffold00123 781192 1 G A scaffold907 ScafM SNP 0031.scaffold00123 781226 1 A G scaffold907 ScafM SNP 0031.scaffold00123 781234 1 T A scaffold907 ScafM SNP 0031.scaffold00123 781238 1 A C scaffold907 ScafM SNP 0031.scaffold00123 781240 1 T G scaffold907 ScafM SNP 0031.scaffold00123 781244 1 A T scaffold907 ScafM INDEL 0031.scaffold00123 781265 3 ATT ... scaffold907 ReadM SNP 0031.scaffold00123 781267 1 T A - ReadM SNP 0031.scaffold00123 781274 1 T A - ScafM SNP 0031.scaffold00123 781298 1 G A scaffold907 ReadM INDEL 0031.scaffold00123 781335 1 . C - ScafM INDEL 0031.scaffold00123 781335 21 ..................... CATATATGTATCGTGCACCAC scaffold907 ReadM SNP 0031.scaffold00123 781388 1 C A - ScafM SNP 0031.scaffold00123 781390 1 T G scaffold907 ScafM SNP 0031.scaffold00123 781399 1 T C scaffold907 ScafM SNP 0031.scaffold00123 781411 1 T C scaffold907 ScafM INDEL 0031.scaffold00123 781476 8 AATTAGGC ........ scaffold907 Both SNP 0031.scaffold00123 781505 1 T C scaffold907 Both SNP 0031.scaffold00123 781611 1 C T scaffold907 Both INDEL 0031.scaffold00123 781646 1 . A scaffold907 Both SNP 0031.scaffold00123 781735 1 G T scaffold907 ScafM SNP 0031.scaffold00123 781852 1 A G scaffold907 Both SNP 0031.scaffold00123 781969 1 A G scaffold907 Both SNP 0031.scaffold00123 782062 1 A G scaffold907 ScafM SNP 0031.scaffold00123 782121 1 T C scaffold907 ReadM SNP 0031.scaffold00123 782145 1 A T - ReadM SNP 0031.scaffold00123 782187 1 C A - ReadM SNP 0031.scaffold00123 782207 1 T C - ReadM SNP 0031.scaffold00123 782279 1 G T - ReadM SNP 0031.scaffold00123 782286 1 T C - ReadM SNP 0031.scaffold00123 782299 1 T C - ReadM SNP 0031.scaffold00123 782350 1 A C - ReadM SNP 0031.scaffold00123 782370 1 A G - ReadM SNP 0031.scaffold00123 782388 1 T C - ReadM SNP 0031.scaffold00123 782436 1 T C - ReadM SNP 0031.scaffold00123 782453 1 A G - ReadM SNP 0031.scaffold00123 782480 1 G A - ReadM SNP 0031.scaffold00123 782489 1 T A - ReadM SNP 0031.scaffold00123 782585 1 T G - ReadM SNP 0031.scaffold00123 782681 1 A C - ReadM SNP 0031.scaffold00123 782721 1 T A - ReadM SNP 0031.scaffold00123 782828 1 G A - ReadM SNP 0031.scaffold00123 782856 1 C G - ReadM SNP 0031.scaffold00123 782968 1 C T - ReadM INDEL 0031.scaffold00123 782976 1 T . - ReadM SNP 0031.scaffold00123 783007 1 G T - ReadM INDEL 0031.scaffold00123 783080 1 . G - ReadM SNP 0031.scaffold00123 783161 1 T C - ReadM SNP 0031.scaffold00123 783193 1 T C - ReadM SNP 0031.scaffold00123 783204 1 G A - ReadM SNP 0031.scaffold00123 783231 1 A G - ReadM SNP 0031.scaffold00123 783252 1 T C - ReadM SNP 0031.scaffold00123 783323 1 T C - ReadM SNP 0031.scaffold00123 783343 1 A G - ReadM SNP 0031.scaffold00123 783374 1 C T - ReadM SNP 0031.scaffold00123 783554 1 C T - ReadM SNP 0031.scaffold00123 783583 1 G T - ReadM SNP 0031.scaffold00123 783612 1 A G - ReadM SNP 0031.scaffold00123 783855 1 C A - ReadM SNP 0031.scaffold00123 783906 1 A C - ReadM SNP 0031.scaffold00123 784102 1 T C - ReadM INDEL 0031.scaffold00123 784133 1 T . - ReadM SNP 0031.scaffold00123 784213 1 G T - ReadM SNP 0031.scaffold00123 784220 1 C T - ReadM INDEL 0031.scaffold00123 784263 1 . T - ReadM SNP 0031.scaffold00123 784356 1 C T - ScafM SNP 0031.scaffold00123 784621 1 T C scaffold907 ScafM SNP 0031.scaffold00123 784626 1 A C scaffold907 ScafM SNP 0031.scaffold00123 784635 1 A G scaffold907 ScafM SNP 0031.scaffold00123 784655 2 CG GA scaffold907 ScafM SNP 0031.scaffold00123 784659 1 C T scaffold907 ScafM SNP 0031.scaffold00123 784661 1 A G scaffold907 ScafM SNP 0031.scaffold00123 784672 1 T C scaffold907 ScafM SNP 0031.scaffold00123 784685 1 C T scaffold907 Both SNP 0031.scaffold00123 784709 1 G A scaffold907 Both INDEL 0031.scaffold00123 784723 1 . T scaffold907 Both SNP 0031.scaffold00123 784751 1 C A scaffold907 ScafM SNP 0031.scaffold00123 784938 1 T G scaffold907 ScafM INDEL 0031.scaffold00123 785027 6 ...... AGTTGT scaffold907 ScafM INDEL 0031.scaffold00123 785028 1 . A scaffold907 ScafM SNP 0031.scaffold00123 785041 1 G A scaffold907 ScafM SNP 0031.scaffold00123 785056 1 A G scaffold907 ScafM SNP 0031.scaffold00123 785068 1 T C scaffold907 ScafM SNP 0031.scaffold00123 785142 1 C T scaffold907 ScafM SNP 0031.scaffold00123 785195 1 T A scaffold907 ScafM SNP 0031.scaffold00123 785203 1 C A scaffold907 ScafM SNP 0031.scaffold00123 785227 1 T C scaffold907 ScafM SNP 0031.scaffold00123 785231 1 T A scaffold907 ScafM INDEL 0031.scaffold00123 785242 1 . A scaffold907 ScafM INDEL 0031.scaffold00123 785276 8 ........ AATGAGTA scaffold907 ScafM SNP 0031.scaffold00123 785285 1 A G scaffold907 Both SNP 0031.scaffold00123 785531 1 C T scaffold907 Both SNP 0031.scaffold00123 785567 1 G A scaffold907 Both SNP 0031.scaffold00123 785822 1 C T scaffold907 ScafM SNP 0031.scaffold00123 786154 1 C T scaffold907 ScafM INDEL 0031.scaffold00123 786181 8 GCCCTTAA ........ scaffold907 ScafM SNP 0031.scaffold00123 786195 1 G A scaffold907 ScafM SNP 0031.scaffold00123 786213 1 A G scaffold907 ScafM INDEL 0031.scaffold00123 786222 1 A . scaffold907 ScafM INDEL 0031.scaffold00123 786237 3 TAT ... scaffold907 Both SNP 0031.scaffold00123 786275 1 C T scaffold907 ScafM SNP 0031.scaffold00123 786373 1 G T scaffold907 ScafM SNP 0031.scaffold00123 786379 2 CG TC scaffold907 ScafM SNP 0031.scaffold00123 786676 1 C G scaffold907 ScafM SNP 0031.scaffold00123 786692 2 TC CA scaffold907 ScafM SNP 0031.scaffold00123 786887 1 A T scaffold907 ScafM SNP 0031.scaffold00123 786893 2 TC CT scaffold907 ScafM INDEL 0031.scaffold00123 786919 7 ....... AACTAGC scaffold907 ScafM SNP 0031.scaffold00123 786940 1 A G scaffold907 Both SNP 0031.scaffold00123 787239 1 T C scaffold907 ReadM SNP 0031.scaffold00123 787718 1 T C - ReadM SNP 0031.scaffold00123 787741 1 C G - Both SNP 0031.scaffold00123 787871 1 G A scaffold907 Both SNP 0031.scaffold00123 787883 1 G T scaffold907 Both SNP 0031.scaffold00123 787929 1 T G scaffold907 ScafM SNP 0031.scaffold00123 787970 1 C T scaffold907 ScafM SNP 0031.scaffold00123 788012 1 T A scaffold907 ScafM INDEL 0031.scaffold00123 788016 2 TT .. scaffold907 ScafM SNP 0031.scaffold00123 788026 1 C T scaffold907 ScafM SNP 0031.scaffold00123 788030 1 C A scaffold907 ScafM SNP 0031.scaffold00123 788041 1 G A scaffold907 Both SNP 0031.scaffold00123 788091 1 T C scaffold907 ScafM SNP 0031.scaffold00123 788199 1 C A scaffold907 ScafM SNP 0031.scaffold00123 788215 1 A G scaffold907 ScafM SNP 0031.scaffold00123 788236 1 T A scaffold907 ScafM SNP 0031.scaffold00123 788256 2 AA CG scaffold907 ScafM SNP 0031.scaffold00123 788263 1 C T scaffold907 ScafM SNP 0031.scaffold00123 788342 1 C T scaffold907 ScafM SNP 0031.scaffold00123 788354 1 G A scaffold907 ScafM SNP 0031.scaffold00123 788356 1 T G scaffold907 ScafM INDEL 0031.scaffold00123 788367 3 ... TTA scaffold907 Both SNP 0031.scaffold00123 788572 1 G A scaffold907 ReadM SNP 0031.scaffold00123 788604 1 A G - ReadM SNP 0031.scaffold00123 788614 1 T A - Both SNP 0031.scaffold00123 789327 1 T A scaffold907 Both SNP 0031.scaffold00123 789339 1 A G scaffold907 Both SNP 0031.scaffold00123 789477 1 C T scaffold907 Both SNP 0031.scaffold00123 789522 1 G A scaffold907 Both SNP 0031.scaffold00123 789617 1 A G scaffold907 Both SNP 0031.scaffold00123 789633 1 C A scaffold907 Both SNP 0031.scaffold00123 789789 1 A G scaffold907 Both SNP 0031.scaffold00123 790080 1 T C scaffold907 Both SNP 0031.scaffold00123 790136 1 C T scaffold907 Both SNP 0031.scaffold00123 790155 1 A C scaffold907 Both SNP 0031.scaffold00123 790332 1 A T scaffold907 Both SNP 0031.scaffold00123 790720 1 C T scaffold907 ScafM SNP 0031.scaffold00123 791033 1 C G scaffold907 ReadM SNP 0031.scaffold00123 793639 1 A T - ReadM SNP 0031.scaffold00123 793745 1 T C - ReadM SNP 0031.scaffold00123 793784 1 T C - Both INDEL 0031.scaffold00123 794055 1 A . scaffold907 ScafM SNP 0031.scaffold00123 794382 1 T A scaffold907 ScafM SNP 0031.scaffold00123 794873 1 G A scaffold907 ScafM INDEL 0031.scaffold00123 795116 1 . T scaffold907 ScafM SNP 0031.scaffold00123 796308 1 G A scaffold907 ScafM INDEL 0031.scaffold00123 796498 1 T . scaffold907 ScafM SNP 0031.scaffold00123 796640 1 G A scaffold907 ScafM SNP 0031.scaffold00123 796672 1 T C scaffold907 ScafM INDEL 0031.scaffold00123 796743 1 . A scaffold907 ScafM INDEL 0031.scaffold00123 796807 28 ............................ TGGAAAATATATGAATCTATATTATATA scaffold907 ReadM SNP 0031.scaffold00123 797537 1 A T - ReadM SNP 0031.scaffold00123 797702 1 C T - ReadM SNP 0031.scaffold00123 797943 1 G A - ReadM SNP 0031.scaffold00123 798053 1 C G - ReadM SNP 0031.scaffold00123 798314 1 A G - ReadM SNP 0031.scaffold00123 798632 1 A G - Both INDEL 0031.scaffold00123 799060 1 T . scaffold907 Both SNP 0031.scaffold00123 799308 1 G A scaffold907 Both SNP 0031.scaffold00123 799413 1 A G scaffold907 ReadM SNP 0031.scaffold00123 799668 1 T A - ReadM SNP 0031.scaffold00123 799784 1 T C - ReadM SNP 0031.scaffold00123 800123 1 A G - ReadM SNP 0031.scaffold00123 800475 1 C T - ReadM SNP 0031.scaffold00123 800706 1 A C - ReadM SNP 0031.scaffold00123 800849 1 C T - ReadM SNP 0031.scaffold00123 801433 1 G A - ReadM SNP 0031.scaffold00123 801509 1 T C - Both SNP 0031.scaffold00123 801948 1 T C scaffold907 ScafM SNP 0031.scaffold00123 801960 1 T A scaffold907 ScafM SNP 0031.scaffold00123 802120 1 A G scaffold907 ScafM INDEL 0031.scaffold00123 802122 4 AAAG .... scaffold907 ScafM SNP 0031.scaffold00123 802272 1 A T scaffold907 ScafM INDEL 0031.scaffold00123 802877 1 . T scaffold907 ReadM SNP 0031.scaffold00123 803358 1 A T - ReadM SNP 0031.scaffold00123 803902 1 C A - ReadM SNP 0031.scaffold00123 803972 1 T A - ReadM SNP 0031.scaffold00123 804002 1 A G - ReadM INDEL 0031.scaffold00123 804098 1 . A - ReadM SNP 0031.scaffold00123 804113 1 A G - ReadM SNP 0031.scaffold00123 806743 1 T C - ReadM SNP 0031.scaffold00123 806991 1 C T - ReadM SNP 0031.scaffold00123 807525 1 T C - ReadM SNP 0031.scaffold00123 807876 1 C G - ReadM SNP 0031.scaffold00123 807879 1 G A - ReadM SNP 0031.scaffold00123 808202 1 T A - ReadM INDEL 0031.scaffold00123 808588 1 T . - ReadM SNP 0031.scaffold00123 808610 1 C G - ReadM SNP 0031.scaffold00123 808700 1 A C - ReadM SNP 0031.scaffold00123 808942 1 T C - ReadM SNP 0031.scaffold00123 809026 1 G C - Both SNP 0031.scaffold00123 809165 1 C T scaffold907 ReadM SNP 0031.scaffold00123 809435 1 G A - ReadM INDEL 0031.scaffold00123 809630 1 . T - ScafM INDEL 0031.scaffold00123 809733 1 . A scaffold907 ScafM INDEL 0031.scaffold00123 810130 1 . A scaffold907 ScafM SNP 0031.scaffold00123 810412 1 C T scaffold10954 ScafM INDEL 0031.scaffold00123 810417 1 T . scaffold10954 ScafM SNP 0031.scaffold00123 810419 1 G A scaffold10954 ScafM SNP 0031.scaffold00123 810423 1 G A scaffold10954 ScafM SNP 0031.scaffold00123 810445 1 T G scaffold10954 ScafM SNP 0031.scaffold00123 810488 1 G A scaffold10954 ReadM SNP 0031.scaffold00123 810593 1 A G - ReadM SNP 0031.scaffold00123 811132 1 T C - ReadM SNP 0031.scaffold00123 811424 1 A G - ReadM SNP 0031.scaffold00123 811730 1 A G - ReadM SNP 0031.scaffold00123 812031 1 C A - ReadM SNP 0031.scaffold00123 812976 1 A G - ReadM SNP 0031.scaffold00123 813072 1 A C - ReadM SNP 0031.scaffold00123 813521 1 G C - ReadM SNP 0031.scaffold00123 813585 1 G A - ReadM SNP 0031.scaffold00123 813733 1 C G - ReadM INDEL 0031.scaffold00123 813794 1 A . - ReadM SNP 0031.scaffold00123 813809 1 T G - ReadM SNP 0031.scaffold00123 813847 1 G A - ReadM SNP 0031.scaffold00123 813901 1 C T - ReadM SNP 0031.scaffold00123 813946 1 C T - ReadM SNP 0031.scaffold00123 813951 1 T G - ReadM SNP 0031.scaffold00123 814168 1 A G - ReadM SNP 0031.scaffold00123 814172 1 T A - ReadM SNP 0031.scaffold00123 814323 1 A G - ReadM SNP 0031.scaffold00123 814371 1 C A - ReadM SNP 0031.scaffold00123 814508 1 G A - ReadM SNP 0031.scaffold00123 814764 1 A G - ReadM SNP 0031.scaffold00123 814771 1 A C - ReadM SNP 0031.scaffold00123 814856 1 G A - ReadM SNP 0031.scaffold00123 814940 1 C A - ReadM SNP 0031.scaffold00123 815023 1 A G - ReadM SNP 0031.scaffold00123 815131 1 A C - ReadM SNP 0031.scaffold00123 815215 1 T C - ReadM INDEL 0031.scaffold00123 815229 2 AT .. - ReadM SNP 0031.scaffold00123 815282 1 T C - ReadM SNP 0031.scaffold00123 815803 1 T C - ReadM SNP 0031.scaffold00123 815953 1 G A - ReadM SNP 0031.scaffold00123 816116 1 C T - ReadM SNP 0031.scaffold00123 816197 1 T A - ReadM SNP 0031.scaffold00123 816210 1 A C - ReadM SNP 0031.scaffold00123 816270 1 A G - ReadM SNP 0031.scaffold00123 816339 1 A T - ReadM SNP 0031.scaffold00123 816556 1 G A - ReadM SNP 0031.scaffold00123 816645 1 C T - ReadM SNP 0031.scaffold00123 816795 1 T C - ReadM SNP 0031.scaffold00123 817049 1 A G - ReadM SNP 0031.scaffold00123 817191 1 A G - ReadM SNP 0031.scaffold00123 817339 1 A G - ReadM SNP 0031.scaffold00123 817376 1 G A - ReadM SNP 0031.scaffold00123 817442 1 G A - ReadM SNP 0031.scaffold00123 817536 1 G A - Both SNP 0031.scaffold00123 817683 1 T G scaffold907 Both SNP 0031.scaffold00123 817727 1 T C scaffold907 Both SNP 0031.scaffold00123 817738 1 A G scaffold907 Both SNP 0031.scaffold00123 817913 1 C G scaffold907 Both SNP 0031.scaffold00123 817937 1 A G scaffold907 ReadM SNP 0031.scaffold00123 818007 1 G A - ReadM SNP 0031.scaffold00123 818020 1 T C - ReadM SNP 0031.scaffold00123 818063 1 A G - ReadM SNP 0031.scaffold00123 818127 1 G A - ReadM SNP 0031.scaffold00123 818146 1 A T - Both SNP 0031.scaffold00123 819865 1 C T scaffold907 ScafM SNP 0031.scaffold00123 819900 1 T A scaffold907 ScafM SNP 0031.scaffold00123 820143 1 G C scaffold907 ScafM SNP 0031.scaffold00123 820207 1 T A scaffold907 ScafM SNP 0031.scaffold00123 820324 1 A G scaffold907 ScafM SNP 0031.scaffold00123 820633 1 G A scaffold907 ReadM SNP 0031.scaffold00123 821099 1 T C - ReadM SNP 0031.scaffold00123 821183 1 G T - Both INDEL 0031.scaffold00123 821262 2 AT .. scaffold907 Both SNP 0031.scaffold00123 821549 1 G T scaffold907 Both SNP 0031.scaffold00123 821586 1 A T scaffold907 ReadM SNP 0031.scaffold00123 821732 1 A G - ReadM SNP 0031.scaffold00123 822670 1 C A - ReadM SNP 0031.scaffold00123 822804 1 A G - ReadM SNP 0031.scaffold00123 822901 1 T A - ReadM SNP 0031.scaffold00123 822906 1 A G - Both SNP 0031.scaffold00123 823340 1 C A scaffold907 ScafM INDEL 0031.scaffold00123 823483 3 ... AAA scaffold907 Both SNP 0031.scaffold00123 824077 1 C A scaffold907 Both SNP 0031.scaffold00123 824129 1 T C scaffold907 ReadM SNP 0031.scaffold00123 824594 1 T C - ReadM SNP 0031.scaffold00123 824664 1 A G - ReadM SNP 0031.scaffold00123 824739 1 A G - ReadM SNP 0031.scaffold00123 824802 1 G A - ReadM INDEL 0031.scaffold00123 825050 1 . A - ScafM SNP 0031.scaffold00123 825287 1 G A scaffold907 Both SNP 0031.scaffold00123 825408 1 C T scaffold907 Both SNP 0031.scaffold00123 825595 1 G A scaffold907 ReadM INDEL 0031.scaffold00123 825602 2 .. GA - ReadM SNP 0031.scaffold00123 825721 1 A C - ReadM SNP 0031.scaffold00123 826023 1 A G - ReadM SNP 0031.scaffold00123 826176 1 T A - ReadM SNP 0031.scaffold00123 826286 1 A T - ReadM SNP 0031.scaffold00123 826326 1 T A - ReadM SNP 0031.scaffold00123 826375 1 C T - ReadM SNP 0031.scaffold00123 826662 1 G T - ReadM SNP 0031.scaffold00123 826780 1 T C - ReadM SNP 0031.scaffold00123 827314 1 A G - ReadM SNP 0031.scaffold00123 827570 1 C T - ReadM SNP 0031.scaffold00123 829891 1 G A - Both SNP 0031.scaffold00123 829996 1 T C scaffold907 ScafM SNP 0031.scaffold00123 830039 1 T C scaffold907 ReadM SNP 0031.scaffold00123 830289 1 A G - ReadM SNP 0031.scaffold00123 830500 1 A T - ReadM SNP 0031.scaffold00123 830641 1 T C - ReadM SNP 0031.scaffold00123 831418 1 C T - ReadM SNP 0031.scaffold00123 831783 2 AA GG - ReadM SNP 0031.scaffold00123 831881 1 C A - Both SNP 0031.scaffold00123 832025 1 A G scaffold907 Both SNP 0031.scaffold00123 832094 1 G A scaffold907 Both SNP 0031.scaffold00123 832555 1 A G scaffold907 Both SNP 0031.scaffold00123 832576 1 A G scaffold907 Both SNP 0031.scaffold00123 832614 1 T C scaffold907 Both SNP 0031.scaffold00123 833521 1 G A scaffold907 Both SNP 0031.scaffold00123 833630 1 A G scaffold907 Both SNP 0031.scaffold00123 834552 1 G A scaffold907 ScafM INDEL 0031.scaffold00123 834609 1 . T scaffold907 ReadM INDEL 0031.scaffold00123 834675 1 . A - ScafM INDEL 0031.scaffold00123 834675 3 .TT AAA scaffold907 ReadM SNP 0031.scaffold00123 834746 1 C T - ReadM SNP 0031.scaffold00123 834838 1 T G - Both SNP 0031.scaffold00123 834920 1 G T scaffold907 Both SNP 0031.scaffold00123 834999 1 A T scaffold907 ReadM SNP 0031.scaffold00123 835064 1 G C - Both SNP 0031.scaffold00123 835214 1 G C scaffold907 Both SNP 0031.scaffold00123 835390 1 C T scaffold907 Both SNP 0031.scaffold00123 835870 1 G A scaffold907 Both SNP 0031.scaffold00123 835952 1 T C scaffold907 Both SNP 0031.scaffold00123 835961 1 G A scaffold907 Both SNP 0031.scaffold00123 835978 1 A G scaffold907 ReadM SNP 0031.scaffold00123 836070 1 C T - ReadM SNP 0031.scaffold00123 836231 1 T G - Both SNP 0031.scaffold00123 836337 1 C A scaffold907 Both SNP 0031.scaffold00123 836399 1 A G scaffold907 Both SNP 0031.scaffold00123 836781 1 A C scaffold907 Both SNP 0031.scaffold00123 836855 1 C T scaffold907 Both SNP 0031.scaffold00123 836903 1 G A scaffold907 Both SNP 0031.scaffold00123 836942 1 A G scaffold907 Both SNP 0031.scaffold00123 837074 1 G A scaffold907 Both SNP 0031.scaffold00123 837182 1 C A scaffold907 Both SNP 0031.scaffold00123 837404 1 A G scaffold907 Both SNP 0031.scaffold00123 837591 1 G A scaffold907 Both SNP 0031.scaffold00123 837613 1 T C scaffold907 Both SNP 0031.scaffold00123 837670 1 G A scaffold907 ReadM SNP 0031.scaffold00123 837822 1 G A - ReadM SNP 0031.scaffold00123 837920 1 T G - ReadM SNP 0031.scaffold00123 837926 1 T A - ReadM INDEL 0031.scaffold00123 838079 1 T . - ReadM SNP 0031.scaffold00123 838220 1 C G - ReadM SNP 0031.scaffold00123 838429 1 T A - ReadM SNP 0031.scaffold00123 838468 1 G A - ReadM INDEL 0031.scaffold00123 838551 1 C . - ReadM INDEL 0031.scaffold00123 838552 1 T . - ReadM SNP 0031.scaffold00123 839587 1 T C - ReadM SNP 0031.scaffold00123 839758 1 G A - ReadM SNP 0031.scaffold00123 839949 1 C T - ReadM SNP 0031.scaffold00123 840031 1 G C - ReadM SNP 0031.scaffold00123 840138 1 T C - ReadM SNP 0031.scaffold00123 840159 1 T A - ReadM SNP 0031.scaffold00123 840276 1 T A - ReadM SNP 0031.scaffold00123 840303 1 T C - ReadM SNP 0031.scaffold00123 840366 1 T A - ReadM SNP 0031.scaffold00123 840629 1 C T - ReadM SNP 0031.scaffold00123 841009 1 G A - Both SNP 0031.scaffold00123 841074 1 T A scaffold907 ReadM INDEL 0031.scaffold00123 841148 1 T . - ReadM SNP 0031.scaffold00123 841158 1 G A - ReadM SNP 0031.scaffold00123 841335 1 A G - ReadM SNP 0031.scaffold00123 841667 1 G A - ScafM SNP 0031.scaffold00123 841998 1 C T scaffold907 ScafM SNP 0031.scaffold00123 842518 1 T C scaffold907 ScafM SNP 0031.scaffold00123 842715 1 C A scaffold907 Both SNP 0031.scaffold00123 842770 1 G A scaffold907 Both SNP 0031.scaffold00123 842804 1 T A scaffold907 ReadM INDEL 0031.scaffold00123 842853 1 A . - Both SNP 0031.scaffold00123 843209 1 A T scaffold907 ReadM SNP 0031.scaffold00123 843324 1 A G - ReadM SNP 0031.scaffold00123 843381 1 T G - ReadM SNP 0031.scaffold00123 843384 1 C T - ReadM SNP 0031.scaffold00123 843854 1 G T - ReadM SNP 0031.scaffold00123 845265 1 A T - ScafM SNP 0031.scaffold00123 848150 1 C T scaffold907 ScafM INDEL 0031.scaffold00123 848155 1 T . scaffold907 ScafM INDEL 0031.scaffold00123 848227 9 ......... TCGTATTTG scaffold907 ReadM SNP 0031.scaffold00123 848386 1 A G - ReadM SNP 0031.scaffold00123 848524 1 T C - ReadM INDEL 0031.scaffold00123 848710 2 TA .. - ReadM SNP 0031.scaffold00123 848755 1 A C - ReadM SNP 0031.scaffold00123 848824 1 A G - ReadM SNP 0031.scaffold00123 848992 1 A T - ReadM SNP 0031.scaffold00123 849278 1 G A - ReadM SNP 0031.scaffold00123 849318 1 G A - ReadM SNP 0031.scaffold00123 849760 1 A G - ReadM SNP 0031.scaffold00123 849812 1 A C - ReadM SNP 0031.scaffold00123 849899 1 C T - ReadM INDEL 0031.scaffold00123 850015 2 TT .. - Both INDEL 0031.scaffold00123 850084 1 . C scaffold907 Both SNP 0031.scaffold00123 850247 1 A G scaffold907 Both SNP 0031.scaffold00123 850321 1 T G scaffold907 ScafM INDEL 0031.scaffold00123 850450 1 . A scaffold907 ScafM INDEL 0031.scaffold00123 850686 2 AA .. scaffold907 Both SNP 0031.scaffold00123 850712 1 C A scaffold907 Both SNP 0031.scaffold00123 850736 1 T C scaffold907 ScafM SNP 0031.scaffold00123 851435 2 AT GA scaffold907 Both SNP 0031.scaffold00123 851484 1 G A scaffold907 Both SNP 0031.scaffold00123 851501 1 T C scaffold907 Both SNP 0031.scaffold00123 851586 1 T G scaffold907 Both SNP 0031.scaffold00123 851628 1 C T scaffold907 Both SNP 0031.scaffold00123 851757 1 G A scaffold907 Both SNP 0031.scaffold00123 851862 1 A G scaffold907 Both SNP 0031.scaffold00123 851909 1 T A scaffold907 Both INDEL 0031.scaffold00123 852316 1 . G scaffold907 Both SNP 0031.scaffold00123 852349 1 A G scaffold907 Both SNP 0031.scaffold00123 852397 1 T C scaffold907 ScafM INDEL 0031.scaffold00123 852520 1 . G scaffold907 Both SNP 0031.scaffold00123 852644 1 T C scaffold907 ScafM SNP 0031.scaffold00123 852841 1 G A scaffold907 ReadM SNP 0031.scaffold00123 853509 1 C A - ReadM INDEL 0031.scaffold00123 853672 2 AT .. - ReadM SNP 0031.scaffold00123 853795 1 G C - ReadM SNP 0031.scaffold00123 854979 1 T C - ReadM SNP 0031.scaffold00123 854986 1 A G - ReadM SNP 0031.scaffold00123 855111 1 C T - ReadM SNP 0031.scaffold00123 855202 1 T C - ReadM SNP 0031.scaffold00123 855354 1 T C - ReadM SNP 0031.scaffold00123 856869 1 G A - ReadM SNP 0031.scaffold00123 857111 1 T C - ReadM SNP 0031.scaffold00123 857221 1 C A - ReadM SNP 0031.scaffold00123 857982 1 A G - ReadM INDEL 0031.scaffold00123 858038 1 A . - ReadM SNP 0031.scaffold00123 858248 1 C A - ReadM SNP 0031.scaffold00123 858468 1 C G - ReadM SNP 0031.scaffold00123 858490 1 T A - Both SNP 0031.scaffold00123 858501 1 C T scaffold14537 ReadM SNP 0031.scaffold00123 859054 1 T C - ReadM SNP 0031.scaffold00123 859122 1 A G - ReadM SNP 0031.scaffold00123 859197 1 T C - ReadM SNP 0031.scaffold00123 859305 1 T C - ReadM SNP 0031.scaffold00123 859330 1 C T - ReadM SNP 0031.scaffold00123 859487 1 A C - ReadM SNP 0031.scaffold00123 859580 1 T C - ReadM SNP 0031.scaffold00123 859642 1 G T - ReadM SNP 0031.scaffold00123 859774 1 G T - ReadM SNP 0031.scaffold00123 859991 1 C T - ReadM SNP 0031.scaffold00123 860086 1 T C - ReadM SNP 0031.scaffold00123 860088 1 A C - ReadM SNP 0031.scaffold00123 860574 1 G T - ReadM SNP 0031.scaffold00123 861175 1 A G - ReadM SNP 0031.scaffold00123 861232 1 G A - ReadM SNP 0031.scaffold00123 861259 1 G A - ReadM SNP 0031.scaffold00123 861524 1 C T - ReadM SNP 0031.scaffold00123 862057 1 T A - ReadM SNP 0031.scaffold00123 862069 1 A G - ReadM SNP 0031.scaffold00123 862075 1 A T - ReadM SNP 0031.scaffold00123 862236 1 T C - ReadM SNP 0031.scaffold00123 862276 1 C A - ReadM SNP 0031.scaffold00123 862584 1 G A - ReadM SNP 0031.scaffold00123 862766 1 A G - ReadM SNP 0031.scaffold00123 862855 1 A C - ReadM SNP 0031.scaffold00123 862903 1 T G - ReadM SNP 0031.scaffold00123 862942 1 A C - Both SNP 0031.scaffold00123 862977 1 G C scaffold14537 ReadM SNP 0031.scaffold00123 863409 1 G A - ReadM SNP 0031.scaffold00123 863488 1 T G - ReadM SNP 0031.scaffold00123 863794 1 T C - ReadM SNP 0031.scaffold00123 863834 1 A G - ReadM SNP 0031.scaffold00123 864157 1 C T - Both SNP 0031.scaffold00123 864451 1 C G scaffold14537 Both SNP 0031.scaffold00123 864554 1 A G scaffold14537 Both SNP 0031.scaffold00123 865127 1 C T scaffold14537 Both SNP 0031.scaffold00123 865202 1 C T scaffold14537 ScafM INDEL 0031.scaffold00123 865326 4 .... ATAG scaffold14537 Both SNP 0031.scaffold00123 865770 1 A G scaffold14537 ScafM INDEL 0031.scaffold00123 865892 1 . A scaffold14537 Both SNP 0031.scaffold00123 866048 1 T C scaffold14537 Both SNP 0031.scaffold00123 866215 1 C A scaffold14537 ScafM INDEL 0031.scaffold00123 866331 3 ... TTT scaffold14537 ScafM SNP 0031.scaffold00123 866527 1 A G scaffold14537 ScafM INDEL 0031.scaffold00123 867368 4 .... TAAT scaffold14537 Both SNP 0031.scaffold00123 867572 1 A G scaffold14537 Both SNP 0031.scaffold00123 867677 1 C A scaffold14537 Both SNP 0031.scaffold00123 868243 1 C T scaffold14537 Both SNP 0031.scaffold00123 868494 1 A G scaffold14537 Both SNP 0031.scaffold00123 868697 1 G C scaffold14537 Both SNP 0031.scaffold00123 868828 1 A G scaffold14537 Both SNP 0031.scaffold00123 868877 1 C T scaffold14537 Both SNP 0031.scaffold00123 869320 1 G A scaffold14537 Both SNP 0031.scaffold00123 869364 1 C G scaffold14537 Both SNP 0031.scaffold00123 869513 1 T G scaffold14537 Both SNP 0031.scaffold00123 869589 1 A C scaffold14537 Both SNP 0031.scaffold00123 869744 1 G C scaffold14537 Both SNP 0031.scaffold00123 869748 1 C T scaffold14537 Both SNP 0031.scaffold00123 869957 1 T G scaffold14537 Both SNP 0031.scaffold00123 870145 1 C T scaffold14537 Both SNP 0031.scaffold00123 870185 1 C T scaffold14537 ScafM SNP 0031.scaffold00123 870231 1 C G scaffold14537 ScafM SNP 0031.scaffold00123 870241 1 C A scaffold14537 ScafM SNP 0031.scaffold00123 870244 1 T C scaffold14537 ScafM INDEL 0031.scaffold00123 870289 4 AGCA .... scaffold14537 ScafM SNP 0031.scaffold00123 874629 1 T C scaffold14537 ScafM SNP 0031.scaffold00123 874667 1 A C scaffold14537 ScafM SNP 0031.scaffold00123 874717 1 C T scaffold14537 ScafM SNP 0031.scaffold00123 874745 1 C T scaffold14537 ScafM SNP 0031.scaffold00123 874762 1 C T scaffold14537 ScafM SNP 0031.scaffold00123 874893 1 A G scaffold14537 ReadM SNP 0031.scaffold00123 876196 1 G A - ReadM SNP 0031.scaffold00123 876204 1 A G - ReadM SNP 0031.scaffold00123 876275 1 A G - ReadM SNP 0031.scaffold00123 876277 1 C T - ReadM SNP 0031.scaffold00123 876281 1 T C - ReadM SNP 0031.scaffold00123 876360 1 T G - ReadM SNP 0031.scaffold00123 876705 1 G T - ReadM SNP 0031.scaffold00123 876721 1 A G - ReadM SNP 0031.scaffold00123 876753 1 T C - ReadM SNP 0031.scaffold00123 876760 1 C G - ReadM SNP 0031.scaffold00123 876950 1 A G - ReadM SNP 0031.scaffold00123 876998 1 G C - ReadM SNP 0031.scaffold00123 877006 1 A G - ReadM SNP 0031.scaffold00123 877068 1 C T - ReadM SNP 0031.scaffold00123 877103 1 G A - ReadM SNP 0031.scaffold00123 877172 1 G A - ReadM SNP 0031.scaffold00123 877215 2 CC TA - ReadM SNP 0031.scaffold00123 877237 1 T C - ReadM SNP 0031.scaffold00123 877621 1 A T - ReadM SNP 0031.scaffold00123 877647 1 C T - ReadM SNP 0031.scaffold00123 877677 1 G A - ReadM SNP 0031.scaffold00123 877743 1 T C - ReadM SNP 0031.scaffold00123 877863 1 A T - ReadM SNP 0031.scaffold00123 877902 1 C T - ReadM SNP 0031.scaffold00123 878352 1 C T - ReadM SNP 0031.scaffold00123 878403 1 A G - ReadM SNP 0031.scaffold00123 878456 1 A G - ReadM SNP 0031.scaffold00123 878578 1 G A - ReadM SNP 0031.scaffold00123 878623 1 T C - ReadM SNP 0031.scaffold00123 878699 1 T C - ReadM SNP 0031.scaffold00123 878710 1 G A - ReadM SNP 0031.scaffold00123 878786 1 A G - ReadM SNP 0031.scaffold00123 878892 1 G A - ReadM SNP 0031.scaffold00123 878920 1 G A - ReadM SNP 0031.scaffold00123 878968 1 G T - ReadM SNP 0031.scaffold00123 879149 1 T G - ReadM INDEL 0031.scaffold00123 879176 1 T . - ReadM SNP 0031.scaffold00123 881214 1 T A - ReadM SNP 0031.scaffold00123 881226 1 T A - ReadM SNP 0031.scaffold00123 882495 1 T C - ReadM SNP 0031.scaffold00123 882504 1 C A - ReadM SNP 0031.scaffold00123 882701 1 T C - ReadM SNP 0031.scaffold00123 882779 1 T C - ReadM SNP 0031.scaffold00123 882845 1 A G - ReadM SNP 0031.scaffold00123 882989 1 G A - ReadM SNP 0031.scaffold00123 883233 1 C G - ReadM SNP 0031.scaffold00123 883252 1 C A - ReadM SNP 0031.scaffold00123 883301 1 C T - ReadM SNP 0031.scaffold00123 883353 1 C G - ReadM SNP 0031.scaffold00123 883403 1 A G - ReadM SNP 0031.scaffold00123 883481 1 A G - ReadM SNP 0031.scaffold00123 883544 1 G A - ReadM SNP 0031.scaffold00123 883624 1 A G - ReadM SNP 0031.scaffold00123 883711 1 T C - ReadM SNP 0031.scaffold00123 883849 1 T G - ReadM SNP 0031.scaffold00123 883854 1 G T - ReadM SNP 0031.scaffold00123 883964 1 G A - ReadM SNP 0031.scaffold00123 884007 1 A T - ReadM SNP 0031.scaffold00123 884130 1 G A - ReadM SNP 0031.scaffold00123 884235 1 A G - ReadM SNP 0031.scaffold00123 884254 1 A G - ReadM SNP 0031.scaffold00123 884263 1 G A - ReadM SNP 0031.scaffold00123 884396 1 T C - ReadM SNP 0031.scaffold00123 884423 1 G A - ReadM SNP 0031.scaffold00123 884680 1 A G - ReadM INDEL 0031.scaffold00123 885974 1 T . - ReadM SNP 0031.scaffold00123 886152 1 A T - ReadM SNP 0031.scaffold00123 886266 1 A C - ReadM SNP 0031.scaffold00123 886285 1 T A - ReadM SNP 0031.scaffold00123 886393 1 T A - ReadM SNP 0031.scaffold00123 886398 1 C T - ReadM SNP 0031.scaffold00123 886404 1 T C - ReadM SNP 0031.scaffold00123 886509 1 T A - ReadM SNP 0031.scaffold00123 886595 1 A T - ReadM SNP 0031.scaffold00123 886609 1 T A - ReadM INDEL 0031.scaffold00123 886631 1 . T - ReadM SNP 0031.scaffold00123 886753 1 G A - ReadM SNP 0031.scaffold00123 886763 1 T G - ReadM SNP 0031.scaffold00123 886892 1 C T - ReadM SNP 0031.scaffold00123 886979 1 C T - ReadM SNP 0031.scaffold00123 887082 1 C T - ReadM SNP 0031.scaffold00123 887092 1 T C - ReadM SNP 0031.scaffold00123 889517 1 C G - ReadM SNP 0031.scaffold00123 889588 1 T C - ReadM INDEL 0031.scaffold00123 889657 3 ... TTT - ReadM SNP 0031.scaffold00123 889701 1 T C - ReadM SNP 0031.scaffold00123 889804 1 T C - ReadM SNP 0031.scaffold00123 889849 1 C T - ReadM SNP 0031.scaffold00123 889966 1 C T - ReadM SNP 0031.scaffold00123 890003 1 T G - ReadM SNP 0031.scaffold00123 890044 1 A G - ReadM SNP 0031.scaffold00123 890117 1 G C - Both SNP 0031.scaffold00123 890154 1 A G scaffold6298 Both SNP 0031.scaffold00123 890185 1 A G scaffold6298 ReadM SNP 0031.scaffold00123 890220 1 G A - ReadM SNP 0031.scaffold00123 890252 1 G A - ReadM INDEL 0031.scaffold00123 890266 1 . A - ReadM SNP 0031.scaffold00123 890361 1 A C - ReadM SNP 0031.scaffold00123 890413 1 G C - Both INDEL 0031.scaffold00123 890458 1 G . scaffold6298 Both SNP 0031.scaffold00123 890486 1 T G scaffold6298 Both SNP 0031.scaffold00123 890502 1 C A scaffold6298 Both SNP 0031.scaffold00123 890564 1 T C scaffold6298 Both INDEL 0031.scaffold00123 890574 1 A . scaffold6298 Both SNP 0031.scaffold00123 890686 1 A T scaffold6298 Both SNP 0031.scaffold00123 890783 1 G T scaffold6298 Both SNP 0031.scaffold00123 890847 1 A G scaffold6298 ReadM SNP 0031.scaffold00123 891019 1 A G - ReadM SNP 0031.scaffold00123 891026 1 A G - ReadM SNP 0031.scaffold00123 891155 1 C T - ReadM SNP 0031.scaffold00123 891170 1 A G - ScafM SNP 0031.scaffold00123 891425 1 C T scaffold6298 ScafM INDEL 0031.scaffold00123 891440 13 ............. AAAGAGAAGCGTC scaffold6298 ScafM SNP 0031.scaffold00123 891537 1 C T scaffold6298 ScafM INDEL 0031.scaffold00123 891547 1 G . scaffold6298 ScafM SNP 0031.scaffold00123 891550 1 T G scaffold6298 ScafM SNP 0031.scaffold00123 891641 1 A G scaffold6298 Both SNP 0031.scaffold00123 892175 1 T C scaffold6298 Both SNP 0031.scaffold00123 892217 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 892228 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 892335 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 892337 1 T C scaffold6298 Both SNP 0031.scaffold00123 892416 1 A G scaffold6298 Both SNP 0031.scaffold00123 892458 1 A G scaffold6298 Both SNP 0031.scaffold00123 892471 1 A C scaffold6298 Both INDEL 0031.scaffold00123 892491 1 C . scaffold6298 ScafM SNP 0031.scaffold00123 892523 1 C T scaffold6298 ScafM INDEL 0031.scaffold00123 892573 5 ..... GCAGA scaffold6298 ScafM INDEL 0031.scaffold00123 892646 3 TTA ... scaffold6298 ScafM SNP 0031.scaffold00123 892808 1 G C scaffold6298 ScafM SNP 0031.scaffold00123 892812 1 C G scaffold6298 ScafM SNP 0031.scaffold00123 892913 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 893365 1 C G scaffold6298 ScafM SNP 0031.scaffold00123 893389 1 A G scaffold6298 Both SNP 0031.scaffold00123 893587 1 A C scaffold6298 ScafM SNP 0031.scaffold00123 893624 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 893640 2 CA TC scaffold6298 ScafM SNP 0031.scaffold00123 893658 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 893665 1 G T scaffold6298 Both SNP 0031.scaffold00123 893751 1 A G scaffold6298 Both SNP 0031.scaffold00123 893777 1 G A scaffold6298 Both SNP 0031.scaffold00123 893793 1 G T scaffold6298 ScafM INDEL 0031.scaffold00123 893830 2 AA .. scaffold6298 ScafM SNP 0031.scaffold00123 893834 1 A G scaffold6298 ReadM SNP 0031.scaffold00123 893909 1 G C - ReadM SNP 0031.scaffold00123 893936 1 C A - ReadM SNP 0031.scaffold00123 893954 1 T C - ReadM SNP 0031.scaffold00123 893988 1 A C - ScafM INDEL 0031.scaffold00123 894187 2 TT .. scaffold6298 Both SNP 0031.scaffold00123 894278 1 A C scaffold6298 Both SNP 0031.scaffold00123 894359 1 A G scaffold6298 Both SNP 0031.scaffold00123 894372 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 894381 1 T C scaffold6298 Both SNP 0031.scaffold00123 894414 1 G A scaffold6298 ReadM SNP 0031.scaffold00123 894535 1 G A - ReadM SNP 0031.scaffold00123 894614 1 C T - ScafM INDEL 0031.scaffold00123 895389 1 . A scaffold6298 ScafM SNP 0031.scaffold00123 895420 1 T C scaffold6298 Both SNP 0031.scaffold00123 895495 1 T C scaffold6298 ScafM INDEL 0031.scaffold00123 895651 1 . A scaffold6298 ScafM INDEL 0031.scaffold00123 895683 51 ................................................... TGTTTTCTTTCTGGCTAAAAAAAAAAAAAAAATAAAAAAATAAAAACACTA scaffold6298 ScafM INDEL 0031.scaffold00123 895716 1 A . scaffold6298 Both SNP 0031.scaffold00123 895773 1 G C scaffold6298 ScafM SNP 0031.scaffold00123 895814 1 G T scaffold6298 ScafM SNP 0031.scaffold00123 895818 1 G A scaffold6298 ScafM INDEL 0031.scaffold00123 895826 2 TT .. scaffold6298 ScafM SNP 0031.scaffold00123 895853 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 895871 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 895966 1 T A scaffold6298 ScafM SNP 0031.scaffold00123 896289 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 896292 1 A T scaffold6298 ScafM SNP 0031.scaffold00123 897583 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 897594 2 TT CC scaffold6298 ScafM SNP 0031.scaffold00123 897602 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 897609 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 897614 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 897669 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 897805 1 G A scaffold6298 ScafM INDEL 0031.scaffold00123 897843 1 . T scaffold6298 ScafM SNP 0031.scaffold00123 897908 1 T A scaffold6298 ScafM SNP 0031.scaffold00123 897928 1 G A scaffold6298 ScafM INDEL 0031.scaffold00123 897932 6 TGGGTT ...... scaffold6298 ScafM SNP 0031.scaffold00123 898433 1 A C scaffold6298 ScafM SNP 0031.scaffold00123 898549 1 C A scaffold6298 ScafM INDEL 0031.scaffold00123 898559 1 C . scaffold6298 ScafM SNP 0031.scaffold00123 898727 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 898749 1 C G scaffold6298 ScafM SNP 0031.scaffold00123 898779 1 A T scaffold6298 ScafM INDEL 0031.scaffold00123 898796 1 G . scaffold6298 ScafM SNP 0031.scaffold00123 898839 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 898858 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 898902 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 898926 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 898937 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 898953 1 T C scaffold6298 ScafM INDEL 0031.scaffold00123 900621 1 A . scaffold6298 ScafM SNP 0031.scaffold00123 900625 1 T A scaffold6298 ScafM SNP 0031.scaffold00123 900631 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 900637 1 A C scaffold6298 ReadM SNP 0031.scaffold00123 901889 1 G A - ScafM SNP 0031.scaffold00123 902023 1 T G scaffold6298 ScafM SNP 0031.scaffold00123 902077 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 902110 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 902143 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 902180 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 902193 1 G C scaffold6298 ScafM SNP 0031.scaffold00123 902217 1 T G scaffold6298 ScafM SNP 0031.scaffold00123 902244 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 902251 1 C T scaffold6298 Both SNP 0031.scaffold00123 902418 1 C A scaffold6298 Both SNP 0031.scaffold00123 902532 1 G C scaffold6298 Both INDEL 0031.scaffold00123 902556 1 . A scaffold6298 Both SNP 0031.scaffold00123 902652 1 G A scaffold6298 Both SNP 0031.scaffold00123 902679 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 903296 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 903348 2 GC AT scaffold6298 ScafM SNP 0031.scaffold00123 903354 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 903371 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 903377 1 G T scaffold6298 ScafM SNP 0031.scaffold00123 903380 1 G T scaffold6298 ScafM INDEL 0031.scaffold00123 903400 2 .A TT scaffold6298 ScafM SNP 0031.scaffold00123 903417 1 T G scaffold6298 ScafM SNP 0031.scaffold00123 903475 1 A C scaffold6298 ScafM SNP 0031.scaffold00123 903491 1 T C scaffold6298 ScafM SNP 0031.scaffold00123 903502 1 A C scaffold6298 ScafM SNP 0031.scaffold00123 903560 1 A G scaffold6298 ReadM SNP 0031.scaffold00123 903693 1 G C - ReadM SNP 0031.scaffold00123 903726 1 G A - Both SNP 0031.scaffold00123 903753 1 G C scaffold6298 Both SNP 0031.scaffold00123 903979 1 T C scaffold6298 Both SNP 0031.scaffold00123 904030 1 A G scaffold6298 ScafM SNP 0031.scaffold00123 904083 1 C A scaffold6298 ScafM SNP 0031.scaffold00123 904122 1 C T scaffold6298 ScafM SNP 0031.scaffold00123 904395 1 A T scaffold6298 ScafM SNP 0031.scaffold00123 904397 1 A G scaffold6298 Both SNP 0031.scaffold00123 904447 1 A T scaffold6298 ScafM SNP 0031.scaffold00123 904483 1 G A scaffold6298 ScafM SNP 0031.scaffold00123 904597 2 CC TT scaffold6298 ScafM INDEL 0031.scaffold00123 904649 1 A . scaffold6298 ScafM SNP 0031.scaffold00123 904696 1 A G scaffold6298 ScafM INDEL 0031.scaffold00123 904711 1 G . scaffold6298 ScafM SNP 0031.scaffold00123 904847 1 A G scaffold6298 ScafM INDEL 0031.scaffold00123 904859 1 C . scaffold6298 ScafM INDEL 0031.scaffold00123 905035 2 .. TC scaffold7263 ScafM SNP 0031.scaffold00123 905042 1 C T scaffold7263 ScafM INDEL 0031.scaffold00123 905104 3 ATA ... scaffold7263 ScafM SNP 0031.scaffold00123 905177 1 T C scaffold7263 ScafM SNP 0031.scaffold00123 905256 1 G A scaffold7263 ScafM INDEL 0031.scaffold00123 905311 10 TGGGATTCTA .......... scaffold7263 Both INDEL 0031.scaffold00123 905432 1 . T scaffold7263 ScafM SNP 0031.scaffold00123 905458 1 A G scaffold7263 Both SNP 0031.scaffold00123 905517 1 G A scaffold7263 Both SNP 0031.scaffold00123 905523 1 A G scaffold7263 ScafM INDEL 0031.scaffold00123 905543 1 . C scaffold7263 ReadM INDEL 0031.scaffold00123 905906 1 . A - ReadM SNP 0031.scaffold00123 906003 1 C T - ReadM SNP 0031.scaffold00123 906024 1 G A - ReadM SNP 0031.scaffold00123 906033 1 T C - ReadM SNP 0031.scaffold00123 906120 1 C T - ReadM SNP 0031.scaffold00123 906204 1 G A - ReadM SNP 0031.scaffold00123 906263 1 A T - ScafM SNP 0031.scaffold00123 906319 2 TG CA scaffold7263 Both SNP 0031.scaffold00123 906379 1 G T scaffold7263 Both SNP 0031.scaffold00123 906875 1 T A scaffold7263 Both SNP 0031.scaffold00123 907017 1 A T scaffold7263 Both SNP 0031.scaffold00123 907487 1 C T scaffold7263 Both SNP 0031.scaffold00123 907760 1 C G scaffold7263 Both SNP 0031.scaffold00123 907928 1 T C scaffold7263 Both SNP 0031.scaffold00123 908229 1 A T scaffold7263 Both INDEL 0031.scaffold00123 908355 1 . T scaffold7263 Both SNP 0031.scaffold00123 908427 1 G A scaffold7263 Both INDEL 0031.scaffold00123 908608 1 . C scaffold7263 ScafM SNP 0031.scaffold00123 908610 1 G A scaffold7263 Both SNP 0031.scaffold00123 908813 1 T C scaffold7263 Both SNP 0031.scaffold00123 908985 1 G T scaffold7263 Both SNP 0031.scaffold00123 909262 1 T C scaffold7263 Both SNP 0031.scaffold00123 909301 1 G A scaffold7263 Both SNP 0031.scaffold00123 909316 1 A T scaffold7263 Both SNP 0031.scaffold00123 909549 1 T G scaffold7263 Both SNP 0031.scaffold00123 910092 1 G A scaffold7263 ReadM SNP 0031.scaffold00123 910253 1 T G - ReadM SNP 0031.scaffold00123 910284 1 A C - ReadM SNP 0031.scaffold00123 910459 1 A T - ReadM SNP 0031.scaffold00123 910462 1 T G - ReadM SNP 0031.scaffold00123 910532 1 T C - ReadM INDEL 0031.scaffold00123 910676 1 T . - ReadM SNP 0031.scaffold00123 910685 1 C T - Both SNP 0031.scaffold00123 910719 1 C T scaffold7263 Both SNP 0031.scaffold00123 910823 1 C G scaffold7263 Both SNP 0031.scaffold00123 910865 1 T C scaffold7263 ReadM SNP 0031.scaffold00123 910952 1 T A - ReadM SNP 0031.scaffold00123 910996 1 G T - Both SNP 0031.scaffold00123 911018 1 C T scaffold7263 Both SNP 0031.scaffold00123 911634 1 A G scaffold7263 ReadM SNP 0031.scaffold00123 911754 1 A T - ReadM SNP 0031.scaffold00123 911882 1 A G - ReadM INDEL 0031.scaffold00123 912130 1 C . - ReadM SNP 0031.scaffold00123 912236 1 T C - ReadM SNP 0031.scaffold00123 912355 1 A G - ReadM SNP 0031.scaffold00123 912510 1 A G - ReadM SNP 0031.scaffold00123 912542 1 G A - ReadM SNP 0031.scaffold00123 912634 1 T G - Both SNP 0031.scaffold00123 913051 1 C T scaffold7263 Both SNP 0031.scaffold00123 913067 1 T C scaffold7263 Both SNP 0031.scaffold00123 913238 1 A T scaffold7263 ScafM INDEL 0031.scaffold00123 913296 7 ....... AGGGGGG scaffold7263 ReadM SNP 0031.scaffold00123 913403 1 A T - ScafM SNP 0031.scaffold00123 913567 1 C T scaffold7263 Both SNP 0031.scaffold00123 913699 1 A T scaffold7263 ScafM INDEL 0031.scaffold00123 913776 1 A . scaffold7263 ScafM SNP 0031.scaffold00123 913865 1 T A scaffold7263 Both INDEL 0031.scaffold00123 913978 2 TT .. scaffold7263 Both SNP 0031.scaffold00123 914080 1 T C scaffold7263 ScafM INDEL 0031.scaffold00123 914101 5 GAAAA ..... scaffold7263 Both SNP 0031.scaffold00123 914186 1 T A scaffold7263 Both SNP 0031.scaffold00123 915162 1 C G scaffold7263 Both SNP 0031.scaffold00123 915380 1 G C scaffold7263 ScafM INDEL 0031.scaffold00123 915404 1 T . scaffold7263 ScafM SNP 0031.scaffold00123 915580 1 A G scaffold7263 Both SNP 0031.scaffold00123 915661 1 A T scaffold7263 Both SNP 0031.scaffold00123 915748 1 T G scaffold7263 Both SNP 0031.scaffold00123 915792 1 C A scaffold7263 Both SNP 0031.scaffold00123 916149 1 G T scaffold7263 Both SNP 0031.scaffold00123 916506 1 C T scaffold7263 ReadM SNP 0031.scaffold00123 916533 1 T C - ReadM SNP 0031.scaffold00123 916576 1 C A - ReadM SNP 0031.scaffold00123 916660 1 A G - ReadM SNP 0031.scaffold00123 916665 1 T C - ReadM SNP 0031.scaffold00123 916683 1 T G - ReadM SNP 0031.scaffold00123 916855 1 A T - ReadM SNP 0031.scaffold00123 916933 1 C T - ReadM SNP 0031.scaffold00123 917028 1 T C - ScafM INDEL 0031.scaffold00123 917116 18 TTTTGTCAAACATTTCAA .................. scaffold7263 ScafM INDEL 0031.scaffold00123 917218 7 AATCCAA ....... scaffold7263 Both SNP 0031.scaffold00123 917746 1 G A scaffold7263 Both SNP 0031.scaffold00123 917774 1 T G scaffold7263 Both SNP 0031.scaffold00123 917789 1 C T scaffold7263 ScafM INDEL 0031.scaffold00123 917926 14 .............. GGGGGGGGGGGGGG scaffold7263 ScafM SNP 0031.scaffold00123 917928 1 A G scaffold7263 Both INDEL 0031.scaffold00123 917947 1 G . scaffold7263 Both SNP 0031.scaffold00123 918316 1 A G scaffold7263 Both SNP 0031.scaffold00123 918405 1 A T scaffold7263 ReadM INDEL 0031.scaffold00123 918712 3 ... TTT - ScafM INDEL 0031.scaffold00123 918723 5 ..... TTTTT scaffold7263 Both SNP 0031.scaffold00123 919460 1 G T scaffold7263 Both SNP 0031.scaffold00123 919771 1 C A scaffold7263 Both SNP 0031.scaffold00123 919788 1 G A scaffold7263 ScafM SNP 0031.scaffold00123 919812 1 G T scaffold7263 ScafM INDEL 0031.scaffold00123 919834 5 ..... TGACC scaffold7263 Both SNP 0031.scaffold00123 920032 1 T C scaffold7263 Both SNP 0031.scaffold00123 920053 1 C T scaffold7263 Both SNP 0031.scaffold00123 920270 1 T C scaffold7263 ScafM SNP 0031.scaffold00123 920645 1 G C scaffold7263 ScafM INDEL 0031.scaffold00123 920650 11 ........... AACGCGGGCCA scaffold7263 ScafM INDEL 0031.scaffold00123 920652 2 .. CC scaffold7263 ScafM INDEL 0031.scaffold00123 920719 5 ..... GTGCC scaffold7263 ScafM SNP 0031.scaffold00123 920769 1 C T scaffold7263 ScafM SNP 0031.scaffold00123 920782 1 C T scaffold7263 ScafM SNP 0031.scaffold00123 920815 1 T C scaffold7263 ScafM INDEL 0031.scaffold00123 920823 1 . A scaffold7263 ScafM SNP 0031.scaffold00123 920838 1 T C scaffold7263 ScafM SNP 0031.scaffold00123 920852 1 A G scaffold7263 ScafM SNP 0031.scaffold00123 920902 1 G A scaffold7263 ScafM SNP 0031.scaffold00123 925305 1 G C scaffold7263 ScafM SNP 0031.scaffold00123 925401 1 G T scaffold7263 ScafM SNP 0031.scaffold00123 925452 1 A T scaffold7263 ScafM SNP 0031.scaffold00123 925552 1 T A scaffold7263 ScafM SNP 0031.scaffold00123 925560 1 A G scaffold7263 ScafM SNP 0031.scaffold00123 925576 1 T C scaffold7263 ScafM SNP 0031.scaffold00123 925599 1 G A scaffold7263 Both SNP 0031.scaffold00123 925749 1 C T scaffold7263 ReadM SNP 0031.scaffold00123 925843 1 C A - ScafM INDEL 0031.scaffold00123 926058 1 T . scaffold7263 Both SNP 0031.scaffold00123 926183 1 G T scaffold7263 ReadM SNP 0031.scaffold00123 926323 1 G A - ReadM SNP 0031.scaffold00123 926686 1 C A - ReadM INDEL 0031.scaffold00123 926819 1 A . - ReadM SNP 0031.scaffold00123 927279 1 G C - ReadM SNP 0031.scaffold00123 927287 1 C A - ReadM SNP 0031.scaffold00123 927304 1 C T - ReadM SNP 0031.scaffold00123 927635 1 T C - ReadM SNP 0031.scaffold00123 927638 1 C G - ReadM SNP 0031.scaffold00123 927704 1 T C - ReadM SNP 0031.scaffold00123 927948 1 T C - Both SNP 0031.scaffold00123 928461 1 C G scaffold7263 Both SNP 0031.scaffold00123 928517 1 G A scaffold7263 Both SNP 0031.scaffold00123 928528 1 C T scaffold7263 ReadM SNP 0031.scaffold00123 928707 1 G C - ReadM SNP 0031.scaffold00123 928720 1 G A - ReadM SNP 0031.scaffold00123 928738 1 T G - ReadM INDEL 0031.scaffold00123 928986 1 A . - ReadM SNP 0031.scaffold00123 929068 1 C T - ReadM SNP 0031.scaffold00123 929178 1 T A - ReadM SNP 0031.scaffold00123 929231 1 T C - ReadM SNP 0031.scaffold00123 929285 1 T A - ReadM SNP 0031.scaffold00123 929295 1 C T - ReadM SNP 0031.scaffold00123 929482 1 T A - ReadM SNP 0031.scaffold00123 929629 1 C T - ReadM SNP 0031.scaffold00123 929652 1 A G - ReadM SNP 0031.scaffold00123 929701 1 C A - ReadM SNP 0031.scaffold00123 929801 1 G A - ReadM SNP 0031.scaffold00123 929929 1 A G - ReadM SNP 0031.scaffold00123 929939 1 A T - ReadM SNP 0031.scaffold00123 930051 1 A G - ReadM SNP 0031.scaffold00123 930058 1 A G - Both SNP 0031.scaffold00123 930128 1 A G scaffold7263 Both SNP 0031.scaffold00123 930249 1 C T scaffold7263 Both SNP 0031.scaffold00123 930281 1 C T scaffold7263 Both SNP 0031.scaffold00123 930318 1 A G scaffold7263 Both SNP 0031.scaffold00123 930397 1 C A scaffold7263 Both SNP 0031.scaffold00123 930409 1 T C scaffold7263 Both SNP 0031.scaffold00123 930504 1 G A scaffold7263 Both SNP 0031.scaffold00123 930548 1 T C scaffold7263 ReadM SNP 0031.scaffold00123 930705 1 T C - ReadM SNP 0031.scaffold00123 930741 1 A G - Both SNP 0031.scaffold00123 930837 1 T C scaffold7263 Both SNP 0031.scaffold00123 930850 1 G A scaffold7263 Both SNP 0031.scaffold00123 930943 1 C T scaffold7263 Both SNP 0031.scaffold00123 930945 1 G A scaffold7263 Both SNP 0031.scaffold00123 931026 1 A T scaffold7263 Both SNP 0031.scaffold00123 931126 1 C A scaffold7263 ReadM SNP 0031.scaffold00123 931207 1 C T - ReadM SNP 0031.scaffold00123 931255 1 T C - ReadM SNP 0031.scaffold00123 931303 1 C T - ReadM SNP 0031.scaffold00123 931420 1 T C - ReadM SNP 0031.scaffold00123 931471 1 T C - ReadM SNP 0031.scaffold00123 931529 1 G A - ReadM SNP 0031.scaffold00123 931691 1 A G - ReadM SNP 0031.scaffold00123 931727 1 A T - ReadM SNP 0031.scaffold00123 931754 1 G T - ReadM SNP 0031.scaffold00123 931786 1 C T - ReadM SNP 0031.scaffold00123 931804 1 T G - ReadM SNP 0031.scaffold00123 931954 1 T A - ReadM SNP 0031.scaffold00123 932067 1 G T - ReadM SNP 0031.scaffold00123 932180 1 C A - ReadM SNP 0031.scaffold00123 932210 1 T C - ReadM SNP 0031.scaffold00123 932352 1 T C - ReadM SNP 0031.scaffold00123 932390 1 A G - ReadM SNP 0031.scaffold00123 932580 1 G A - ReadM SNP 0031.scaffold00123 932682 1 T C - ReadM SNP 0031.scaffold00123 932823 1 A G - ReadM SNP 0031.scaffold00123 932862 1 G A - ReadM SNP 0031.scaffold00123 932908 1 A C - ReadM SNP 0031.scaffold00123 932919 1 C T - ReadM SNP 0031.scaffold00123 932991 1 A T - ReadM SNP 0031.scaffold00123 933023 1 C A - ReadM SNP 0031.scaffold00123 933044 1 G A - ReadM SNP 0031.scaffold00123 933118 1 C T - ReadM SNP 0031.scaffold00123 933149 1 G T - ReadM SNP 0031.scaffold00123 933167 1 C T - ReadM SNP 0031.scaffold00123 933180 1 A T - ReadM SNP 0031.scaffold00123 933198 1 T G - ReadM SNP 0031.scaffold00123 933255 1 A C - ReadM SNP 0031.scaffold00123 933287 1 G A - ReadM INDEL 0031.scaffold00123 933311 1 A . - ReadM SNP 0031.scaffold00123 933506 1 C T - ReadM SNP 0031.scaffold00123 933603 1 G A - ReadM SNP 0031.scaffold00123 933631 1 T C - ReadM SNP 0031.scaffold00123 933698 1 G A - ReadM SNP 0031.scaffold00123 933800 1 G A - ReadM SNP 0031.scaffold00123 933959 1 T G - ReadM SNP 0031.scaffold00123 933977 1 T C - ReadM SNP 0031.scaffold00123 934036 1 A T - ReadM SNP 0031.scaffold00123 934059 1 A G - ReadM SNP 0031.scaffold00123 934217 1 T G - ReadM SNP 0031.scaffold00123 934223 1 C T - ReadM INDEL 0031.scaffold00123 934358 1 . T - ReadM SNP 0031.scaffold00123 934373 1 T A - ReadM SNP 0031.scaffold00123 934467 1 T G - ReadM SNP 0031.scaffold00123 934504 1 G A - ReadM SNP 0031.scaffold00123 934646 1 G A - ReadM SNP 0031.scaffold00123 934687 1 G A - ReadM SNP 0031.scaffold00123 934832 1 G T - ReadM SNP 0031.scaffold00123 934988 1 T C - ReadM SNP 0031.scaffold00123 935840 1 A G - ReadM SNP 0031.scaffold00123 935927 1 C A - ReadM SNP 0031.scaffold00123 936032 1 A G - ReadM SNP 0031.scaffold00123 936167 1 A T - ReadM SNP 0031.scaffold00123 936224 1 G A - ReadM SNP 0031.scaffold00123 936247 1 G T - ReadM SNP 0031.scaffold00123 936313 1 T C - ReadM SNP 0031.scaffold00123 936346 1 A T - ReadM SNP 0031.scaffold00123 936395 1 T G - ReadM SNP 0031.scaffold00123 936470 1 A C - ReadM SNP 0031.scaffold00123 936702 1 G A - ScafM SNP 0031.scaffold00123 938674 1 G T scaffold8864 ReadM SNP 0031.scaffold00123 939153 1 C T - ReadM SNP 0031.scaffold00123 939178 1 C T - ReadM SNP 0031.scaffold00123 939190 1 A T - ReadM SNP 0031.scaffold00123 948212 1 G T - ReadM SNP 0031.scaffold00123 948376 1 T A - ReadM SNP 0031.scaffold00123 948391 1 A G - ReadM SNP 0031.scaffold00123 948731 1 A T - ReadM SNP 0031.scaffold00123 948805 1 T A - ReadM SNP 0031.scaffold00123 949324 1 A T - ReadM SNP 0031.scaffold00123 949692 1 A C - ReadM SNP 0031.scaffold00123 949756 1 C A - ReadM SNP 0031.scaffold00123 949840 1 C T - ReadM SNP 0031.scaffold00123 950437 1 A C - ReadM SNP 0031.scaffold00123 950469 1 G T - ReadM SNP 0031.scaffold00123 950976 1 T C - ReadM SNP 0031.scaffold00123 951143 1 A T - ReadM SNP 0031.scaffold00123 951553 1 A T - ReadM SNP 0031.scaffold00123 951976 1 G A - ReadM SNP 0031.scaffold00123 952008 1 A T - ReadM SNP 0031.scaffold00123 952025 1 G C - ReadM SNP 0031.scaffold00123 952076 1 T G - ReadM SNP 0031.scaffold00123 952199 1 G T - ReadM SNP 0031.scaffold00123 953008 1 G T - ReadM SNP 0031.scaffold00123 953017 1 C T - ReadM SNP 0031.scaffold00123 954747 1 G A - ReadM SNP 0031.scaffold00123 954998 1 C T - ReadM SNP 0031.scaffold00123 955069 1 T G - ReadM INDEL 0031.scaffold00123 968197 1 G . - ReadM SNP 0031.scaffold00123 968206 1 G A - ReadM SNP 0031.scaffold00123 968588 1 A G - ReadM SNP 0031.scaffold00123 968814 1 A G - ReadM SNP 0031.scaffold00123 968850 1 T C - ReadM SNP 0031.scaffold00123 968868 1 T G - ReadM SNP 0031.scaffold00123 969478 1 T C - ReadM SNP 0031.scaffold00123 969641 1 A G - ReadM SNP 0031.scaffold00123 969985 1 C T - ReadM SNP 0031.scaffold00123 970004 1 T C - ReadM SNP 0031.scaffold00123 970012 1 C T - ReadM SNP 0031.scaffold00123 970145 1 G T - ReadM SNP 0031.scaffold00123 970191 1 T C - ReadM SNP 0031.scaffold00123 970492 1 G A - ReadM SNP 0031.scaffold00123 970543 1 T C - ReadM SNP 0031.scaffold00123 970724 1 T C - ReadM SNP 0031.scaffold00123 971320 1 G T - ReadM SNP 0031.scaffold00123 972288 1 G A - ReadM SNP 0031.scaffold00123 972809 1 C T - ReadM SNP 0031.scaffold00123 972859 1 A G - ReadM SNP 0031.scaffold00123 972887 1 C T - ReadM SNP 0031.scaffold00123 973104 1 T G - ReadM SNP 0031.scaffold00123 973136 1 T C - ReadM SNP 0031.scaffold00123 973245 1 T A - ReadM SNP 0031.scaffold00123 973282 1 A G - ReadM SNP 0031.scaffold00123 975248 1 A C - ReadM SNP 0031.scaffold00123 975293 1 T C - ReadM SNP 0031.scaffold00123 975754 1 C T - ReadM SNP 0031.scaffold00123 975813 1 G A - ReadM SNP 0031.scaffold00123 975816 1 T C - ReadM SNP 0031.scaffold00123 975832 1 T G - ReadM SNP 0031.scaffold00123 975894 1 C A - ReadM SNP 0031.scaffold00123 982956 1 C T - ReadM SNP 0031.scaffold00123 982967 1 A C - ScafM SNP 0031.scaffold00123 985937 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 986040 1 A C scaffold16375 ScafM SNP 0031.scaffold00123 986050 1 C T scaffold16375 Both SNP 0031.scaffold00123 986104 1 G A scaffold16375 Both SNP 0031.scaffold00123 986259 1 C T scaffold16375 Both SNP 0031.scaffold00123 986350 1 G T scaffold16375 Both SNP 0031.scaffold00123 986356 1 T C scaffold16375 Both SNP 0031.scaffold00123 986379 1 T A scaffold16375 Both INDEL 0031.scaffold00123 986418 1 . G scaffold16375 ReadM SNP 0031.scaffold00123 986525 1 G A - Both SNP 0031.scaffold00123 986963 1 G T scaffold16375 ScafM SNP 0031.scaffold00123 987057 1 T C scaffold16375 ScafM SNP 0031.scaffold00123 987063 1 A T scaffold16375 ScafM SNP 0031.scaffold00123 987075 1 G A scaffold16375 ReadM SNP 0031.scaffold00123 987546 1 C A - ReadM SNP 0031.scaffold00123 987584 1 C T - ReadM SNP 0031.scaffold00123 987626 1 T A - ReadM SNP 0031.scaffold00123 987649 1 A C - ReadM SNP 0031.scaffold00123 987833 1 A T - ReadM SNP 0031.scaffold00123 987847 1 G A - ReadM SNP 0031.scaffold00123 987864 1 C T - ReadM INDEL 0031.scaffold00123 988384 1 G . - ReadM SNP 0031.scaffold00123 988425 1 C G - Both SNP 0031.scaffold00123 988502 1 A T scaffold16375 ReadM SNP 0031.scaffold00123 988625 1 A G - ReadM SNP 0031.scaffold00123 988698 1 A G - ReadM SNP 0031.scaffold00123 988791 1 C T - ReadM SNP 0031.scaffold00123 988798 1 C T - ReadM SNP 0031.scaffold00123 988807 1 C T - ReadM INDEL 0031.scaffold00123 988867 2 .. AA - ReadM SNP 0031.scaffold00123 988901 1 G A - ReadM SNP 0031.scaffold00123 988963 1 G A - ReadM SNP 0031.scaffold00123 989009 1 C T - ReadM SNP 0031.scaffold00123 989017 1 T C - ReadM SNP 0031.scaffold00123 989387 1 A C - ReadM SNP 0031.scaffold00123 989391 1 T C - ReadM SNP 0031.scaffold00123 989469 1 G A - ReadM SNP 0031.scaffold00123 989576 1 C T - ReadM SNP 0031.scaffold00123 991804 1 G A - ReadM SNP 0031.scaffold00123 991849 1 T C - ReadM SNP 0031.scaffold00123 991898 1 A C - ReadM SNP 0031.scaffold00123 991933 1 C T - ReadM SNP 0031.scaffold00123 991936 1 T C - ReadM SNP 0031.scaffold00123 992024 1 C A - ReadM SNP 0031.scaffold00123 992250 1 C A - ReadM SNP 0031.scaffold00123 992355 1 G A - ReadM SNP 0031.scaffold00123 992379 1 A G - ReadM SNP 0031.scaffold00123 992384 1 T A - ReadM SNP 0031.scaffold00123 992463 1 T C - ReadM SNP 0031.scaffold00123 992677 1 T C - ReadM SNP 0031.scaffold00123 992804 1 T C - ReadM SNP 0031.scaffold00123 992915 1 A G - ReadM SNP 0031.scaffold00123 992968 1 C G - ReadM SNP 0031.scaffold00123 993128 1 T C - ReadM SNP 0031.scaffold00123 993179 1 A T - ReadM SNP 0031.scaffold00123 993205 1 T G - ReadM SNP 0031.scaffold00123 993257 1 C T - ReadM SNP 0031.scaffold00123 993355 1 T C - ReadM SNP 0031.scaffold00123 993381 1 C T - ReadM SNP 0031.scaffold00123 993410 1 T C - ReadM SNP 0031.scaffold00123 993546 1 A G - ReadM SNP 0031.scaffold00123 993606 1 C A - ReadM SNP 0031.scaffold00123 993989 1 A G - ReadM SNP 0031.scaffold00123 994131 1 C A - ReadM SNP 0031.scaffold00123 994277 1 T C - ReadM SNP 0031.scaffold00123 994280 1 C T - ReadM SNP 0031.scaffold00123 994310 1 C A - ReadM SNP 0031.scaffold00123 994351 1 A C - ReadM SNP 0031.scaffold00123 994397 1 G A - ReadM SNP 0031.scaffold00123 994501 1 T C - ReadM SNP 0031.scaffold00123 994520 1 G A - ReadM SNP 0031.scaffold00123 994853 1 G A - ReadM SNP 0031.scaffold00123 994901 1 A C - ReadM SNP 0031.scaffold00123 994907 1 T C - ReadM SNP 0031.scaffold00123 994985 1 G C - ReadM SNP 0031.scaffold00123 995011 1 C T - ReadM SNP 0031.scaffold00123 995098 1 T C - ReadM SNP 0031.scaffold00123 995291 1 A G - ReadM SNP 0031.scaffold00123 995365 1 C T - ReadM SNP 0031.scaffold00123 995406 1 A G - ReadM SNP 0031.scaffold00123 995526 1 G A - ReadM SNP 0031.scaffold00123 995530 1 A G - ReadM SNP 0031.scaffold00123 995610 1 A G - ReadM SNP 0031.scaffold00123 995638 1 T A - ReadM SNP 0031.scaffold00123 995702 1 A G - ReadM SNP 0031.scaffold00123 995749 1 C T - ReadM SNP 0031.scaffold00123 996544 1 C A - ReadM SNP 0031.scaffold00123 996580 1 A C - ReadM SNP 0031.scaffold00123 996618 1 A G - ReadM SNP 0031.scaffold00123 996748 1 A G - ReadM SNP 0031.scaffold00123 996841 1 T C - ReadM SNP 0031.scaffold00123 996998 1 T A - ReadM SNP 0031.scaffold00123 997026 1 C G - ReadM SNP 0031.scaffold00123 997092 1 G A - ReadM SNP 0031.scaffold00123 997163 1 A G - ReadM SNP 0031.scaffold00123 997309 1 G A - ReadM SNP 0031.scaffold00123 997412 1 A G - ReadM SNP 0031.scaffold00123 997456 1 A C - ReadM SNP 0031.scaffold00123 997553 1 G A - ReadM SNP 0031.scaffold00123 997623 1 A C - ReadM SNP 0031.scaffold00123 997783 1 G T - ReadM SNP 0031.scaffold00123 997793 1 A G - ReadM SNP 0031.scaffold00123 997813 1 A C - ReadM SNP 0031.scaffold00123 997879 1 T C - ReadM SNP 0031.scaffold00123 997940 1 A G - ReadM SNP 0031.scaffold00123 997945 1 A G - ReadM SNP 0031.scaffold00123 997984 1 A G - ReadM SNP 0031.scaffold00123 998117 1 G C - ReadM SNP 0031.scaffold00123 998230 1 C A - ReadM SNP 0031.scaffold00123 998250 1 A G - ReadM SNP 0031.scaffold00123 998356 1 G A - ReadM SNP 0031.scaffold00123 998373 1 T C - ReadM SNP 0031.scaffold00123 998401 1 C T - ReadM SNP 0031.scaffold00123 998535 1 G A - ScafM SNP 0031.scaffold00123 998717 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 998722 2 TT AA scaffold16375 Both SNP 0031.scaffold00123 998794 1 C T scaffold16375 Both SNP 0031.scaffold00123 998839 1 C T scaffold16375 Both SNP 0031.scaffold00123 998846 1 C T scaffold16375 Both INDEL 0031.scaffold00123 999057 1 A . scaffold16375 Both SNP 0031.scaffold00123 999070 1 G C scaffold16375 ReadM SNP 0031.scaffold00123 999081 1 A G - ReadM SNP 0031.scaffold00123 999265 1 T C - ReadM SNP 0031.scaffold00123 999380 1 C T - ReadM SNP 0031.scaffold00123 999618 1 T C - ReadM SNP 0031.scaffold00123 999944 1 A T - ReadM SNP 0031.scaffold00123 1000020 1 G C - ReadM SNP 0031.scaffold00123 1000081 1 A G - ReadM SNP 0031.scaffold00123 1000121 1 G T - ReadM SNP 0031.scaffold00123 1000139 1 T C - ReadM SNP 0031.scaffold00123 1000242 1 G A - ReadM SNP 0031.scaffold00123 1000289 1 G A - ReadM SNP 0031.scaffold00123 1000338 1 T C - ReadM SNP 0031.scaffold00123 1000410 1 A C - ReadM INDEL 0031.scaffold00123 1000454 1 A . - ReadM SNP 0031.scaffold00123 1000605 1 T C - Both SNP 0031.scaffold00123 1000647 1 C G scaffold16375 Both SNP 0031.scaffold00123 1000997 1 T C scaffold16375 Both SNP 0031.scaffold00123 1001040 1 C T scaffold16375 ScafM INDEL 0031.scaffold00123 1001128 4 .... TGAC scaffold16375 Both SNP 0031.scaffold00123 1001155 1 A G scaffold16375 Both SNP 0031.scaffold00123 1001266 1 T C scaffold16375 Both SNP 0031.scaffold00123 1001332 1 T C scaffold16375 Both SNP 0031.scaffold00123 1001372 1 G A scaffold16375 Both SNP 0031.scaffold00123 1001436 1 G A scaffold16375 Both SNP 0031.scaffold00123 1001609 1 T C scaffold16375 Both SNP 0031.scaffold00123 1001661 1 C T scaffold16375 ScafM INDEL 0031.scaffold00123 1001940 6 GATTGA ...... scaffold16375 Both SNP 0031.scaffold00123 1002133 1 C T scaffold16375 Both SNP 0031.scaffold00123 1002309 1 T C scaffold16375 Both SNP 0031.scaffold00123 1002348 1 A G scaffold16375 Both SNP 0031.scaffold00123 1002389 1 A G scaffold16375 Both SNP 0031.scaffold00123 1002402 1 A G scaffold16375 Both INDEL 0031.scaffold00123 1002498 1 T . scaffold16375 Both SNP 0031.scaffold00123 1002540 1 A C scaffold16375 Both SNP 0031.scaffold00123 1002576 1 G A scaffold16375 Both SNP 0031.scaffold00123 1002634 1 G C scaffold16375 ScafM SNP 0031.scaffold00123 1002648 1 C T scaffold16375 ScafM INDEL 0031.scaffold00123 1002658 7 ....... CAAATAC scaffold16375 ScafM INDEL 0031.scaffold00123 1002663 6 ...... CCATTC scaffold16375 ScafM INDEL 0031.scaffold00123 1002664 1 . G scaffold16375 ScafM SNP 0031.scaffold00123 1002699 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 1002704 2 TC CT scaffold16375 ScafM SNP 0031.scaffold00123 1002944 1 G A scaffold16375 ScafM INDEL 0031.scaffold00123 1002953 6 ...... TTGTTT scaffold16375 ScafM SNP 0031.scaffold00123 1002955 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 1002968 1 T C scaffold16375 ScafM INDEL 0031.scaffold00123 1003000 2 .G TA scaffold16375 ScafM SNP 0031.scaffold00123 1003012 1 T C scaffold16375 ScafM INDEL 0031.scaffold00123 1003018 5 TAATA ..... scaffold16375 ScafM SNP 0031.scaffold00123 1003038 1 T A scaffold16375 ScafM SNP 0031.scaffold00123 1003091 1 G A scaffold16375 ScafM SNP 0031.scaffold00123 1003118 1 A G scaffold16375 ScafM SNP 0031.scaffold00123 1003120 1 G A scaffold16375 ScafM SNP 0031.scaffold00123 1003129 1 G A scaffold16375 ScafM INDEL 0031.scaffold00123 1003146 1 A . scaffold16375 Both SNP 0031.scaffold00123 1003176 1 T C scaffold16375 Both SNP 0031.scaffold00123 1003180 1 A G scaffold16375 Both SNP 0031.scaffold00123 1003318 1 T C scaffold16375 Both SNP 0031.scaffold00123 1003353 1 C T scaffold16375 ScafM INDEL 0031.scaffold00123 1003381 40 TGACCCCTTCACCCAAGCTATACCTCCCATACTCTTTGCA ........................................ scaffold16375 ScafM SNP 0031.scaffold00123 1003471 1 T C scaffold16375 ScafM SNP 0031.scaffold00123 1003493 1 T C scaffold16375 ReadM SNP 0031.scaffold00123 1003510 1 T A - ScafM SNP 0031.scaffold00123 1003510 2 TG AA scaffold16375 Both SNP 0031.scaffold00123 1003572 1 T G scaffold16375 ReadM SNP 0031.scaffold00123 1003793 1 A G - ReadM SNP 0031.scaffold00123 1003874 1 A G - ReadM SNP 0031.scaffold00123 1003953 1 C T - ReadM SNP 0031.scaffold00123 1004024 1 A G - ReadM SNP 0031.scaffold00123 1004228 1 C A - ReadM SNP 0031.scaffold00123 1004368 1 T C - ReadM SNP 0031.scaffold00123 1004539 1 T C - ReadM SNP 0031.scaffold00123 1004573 1 A G - ReadM SNP 0031.scaffold00123 1004594 1 A C - ReadM SNP 0031.scaffold00123 1004683 1 C T - ReadM SNP 0031.scaffold00123 1004708 1 T G - ReadM SNP 0031.scaffold00123 1004724 1 C G - ReadM SNP 0031.scaffold00123 1004798 1 A G - ReadM SNP 0031.scaffold00123 1004814 1 G C - ReadM SNP 0031.scaffold00123 1004957 1 C T - ReadM SNP 0031.scaffold00123 1005330 1 C A - ReadM SNP 0031.scaffold00123 1005448 1 C T - ReadM SNP 0031.scaffold00123 1005456 1 C T - ReadM SNP 0031.scaffold00123 1005492 1 A G - ReadM SNP 0031.scaffold00123 1005551 1 C T - ReadM SNP 0031.scaffold00123 1005580 1 T G - ReadM SNP 0031.scaffold00123 1005589 1 C A - Both SNP 0031.scaffold00123 1005671 1 A T scaffold16375 Both SNP 0031.scaffold00123 1005677 1 C T scaffold16375 ReadM SNP 0031.scaffold00123 1005775 1 C T - ReadM SNP 0031.scaffold00123 1006074 1 A T - ReadM SNP 0031.scaffold00123 1006247 1 G T - ReadM SNP 0031.scaffold00123 1006359 1 C T - ReadM SNP 0031.scaffold00123 1006431 1 G A - ReadM SNP 0031.scaffold00123 1006462 1 A G - ReadM SNP 0031.scaffold00123 1006655 1 T C - ReadM SNP 0031.scaffold00123 1006718 1 A G - ReadM SNP 0031.scaffold00123 1006779 1 T C - ReadM SNP 0031.scaffold00123 1006828 1 C T - ReadM SNP 0031.scaffold00123 1006879 1 T A - ReadM SNP 0031.scaffold00123 1006900 1 C T - ReadM SNP 0031.scaffold00123 1006952 1 A C - ReadM SNP 0031.scaffold00123 1007070 1 C A - ReadM SNP 0031.scaffold00123 1007081 1 T C - ReadM SNP 0031.scaffold00123 1007190 1 C T - ScafM SNP 0031.scaffold00123 1007249 2 GC CT scaffold16375 ScafM SNP 0031.scaffold00123 1007256 1 T C scaffold16375 ScafM SNP 0031.scaffold00123 1007276 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 1007292 1 A G scaffold16375 Both SNP 0031.scaffold00123 1007333 1 T G scaffold16375 Both INDEL 0031.scaffold00123 1007499 1 T . scaffold16375 ScafM SNP 0031.scaffold00123 1007530 1 C A scaffold16375 ScafM SNP 0031.scaffold00123 1007532 1 A G scaffold16375 Both SNP 0031.scaffold00123 1007747 1 G A scaffold16375 Both SNP 0031.scaffold00123 1007774 1 T A scaffold16375 Both SNP 0031.scaffold00123 1007813 1 G A scaffold16375 Both SNP 0031.scaffold00123 1007878 1 C T scaffold16375 Both SNP 0031.scaffold00123 1007934 1 A G scaffold16375 Both SNP 0031.scaffold00123 1007941 1 C G scaffold16375 Both SNP 0031.scaffold00123 1007985 1 T C scaffold16375 Both SNP 0031.scaffold00123 1008033 1 G A scaffold16375 ScafM SNP 0031.scaffold00123 1008091 1 A T scaffold16375 ScafM INDEL 0031.scaffold00123 1008100 30 TGGGATACAGAAATTATTTATTAAACGGTT .............................. scaffold16375 Both SNP 0031.scaffold00123 1008160 1 A G scaffold16375 Both SNP 0031.scaffold00123 1008214 1 G T scaffold16375 Both SNP 0031.scaffold00123 1008367 1 A G scaffold16375 ScafM SNP 0031.scaffold00123 1008401 1 A T scaffold16375 Both SNP 0031.scaffold00123 1008455 1 G A scaffold16375 Both SNP 0031.scaffold00123 1008468 1 T A scaffold16375 Both INDEL 0031.scaffold00123 1008566 1 G . scaffold16375 Both SNP 0031.scaffold00123 1008592 1 C T scaffold16375 ReadM SNP 0031.scaffold00123 1008779 1 T C - ReadM SNP 0031.scaffold00123 1008983 1 A G - ScafM SNP 0031.scaffold00123 1009188 1 C A scaffold16375 ReadM SNP 0031.scaffold00123 1009489 1 C A - ScafM SNP 0031.scaffold00123 1009772 1 T A scaffold16375 ScafM SNP 0031.scaffold00123 1009783 1 T A scaffold16375 ScafM SNP 0031.scaffold00123 1009849 1 C T scaffold16375 ReadM SNP 0031.scaffold00123 1010598 1 G A - ReadM SNP 0031.scaffold00123 1010849 1 T C - ReadM INDEL 0031.scaffold00123 1010939 1 . A - ReadM SNP 0031.scaffold00123 1011065 1 A G - ScafM SNP 0031.scaffold00123 1011243 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 1011247 1 T G scaffold16375 Both SNP 0031.scaffold00123 1011302 1 A T scaffold16375 Both SNP 0031.scaffold00123 1011333 1 T C scaffold16375 Both SNP 0031.scaffold00123 1011348 1 C T scaffold16375 ReadM SNP 0031.scaffold00123 1011381 1 C A - ReadM SNP 0031.scaffold00123 1011473 1 C T - ReadM SNP 0031.scaffold00123 1011579 1 T G - ReadM SNP 0031.scaffold00123 1011596 1 G A - ReadM SNP 0031.scaffold00123 1011772 1 C A - ReadM SNP 0031.scaffold00123 1011940 1 A C - ReadM SNP 0031.scaffold00123 1012019 1 A G - ReadM SNP 0031.scaffold00123 1012109 1 C T - ReadM SNP 0031.scaffold00123 1012311 1 G T - ReadM SNP 0031.scaffold00123 1012371 1 A G - ReadM SNP 0031.scaffold00123 1012461 1 C T - ReadM SNP 0031.scaffold00123 1012539 1 A G - ReadM SNP 0031.scaffold00123 1012726 1 G T - ReadM SNP 0031.scaffold00123 1012801 1 G T - ReadM SNP 0031.scaffold00123 1012934 1 T G - ReadM SNP 0031.scaffold00123 1012946 1 G A - ReadM SNP 0031.scaffold00123 1013017 1 T C - ReadM SNP 0031.scaffold00123 1013025 1 T C - ReadM SNP 0031.scaffold00123 1013067 1 T C - ReadM SNP 0031.scaffold00123 1013110 1 T C - ReadM SNP 0031.scaffold00123 1013318 1 C A - ReadM SNP 0031.scaffold00123 1013380 1 T C - ReadM SNP 0031.scaffold00123 1013411 1 A C - ReadM SNP 0031.scaffold00123 1013508 1 C T - ReadM SNP 0031.scaffold00123 1013570 1 G C - ReadM SNP 0031.scaffold00123 1013613 1 C T - ReadM SNP 0031.scaffold00123 1013663 1 A G - ReadM SNP 0031.scaffold00123 1014087 1 C T - ScafM SNP 0031.scaffold00123 1014664 1 G A scaffold16375 ScafM SNP 0031.scaffold00123 1014722 1 G T scaffold16375 ScafM SNP 0031.scaffold00123 1014725 1 C A scaffold16375 ScafM INDEL 0031.scaffold00123 1014764 5 CCCCC ..... scaffold16375 ScafM SNP 0031.scaffold00123 1014843 1 A G scaffold16375 Both SNP 0031.scaffold00123 1014884 1 T C scaffold16375 Both SNP 0031.scaffold00123 1014953 1 T C scaffold16375 Both SNP 0031.scaffold00123 1015007 1 A G scaffold16375 Both SNP 0031.scaffold00123 1015158 1 A G scaffold16375 ScafM SNP 0031.scaffold00123 1015437 1 G T scaffold16375 ScafM SNP 0031.scaffold00123 1015445 1 G T scaffold16375 ScafM SNP 0031.scaffold00123 1015451 1 G C scaffold16375 ReadM SNP 0031.scaffold00123 1015872 1 T C - ScafM SNP 0031.scaffold00123 1015923 1 A G scaffold16375 ScafM SNP 0031.scaffold00123 1015972 1 T G scaffold16375 ScafM SNP 0031.scaffold00123 1015986 1 T G scaffold16375 ScafM SNP 0031.scaffold00123 1016002 1 G C scaffold16375 ScafM SNP 0031.scaffold00123 1016008 1 T C scaffold16375 Both SNP 0031.scaffold00123 1016093 1 C A scaffold16375 ReadM SNP 0031.scaffold00123 1016411 1 T A - Both SNP 0031.scaffold00123 1016776 1 T C scaffold16375 ScafM SNP 0031.scaffold00123 1016907 1 G A scaffold16375 Both SNP 0031.scaffold00123 1016936 1 T C scaffold16375 ScafM SNP 0031.scaffold00123 1017093 1 T C scaffold16375 ScafM INDEL 0031.scaffold00123 1017101 2 .. TT scaffold16375 ScafM SNP 0031.scaffold00123 1017107 1 C T scaffold16375 ScafM SNP 0031.scaffold00123 1017185 1 C T scaffold16375 ReadM SNP 0031.scaffold00123 1018160 1 G C - ReadM SNP 0031.scaffold00123 1019805 1 T G - ReadM SNP 0031.scaffold00123 1019913 1 C T - ReadM INDEL 0031.scaffold00123 1019919 1 . A - ReadM SNP 0031.scaffold00123 1021238 1 C A - ReadM SNP 0031.scaffold00123 1021460 1 A T - ReadM SNP 0031.scaffold00123 1021536 1 T A - ReadM SNP 0031.scaffold00123 1021572 1 T A - ReadM SNP 0031.scaffold00123 1021774 1 G T - ReadM SNP 0031.scaffold00123 1021941 1 T A - ReadM SNP 0031.scaffold00123 1021988 1 G A - ReadM SNP 0031.scaffold00123 1022173 1 A G - ReadM SNP 0031.scaffold00123 1022232 1 T C - ReadM INDEL 0031.scaffold00123 1022338 1 T . - ReadM SNP 0031.scaffold00123 1022519 1 T C - ReadM SNP 0031.scaffold00123 1022549 1 T C - ScafM INDEL 0031.scaffold00123 1024388 2 TT .. scaffold16270 ScafM SNP 0031.scaffold00123 1024405 1 G A scaffold16270 ScafM INDEL 0031.scaffold00123 1024433 1 C . scaffold16270 ScafM INDEL 0031.scaffold00123 1024658 1 . G scaffold16270 ScafM SNP 0031.scaffold00123 1024760 1 T C scaffold16270 ReadM SNP 0031.scaffold00123 1024860 1 C G - ReadM SNP 0031.scaffold00123 1025398 1 T G - ScafM INDEL 0031.scaffold00123 1025694 6 ...... CATCTT scaffold16270 ScafM SNP 0031.scaffold00123 1025707 1 T C scaffold16270 ScafM SNP 0031.scaffold00123 1025779 1 T C scaffold16270 ScafM SNP 0031.scaffold00123 1025782 1 A T scaffold16270 ScafM SNP 0031.scaffold00123 1025817 1 T C scaffold16270 ScafM SNP 0031.scaffold00123 1025832 1 T C scaffold16270 Both SNP 0031.scaffold00123 1025856 1 T G scaffold16270 Both SNP 0031.scaffold00123 1025900 1 C T scaffold16270 Both SNP 0031.scaffold00123 1025931 1 G A scaffold16270 Both SNP 0031.scaffold00123 1026010 1 T G scaffold16270 ScafM INDEL 0031.scaffold00123 1026031 6 TTTTTT ...... scaffold16270 Both SNP 0031.scaffold00123 1026051 1 C T scaffold16270 ReadM SNP 0031.scaffold00123 1026221 1 T C - ReadM SNP 0031.scaffold00123 1026246 1 C T - ReadM SNP 0031.scaffold00123 1026287 1 T C - ReadM SNP 0031.scaffold00123 1026314 1 A G - ReadM SNP 0031.scaffold00123 1026318 1 A G - ReadM INDEL 0031.scaffold00123 1026405 1 . G - ReadM SNP 0031.scaffold00123 1026538 1 A C - ReadM SNP 0031.scaffold00123 1026679 1 C T - ReadM SNP 0031.scaffold00123 1026814 1 C T - ReadM SNP 0031.scaffold00123 1026841 1 C T - ReadM SNP 0031.scaffold00123 1026900 1 T C - ReadM SNP 0031.scaffold00123 1026927 1 T C - ReadM SNP 0031.scaffold00123 1027065 1 C A - ReadM SNP 0031.scaffold00123 1027095 1 C G - ReadM SNP 0031.scaffold00123 1027381 1 A T - ReadM INDEL 0031.scaffold00123 1027413 1 . T - ReadM SNP 0031.scaffold00123 1027459 1 A G - ReadM SNP 0031.scaffold00123 1027658 1 C A - ReadM SNP 0031.scaffold00123 1027885 1 T C - ReadM INDEL 0031.scaffold00123 1027978 1 C . - ReadM SNP 0031.scaffold00123 1028323 1 C T - ReadM SNP 0031.scaffold00123 1028357 1 T G - ReadM SNP 0031.scaffold00123 1028414 1 T C - ReadM SNP 0031.scaffold00123 1028906 1 T A - ReadM SNP 0031.scaffold00123 1028911 1 C T - ReadM SNP 0031.scaffold00123 1029039 1 A T - ReadM SNP 0031.scaffold00123 1029056 1 T A - ReadM SNP 0031.scaffold00123 1029395 1 G A - Both SNP 0031.scaffold00123 1029547 1 G A scaffold16270 Both SNP 0031.scaffold00123 1029571 1 G T scaffold16270 Both SNP 0031.scaffold00123 1029653 1 G T scaffold16270 ScafM SNP 0031.scaffold00123 1029683 1 G A scaffold16270 ScafM SNP 0031.scaffold00123 1029786 1 T C scaffold16270 ScafM INDEL 0031.scaffold00123 1029807 2 TT .. scaffold16270 ScafM INDEL 0031.scaffold00123 1029813 1 T . scaffold16270 ScafM SNP 0031.scaffold00123 1029834 1 G T scaffold16270 Both INDEL 0031.scaffold00123 1030146 1 A . scaffold16270 ReadM SNP 0031.scaffold00123 1030211 1 C T - ReadM INDEL 0031.scaffold00123 1030260 1 A . - ReadM SNP 0031.scaffold00123 1030333 1 C T - ReadM SNP 0031.scaffold00123 1030517 1 A C - ReadM SNP 0031.scaffold00123 1030723 1 A G - ReadM SNP 0031.scaffold00123 1030732 1 C T - ReadM SNP 0031.scaffold00123 1030748 1 T C - ReadM SNP 0031.scaffold00123 1030781 1 G A - Both SNP 0031.scaffold00123 1030883 1 G T scaffold16270 ScafM INDEL 0031.scaffold00123 1030913 1 . T scaffold16270 ScafM SNP 0031.scaffold00123 1030924 1 T C scaffold16270 Both SNP 0031.scaffold00123 1030949 1 T C scaffold16270 Both SNP 0031.scaffold00123 1030957 1 T C scaffold16270 Both SNP 0031.scaffold00123 1030977 1 T C scaffold16270 Both SNP 0031.scaffold00123 1031086 1 T C scaffold16270 Both SNP 0031.scaffold00123 1031178 1 C T scaffold16270 Both SNP 0031.scaffold00123 1031192 1 A T scaffold16270 Both SNP 0031.scaffold00123 1031221 1 C T scaffold16270 Both SNP 0031.scaffold00123 1031261 1 A G scaffold16270 Both SNP 0031.scaffold00123 1031498 1 T C scaffold16270 Both SNP 0031.scaffold00123 1031504 1 C T scaffold16270 ReadM SNP 0031.scaffold00123 1031824 1 C T - Both SNP 0031.scaffold00123 1032238 1 A C scaffold16270 ScafM SNP 0031.scaffold00123 1032308 1 T C scaffold16270 ScafM SNP 0031.scaffold00123 1032656 1 T A scaffold16270 ScafM SNP 0031.scaffold00123 1032711 1 C T scaffold16270 ScafM SNP 0031.scaffold00123 1032759 1 C G scaffold16270 ScafM SNP 0031.scaffold00123 1032839 1 G T scaffold16270 ScafM INDEL 0031.scaffold00123 1032850 1 . A scaffold16270 ScafM SNP 0031.scaffold00123 1032918 1 A G scaffold16270 ScafM INDEL 0031.scaffold00123 1033027 1 T . scaffold16270 ScafM INDEL 0031.scaffold00123 1033056 9 AGAAATTTA ......... scaffold16270 ScafM SNP 0031.scaffold00123 1033175 1 G A scaffold16270 Both SNP 0031.scaffold00123 1033275 1 A G scaffold16270 ScafM SNP 0031.scaffold00123 1033346 1 A T scaffold16270 ScafM SNP 0031.scaffold00123 1033365 1 C G scaffold16270 ScafM SNP 0031.scaffold00123 1033372 1 G C scaffold16270 ScafM SNP 0031.scaffold00123 1033494 1 T A scaffold16270 ScafM SNP 0031.scaffold00123 1033545 1 C G scaffold16270 ScafM SNP 0031.scaffold00123 1033585 1 G T scaffold16270 Both SNP 0031.scaffold00123 1033673 1 T C scaffold16270 Both SNP 0031.scaffold00123 1033714 1 C A scaffold16270 Both SNP 0031.scaffold00123 1033745 1 T G scaffold16270 Both SNP 0031.scaffold00123 1033771 1 G A scaffold16270 Both SNP 0031.scaffold00123 1033808 1 C A scaffold16270 Both SNP 0031.scaffold00123 1034013 1 T G scaffold16270 Both SNP 0031.scaffold00123 1034090 1 A T scaffold16270 Both SNP 0031.scaffold00123 1034154 1 A G scaffold16270 Both SNP 0031.scaffold00123 1034229 1 G A scaffold16270 Both SNP 0031.scaffold00123 1034281 1 G A scaffold16270 Both SNP 0031.scaffold00123 1034289 1 A G scaffold16270 Both INDEL 0031.scaffold00123 1034339 2 AA .. scaffold16270 Both SNP 0031.scaffold00123 1034431 1 T A scaffold16270 Both SNP 0031.scaffold00123 1034482 1 A G scaffold16270 Both SNP 0031.scaffold00123 1034542 1 T C scaffold16270 Both SNP 0031.scaffold00123 1034595 1 T A scaffold16270 Both SNP 0031.scaffold00123 1034687 1 A C scaffold16270 ReadM SNP 0031.scaffold00123 1034791 1 C T - ReadM SNP 0031.scaffold00123 1034896 2 CC GT - ReadM INDEL 0031.scaffold00123 1035035 1 . A - Both SNP 0031.scaffold00123 1035107 1 G A scaffold16270 Both SNP 0031.scaffold00123 1035176 1 G T scaffold16270 Both SNP 0031.scaffold00123 1035351 1 A C scaffold16270 Both SNP 0031.scaffold00123 1035616 1 C T scaffold16270 ScafM SNP 0031.scaffold00123 1035754 1 G T scaffold16270 ScafM SNP 0031.scaffold00123 1035761 1 A G scaffold16270 ScafM SNP 0031.scaffold00123 1035764 1 T C scaffold16270 ScafM SNP 0031.scaffold00123 1035773 1 A G scaffold16270 ScafM SNP 0031.scaffold00123 1035782 1 C T scaffold16270 ScafM SNP 0031.scaffold00123 1035784 2 GT AC scaffold16270 Both INDEL 0031.scaffold00123 1036130 1 A . scaffold16270 Both SNP 0031.scaffold00123 1036311 1 A G scaffold16270 Both SNP 0031.scaffold00123 1036320 1 G A scaffold16270 Both SNP 0031.scaffold00123 1036389 1 G A scaffold16270 ScafM INDEL 0031.scaffold00123 1036412 52 .................................................... GGTAGTGCAGGCAAAAAAGTAAAACGAGTAGCATTGATTCTTGTTTAGAGTT scaffold16270 ScafM SNP 0031.scaffold00123 1036431 1 A G scaffold16270 Both SNP 0031.scaffold00123 1036567 1 G T scaffold16270 Both INDEL 0031.scaffold00123 1036577 1 . G scaffold16270 ScafM SNP 0031.scaffold00123 1036757 1 T C scaffold16270 Both SNP 0031.scaffold00123 1036805 1 T A scaffold16270 ReadM INDEL 0031.scaffold00123 1036903 1 A . - ReadM SNP 0031.scaffold00123 1037053 1 G T - ReadM SNP 0031.scaffold00123 1037119 1 C T - ReadM INDEL 0031.scaffold00123 1037187 1 T . - ReadM INDEL 0031.scaffold00123 1037236 2 TC .. - ReadM SNP 0031.scaffold00123 1037260 1 T C - ReadM INDEL 0031.scaffold00123 1037432 2 .. AT - ReadM SNP 0031.scaffold00123 1037506 1 G A - ReadM SNP 0031.scaffold00123 1037558 1 C T - ReadM INDEL 0031.scaffold00123 1037571 1 . T - ReadM SNP 0031.scaffold00123 1037608 1 T A - Both SNP 0031.scaffold00123 1037689 1 G A scaffold16270 Both SNP 0031.scaffold00123 1038257 1 C T scaffold16270 Both SNP 0031.scaffold00123 1038289 1 A T scaffold16270 Both SNP 0031.scaffold00123 1038388 1 T A scaffold16270 Both SNP 0031.scaffold00123 1038410 1 C A scaffold16270 Both SNP 0031.scaffold00123 1038492 1 G A scaffold16270 Both SNP 0031.scaffold00123 1038552 1 A T scaffold16270 Both SNP 0031.scaffold00123 1038735 1 A G scaffold16270 ScafM INDEL 0031.scaffold00123 1038865 2 .. TT scaffold16270 Both SNP 0031.scaffold00123 1038881 1 C T scaffold16270 Both SNP 0031.scaffold00123 1039323 1 G A scaffold16270 Both SNP 0031.scaffold00123 1039365 1 G A scaffold16270 Both SNP 0031.scaffold00123 1039491 1 A C scaffold16270 Both SNP 0031.scaffold00123 1039521 1 A G scaffold16270 ScafM SNP 0031.scaffold00123 1039582 2 AT GA scaffold16270 Both SNP 0031.scaffold00123 1039617 1 T A scaffold16270 Both SNP 0031.scaffold00123 1039737 1 C T scaffold16270 Both SNP 0031.scaffold00123 1039822 1 A G scaffold16270 Both SNP 0031.scaffold00123 1039882 1 T C scaffold16270 Both SNP 0031.scaffold00123 1039913 1 C T scaffold16270 Both SNP 0031.scaffold00123 1039926 1 C T scaffold16270 Both SNP 0031.scaffold00123 1039953 1 C T scaffold16270 Both SNP 0031.scaffold00123 1040000 1 T C scaffold16270 Both SNP 0031.scaffold00123 1040054 1 A T scaffold16270 Both SNP 0031.scaffold00123 1040066 1 C A scaffold16270 Both SNP 0031.scaffold00123 1040094 1 A G scaffold16270 Both SNP 0031.scaffold00123 1040111 1 G A scaffold16270 Both SNP 0031.scaffold00123 1040174 1 T C scaffold16270 Both SNP 0031.scaffold00123 1040352 1 G A scaffold16270 Both SNP 0031.scaffold00123 1040413 1 T C scaffold16270 ReadM SNP 0031.scaffold00123 1040655 1 A G - ReadM SNP 0031.scaffold00123 1040773 1 T G - ReadM SNP 0031.scaffold00123 1040822 1 T A - ReadM SNP 0031.scaffold00123 1040922 1 C T - ReadM SNP 0031.scaffold00123 1041120 1 C T - ReadM SNP 0031.scaffold00123 1041326 1 A G - ScafM SNP 0031.scaffold00123 1042931 1 G A scaffold16270 ScafM SNP 0031.scaffold00123 1042944 1 C T scaffold16270 ScafM SNP 0031.scaffold00123 1043035 1 T G scaffold16270 ReadM SNP 0031.scaffold00123 1043434 1 C T - ReadM SNP 0031.scaffold00123 1043455 1 G A - Both SNP 0031.scaffold00123 1043516 1 G T scaffold16270 Both SNP 0031.scaffold00123 1043536 1 C A scaffold16270 ReadM SNP 0031.scaffold00123 1043630 1 A G - ReadM SNP 0031.scaffold00123 1043708 1 A G - ReadM SNP 0031.scaffold00123 1043715 1 C A - ReadM SNP 0031.scaffold00123 1043747 1 C T - ReadM SNP 0031.scaffold00123 1043771 1 G A - ReadM SNP 0031.scaffold00123 1043806 1 T C - Both SNP 0031.scaffold00123 1043865 1 C T scaffold16270 Both SNP 0031.scaffold00123 1043929 1 C G scaffold16270 Both SNP 0031.scaffold00123 1043941 1 A G scaffold16270 Both SNP 0031.scaffold00123 1043973 1 C T scaffold16270 Both SNP 0031.scaffold00123 1044319 1 T C scaffold16270 Both SNP 0031.scaffold00123 1044425 1 T C scaffold16270 Both INDEL 0031.scaffold00123 1044509 2 AT .. scaffold16270 Both SNP 0031.scaffold00123 1044570 1 T G scaffold16270 Both SNP 0031.scaffold00123 1044590 1 T C scaffold16270 Both SNP 0031.scaffold00123 1044600 1 G A scaffold16270 Both SNP 0031.scaffold00123 1044627 1 C T scaffold16270 ScafM INDEL 0031.scaffold00123 1044693 1 T . scaffold16270 ScafM INDEL 0031.scaffold00123 1044696 1 A . scaffold16270 Both SNP 0031.scaffold00123 1044787 1 T C scaffold16270 Both SNP 0031.scaffold00123 1044806 1 G T scaffold16270 Both SNP 0031.scaffold00123 1044814 1 T C scaffold16270 Both SNP 0031.scaffold00123 1045063 1 G C scaffold16270 Both SNP 0031.scaffold00123 1045095 1 A G scaffold16270 Both SNP 0031.scaffold00123 1045129 1 A G scaffold16270 Both SNP 0031.scaffold00123 1045151 1 A G scaffold16270 Both SNP 0031.scaffold00123 1045200 1 G T scaffold16270 ReadM SNP 0031.scaffold00123 1045259 1 T G - ReadM SNP 0031.scaffold00123 1045269 1 T A - ReadM SNP 0031.scaffold00123 1045326 1 T A - ReadM SNP 0031.scaffold00123 1045371 1 A C - ReadM SNP 0031.scaffold00123 1045391 1 A G - ReadM SNP 0031.scaffold00123 1045405 1 C T - ReadM SNP 0031.scaffold00123 1045475 1 G A - ReadM SNP 0031.scaffold00123 1045781 1 C T - ReadM SNP 0031.scaffold00123 1045785 1 G A - ReadM SNP 0031.scaffold00123 1045869 1 T G - ReadM SNP 0031.scaffold00123 1045882 1 T C - ReadM SNP 0031.scaffold00123 1045983 1 A G - ReadM SNP 0031.scaffold00123 1046474 1 A G - ReadM INDEL 0031.scaffold00123 1046887 1 . C - ReadM SNP 0031.scaffold00123 1046939 1 C T - ReadM SNP 0031.scaffold00123 1047460 1 T C - ReadM SNP 0031.scaffold00123 1047625 1 T C - ReadM SNP 0031.scaffold00123 1049751 1 T C - ReadM SNP 0031.scaffold00123 1049861 1 T C - ReadM SNP 0031.scaffold00123 1050133 1 A C - ScafM INDEL 0031.scaffold00123 1051104 1 . A scaffold23334 ScafM SNP 0031.scaffold00123 1051106 1 T A scaffold23334 ReadM SNP 0031.scaffold00123 1051136 1 A G - ScafM INDEL 0031.scaffold00123 1051667 10 .......... GTAACAGAAG scaffold18363 ScafM INDEL 0031.scaffold00123 1051669 8 ........ AATAGCCA scaffold18363 Both SNP 0031.scaffold00123 1052082 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1052450 1 C A scaffold18363 Both SNP 0031.scaffold00123 1053217 1 C T scaffold18363 Both INDEL 0031.scaffold00123 1053499 1 A . scaffold18363 ScafM INDEL 0031.scaffold00123 1053586 1 . T scaffold18363 Both SNP 0031.scaffold00123 1053734 1 A G scaffold18363 Both SNP 0031.scaffold00123 1053749 1 G C scaffold18363 Both SNP 0031.scaffold00123 1053903 1 A C scaffold18363 Both SNP 0031.scaffold00123 1054203 1 A T scaffold18363 Both SNP 0031.scaffold00123 1054244 1 A G scaffold18363 Both SNP 0031.scaffold00123 1054478 1 T C scaffold18363 Both SNP 0031.scaffold00123 1054698 1 C T scaffold18363 Both SNP 0031.scaffold00123 1054926 1 C T scaffold18363 Both SNP 0031.scaffold00123 1055136 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1055207 5 CCTGT ..... scaffold18363 ScafM SNP 0031.scaffold00123 1055249 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1055255 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1055542 1 C T scaffold18363 ReadM SNP 0031.scaffold00123 1055726 1 A G - Both SNP 0031.scaffold00123 1055766 1 A T scaffold18363 Both SNP 0031.scaffold00123 1055928 1 A G scaffold18363 ReadM INDEL 0031.scaffold00123 1056000 1 C . - ReadM SNP 0031.scaffold00123 1056102 1 G A - Both SNP 0031.scaffold00123 1056244 1 C T scaffold18363 Both SNP 0031.scaffold00123 1056390 1 A G scaffold18363 Both SNP 0031.scaffold00123 1056423 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1056646 2 AG CA scaffold18363 ScafM INDEL 0031.scaffold00123 1056666 1 . A scaffold18363 ScafM SNP 0031.scaffold00123 1056671 1 T C scaffold18363 Both INDEL 0031.scaffold00123 1056927 1 A . scaffold18363 Both INDEL 0031.scaffold00123 1057333 1 . G scaffold18363 Both SNP 0031.scaffold00123 1057540 1 A G scaffold18363 Both SNP 0031.scaffold00123 1057590 1 T C scaffold18363 Both SNP 0031.scaffold00123 1057766 1 G A scaffold18363 Both SNP 0031.scaffold00123 1057898 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1057914 1 C T scaffold18363 Both SNP 0031.scaffold00123 1058108 1 C A scaffold18363 Both SNP 0031.scaffold00123 1058116 1 A T scaffold18363 Both SNP 0031.scaffold00123 1058535 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1058870 5 TAAAA ..... scaffold18363 ScafM INDEL 0031.scaffold00123 1058876 1 G . scaffold18363 ScafM INDEL 0031.scaffold00123 1059003 1 . A scaffold18363 Both SNP 0031.scaffold00123 1059081 1 T G scaffold18363 Both SNP 0031.scaffold00123 1059107 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1059214 1 T G scaffold18363 ReadM SNP 0031.scaffold00123 1059371 1 C T - ReadM SNP 0031.scaffold00123 1059383 1 C G - ReadM SNP 0031.scaffold00123 1059409 1 A G - ReadM SNP 0031.scaffold00123 1059434 1 G A - ReadM SNP 0031.scaffold00123 1059464 1 G T - ReadM SNP 0031.scaffold00123 1059479 1 A G - Both INDEL 0031.scaffold00123 1059560 1 G . scaffold18363 Both INDEL 0031.scaffold00123 1059702 1 . T scaffold18363 ScafM SNP 0031.scaffold00123 1059711 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1059725 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1059727 1 G A scaffold18363 Both SNP 0031.scaffold00123 1059751 1 A G scaffold18363 Both SNP 0031.scaffold00123 1059837 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1059946 1 T A scaffold18363 ScafM INDEL 0031.scaffold00123 1059962 8 ........ TGAGAACT scaffold18363 Both SNP 0031.scaffold00123 1060039 1 G T scaffold18363 Both SNP 0031.scaffold00123 1060086 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1060242 1 T G scaffold18363 Both SNP 0031.scaffold00123 1060388 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1060392 1 G A scaffold18363 Both SNP 0031.scaffold00123 1060395 1 A T scaffold18363 Both SNP 0031.scaffold00123 1060521 1 C T scaffold18363 Both SNP 0031.scaffold00123 1060588 1 G A scaffold18363 Both SNP 0031.scaffold00123 1060665 1 T C scaffold18363 Both SNP 0031.scaffold00123 1060730 1 C A scaffold18363 Both SNP 0031.scaffold00123 1060835 1 C A scaffold18363 Both SNP 0031.scaffold00123 1060919 1 T G scaffold18363 Both SNP 0031.scaffold00123 1060964 1 A T scaffold18363 ReadM INDEL 0031.scaffold00123 1061326 1 A . - ReadM SNP 0031.scaffold00123 1061358 1 G A - ReadM SNP 0031.scaffold00123 1061364 1 C T - Both SNP 0031.scaffold00123 1061392 1 T G scaffold18363 ReadM INDEL 0031.scaffold00123 1061519 1 . G - ScafM SNP 0031.scaffold00123 1061643 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1061832 1 A . scaffold18363 Both INDEL 0031.scaffold00123 1061919 1 . T scaffold18363 Both SNP 0031.scaffold00123 1061937 1 C G scaffold18363 Both SNP 0031.scaffold00123 1062058 1 G A scaffold18363 Both INDEL 0031.scaffold00123 1062136 1 T . scaffold18363 Both SNP 0031.scaffold00123 1062226 1 T C scaffold18363 Both SNP 0031.scaffold00123 1062479 1 T A scaffold18363 Both SNP 0031.scaffold00123 1062590 1 T C scaffold18363 Both SNP 0031.scaffold00123 1062725 1 T G scaffold18363 Both SNP 0031.scaffold00123 1062755 1 G T scaffold18363 Both SNP 0031.scaffold00123 1063096 1 T G scaffold18363 ReadM INDEL 0031.scaffold00123 1063223 1 A . - Both SNP 0031.scaffold00123 1063465 1 G C scaffold18363 Both SNP 0031.scaffold00123 1063872 1 A G scaffold18363 Both SNP 0031.scaffold00123 1063932 1 T G scaffold18363 Both SNP 0031.scaffold00123 1063959 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1064305 1 T A scaffold18363 ScafM INDEL 0031.scaffold00123 1064316 3 TGA ... scaffold18363 ScafM INDEL 0031.scaffold00123 1064356 1 . C scaffold18363 ScafM INDEL 0031.scaffold00123 1064358 1 . C scaffold18363 ScafM INDEL 0031.scaffold00123 1064401 5 TTTCT ..... scaffold18363 Both SNP 0031.scaffold00123 1064633 1 C A scaffold18363 Both SNP 0031.scaffold00123 1064754 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1064852 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1064983 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1064991 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1065015 2 AG CT scaffold18363 ScafM SNP 0031.scaffold00123 1065025 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1065054 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1068201 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068213 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1068225 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1068228 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068236 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1068240 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1068282 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1068307 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1068315 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1068325 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1068329 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1068347 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1068353 1 . C scaffold18363 ScafM INDEL 0031.scaffold00123 1068356 1 A . scaffold18363 ScafM SNP 0031.scaffold00123 1068359 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068369 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1068388 2 CA TG scaffold18363 ScafM SNP 0031.scaffold00123 1068393 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1068410 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068421 2 CG AA scaffold18363 ScafM SNP 0031.scaffold00123 1068443 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1068463 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1068504 3 ... TAT scaffold18363 ScafM SNP 0031.scaffold00123 1068508 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1068514 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068522 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1068542 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1068554 1 . T scaffold18363 ScafM INDEL 0031.scaffold00123 1068558 1 A . scaffold18363 ScafM SNP 0031.scaffold00123 1068576 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1068602 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1068609 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1068624 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1068631 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1068641 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1068651 2 .. GT scaffold18363 ScafM SNP 0031.scaffold00123 1068662 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068666 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1068670 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1068687 1 G A scaffold18363 Both SNP 0031.scaffold00123 1068778 1 T C scaffold18363 ReadM SNP 0031.scaffold00123 1068800 1 T A - ReadM SNP 0031.scaffold00123 1068832 1 T C - ReadM SNP 0031.scaffold00123 1068926 1 C G - ReadM SNP 0031.scaffold00123 1068966 1 G C - ReadM SNP 0031.scaffold00123 1068969 1 T C - ReadM SNP 0031.scaffold00123 1069149 1 G T - Both SNP 0031.scaffold00123 1069366 1 A C scaffold18363 Both SNP 0031.scaffold00123 1069426 1 G A scaffold18363 Both SNP 0031.scaffold00123 1069466 1 G A scaffold18363 Both INDEL 0031.scaffold00123 1069491 1 . A scaffold18363 Both SNP 0031.scaffold00123 1069521 1 A G scaffold18363 Both SNP 0031.scaffold00123 1069587 1 C A scaffold18363 Both SNP 0031.scaffold00123 1069600 1 T G scaffold18363 Both SNP 0031.scaffold00123 1069647 1 T C scaffold18363 Both SNP 0031.scaffold00123 1069808 1 A G scaffold18363 Both SNP 0031.scaffold00123 1070096 1 A T scaffold18363 Both SNP 0031.scaffold00123 1070105 1 A C scaffold18363 Both SNP 0031.scaffold00123 1070179 1 C T scaffold18363 Both SNP 0031.scaffold00123 1070236 1 T G scaffold18363 Both SNP 0031.scaffold00123 1070300 1 T C scaffold18363 Both SNP 0031.scaffold00123 1070444 1 T G scaffold18363 Both SNP 0031.scaffold00123 1070531 1 G A scaffold18363 Both SNP 0031.scaffold00123 1070638 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1070659 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1070662 2 AA GT scaffold18363 ScafM SNP 0031.scaffold00123 1070667 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1070673 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1070688 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1070708 8 ........ TCAGGTGA scaffold18363 ScafM SNP 0031.scaffold00123 1070722 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1070725 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1070736 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1070748 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1070751 1 G . scaffold18363 ScafM SNP 0031.scaffold00123 1070795 1 C G scaffold18363 ScafM INDEL 0031.scaffold00123 1070827 1 G . scaffold18363 Both INDEL 0031.scaffold00123 1070849 1 T . scaffold18363 Both SNP 0031.scaffold00123 1071054 1 C G scaffold18363 Both SNP 0031.scaffold00123 1071102 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1071134 1 C A scaffold18363 ScafM INDEL 0031.scaffold00123 1071140 9 ......... AAAAAAAAA scaffold18363 Both SNP 0031.scaffold00123 1071177 1 G A scaffold18363 Both SNP 0031.scaffold00123 1071186 1 G A scaffold18363 Both SNP 0031.scaffold00123 1071261 1 A T scaffold18363 Both INDEL 0031.scaffold00123 1071314 1 A . scaffold18363 Both SNP 0031.scaffold00123 1071333 1 A G scaffold18363 Both SNP 0031.scaffold00123 1071406 1 G A scaffold18363 Both SNP 0031.scaffold00123 1071429 1 G A scaffold18363 Both SNP 0031.scaffold00123 1071435 1 T A scaffold18363 Both SNP 0031.scaffold00123 1071466 1 C T scaffold18363 Both SNP 0031.scaffold00123 1071678 1 A T scaffold18363 Both SNP 0031.scaffold00123 1071696 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1071723 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1071731 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1071786 1 G C scaffold18363 ScafM INDEL 0031.scaffold00123 1071789 2 .C TG scaffold18363 Both SNP 0031.scaffold00123 1071834 1 G T scaffold18363 Both SNP 0031.scaffold00123 1071878 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1071903 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1071915 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1071918 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1071947 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1072012 2 TA AG scaffold18363 Both INDEL 0031.scaffold00123 1072022 1 . A scaffold18363 ScafM INDEL 0031.scaffold00123 1072092 2 AA .. scaffold18363 ScafM SNP 0031.scaffold00123 1072098 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1072118 2 TC GA scaffold18363 ScafM SNP 0031.scaffold00123 1072140 1 T G scaffold18363 ScafM INDEL 0031.scaffold00123 1072161 7 ATTTCTG ....... scaffold18363 ScafM SNP 0031.scaffold00123 1072193 1 A C scaffold18363 ScafM INDEL 0031.scaffold00123 1072206 1 . T scaffold18363 ScafM INDEL 0031.scaffold00123 1072250 1 . A scaffold18363 ScafM SNP 0031.scaffold00123 1072259 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1072264 2 TC AG scaffold18363 ScafM SNP 0031.scaffold00123 1072283 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1072357 2 TC CA scaffold18363 Both SNP 0031.scaffold00123 1072378 1 C G scaffold18363 Both SNP 0031.scaffold00123 1072393 1 C G scaffold18363 Both SNP 0031.scaffold00123 1072409 1 G T scaffold18363 Both INDEL 0031.scaffold00123 1072482 1 . T scaffold18363 Both SNP 0031.scaffold00123 1072534 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1072584 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1072588 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1072602 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1072609 1 A C scaffold18363 Both SNP 0031.scaffold00123 1072770 1 A C scaffold18363 Both SNP 0031.scaffold00123 1072773 1 A G scaffold18363 Both SNP 0031.scaffold00123 1072776 1 G T scaffold18363 Both SNP 0031.scaffold00123 1072869 1 A C scaffold18363 Both SNP 0031.scaffold00123 1072916 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1072947 2 CC AT scaffold18363 ReadM SNP 0031.scaffold00123 1073175 1 A T - ReadM INDEL 0031.scaffold00123 1073180 1 . A - Both SNP 0031.scaffold00123 1073280 1 T A scaffold18363 Both SNP 0031.scaffold00123 1073301 1 T G scaffold18363 Both SNP 0031.scaffold00123 1073321 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1073339 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1073372 1 A C scaffold18363 Both SNP 0031.scaffold00123 1073579 2 CC TT scaffold18363 ScafM SNP 0031.scaffold00123 1073639 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1073815 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1073843 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1073849 1 C T scaffold18363 Both SNP 0031.scaffold00123 1073888 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1073936 1 C T scaffold18363 ReadM INDEL 0031.scaffold00123 1074050 1 T . - ReadM SNP 0031.scaffold00123 1074148 1 G A - ReadM SNP 0031.scaffold00123 1074164 1 G A - ReadM SNP 0031.scaffold00123 1074219 1 C A - ReadM SNP 0031.scaffold00123 1074287 1 T C - ReadM SNP 0031.scaffold00123 1074395 1 A C - Both SNP 0031.scaffold00123 1074399 1 C A scaffold18363 ScafM INDEL 0031.scaffold00123 1074445 4 .... AATT scaffold18363 ScafM SNP 0031.scaffold00123 1074465 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1074488 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1074504 1 . A scaffold18363 ScafM SNP 0031.scaffold00123 1074510 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1074537 1 . A scaffold18363 Both SNP 0031.scaffold00123 1074598 1 G A scaffold18363 Both SNP 0031.scaffold00123 1074619 1 T C scaffold18363 Both SNP 0031.scaffold00123 1074795 1 C T scaffold18363 Both SNP 0031.scaffold00123 1074832 1 G A scaffold18363 Both SNP 0031.scaffold00123 1074837 1 G A scaffold18363 Both SNP 0031.scaffold00123 1074887 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1074926 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1074939 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1074941 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1074957 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1074985 1 T A scaffold18363 ScafM INDEL 0031.scaffold00123 1075016 4 TACG .... scaffold18363 ScafM INDEL 0031.scaffold00123 1075036 1 . A scaffold18363 ScafM SNP 0031.scaffold00123 1075058 1 A C scaffold18363 ScafM INDEL 0031.scaffold00123 1075070 4 ...A GTCG scaffold18363 ScafM SNP 0031.scaffold00123 1075084 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1075100 1 A . scaffold18363 ScafM SNP 0031.scaffold00123 1075103 1 G C scaffold18363 ScafM INDEL 0031.scaffold00123 1075187 4 .... TATA scaffold18363 ScafM SNP 0031.scaffold00123 1075225 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1075237 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1075243 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1075251 1 . G scaffold18363 ScafM SNP 0031.scaffold00123 1075265 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1075272 1 A C scaffold18363 Both INDEL 0031.scaffold00123 1075358 2 .. CA scaffold18363 Both SNP 0031.scaffold00123 1075411 1 A G scaffold18363 Both SNP 0031.scaffold00123 1075431 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1075479 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1075481 1 T G scaffold18363 ScafM INDEL 0031.scaffold00123 1075484 3 ... TTT scaffold18363 ScafM SNP 0031.scaffold00123 1075517 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1075521 1 G T scaffold18363 ScafM INDEL 0031.scaffold00123 1075525 2 .. CA scaffold18363 ScafM SNP 0031.scaffold00123 1075572 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1075575 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1075594 1 C T scaffold18363 Both SNP 0031.scaffold00123 1075630 1 C T scaffold18363 Both SNP 0031.scaffold00123 1075683 1 G C scaffold18363 Both SNP 0031.scaffold00123 1075692 1 T C scaffold18363 Both SNP 0031.scaffold00123 1075743 1 C T scaffold18363 ReadM SNP 0031.scaffold00123 1075781 1 C T - ScafM SNP 0031.scaffold00123 1075910 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1075923 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1075928 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1075937 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1075955 1 T C scaffold18363 Both SNP 0031.scaffold00123 1075982 1 C T scaffold18363 Both SNP 0031.scaffold00123 1076024 1 A T scaffold18363 Both SNP 0031.scaffold00123 1076079 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1076103 1 T A scaffold18363 Both SNP 0031.scaffold00123 1076148 1 A C scaffold18363 Both SNP 0031.scaffold00123 1076266 2 AA GC scaffold18363 Both SNP 0031.scaffold00123 1076280 1 C T scaffold18363 Both SNP 0031.scaffold00123 1076316 1 A G scaffold18363 Both SNP 0031.scaffold00123 1076333 1 C T scaffold18363 Both SNP 0031.scaffold00123 1076439 1 A G scaffold18363 Both SNP 0031.scaffold00123 1076445 1 T G scaffold18363 Both SNP 0031.scaffold00123 1076514 1 T C scaffold18363 Both SNP 0031.scaffold00123 1076608 1 G T scaffold18363 Both SNP 0031.scaffold00123 1076666 1 T C scaffold18363 Both SNP 0031.scaffold00123 1076803 1 C T scaffold18363 Both SNP 0031.scaffold00123 1076858 1 T C scaffold18363 Both SNP 0031.scaffold00123 1076881 1 T A scaffold18363 Both SNP 0031.scaffold00123 1077003 1 G A scaffold18363 Both SNP 0031.scaffold00123 1077009 1 C T scaffold18363 Both SNP 0031.scaffold00123 1077081 1 A G scaffold18363 Both SNP 0031.scaffold00123 1077088 1 A C scaffold18363 Both INDEL 0031.scaffold00123 1077112 1 . C scaffold18363 ScafM SNP 0031.scaffold00123 1077183 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1077214 4 .... TTGA scaffold18363 ScafM SNP 0031.scaffold00123 1077240 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1077253 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1077266 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1077284 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1077382 4 CGTG .... scaffold18363 ScafM INDEL 0031.scaffold00123 1077401 3 ... GAC scaffold18363 ReadM SNP 0031.scaffold00123 1077497 1 A T - ReadM SNP 0031.scaffold00123 1077563 1 A G - ScafM SNP 0031.scaffold00123 1077724 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1077729 1 C . scaffold18363 ScafM INDEL 0031.scaffold00123 1077731 1 C . scaffold18363 ScafM SNP 0031.scaffold00123 1077733 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1077736 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1077738 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1077741 2 CC AA scaffold18363 ScafM INDEL 0031.scaffold00123 1077746 1 G . scaffold18363 ScafM INDEL 0031.scaffold00123 1077749 2 AG .. scaffold18363 ScafM INDEL 0031.scaffold00123 1077753 1 G . scaffold18363 ScafM INDEL 0031.scaffold00123 1077755 1 C . scaffold18363 ScafM SNP 0031.scaffold00123 1077766 2 CG TC scaffold18363 ScafM SNP 0031.scaffold00123 1077814 1 T G scaffold18363 Both SNP 0031.scaffold00123 1077876 1 A G scaffold18363 Both SNP 0031.scaffold00123 1077923 1 A T scaffold18363 Both SNP 0031.scaffold00123 1077930 1 C T scaffold18363 Both SNP 0031.scaffold00123 1077994 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078020 2 TA AT scaffold18363 ScafM SNP 0031.scaffold00123 1078050 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078092 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078107 1 T A scaffold18363 Both SNP 0031.scaffold00123 1078132 1 G A scaffold18363 Both SNP 0031.scaffold00123 1078149 1 T C scaffold18363 Both SNP 0031.scaffold00123 1078208 1 T C scaffold18363 Both SNP 0031.scaffold00123 1078288 1 G C scaffold18363 Both SNP 0031.scaffold00123 1078361 1 G C scaffold18363 Both SNP 0031.scaffold00123 1078397 1 C G scaffold18363 Both SNP 0031.scaffold00123 1078431 1 A T scaffold18363 Both SNP 0031.scaffold00123 1078439 1 G A scaffold18363 Both SNP 0031.scaffold00123 1078540 1 A C scaffold18363 Both SNP 0031.scaffold00123 1078554 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078590 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1078600 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078602 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078638 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1078648 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1078679 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1078684 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1078716 1 . T scaffold18363 ScafM SNP 0031.scaffold00123 1078722 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1078730 1 G C scaffold18363 Both SNP 0031.scaffold00123 1078754 1 G A scaffold18363 Both SNP 0031.scaffold00123 1078779 1 A G scaffold18363 Both INDEL 0031.scaffold00123 1078801 1 . G scaffold18363 Both SNP 0031.scaffold00123 1078858 1 A G scaffold18363 Both SNP 0031.scaffold00123 1078890 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1078907 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1078920 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1079154 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1079176 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1079205 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1079210 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1079251 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1079257 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1079264 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1079290 3 CTT ... scaffold18363 ScafM INDEL 0031.scaffold00123 1079318 2 .. AC scaffold18363 ScafM INDEL 0031.scaffold00123 1079321 1 . C scaffold18363 ScafM SNP 0031.scaffold00123 1079361 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079395 2 CG AA scaffold18363 ScafM SNP 0031.scaffold00123 1079429 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1079441 8 AGGACACC ........ scaffold18363 ScafM INDEL 0031.scaffold00123 1079451 1 G . scaffold18363 ScafM SNP 0031.scaffold00123 1079454 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1079475 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1079520 1 A . scaffold18363 ScafM SNP 0031.scaffold00123 1079531 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1079556 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079572 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1079591 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1079595 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1079600 1 A T scaffold18363 ScafM INDEL 0031.scaffold00123 1079607 3 ... AAA scaffold18363 ScafM SNP 0031.scaffold00123 1079617 1 G A scaffold18363 Both SNP 0031.scaffold00123 1079679 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079714 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1079758 1 T A scaffold18363 ScafM INDEL 0031.scaffold00123 1079762 1 . T scaffold18363 ScafM SNP 0031.scaffold00123 1079787 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1079792 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1079794 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1079798 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079857 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1079880 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1079913 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1079917 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1079926 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079942 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1079968 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1079973 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1079989 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1080107 2 .. AA scaffold18363 ScafM SNP 0031.scaffold00123 1080169 2 GG AA scaffold18363 ScafM SNP 0031.scaffold00123 1080197 2 CG GA scaffold18363 ScafM SNP 0031.scaffold00123 1080216 1 G A scaffold18363 Both SNP 0031.scaffold00123 1080301 1 A G scaffold18363 Both SNP 0031.scaffold00123 1080336 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1080361 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1080366 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1080383 1 A G scaffold18363 Both SNP 0031.scaffold00123 1080433 1 A G scaffold18363 Both SNP 0031.scaffold00123 1080501 1 C A scaffold18363 ScafM INDEL 0031.scaffold00123 1080502 2 .. AA scaffold18363 ScafM SNP 0031.scaffold00123 1080511 1 C A scaffold18363 Both SNP 0031.scaffold00123 1080642 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1080656 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1080666 2 CA AT scaffold18363 ScafM INDEL 0031.scaffold00123 1080698 3 AAC ... scaffold18363 ScafM SNP 0031.scaffold00123 1080712 1 G T scaffold18363 ScafM INDEL 0031.scaffold00123 1080721 16 CCAAACAGGCCCTACA ................ scaffold18363 ScafM SNP 0031.scaffold00123 1080746 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1080765 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1080788 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1080805 1 G T scaffold18363 ScafM INDEL 0031.scaffold00123 1080813 4 AAGA .... scaffold18363 ScafM SNP 0031.scaffold00123 1080818 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1080823 2 TT .. scaffold18363 ScafM SNP 0031.scaffold00123 1080858 2 AC GA scaffold18363 Both SNP 0031.scaffold00123 1080874 1 A G scaffold18363 Both SNP 0031.scaffold00123 1080901 1 T C scaffold18363 Both SNP 0031.scaffold00123 1080966 1 G A scaffold18363 Both SNP 0031.scaffold00123 1080979 1 C T scaffold18363 Both SNP 0031.scaffold00123 1081018 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1081022 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1081086 2 TC AT scaffold18363 ScafM SNP 0031.scaffold00123 1081136 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1081156 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1081182 1 A . scaffold18363 ScafM SNP 0031.scaffold00123 1081186 1 G A scaffold18363 Both SNP 0031.scaffold00123 1081207 1 A G scaffold18363 Both SNP 0031.scaffold00123 1081225 1 G T scaffold18363 Both INDEL 0031.scaffold00123 1081262 1 C . scaffold18363 Both INDEL 0031.scaffold00123 1081342 1 A . scaffold18363 Both SNP 0031.scaffold00123 1081595 1 T G scaffold18363 Both SNP 0031.scaffold00123 1081601 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1081761 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1081764 1 T A scaffold18363 Both SNP 0031.scaffold00123 1081808 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1082106 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1082110 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1082115 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1082232 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1082241 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1088273 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1088281 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1088355 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1088474 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1088483 1 G A scaffold18363 ReadM SNP 0031.scaffold00123 1088509 1 A G - ReadM SNP 0031.scaffold00123 1088531 1 G A - ReadM SNP 0031.scaffold00123 1089055 1 G T - ScafM SNP 0031.scaffold00123 1091192 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1091277 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1091311 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1091332 1 A G scaffold18363 Both SNP 0031.scaffold00123 1091381 1 C A scaffold18363 Both SNP 0031.scaffold00123 1091412 1 G A scaffold18363 Both SNP 0031.scaffold00123 1091466 1 A G scaffold18363 Both SNP 0031.scaffold00123 1091504 1 G C scaffold18363 Both INDEL 0031.scaffold00123 1091520 1 . C scaffold18363 ReadM SNP 0031.scaffold00123 1091615 1 T A - ReadM SNP 0031.scaffold00123 1091626 1 T C - Both SNP 0031.scaffold00123 1091904 1 T C scaffold18363 Both SNP 0031.scaffold00123 1091982 1 G A scaffold18363 Both SNP 0031.scaffold00123 1092280 1 C T scaffold18363 Both SNP 0031.scaffold00123 1092289 1 T C scaffold18363 ScafM INDEL 0031.scaffold00123 1092462 5 GCTAA ..... scaffold18363 Both SNP 0031.scaffold00123 1092482 1 A T scaffold18363 Both SNP 0031.scaffold00123 1092512 1 T G scaffold18363 Both SNP 0031.scaffold00123 1092582 1 T C scaffold18363 ReadM SNP 0031.scaffold00123 1092655 1 C T - ReadM SNP 0031.scaffold00123 1092750 1 T C - ReadM SNP 0031.scaffold00123 1092899 1 C A - ReadM SNP 0031.scaffold00123 1092974 1 T C - ReadM SNP 0031.scaffold00123 1093365 1 C T - ReadM SNP 0031.scaffold00123 1093579 1 C T - ReadM SNP 0031.scaffold00123 1093720 1 C T - ReadM SNP 0031.scaffold00123 1093811 1 G C - ReadM SNP 0031.scaffold00123 1093949 1 G A - ReadM SNP 0031.scaffold00123 1093995 1 G A - ReadM SNP 0031.scaffold00123 1094174 1 C A - ReadM SNP 0031.scaffold00123 1094215 1 G C - ReadM SNP 0031.scaffold00123 1094307 1 T C - ReadM SNP 0031.scaffold00123 1094457 1 A T - ReadM SNP 0031.scaffold00123 1094487 1 T A - ReadM SNP 0031.scaffold00123 1094610 1 C T - ReadM SNP 0031.scaffold00123 1094655 1 T C - ReadM SNP 0031.scaffold00123 1094927 1 C T - ReadM SNP 0031.scaffold00123 1094982 1 C T - ReadM SNP 0031.scaffold00123 1094993 1 C T - ReadM SNP 0031.scaffold00123 1095082 1 C T - ReadM SNP 0031.scaffold00123 1095165 1 T C - ReadM SNP 0031.scaffold00123 1095261 1 C T - ReadM INDEL 0031.scaffold00123 1095323 1 A . - ReadM SNP 0031.scaffold00123 1095337 1 G A - ReadM SNP 0031.scaffold00123 1095346 1 T C - ReadM SNP 0031.scaffold00123 1095701 1 T A - ReadM SNP 0031.scaffold00123 1095704 1 C A - ScafM SNP 0031.scaffold00123 1096405 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1096448 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1096488 1 . T scaffold18363 ReadM SNP 0031.scaffold00123 1096745 1 G C - Both SNP 0031.scaffold00123 1096853 1 A C scaffold18363 Both INDEL 0031.scaffold00123 1097034 1 . C scaffold18363 Both SNP 0031.scaffold00123 1097043 1 C G scaffold18363 Both SNP 0031.scaffold00123 1097176 1 A G scaffold18363 Both SNP 0031.scaffold00123 1097275 1 G A scaffold18363 Both SNP 0031.scaffold00123 1097278 1 A G scaffold18363 Both SNP 0031.scaffold00123 1097306 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1097358 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1097372 3 ... CAA scaffold18363 ScafM INDEL 0031.scaffold00123 1097376 4 .... CGAT scaffold18363 Both SNP 0031.scaffold00123 1097404 1 T C scaffold18363 Both SNP 0031.scaffold00123 1097408 1 A G scaffold18363 ReadM SNP 0031.scaffold00123 1097534 1 T C - ReadM SNP 0031.scaffold00123 1097858 1 T C - ReadM INDEL 0031.scaffold00123 1097883 2 .. CT - ScafM SNP 0031.scaffold00123 1098208 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1098228 1 G A scaffold18363 Both SNP 0031.scaffold00123 1098235 1 G C scaffold18363 Both INDEL 0031.scaffold00123 1098314 1 T . scaffold18363 ReadM INDEL 0031.scaffold00123 1098338 1 . A - Both SNP 0031.scaffold00123 1098712 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1098739 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1098758 69 ..................................................................... GGCCCGATTTACTCCTATAAATTGCTCCTATTCCTGCATGAAGGTTAGTAATGCAAAGGAGGCATCTAC scaffold18363 Both SNP 0031.scaffold00123 1099124 1 A G scaffold18363 Both SNP 0031.scaffold00123 1099154 1 C T scaffold18363 Both SNP 0031.scaffold00123 1099221 1 C T scaffold18363 Both SNP 0031.scaffold00123 1099456 1 G T scaffold18363 Both SNP 0031.scaffold00123 1099553 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1099613 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1099619 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1099730 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1099753 33 ATTTTTTTTTTTTTTGGTAAACAGTGGAACAAG ................................. scaffold18363 Both SNP 0031.scaffold00123 1099812 1 G A scaffold18363 Both SNP 0031.scaffold00123 1099833 1 A G scaffold18363 Both SNP 0031.scaffold00123 1099838 1 G A scaffold18363 Both SNP 0031.scaffold00123 1099915 1 A G scaffold18363 Both SNP 0031.scaffold00123 1099936 1 A T scaffold18363 Both SNP 0031.scaffold00123 1099996 1 A C scaffold18363 Both SNP 0031.scaffold00123 1100025 1 C T scaffold18363 Both SNP 0031.scaffold00123 1100060 1 G T scaffold18363 Both SNP 0031.scaffold00123 1100070 1 C A scaffold18363 Both SNP 0031.scaffold00123 1100233 1 A G scaffold18363 Both SNP 0031.scaffold00123 1100337 1 A T scaffold18363 Both SNP 0031.scaffold00123 1100344 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1100425 2 CC TT scaffold18363 ScafM SNP 0031.scaffold00123 1100472 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1100482 1 C T scaffold18363 Both SNP 0031.scaffold00123 1100506 1 G A scaffold18363 Both SNP 0031.scaffold00123 1100537 1 G A scaffold18363 Both SNP 0031.scaffold00123 1100580 1 A G scaffold18363 Both SNP 0031.scaffold00123 1100660 1 C T scaffold18363 Both SNP 0031.scaffold00123 1100719 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1100724 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1100727 1 G T scaffold18363 Both SNP 0031.scaffold00123 1100779 1 G A scaffold18363 Both SNP 0031.scaffold00123 1100812 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1100890 1 C G scaffold18363 ScafM SNP 0031.scaffold00123 1100926 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1100933 1 C G scaffold18363 ScafM INDEL 0031.scaffold00123 1100956 6 ...... ATGTGA scaffold18363 Both SNP 0031.scaffold00123 1101018 1 A G scaffold18363 Both SNP 0031.scaffold00123 1101046 1 G C scaffold18363 ScafM SNP 0031.scaffold00123 1101069 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1101099 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1101339 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1101396 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1101510 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1101518 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1101550 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1101801 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1101805 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1101815 1 C . scaffold18363 ScafM SNP 0031.scaffold00123 1101818 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1101830 3 CCT GAC scaffold18363 ScafM SNP 0031.scaffold00123 1101865 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1101892 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102774 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1102798 1 T A scaffold18363 ScafM SNP 0031.scaffold00123 1102820 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1102837 1 C A scaffold18363 ScafM SNP 0031.scaffold00123 1102845 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1102858 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102862 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102886 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102903 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1102907 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1102916 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102966 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1102971 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1102984 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1102990 2 TT AC scaffold18363 ScafM SNP 0031.scaffold00123 1102997 2 AC TA scaffold18363 ScafM SNP 0031.scaffold00123 1103000 1 A T scaffold18363 ScafM SNP 0031.scaffold00123 1103056 2 AG GA scaffold18363 ScafM SNP 0031.scaffold00123 1103067 2 TT CC scaffold18363 ScafM SNP 0031.scaffold00123 1103090 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1103098 1 G T scaffold18363 ScafM SNP 0031.scaffold00123 1103123 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1103156 1 A C scaffold18363 ScafM SNP 0031.scaffold00123 1103181 1 A C scaffold18363 ScafM INDEL 0031.scaffold00123 1103186 1 . C scaffold18363 ScafM SNP 0031.scaffold00123 1103202 1 T C scaffold18363 ScafM SNP 0031.scaffold00123 1103228 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1103547 1 A C scaffold18363 ReadM SNP 0031.scaffold00123 1103845 1 T C - ReadM SNP 0031.scaffold00123 1103891 1 T C - ReadM SNP 0031.scaffold00123 1103906 1 T A - ReadM SNP 0031.scaffold00123 1104060 1 T A - ReadM SNP 0031.scaffold00123 1104123 1 G A - ReadM SNP 0031.scaffold00123 1104373 1 C T - ReadM SNP 0031.scaffold00123 1104654 1 T C - ReadM SNP 0031.scaffold00123 1104829 1 T C - ReadM INDEL 0031.scaffold00123 1104896 1 C . - ReadM SNP 0031.scaffold00123 1105000 1 G T - ReadM SNP 0031.scaffold00123 1105074 1 T C - ReadM SNP 0031.scaffold00123 1105174 1 A G - ReadM SNP 0031.scaffold00123 1105260 1 C T - ReadM SNP 0031.scaffold00123 1105355 1 G A - ReadM SNP 0031.scaffold00123 1105425 1 C T - ReadM SNP 0031.scaffold00123 1105756 1 T C - ReadM SNP 0031.scaffold00123 1105794 1 C A - ReadM SNP 0031.scaffold00123 1105898 1 A G - ReadM SNP 0031.scaffold00123 1105904 1 A G - ReadM SNP 0031.scaffold00123 1105967 1 C T - ReadM SNP 0031.scaffold00123 1106045 1 C T - ReadM SNP 0031.scaffold00123 1106139 1 T C - ReadM SNP 0031.scaffold00123 1106379 1 G C - ReadM SNP 0031.scaffold00123 1106602 1 T G - ReadM SNP 0031.scaffold00123 1106738 1 A G - ReadM SNP 0031.scaffold00123 1106746 1 C G - ReadM SNP 0031.scaffold00123 1106753 1 T C - ReadM SNP 0031.scaffold00123 1106789 1 C T - ReadM SNP 0031.scaffold00123 1106834 1 A G - ReadM SNP 0031.scaffold00123 1106878 1 G A - ReadM INDEL 0031.scaffold00123 1107028 1 T . - ReadM SNP 0031.scaffold00123 1107384 1 G A - ReadM SNP 0031.scaffold00123 1107438 1 C T - ReadM SNP 0031.scaffold00123 1107543 1 T C - ReadM SNP 0031.scaffold00123 1107608 1 A G - ReadM SNP 0031.scaffold00123 1107642 1 G C - ReadM SNP 0031.scaffold00123 1107690 1 T C - Both SNP 0031.scaffold00123 1107737 1 G A scaffold18363 Both SNP 0031.scaffold00123 1107772 1 T G scaffold18363 ScafM SNP 0031.scaffold00123 1107800 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1107810 1 C G scaffold18363 ScafM INDEL 0031.scaffold00123 1107838 1 C . scaffold18363 ScafM SNP 0031.scaffold00123 1107881 1 A G scaffold18363 Both INDEL 0031.scaffold00123 1107887 1 . C scaffold18363 Both SNP 0031.scaffold00123 1107988 1 C T scaffold18363 Both SNP 0031.scaffold00123 1108194 1 T G scaffold18363 Both SNP 0031.scaffold00123 1108243 1 A G scaffold18363 Both SNP 0031.scaffold00123 1108286 1 G A scaffold18363 Both SNP 0031.scaffold00123 1108312 1 C G scaffold18363 Both SNP 0031.scaffold00123 1108364 1 T A scaffold18363 Both SNP 0031.scaffold00123 1108374 1 G A scaffold18363 Both SNP 0031.scaffold00123 1108387 1 G T scaffold18363 Both SNP 0031.scaffold00123 1108487 1 C T scaffold18363 ScafM INDEL 0031.scaffold00123 1108520 2 .. TT scaffold18363 ScafM SNP 0031.scaffold00123 1108525 1 C T scaffold18363 Both SNP 0031.scaffold00123 1108590 1 A T scaffold18363 Both SNP 0031.scaffold00123 1108893 1 T G scaffold18363 Both SNP 0031.scaffold00123 1108928 1 C T scaffold18363 Both SNP 0031.scaffold00123 1109033 1 G C scaffold18363 Both SNP 0031.scaffold00123 1109119 1 C T scaffold18363 Both SNP 0031.scaffold00123 1109136 1 T G scaffold18363 Both SNP 0031.scaffold00123 1109164 1 A G scaffold18363 Both SNP 0031.scaffold00123 1109357 1 T C scaffold18363 Both SNP 0031.scaffold00123 1109578 1 T A scaffold18363 Both SNP 0031.scaffold00123 1109584 1 A G scaffold18363 ReadM SNP 0031.scaffold00123 1109894 1 C A - Both SNP 0031.scaffold00123 1110093 1 C T scaffold18363 Both SNP 0031.scaffold00123 1110168 1 A G scaffold18363 Both INDEL 0031.scaffold00123 1110251 3 AAT ... scaffold18363 ReadM SNP 0031.scaffold00123 1110552 1 T C - ReadM SNP 0031.scaffold00123 1110600 1 T A - ScafM INDEL 0031.scaffold00123 1110902 2 .. AC scaffold18363 Both SNP 0031.scaffold00123 1111025 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1111071 2 TC AT scaffold18363 ReadM SNP 0031.scaffold00123 1111196 1 A G - ReadM SNP 0031.scaffold00123 1111198 1 T C - ReadM SNP 0031.scaffold00123 1111403 1 A G - ReadM SNP 0031.scaffold00123 1111854 1 G C - ReadM SNP 0031.scaffold00123 1111889 1 G A - ReadM SNP 0031.scaffold00123 1112009 1 G A - ReadM SNP 0031.scaffold00123 1112034 1 C T - ReadM SNP 0031.scaffold00123 1112087 1 C T - ReadM SNP 0031.scaffold00123 1112839 1 T C - ReadM SNP 0031.scaffold00123 1112844 1 G T - ReadM INDEL 0031.scaffold00123 1112928 2 AG .. - ReadM SNP 0031.scaffold00123 1112956 1 G T - ReadM SNP 0031.scaffold00123 1113066 1 C A - ReadM SNP 0031.scaffold00123 1113148 1 C G - ReadM SNP 0031.scaffold00123 1113200 1 C G - ReadM SNP 0031.scaffold00123 1113211 1 C T - ReadM SNP 0031.scaffold00123 1113334 1 G A - ReadM INDEL 0031.scaffold00123 1113364 1 . T - ReadM SNP 0031.scaffold00123 1113978 1 A G - ReadM SNP 0031.scaffold00123 1114003 1 C T - ScafM INDEL 0031.scaffold00123 1114187 4 TATA .... scaffold18363 ScafM SNP 0031.scaffold00123 1114275 1 A C scaffold18363 ScafM INDEL 0031.scaffold00123 1114363 4 TTAT .... scaffold18363 ScafM SNP 0031.scaffold00123 1114987 1 T A scaffold18363 Both SNP 0031.scaffold00123 1115190 1 A T scaffold18363 Both SNP 0031.scaffold00123 1115225 1 C T scaffold18363 Both SNP 0031.scaffold00123 1115265 1 C T scaffold18363 Both SNP 0031.scaffold00123 1115395 1 T C scaffold18363 Both SNP 0031.scaffold00123 1115430 1 G A scaffold18363 Both SNP 0031.scaffold00123 1115454 1 C T scaffold18363 Both SNP 0031.scaffold00123 1115481 1 A T scaffold18363 ReadM SNP 0031.scaffold00123 1115668 1 T G - ReadM INDEL 0031.scaffold00123 1115677 1 T . - ScafM SNP 0031.scaffold00123 1116037 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1116045 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1116050 1 A G scaffold18363 Both SNP 0031.scaffold00123 1116103 1 A G scaffold18363 ReadM SNP 0031.scaffold00123 1116257 1 C G - Both SNP 0031.scaffold00123 1116461 1 C T scaffold18363 Both INDEL 0031.scaffold00123 1116465 1 T . scaffold18363 ReadM SNP 0031.scaffold00123 1116516 1 A G - ReadM SNP 0031.scaffold00123 1116582 1 A T - ReadM SNP 0031.scaffold00123 1116680 1 A T - ReadM SNP 0031.scaffold00123 1116685 1 C T - ReadM SNP 0031.scaffold00123 1116708 1 C T - ReadM SNP 0031.scaffold00123 1116918 1 G A - ReadM SNP 0031.scaffold00123 1116926 1 C T - ScafM SNP 0031.scaffold00123 1116966 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1116978 1 T C scaffold18363 Both SNP 0031.scaffold00123 1117002 1 G A scaffold18363 ScafM SNP 0031.scaffold00123 1117031 1 A G scaffold18363 ScafM INDEL 0031.scaffold00123 1117079 11 ........... ATAATCGGGTC scaffold18363 ScafM SNP 0031.scaffold00123 1117092 1 A G scaffold18363 ScafM SNP 0031.scaffold00123 1117095 1 T C scaffold18363 Both SNP 0031.scaffold00123 1117125 1 C A scaffold18363 Both SNP 0031.scaffold00123 1117137 1 T G scaffold18363 ReadM SNP 0031.scaffold00123 1117376 1 A G - ReadM SNP 0031.scaffold00123 1117396 1 G T - ReadM SNP 0031.scaffold00123 1117412 1 A G - ReadM SNP 0031.scaffold00123 1117476 1 G A - ScafM SNP 0031.scaffold00123 1117522 1 C T scaffold18363 ScafM SNP 0031.scaffold00123 1117545 1 G A scaffold18363 ScafM INDEL 0031.scaffold00123 1117553 14 .............. CGGGTCAACTTGTA scaffold18363 ReadM SNP 0031.scaffold00123 1117643 1 C T - ReadM SNP 0032.scaffold00124 32354 1 A G - ScafM SNP 0032.scaffold00124 64464 1 A G scaffold4504 ScafM SNP 0032.scaffold00124 65498 1 A C scaffold4504 ScafM INDEL 0032.scaffold00124 88970 2 .. AA scaffold4504 ScafM INDEL 0032.scaffold00124 177302 1 . T scaffold895 ScafM SNP 0032.scaffold00124 177304 1 G T scaffold895 ScafM SNP 0032.scaffold00124 177307 1 G T scaffold895 ScafM SNP 0032.scaffold00124 195381 1 A G scaffold895 ReadM INDEL 0032.scaffold00124 206688 1 . T - ScafM INDEL 0032.scaffold00124 236411 1 . A scaffold10018 ScafM INDEL 0032.scaffold00124 236465 1 . A scaffold10018 ScafM SNP 0032.scaffold00124 239691 1 A T scaffold10018 ScafM SNP 0032.scaffold00124 241833 1 A G scaffold10018 ScafM INDEL 0032.scaffold00124 243914 1 T . scaffold10018 ScafM SNP 0032.scaffold00124 243929 1 G A scaffold10018 ScafM SNP 0032.scaffold00124 243936 1 T C scaffold10018 ScafM SNP 0032.scaffold00124 243943 1 C A scaffold10018 ScafM SNP 0032.scaffold00124 243947 1 A G scaffold10018 ScafM SNP 0032.scaffold00124 257891 1 T A scaffold3011 ScafM SNP 0032.scaffold00124 257911 1 T C scaffold3011 ScafM SNP 0032.scaffold00124 257980 1 A G scaffold3011 ScafM INDEL 0032.scaffold00124 257991 1 . A scaffold3011 ScafM SNP 0032.scaffold00124 258003 1 G A scaffold3011 ScafM SNP 0032.scaffold00124 258005 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 258028 1 A T scaffold3011 ScafM SNP 0032.scaffold00124 258061 1 A G scaffold3011 ScafM INDEL 0032.scaffold00124 258077 10 AAGAAAACAC .......... scaffold3011 ScafM INDEL 0032.scaffold00124 258090 1 C . scaffold3011 ScafM SNP 0032.scaffold00124 258127 1 C T scaffold3011 ScafM SNP 0032.scaffold00124 258160 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 258208 1 T A scaffold3011 ScafM SNP 0032.scaffold00124 258337 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 258377 1 G T scaffold3011 ScafM SNP 0032.scaffold00124 258432 1 C A scaffold3011 ScafM SNP 0032.scaffold00124 258495 1 A T scaffold3011 ScafM SNP 0032.scaffold00124 258507 1 T A scaffold3011 ScafM SNP 0032.scaffold00124 258509 1 C T scaffold3011 ScafM SNP 0032.scaffold00124 258534 1 G T scaffold3011 ScafM SNP 0032.scaffold00124 258547 1 C T scaffold3011 ScafM SNP 0032.scaffold00124 258607 2 CA TC scaffold3011 ScafM SNP 0032.scaffold00124 258615 1 G A scaffold3011 ScafM SNP 0032.scaffold00124 258710 1 G A scaffold3011 ScafM SNP 0032.scaffold00124 258825 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 258902 1 T C scaffold3011 ScafM SNP 0032.scaffold00124 258908 2 CT TC scaffold3011 ScafM SNP 0032.scaffold00124 258944 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 258970 2 AG GC scaffold3011 ScafM SNP 0032.scaffold00124 258975 1 A T scaffold3011 ScafM SNP 0032.scaffold00124 258977 1 A G scaffold3011 ScafM SNP 0032.scaffold00124 261997 1 C T scaffold10018 ScafM INDEL 0032.scaffold00124 264228 1 T . scaffold10018 ReadM SNP 0032.scaffold00124 287964 1 C G - ScafM SNP 0032.scaffold00124 308196 1 T A scaffold3699 ScafM SNP 0032.scaffold00124 342432 2 AC GG scaffold7932 ScafM SNP 0032.scaffold00124 353073 1 A G scaffold7932 ScafM SNP 0032.scaffold00124 353243 1 G A scaffold7932 ScafM SNP 0032.scaffold00124 353504 1 T C scaffold7932 ScafM SNP 0032.scaffold00124 353698 1 C T scaffold7932 Both SNP 0032.scaffold00124 380586 1 G C scaffold474 ReadM SNP 0032.scaffold00124 401610 1 A G - ReadM SNP 0032.scaffold00124 414821 1 G C - ScafM INDEL 0032.scaffold00124 421446 11 ........... GGGGGGGGGGG scaffold474 ScafM INDEL 0032.scaffold00124 422491 1 . T scaffold474 Both SNP 0032.scaffold00124 423801 1 G C scaffold474 ScafM INDEL 0032.scaffold00124 432701 4 .... TTTT scaffold474 ScafM SNP 0032.scaffold00124 433190 1 T A scaffold474 Both INDEL 0032.scaffold00124 455533 1 . T scaffold5423 ReadM SNP 0032.scaffold00124 458560 1 G A - ScafM INDEL 0032.scaffold00124 481569 1 A . scaffold5423 ScafM SNP 0033.scaffold00127 38 2 CA AC scaffold1183 ScafM SNP 0033.scaffold00127 81 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 84 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 90 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 111 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 130 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 138 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 154 2 .. AA scaffold1183 ScafM SNP 0033.scaffold00127 176 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 593 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 636 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 662 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 667 1 . T scaffold1183 ScafM INDEL 0033.scaffold00127 698 1 T . scaffold1183 ScafM INDEL 0033.scaffold00127 723 6 TATGTT ...... scaffold1183 ScafM SNP 0033.scaffold00127 759 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 763 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 766 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 1018 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 1034 2 CC AT scaffold1183 ScafM SNP 0033.scaffold00127 1039 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 1056 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 1061 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 1075 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 1077 2 CT TC scaffold1183 ScafM SNP 0033.scaffold00127 1091 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 1093 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 1105 1 G C scaffold1183 ScafM INDEL 0033.scaffold00127 1120 3 AAA ..T scaffold1183 ScafM SNP 0033.scaffold00127 1127 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 1428 1 C T scaffold1183 Both SNP 0033.scaffold00127 1630 1 C T scaffold1183 Both SNP 0033.scaffold00127 1738 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 1783 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 1811 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 1819 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 1835 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 1858 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 1866 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 1879 1 T C scaffold1183 Both SNP 0033.scaffold00127 1944 1 T A scaffold1183 Both SNP 0033.scaffold00127 1946 1 T A scaffold1183 Both SNP 0033.scaffold00127 1988 1 G A scaffold1183 Both SNP 0033.scaffold00127 2038 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 2052 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 2067 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 2070 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 2083 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 2085 1 C T scaffold1183 Both SNP 0033.scaffold00127 2142 1 C G scaffold1183 Both SNP 0033.scaffold00127 2154 1 G T scaffold1183 Both SNP 0033.scaffold00127 2195 1 C G scaffold1183 Both SNP 0033.scaffold00127 2338 1 A G scaffold1183 Both SNP 0033.scaffold00127 2376 1 T C scaffold1183 Both SNP 0033.scaffold00127 2511 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 2534 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 2536 2 AC TG scaffold1183 Both SNP 0033.scaffold00127 2907 1 T C scaffold1183 Both INDEL 0033.scaffold00127 2982 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 2987 1 G A scaffold1183 Both SNP 0033.scaffold00127 3184 1 T C scaffold1183 Both SNP 0033.scaffold00127 3228 1 C T scaffold1183 Both SNP 0033.scaffold00127 3284 1 C G scaffold1183 Both SNP 0033.scaffold00127 3332 1 A T scaffold1183 Both SNP 0033.scaffold00127 3341 1 A T scaffold1183 Both SNP 0033.scaffold00127 3347 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 3429 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 3442 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 3445 2 AA TT scaffold1183 ScafM SNP 0033.scaffold00127 3450 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 3459 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 3467 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 3474 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 3492 1 T C scaffold1183 Both SNP 0033.scaffold00127 3654 1 C T scaffold1183 Both SNP 0033.scaffold00127 3704 1 C T scaffold1183 Both SNP 0033.scaffold00127 3731 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 3811 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 3832 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 3886 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 3943 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 4009 1 A . scaffold1183 ScafM INDEL 0033.scaffold00127 4012 1 A . scaffold1183 ScafM INDEL 0033.scaffold00127 4023 13 ATTATATTTATGA ............. scaffold1183 ScafM SNP 0033.scaffold00127 4046 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4083 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 4142 8 TTGGGACT ........ scaffold1183 ScafM SNP 0033.scaffold00127 4158 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 4165 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 4200 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 4208 2 CC TG scaffold1183 ScafM SNP 0033.scaffold00127 4212 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 4230 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4282 1 C A scaffold1183 Both SNP 0033.scaffold00127 4291 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 4403 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 4445 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 4447 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 4501 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 4517 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 4527 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 4542 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 4596 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 4678 2 CA TT scaffold1183 ScafM SNP 0033.scaffold00127 4708 1 C G scaffold1183 Both SNP 0033.scaffold00127 4717 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 4730 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4755 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 4769 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4798 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 4802 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 4827 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4855 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 4861 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 4864 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 4873 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 4975 1 C T scaffold1183 ReadM SNP 0033.scaffold00127 5118 1 G A - ScafM SNP 0033.scaffold00127 5214 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 5389 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 5392 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 5497 1 G A scaffold1183 Both SNP 0033.scaffold00127 5502 1 C T scaffold1183 Both SNP 0033.scaffold00127 5616 1 G T scaffold1183 ReadM INDEL 0033.scaffold00127 5654 1 . C - ScafM INDEL 0033.scaffold00127 5654 2 .A CT scaffold1183 Both SNP 0033.scaffold00127 5715 1 C T scaffold1183 Both SNP 0033.scaffold00127 5738 1 T C scaffold1183 Both SNP 0033.scaffold00127 5764 1 T C scaffold1183 Both SNP 0033.scaffold00127 5813 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 5865 2 .. AG scaffold1183 ScafM INDEL 0033.scaffold00127 5867 1 . G scaffold1183 Both INDEL 0033.scaffold00127 5980 1 A . scaffold1183 Both SNP 0033.scaffold00127 6010 1 C T scaffold1183 Both SNP 0033.scaffold00127 6131 1 T C scaffold1183 Both SNP 0033.scaffold00127 6172 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 6200 1 G A scaffold1183 ReadM SNP 0033.scaffold00127 6927 1 G A - ReadM SNP 0033.scaffold00127 7003 1 G T - ScafM INDEL 0033.scaffold00127 7390 1 . A scaffold1183 ScafM INDEL 0033.scaffold00127 7474 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 7478 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 7481 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 7483 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 7498 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 7511 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 7889 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 7910 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 8018 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 8032 1 C T scaffold1183 Both SNP 0033.scaffold00127 8151 1 G C scaffold1183 Both SNP 0033.scaffold00127 8182 1 A T scaffold1183 Both SNP 0033.scaffold00127 8461 1 T C scaffold1183 Both SNP 0033.scaffold00127 8519 1 T A scaffold1183 Both SNP 0033.scaffold00127 8750 1 C T scaffold1183 Both INDEL 0033.scaffold00127 8812 1 T . scaffold1183 Both SNP 0033.scaffold00127 8834 1 G A scaffold1183 Both SNP 0033.scaffold00127 8843 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 8966 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 8997 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 9002 7 ....... CCAAGGG scaffold1183 ScafM INDEL 0033.scaffold00127 9020 1 T . scaffold1183 Both SNP 0033.scaffold00127 9043 1 T G scaffold1183 Both SNP 0033.scaffold00127 9126 1 A G scaffold1183 Both SNP 0033.scaffold00127 9128 1 C T scaffold1183 Both SNP 0033.scaffold00127 9155 1 G A scaffold1183 Both SNP 0033.scaffold00127 9182 1 A T scaffold1183 Both SNP 0033.scaffold00127 9337 1 A C scaffold1183 Both SNP 0033.scaffold00127 9476 1 G A scaffold1183 Both SNP 0033.scaffold00127 9488 1 G A scaffold1183 Both INDEL 0033.scaffold00127 9565 1 . C scaffold1183 ScafM INDEL 0033.scaffold00127 9620 8 AGTGTGCT ........ scaffold1183 Both SNP 0033.scaffold00127 9661 1 G A scaffold1183 Both SNP 0033.scaffold00127 9693 1 A G scaffold1183 Both SNP 0033.scaffold00127 9738 1 C A scaffold1183 Both SNP 0033.scaffold00127 9754 1 T G scaffold1183 Both SNP 0033.scaffold00127 9944 1 C T scaffold1183 Both SNP 0033.scaffold00127 9997 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 10099 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 10109 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 10117 1 G C scaffold1183 ScafM INDEL 0033.scaffold00127 10126 1 A . scaffold1183 Both SNP 0033.scaffold00127 10170 1 C T scaffold1183 Both SNP 0033.scaffold00127 10187 1 A T scaffold1183 Both SNP 0033.scaffold00127 10212 1 A G scaffold1183 Both SNP 0033.scaffold00127 10372 1 C T scaffold1183 Both SNP 0033.scaffold00127 10405 1 A G scaffold1183 Both SNP 0033.scaffold00127 10426 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 10620 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 10627 14 .............. TCTGAAGTCCTCGA scaffold1183 ScafM SNP 0033.scaffold00127 10674 1 A T scaffold1183 Both SNP 0033.scaffold00127 10826 1 C T scaffold1183 Both SNP 0033.scaffold00127 10879 1 T C scaffold1183 Both INDEL 0033.scaffold00127 10909 1 . T scaffold1183 Both SNP 0033.scaffold00127 11233 1 C T scaffold1183 Both SNP 0033.scaffold00127 11386 1 T A scaffold1183 Both SNP 0033.scaffold00127 11526 1 G A scaffold1183 ReadM INDEL 0033.scaffold00127 11529 1 C . - ScafM INDEL 0033.scaffold00127 11529 2 CC .T scaffold1183 Both SNP 0033.scaffold00127 11642 1 A G scaffold1183 Both SNP 0033.scaffold00127 11648 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 11691 5 ATTTT ..... scaffold1183 ScafM INDEL 0033.scaffold00127 11745 9 ......... TTTTATTAT scaffold1183 ScafM INDEL 0033.scaffold00127 11764 1 . T scaffold1183 ScafM INDEL 0033.scaffold00127 11806 7 ....... GGGGGTT scaffold1183 ScafM INDEL 0033.scaffold00127 11807 14 .............. TGGGGGGGGGGGGG scaffold1183 ScafM SNP 0033.scaffold00127 11836 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 11878 8 GCTCACTG ........ scaffold1183 Both SNP 0033.scaffold00127 11931 1 C T scaffold1183 Both INDEL 0033.scaffold00127 11947 1 . T scaffold1183 Both INDEL 0033.scaffold00127 11982 2 .. AA scaffold1183 Both SNP 0033.scaffold00127 12070 1 T A scaffold1183 Both SNP 0033.scaffold00127 12076 1 C T scaffold1183 Both SNP 0033.scaffold00127 12220 1 G T scaffold1183 Both INDEL 0033.scaffold00127 12229 1 A . scaffold1183 Both SNP 0033.scaffold00127 12272 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 12321 1 T G scaffold1183 Both SNP 0033.scaffold00127 12328 1 T G scaffold1183 Both SNP 0033.scaffold00127 12334 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 12438 2 .. TT scaffold1183 ScafM SNP 0033.scaffold00127 12439 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 12447 1 C T scaffold1183 Both SNP 0033.scaffold00127 12465 1 C T scaffold1183 Both SNP 0033.scaffold00127 12519 1 C A scaffold1183 ReadM SNP 0033.scaffold00127 12653 1 G C - Both SNP 0033.scaffold00127 12720 1 G A scaffold1183 Both INDEL 0033.scaffold00127 12829 2 .. TC scaffold1183 ReadM INDEL 0033.scaffold00127 12830 2 .. CG - Both SNP 0033.scaffold00127 12854 1 G T scaffold1183 Both SNP 0033.scaffold00127 12994 1 T C scaffold1183 Both INDEL 0033.scaffold00127 13035 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 13037 1 G T scaffold1183 Both SNP 0033.scaffold00127 13106 1 A C scaffold1183 Both SNP 0033.scaffold00127 13713 1 G T scaffold1183 ReadM SNP 0033.scaffold00127 13837 1 A G - Both SNP 0033.scaffold00127 14382 1 G A scaffold1183 Both INDEL 0033.scaffold00127 14411 1 . A scaffold1183 Both SNP 0033.scaffold00127 14696 1 A G scaffold1183 Both INDEL 0033.scaffold00127 14737 2 .. TT scaffold1183 Both SNP 0033.scaffold00127 14849 1 A C scaffold1183 Both SNP 0033.scaffold00127 15363 1 A T scaffold1183 Both SNP 0033.scaffold00127 15497 1 C T scaffold1183 Both SNP 0033.scaffold00127 15548 1 T G scaffold1183 Both SNP 0033.scaffold00127 15562 1 T C scaffold1183 ReadM INDEL 0033.scaffold00127 15722 1 T . - ReadM SNP 0033.scaffold00127 15747 1 G C - ReadM SNP 0033.scaffold00127 15761 1 G A - ReadM SNP 0033.scaffold00127 15824 1 A G - ReadM SNP 0033.scaffold00127 15842 1 T G - Both SNP 0033.scaffold00127 16100 1 G T scaffold1183 Both SNP 0033.scaffold00127 16143 1 A C scaffold1183 Both SNP 0033.scaffold00127 16239 1 T C scaffold1183 Both SNP 0033.scaffold00127 16251 1 G A scaffold1183 Both INDEL 0033.scaffold00127 16418 3 ... TTG scaffold1183 Both SNP 0033.scaffold00127 16607 1 C G scaffold1183 Both SNP 0033.scaffold00127 16633 1 T A scaffold1183 Both SNP 0033.scaffold00127 16694 1 G C scaffold1183 Both SNP 0033.scaffold00127 16814 1 A G scaffold1183 Both INDEL 0033.scaffold00127 16862 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 16865 1 C T scaffold1183 Both SNP 0033.scaffold00127 16983 1 C G scaffold1183 ReadM SNP 0033.scaffold00127 17048 1 G A - ReadM SNP 0033.scaffold00127 17058 1 G T - ReadM SNP 0033.scaffold00127 17170 1 A T - ReadM SNP 0033.scaffold00127 17199 1 G C - Both SNP 0033.scaffold00127 17462 1 A G scaffold1183 Both SNP 0033.scaffold00127 17569 1 A G scaffold1183 Both SNP 0033.scaffold00127 17574 1 A C scaffold1183 Both SNP 0033.scaffold00127 17621 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 17705 2 TA GG scaffold1183 Both SNP 0033.scaffold00127 17719 1 C T scaffold1183 Both SNP 0033.scaffold00127 17745 1 A T scaffold1183 Both SNP 0033.scaffold00127 17776 1 C T scaffold1183 Both SNP 0033.scaffold00127 18196 1 C T scaffold1183 Both INDEL 0033.scaffold00127 18213 1 A . scaffold1183 Both SNP 0033.scaffold00127 18276 1 C G scaffold1183 Both SNP 0033.scaffold00127 18342 1 G T scaffold1183 Both SNP 0033.scaffold00127 18371 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 18415 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 18430 3 TAA ATT scaffold1183 ScafM SNP 0033.scaffold00127 18436 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 18439 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 18471 2 TT AA scaffold1183 Both INDEL 0033.scaffold00127 18505 2 .. AT scaffold1183 Both SNP 0033.scaffold00127 18537 1 A T scaffold1183 Both SNP 0033.scaffold00127 18611 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 18634 3 ... CGT scaffold1183 Both SNP 0033.scaffold00127 18672 1 C T scaffold1183 Both SNP 0033.scaffold00127 18797 1 A G scaffold1183 Both SNP 0033.scaffold00127 18895 1 C T scaffold1183 Both SNP 0033.scaffold00127 18907 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 18949 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 18957 1 G A scaffold1183 Both SNP 0033.scaffold00127 19160 1 C T scaffold1183 Both SNP 0033.scaffold00127 19233 1 T G scaffold1183 Both SNP 0033.scaffold00127 19281 1 C T scaffold1183 Both SNP 0033.scaffold00127 19312 1 T C scaffold1183 Both SNP 0033.scaffold00127 19339 1 T G scaffold1183 Both SNP 0033.scaffold00127 19372 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 19468 1 C A scaffold1183 ScafM INDEL 0033.scaffold00127 19484 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 19501 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 19510 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 19523 7 ACACCAG ....... scaffold1183 ScafM INDEL 0033.scaffold00127 19590 58 CCCCTCTATTATTTTTTTTCTCGGAAGAGAGCACTTATTGGGCATCTTCTAAAATGAC .......................................................... scaffold1183 ScafM SNP 0033.scaffold00127 19664 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 19675 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 19718 2 .. TT scaffold1183 Both SNP 0033.scaffold00127 19733 1 A G scaffold1183 Both SNP 0033.scaffold00127 19749 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 19855 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 19861 5 ATTCA ..... scaffold1183 ScafM SNP 0033.scaffold00127 19874 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 19880 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 19902 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 19919 2 TG CA scaffold1183 ScafM SNP 0033.scaffold00127 19973 1 A G scaffold1183 Both SNP 0033.scaffold00127 19993 1 T C scaffold1183 Both SNP 0033.scaffold00127 20042 1 C T scaffold1183 Both SNP 0033.scaffold00127 20076 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 20330 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 20369 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 21186 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 21281 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 21289 1 A T scaffold1183 Both SNP 0033.scaffold00127 21354 1 T C scaffold1183 Both SNP 0033.scaffold00127 21373 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 21398 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 21474 2 .. CC scaffold1183 ScafM INDEL 0033.scaffold00127 21476 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 21479 1 G C scaffold1183 ScafM INDEL 0033.scaffold00127 21480 4 .... TCAA scaffold1183 ScafM INDEL 0033.scaffold00127 21481 2 .. CC scaffold1183 ScafM SNP 0033.scaffold00127 21485 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 21486 2 .. TA scaffold1183 ScafM INDEL 0033.scaffold00127 21487 1 . G scaffold1183 ScafM INDEL 0033.scaffold00127 21488 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 21490 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 21495 3 ... AAA scaffold1183 ScafM SNP 0033.scaffold00127 21525 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 21528 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 21560 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 21637 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 24118 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 24121 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 24123 2 .G TA scaffold1183 ScafM SNP 0033.scaffold00127 24137 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 24148 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 24218 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 24230 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 24247 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 24248 1 . C scaffold1183 ScafM INDEL 0033.scaffold00127 24347 1 . T scaffold1183 ScafM INDEL 0033.scaffold00127 24362 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 24365 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 24446 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 24448 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 24453 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 24462 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 24886 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 24890 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 24903 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 25176 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 25184 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 25191 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 25242 9 ......... CCGGATTCA scaffold1183 ScafM INDEL 0033.scaffold00127 25244 4 .... CGCC scaffold1183 ScafM SNP 0033.scaffold00127 25293 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 25306 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 25318 1 T C scaffold1183 Both SNP 0033.scaffold00127 25378 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 25411 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 25426 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 25441 2 TC AT scaffold1183 ScafM SNP 0033.scaffold00127 25463 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 25485 4 TCAC .... scaffold1183 ScafM INDEL 0033.scaffold00127 25492 4 TTCC .... scaffold1183 Both SNP 0033.scaffold00127 25581 1 G A scaffold1183 Both SNP 0033.scaffold00127 25617 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 25821 1 G A scaffold1183 ReadM SNP 0033.scaffold00127 26030 1 T C - Both SNP 0033.scaffold00127 26282 1 A T scaffold1183 Both SNP 0033.scaffold00127 26289 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 26343 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 26347 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 26357 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 26366 1 A C scaffold1183 Both SNP 0033.scaffold00127 26415 1 G A scaffold1183 Both INDEL 0033.scaffold00127 26487 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 26543 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 26560 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 26587 3 CGA TAG scaffold1183 ScafM SNP 0033.scaffold00127 26604 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 26620 1 T C scaffold1183 Both SNP 0033.scaffold00127 26789 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 26894 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 26896 1 T A scaffold1183 Both SNP 0033.scaffold00127 27098 1 A T scaffold1183 Both SNP 0033.scaffold00127 27204 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 27268 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 27295 1 T A scaffold1183 Both SNP 0033.scaffold00127 27428 1 T G scaffold1183 ReadM SNP 0033.scaffold00127 27939 1 A T - ReadM SNP 0033.scaffold00127 28161 1 G A - ReadM SNP 0033.scaffold00127 28369 1 G A - Both SNP 0033.scaffold00127 28466 1 G T scaffold1183 Both SNP 0033.scaffold00127 28520 1 A G scaffold1183 Both SNP 0033.scaffold00127 28563 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 28569 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 28579 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 28614 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 28637 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 28647 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 28705 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 28709 2 AT TG scaffold1183 ScafM SNP 0033.scaffold00127 28713 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 28743 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 28754 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 28764 1 A C scaffold1183 Both SNP 0033.scaffold00127 28781 1 T C scaffold1183 Both SNP 0033.scaffold00127 28800 1 A G scaffold1183 Both SNP 0033.scaffold00127 28860 1 C T scaffold1183 Both SNP 0033.scaffold00127 28918 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 29023 1 G . scaffold1183 Both SNP 0033.scaffold00127 29249 1 A T scaffold1183 Both SNP 0033.scaffold00127 29281 1 G A scaffold1183 Both SNP 0033.scaffold00127 29365 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 29435 9 ......... ATTTTCATG scaffold1183 Both SNP 0033.scaffold00127 29469 1 T C scaffold1183 Both INDEL 0033.scaffold00127 29536 3 CTT ... scaffold1183 Both SNP 0033.scaffold00127 29628 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 29644 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 29646 1 C T scaffold1183 Both SNP 0033.scaffold00127 29698 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 29899 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 29929 1 C T scaffold1183 ReadM SNP 0033.scaffold00127 30317 1 T A - ReadM SNP 0033.scaffold00127 30364 1 A G - ReadM SNP 0033.scaffold00127 30635 1 T C - ReadM INDEL 0033.scaffold00127 30653 1 . A - Both SNP 0033.scaffold00127 30690 1 A T scaffold1183 Both SNP 0033.scaffold00127 30715 1 T C scaffold1183 Both SNP 0033.scaffold00127 30781 1 C T scaffold1183 Both SNP 0033.scaffold00127 30862 1 G A scaffold1183 Both SNP 0033.scaffold00127 31049 1 A G scaffold1183 Both SNP 0033.scaffold00127 31052 1 T G scaffold1183 Both SNP 0033.scaffold00127 31147 1 C A scaffold1183 Both SNP 0033.scaffold00127 31151 1 G A scaffold1183 Both SNP 0033.scaffold00127 31230 1 T C scaffold1183 Both SNP 0033.scaffold00127 31308 1 G A scaffold1183 Both SNP 0033.scaffold00127 31326 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 31413 9 CATATGAGA ......... scaffold1183 Both SNP 0033.scaffold00127 31582 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 31617 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 31619 1 T C scaffold1183 Both INDEL 0033.scaffold00127 31701 1 C . scaffold1183 ScafM SNP 0033.scaffold00127 31704 1 A T scaffold1183 Both SNP 0033.scaffold00127 31744 1 T C scaffold1183 ReadM SNP 0033.scaffold00127 31880 1 G A - Both SNP 0033.scaffold00127 31980 1 T C scaffold1183 ReadM SNP 0033.scaffold00127 32025 1 A T - ReadM SNP 0033.scaffold00127 32063 1 G A - ReadM SNP 0033.scaffold00127 32124 1 T C - ReadM SNP 0033.scaffold00127 32134 1 A C - ReadM SNP 0033.scaffold00127 32157 1 T C - ReadM SNP 0033.scaffold00127 32195 1 T C - Both SNP 0033.scaffold00127 32256 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 32342 1 C T scaffold1183 Both SNP 0033.scaffold00127 32431 1 G T scaffold1183 Both SNP 0033.scaffold00127 32442 1 C G scaffold1183 Both SNP 0033.scaffold00127 32473 1 T C scaffold1183 Both INDEL 0033.scaffold00127 32584 1 . T scaffold1183 Both SNP 0033.scaffold00127 32604 1 C A scaffold1183 Both SNP 0033.scaffold00127 32630 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 32747 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 32796 13 ............. TTTTTTTTTTTTT scaffold1183 ScafM SNP 0033.scaffold00127 32810 1 G T scaffold1183 Both INDEL 0033.scaffold00127 32910 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 32992 2 GT TA scaffold1183 Both INDEL 0033.scaffold00127 33119 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 33121 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 33195 4 .... CCGG scaffold1183 ScafM SNP 0033.scaffold00127 33197 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 33200 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 33207 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 33287 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 33316 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 33330 1 A C scaffold1183 Both SNP 0033.scaffold00127 33365 1 C T scaffold1183 Both SNP 0033.scaffold00127 33454 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 33508 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 33510 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 33512 1 C G scaffold1183 Both SNP 0033.scaffold00127 33546 1 G C scaffold1183 Both SNP 0033.scaffold00127 33613 1 A G scaffold1183 Both SNP 0033.scaffold00127 33672 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 33912 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 33915 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 33917 1 T A scaffold1183 Both SNP 0033.scaffold00127 34008 1 G A scaffold1183 Both SNP 0033.scaffold00127 34130 1 C T scaffold1183 Both SNP 0033.scaffold00127 34135 1 G A scaffold1183 Both SNP 0033.scaffold00127 34211 1 G A scaffold1183 Both SNP 0033.scaffold00127 34356 1 G A scaffold1183 Both INDEL 0033.scaffold00127 34396 1 . G scaffold1183 Both SNP 0033.scaffold00127 34418 1 A G scaffold1183 Both SNP 0033.scaffold00127 34424 1 A T scaffold1183 Both SNP 0033.scaffold00127 34451 1 A G scaffold1183 Both SNP 0033.scaffold00127 34561 1 C T scaffold1183 Both SNP 0033.scaffold00127 34829 1 A G scaffold1183 Both SNP 0033.scaffold00127 34882 1 A C scaffold1183 Both SNP 0033.scaffold00127 34906 1 A G scaffold1183 Both SNP 0033.scaffold00127 34996 1 G A scaffold1183 Both SNP 0033.scaffold00127 35290 1 A T scaffold1183 Both SNP 0033.scaffold00127 35355 1 A G scaffold1183 Both SNP 0033.scaffold00127 35373 1 T C scaffold1183 Both SNP 0033.scaffold00127 35394 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 35550 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 35557 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 35565 16 AATTTACTAAGAGTGC ................ scaffold1183 Both SNP 0033.scaffold00127 35624 1 G A scaffold1183 Both SNP 0033.scaffold00127 35692 1 T A scaffold1183 Both SNP 0033.scaffold00127 35732 1 C T scaffold1183 Both SNP 0033.scaffold00127 35754 1 C A scaffold1183 Both SNP 0033.scaffold00127 35759 1 T C scaffold1183 Both SNP 0033.scaffold00127 35838 1 T A scaffold1183 Both SNP 0033.scaffold00127 36019 1 T A scaffold1183 Both SNP 0033.scaffold00127 36058 1 T G scaffold1183 Both SNP 0033.scaffold00127 36192 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 36257 1 A G scaffold1183 Both SNP 0033.scaffold00127 36260 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 36301 1 G A scaffold1183 Both SNP 0033.scaffold00127 36377 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 36466 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 36508 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 36510 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 36525 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 36549 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 36556 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 36599 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 36695 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 36737 12 ............ TTGGGGGTGGGG scaffold1183 ScafM INDEL 0033.scaffold00127 36744 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 36995 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 37144 9 AGGCATTTA ......... scaffold1183 ScafM SNP 0033.scaffold00127 37162 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 37171 1 . G scaffold1183 Both SNP 0033.scaffold00127 37254 1 T G scaffold1183 Both SNP 0033.scaffold00127 37277 1 T A scaffold1183 Both SNP 0033.scaffold00127 37340 1 C T scaffold1183 Both SNP 0033.scaffold00127 37359 1 A T scaffold1183 Both SNP 0033.scaffold00127 37464 1 C T scaffold1183 Both SNP 0033.scaffold00127 37477 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 37527 3 .GG TTA scaffold1183 ScafM SNP 0033.scaffold00127 37531 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 37613 1 T A scaffold1183 Both SNP 0033.scaffold00127 37854 1 T G scaffold1183 Both SNP 0033.scaffold00127 37872 1 A G scaffold1183 Both SNP 0033.scaffold00127 37892 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 37983 2 CC AA scaffold1183 ScafM INDEL 0033.scaffold00127 37997 4 AGAG .... scaffold1183 Both SNP 0033.scaffold00127 38110 1 C T scaffold1183 Both SNP 0033.scaffold00127 38113 1 G A scaffold1183 Both SNP 0033.scaffold00127 38122 1 A G scaffold1183 Both SNP 0033.scaffold00127 38204 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 38214 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 38233 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 38243 1 C T scaffold1183 Both SNP 0033.scaffold00127 38358 1 C A scaffold1183 Both SNP 0033.scaffold00127 38387 1 C T scaffold1183 Both SNP 0033.scaffold00127 38389 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 38569 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 38579 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 38589 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 38706 1 A G scaffold1183 Both SNP 0033.scaffold00127 38786 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 38846 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 38855 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 39000 1 . C scaffold1183 ScafM INDEL 0033.scaffold00127 39032 3 ... GCA scaffold1183 ScafM INDEL 0033.scaffold00127 39088 2 TC .. scaffold1183 ScafM INDEL 0033.scaffold00127 39119 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 39124 1 G C scaffold1183 Both SNP 0033.scaffold00127 39139 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 39275 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 39284 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 39316 2 GG CC scaffold1183 ScafM INDEL 0033.scaffold00127 39327 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 39368 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 39374 1 T C scaffold1183 Both SNP 0033.scaffold00127 39715 1 G A scaffold1183 Both SNP 0033.scaffold00127 39729 1 C T scaffold1183 Both SNP 0033.scaffold00127 39791 1 A T scaffold1183 Both INDEL 0033.scaffold00127 39838 1 . A scaffold1183 Both INDEL 0033.scaffold00127 39878 2 .. TG scaffold1183 Both SNP 0033.scaffold00127 40016 1 A T scaffold1183 Both SNP 0033.scaffold00127 40061 1 G A scaffold1183 Both INDEL 0033.scaffold00127 40103 2 GT .. scaffold1183 Both INDEL 0033.scaffold00127 40209 1 A . scaffold1183 Both SNP 0033.scaffold00127 40418 1 C A scaffold1183 Both SNP 0033.scaffold00127 40524 1 A T scaffold1183 Both SNP 0033.scaffold00127 40664 1 T C scaffold1183 Both SNP 0033.scaffold00127 40666 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 40871 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 40889 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 40973 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 40982 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 41054 11 TAGAAAGAAAA ........... scaffold1183 ScafM INDEL 0033.scaffold00127 41101 1 G . scaffold1183 ScafM SNP 0033.scaffold00127 45100 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 45145 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 45167 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 45169 2 AT GC scaffold1183 ScafM SNP 0033.scaffold00127 45179 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 45191 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 45223 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 45286 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 45288 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 45294 2 TC .. scaffold1183 ScafM SNP 0033.scaffold00127 45321 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 45357 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 46231 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 46257 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 46282 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 46294 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 46312 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 46390 2 CA TT scaffold1183 ScafM SNP 0033.scaffold00127 46424 2 TG GA scaffold1183 Both INDEL 0033.scaffold00127 46477 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 46502 2 AC GT scaffold1183 Both SNP 0033.scaffold00127 46553 1 G A scaffold1183 Both SNP 0033.scaffold00127 46585 1 T C scaffold1183 Both SNP 0033.scaffold00127 46632 1 G A scaffold1183 Both SNP 0033.scaffold00127 46640 1 A T scaffold1183 Both SNP 0033.scaffold00127 46743 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 46760 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 46768 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 46776 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 46793 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 46800 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 46808 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 46833 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 46841 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 46881 1 T C scaffold1183 Both SNP 0033.scaffold00127 46896 1 A T scaffold1183 Both SNP 0033.scaffold00127 46950 1 C A scaffold1183 Both SNP 0033.scaffold00127 46988 1 C T scaffold1183 Both SNP 0033.scaffold00127 47017 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 47031 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 47042 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 47044 2 CA AG scaffold1183 ScafM SNP 0033.scaffold00127 47048 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 47052 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 47064 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 47102 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 47124 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 47162 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 47188 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 47190 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 47224 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 47228 1 C A scaffold1183 Both SNP 0033.scaffold00127 47274 1 T A scaffold1183 Both SNP 0033.scaffold00127 47283 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 47335 1 G . scaffold1183 ScafM SNP 0033.scaffold00127 47340 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 47342 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 47351 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 47356 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 47370 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 47386 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 47388 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 47393 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 47395 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 47408 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 47427 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 47485 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 47525 6 ...... AGTACA scaffold1183 ScafM SNP 0033.scaffold00127 47543 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 47548 1 G A scaffold1183 ReadM SNP 0033.scaffold00127 49288 1 A G - ReadM SNP 0033.scaffold00127 49497 1 T C - ScafM SNP 0033.scaffold00127 49802 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 49815 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 49840 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 49845 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 50009 5 ..... GTCGG scaffold1183 ScafM SNP 0033.scaffold00127 50045 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 50076 8 TTGGGAAC ........ scaffold1183 ScafM SNP 0033.scaffold00127 50089 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 50092 1 C A scaffold1183 ScafM INDEL 0033.scaffold00127 50097 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 50103 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 50138 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 50152 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 50161 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 52492 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52502 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52518 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 52571 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 52591 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 52624 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52637 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 52642 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 52654 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52679 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 52683 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 52692 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 52696 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 52699 3 AAT GGC scaffold1183 ScafM SNP 0033.scaffold00127 52703 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 52709 2 CC .. scaffold1183 ScafM INDEL 0033.scaffold00127 52714 5 GCCCC ..... scaffold1183 ScafM INDEL 0033.scaffold00127 52723 2 TC .. scaffold1183 ScafM SNP 0033.scaffold00127 52731 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 52735 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 52741 2 AA CC scaffold1183 ScafM SNP 0033.scaffold00127 52791 1 T G scaffold1183 ScafM INDEL 0033.scaffold00127 52800 4 .... ACAT scaffold1183 ScafM SNP 0033.scaffold00127 52811 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 52824 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52832 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 52842 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52851 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 52856 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 52861 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 52865 1 G T scaffold1183 ReadM SNP 0033.scaffold00127 53030 1 T C - ScafM SNP 0033.scaffold00127 53427 2 CC TG scaffold1183 ScafM SNP 0033.scaffold00127 53435 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 53438 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 53474 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53484 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 53515 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 53519 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 53531 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53550 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 53574 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 53618 2 .. CC scaffold1183 ScafM SNP 0033.scaffold00127 53619 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 53636 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53676 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 53700 2 AG TA scaffold1183 ScafM SNP 0033.scaffold00127 53715 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 53717 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 53727 2 TC GT scaffold1183 ScafM SNP 0033.scaffold00127 53757 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 53776 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 53816 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 53818 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 53821 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53824 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53846 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 53850 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 53854 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 53879 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 53912 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 53915 1 A G scaffold1183 ReadM SNP 0033.scaffold00127 54119 1 G A - ReadM SNP 0033.scaffold00127 54132 1 G A - ReadM INDEL 0033.scaffold00127 54152 1 A . - ScafM SNP 0033.scaffold00127 54476 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 54495 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 54504 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 54515 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 54517 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 54528 1 A . scaffold1183 ScafM INDEL 0033.scaffold00127 54548 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 54557 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 54566 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 54573 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 54577 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 54583 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 54596 1 A G scaffold1183 Both SNP 0033.scaffold00127 54725 1 G T scaffold1183 ReadM SNP 0033.scaffold00127 54735 1 C T - ScafM SNP 0033.scaffold00127 55500 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 55513 1 G C scaffold1183 ScafM INDEL 0033.scaffold00127 55519 7 TGACGCC ....... scaffold1183 Both SNP 0033.scaffold00127 55710 1 C T scaffold1183 Both SNP 0033.scaffold00127 55803 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 55840 1 T C scaffold1183 Both SNP 0033.scaffold00127 55887 1 A G scaffold1183 Both SNP 0033.scaffold00127 55929 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 55965 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 55972 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 55975 1 G T scaffold1183 Both SNP 0033.scaffold00127 56019 1 T G scaffold1183 Both INDEL 0033.scaffold00127 56070 1 . A scaffold1183 Both SNP 0033.scaffold00127 56154 1 C A scaffold1183 Both SNP 0033.scaffold00127 56189 1 T A scaffold1183 Both INDEL 0033.scaffold00127 56256 1 . A scaffold1183 Both SNP 0033.scaffold00127 56262 1 T C scaffold1183 Both SNP 0033.scaffold00127 56391 1 A T scaffold1183 Both SNP 0033.scaffold00127 56464 1 G A scaffold1183 Both SNP 0033.scaffold00127 56487 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 56656 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 56661 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 56667 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 56672 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 56681 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 56691 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 56699 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 56718 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 56728 1 T . scaffold1183 ScafM INDEL 0033.scaffold00127 56735 4 .... TAGG scaffold1183 ScafM INDEL 0033.scaffold00127 56736 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 56751 2 AC GG scaffold1183 ScafM INDEL 0033.scaffold00127 56764 5 ..... TTGCC scaffold1183 ScafM INDEL 0033.scaffold00127 56789 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 56797 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 56799 3 AAC GGT scaffold1183 ScafM SNP 0033.scaffold00127 56813 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 56816 2 TA CG scaffold1183 ScafM INDEL 0033.scaffold00127 56819 1 C . scaffold1183 ScafM SNP 0033.scaffold00127 56864 2 TG GA scaffold1183 ScafM SNP 0033.scaffold00127 56880 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 56882 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 56886 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 56894 4 TTTG ...A scaffold1183 ScafM SNP 0033.scaffold00127 56914 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 56919 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 56923 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 56925 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 56929 3 CAC TGT scaffold1183 ScafM SNP 0033.scaffold00127 56935 2 TT CG scaffold1183 ScafM SNP 0033.scaffold00127 56946 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 56951 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 56967 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 56988 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 56994 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 57003 2 AA GG scaffold1183 ScafM SNP 0033.scaffold00127 57007 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 57010 2 TT .G scaffold1183 ScafM INDEL 0033.scaffold00127 57040 3 ... TTG scaffold1183 ScafM INDEL 0033.scaffold00127 57042 1 . T scaffold1183 ScafM INDEL 0033.scaffold00127 57043 4 .... TTGT scaffold1183 ScafM INDEL 0033.scaffold00127 57044 5 ..... CTCTC scaffold1183 ScafM INDEL 0033.scaffold00127 57046 3 ... GGC scaffold1183 ScafM SNP 0033.scaffold00127 57052 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 57056 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 57062 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57076 2 TG CA scaffold1183 ScafM SNP 0033.scaffold00127 57084 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 57087 2 GC AA scaffold1183 ScafM SNP 0033.scaffold00127 57098 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 57124 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 57130 4 .... TTTT scaffold1183 ScafM SNP 0033.scaffold00127 57133 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 57139 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 57142 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 57157 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57171 2 AG TA scaffold1183 ScafM INDEL 0033.scaffold00127 57175 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 57194 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57212 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 57242 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 57278 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57293 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 57308 1 . C scaffold1183 ScafM INDEL 0033.scaffold00127 57314 1 G . scaffold1183 ScafM SNP 0033.scaffold00127 57317 1 T G scaffold1183 Both SNP 0033.scaffold00127 57333 1 G T scaffold1183 Both SNP 0033.scaffold00127 57361 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 57492 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57514 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 57522 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 57540 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 57545 5 GTAGT ..... scaffold1183 ScafM SNP 0033.scaffold00127 57554 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 57584 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 57615 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 57628 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57642 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 57646 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 57650 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57701 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 57711 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57725 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 57738 1 C T scaffold1183 Both SNP 0033.scaffold00127 57751 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57776 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57797 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57851 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 57862 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 57893 2 AA GT scaffold1183 ScafM SNP 0033.scaffold00127 57897 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 57900 2 GT AC scaffold1183 ScafM SNP 0033.scaffold00127 57915 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 57920 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 57924 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 57954 3 TGC CTT scaffold1183 ScafM SNP 0033.scaffold00127 57962 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 57965 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 57987 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 57995 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58009 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58016 1 C G scaffold1183 ScafM SNP 0033.scaffold00127 58018 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 58029 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 58031 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 58034 2 CA TG scaffold1183 ScafM INDEL 0033.scaffold00127 58038 1 G . scaffold1183 ScafM INDEL 0033.scaffold00127 58042 5 GGGGC ..CAA scaffold1183 ScafM SNP 0033.scaffold00127 58048 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 58054 7 TTTAAGA ....... scaffold1183 ScafM INDEL 0033.scaffold00127 58067 2 TC .. scaffold1183 ScafM SNP 0033.scaffold00127 58070 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58073 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 58078 2 AA GT scaffold1183 ScafM SNP 0033.scaffold00127 58099 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 58142 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58151 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 58180 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 58213 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 58220 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58232 2 CC TT scaffold1183 ScafM SNP 0033.scaffold00127 58256 2 TT CA scaffold1183 ScafM SNP 0033.scaffold00127 58270 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 58277 2 TA .. scaffold1183 ScafM INDEL 0033.scaffold00127 58283 1 . A scaffold1183 ScafM INDEL 0033.scaffold00127 58285 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 58288 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 58290 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 58295 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58313 1 T A scaffold1183 ScafM INDEL 0033.scaffold00127 58331 2 TA .. scaffold1183 ScafM INDEL 0033.scaffold00127 58334 3 TTG ... scaffold1183 ScafM INDEL 0033.scaffold00127 58338 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 58355 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 58370 2 AC CG scaffold1183 ScafM SNP 0033.scaffold00127 58373 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 58447 2 AT TC scaffold1183 ScafM SNP 0033.scaffold00127 58457 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 58481 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 58487 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58489 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 58494 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 58501 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 58504 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58516 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58526 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 58553 2 AC GA scaffold1183 ScafM SNP 0033.scaffold00127 58577 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 58584 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 58595 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 58599 1 . A scaffold1183 ScafM SNP 0033.scaffold00127 58624 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58630 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 58656 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58702 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58705 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 58719 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 58742 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 58744 2 AT .G scaffold1183 ScafM SNP 0033.scaffold00127 58748 2 CA TC scaffold1183 ScafM SNP 0033.scaffold00127 58753 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 58764 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 58789 1 G A scaffold1183 Both SNP 0033.scaffold00127 58830 1 G A scaffold1183 Both SNP 0033.scaffold00127 58839 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 58905 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 58911 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 58914 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 58945 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 58948 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 59008 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 59038 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 59044 2 TG CA scaffold1183 Both SNP 0033.scaffold00127 59093 1 G C scaffold1183 Both SNP 0033.scaffold00127 59110 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 59203 28 ............................ TATGTGTGTGTGTGTGTGTGTGTGTGTG scaffold1183 ScafM SNP 0033.scaffold00127 59231 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 59249 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 59259 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 59261 1 A C scaffold1183 ScafM SNP 0033.scaffold00127 59313 2 AA GG scaffold1183 ScafM SNP 0033.scaffold00127 59319 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 59361 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 59410 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 59416 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 59461 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 59468 2 CG TA scaffold1183 ScafM SNP 0033.scaffold00127 59473 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 59494 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 59521 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 59524 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 59565 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 59571 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 59587 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 59595 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 59597 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 59630 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 59639 2 GA CG scaffold1183 ScafM SNP 0033.scaffold00127 59645 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 59867 2 GG TA scaffold1183 ScafM SNP 0033.scaffold00127 59907 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 59912 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 59920 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 67871 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 67898 5 GAACG ..... scaffold1183 ScafM INDEL 0033.scaffold00127 67906 15 AGCCTATGTTTCTTG ............... scaffold1183 ScafM INDEL 0033.scaffold00127 67932 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 67935 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 67937 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 67943 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 67946 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 67951 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 67958 2 AA TC scaffold1183 ScafM SNP 0033.scaffold00127 67961 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 67974 3 TCA GTG scaffold1183 ScafM SNP 0033.scaffold00127 67982 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 67990 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 67997 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 68003 2 TT CA scaffold1183 ScafM SNP 0033.scaffold00127 68015 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 68021 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 68037 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 68164 1 C T scaffold1183 Both INDEL 0033.scaffold00127 68179 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 68314 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 68330 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 68332 1 C A scaffold1183 ScafM INDEL 0033.scaffold00127 68452 5 AAGTT ..... scaffold1183 ScafM INDEL 0033.scaffold00127 68459 11 ACATATTGGAT ........... scaffold1183 ScafM INDEL 0033.scaffold00127 68471 1 C . scaffold1183 ScafM SNP 0033.scaffold00127 68512 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 68560 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 68858 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 69096 8 GTCTTTAT ........ scaffold1183 ScafM INDEL 0033.scaffold00127 69107 3 AGA ..C scaffold1183 ScafM INDEL 0033.scaffold00127 69111 2 AG .. scaffold1183 ScafM SNP 0033.scaffold00127 69132 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 69179 2 AC GA scaffold1183 ScafM SNP 0033.scaffold00127 69518 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 69557 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 69575 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 69611 1 A T scaffold1183 ScafM INDEL 0033.scaffold00127 69663 42 .......................................... CCTATTGCCTTCCATTCATATTTCGAAATTAGGGGAGAAAAA scaffold1183 ScafM SNP 0033.scaffold00127 69677 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 69701 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 69708 1 T G scaffold1183 Both SNP 0033.scaffold00127 69732 1 A G scaffold1183 Both SNP 0033.scaffold00127 69881 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 69895 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 69906 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 69948 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 69969 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 69977 1 A T scaffold1183 Both SNP 0033.scaffold00127 70062 1 A G scaffold1183 Both SNP 0033.scaffold00127 70125 1 T G scaffold1183 Both SNP 0033.scaffold00127 70191 1 G T scaffold1183 Both SNP 0033.scaffold00127 70413 1 G C scaffold1183 ScafM INDEL 0033.scaffold00127 70536 4 .... TATA scaffold1183 ScafM INDEL 0033.scaffold00127 70595 6 GGAAAA ...... scaffold1183 Both SNP 0033.scaffold00127 70622 1 C A scaffold1183 Both SNP 0033.scaffold00127 70680 1 G A scaffold1183 Both SNP 0033.scaffold00127 70696 1 C G scaffold1183 Both SNP 0033.scaffold00127 70722 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 70746 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 70753 2 GA AG scaffold1183 ScafM SNP 0033.scaffold00127 70775 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 70785 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 70820 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 70842 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 70848 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 70851 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 70859 5 AAGAA ....C scaffold1183 ScafM SNP 0033.scaffold00127 70882 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 70884 2 AT CG scaffold1183 ScafM SNP 0033.scaffold00127 70898 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 70905 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 70950 1 A G scaffold1183 Both INDEL 0033.scaffold00127 70954 1 . A scaffold1183 Both SNP 0033.scaffold00127 70990 1 G A scaffold1183 Both SNP 0033.scaffold00127 71065 1 T G scaffold1183 ReadM SNP 0033.scaffold00127 71681 1 A G - ReadM SNP 0033.scaffold00127 71721 1 G T - ReadM SNP 0033.scaffold00127 71769 1 A G - ReadM SNP 0033.scaffold00127 71819 1 G T - ReadM SNP 0033.scaffold00127 71856 1 C T - ReadM SNP 0033.scaffold00127 71870 1 C A - ScafM SNP 0033.scaffold00127 72069 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 72114 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 72138 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 72140 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 72204 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 72209 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 72215 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 72237 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 72286 2 TA .C scaffold1183 ScafM SNP 0033.scaffold00127 72289 1 A C scaffold1183 ScafM INDEL 0033.scaffold00127 72300 2 .. AA scaffold1183 ScafM SNP 0033.scaffold00127 72324 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 72333 1 G T scaffold1183 ScafM INDEL 0033.scaffold00127 72352 2 .. AA scaffold1183 ScafM SNP 0033.scaffold00127 72354 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 72360 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 72362 2 GG AC scaffold1183 ScafM SNP 0033.scaffold00127 72368 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 72373 1 . C scaffold1183 ScafM SNP 0033.scaffold00127 72840 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 72860 1 . A scaffold1183 ScafM INDEL 0033.scaffold00127 72864 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 72985 1 T C scaffold1183 Both SNP 0033.scaffold00127 73144 1 C T scaffold1183 Both SNP 0033.scaffold00127 73147 1 A G scaffold1183 Both SNP 0033.scaffold00127 73150 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 73201 1 T G scaffold1183 Both SNP 0033.scaffold00127 73260 1 G A scaffold1183 Both SNP 0033.scaffold00127 73294 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 73321 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 73348 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 73402 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 73405 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 73408 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 73412 2 TA CT scaffold1183 ScafM INDEL 0033.scaffold00127 73415 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 73423 3 TGG ACT scaffold1183 ScafM SNP 0033.scaffold00127 73428 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 73430 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 73445 4 .... GTTG scaffold1183 ScafM INDEL 0033.scaffold00127 73522 3 ... AAA scaffold1183 ScafM INDEL 0033.scaffold00127 73540 1 A . scaffold1183 ScafM INDEL 0033.scaffold00127 73544 2 GT .. scaffold1183 ScafM SNP 0033.scaffold00127 73547 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 73550 3 TAT ... scaffold1183 ScafM INDEL 0033.scaffold00127 73554 2 TG .. scaffold1183 ScafM SNP 0033.scaffold00127 73629 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 73653 1 T . scaffold1183 ScafM INDEL 0033.scaffold00127 73660 7 ....... TGGGAAC scaffold1183 ScafM INDEL 0033.scaffold00127 73668 1 . G scaffold1183 ScafM SNP 0033.scaffold00127 73703 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 73757 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 73961 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 73973 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 73982 8 ........ TTGGGAAC scaffold1183 ScafM SNP 0033.scaffold00127 73995 2 TG AT scaffold1183 ScafM SNP 0033.scaffold00127 74018 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 75555 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 75603 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 75624 4 TAGA .... scaffold1183 ScafM SNP 0033.scaffold00127 75635 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 75701 1 T . scaffold1183 ScafM SNP 0033.scaffold00127 75713 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 75754 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 75791 1 A . scaffold1183 ScafM SNP 0033.scaffold00127 75812 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 75865 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 75894 4 .... ATAT scaffold1183 ScafM SNP 0033.scaffold00127 75901 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 75905 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 75914 1 T C scaffold1183 ScafM INDEL 0033.scaffold00127 75919 2 .. AT scaffold1183 ScafM SNP 0033.scaffold00127 75955 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 75963 2 TG CA scaffold1183 ScafM SNP 0033.scaffold00127 75968 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 75987 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 75999 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 76008 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 76010 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 76021 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 76026 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 76054 1 T G scaffold1183 ScafM SNP 0033.scaffold00127 76086 2 GC AT scaffold1183 ScafM SNP 0033.scaffold00127 76091 1 C A scaffold1183 ScafM INDEL 0033.scaffold00127 76096 9 ......... TGTTTTCAC scaffold1183 ScafM SNP 0033.scaffold00127 76105 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 76115 2 TC CA scaffold1183 ScafM SNP 0033.scaffold00127 76122 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 76146 4 .... ATGC scaffold1183 ScafM SNP 0033.scaffold00127 76154 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 76171 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 76180 1 G A scaffold1183 ScafM INDEL 0033.scaffold00127 76185 3 ... GAA scaffold1183 ScafM SNP 0033.scaffold00127 81745 1 C T scaffold3685 ScafM INDEL 0033.scaffold00127 81798 1 A . scaffold3685 ScafM SNP 0033.scaffold00127 81806 1 A T scaffold3685 ScafM INDEL 0033.scaffold00127 81829 3 ... AAA scaffold3685 ScafM SNP 0033.scaffold00127 81831 1 G A scaffold3685 ScafM INDEL 0033.scaffold00127 81837 1 . A scaffold3685 ScafM SNP 0033.scaffold00127 81877 1 C A scaffold3685 ScafM SNP 0033.scaffold00127 81898 1 A G scaffold3685 ScafM SNP 0033.scaffold00127 81934 1 T C scaffold3685 ScafM SNP 0033.scaffold00127 81952 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 81955 1 A G scaffold3685 ScafM INDEL 0033.scaffold00127 81975 10 .......... ATTGATCACA scaffold3685 ScafM INDEL 0033.scaffold00127 81978 23 ....................... TCAAATTAGATGGATAATTGAAA scaffold3685 ScafM SNP 0033.scaffold00127 81989 1 T A scaffold3685 ScafM SNP 0033.scaffold00127 82003 1 A G scaffold3685 ScafM INDEL 0033.scaffold00127 82014 1 A . scaffold3685 ScafM SNP 0033.scaffold00127 82039 1 A T scaffold3685 ScafM SNP 0033.scaffold00127 82069 1 A T scaffold3685 ScafM INDEL 0033.scaffold00127 82072 1 C . scaffold3685 ScafM INDEL 0033.scaffold00127 82080 1 G . scaffold3685 ScafM SNP 0033.scaffold00127 82084 1 T C scaffold3685 ScafM SNP 0033.scaffold00127 82098 1 T C scaffold3685 ScafM SNP 0033.scaffold00127 82113 1 A G scaffold3685 ScafM INDEL 0033.scaffold00127 82117 2 TT .. scaffold3685 ScafM SNP 0033.scaffold00127 82125 1 T G scaffold3685 ScafM SNP 0033.scaffold00127 82134 1 C T scaffold3685 ScafM INDEL 0033.scaffold00127 82179 25 AGCCGATTGGTGGAGTCGAGCAGTG ......................... scaffold3685 ScafM INDEL 0033.scaffold00127 82205 1 A . scaffold3685 ScafM SNP 0033.scaffold00127 82228 1 C T scaffold3685 ScafM SNP 0033.scaffold00127 82239 1 G A scaffold3685 ScafM INDEL 0033.scaffold00127 82284 6 AGATCT ...... scaffold3685 ScafM SNP 0033.scaffold00127 82299 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 82312 1 A G scaffold3685 ScafM SNP 0033.scaffold00127 82324 1 T C scaffold3685 ScafM SNP 0033.scaffold00127 82333 1 T A scaffold3685 ScafM INDEL 0033.scaffold00127 82366 13 AGGAGAACGAGGA ............. scaffold3685 ScafM SNP 0033.scaffold00127 82381 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 82386 1 T C scaffold3685 ScafM SNP 0033.scaffold00127 82400 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 82403 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 82417 1 G A scaffold3685 ScafM INDEL 0033.scaffold00127 82438 4 GAAA .... scaffold3685 ScafM SNP 0033.scaffold00127 82443 1 T A scaffold3685 ScafM INDEL 0033.scaffold00127 82499 1 T . scaffold3685 ScafM INDEL 0033.scaffold00127 82507 3 ATC ... scaffold3685 ScafM SNP 0033.scaffold00127 82520 1 G A scaffold3685 ScafM SNP 0033.scaffold00127 82531 1 A G scaffold3685 ScafM SNP 0033.scaffold00127 82581 1 A G scaffold3685 ScafM SNP 0033.scaffold00127 82611 1 G C scaffold3685 ScafM SNP 0033.scaffold00127 85574 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 85582 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 85598 1 A T scaffold1183 ScafM SNP 0033.scaffold00127 85644 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 85663 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 85727 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 85732 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 85746 5 ..... AACTA scaffold1183 ScafM SNP 0033.scaffold00127 85749 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 85752 3 ... ATA scaffold1183 ScafM SNP 0033.scaffold00127 85753 1 C G scaffold1183 ScafM INDEL 0033.scaffold00127 85760 8 ........ TTGTAGGC scaffold1183 ScafM SNP 0033.scaffold00127 85777 1 G T scaffold1183 ScafM SNP 0033.scaffold00127 85782 1 T A scaffold1183 ScafM SNP 0033.scaffold00127 85815 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 85831 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 85844 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 85848 1 A G scaffold1183 ScafM SNP 0033.scaffold00127 85858 1 G A scaffold1183 ScafM SNP 0033.scaffold00127 85911 1 A G scaffold1183 ScafM INDEL 0033.scaffold00127 85924 1 . A scaffold1183 ScafM INDEL 0033.scaffold00127 85954 25 CTTTCATAACTTCATTCATTGCCAA ......................... scaffold1183 ScafM SNP 0033.scaffold00127 85991 1 T C scaffold1183 ScafM SNP 0033.scaffold00127 86003 1 C T scaffold1183 ScafM SNP 0033.scaffold00127 86020 1 C T scaffold1183 ScafM INDEL 0033.scaffold00127 86035 1 . T scaffold1183 ScafM SNP 0033.scaffold00127 86099 1 G C scaffold1183 ScafM SNP 0033.scaffold00127 86152 1 C A scaffold1183 ScafM SNP 0033.scaffold00127 86306 1 A G scaffold32454 ScafM SNP 0033.scaffold00127 86312 1 T C scaffold32454 ScafM SNP 0033.scaffold00127 86326 1 T C scaffold32454 ScafM SNP 0033.scaffold00127 86328 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 86332 1 A G scaffold32454 ScafM SNP 0033.scaffold00127 86353 1 A G scaffold32454 ScafM SNP 0033.scaffold00127 86388 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 86412 1 G A scaffold32454 ScafM INDEL 0033.scaffold00127 86447 1 . C scaffold32454 ScafM SNP 0033.scaffold00127 86452 1 C T scaffold32454 ScafM SNP 0033.scaffold00127 86527 1 G T scaffold32454 ScafM SNP 0033.scaffold00127 86531 1 C T scaffold32454 ScafM SNP 0033.scaffold00127 86543 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 86559 1 C A scaffold32454 ScafM SNP 0033.scaffold00127 86991 1 T G scaffold32454 ScafM INDEL 0033.scaffold00127 87019 1 A . scaffold32454 ScafM SNP 0033.scaffold00127 87065 1 C T scaffold32454 ScafM SNP 0033.scaffold00127 87101 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 87135 1 T C scaffold32454 ScafM INDEL 0033.scaffold00127 87150 17 ................. TGGAGTACTTCACAGTC scaffold32454 ScafM SNP 0033.scaffold00127 87186 1 A G scaffold32454 ScafM SNP 0033.scaffold00127 87215 1 C T scaffold32454 ScafM SNP 0033.scaffold00127 87231 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 87265 1 A T scaffold32454 ScafM SNP 0033.scaffold00127 87283 1 T C scaffold32454 ScafM SNP 0033.scaffold00127 87291 1 A G scaffold32454 Both SNP 0033.scaffold00127 87784 1 C G scaffold32454 Both SNP 0033.scaffold00127 87796 1 A G scaffold32454 Both SNP 0033.scaffold00127 87858 1 C G scaffold32454 Both SNP 0033.scaffold00127 87879 1 A T scaffold32454 Both SNP 0033.scaffold00127 87894 1 T C scaffold32454 Both SNP 0033.scaffold00127 87960 1 A G scaffold32454 ScafM INDEL 0033.scaffold00127 87986 3 ATA ... scaffold32454 Both SNP 0033.scaffold00127 88046 1 C A scaffold32454 Both SNP 0033.scaffold00127 88081 1 G C scaffold32454 Both SNP 0033.scaffold00127 88085 1 A T scaffold32454 Both SNP 0033.scaffold00127 88703 1 G A scaffold32454 ScafM SNP 0033.scaffold00127 89002 1 T A scaffold32454 ScafM SNP 0033.scaffold00127 89015 1 A G scaffold32454 ReadM SNP 0033.scaffold00127 89708 1 A G - ReadM SNP 0033.scaffold00127 89951 1 C T - ReadM SNP 0033.scaffold00127 89983 1 C T - ScafM INDEL 0033.scaffold00127 90222 3 ATT ... scaffold15384 ScafM SNP 0033.scaffold00127 90228 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 90317 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 90416 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 90429 1 T G scaffold15384 ScafM SNP 0033.scaffold00127 90463 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 90473 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 90476 1 G A scaffold15384 Both SNP 0033.scaffold00127 90542 1 A G scaffold15384 Both SNP 0033.scaffold00127 90606 1 G T scaffold15384 Both SNP 0033.scaffold00127 90633 1 G C scaffold15384 Both SNP 0033.scaffold00127 90644 1 G C scaffold15384 Both SNP 0033.scaffold00127 90699 1 A T scaffold15384 Both SNP 0033.scaffold00127 90713 1 C T scaffold15384 Both SNP 0033.scaffold00127 90893 1 T A scaffold15384 ReadM SNP 0033.scaffold00127 90967 1 A G - ReadM SNP 0033.scaffold00127 91016 1 T C - ReadM SNP 0033.scaffold00127 91036 1 A G - ReadM INDEL 0033.scaffold00127 91068 1 . A - ScafM INDEL 0033.scaffold00127 91400 3 ... TAT scaffold15384 ScafM SNP 0033.scaffold00127 91406 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 91467 1 G T scaffold15384 Both SNP 0033.scaffold00127 91651 1 G T scaffold15384 ScafM INDEL 0033.scaffold00127 91723 9 ......... TAATATGTG scaffold15384 ScafM INDEL 0033.scaffold00127 91899 1 . T scaffold15384 Both INDEL 0033.scaffold00127 92178 1 . C scaffold15384 ReadM SNP 0033.scaffold00127 92225 1 G A - ReadM SNP 0033.scaffold00127 92296 1 G A - ReadM SNP 0033.scaffold00127 92310 1 A G - ReadM SNP 0033.scaffold00127 92437 1 T C - ReadM SNP 0033.scaffold00127 92479 1 A T - ReadM SNP 0033.scaffold00127 92486 1 T C - ReadM SNP 0033.scaffold00127 92552 1 C T - ReadM SNP 0033.scaffold00127 92791 1 A C - ReadM SNP 0033.scaffold00127 92850 1 A T - Both SNP 0033.scaffold00127 93026 1 A T scaffold15384 Both SNP 0033.scaffold00127 93038 1 A T scaffold15384 Both INDEL 0033.scaffold00127 93112 2 .. GA scaffold15384 Both SNP 0033.scaffold00127 93193 1 C T scaffold15384 ReadM SNP 0033.scaffold00127 93320 1 G A - ScafM SNP 0033.scaffold00127 93668 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 93737 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 93772 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 93880 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 93922 2 CC TT scaffold15384 ReadM SNP 0033.scaffold00127 95310 1 T C - Both SNP 0033.scaffold00127 95334 1 G T scaffold15384 Both SNP 0033.scaffold00127 95390 1 T C scaffold15384 Both SNP 0033.scaffold00127 95398 1 G C scaffold15384 ScafM INDEL 0033.scaffold00127 95545 1 . T scaffold15384 ScafM SNP 0033.scaffold00127 95555 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 95558 5 AAATT ..... scaffold15384 Both SNP 0033.scaffold00127 95729 1 G A scaffold15384 Both SNP 0033.scaffold00127 95774 1 A G scaffold15384 Both SNP 0033.scaffold00127 95815 1 A C scaffold15384 Both SNP 0033.scaffold00127 95845 1 T A scaffold15384 ScafM INDEL 0033.scaffold00127 95853 1 A . scaffold15384 ScafM SNP 0033.scaffold00127 95870 1 A G scaffold15384 Both SNP 0033.scaffold00127 95885 1 G A scaffold15384 Both SNP 0033.scaffold00127 95943 1 A T scaffold15384 Both SNP 0033.scaffold00127 95960 1 T G scaffold15384 Both SNP 0033.scaffold00127 96004 1 C A scaffold15384 Both SNP 0033.scaffold00127 96192 1 G T scaffold15384 Both SNP 0033.scaffold00127 96393 1 A G scaffold15384 Both SNP 0033.scaffold00127 96403 1 G C scaffold15384 Both SNP 0033.scaffold00127 96506 1 T C scaffold15384 Both SNP 0033.scaffold00127 96557 1 G C scaffold15384 Both SNP 0033.scaffold00127 96576 1 T C scaffold15384 Both SNP 0033.scaffold00127 96640 1 A G scaffold15384 Both INDEL 0033.scaffold00127 96654 1 A . scaffold15384 Both SNP 0033.scaffold00127 96685 1 T C scaffold15384 Both SNP 0033.scaffold00127 96713 1 T G scaffold15384 ReadM SNP 0033.scaffold00127 96834 1 T G - ReadM INDEL 0033.scaffold00127 96947 1 C . - ReadM SNP 0033.scaffold00127 97005 1 G T - ReadM SNP 0033.scaffold00127 97222 1 C A - ReadM SNP 0033.scaffold00127 97322 1 A C - ReadM SNP 0033.scaffold00127 97399 1 G T - ReadM SNP 0033.scaffold00127 97409 1 T C - ReadM SNP 0033.scaffold00127 97512 1 C G - Both SNP 0033.scaffold00127 97582 1 T C scaffold15384 Both SNP 0033.scaffold00127 97615 1 C T scaffold15384 Both SNP 0033.scaffold00127 97764 2 CA GT scaffold15384 Both SNP 0033.scaffold00127 97858 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 97908 1 A T scaffold15384 Both SNP 0033.scaffold00127 97975 1 T C scaffold15384 Both SNP 0033.scaffold00127 98017 1 A G scaffold15384 Both SNP 0033.scaffold00127 98121 1 A G scaffold15384 Both SNP 0033.scaffold00127 98145 1 T C scaffold15384 Both SNP 0033.scaffold00127 98198 1 G A scaffold15384 ScafM INDEL 0033.scaffold00127 98228 3 ... TAT scaffold15384 ScafM SNP 0033.scaffold00127 98265 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 98278 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 98332 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 98334 1 G C scaffold15384 Both SNP 0033.scaffold00127 98354 1 A G scaffold15384 Both SNP 0033.scaffold00127 98384 1 C T scaffold15384 Both SNP 0033.scaffold00127 98405 1 G A scaffold15384 ReadM SNP 0033.scaffold00127 98537 1 C T - ReadM SNP 0033.scaffold00127 98580 1 G T - ReadM SNP 0033.scaffold00127 98626 1 G C - ReadM SNP 0033.scaffold00127 98678 1 A G - ReadM SNP 0033.scaffold00127 98711 2 CA TG - ReadM SNP 0033.scaffold00127 98748 1 T C - ReadM SNP 0033.scaffold00127 99133 1 T C - ReadM SNP 0033.scaffold00127 99146 1 G C - ReadM SNP 0033.scaffold00127 99172 1 A C - ReadM SNP 0033.scaffold00127 99215 1 T C - ReadM SNP 0033.scaffold00127 99256 1 G T - ReadM SNP 0033.scaffold00127 99328 1 C T - ReadM SNP 0033.scaffold00127 99335 1 C G - ReadM SNP 0033.scaffold00127 99440 1 T C - ReadM SNP 0033.scaffold00127 99688 1 A G - ReadM SNP 0033.scaffold00127 99712 1 T G - ReadM SNP 0033.scaffold00127 99849 1 C T - ReadM SNP 0033.scaffold00127 99903 1 G A - ReadM SNP 0033.scaffold00127 99949 2 TA CC - ReadM SNP 0033.scaffold00127 100031 1 T C - ReadM SNP 0033.scaffold00127 100144 1 A T - ReadM SNP 0033.scaffold00127 100193 1 G A - ReadM SNP 0033.scaffold00127 100226 1 C T - ReadM SNP 0033.scaffold00127 100276 1 G T - ReadM SNP 0033.scaffold00127 100300 1 T C - ReadM SNP 0033.scaffold00127 100349 1 C T - ReadM SNP 0033.scaffold00127 100376 1 G T - ReadM INDEL 0033.scaffold00127 100420 2 AA .. - Both SNP 0033.scaffold00127 100551 1 G A scaffold15384 Both SNP 0033.scaffold00127 100610 1 C A scaffold15384 Both SNP 0033.scaffold00127 100616 1 C T scaffold15384 ScafM INDEL 0033.scaffold00127 100625 1 . A scaffold15384 Both SNP 0033.scaffold00127 100654 1 C T scaffold15384 Both SNP 0033.scaffold00127 100746 1 T G scaffold15384 Both SNP 0033.scaffold00127 100754 1 C T scaffold15384 Both SNP 0033.scaffold00127 100785 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 100849 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 100856 1 C T scaffold15384 Both SNP 0033.scaffold00127 100876 1 G A scaffold15384 Both SNP 0033.scaffold00127 100892 1 C A scaffold15384 ScafM SNP 0033.scaffold00127 100950 1 C T scaffold15384 ScafM INDEL 0033.scaffold00127 100979 2 AT .. scaffold15384 ScafM INDEL 0033.scaffold00127 100992 4 GGGA .... scaffold15384 ScafM SNP 0033.scaffold00127 101416 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 101514 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 101582 1 C G scaffold15384 ScafM SNP 0033.scaffold00127 101602 1 A T scaffold15384 ScafM INDEL 0033.scaffold00127 101611 1 A . scaffold15384 ScafM SNP 0033.scaffold00127 101916 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 101944 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 101959 1 G A scaffold15384 ScafM INDEL 0033.scaffold00127 101960 1 . C scaffold15384 ScafM INDEL 0033.scaffold00127 101964 1 A . scaffold15384 ScafM SNP 0033.scaffold00127 101974 1 A T scaffold15384 ScafM SNP 0033.scaffold00127 101978 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 102026 3 GTA ... scaffold15384 ScafM SNP 0033.scaffold00127 102041 1 C A scaffold15384 ScafM INDEL 0033.scaffold00127 102050 3 CTA ... scaffold15384 ScafM SNP 0033.scaffold00127 102068 1 A T scaffold15384 ScafM INDEL 0033.scaffold00127 102072 8 CACCAAGG ........ scaffold15384 ScafM INDEL 0033.scaffold00127 102111 6 CTGGTT ...... scaffold15384 ScafM SNP 0033.scaffold00127 102141 1 C T scaffold15384 ScafM INDEL 0033.scaffold00127 102223 8 ACTATGCA ........ scaffold15384 ScafM SNP 0033.scaffold00127 102255 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 102275 1 T C scaffold15384 ScafM INDEL 0033.scaffold00127 102380 1 . A scaffold15384 ScafM SNP 0033.scaffold00127 102483 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 102545 1 A T scaffold15384 ScafM SNP 0033.scaffold00127 102547 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 102550 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 102553 1 T G scaffold15384 ScafM INDEL 0033.scaffold00127 102559 7 TATTGAG ....... scaffold15384 ScafM SNP 0033.scaffold00127 102618 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 102723 1 A C scaffold15384 ScafM SNP 0033.scaffold00127 102725 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 103781 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 103785 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 103791 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 103815 3 ... ATA scaffold15384 ScafM SNP 0033.scaffold00127 103902 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 103916 1 T C scaffold15384 ScafM INDEL 0033.scaffold00127 103936 1 C . scaffold15384 ScafM INDEL 0033.scaffold00127 103942 1 . G scaffold15384 ScafM SNP 0033.scaffold00127 103959 1 T G scaffold15384 ScafM SNP 0033.scaffold00127 103963 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 103986 1 . A scaffold15384 ScafM INDEL 0033.scaffold00127 104013 4 .... TATA scaffold15384 ScafM SNP 0033.scaffold00127 104025 1 T A scaffold15384 ScafM INDEL 0033.scaffold00127 104048 2 .. AC scaffold15384 ScafM INDEL 0033.scaffold00127 104050 5 ..... TATAT scaffold15384 ScafM INDEL 0033.scaffold00127 104052 1 . G scaffold15384 ScafM SNP 0033.scaffold00127 104073 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 104084 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 104098 1 A T scaffold15384 ScafM SNP 0033.scaffold00127 104101 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 104106 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 104110 1 G C scaffold15384 ScafM INDEL 0033.scaffold00127 104148 4 TGCA .... scaffold15384 ScafM SNP 0033.scaffold00127 104178 2 CA GT scaffold15384 ScafM SNP 0033.scaffold00127 104238 2 GT TG scaffold15384 ScafM INDEL 0033.scaffold00127 104327 3 ... TAA scaffold15384 ScafM INDEL 0033.scaffold00127 104403 2 AA .. scaffold15384 ScafM INDEL 0033.scaffold00127 104407 2 AA .G scaffold15384 ScafM SNP 0033.scaffold00127 104430 1 T C scaffold15384 ScafM INDEL 0033.scaffold00127 104431 5 ..... ACAAT scaffold15384 ScafM SNP 0033.scaffold00127 104491 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 104503 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 104508 1 C A scaffold15384 ScafM INDEL 0033.scaffold00127 104559 3 TAA ... scaffold15384 ScafM SNP 0033.scaffold00127 104607 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 104624 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 104635 1 T C scaffold15384 ScafM INDEL 0033.scaffold00127 104641 1 . A scaffold15384 ScafM SNP 0033.scaffold00127 104677 1 T C scaffold15384 ScafM INDEL 0033.scaffold00127 104985 1 . T scaffold15384 ScafM SNP 0033.scaffold00127 105024 1 G C scaffold15384 ScafM INDEL 0033.scaffold00127 105035 2 TT .. scaffold15384 ScafM SNP 0033.scaffold00127 105055 1 G T scaffold15384 ScafM INDEL 0033.scaffold00127 105068 1 . A scaffold15384 ScafM SNP 0033.scaffold00127 105073 1 C A scaffold15384 ScafM SNP 0033.scaffold00127 105098 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 105115 1 C A scaffold15384 ScafM SNP 0033.scaffold00127 105141 1 G A scaffold15384 ScafM INDEL 0033.scaffold00127 105184 5 TTTAT ..... scaffold15384 ScafM INDEL 0033.scaffold00127 105192 5 TTTCC ..... scaffold15384 ScafM INDEL 0033.scaffold00127 105200 2 CT .. scaffold15384 ScafM SNP 0033.scaffold00127 105203 1 T A scaffold15384 ScafM INDEL 0033.scaffold00127 105237 23 AACCATAGCAATTTCTCCACTCT ....................... scaffold15384 ScafM SNP 0033.scaffold00127 105304 1 A C scaffold15384 ScafM INDEL 0033.scaffold00127 105395 1 . T scaffold15384 Both SNP 0033.scaffold00127 105450 1 A C scaffold15384 Both INDEL 0033.scaffold00127 105526 1 A . scaffold15384 Both SNP 0033.scaffold00127 105557 1 A T scaffold15384 Both SNP 0033.scaffold00127 105562 1 T G scaffold15384 Both SNP 0033.scaffold00127 105592 1 C T scaffold15384 Both SNP 0033.scaffold00127 105713 1 T C scaffold15384 ReadM INDEL 0033.scaffold00127 105893 3 ATG ... - ScafM SNP 0033.scaffold00127 105932 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 105941 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 105944 1 T C scaffold15384 Both INDEL 0033.scaffold00127 106145 3 ... GAT scaffold15384 Both SNP 0033.scaffold00127 106289 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 106561 7 TTGTGTT ....... scaffold15384 ScafM INDEL 0033.scaffold00127 106781 3 ... AAA scaffold15384 ScafM SNP 0033.scaffold00127 106902 1 A G scaffold15384 Both SNP 0033.scaffold00127 107014 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 107101 1 C T scaffold15384 ScafM INDEL 0033.scaffold00127 107113 2 AA .C scaffold15384 ScafM SNP 0033.scaffold00127 107117 1 C A scaffold15384 ScafM INDEL 0033.scaffold00127 107124 2 .. TA scaffold15384 ScafM SNP 0033.scaffold00127 107154 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 107162 1 G A scaffold15384 ScafM SNP 0033.scaffold00127 107164 1 A T scaffold15384 ScafM SNP 0033.scaffold00127 107191 3 CCA TTC scaffold15384 ScafM SNP 0033.scaffold00127 107196 2 AA CG scaffold15384 ScafM SNP 0033.scaffold00127 107211 1 A T scaffold15384 ScafM SNP 0033.scaffold00127 107255 1 T A scaffold15384 ScafM INDEL 0033.scaffold00127 107277 1 T . scaffold15384 ScafM INDEL 0033.scaffold00127 107279 1 T . scaffold15384 ScafM SNP 0033.scaffold00127 107290 1 A T scaffold15384 ScafM INDEL 0033.scaffold00127 107314 2 .G AA scaffold15384 ScafM SNP 0033.scaffold00127 107322 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 107334 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 107358 2 TT CC scaffold15384 ScafM SNP 0033.scaffold00127 107361 1 G A scaffold15384 ScafM INDEL 0033.scaffold00127 107412 1 A . scaffold15384 ScafM INDEL 0033.scaffold00127 107451 1 . A scaffold15384 ScafM INDEL 0033.scaffold00127 107467 2 .T GA scaffold15384 ScafM SNP 0033.scaffold00127 107471 1 T A scaffold15384 ScafM INDEL 0033.scaffold00127 107479 4 .... ATAT scaffold15384 ScafM SNP 0033.scaffold00127 107493 1 G A scaffold15384 ScafM INDEL 0033.scaffold00127 107505 1 T . scaffold15384 ScafM SNP 0033.scaffold00127 107509 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 107526 1 C T scaffold15384 ScafM SNP 0033.scaffold00127 108086 1 A G scaffold15384 ScafM SNP 0033.scaffold00127 108124 1 A G scaffold15384 ScafM INDEL 0033.scaffold00127 108154 1 . A scaffold15384 ScafM SNP 0033.scaffold00127 108178 1 G T scaffold15384 ScafM SNP 0033.scaffold00127 108567 1 T G scaffold15384 ScafM INDEL 0033.scaffold00127 108617 3 AAA ... scaffold15384 ScafM SNP 0033.scaffold00127 108664 1 G T scaffold15384 ScafM SNP 0033.scaffold00127 108672 1 T C scaffold15384 ScafM SNP 0033.scaffold00127 108717 1 T A scaffold15384 ScafM SNP 0033.scaffold00127 121588 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 121702 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 121711 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 121731 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 121808 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 121810 4 .... ATTG scaffold3714 ScafM SNP 0033.scaffold00127 121818 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 121822 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 121835 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 121849 4 .... AAAA scaffold3714 ScafM SNP 0033.scaffold00127 121871 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 121906 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 121922 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 121943 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 122292 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 122311 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 122319 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 122330 1 G C scaffold3714 ScafM INDEL 0033.scaffold00127 122332 1 . A scaffold3714 ScafM INDEL 0033.scaffold00127 122343 4 .... ATAA scaffold3714 ScafM SNP 0033.scaffold00127 122369 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 122381 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 122425 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 122427 3 ATT ... scaffold3714 ScafM SNP 0033.scaffold00127 122432 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 122629 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 122632 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 122637 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 122642 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 122676 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 122688 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 122723 2 GC TT scaffold3714 ScafM SNP 0033.scaffold00127 122751 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 122777 2 TT GC scaffold3714 ScafM SNP 0033.scaffold00127 122784 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 122811 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 122813 2 AT GA scaffold3714 ScafM SNP 0033.scaffold00127 122817 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 122825 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 122828 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 122830 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 122840 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 122863 1 G . scaffold3714 ScafM INDEL 0033.scaffold00127 122878 1 C . scaffold3714 ScafM SNP 0033.scaffold00127 122905 1 C G scaffold3714 ScafM INDEL 0033.scaffold00127 122908 3 TGT ... scaffold3714 ScafM SNP 0033.scaffold00127 122927 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 122945 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 122955 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 122960 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 122974 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 122995 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 123481 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 123494 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 123549 2 .T GA scaffold3714 ScafM SNP 0033.scaffold00127 123568 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 123585 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 123593 3 TAG ... scaffold3714 ScafM SNP 0033.scaffold00127 123601 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 123617 2 AG .. scaffold3714 Both SNP 0033.scaffold00127 123769 1 G A scaffold3714 Both SNP 0033.scaffold00127 123869 1 C T scaffold3714 Both SNP 0033.scaffold00127 123918 1 T A scaffold3714 Both SNP 0033.scaffold00127 123926 1 C T scaffold3714 Both SNP 0033.scaffold00127 123992 1 G C scaffold3714 Both SNP 0033.scaffold00127 124031 1 G A scaffold3714 Both SNP 0033.scaffold00127 124036 1 A C scaffold3714 Both SNP 0033.scaffold00127 124142 1 T C scaffold3714 Both SNP 0033.scaffold00127 124156 1 C T scaffold3714 Both SNP 0033.scaffold00127 124178 1 T C scaffold3714 Both SNP 0033.scaffold00127 124181 1 G A scaffold3714 Both SNP 0033.scaffold00127 124328 1 C T scaffold3714 Both SNP 0033.scaffold00127 124330 1 A C scaffold3714 Both SNP 0033.scaffold00127 124341 1 T A scaffold3714 Both INDEL 0033.scaffold00127 124527 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 124530 2 TT CC scaffold3714 Both SNP 0033.scaffold00127 124621 1 G A scaffold3714 Both SNP 0033.scaffold00127 124647 1 A C scaffold3714 Both SNP 0033.scaffold00127 124658 1 T G scaffold3714 ScafM INDEL 0033.scaffold00127 124699 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 124703 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 124711 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 124718 1 A G scaffold3714 Both SNP 0033.scaffold00127 124733 1 G A scaffold3714 Both SNP 0033.scaffold00127 124755 1 G A scaffold3714 Both INDEL 0033.scaffold00127 124839 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 124860 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 124883 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 124885 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 124886 2 .. GA scaffold3714 Both SNP 0033.scaffold00127 124909 1 G A scaffold3714 Both SNP 0033.scaffold00127 124930 1 A G scaffold3714 Both SNP 0033.scaffold00127 124954 1 A G scaffold3714 Both SNP 0033.scaffold00127 125016 1 A T scaffold3714 Both SNP 0033.scaffold00127 125034 1 A G scaffold3714 Both SNP 0033.scaffold00127 125136 1 G A scaffold3714 Both SNP 0033.scaffold00127 125185 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 125205 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 125222 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 125226 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 125228 1 A . scaffold3714 Both SNP 0033.scaffold00127 125249 1 T C scaffold3714 Both SNP 0033.scaffold00127 125260 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 125422 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 125443 2 AG TA scaffold3714 ScafM SNP 0033.scaffold00127 125452 1 T C scaffold3714 Both INDEL 0033.scaffold00127 125568 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 125579 1 T C scaffold3714 Both SNP 0033.scaffold00127 125582 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 125856 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 125866 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 125870 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 125875 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 125905 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 125916 2 AT GA scaffold3714 ScafM SNP 0033.scaffold00127 125935 1 A C scaffold3714 Both INDEL 0033.scaffold00127 125988 1 . A scaffold3714 Both SNP 0033.scaffold00127 126017 1 C T scaffold3714 Both SNP 0033.scaffold00127 126028 1 G C scaffold3714 Both SNP 0033.scaffold00127 126061 1 G A scaffold3714 Both SNP 0033.scaffold00127 126224 1 A G scaffold3714 Both SNP 0033.scaffold00127 126277 1 A G scaffold3714 Both INDEL 0033.scaffold00127 126319 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 126326 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 126369 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 126378 3 ... ATC scaffold3714 ScafM INDEL 0033.scaffold00127 126379 5 ..... TTTAT scaffold3714 Both SNP 0033.scaffold00127 126464 1 G A scaffold3714 Both SNP 0033.scaffold00127 126491 1 G A scaffold3714 Both SNP 0033.scaffold00127 126503 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 126583 1 . A scaffold3714 ScafM INDEL 0033.scaffold00127 126594 2 .. AA scaffold3714 Both SNP 0033.scaffold00127 126655 1 G A scaffold3714 Both SNP 0033.scaffold00127 126670 1 G A scaffold3714 Both SNP 0033.scaffold00127 126685 1 C G scaffold3714 ReadM INDEL 0033.scaffold00127 126900 1 . T - ReadM INDEL 0033.scaffold00127 126961 1 C . - ScafM INDEL 0033.scaffold00127 126961 2 CC .A scaffold3714 Both SNP 0033.scaffold00127 127032 1 T A scaffold3714 Both SNP 0033.scaffold00127 127065 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 127096 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 127116 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 127137 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 127147 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 127154 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 127167 1 A G scaffold3714 Both SNP 0033.scaffold00127 127182 1 G T scaffold3714 Both SNP 0033.scaffold00127 127241 1 G C scaffold3714 Both SNP 0033.scaffold00127 127314 1 G A scaffold3714 Both SNP 0033.scaffold00127 127333 1 T C scaffold3714 Both SNP 0033.scaffold00127 127343 1 T C scaffold3714 Both SNP 0033.scaffold00127 127409 1 A C scaffold3714 Both SNP 0033.scaffold00127 127424 1 A T scaffold3714 Both SNP 0033.scaffold00127 127451 1 C T scaffold3714 Both SNP 0033.scaffold00127 127471 1 C T scaffold3714 Both SNP 0033.scaffold00127 127506 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 127541 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 127563 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 127565 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 127579 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 127584 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 127628 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 127643 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 127648 2 AC GA scaffold3714 ScafM SNP 0033.scaffold00127 127664 1 T G scaffold3714 Both SNP 0033.scaffold00127 127768 1 T A scaffold3714 Both SNP 0033.scaffold00127 127787 1 T C scaffold3714 Both SNP 0033.scaffold00127 127868 1 A T scaffold3714 Both SNP 0033.scaffold00127 128025 1 G A scaffold3714 Both SNP 0033.scaffold00127 128048 1 G A scaffold3714 Both SNP 0033.scaffold00127 128141 1 G A scaffold3714 Both SNP 0033.scaffold00127 128165 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 128265 22 ...................... TTTATGGTGAAAGTTGAAACTC scaffold3714 ScafM SNP 0033.scaffold00127 128274 2 GC AT scaffold3714 Both SNP 0033.scaffold00127 128460 1 A G scaffold3714 Both SNP 0033.scaffold00127 128544 1 A G scaffold3714 Both INDEL 0033.scaffold00127 128701 1 T . scaffold3714 Both SNP 0033.scaffold00127 128723 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 128731 1 A T scaffold3714 Both SNP 0033.scaffold00127 128893 1 T A scaffold3714 Both INDEL 0033.scaffold00127 128912 2 TA .. scaffold3714 ScafM SNP 0033.scaffold00127 128962 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 128966 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 128973 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 129022 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 129029 4 .... TGTC scaffold3714 ScafM INDEL 0033.scaffold00127 129063 2 AT .. scaffold3714 ScafM SNP 0033.scaffold00127 129555 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 129576 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 129587 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 129599 1 . G scaffold3714 ScafM INDEL 0033.scaffold00127 129600 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 129631 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 129659 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 129667 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 129669 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 129680 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 129693 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 129701 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 129856 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 129870 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 129872 1 A T scaffold3714 ScafM INDEL 0033.scaffold00127 129875 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 129895 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 129929 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 129951 3 ... TGT scaffold3714 ScafM INDEL 0033.scaffold00127 129954 3 ..T GCG scaffold3714 ScafM SNP 0033.scaffold00127 129967 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 129984 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 129992 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 130007 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 130045 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 130047 3 GAA ..T scaffold3714 ScafM SNP 0033.scaffold00127 130056 2 GG AA scaffold3714 ScafM SNP 0033.scaffold00127 130073 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 130079 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 130094 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 130097 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 130099 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 130339 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 130344 2 AC GT scaffold3714 ScafM SNP 0033.scaffold00127 130362 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 130397 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 130474 6 ...... AGTCTA scaffold3714 ScafM INDEL 0033.scaffold00127 130532 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 133282 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 133287 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 133318 7 GGTCAAA ....... scaffold3714 ScafM SNP 0033.scaffold00127 133335 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 133345 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 133357 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 133384 2 TG AA scaffold3714 ScafM SNP 0033.scaffold00127 133412 3 GAC AGT scaffold3714 ScafM INDEL 0033.scaffold00127 133419 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 133455 2 GT CC scaffold3714 ScafM SNP 0033.scaffold00127 133469 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 133494 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 133523 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 133542 7 ....... AGATGCA scaffold3714 ScafM SNP 0033.scaffold00127 133564 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 133567 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 133571 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 133573 2 CA TG scaffold3714 ScafM SNP 0033.scaffold00127 133596 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 133601 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 133623 1 T . scaffold3714 ScafM INDEL 0033.scaffold00127 133627 27 ATAAATTATTAAAAAAACGAACACGAT ........................... scaffold3714 ScafM SNP 0033.scaffold00127 133703 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 133721 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 133736 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 133741 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 133745 1 T G scaffold3714 ScafM INDEL 0033.scaffold00127 133747 1 C . scaffold3714 ScafM SNP 0033.scaffold00127 137511 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 137762 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 137778 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 137830 3 TTC ... scaffold3714 Both SNP 0033.scaffold00127 137876 1 C T scaffold3714 Both SNP 0033.scaffold00127 137880 1 G A scaffold3714 Both SNP 0033.scaffold00127 137958 1 T C scaffold3714 Both SNP 0033.scaffold00127 137961 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 138014 4 ...C AAAA scaffold3714 Both SNP 0033.scaffold00127 138077 1 A G scaffold3714 Both SNP 0033.scaffold00127 138084 1 T C scaffold3714 Both SNP 0033.scaffold00127 138249 1 A G scaffold3714 Both SNP 0033.scaffold00127 138337 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 138382 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 138408 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 138423 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 138439 2 GG AA scaffold3714 ScafM INDEL 0033.scaffold00127 138451 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 138458 1 A G scaffold3714 ReadM SNP 0033.scaffold00127 139181 1 G A - ReadM SNP 0033.scaffold00127 139192 1 G C - ReadM SNP 0033.scaffold00127 139197 1 C T - ReadM SNP 0033.scaffold00127 139355 1 G A - ReadM SNP 0033.scaffold00127 139391 1 T C - ReadM SNP 0033.scaffold00127 139453 1 G A - ReadM SNP 0033.scaffold00127 139617 1 T A - ReadM SNP 0033.scaffold00127 139623 1 G T - ReadM SNP 0033.scaffold00127 139729 1 C T - ReadM SNP 0033.scaffold00127 139770 1 G A - ReadM SNP 0033.scaffold00127 140017 1 A G - ReadM SNP 0033.scaffold00127 140050 1 G T - ReadM SNP 0033.scaffold00127 140071 1 C T - ReadM SNP 0033.scaffold00127 140138 1 A T - ReadM SNP 0033.scaffold00127 140150 1 A T - ReadM SNP 0033.scaffold00127 140270 1 A G - ReadM SNP 0033.scaffold00127 140432 1 C T - ReadM SNP 0033.scaffold00127 140483 1 G A - ReadM SNP 0033.scaffold00127 140575 1 G T - ReadM SNP 0033.scaffold00127 140577 1 A T - ReadM SNP 0033.scaffold00127 140646 1 G A - ReadM SNP 0033.scaffold00127 140918 1 A C - ReadM SNP 0033.scaffold00127 140944 1 A G - ReadM SNP 0033.scaffold00127 140964 1 A G - ReadM SNP 0033.scaffold00127 141002 1 A G - ReadM SNP 0033.scaffold00127 141085 1 T A - ReadM SNP 0033.scaffold00127 141116 1 C A - ReadM INDEL 0033.scaffold00127 141307 1 A . - ReadM SNP 0033.scaffold00127 141326 1 G C - ReadM SNP 0033.scaffold00127 141341 1 T A - ReadM INDEL 0033.scaffold00127 141447 1 . A - ReadM SNP 0033.scaffold00127 141465 1 C T - ReadM SNP 0033.scaffold00127 141640 1 A G - ReadM SNP 0033.scaffold00127 141661 1 G T - ReadM SNP 0033.scaffold00127 141824 1 T C - ReadM SNP 0033.scaffold00127 141888 1 T G - ReadM SNP 0033.scaffold00127 141893 1 C G - ReadM SNP 0033.scaffold00127 142022 1 T C - ReadM SNP 0033.scaffold00127 142029 1 G C - ReadM SNP 0033.scaffold00127 142130 1 C A - ScafM SNP 0033.scaffold00127 142509 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 142511 1 . G scaffold3714 ScafM INDEL 0033.scaffold00127 142549 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 142663 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 142672 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 142675 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 142695 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 142720 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 142731 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 142778 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 142802 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 142899 1 G C scaffold3714 Both SNP 0033.scaffold00127 143203 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 143247 2 CT TC scaffold3714 ScafM INDEL 0033.scaffold00127 143267 6 ...... AGTAGC scaffold3714 ScafM INDEL 0033.scaffold00127 143269 14 .............. CTTCAGCTTCAACC scaffold3714 ScafM INDEL 0033.scaffold00127 143271 4 .... TCGA scaffold3714 ScafM INDEL 0033.scaffold00127 143277 30 .............................. GATATTTCTTTTTATTTCTCATCAAACGAA scaffold3714 ScafM INDEL 0033.scaffold00127 143279 8 ........ ACATTTCT scaffold3714 ScafM INDEL 0033.scaffold00127 143280 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 143295 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 143319 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 143325 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 143333 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 143339 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 143564 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 143572 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 143604 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 143610 1 . G scaffold3714 ScafM SNP 0033.scaffold00127 143612 1 G C scaffold3714 ScafM INDEL 0033.scaffold00127 143613 3 ..T ACA scaffold3714 ScafM INDEL 0033.scaffold00127 143619 3 CCC ... scaffold3714 ScafM INDEL 0033.scaffold00127 143629 4 AGTT .... scaffold3714 ScafM SNP 0033.scaffold00127 143649 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 143688 1 T G scaffold3714 ScafM INDEL 0033.scaffold00127 143691 8 GTCGTATA ........ scaffold3714 ScafM INDEL 0033.scaffold00127 143724 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 143731 2 GT AC scaffold3714 ScafM INDEL 0033.scaffold00127 143735 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 143737 4 TAAT ATGC scaffold3714 ScafM INDEL 0033.scaffold00127 143744 2 TT .G scaffold3714 ScafM SNP 0033.scaffold00127 143748 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 143751 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 143753 2 TG CT scaffold3714 ScafM SNP 0033.scaffold00127 143756 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 143758 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 143760 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 143767 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 143838 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 143871 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 143877 2 AT TC scaffold3714 ScafM SNP 0033.scaffold00127 143889 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 148926 1 A C scaffold7895 ScafM SNP 0033.scaffold00127 148930 1 T G scaffold7895 ScafM SNP 0033.scaffold00127 148938 1 C T scaffold7895 ScafM SNP 0033.scaffold00127 148953 1 T C scaffold7895 ScafM INDEL 0033.scaffold00127 148992 1 T . scaffold7895 ScafM SNP 0033.scaffold00127 149005 1 C T scaffold7895 ScafM SNP 0033.scaffold00127 149016 1 G A scaffold7895 ScafM INDEL 0033.scaffold00127 149022 3 AAT ... scaffold7895 ScafM SNP 0033.scaffold00127 149031 1 A G scaffold7895 ScafM SNP 0033.scaffold00127 149052 1 T G scaffold7895 ScafM SNP 0033.scaffold00127 149068 1 A G scaffold7895 ScafM SNP 0033.scaffold00127 149073 2 GA TT scaffold7895 ScafM SNP 0033.scaffold00127 149078 1 A G scaffold7895 ScafM SNP 0033.scaffold00127 149080 1 G A scaffold7895 ScafM SNP 0033.scaffold00127 149099 1 T C scaffold7895 ScafM INDEL 0033.scaffold00127 149101 2 .. TA scaffold7895 ScafM INDEL 0033.scaffold00127 149109 1 G . scaffold7895 ScafM SNP 0033.scaffold00127 149120 1 A G scaffold7895 ScafM SNP 0033.scaffold00127 149128 1 C A scaffold7895 ScafM INDEL 0033.scaffold00127 149133 1 . C scaffold7895 ScafM SNP 0033.scaffold00127 149144 1 C G scaffold7895 ScafM SNP 0033.scaffold00127 149155 1 T C scaffold7895 ScafM SNP 0033.scaffold00127 149160 1 A G scaffold7895 ScafM SNP 0033.scaffold00127 149175 1 A T scaffold7895 ScafM SNP 0033.scaffold00127 149178 1 T A scaffold7895 ScafM SNP 0033.scaffold00127 152515 1 G A scaffold27470 ScafM SNP 0033.scaffold00127 152679 1 A G scaffold27470 ScafM SNP 0033.scaffold00127 152718 1 A G scaffold27470 ScafM SNP 0033.scaffold00127 152720 1 C T scaffold27470 ScafM SNP 0033.scaffold00127 152751 1 T G scaffold27470 ScafM INDEL 0033.scaffold00127 152764 2 TT .. scaffold27470 ScafM SNP 0033.scaffold00127 152772 1 T C scaffold27470 Both SNP 0033.scaffold00127 152867 1 A G scaffold27470 Both SNP 0033.scaffold00127 152908 1 A G scaffold27470 Both INDEL 0033.scaffold00127 152912 1 . G scaffold27470 ScafM SNP 0033.scaffold00127 152958 1 A G scaffold27470 ScafM INDEL 0033.scaffold00127 152991 3 ... GTT scaffold27470 ScafM SNP 0033.scaffold00127 152992 1 A G scaffold27470 ScafM INDEL 0033.scaffold00127 153000 1 . G scaffold27470 ScafM SNP 0033.scaffold00127 153003 3 TTC GAA scaffold27470 ScafM INDEL 0033.scaffold00127 153045 47 ............................................... TATTCACTAGTTATTCAATTCATCAATTGTGTTTATCAATTTTCAAT scaffold27470 Both SNP 0033.scaffold00127 153100 1 C A scaffold27470 Both SNP 0033.scaffold00127 153123 1 A G scaffold27470 Both SNP 0033.scaffold00127 153127 1 C A scaffold27470 ScafM SNP 0033.scaffold00127 153183 1 G A scaffold27470 ScafM SNP 0033.scaffold00127 153200 1 C G scaffold27470 ScafM SNP 0033.scaffold00127 153254 1 A G scaffold27470 ReadM INDEL 0033.scaffold00127 153278 1 . T - ReadM SNP 0033.scaffold00127 153332 1 A G - ReadM SNP 0033.scaffold00127 153346 1 T G - ScafM SNP 0033.scaffold00127 182530 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 182609 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 182653 1 T C scaffold3714 Both SNP 0033.scaffold00127 182882 1 C T scaffold3714 Both SNP 0033.scaffold00127 182900 1 T G scaffold3714 Both SNP 0033.scaffold00127 183389 1 A T scaffold3714 Both SNP 0033.scaffold00127 183417 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 183427 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 183438 1 G A scaffold3714 Both SNP 0033.scaffold00127 183448 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 183566 4 .... GCAT scaffold3714 Both SNP 0033.scaffold00127 183606 1 A G scaffold3714 Both INDEL 0033.scaffold00127 183658 1 . G scaffold3714 Both SNP 0033.scaffold00127 183786 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 183819 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 183824 4 .... GATC scaffold3714 Both SNP 0033.scaffold00127 183910 1 A G scaffold3714 Both SNP 0033.scaffold00127 183916 1 A T scaffold3714 Both INDEL 0033.scaffold00127 184163 1 G . scaffold3714 Both SNP 0033.scaffold00127 184177 1 T C scaffold3714 Both SNP 0033.scaffold00127 184222 1 G T scaffold3714 Both SNP 0033.scaffold00127 184282 1 T A scaffold3714 Both SNP 0033.scaffold00127 184325 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 184352 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 184357 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 184377 1 C T scaffold3714 ReadM SNP 0033.scaffold00127 184472 1 A G - ScafM INDEL 0033.scaffold00127 184566 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 184569 2 CC TT scaffold3714 ScafM SNP 0033.scaffold00127 184585 1 T C scaffold3714 Both SNP 0033.scaffold00127 184618 1 T A scaffold3714 Both SNP 0033.scaffold00127 184722 1 C T scaffold3714 Both SNP 0033.scaffold00127 184786 1 A G scaffold3714 Both SNP 0033.scaffold00127 184825 1 T C scaffold3714 Both SNP 0033.scaffold00127 184852 1 T C scaffold3714 Both SNP 0033.scaffold00127 184887 1 A G scaffold3714 Both SNP 0033.scaffold00127 185003 1 G A scaffold3714 Both SNP 0033.scaffold00127 185103 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 191148 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 191156 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191170 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 191177 2 CA TG scaffold3714 ScafM SNP 0033.scaffold00127 191193 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 191222 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 191227 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 191242 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 191253 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 191254 3 ... AAG scaffold3714 ScafM SNP 0033.scaffold00127 191274 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 191286 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191298 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 191300 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 191310 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 191335 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191337 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 191341 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191351 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191355 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 191362 3 ... AAA scaffold3714 ScafM SNP 0033.scaffold00127 191372 2 CC AT scaffold3714 ScafM SNP 0033.scaffold00127 191392 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191394 1 A T scaffold3714 ScafM INDEL 0033.scaffold00127 191401 4 .... TACT scaffold3714 ScafM SNP 0033.scaffold00127 191409 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 191411 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 191420 2 CA TG scaffold3714 ScafM SNP 0033.scaffold00127 191429 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191431 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191438 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191447 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191481 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 191485 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191488 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191499 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191505 2 CT GA scaffold3714 ScafM SNP 0033.scaffold00127 191508 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 191517 2 CC .. scaffold3714 ScafM SNP 0033.scaffold00127 191529 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191533 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191535 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191544 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 191555 3 ... TGT scaffold3714 ScafM SNP 0033.scaffold00127 191562 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 191564 2 AG GA scaffold3714 ScafM INDEL 0033.scaffold00127 191573 7 TAGCTGA ....... scaffold3714 ScafM INDEL 0033.scaffold00127 191584 2 TG .C scaffold3714 ScafM SNP 0033.scaffold00127 191605 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191607 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191639 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191660 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191683 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 191685 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191688 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191722 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191726 2 CC TG scaffold3714 ScafM SNP 0033.scaffold00127 191736 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 191743 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 191765 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 191769 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 191771 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 191780 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 191831 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191834 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 191836 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 191863 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191865 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 191874 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191882 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 191886 3 AAC TTT scaffold3714 ScafM INDEL 0033.scaffold00127 191895 3 ... ATA scaffold3714 ScafM INDEL 0033.scaffold00127 191896 2 .G AT scaffold3714 ScafM INDEL 0033.scaffold00127 191909 2 CA .. scaffold3714 ScafM SNP 0033.scaffold00127 191933 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 191946 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191949 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 191953 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 191956 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 191980 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 191982 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 192002 2 .. TC scaffold3714 ScafM SNP 0033.scaffold00127 192004 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 192036 3 GCA ... scaffold3714 ScafM INDEL 0033.scaffold00127 192041 3 CCA ... scaffold3714 ScafM INDEL 0033.scaffold00127 192046 5 AGTGT ..... scaffold3714 ScafM SNP 0033.scaffold00127 192067 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 192077 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192122 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 192166 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 192168 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 192178 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 192193 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 192213 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 192243 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192246 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 192255 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 192266 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 192317 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 192346 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 192368 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 192387 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192405 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 192407 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192459 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 192474 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192517 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 192534 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 192542 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 192554 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192573 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 192674 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 192678 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 192729 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 192757 1 A T scaffold3714 ScafM INDEL 0033.scaffold00127 192802 1 . C scaffold3714 ScafM INDEL 0033.scaffold00127 193008 1 C . scaffold3714 ScafM SNP 0033.scaffold00127 193028 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 193045 15 ............... ACTATATTCAAGATT scaffold3714 ScafM INDEL 0033.scaffold00127 193124 1 . C scaffold3714 Both SNP 0033.scaffold00127 193177 1 C T scaffold3714 Both SNP 0033.scaffold00127 193210 1 C A scaffold3714 Both SNP 0033.scaffold00127 193317 1 G A scaffold3714 Both INDEL 0033.scaffold00127 193327 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 193397 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 193400 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 193423 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 193432 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 193449 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 193501 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 193502 2 .C AA scaffold3714 ScafM SNP 0033.scaffold00127 193512 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 193517 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 193520 3 .CC AAG scaffold3714 ScafM INDEL 0033.scaffold00127 193535 3 ... CTA scaffold3714 ScafM INDEL 0033.scaffold00127 193536 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 193540 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 193612 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 193619 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 194242 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 194245 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 194253 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 194261 28 TTGCGAAATTGATTCAATATGGAGGTGA ............................ scaffold3714 ScafM INDEL 0033.scaffold00127 194345 4 .... TATA scaffold3714 ScafM INDEL 0033.scaffold00127 194354 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 194356 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 194362 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 194596 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 194597 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 194622 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 194635 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 194651 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 194664 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 194675 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 194683 2 GA AT scaffold3714 ScafM SNP 0033.scaffold00127 194701 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 194706 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 194858 1 . A scaffold3714 ScafM INDEL 0033.scaffold00127 194918 3 ... CTC scaffold3714 ScafM SNP 0033.scaffold00127 200449 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 200463 10 .......... TTAATGGAAA scaffold3714 ScafM INDEL 0033.scaffold00127 200521 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 200528 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 200537 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 200622 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 200646 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 200650 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 200670 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 200714 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 201114 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 201144 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 201241 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 201258 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 201292 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 201317 6 ...... ATTCTA scaffold3714 ScafM SNP 0033.scaffold00127 201577 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 202302 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 202311 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 202316 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 202331 3 ... TGC scaffold3714 ScafM INDEL 0033.scaffold00127 202337 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 202374 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 202402 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 202436 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 202453 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 202473 1 C G scaffold3714 ScafM INDEL 0033.scaffold00127 202482 3 TTT ... scaffold3714 ReadM SNP 0033.scaffold00127 202600 1 T A - ReadM SNP 0033.scaffold00127 202662 1 A G - ReadM SNP 0033.scaffold00127 202767 1 C T - ReadM SNP 0033.scaffold00127 203089 1 A C - ReadM SNP 0033.scaffold00127 203116 1 G A - ReadM SNP 0033.scaffold00127 203206 1 G A - ReadM SNP 0033.scaffold00127 203210 1 A G - ReadM SNP 0033.scaffold00127 203272 1 C G - ReadM SNP 0033.scaffold00127 203311 1 A G - ReadM SNP 0033.scaffold00127 203366 1 A G - ReadM SNP 0033.scaffold00127 203387 1 T G - ScafM SNP 0033.scaffold00127 203499 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 203518 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 203533 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 203544 2 CC AA scaffold3714 ScafM SNP 0033.scaffold00127 203557 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 203579 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 203601 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 203624 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 203642 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 203659 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 203703 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 203733 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 203742 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 203749 22 ...................... TCAAAGGGTTGGTGGGGAGAAC scaffold3714 ScafM INDEL 0033.scaffold00127 203773 27 ........................... AGCTCGAAGGAGGGAGTTGATGGGGAC scaffold3714 ScafM SNP 0033.scaffold00127 203778 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 203810 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 203841 1 . G scaffold3714 ScafM SNP 0033.scaffold00127 203846 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 203851 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 203866 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 203890 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 203905 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 203914 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 203927 4 GAAC .... scaffold3714 Both SNP 0033.scaffold00127 203966 1 G A scaffold3714 Both SNP 0033.scaffold00127 203999 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 204093 10 TAGATGGTGA .......... scaffold3714 ScafM SNP 0033.scaffold00127 204146 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 204156 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 204282 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 204306 15 GAGGCGTAACGTACT ............... scaffold3714 ScafM INDEL 0033.scaffold00127 204322 10 TTTTTGATGG .......... scaffold3714 ScafM INDEL 0033.scaffold00127 204349 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 204363 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 204377 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 204422 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 204431 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204439 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 204460 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 204471 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204475 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 204488 2 GT AC scaffold3714 ScafM SNP 0033.scaffold00127 204494 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204536 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204550 2 GA CG scaffold3714 Both SNP 0033.scaffold00127 204571 1 T C scaffold3714 Both SNP 0033.scaffold00127 204589 1 A G scaffold3714 Both SNP 0033.scaffold00127 204659 1 A G scaffold3714 Both SNP 0033.scaffold00127 204696 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 204713 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 204715 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 204717 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 204721 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204727 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 204817 1 G A scaffold3714 Both INDEL 0033.scaffold00127 204818 1 . T scaffold3714 ScafM SNP 0033.scaffold00127 204822 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 204876 2 TC CT scaffold3714 ScafM SNP 0033.scaffold00127 204886 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 204898 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 204940 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 204950 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 204956 1 T C scaffold3714 Both SNP 0033.scaffold00127 205001 1 G A scaffold3714 Both SNP 0033.scaffold00127 205013 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 205069 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 205071 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 205081 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 205083 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 205091 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 205097 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 205117 2 AG TT scaffold3714 ScafM SNP 0033.scaffold00127 205135 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 205145 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 205175 1 A T scaffold3714 ReadM SNP 0033.scaffold00127 205211 1 G T - ReadM SNP 0033.scaffold00127 205312 1 C A - ReadM SNP 0033.scaffold00127 205326 1 T A - ReadM SNP 0033.scaffold00127 205397 1 T G - ReadM SNP 0033.scaffold00127 205437 1 C A - ScafM SNP 0033.scaffold00127 230345 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 230372 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 230374 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 230405 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 230415 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 230417 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 230421 4 GTTA .... scaffold3714 ScafM SNP 0033.scaffold00127 230443 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 230459 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 230470 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 230479 2 .. CA scaffold3714 ScafM SNP 0033.scaffold00127 230485 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 230487 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 230516 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 230520 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 230526 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 230548 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 230573 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 230615 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 230619 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 230625 2 TT CC scaffold3714 ScafM SNP 0033.scaffold00127 230630 1 T G scaffold3714 ScafM INDEL 0033.scaffold00127 230633 7 TATTTTA ....... scaffold3714 ScafM SNP 0033.scaffold00127 230643 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 230645 6 CTATTA ....GC scaffold3714 ScafM SNP 0033.scaffold00127 230654 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 230656 1 T C scaffold3714 Both SNP 0033.scaffold00127 230700 1 T A scaffold3714 Both INDEL 0033.scaffold00127 230729 1 . G scaffold3714 Both SNP 0033.scaffold00127 230794 1 T C scaffold3714 Both SNP 0033.scaffold00127 230816 1 T G scaffold3714 ReadM SNP 0033.scaffold00127 230881 1 G A - ReadM INDEL 0033.scaffold00127 230885 1 A . - ScafM SNP 0033.scaffold00127 231706 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 231710 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 231718 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 231721 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 231724 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 231726 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 231739 2 AA GG scaffold3714 ScafM SNP 0033.scaffold00127 231755 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 231763 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 231779 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 231831 8 ........ GTCTTGTA scaffold3714 ScafM SNP 0033.scaffold00127 231851 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 231863 5 .AAAA CTTCT scaffold3714 ScafM SNP 0033.scaffold00127 231872 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 231894 1 C A scaffold3714 ScafM SNP 0033.scaffold00127 231896 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 231921 3 ... ACG scaffold3714 Both SNP 0033.scaffold00127 232003 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 232083 7 TGACTTC ....... scaffold3714 ScafM SNP 0033.scaffold00127 232092 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 232097 1 G C scaffold3714 Both SNP 0033.scaffold00127 232130 1 C A scaffold3714 Both SNP 0033.scaffold00127 232268 1 T C scaffold3714 Both SNP 0033.scaffold00127 232343 1 C T scaffold3714 Both SNP 0033.scaffold00127 232375 1 G A scaffold3714 Both SNP 0033.scaffold00127 232566 1 T A scaffold3714 Both SNP 0033.scaffold00127 232583 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 232587 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 232609 33 AGAGTTAATGTTAAGGACAGAATATATTTGCAA ................................. scaffold3714 ScafM SNP 0033.scaffold00127 232657 1 T A scaffold3714 Both SNP 0033.scaffold00127 232694 1 G T scaffold3714 Both SNP 0033.scaffold00127 232698 1 T G scaffold3714 Both SNP 0033.scaffold00127 232718 1 C G scaffold3714 Both SNP 0033.scaffold00127 232876 1 C A scaffold3714 ReadM SNP 0033.scaffold00127 233087 1 G C - ReadM SNP 0033.scaffold00127 233115 1 C T - ReadM SNP 0033.scaffold00127 233145 1 T C - ReadM SNP 0033.scaffold00127 233150 1 G A - ReadM SNP 0033.scaffold00127 233213 1 A T - Both SNP 0033.scaffold00127 233343 1 A G scaffold3714 Both SNP 0033.scaffold00127 233572 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 233593 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 233630 5 TTGTT ..... scaffold3714 Both SNP 0033.scaffold00127 234052 1 G T scaffold3714 Both SNP 0033.scaffold00127 234461 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 234483 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 234496 1 T C scaffold3714 Both SNP 0033.scaffold00127 234512 1 G A scaffold3714 Both SNP 0033.scaffold00127 234550 1 G A scaffold3714 Both SNP 0033.scaffold00127 234746 1 T G scaffold3714 Both SNP 0033.scaffold00127 234755 1 T C scaffold3714 Both SNP 0033.scaffold00127 234769 1 C T scaffold3714 Both SNP 0033.scaffold00127 234900 1 A T scaffold3714 Both SNP 0033.scaffold00127 234951 1 T C scaffold3714 ReadM SNP 0033.scaffold00127 234967 1 A T - Both SNP 0033.scaffold00127 235043 1 A C scaffold3714 Both SNP 0033.scaffold00127 235091 1 C A scaffold3714 Both SNP 0033.scaffold00127 235136 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 235179 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 235186 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 235197 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 235204 1 A G scaffold3714 Both SNP 0033.scaffold00127 235226 1 C A scaffold3714 Both SNP 0033.scaffold00127 235330 1 A G scaffold3714 Both SNP 0033.scaffold00127 235347 1 A G scaffold3714 Both SNP 0033.scaffold00127 235412 1 C T scaffold3714 Both SNP 0033.scaffold00127 235491 1 G T scaffold3714 Both INDEL 0033.scaffold00127 235495 1 . G scaffold3714 Both SNP 0033.scaffold00127 235508 1 A G scaffold3714 Both SNP 0033.scaffold00127 235582 1 A T scaffold3714 Both SNP 0033.scaffold00127 235618 1 T A scaffold3714 ReadM SNP 0033.scaffold00127 235849 1 T C - ReadM SNP 0033.scaffold00127 235869 1 C T - ReadM SNP 0033.scaffold00127 235886 1 T C - ReadM INDEL 0033.scaffold00127 235900 1 . A - Both INDEL 0033.scaffold00127 236179 2 .. GA scaffold3714 ScafM SNP 0033.scaffold00127 236194 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 236201 2 AC TT scaffold3714 Both SNP 0033.scaffold00127 236266 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 236358 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 237089 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 237452 1 A G scaffold3714 ReadM SNP 0033.scaffold00127 237541 1 A G - Both INDEL 0033.scaffold00127 237824 1 A . scaffold3714 Both SNP 0033.scaffold00127 237873 1 T C scaffold3714 Both SNP 0033.scaffold00127 237927 1 G A scaffold3714 Both SNP 0033.scaffold00127 238078 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 238128 8 AGTCTATT ........ scaffold3714 Both SNP 0033.scaffold00127 238189 1 T C scaffold3714 Both SNP 0033.scaffold00127 238193 1 A G scaffold3714 ReadM SNP 0033.scaffold00127 238255 1 A G - ReadM SNP 0033.scaffold00127 238266 1 G A - ReadM SNP 0033.scaffold00127 238282 1 T C - ReadM SNP 0033.scaffold00127 238401 1 T C - Both SNP 0033.scaffold00127 238606 1 G A scaffold3714 Both SNP 0033.scaffold00127 238730 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 238779 18 TTAATGAGAAGAGAATTT .................. scaffold3714 ScafM INDEL 0033.scaffold00127 238798 7 TTTATCT ....... scaffold3714 ReadM SNP 0033.scaffold00127 238852 1 C T - ReadM SNP 0033.scaffold00127 238909 1 A G - ReadM SNP 0033.scaffold00127 238936 1 C T - ReadM SNP 0033.scaffold00127 239041 1 A G - ReadM SNP 0033.scaffold00127 239066 1 A G - ReadM SNP 0033.scaffold00127 239125 1 A G - ReadM INDEL 0033.scaffold00127 239135 1 T . - ReadM SNP 0033.scaffold00127 239407 1 T C - ReadM SNP 0033.scaffold00127 239437 1 C T - ReadM SNP 0033.scaffold00127 239459 1 C T - ReadM SNP 0033.scaffold00127 239562 1 G A - ReadM SNP 0033.scaffold00127 239570 1 G A - ReadM SNP 0033.scaffold00127 239588 1 C T - ReadM SNP 0033.scaffold00127 239637 1 G A - ReadM SNP 0033.scaffold00127 239661 1 C T - ReadM SNP 0033.scaffold00127 239701 1 T C - ReadM SNP 0033.scaffold00127 239724 1 T C - ReadM SNP 0033.scaffold00127 239735 1 G C - ReadM SNP 0033.scaffold00127 239868 1 C T - ReadM SNP 0033.scaffold00127 239958 1 T C - ReadM SNP 0033.scaffold00127 239960 1 A G - ReadM SNP 0033.scaffold00127 240079 1 T C - ReadM INDEL 0033.scaffold00127 240143 1 A . - ReadM SNP 0033.scaffold00127 240196 1 C A - ReadM SNP 0033.scaffold00127 240202 1 T A - ReadM SNP 0033.scaffold00127 240222 1 C T - Both SNP 0033.scaffold00127 240287 1 C A scaffold3714 ReadM SNP 0033.scaffold00127 240586 1 T C - ReadM SNP 0033.scaffold00127 240706 1 T C - ReadM INDEL 0033.scaffold00127 240739 1 C . - ReadM SNP 0033.scaffold00127 240883 1 G A - Both INDEL 0033.scaffold00127 242073 3 ... TCA scaffold3714 Both SNP 0033.scaffold00127 242138 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 242253 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 242275 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 242284 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 242293 2 CC TT scaffold3714 Both INDEL 0033.scaffold00127 242309 1 T . scaffold3714 ReadM SNP 0033.scaffold00127 242415 1 T C - ReadM INDEL 0033.scaffold00127 242477 2 .. TT - ScafM SNP 0033.scaffold00127 242554 1 A T scaffold3714 Both SNP 0033.scaffold00127 242623 1 C T scaffold3714 Both SNP 0033.scaffold00127 242639 1 G A scaffold3714 ReadM SNP 0033.scaffold00127 242825 1 C A - ReadM SNP 0033.scaffold00127 242835 1 T C - ReadM SNP 0033.scaffold00127 242933 1 T G - ReadM SNP 0033.scaffold00127 243200 1 A G - ReadM SNP 0033.scaffold00127 243342 1 C T - ReadM SNP 0033.scaffold00127 243352 1 C T - ReadM SNP 0033.scaffold00127 243356 1 T C - ScafM SNP 0033.scaffold00127 243485 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 243489 2 TT AA scaffold3714 ScafM SNP 0033.scaffold00127 243703 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 243713 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 243726 1 T A scaffold3714 ScafM INDEL 0033.scaffold00127 243735 1 A . scaffold3714 ScafM INDEL 0033.scaffold00127 243747 5 ..... GTATA scaffold3714 ScafM INDEL 0033.scaffold00127 243767 3 TGA ... scaffold3714 ScafM INDEL 0033.scaffold00127 243774 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 243813 1 C T scaffold3714 Both SNP 0033.scaffold00127 243882 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 244071 3 ... CCA scaffold3714 ScafM INDEL 0033.scaffold00127 244092 5 ..... TAGTA scaffold3714 ScafM SNP 0033.scaffold00127 244138 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 244149 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 244311 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 244323 11 AAAAAACAAGC ........... scaffold3714 Both SNP 0033.scaffold00127 244373 1 C T scaffold3714 ReadM SNP 0033.scaffold00127 244488 1 T A - ReadM SNP 0033.scaffold00127 244501 1 G A - ReadM SNP 0033.scaffold00127 244584 1 C T - Both SNP 0033.scaffold00127 245070 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 245112 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 245118 1 A T scaffold3714 ScafM INDEL 0033.scaffold00127 245121 3 ATA ... scaffold3714 ScafM SNP 0033.scaffold00127 245129 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 245138 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 245167 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 245185 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 245195 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 245214 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 245246 7 ....... GTCTAGA scaffold3714 ScafM INDEL 0033.scaffold00127 245270 1 . T scaffold3714 ScafM INDEL 0033.scaffold00127 245287 3 ... CAT scaffold3714 ScafM INDEL 0033.scaffold00127 245301 2 AG .. scaffold3714 Both INDEL 0033.scaffold00127 245344 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 245435 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 245456 6 ...... CTTTTT scaffold3714 ScafM INDEL 0033.scaffold00127 245457 3 ... GAC scaffold3714 ScafM INDEL 0033.scaffold00127 245458 7 ....... TGTGGTC scaffold3714 ScafM INDEL 0033.scaffold00127 245461 11 ........... TTGATATTTCT scaffold3714 ScafM INDEL 0033.scaffold00127 245462 4 .... CCTT scaffold3714 ScafM SNP 0033.scaffold00127 245500 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 245508 5 ....A GCCCG scaffold3714 ScafM SNP 0033.scaffold00127 245534 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 245562 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 245573 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 245627 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 245630 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 245674 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 245691 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 245709 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 245715 2 GA AG scaffold3714 ScafM SNP 0033.scaffold00127 245749 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 245764 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 245776 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 245827 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 245838 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 245841 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 245854 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 245856 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 245858 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 245866 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 245873 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 245880 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 245896 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 246022 7 ....... TTATATA scaffold3714 ScafM SNP 0033.scaffold00127 246040 1 A G scaffold3714 ReadM SNP 0033.scaffold00127 246119 1 T C - ReadM SNP 0033.scaffold00127 246131 1 G T - ReadM SNP 0033.scaffold00127 246857 1 C T - ReadM SNP 0033.scaffold00127 246862 1 T A - ReadM SNP 0033.scaffold00127 246956 1 C A - ReadM SNP 0033.scaffold00127 247138 1 A T - ReadM SNP 0033.scaffold00127 247150 1 G C - ReadM SNP 0033.scaffold00127 247164 1 A T - ReadM SNP 0033.scaffold00127 247441 1 C T - ReadM SNP 0033.scaffold00127 247494 1 C A - ScafM SNP 0033.scaffold00127 247534 1 G A scaffold3714 Both SNP 0033.scaffold00127 247675 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 247721 1 A C scaffold3714 ScafM INDEL 0033.scaffold00127 247732 2 .G CA scaffold3714 Both SNP 0033.scaffold00127 247832 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 247852 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 247854 1 T G scaffold3714 Both SNP 0033.scaffold00127 247872 1 C A scaffold3714 Both SNP 0033.scaffold00127 247884 1 T G scaffold3714 Both SNP 0033.scaffold00127 247967 1 A G scaffold3714 Both SNP 0033.scaffold00127 247986 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 248014 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 248023 2 GA CC scaffold3714 ScafM SNP 0033.scaffold00127 248037 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 248042 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 248067 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 248090 5 ..... CTCTA scaffold3714 ScafM INDEL 0033.scaffold00127 248091 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 248099 2 GA AG scaffold3714 ScafM SNP 0033.scaffold00127 248120 2 TA CG scaffold3714 ScafM SNP 0033.scaffold00127 248152 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 248155 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 248180 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 248182 2 TG AA scaffold3714 ScafM INDEL 0033.scaffold00127 248185 2 GA .. scaffold3714 ScafM INDEL 0033.scaffold00127 248191 1 . G scaffold3714 ScafM SNP 0033.scaffold00127 248193 3 CGT AAA scaffold3714 ScafM INDEL 0033.scaffold00127 248204 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 248222 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 248240 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 248244 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 248256 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 248305 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 248341 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 248353 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 248359 2 TT GA scaffold3714 ScafM SNP 0033.scaffold00127 248365 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 248412 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 248425 2 TA .. scaffold3714 ScafM SNP 0033.scaffold00127 248433 1 A G scaffold3714 ScafM INDEL 0033.scaffold00127 248440 1 . G scaffold3714 ScafM INDEL 0033.scaffold00127 248447 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 248468 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 248475 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 248485 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 249100 1 G A scaffold8239 ScafM SNP 0033.scaffold00127 249106 1 A C scaffold8239 ScafM SNP 0033.scaffold00127 249115 1 G A scaffold8239 ScafM SNP 0033.scaffold00127 249144 1 G A scaffold8239 ScafM SNP 0033.scaffold00127 249165 1 G A scaffold8239 ScafM SNP 0033.scaffold00127 249227 1 T C scaffold8239 ScafM SNP 0033.scaffold00127 249262 1 T G scaffold8239 ScafM SNP 0033.scaffold00127 250001 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 250011 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 250052 1 A C scaffold3714 ScafM SNP 0033.scaffold00127 250073 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 250078 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 250101 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 250496 1 . C scaffold3714 ScafM SNP 0033.scaffold00127 250524 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 250530 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 250540 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 250562 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 250571 1 A . scaffold3714 ScafM INDEL 0033.scaffold00127 250605 1 T . scaffold3714 ScafM SNP 0033.scaffold00127 250633 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 252300 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 252304 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 252315 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 252332 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 252335 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 252338 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 252342 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 252346 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 252360 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 252366 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 252377 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 252380 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 252385 1 . A scaffold3714 ScafM SNP 0033.scaffold00127 252389 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 252428 2 CA .T scaffold3714 ScafM SNP 0033.scaffold00127 252432 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 252435 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 252452 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 252471 8 ........ TGATTAGA scaffold3714 ScafM SNP 0033.scaffold00127 252478 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 252485 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 252487 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 252500 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 252510 1 C A scaffold3714 ScafM INDEL 0033.scaffold00127 252516 3 AAA ... scaffold3714 ScafM INDEL 0033.scaffold00127 252523 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 252527 1 A T scaffold3714 ScafM SNP 0033.scaffold00127 252550 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 252828 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 252844 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 252851 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 252857 1 T C scaffold3714 ScafM INDEL 0033.scaffold00127 252901 5 CAGAA ..... scaffold3714 ScafM SNP 0033.scaffold00127 252907 2 CT TG scaffold3714 ScafM SNP 0033.scaffold00127 252930 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 252973 1 A T scaffold3714 ScafM INDEL 0033.scaffold00127 252976 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 252985 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 253001 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 253008 1 T A scaffold3714 ScafM SNP 0033.scaffold00127 253010 1 A G scaffold3714 ReadM INDEL 0033.scaffold00127 253200 1 T . - Both SNP 0033.scaffold00127 253232 1 C T scaffold3714 Both SNP 0033.scaffold00127 253366 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 253418 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 253480 12 ............ TTGAATAGATGA scaffold3714 ScafM INDEL 0033.scaffold00127 253504 1 G . scaffold3714 ScafM SNP 0033.scaffold00127 253506 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 253508 1 G . scaffold3714 ScafM INDEL 0033.scaffold00127 253511 1 T . scaffold3714 ScafM INDEL 0033.scaffold00127 253515 1 . A scaffold3714 Both SNP 0033.scaffold00127 253612 1 T G scaffold3714 ScafM SNP 0033.scaffold00127 253667 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 253813 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 253888 1 G T scaffold3714 ScafM SNP 0033.scaffold00127 253953 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 253957 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 255504 1 G A scaffold1694 ScafM SNP 0033.scaffold00127 255508 1 C T scaffold1694 ScafM SNP 0033.scaffold00127 255552 2 CC TA scaffold1694 ScafM SNP 0033.scaffold00127 255559 1 G A scaffold1694 ScafM SNP 0033.scaffold00127 255592 1 C A scaffold1694 ScafM INDEL 0033.scaffold00127 255597 2 TC .. scaffold1694 ScafM SNP 0033.scaffold00127 255618 1 A G scaffold1694 ScafM SNP 0033.scaffold00127 260619 1 T C scaffold3714 ScafM SNP 0033.scaffold00127 260665 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261059 1 G A scaffold3714 ScafM INDEL 0033.scaffold00127 261083 6 ATGAAT ...... scaffold3714 ScafM SNP 0033.scaffold00127 261099 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261106 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 261113 1 G C scaffold3714 ScafM SNP 0033.scaffold00127 261117 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261122 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261206 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261213 1 C G scaffold3714 ScafM SNP 0033.scaffold00127 261221 1 A G scaffold3714 ScafM SNP 0033.scaffold00127 261249 1 C T scaffold3714 ScafM SNP 0033.scaffold00127 261306 1 G T scaffold3714 ScafM INDEL 0033.scaffold00127 261321 1 A . scaffold3714 ScafM SNP 0033.scaffold00127 261356 1 G A scaffold3714 ReadM SNP 0033.scaffold00127 269372 1 G T - ReadM SNP 0033.scaffold00127 269436 1 G T - ReadM SNP 0033.scaffold00127 269476 1 G T - ReadM SNP 0033.scaffold00127 269482 1 G A - ReadM SNP 0033.scaffold00127 269692 1 G A - ReadM SNP 0033.scaffold00127 269797 1 A C - ReadM SNP 0033.scaffold00127 269806 1 T G - ScafM INDEL 0033.scaffold00127 270276 13 ............. GTTTTTTGGGGGG scaffold3714 ScafM INDEL 0033.scaffold00127 270281 12 ...........A TGTGGTTTGGTT scaffold3714 ScafM SNP 0033.scaffold00127 270370 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 271564 1 G A scaffold3714 ScafM SNP 0033.scaffold00127 271596 1 C T scaffold3714 ScafM INDEL 0033.scaffold00127 271782 2 .. TT scaffold3714 ReadM SNP 0033.scaffold00127 271871 1 C T - ReadM SNP 0033.scaffold00127 271888 1 T C - ReadM SNP 0033.scaffold00127 272373 1 T C - ReadM SNP 0033.scaffold00127 272404 1 G A - ScafM SNP 0033.scaffold00127 273140 1 C A scaffold22078 ScafM INDEL 0033.scaffold00127 273191 2 .. AT scaffold22078 ScafM SNP 0033.scaffold00127 273196 1 T C scaffold22078 ScafM INDEL 0033.scaffold00127 273244 2 AT .. scaffold22078 ScafM SNP 0033.scaffold00127 273251 1 A G scaffold22078 ScafM INDEL 0033.scaffold00127 273280 1 A . scaffold22078 ScafM SNP 0033.scaffold00127 273293 1 C T scaffold22078 ReadM SNP 0033.scaffold00127 273501 1 A G - ReadM SNP 0033.scaffold00127 273507 1 A G - ReadM SNP 0033.scaffold00127 273530 1 C T - ReadM SNP 0033.scaffold00127 273626 1 C T - ReadM SNP 0033.scaffold00127 273803 1 T C - ReadM SNP 0033.scaffold00127 273848 1 A G - ReadM SNP 0033.scaffold00127 273880 1 A G - ReadM SNP 0033.scaffold00127 273896 1 C T - ReadM SNP 0033.scaffold00127 274009 1 C T - ScafM SNP 0033.scaffold00127 274531 1 G A scaffold22078 ScafM SNP 0033.scaffold00127 276671 1 T C scaffold22078 ScafM SNP 0033.scaffold00127 276701 1 G T scaffold22078 ScafM INDEL 0033.scaffold00127 276743 1 . T scaffold22078 ScafM SNP 0033.scaffold00127 276797 1 T A scaffold22078 ScafM SNP 0033.scaffold00127 276863 1 A T scaffold22078 Both SNP 0033.scaffold00127 276924 1 G A scaffold22078 ScafM INDEL 0033.scaffold00127 277039 6 ...... TTAGGG scaffold22078 ScafM INDEL 0033.scaffold00127 277434 1 . G scaffold22078 Both INDEL 0033.scaffold00127 277540 1 T . scaffold22078 Both SNP 0033.scaffold00127 277588 1 A G scaffold22078 Both SNP 0033.scaffold00127 277600 1 C T scaffold22078 ScafM SNP 0033.scaffold00127 277663 1 C A scaffold22078 ScafM INDEL 0033.scaffold00127 277705 1 . A scaffold33749 ScafM SNP 0033.scaffold00127 277720 1 T A scaffold33749 ScafM SNP 0033.scaffold00127 277722 1 G A scaffold33749 ScafM SNP 0033.scaffold00127 277739 1 A T scaffold33749 ScafM SNP 0033.scaffold00127 277792 1 G A scaffold33749 ScafM SNP 0033.scaffold00127 277800 1 T C scaffold33749 ScafM SNP 0033.scaffold00127 277809 1 A C scaffold33749 ScafM SNP 0033.scaffold00127 277823 1 A T scaffold33749 ScafM SNP 0033.scaffold00127 277855 1 T A scaffold33749 ReadM SNP 0033.scaffold00127 277879 1 A T - ScafM SNP 0033.scaffold00127 278331 1 A G scaffold22078 ScafM SNP 0033.scaffold00127 278371 1 A G scaffold22078 ScafM INDEL 0033.scaffold00127 278499 5 TAATT ..... scaffold22078 ScafM SNP 0033.scaffold00127 278547 1 T G scaffold22078 ScafM SNP 0033.scaffold00127 279869 1 G C scaffold22078 ScafM SNP 0033.scaffold00127 279882 1 C T scaffold22078 ScafM INDEL 0033.scaffold00127 279901 1 . G scaffold22078 ScafM SNP 0033.scaffold00127 279923 2 TC AA scaffold22078 ScafM INDEL 0033.scaffold00127 280034 16 CTAAAGACAAATTATG ................ scaffold22078 ScafM INDEL 0033.scaffold00127 280052 3 TGA ... scaffold22078 ScafM INDEL 0033.scaffold00127 280056 1 G . scaffold22078 ScafM INDEL 0033.scaffold00127 280065 1 . A scaffold22078 ScafM INDEL 0033.scaffold00127 280145 2 AC .. scaffold22078 ScafM INDEL 0033.scaffold00127 280149 2 GC .. scaffold22078 Both SNP 0033.scaffold00127 280378 1 G A scaffold22078 Both INDEL 0033.scaffold00127 280431 1 . T scaffold22078 Both SNP 0033.scaffold00127 280448 1 A G scaffold22078 Both SNP 0033.scaffold00127 280601 1 C G scaffold22078 Both SNP 0033.scaffold00127 280623 1 A C scaffold22078 Both SNP 0033.scaffold00127 280679 1 T C scaffold22078 Both SNP 0033.scaffold00127 280685 1 T C scaffold22078 ScafM SNP 0033.scaffold00127 280817 1 A G scaffold22078 ScafM SNP 0033.scaffold00127 280833 1 G A scaffold22078 ScafM SNP 0033.scaffold00127 280837 1 G A scaffold22078 ScafM INDEL 0033.scaffold00127 280853 1 . T scaffold22078 ScafM SNP 0033.scaffold00127 280858 1 C T scaffold22078 ScafM SNP 0033.scaffold00127 280862 1 T C scaffold22078 ScafM INDEL 0033.scaffold00127 280886 5 ..... GATAT scaffold22078 ScafM INDEL 0033.scaffold00127 280896 4 CTCA ...G scaffold22078 ScafM INDEL 0033.scaffold00127 280921 10 .......... ATCAGCTGTT scaffold22078 ScafM SNP 0033.scaffold00127 280934 1 G A scaffold22078 ScafM SNP 0033.scaffold00127 280938 1 T C scaffold22078 ScafM INDEL 0033.scaffold00127 280957 2 .. GA scaffold22078 ScafM SNP 0033.scaffold00127 280978 2 TT CA scaffold22078 ReadM SNP 0033.scaffold00127 281415 1 C A - ReadM SNP 0033.scaffold00127 281433 1 T A - ReadM SNP 0033.scaffold00127 281506 1 A G - ReadM INDEL 0033.scaffold00127 281543 1 . G - ReadM SNP 0033.scaffold00127 281597 1 G A - ReadM SNP 0033.scaffold00127 281622 1 A G - ReadM SNP 0033.scaffold00127 281673 1 C T - ReadM SNP 0033.scaffold00127 281681 1 G A - ReadM SNP 0033.scaffold00127 281718 1 T C - ReadM SNP 0033.scaffold00127 281872 1 A G - Both SNP 0033.scaffold00127 281912 1 G A scaffold22078 Both SNP 0033.scaffold00127 282021 1 A C scaffold22078 Both SNP 0033.scaffold00127 282065 1 T C scaffold22078 ScafM SNP 0033.scaffold00127 282094 1 C T scaffold22078 ScafM INDEL 0033.scaffold00127 282095 4 .... ATGC scaffold22078 Both SNP 0033.scaffold00127 282148 1 A G scaffold22078 ScafM SNP 0033.scaffold00127 282243 1 A C scaffold22078 ScafM SNP 0033.scaffold00127 282245 1 C T scaffold22078 ScafM SNP 0033.scaffold00127 282286 2 GG AC scaffold22078 Both SNP 0033.scaffold00127 282295 1 G A scaffold22078 ScafM INDEL 0033.scaffold00127 282387 4 GAAG .... scaffold22078 Both SNP 0033.scaffold00127 282406 1 T C scaffold22078 Both SNP 0033.scaffold00127 282460 1 C T scaffold22078 Both SNP 0033.scaffold00127 282557 1 G A scaffold22078 Both SNP 0033.scaffold00127 282570 1 G A scaffold22078 Both SNP 0033.scaffold00127 282701 1 C A scaffold22078 Both SNP 0033.scaffold00127 282712 1 C A scaffold22078 ScafM INDEL 0033.scaffold00127 282723 1 . A scaffold22078 ScafM SNP 0033.scaffold00127 282736 1 G C scaffold22078 ScafM INDEL 0033.scaffold00127 282777 3 ... TAA scaffold22078 Both SNP 0033.scaffold00127 282836 1 C G scaffold22078 ReadM SNP 0033.scaffold00127 282933 1 A C - ReadM SNP 0033.scaffold00127 282990 1 A G - ReadM SNP 0033.scaffold00127 282999 1 G A - ScafM INDEL 0033.scaffold00127 283228 1 . A scaffold22078 Both SNP 0033.scaffold00127 283345 1 A G scaffold22078 ReadM SNP 0033.scaffold00127 284332 1 G A - ReadM SNP 0033.scaffold00127 284391 1 G A - ReadM SNP 0033.scaffold00127 284638 1 A T - Both SNP 0033.scaffold00127 284770 1 C T scaffold40207 Both INDEL 0033.scaffold00127 284916 2 GT .. scaffold40207 ScafM SNP 0033.scaffold00127 284937 1 C A scaffold40207 Both INDEL 0033.scaffold00127 284946 1 . A scaffold40207 ScafM INDEL 0033.scaffold00127 285135 2 .. TT scaffold40207 ScafM SNP 0033.scaffold00127 285141 1 C T scaffold40207 ScafM SNP 0033.scaffold00127 285162 1 G C scaffold40207 Both SNP 0033.scaffold00127 285255 1 T C scaffold40207 ScafM SNP 0033.scaffold00127 285321 1 A G scaffold40207 ScafM SNP 0033.scaffold00127 285351 1 T C scaffold40207 ScafM SNP 0033.scaffold00127 285357 1 A G scaffold40207 ScafM INDEL 0033.scaffold00127 285361 4 .... TTTA scaffold40207 Both SNP 0033.scaffold00127 285476 1 A G scaffold40207 Both SNP 0033.scaffold00127 285481 1 A C scaffold40207 ScafM SNP 0033.scaffold00127 285533 1 C T scaffold40207 ScafM INDEL 0033.scaffold00127 285540 1 A . scaffold40207 ScafM SNP 0033.scaffold00127 285545 2 TC AT scaffold40207 Both SNP 0033.scaffold00127 285613 1 G A scaffold40207 Both INDEL 0033.scaffold00127 285639 1 T . scaffold40207 ScafM INDEL 0033.scaffold00127 285676 4 ATAA .... scaffold40207 ScafM SNP 0033.scaffold00127 285682 1 A G scaffold40207 Both SNP 0033.scaffold00127 285991 1 T C scaffold40207 Both SNP 0033.scaffold00127 285999 1 G C scaffold40207 ScafM INDEL 0033.scaffold00127 286096 3 ... ATC scaffold40207 ScafM INDEL 0033.scaffold00127 286118 2 .. AC scaffold40207 ScafM SNP 0033.scaffold00127 286139 1 A G scaffold40207 ScafM INDEL 0033.scaffold00127 286141 1 T . scaffold40207 ScafM INDEL 0033.scaffold00127 286184 1 . T scaffold40207 ReadM SNP 0033.scaffold00127 286236 1 C T - ScafM INDEL 0033.scaffold00127 286854 1 T . scaffold14276 ScafM SNP 0033.scaffold00127 287051 1 G A scaffold14276 ReadM SNP 0033.scaffold00127 287141 1 T C - ScafM SNP 0033.scaffold00127 287142 1 C T scaffold14276 ScafM SNP 0033.scaffold00127 287359 1 T C scaffold14276 ReadM SNP 0033.scaffold00127 288116 1 C T - ReadM SNP 0033.scaffold00127 288627 1 C A - ReadM SNP 0033.scaffold00127 288743 1 A G - Both SNP 0033.scaffold00127 288805 1 A G scaffold11319 Both SNP 0033.scaffold00127 288840 1 G T scaffold11319 ReadM SNP 0033.scaffold00127 289145 1 C A - ReadM SNP 0033.scaffold00127 290084 1 G A - ScafM SNP 0033.scaffold00127 292391 1 A T scaffold40207 ScafM SNP 0033.scaffold00127 292457 1 C G scaffold40207 ScafM SNP 0033.scaffold00127 292815 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 292881 1 T . scaffold15418 ScafM SNP 0033.scaffold00127 292917 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 292927 2 TA AT scaffold15418 ScafM SNP 0033.scaffold00127 292933 1 T A scaffold15418 ScafM INDEL 0033.scaffold00127 292975 3 TAA ... scaffold15418 Both SNP 0033.scaffold00127 293530 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 293562 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 293584 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 293588 1 C A scaffold15418 ScafM INDEL 0033.scaffold00127 293638 1 A . scaffold15418 ReadM SNP 0033.scaffold00127 293769 1 C T - ReadM SNP 0033.scaffold00127 293783 1 A G - ScafM SNP 0033.scaffold00127 294088 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294122 2 TT CC scaffold15418 ScafM SNP 0033.scaffold00127 294177 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294197 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294202 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294215 1 A C scaffold15418 ScafM INDEL 0033.scaffold00127 294221 1 . A scaffold15418 ScafM INDEL 0033.scaffold00127 294232 1 T . scaffold15418 ScafM SNP 0033.scaffold00127 294243 1 A T scaffold15418 ScafM SNP 0033.scaffold00127 294287 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294303 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294309 1 C G scaffold15418 ScafM INDEL 0033.scaffold00127 294311 3 TTC ... scaffold15418 ScafM SNP 0033.scaffold00127 294319 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294342 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 294363 2 CG AA scaffold15418 ScafM SNP 0033.scaffold00127 294370 1 A T scaffold15418 ScafM INDEL 0033.scaffold00127 294375 1 . A scaffold15418 ScafM INDEL 0033.scaffold00127 294406 1 G . scaffold15418 ScafM SNP 0033.scaffold00127 294416 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294420 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294438 1 C G scaffold15418 ScafM SNP 0033.scaffold00127 294469 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294486 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294490 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294506 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 294509 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294527 2 CA AC scaffold15418 ScafM SNP 0033.scaffold00127 294537 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294584 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294620 1 G A scaffold15418 ScafM INDEL 0033.scaffold00127 294646 3 TGC ... scaffold15418 ScafM INDEL 0033.scaffold00127 294676 1 . G scaffold15418 ScafM INDEL 0033.scaffold00127 294678 2 .. TT scaffold15418 ScafM INDEL 0033.scaffold00127 294679 1 . G scaffold15418 ScafM INDEL 0033.scaffold00127 294683 3 ... TAG scaffold15418 ScafM SNP 0033.scaffold00127 294737 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294739 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294749 2 TT AC scaffold15418 ScafM INDEL 0033.scaffold00127 294754 1 . T scaffold15418 ScafM SNP 0033.scaffold00127 294784 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294803 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294832 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 294837 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 294839 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 294876 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 294895 1 C T scaffold15418 ScafM INDEL 0033.scaffold00127 294914 5 ..... TCGGG scaffold15418 ScafM SNP 0033.scaffold00127 294917 2 CC AA scaffold15418 ScafM SNP 0033.scaffold00127 294927 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 294941 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 294945 1 A T scaffold15418 ScafM INDEL 0033.scaffold00127 294979 1 . C scaffold15418 ScafM INDEL 0033.scaffold00127 294980 2 .. CA scaffold15418 ScafM SNP 0033.scaffold00127 295012 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 295047 1 C G scaffold15418 ScafM INDEL 0033.scaffold00127 295076 7 ....... CCTCTCT scaffold15418 ReadM SNP 0033.scaffold00127 295494 1 T C - ReadM SNP 0033.scaffold00127 295504 1 A G - ReadM INDEL 0033.scaffold00127 295535 1 C . - ReadM SNP 0033.scaffold00127 295997 1 C A - ScafM SNP 0033.scaffold00127 298513 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 298561 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 298585 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 298592 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 298612 3 ACC GAT scaffold15418 ScafM INDEL 0033.scaffold00127 298642 9 ATACGAGAC ......... scaffold15418 ScafM SNP 0033.scaffold00127 298656 1 C G scaffold15418 ScafM SNP 0033.scaffold00127 298659 1 T A scaffold15418 ScafM INDEL 0033.scaffold00127 298663 1 A . scaffold15418 ScafM INDEL 0033.scaffold00127 298665 1 G . scaffold15418 ScafM INDEL 0033.scaffold00127 298669 4 GGGC ...T scaffold15418 ScafM SNP 0033.scaffold00127 298675 1 C A scaffold15418 ScafM SNP 0033.scaffold00127 298677 1 A C scaffold15418 ScafM INDEL 0033.scaffold00127 298679 1 T . scaffold15418 ScafM INDEL 0033.scaffold00127 298681 2 AA .C scaffold15418 ScafM INDEL 0033.scaffold00127 298689 6 TAAATT ...... scaffold15418 ScafM INDEL 0033.scaffold00127 298697 3 TCT ... scaffold15418 ScafM INDEL 0033.scaffold00127 298702 1 C . scaffold15418 ScafM INDEL 0033.scaffold00127 298704 1 T . scaffold15418 ReadM SNP 0033.scaffold00127 298812 1 A G - ReadM SNP 0033.scaffold00127 298821 1 G T - ReadM INDEL 0033.scaffold00127 298830 1 A . - ReadM SNP 0033.scaffold00127 300226 1 C T - ReadM SNP 0033.scaffold00127 300282 1 T G - ReadM SNP 0033.scaffold00127 300497 1 G T - ReadM SNP 0033.scaffold00127 300530 1 A G - ScafM SNP 0033.scaffold00127 301763 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 301781 1 A G scaffold15418 ScafM INDEL 0033.scaffold00127 302063 10 .......... GTTTTGTGTT scaffold15418 ScafM INDEL 0033.scaffold00127 302067 1 A . scaffold15418 ScafM INDEL 0033.scaffold00127 302995 3 ... CCC scaffold15418 ScafM SNP 0033.scaffold00127 302996 1 A T scaffold15418 ScafM INDEL 0033.scaffold00127 303012 1 . G scaffold15418 Both SNP 0033.scaffold00127 303062 1 T C scaffold15418 Both SNP 0033.scaffold00127 303093 1 A C scaffold15418 Both SNP 0033.scaffold00127 303185 1 G C scaffold15418 Both SNP 0033.scaffold00127 303205 1 A G scaffold15418 Both SNP 0033.scaffold00127 303211 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 303312 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 303350 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 303363 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 303478 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 303518 1 C G scaffold15418 ScafM SNP 0033.scaffold00127 303526 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 303542 1 A C scaffold15418 ScafM SNP 0033.scaffold00127 303545 1 C A scaffold15418 ScafM INDEL 0033.scaffold00127 303657 2 AA .. scaffold15418 ScafM SNP 0033.scaffold00127 303660 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 303761 1 A T scaffold15418 ReadM SNP 0033.scaffold00127 305105 1 C T - Both SNP 0033.scaffold00127 305199 1 C A scaffold15418 ReadM SNP 0033.scaffold00127 305299 1 G A - ReadM SNP 0033.scaffold00127 305503 1 C T - ReadM SNP 0033.scaffold00127 305525 1 G C - ReadM SNP 0033.scaffold00127 305595 1 C A - ReadM SNP 0033.scaffold00127 305601 1 C A - ReadM SNP 0033.scaffold00127 305814 1 T A - ScafM SNP 0033.scaffold00127 305981 1 G A scaffold15418 Both SNP 0033.scaffold00127 306152 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 306181 1 G A scaffold15418 Both SNP 0033.scaffold00127 306371 1 T C scaffold15418 Both SNP 0033.scaffold00127 306424 1 A T scaffold15418 Both SNP 0033.scaffold00127 306445 1 A G scaffold15418 Both SNP 0033.scaffold00127 306454 1 G A scaffold15418 Both SNP 0033.scaffold00127 306502 1 T G scaffold15418 Both SNP 0033.scaffold00127 306509 1 T C scaffold15418 Both SNP 0033.scaffold00127 306531 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 306582 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 306602 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 306613 1 C A scaffold15418 ScafM SNP 0033.scaffold00127 306626 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 306646 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 306661 1 G T scaffold15418 ScafM SNP 0033.scaffold00127 306685 1 G C scaffold15418 ScafM INDEL 0033.scaffold00127 306686 1 . G scaffold15418 ScafM SNP 0033.scaffold00127 306693 1 T A scaffold15418 ReadM SNP 0033.scaffold00127 306985 1 T A - ReadM SNP 0033.scaffold00127 307022 1 T A - ScafM SNP 0033.scaffold00127 307109 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 307122 1 T C scaffold15418 Both SNP 0033.scaffold00127 307143 1 T C scaffold15418 Both SNP 0033.scaffold00127 307206 1 C T scaffold15418 Both SNP 0033.scaffold00127 307226 1 G C scaffold15418 ScafM SNP 0033.scaffold00127 307253 2 TA GT scaffold15418 ScafM INDEL 0033.scaffold00127 307258 1 A . scaffold15418 ScafM SNP 0033.scaffold00127 307269 2 CC TT scaffold15418 Both SNP 0033.scaffold00127 307332 1 A C scaffold15418 Both SNP 0033.scaffold00127 307385 1 T G scaffold15418 Both SNP 0033.scaffold00127 307389 1 G A scaffold15418 Both SNP 0033.scaffold00127 307413 1 C T scaffold15418 Both SNP 0033.scaffold00127 307461 1 T C scaffold15418 ReadM SNP 0033.scaffold00127 307586 1 A G - ReadM SNP 0033.scaffold00127 307596 1 C T - ReadM SNP 0033.scaffold00127 307621 1 T C - ReadM SNP 0033.scaffold00127 307784 1 T C - ReadM SNP 0033.scaffold00127 307920 1 A G - ReadM SNP 0033.scaffold00127 307933 1 C T - ReadM SNP 0033.scaffold00127 307985 1 G A - ReadM SNP 0033.scaffold00127 308075 1 G T - ReadM SNP 0033.scaffold00127 308102 1 A G - ReadM SNP 0033.scaffold00127 308166 1 C T - ReadM SNP 0033.scaffold00127 308173 1 C T - ReadM SNP 0033.scaffold00127 308286 1 G A - ReadM INDEL 0033.scaffold00127 308409 1 . T - ReadM SNP 0033.scaffold00127 308428 1 T C - ReadM SNP 0033.scaffold00127 308477 1 G T - ReadM SNP 0033.scaffold00127 308506 1 T C - ReadM SNP 0033.scaffold00127 308619 1 A G - ReadM SNP 0033.scaffold00127 308935 1 A G - ReadM INDEL 0033.scaffold00127 309130 1 A . - ReadM SNP 0033.scaffold00127 309158 1 G T - ReadM SNP 0033.scaffold00127 309437 1 T C - ReadM INDEL 0033.scaffold00127 309463 1 T . - ReadM SNP 0033.scaffold00127 309567 1 A C - ReadM SNP 0033.scaffold00127 309588 1 C T - ReadM SNP 0033.scaffold00127 309626 1 A T - ReadM SNP 0033.scaffold00127 309672 1 C T - ReadM SNP 0033.scaffold00127 309760 1 G A - ReadM SNP 0033.scaffold00127 309778 1 A T - ReadM SNP 0033.scaffold00127 309871 2 CA TG - ReadM SNP 0033.scaffold00127 309963 1 T C - ReadM SNP 0033.scaffold00127 309973 1 T C - ReadM SNP 0033.scaffold00127 310005 1 A G - ReadM SNP 0033.scaffold00127 310034 1 A G - ReadM SNP 0033.scaffold00127 310077 1 T C - ReadM SNP 0033.scaffold00127 310088 1 G A - ReadM SNP 0033.scaffold00127 310141 1 C T - ReadM SNP 0033.scaffold00127 310149 1 A G - ReadM SNP 0033.scaffold00127 310159 1 A T - ReadM SNP 0033.scaffold00127 310319 1 C T - ReadM SNP 0033.scaffold00127 310378 1 G A - ReadM SNP 0033.scaffold00127 310467 1 T G - ReadM SNP 0033.scaffold00127 310521 1 G T - ReadM SNP 0033.scaffold00127 310608 1 C A - ReadM SNP 0033.scaffold00127 310635 1 T C - ReadM SNP 0033.scaffold00127 310943 1 C T - ReadM SNP 0033.scaffold00127 310995 1 C T - ReadM SNP 0033.scaffold00127 311018 1 T C - ReadM INDEL 0033.scaffold00127 311031 1 A . - ReadM SNP 0033.scaffold00127 311068 1 A C - ReadM SNP 0033.scaffold00127 311089 1 T A - ReadM SNP 0033.scaffold00127 311174 1 T C - ReadM SNP 0033.scaffold00127 311277 1 G T - ReadM SNP 0033.scaffold00127 311303 1 T G - ReadM SNP 0033.scaffold00127 311350 1 T C - ReadM SNP 0033.scaffold00127 311380 1 G A - ReadM SNP 0033.scaffold00127 311617 1 G A - ReadM SNP 0033.scaffold00127 311624 1 A G - ReadM SNP 0033.scaffold00127 311646 1 T C - ReadM SNP 0033.scaffold00127 311692 1 A G - ReadM SNP 0033.scaffold00127 311750 1 T C - ReadM SNP 0033.scaffold00127 311847 1 G T - ReadM SNP 0033.scaffold00127 311936 1 C A - ReadM SNP 0033.scaffold00127 311978 1 T C - Both INDEL 0033.scaffold00127 312014 1 . G scaffold15418 Both SNP 0033.scaffold00127 312020 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 312225 1 T A scaffold15418 Both SNP 0033.scaffold00127 312304 1 A G scaffold15418 ScafM INDEL 0033.scaffold00127 312377 1 . T scaffold15418 ScafM SNP 0033.scaffold00127 312411 1 G T scaffold15418 ScafM SNP 0033.scaffold00127 312465 2 TT CA scaffold15418 ScafM SNP 0033.scaffold00127 312473 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 312775 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 312791 3 ... TAT scaffold15418 ScafM INDEL 0033.scaffold00127 312881 1 . A scaffold15418 ScafM SNP 0033.scaffold00127 313001 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 313869 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 313896 1 T C scaffold15418 Both SNP 0033.scaffold00127 314030 1 T A scaffold15418 Both SNP 0033.scaffold00127 314035 1 G A scaffold15418 Both SNP 0033.scaffold00127 314072 1 C A scaffold15418 ScafM SNP 0033.scaffold00127 314153 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 314161 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 314190 1 C . scaffold15418 ScafM SNP 0033.scaffold00127 314203 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 314206 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 314221 1 C T scaffold15418 ScafM INDEL 0033.scaffold00127 314265 59 ........................................................... GGAATTTCCTTGGGCTCCTTGGGCTGACTTAATTTCCCAATCAAAAAAAAAAAAAAGGA scaffold15418 ScafM SNP 0033.scaffold00127 314311 1 A C scaffold15418 Both SNP 0033.scaffold00127 314328 1 T C scaffold15418 Both SNP 0033.scaffold00127 314344 1 G T scaffold15418 ReadM SNP 0033.scaffold00127 314523 1 G C - ReadM SNP 0033.scaffold00127 314595 1 G C - ReadM SNP 0033.scaffold00127 314600 1 G A - ScafM INDEL 0033.scaffold00127 314798 3 AGG ... scaffold15418 ScafM INDEL 0033.scaffold00127 314804 2 GC .. scaffold15418 ScafM INDEL 0033.scaffold00127 314807 1 T . scaffold15418 Both SNP 0033.scaffold00127 314888 1 A C scaffold15418 Both SNP 0033.scaffold00127 314918 1 T C scaffold15418 Both SNP 0033.scaffold00127 315073 1 C A scaffold15418 Both SNP 0033.scaffold00127 315162 1 G A scaffold15418 Both SNP 0033.scaffold00127 315198 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 315245 1 A C scaffold15418 ScafM INDEL 0033.scaffold00127 315335 2 .. AA scaffold15418 ScafM SNP 0033.scaffold00127 315345 1 A T scaffold15418 ScafM INDEL 0033.scaffold00127 315382 5 ..... ACTCT scaffold15418 ScafM SNP 0033.scaffold00127 315388 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 315403 1 T . scaffold15418 ScafM SNP 0033.scaffold00127 315441 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 315452 1 C G scaffold15418 ScafM SNP 0033.scaffold00127 315468 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 315472 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 315492 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 315683 1 G T scaffold15418 ScafM SNP 0033.scaffold00127 315717 1 A C scaffold15418 ScafM INDEL 0033.scaffold00127 315756 1 . T scaffold15418 ScafM SNP 0033.scaffold00127 315765 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 320826 1 . T scaffold15418 ScafM SNP 0033.scaffold00127 320849 1 C A scaffold15418 ScafM SNP 0033.scaffold00127 320851 1 T A scaffold15418 ScafM SNP 0033.scaffold00127 320868 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 320883 1 A T scaffold15418 ScafM SNP 0033.scaffold00127 320914 1 A T scaffold15418 ScafM SNP 0033.scaffold00127 320938 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 321011 1 C A scaffold15418 ScafM INDEL 0033.scaffold00127 321034 2 .. GA scaffold15418 ScafM SNP 0033.scaffold00127 321064 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 321069 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 321076 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 321083 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 322611 1 A T scaffold15418 ScafM SNP 0033.scaffold00127 322615 1 C A scaffold15418 ScafM SNP 0033.scaffold00127 322684 1 C G scaffold15418 ScafM SNP 0033.scaffold00127 322711 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 322760 1 C T scaffold15418 ScafM SNP 0033.scaffold00127 322765 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 322786 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 322800 1 A T scaffold15418 ScafM INDEL 0033.scaffold00127 322808 2 TA .. scaffold15418 ScafM INDEL 0033.scaffold00127 322852 10 TGCTCATTAC .......... scaffold15418 ScafM SNP 0033.scaffold00127 322864 1 A G scaffold15418 ScafM INDEL 0033.scaffold00127 322872 6 TTTGTT ...... scaffold15418 ScafM SNP 0033.scaffold00127 322879 1 A T scaffold15418 ScafM SNP 0033.scaffold00127 322903 1 C T scaffold15418 ScafM INDEL 0033.scaffold00127 322915 1 T . scaffold15418 ScafM SNP 0033.scaffold00127 322918 1 G A scaffold15418 ScafM SNP 0033.scaffold00127 322926 1 T G scaffold15418 ScafM SNP 0033.scaffold00127 322935 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 322955 1 T C scaffold15418 ScafM INDEL 0033.scaffold00127 322980 2 .G AA scaffold15418 ScafM SNP 0033.scaffold00127 323030 1 T A scaffold15418 ScafM INDEL 0033.scaffold00127 323036 1 T . scaffold15418 ScafM SNP 0033.scaffold00127 323041 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 323052 1 T C scaffold15418 ScafM SNP 0033.scaffold00127 323072 1 A G scaffold15418 ScafM SNP 0033.scaffold00127 327080 1 C G scaffold15418 ReadM SNP 0033.scaffold00127 335778 1 G A - ScafM SNP 0033.scaffold00127 337059 2 AC GA scaffold2267 ScafM SNP 0033.scaffold00127 337092 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 337128 1 C T scaffold2267 ReadM SNP 0033.scaffold00127 337400 1 T G - ScafM INDEL 0033.scaffold00127 337611 1 . T scaffold2267 ScafM INDEL 0033.scaffold00127 337613 3 ... TTA scaffold2267 ScafM INDEL 0033.scaffold00127 337614 1 . A scaffold2267 ScafM INDEL 0033.scaffold00127 337616 7 ....... CTATAAA scaffold2267 ScafM SNP 0033.scaffold00127 337682 1 C T scaffold2267 Both SNP 0033.scaffold00127 337700 1 G A scaffold2267 Both SNP 0033.scaffold00127 337829 1 C T scaffold2267 Both INDEL 0033.scaffold00127 337885 1 . T scaffold2267 ReadM SNP 0033.scaffold00127 338125 1 C T - Both SNP 0033.scaffold00127 338165 1 G C scaffold2267 Both SNP 0033.scaffold00127 338173 1 G A scaffold2267 ReadM SNP 0033.scaffold00127 338241 1 T G - ReadM SNP 0033.scaffold00127 338283 1 A G - ReadM SNP 0033.scaffold00127 338330 1 G A - Both SNP 0033.scaffold00127 338423 1 T A scaffold2267 Both SNP 0033.scaffold00127 338501 1 T A scaffold2267 Both SNP 0033.scaffold00127 338572 1 T A scaffold2267 Both SNP 0033.scaffold00127 338592 1 G A scaffold2267 Both SNP 0033.scaffold00127 338883 1 G C scaffold2267 Both SNP 0033.scaffold00127 338928 1 G C scaffold2267 Both SNP 0033.scaffold00127 339582 1 C T scaffold2267 Both SNP 0033.scaffold00127 339893 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 340027 2 AA .. scaffold2267 Both SNP 0033.scaffold00127 340694 1 A G scaffold2267 Both SNP 0033.scaffold00127 340741 1 A C scaffold2267 Both SNP 0033.scaffold00127 340908 1 T C scaffold2267 Both SNP 0033.scaffold00127 341479 1 A C scaffold2267 Both SNP 0033.scaffold00127 341524 1 C T scaffold2267 Both INDEL 0033.scaffold00127 341634 1 . A scaffold2267 Both SNP 0033.scaffold00127 341906 1 C T scaffold2267 Both SNP 0033.scaffold00127 341917 1 T C scaffold2267 Both SNP 0033.scaffold00127 341950 1 T A scaffold2267 Both SNP 0033.scaffold00127 341984 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 342194 2 TC CT scaffold2267 Both INDEL 0033.scaffold00127 342238 1 . T scaffold2267 Both SNP 0033.scaffold00127 342252 1 T G scaffold2267 Both SNP 0033.scaffold00127 342268 1 A G scaffold2267 Both SNP 0033.scaffold00127 342334 1 A G scaffold2267 Both INDEL 0033.scaffold00127 342359 1 . A scaffold2267 Both SNP 0033.scaffold00127 342382 1 C T scaffold2267 Both SNP 0033.scaffold00127 342437 1 G C scaffold2267 Both SNP 0033.scaffold00127 342461 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 342497 2 CT AA scaffold2267 ScafM SNP 0033.scaffold00127 342532 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 342537 3 AGG ... scaffold2267 ScafM INDEL 0033.scaffold00127 342543 2 TC .. scaffold2267 ScafM INDEL 0033.scaffold00127 342571 12 ............ GCCAACTGCCAA scaffold2267 ScafM INDEL 0033.scaffold00127 342577 1 . A scaffold2267 ScafM SNP 0033.scaffold00127 342595 3 AAG TTA scaffold2267 ScafM SNP 0033.scaffold00127 342604 1 C G scaffold2267 ScafM SNP 0033.scaffold00127 342627 1 A T scaffold2267 ScafM INDEL 0033.scaffold00127 342670 3 CGC ... scaffold2267 ScafM INDEL 0033.scaffold00127 342675 5 TGTCG ..... scaffold2267 ScafM SNP 0033.scaffold00127 342702 1 A T scaffold2267 ScafM INDEL 0033.scaffold00127 342708 1 . T scaffold2267 ScafM SNP 0033.scaffold00127 342712 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 342727 1 G C scaffold2267 ScafM INDEL 0033.scaffold00127 342757 13 ............. TATCATCAAACTA scaffold2267 ScafM SNP 0033.scaffold00127 342770 1 A T scaffold2267 ScafM INDEL 0033.scaffold00127 342793 1 T . scaffold2267 ScafM SNP 0033.scaffold00127 342810 1 C G scaffold2267 ScafM SNP 0033.scaffold00127 342826 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 342828 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 342844 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 342863 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 342867 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 342890 1 A C scaffold2267 ScafM SNP 0033.scaffold00127 342899 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 342929 1 G A scaffold2267 ScafM INDEL 0033.scaffold00127 342930 2 .. CC scaffold2267 ScafM SNP 0033.scaffold00127 342931 2 GG TA scaffold2267 ScafM SNP 0033.scaffold00127 342935 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 342941 1 . A scaffold2267 ScafM SNP 0033.scaffold00127 342943 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 342960 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 342971 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 342997 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 343012 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 343019 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 343024 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 343029 1 A G scaffold2267 ScafM INDEL 0033.scaffold00127 343092 3 CTA ... scaffold2267 ScafM INDEL 0033.scaffold00127 343096 1 A . scaffold2267 ScafM INDEL 0033.scaffold00127 343104 2 AA .. scaffold2267 ScafM SNP 0033.scaffold00127 343110 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 343114 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 343142 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 343177 1 T A scaffold2267 ScafM INDEL 0033.scaffold00127 343207 1 . T scaffold2267 ScafM SNP 0033.scaffold00127 343234 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 343255 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 343260 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 343285 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 343290 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 343306 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 343314 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 343362 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 343373 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 343381 2 .. TG scaffold2267 ScafM SNP 0033.scaffold00127 343402 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 344432 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 344454 1 T G scaffold2267 ScafM SNP 0033.scaffold00127 344456 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 344470 1 G T scaffold2267 ScafM SNP 0033.scaffold00127 346371 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 346380 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 346383 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 346767 1 C G scaffold2267 ScafM INDEL 0033.scaffold00127 346777 1 . A scaffold2267 ScafM SNP 0033.scaffold00127 346782 2 TC AA scaffold2267 ScafM SNP 0033.scaffold00127 346785 4 CTCG AAAA scaffold2267 ScafM SNP 0033.scaffold00127 346831 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 346840 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 346841 2 .. TC scaffold2267 ScafM SNP 0033.scaffold00127 346845 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 346848 1 G C scaffold2267 ScafM SNP 0033.scaffold00127 346851 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 346858 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 353061 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 353084 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 353087 1 . A scaffold2267 ScafM SNP 0033.scaffold00127 353091 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 353116 2 GG AC scaffold2267 ScafM SNP 0033.scaffold00127 353119 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 353328 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 353332 1 T G scaffold2267 ScafM SNP 0033.scaffold00127 353336 1 C G scaffold2267 ScafM SNP 0033.scaffold00127 353338 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 353342 1 T G scaffold2267 ScafM INDEL 0033.scaffold00127 353344 1 . G scaffold2267 ScafM INDEL 0033.scaffold00127 353372 1 T . scaffold2267 ScafM SNP 0033.scaffold00127 353377 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 353419 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 353439 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 353452 1 A G scaffold2267 ScafM INDEL 0033.scaffold00127 353456 4 .... TTAA scaffold2267 ScafM SNP 0033.scaffold00127 353524 2 AT TA scaffold2267 ScafM SNP 0033.scaffold00127 353764 1 C G scaffold2267 ScafM SNP 0033.scaffold00127 354200 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354202 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 354219 1 A G scaffold2267 ScafM INDEL 0033.scaffold00127 354444 3 ... AAC scaffold2267 ScafM SNP 0033.scaffold00127 354468 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354474 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 354481 2 CC TA scaffold2267 ScafM SNP 0033.scaffold00127 354485 2 CG TA scaffold2267 ScafM SNP 0033.scaffold00127 354491 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354512 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354518 1 C G scaffold2267 ScafM SNP 0033.scaffold00127 354527 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 354563 2 TT .. scaffold2267 ScafM SNP 0033.scaffold00127 354587 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 354600 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354603 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 354607 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 354628 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 354636 1 T G scaffold2267 ScafM INDEL 0033.scaffold00127 354639 1 . T scaffold2267 ScafM INDEL 0033.scaffold00127 354640 1 . T scaffold2267 ScafM INDEL 0033.scaffold00127 354643 17 ................. TTGCCCAAATTTAGGAT scaffold2267 ScafM INDEL 0033.scaffold00127 354647 18 .................. GCTCACCAAATCTGAAAC scaffold2267 ScafM INDEL 0033.scaffold00127 354648 1 . T scaffold2267 ScafM SNP 0033.scaffold00127 354669 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 354676 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354683 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 354695 1 G T scaffold2267 ScafM SNP 0033.scaffold00127 354717 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 354751 2 TA .. scaffold2267 ScafM SNP 0033.scaffold00127 354777 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354783 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 354802 1 . G scaffold2267 ScafM SNP 0033.scaffold00127 354826 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 354832 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 354878 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 354893 1 A G scaffold2267 ScafM INDEL 0033.scaffold00127 354894 5 ..... GTTTT scaffold2267 ScafM INDEL 0033.scaffold00127 354938 8 ........ TTGTAAAA scaffold2267 ScafM SNP 0033.scaffold00127 354957 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 354961 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 354983 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 355010 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 355032 2 .. TT scaffold2267 ScafM SNP 0033.scaffold00127 355039 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 355281 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 355295 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 355475 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 355533 1 C A scaffold2267 ScafM INDEL 0033.scaffold00127 355570 22 ...................... AGTTGTCCTTTTGTTTGGGTTC scaffold2267 ScafM SNP 0033.scaffold00127 355596 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 355606 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 355615 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 356974 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 356997 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 357003 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357010 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357048 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 357052 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357067 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 357070 2 GA .. scaffold2267 ScafM SNP 0033.scaffold00127 357089 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 357094 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357102 2 CT TC scaffold2267 ScafM SNP 0033.scaffold00127 357116 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 357119 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 357136 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 357138 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 357142 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 357167 1 C T scaffold2267 ScafM INDEL 0033.scaffold00127 357169 6 CAAGGG .....T scaffold2267 ScafM SNP 0033.scaffold00127 357194 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 357201 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357203 2 TG GA scaffold2267 ScafM SNP 0033.scaffold00127 357220 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 357222 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 357226 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 357229 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 357246 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 357248 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357252 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357266 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 357276 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 357279 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 357281 1 A G scaffold2267 ScafM INDEL 0033.scaffold00127 357294 2 AG .. scaffold2267 ScafM SNP 0033.scaffold00127 357306 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 357312 1 T G scaffold2267 ScafM INDEL 0033.scaffold00127 357313 2 .. CC scaffold2267 ScafM INDEL 0033.scaffold00127 358034 1 A . scaffold21392 ScafM INDEL 0033.scaffold00127 360096 1 A . scaffold10236 ScafM SNP 0033.scaffold00127 361188 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 361229 1 T G scaffold2267 ScafM INDEL 0033.scaffold00127 361337 2 AA .. scaffold2267 ScafM SNP 0033.scaffold00127 361344 2 AC CT scaffold2267 ScafM INDEL 0033.scaffold00127 361380 3 ... TAG scaffold2267 ScafM SNP 0033.scaffold00127 361384 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 361419 1 G T scaffold2267 ScafM SNP 0033.scaffold00127 361443 1 C G scaffold2267 ScafM INDEL 0033.scaffold00127 361525 1 . T scaffold2267 ScafM INDEL 0033.scaffold00127 363363 2 AT .G scaffold2267 ScafM SNP 0033.scaffold00127 363373 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 363384 1 C A scaffold2267 ScafM SNP 0033.scaffold00127 363396 1 T A scaffold2267 ScafM SNP 0033.scaffold00127 363399 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 363414 1 C T scaffold2267 ScafM SNP 0033.scaffold00127 363678 1 G C scaffold2267 ScafM SNP 0033.scaffold00127 363693 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 364247 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 364281 1 A C scaffold2267 ScafM SNP 0033.scaffold00127 364283 1 A T scaffold2267 ScafM SNP 0033.scaffold00127 364293 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 364310 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 364320 1 T C scaffold2267 ScafM INDEL 0033.scaffold00127 364327 1 G . scaffold2267 ScafM SNP 0033.scaffold00127 364333 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 364362 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 364402 1 T G scaffold2267 ScafM SNP 0033.scaffold00127 364467 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 364471 1 A G scaffold2267 ScafM SNP 0033.scaffold00127 364476 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 364510 1 A T scaffold2267 ScafM INDEL 0033.scaffold00127 364518 3 ... TAT scaffold2267 ScafM SNP 0033.scaffold00127 364521 1 G A scaffold2267 ScafM SNP 0033.scaffold00127 364555 1 G T scaffold2267 ScafM SNP 0033.scaffold00127 364571 1 A C scaffold2267 ScafM INDEL 0033.scaffold00127 364586 4 TATA .... scaffold2267 ScafM SNP 0033.scaffold00127 364603 1 T C scaffold2267 ScafM SNP 0033.scaffold00127 364615 1 G A scaffold2267 ReadM SNP 0033.scaffold00127 365306 1 G A - ReadM SNP 0033.scaffold00127 365890 1 A C - ReadM SNP 0033.scaffold00127 365926 1 T C - ReadM SNP 0033.scaffold00127 365931 1 G A - ScafM SNP 0033.scaffold00127 366992 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 367004 2 CA TC scaffold13911 ScafM SNP 0033.scaffold00127 367008 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 367028 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 367042 2 GA AT scaffold13911 ScafM SNP 0033.scaffold00127 367064 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 367087 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 367106 1 T C scaffold13911 ScafM INDEL 0033.scaffold00127 367164 3 AGT ... scaffold13911 ScafM SNP 0033.scaffold00127 367168 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 367184 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 367200 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 367203 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 367238 1 C G scaffold13911 ScafM SNP 0033.scaffold00127 367276 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 367284 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 367313 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 367320 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 367325 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 367339 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 368418 1 A T scaffold13911 ScafM INDEL 0033.scaffold00127 368420 6 AAAAAG ...... scaffold13911 ScafM SNP 0033.scaffold00127 368428 1 A G scaffold13911 ScafM INDEL 0033.scaffold00127 368437 1 . C scaffold13911 ScafM SNP 0033.scaffold00127 368449 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 368453 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 368463 1 T A scaffold13911 ScafM INDEL 0033.scaffold00127 368493 1 A . scaffold13911 ScafM SNP 0033.scaffold00127 368502 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 368505 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 368517 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 368528 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 368532 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 368539 1 T C scaffold13911 ScafM INDEL 0033.scaffold00127 368542 1 G . scaffold13911 ScafM SNP 0033.scaffold00127 368549 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 368582 2 TC CT scaffold13911 ScafM SNP 0033.scaffold00127 368624 1 C T scaffold13911 ScafM INDEL 0033.scaffold00127 368857 3 ... TGT scaffold13911 ScafM SNP 0033.scaffold00127 368870 4 ACAA TTTT scaffold13911 ScafM SNP 0033.scaffold00127 368875 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 368883 1 C G scaffold13911 ScafM SNP 0033.scaffold00127 370170 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370187 1 C G scaffold13911 ScafM SNP 0033.scaffold00127 370191 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370226 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 370231 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370299 3 GTG TCA scaffold13911 ScafM SNP 0033.scaffold00127 370303 2 AA GT scaffold13911 ScafM SNP 0033.scaffold00127 370328 1 C A scaffold13911 ScafM INDEL 0033.scaffold00127 370498 5 ..... AGCTA scaffold13911 ScafM SNP 0033.scaffold00127 370635 3 AAG TGA scaffold13911 ScafM SNP 0033.scaffold00127 370639 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 370665 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370667 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370720 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 370732 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 370756 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 370766 3 TTG CAA scaffold13911 ScafM SNP 0033.scaffold00127 370792 1 G C scaffold13911 ScafM SNP 0033.scaffold00127 370799 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 370802 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 370806 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370815 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370818 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370840 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370850 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 370866 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 370870 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370892 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370906 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370915 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370921 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 370931 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 370937 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 370988 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 370996 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 371000 1 C T scaffold13911 ScafM INDEL 0033.scaffold00127 371109 2 TG .. scaffold13911 ScafM INDEL 0033.scaffold00127 371115 1 . G scaffold13911 ScafM SNP 0033.scaffold00127 371123 1 A G scaffold13911 ScafM INDEL 0033.scaffold00127 371143 2 .. GT scaffold13911 ScafM INDEL 0033.scaffold00127 371147 1 . G scaffold13911 Both SNP 0033.scaffold00127 371247 1 A T scaffold13911 Both SNP 0033.scaffold00127 371261 1 A T scaffold13911 ScafM INDEL 0033.scaffold00127 371385 2 .. AA scaffold13911 ScafM SNP 0033.scaffold00127 371391 3 TTT AAC scaffold13911 Both INDEL 0033.scaffold00127 371811 1 . T scaffold13911 Both INDEL 0033.scaffold00127 372047 2 .. TT scaffold13911 Both SNP 0033.scaffold00127 372137 1 G T scaffold13911 Both SNP 0033.scaffold00127 372298 1 A G scaffold13911 Both SNP 0033.scaffold00127 372311 1 C T scaffold13911 Both SNP 0033.scaffold00127 372395 1 T C scaffold13911 Both SNP 0033.scaffold00127 372435 1 T C scaffold13911 Both SNP 0033.scaffold00127 372457 1 G T scaffold13911 Both SNP 0033.scaffold00127 372524 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 372545 2 CA TG scaffold13911 ScafM SNP 0033.scaffold00127 372575 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 372579 1 G C scaffold13911 ScafM SNP 0033.scaffold00127 372591 1 C G scaffold13911 Both SNP 0033.scaffold00127 372616 1 C A scaffold13911 Both SNP 0033.scaffold00127 372887 1 G T scaffold13911 Both SNP 0033.scaffold00127 373184 1 A G scaffold13911 Both SNP 0033.scaffold00127 373190 1 C T scaffold13911 Both SNP 0033.scaffold00127 373894 1 G A scaffold13911 Both SNP 0033.scaffold00127 374130 1 C G scaffold13911 Both SNP 0033.scaffold00127 374310 1 C T scaffold13911 Both SNP 0033.scaffold00127 374646 1 C T scaffold13911 Both SNP 0033.scaffold00127 374741 1 T C scaffold13911 Both SNP 0033.scaffold00127 375398 1 T C scaffold13911 Both INDEL 0033.scaffold00127 376001 1 T . scaffold13911 Both SNP 0033.scaffold00127 376186 1 G C scaffold13911 Both SNP 0033.scaffold00127 376815 1 A G scaffold13911 Both SNP 0033.scaffold00127 377619 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 377667 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 378258 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 378261 1 A C scaffold13911 ReadM SNP 0033.scaffold00127 378442 1 A T - ReadM SNP 0033.scaffold00127 378613 1 T C - ReadM SNP 0033.scaffold00127 378767 1 T C - ReadM SNP 0033.scaffold00127 378789 1 T C - ReadM SNP 0033.scaffold00127 378940 1 T C - ReadM SNP 0033.scaffold00127 379126 1 C T - ReadM SNP 0033.scaffold00127 379155 1 T C - ReadM SNP 0033.scaffold00127 379208 1 A G - ReadM SNP 0033.scaffold00127 379654 1 T C - ReadM SNP 0033.scaffold00127 379926 1 T C - ReadM SNP 0033.scaffold00127 379979 1 T A - ScafM SNP 0033.scaffold00127 380309 1 A T scaffold13911 Both INDEL 0033.scaffold00127 380311 1 T . scaffold13911 Both SNP 0033.scaffold00127 380788 1 T G scaffold13911 Both SNP 0033.scaffold00127 381537 1 A C scaffold13911 Both INDEL 0033.scaffold00127 381779 1 G . scaffold13911 ReadM INDEL 0033.scaffold00127 381967 1 A . - Both SNP 0033.scaffold00127 382152 1 T C scaffold13911 Both SNP 0033.scaffold00127 382169 1 A G scaffold13911 Both SNP 0033.scaffold00127 382393 1 T C scaffold13911 ScafM INDEL 0033.scaffold00127 382454 7 ....... TTATATA scaffold13911 ScafM INDEL 0033.scaffold00127 382560 3 ... TTT scaffold13911 Both SNP 0033.scaffold00127 382610 1 T G scaffold13911 Both INDEL 0033.scaffold00127 382761 1 . C scaffold13911 Both SNP 0033.scaffold00127 382929 1 A G scaffold13911 ScafM INDEL 0033.scaffold00127 382970 8 GGTTGGTG ........ scaffold13911 ScafM INDEL 0033.scaffold00127 383011 11 TTCGTGACTCG ........... scaffold13911 ScafM SNP 0033.scaffold00127 383044 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 383092 1 C T scaffold13911 Both SNP 0033.scaffold00127 383163 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 383239 2 GA AC scaffold13911 Both SNP 0033.scaffold00127 383306 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 383364 1 C G scaffold13911 ScafM SNP 0033.scaffold00127 383406 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 383421 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 383432 2 AT .. scaffold13911 ScafM INDEL 0033.scaffold00127 383438 1 A . scaffold13911 ScafM SNP 0033.scaffold00127 383488 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 383492 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 383513 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 383545 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 383556 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 383560 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 383564 1 C T scaffold13911 ScafM INDEL 0033.scaffold00127 383567 10 .......... AAACTAAAAA scaffold13911 ScafM SNP 0033.scaffold00127 383588 1 T G scaffold13911 ScafM INDEL 0033.scaffold00127 383591 3 ..A TTT scaffold13911 ScafM SNP 0033.scaffold00127 383605 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 383641 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 383680 1 C G scaffold13911 ScafM SNP 0033.scaffold00127 384459 1 G C scaffold13911 ScafM SNP 0033.scaffold00127 384475 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 384477 2 CC TT scaffold13911 ScafM SNP 0033.scaffold00127 384557 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 384633 1 C G scaffold13911 Both SNP 0033.scaffold00127 384694 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 384753 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 384763 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 384803 2 AA GG scaffold13911 Both SNP 0033.scaffold00127 384923 1 T C scaffold13911 Both SNP 0033.scaffold00127 384930 1 G A scaffold13911 Both SNP 0033.scaffold00127 384953 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 385008 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 385020 3 GTG ACC scaffold13911 ScafM SNP 0033.scaffold00127 385052 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 385152 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 385154 1 G C scaffold13911 ScafM INDEL 0033.scaffold00127 385310 1 . G scaffold13911 ScafM SNP 0033.scaffold00127 385312 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 385325 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 385343 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 385364 1 G C scaffold13911 Both INDEL 0033.scaffold00127 385436 1 . A scaffold13911 Both SNP 0033.scaffold00127 385455 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 385751 7 TTTTTTT ....... scaffold13911 ScafM SNP 0033.scaffold00127 385768 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 386020 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 386040 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 386087 1 C T scaffold13911 ScafM INDEL 0033.scaffold00127 386088 1 . A scaffold13911 ScafM SNP 0033.scaffold00127 386106 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 386110 1 C G scaffold13911 ScafM INDEL 0033.scaffold00127 386139 7 ....... AATAGAC scaffold13911 ScafM INDEL 0033.scaffold00127 386140 1 . A scaffold13911 ScafM SNP 0033.scaffold00127 386159 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 386170 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 386178 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 386208 1 T C scaffold13911 ScafM INDEL 0033.scaffold00127 386237 2 AA .. scaffold13911 ScafM SNP 0033.scaffold00127 386242 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 386253 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 386257 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 386266 1 G C scaffold13911 ScafM SNP 0033.scaffold00127 386282 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 386302 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 386304 1 . T scaffold13911 ScafM SNP 0033.scaffold00127 386323 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 386349 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 386367 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 386466 1 T C scaffold13911 ScafM INDEL 0033.scaffold00127 386551 1 T . scaffold13911 ScafM SNP 0033.scaffold00127 386555 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 386592 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 387640 1 T G scaffold13911 ScafM INDEL 0033.scaffold00127 387646 3 ... GTT scaffold13911 ScafM SNP 0033.scaffold00127 387648 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 387675 2 TC .. scaffold13911 ScafM SNP 0033.scaffold00127 387688 1 C A scaffold13911 ScafM SNP 0033.scaffold00127 387697 1 G T scaffold13911 ScafM SNP 0033.scaffold00127 387704 1 A G scaffold13911 Both SNP 0033.scaffold00127 387780 1 T A scaffold13911 Both SNP 0033.scaffold00127 387820 1 T C scaffold13911 Both SNP 0033.scaffold00127 387822 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 387928 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 387932 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 387942 1 A . scaffold13911 ScafM SNP 0033.scaffold00127 387954 1 C G scaffold13911 Both SNP 0033.scaffold00127 388090 1 T A scaffold13911 Both SNP 0033.scaffold00127 388134 1 A T scaffold13911 Both INDEL 0033.scaffold00127 388208 2 TC .. scaffold13911 Both SNP 0033.scaffold00127 388250 1 A G scaffold13911 Both SNP 0033.scaffold00127 388299 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 388394 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 388396 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 388398 1 A T scaffold13911 ScafM SNP 0033.scaffold00127 388402 1 A C scaffold13911 ScafM SNP 0033.scaffold00127 388643 1 T A scaffold13911 ScafM INDEL 0033.scaffold00127 388664 3 ... TGT scaffold13911 ScafM SNP 0033.scaffold00127 388700 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 388760 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 388838 1 A . scaffold13911 ScafM SNP 0033.scaffold00127 388841 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 389057 1 A G scaffold13911 Both SNP 0033.scaffold00127 389157 1 T A scaffold13911 ScafM SNP 0033.scaffold00127 389178 1 T G scaffold13911 ScafM SNP 0033.scaffold00127 389348 2 AC GT scaffold13911 ScafM INDEL 0033.scaffold00127 389354 8 ...TTTTT CAAAAAAA scaffold13911 Both SNP 0033.scaffold00127 389478 1 G A scaffold13911 Both SNP 0033.scaffold00127 389489 1 A C scaffold13911 Both INDEL 0033.scaffold00127 389545 1 A . scaffold13911 Both SNP 0033.scaffold00127 389634 1 T C scaffold13911 Both SNP 0033.scaffold00127 389662 1 C G scaffold13911 Both SNP 0033.scaffold00127 389687 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 389758 3 ... CCC scaffold13911 Both SNP 0033.scaffold00127 389897 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 389923 1 C T scaffold13911 ScafM SNP 0033.scaffold00127 389953 2 CC AT scaffold13911 ScafM SNP 0033.scaffold00127 389993 1 A G scaffold13911 ScafM SNP 0033.scaffold00127 390079 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 390108 1 T C scaffold13911 ScafM SNP 0033.scaffold00127 390142 1 G A scaffold13911 ScafM SNP 0033.scaffold00127 390148 1 G A scaffold13911 ScafM INDEL 0033.scaffold00127 394526 7 GCAAAAA ....... scaffold13911 ScafM SNP 0033.scaffold00127 394574 1 C G scaffold13911 ScafM INDEL 0033.scaffold00127 394589 1 C . scaffold13911 ScafM SNP 0033.scaffold00127 394665 1 T C scaffold13911 ReadM INDEL 0033.scaffold00127 395464 1 . A - ReadM SNP 0033.scaffold00127 395524 1 C G - ScafM SNP 0033.scaffold00127 396121 1 T C scaffold15952 ScafM SNP 0033.scaffold00127 396124 1 A G scaffold15952 ScafM INDEL 0033.scaffold00127 396148 1 G . scaffold15952 ScafM SNP 0033.scaffold00127 396150 2 GA AT scaffold15952 ScafM SNP 0033.scaffold00127 396180 1 C T scaffold15952 ScafM SNP 0033.scaffold00127 397072 1 C T scaffold15952 ScafM INDEL 0033.scaffold00127 397084 5 ..... TTAAT scaffold15952 ScafM SNP 0033.scaffold00127 397166 1 T C scaffold15952 ScafM SNP 0033.scaffold00127 397180 1 C T scaffold15952 ScafM SNP 0033.scaffold00127 397184 1 A G scaffold15952 ScafM SNP 0033.scaffold00127 397189 1 C T scaffold15952 ScafM SNP 0033.scaffold00127 398055 1 C A scaffold15952 ScafM SNP 0033.scaffold00127 398080 1 A G scaffold15952 ScafM SNP 0033.scaffold00127 398082 1 A G scaffold15952 ScafM SNP 0033.scaffold00127 398105 1 G T scaffold15952 ScafM SNP 0033.scaffold00127 398162 1 T C scaffold15952 ScafM INDEL 0033.scaffold00127 398187 1 . C scaffold15952 ScafM SNP 0033.scaffold00127 398214 1 A T scaffold15952 ReadM SNP 0033.scaffold00127 398994 2 AA GC - ScafM SNP 0033.scaffold00127 399117 1 G A scaffold15952 ScafM SNP 0033.scaffold00127 399129 1 T G scaffold15952 ScafM SNP 0033.scaffold00127 399171 1 T A scaffold15952 ScafM SNP 0033.scaffold00127 399196 1 G A scaffold15952 ScafM SNP 0033.scaffold00127 399201 1 G A scaffold15952 Both SNP 0033.scaffold00127 399251 1 G A scaffold15952 ScafM SNP 0033.scaffold00127 399321 1 T A scaffold15952 ScafM SNP 0033.scaffold00127 399364 1 A G scaffold15952 ScafM SNP 0033.scaffold00127 399372 1 C A scaffold15952 Both SNP 0033.scaffold00127 399393 1 A C scaffold15952 Both SNP 0033.scaffold00127 399529 1 G A scaffold15952 Both INDEL 0033.scaffold00127 399581 1 . T scaffold15952 ReadM SNP 0033.scaffold00127 399636 1 G A - ReadM SNP 0033.scaffold00127 399642 1 G A - ReadM SNP 0033.scaffold00127 399647 1 T C - Both SNP 0033.scaffold00127 399826 1 C T scaffold15952 ReadM SNP 0033.scaffold00127 408415 1 T C - ReadM SNP 0033.scaffold00127 408425 1 A G - ReadM SNP 0033.scaffold00127 409186 1 T C - Both SNP 0033.scaffold00127 412476 1 G A scaffold15952 ScafM SNP 0033.scaffold00127 412511 1 C T scaffold15952 ScafM INDEL 0033.scaffold00127 412610 5 ..... GCTAA scaffold15952 ReadM SNP 0033.scaffold00127 412611 1 C G - ScafM INDEL 0033.scaffold00127 412611 2 .. TG scaffold15952 Both SNP 0033.scaffold00127 412872 1 G A scaffold15952 Both SNP 0033.scaffold00127 412966 1 A C scaffold15952 ReadM SNP 0033.scaffold00127 413108 1 C A - ReadM SNP 0033.scaffold00127 413215 1 C T - ReadM SNP 0033.scaffold00127 413241 1 A G - ReadM SNP 0033.scaffold00127 413300 1 T C - ReadM SNP 0033.scaffold00127 413311 1 C T - ReadM INDEL 0033.scaffold00127 413353 1 . G - ReadM SNP 0033.scaffold00127 413372 1 G A - ReadM SNP 0033.scaffold00127 413492 1 C G - ReadM SNP 0033.scaffold00127 413515 1 T C - ReadM SNP 0033.scaffold00127 413631 1 A G - ReadM SNP 0033.scaffold00127 413778 1 A G - ReadM SNP 0033.scaffold00127 413840 1 T A - ReadM INDEL 0033.scaffold00127 413899 2 AA .. - ReadM SNP 0033.scaffold00127 413976 1 A G - ReadM SNP 0033.scaffold00127 414101 1 T G - ReadM SNP 0033.scaffold00127 414123 1 A T - ReadM SNP 0033.scaffold00127 414141 1 C G - ReadM SNP 0033.scaffold00127 414169 1 G A - ReadM SNP 0033.scaffold00127 414283 1 A G - ReadM SNP 0033.scaffold00127 414303 1 A C - ReadM SNP 0033.scaffold00127 414364 1 G C - ReadM SNP 0033.scaffold00127 414436 1 A G - ReadM SNP 0033.scaffold00127 414495 1 T C - ReadM SNP 0033.scaffold00127 414501 1 A G - ReadM SNP 0033.scaffold00127 414589 1 G T - ReadM SNP 0033.scaffold00127 414599 1 T C - ReadM SNP 0033.scaffold00127 414637 1 T A - ReadM SNP 0033.scaffold00127 414699 1 C T - ReadM SNP 0033.scaffold00127 414710 1 C T - ReadM SNP 0033.scaffold00127 414721 1 G A - ReadM SNP 0033.scaffold00127 414963 1 G A - ReadM SNP 0033.scaffold00127 414978 1 C T - ReadM SNP 0033.scaffold00127 414988 1 A G - ReadM SNP 0033.scaffold00127 415123 1 A G - ReadM SNP 0033.scaffold00127 415163 1 C T - ReadM SNP 0033.scaffold00127 415244 1 G C - ReadM INDEL 0033.scaffold00127 415302 1 . G - ReadM SNP 0033.scaffold00127 415321 1 C G - ReadM SNP 0033.scaffold00127 415342 1 A C - ReadM SNP 0033.scaffold00127 415426 1 G T - ReadM SNP 0033.scaffold00127 415434 1 A G - ReadM SNP 0033.scaffold00127 415530 1 A G - ReadM SNP 0033.scaffold00127 415549 1 G A - ReadM SNP 0033.scaffold00127 415602 1 A T - ReadM SNP 0033.scaffold00127 415732 1 C T - ReadM SNP 0033.scaffold00127 415739 1 A G - ReadM SNP 0033.scaffold00127 415771 1 G A - ReadM SNP 0033.scaffold00127 415929 1 G A - ReadM SNP 0033.scaffold00127 415934 1 G A - ReadM SNP 0033.scaffold00127 415969 1 T G - ReadM SNP 0033.scaffold00127 416042 1 G A - ReadM SNP 0033.scaffold00127 416093 1 A G - ReadM SNP 0033.scaffold00127 416109 1 A G - ReadM SNP 0033.scaffold00127 416227 1 T G - ReadM SNP 0033.scaffold00127 416331 1 A C - ReadM SNP 0033.scaffold00127 416447 1 T C - ReadM SNP 0033.scaffold00127 416508 1 A T - ReadM SNP 0033.scaffold00127 416591 1 G A - ReadM SNP 0033.scaffold00127 416597 1 C T - ReadM SNP 0033.scaffold00127 416660 1 T C - ReadM SNP 0033.scaffold00127 416895 1 T A - ReadM SNP 0033.scaffold00127 416933 1 C A - ReadM SNP 0033.scaffold00127 416994 1 C T - ReadM SNP 0033.scaffold00127 417075 1 A G - ReadM SNP 0033.scaffold00127 417095 1 T G - ReadM SNP 0033.scaffold00127 417559 1 C T - ReadM SNP 0033.scaffold00127 417561 1 A G - ReadM SNP 0033.scaffold00127 417685 1 T C - ReadM SNP 0033.scaffold00127 417715 1 G A - ReadM INDEL 0033.scaffold00127 417730 1 T . - Both SNP 0033.scaffold00127 418017 1 C G scaffold15952 Both SNP 0033.scaffold00127 418055 1 A C scaffold15952 Both SNP 0033.scaffold00127 418087 1 G A scaffold15952 Both SNP 0033.scaffold00127 418150 1 T C scaffold15952 Both SNP 0033.scaffold00127 418189 1 A T scaffold15952 Both SNP 0033.scaffold00127 418197 1 T C scaffold15952 ReadM SNP 0033.scaffold00127 418710 1 C G - ReadM SNP 0033.scaffold00127 418783 2 AC GT - ReadM SNP 0033.scaffold00127 418856 1 C T - ReadM SNP 0033.scaffold00127 418931 1 T A - ReadM SNP 0033.scaffold00127 418941 1 C T - ReadM INDEL 0033.scaffold00127 418955 1 . C - ReadM SNP 0033.scaffold00127 419121 1 A C - ReadM SNP 0033.scaffold00127 419370 1 C A - ReadM SNP 0033.scaffold00127 419376 1 T A - ReadM SNP 0033.scaffold00127 419426 1 A G - ReadM SNP 0033.scaffold00127 419601 1 A G - ReadM SNP 0033.scaffold00127 419618 1 C T - ReadM SNP 0033.scaffold00127 419721 1 C T - ReadM SNP 0033.scaffold00127 419738 1 C A - ReadM SNP 0033.scaffold00127 419741 1 T C - ScafM SNP 0033.scaffold00127 419910 1 T C scaffold15952 ScafM SNP 0033.scaffold00127 419933 1 C A scaffold15952 ScafM SNP 0033.scaffold00127 420143 1 C T scaffold15952 ScafM INDEL 0033.scaffold00127 420152 1 A . scaffold15952 ScafM SNP 0033.scaffold00127 420249 1 T C scaffold15952 ScafM SNP 0033.scaffold00127 420318 1 T C scaffold15952 ScafM SNP 0033.scaffold00127 421331 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 421336 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 421357 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 421384 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 422957 2 AG GA scaffold14778 ScafM SNP 0033.scaffold00127 422989 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 423048 1 C G scaffold14778 ScafM SNP 0033.scaffold00127 423058 1 G A scaffold14778 ScafM SNP 0033.scaffold00127 423088 1 C A scaffold14778 ScafM SNP 0033.scaffold00127 423105 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 423110 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 423116 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 423126 1 T C scaffold14778 ScafM SNP 0033.scaffold00127 423143 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 423145 2 TT AC scaffold14778 ScafM SNP 0033.scaffold00127 423153 1 G A scaffold14778 ScafM INDEL 0033.scaffold00127 423199 14 .............. TATAAAAAATTTGG scaffold14778 ScafM INDEL 0033.scaffold00127 423224 6 ...... AAAAAA scaffold14778 ScafM SNP 0033.scaffold00127 423231 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 423277 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 423310 1 T A scaffold14778 ScafM SNP 0033.scaffold00127 423343 1 G A scaffold14778 Both SNP 0033.scaffold00127 423366 1 T G scaffold14778 Both INDEL 0033.scaffold00127 423404 1 T . scaffold14778 ScafM SNP 0033.scaffold00127 423516 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 423520 1 G A scaffold14778 ScafM INDEL 0033.scaffold00127 423555 3 ... CTT scaffold14778 ScafM SNP 0033.scaffold00127 423590 1 A C scaffold14778 ScafM SNP 0033.scaffold00127 423592 2 CC TA scaffold14778 ScafM SNP 0033.scaffold00127 423618 1 A T scaffold14778 Both SNP 0033.scaffold00127 423890 1 C T scaffold14778 Both SNP 0033.scaffold00127 423894 1 A G scaffold14778 Both SNP 0033.scaffold00127 423914 1 A T scaffold14778 Both SNP 0033.scaffold00127 424101 1 C T scaffold14778 Both SNP 0033.scaffold00127 424123 1 C G scaffold14778 ScafM SNP 0033.scaffold00127 424168 1 A G scaffold14778 Both SNP 0033.scaffold00127 424286 1 C G scaffold14778 Both SNP 0033.scaffold00127 424312 1 C A scaffold14778 Both SNP 0033.scaffold00127 424321 1 G T scaffold14778 ScafM SNP 0033.scaffold00127 424334 1 G A scaffold14778 ScafM SNP 0033.scaffold00127 424352 1 T G scaffold14778 ScafM SNP 0033.scaffold00127 424378 1 T A scaffold14778 ScafM SNP 0033.scaffold00127 424381 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 424409 1 C A scaffold14778 ScafM SNP 0033.scaffold00127 424420 2 AC TG scaffold14778 ScafM SNP 0033.scaffold00127 424423 1 T A scaffold14778 ScafM SNP 0033.scaffold00127 424429 1 G A scaffold14778 Both SNP 0033.scaffold00127 424444 1 T G scaffold14778 Both SNP 0033.scaffold00127 424558 1 C T scaffold14778 Both SNP 0033.scaffold00127 424669 1 G A scaffold14778 Both SNP 0033.scaffold00127 424708 1 G T scaffold14778 Both SNP 0033.scaffold00127 424720 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 424733 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 424735 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 424919 1 C T scaffold14778 Both SNP 0033.scaffold00127 424961 1 T A scaffold14778 Both SNP 0033.scaffold00127 425066 1 G T scaffold14778 Both SNP 0033.scaffold00127 425115 1 G C scaffold14778 Both SNP 0033.scaffold00127 425249 1 G T scaffold14778 Both SNP 0033.scaffold00127 425494 1 C G scaffold14778 ScafM SNP 0033.scaffold00127 425572 1 G A scaffold14778 ScafM INDEL 0033.scaffold00127 425643 1 A . scaffold14778 ScafM INDEL 0033.scaffold00127 425704 1 G . scaffold14778 ScafM INDEL 0033.scaffold00127 425726 1 . T scaffold14778 ScafM SNP 0033.scaffold00127 425772 1 T G scaffold14778 ScafM INDEL 0033.scaffold00127 425780 7 ....... TTACAAC scaffold14778 ScafM INDEL 0033.scaffold00127 426004 1 . A scaffold14778 ScafM SNP 0033.scaffold00127 426067 1 G A scaffold14778 Both SNP 0033.scaffold00127 426171 1 T C scaffold14778 Both SNP 0033.scaffold00127 426191 1 T A scaffold14778 ScafM INDEL 0033.scaffold00127 426231 1 . A scaffold14778 ScafM INDEL 0033.scaffold00127 426249 3 ... AAC scaffold14778 ScafM SNP 0033.scaffold00127 426314 1 G C scaffold14778 ScafM SNP 0033.scaffold00127 426370 1 T C scaffold14778 ScafM INDEL 0033.scaffold00127 426425 2 GA .. scaffold14778 ScafM SNP 0033.scaffold00127 426430 2 CG GA scaffold14778 ScafM SNP 0033.scaffold00127 426437 1 G T scaffold14778 ScafM SNP 0033.scaffold00127 426444 1 G A scaffold14778 ScafM SNP 0033.scaffold00127 426448 1 T A scaffold14778 ScafM SNP 0033.scaffold00127 426467 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 426470 1 A G scaffold14778 ScafM SNP 0033.scaffold00127 426482 1 T C scaffold14778 ScafM SNP 0033.scaffold00127 426523 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 426838 1 C G scaffold14778 ScafM SNP 0033.scaffold00127 426896 1 G A scaffold14778 ScafM SNP 0033.scaffold00127 426911 1 T C scaffold14778 ScafM SNP 0033.scaffold00127 426926 1 T C scaffold14778 ScafM SNP 0033.scaffold00127 426928 1 T C scaffold14778 ScafM INDEL 0033.scaffold00127 426938 3 ... TGT scaffold14778 Both SNP 0033.scaffold00127 427002 1 A T scaffold14778 ScafM SNP 0033.scaffold00127 427477 1 T G scaffold14778 ScafM SNP 0033.scaffold00127 427504 1 A C scaffold14778 ScafM SNP 0033.scaffold00127 427525 2 GC AA scaffold14778 ScafM SNP 0033.scaffold00127 427558 1 T A scaffold14778 ScafM SNP 0033.scaffold00127 427573 1 T C scaffold14778 ScafM SNP 0033.scaffold00127 427575 1 G A scaffold14778 ScafM SNP 0033.scaffold00127 427611 1 G C scaffold14778 ScafM SNP 0033.scaffold00127 427650 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 427702 1 T G scaffold14778 ScafM SNP 0033.scaffold00127 427721 1 G A scaffold14778 Both SNP 0033.scaffold00127 427869 1 T A scaffold14778 Both SNP 0033.scaffold00127 427877 1 A T scaffold14778 Both SNP 0033.scaffold00127 428098 1 T G scaffold14778 Both SNP 0033.scaffold00127 428212 1 G A scaffold14778 Both SNP 0033.scaffold00127 428253 1 G C scaffold14778 Both SNP 0033.scaffold00127 428383 1 G A scaffold14778 ScafM INDEL 0033.scaffold00127 430373 2 .. TA scaffold14778 ScafM SNP 0033.scaffold00127 438298 1 T G scaffold14778 ScafM INDEL 0033.scaffold00127 438892 1 . A scaffold14778 ReadM SNP 0033.scaffold00127 439843 1 G A - Both INDEL 0033.scaffold00127 449849 3 ACC ... scaffold14778 ScafM INDEL 0033.scaffold00127 453973 1 . T scaffold14778 ScafM INDEL 0033.scaffold00127 457284 6 ...... CCCCCC scaffold14778 ReadM SNP 0033.scaffold00127 459536 1 A G - Both SNP 0033.scaffold00127 461678 1 C A scaffold14778 Both SNP 0033.scaffold00127 461925 1 C T scaffold14778 ScafM SNP 0033.scaffold00127 470054 1 A C scaffold5005 ScafM SNP 0033.scaffold00127 470101 2 AA GT scaffold5005 ScafM SNP 0033.scaffold00127 470124 2 TT CA scaffold5005 ScafM SNP 0033.scaffold00127 470132 1 C T scaffold5005 ScafM SNP 0033.scaffold00127 470138 1 A G scaffold5005 ScafM SNP 0033.scaffold00127 470157 1 T A scaffold5005 ScafM SNP 0033.scaffold00127 470165 1 C T scaffold5005 ScafM SNP 0033.scaffold00127 470172 1 G T scaffold5005 ScafM SNP 0033.scaffold00127 470178 1 T A scaffold5005 ScafM SNP 0033.scaffold00127 470192 1 T C scaffold5005 ScafM SNP 0033.scaffold00127 470228 1 T A scaffold5005 ScafM SNP 0033.scaffold00127 470282 1 T C scaffold5005 ScafM SNP 0033.scaffold00127 470292 1 A G scaffold5005 ScafM SNP 0033.scaffold00127 470296 1 T C scaffold5005 ScafM SNP 0033.scaffold00127 470304 1 C T scaffold5005 ScafM SNP 0033.scaffold00127 470345 1 A G scaffold5005 ScafM SNP 0033.scaffold00127 470373 1 C T scaffold5005 ScafM SNP 0033.scaffold00127 470376 1 A C scaffold5005 ScafM SNP 0033.scaffold00127 470378 1 T C scaffold5005 ScafM INDEL 0033.scaffold00127 470415 3 ... AAT scaffold5005 ScafM INDEL 0033.scaffold00127 470425 1 C . scaffold5005 ScafM SNP 0033.scaffold00127 470429 3 CCG TTT scaffold5005 ScafM SNP 0033.scaffold00127 470435 1 A G scaffold5005 ScafM SNP 0033.scaffold00127 470442 1 C T scaffold5005 ScafM SNP 0033.scaffold00127 470460 1 G A scaffold5005 ScafM SNP 0033.scaffold00127 470476 1 G A scaffold5005 ScafM SNP 0033.scaffold00127 470507 2 TG GA scaffold5005 ScafM SNP 0033.scaffold00127 470539 1 G A scaffold5005 ScafM SNP 0033.scaffold00127 470561 1 G A scaffold5005 ScafM INDEL 0033.scaffold00127 475085 28 ............................ GGGGGGGGGGGGGGGGGGGGGGGGGTTT scaffold21898 ScafM SNP 0033.scaffold00127 486432 1 A T scaffold797 ScafM SNP 0033.scaffold00127 490558 2 CA AC scaffold797 ScafM INDEL 0033.scaffold00127 492681 9 ......... CCCCCCCCC scaffold797 ScafM SNP 0033.scaffold00127 499978 1 A G scaffold797 ScafM INDEL 0033.scaffold00127 502907 20 TAAATATTTTTTGAGGGTTT .................... scaffold797 ScafM SNP 0033.scaffold00127 507062 1 T A scaffold797 ReadM SNP 0033.scaffold00127 512724 1 G A - ReadM SNP 0033.scaffold00127 520364 1 C T - Both SNP 0033.scaffold00127 522858 1 T A scaffold797 Both SNP 0033.scaffold00127 523142 1 C G scaffold797 ScafM INDEL 0033.scaffold00127 524745 1 C . scaffold797 ScafM INDEL 0033.scaffold00127 527179 1 . T scaffold797 Both SNP 0033.scaffold00127 528253 1 A T scaffold797 ScafM INDEL 0033.scaffold00127 531166 2 AT .. scaffold797 ScafM INDEL 0033.scaffold00127 531171 12 TTTAAGAAGTAA ............ scaffold797 ScafM INDEL 0033.scaffold00127 531186 9 AAAAATGAG ......... scaffold797 ScafM INDEL 0033.scaffold00127 531197 12 ATCCTCAATGAT ............ scaffold797 ScafM INDEL 0033.scaffold00127 531210 3 AAA ... scaffold797 ScafM INDEL 0033.scaffold00127 545549 5 TTTCT ..... scaffold797 ScafM INDEL 0033.scaffold00127 555066 1 A . scaffold797 ReadM INDEL 0033.scaffold00127 557768 1 . A - ScafM SNP 0033.scaffold00127 577260 1 T C scaffold797 ScafM INDEL 0033.scaffold00127 577300 1 . A scaffold797 ReadM INDEL 0033.scaffold00127 577486 1 A . - ReadM SNP 0033.scaffold00127 595905 1 C T - ScafM SNP 0033.scaffold00127 600694 1 C T scaffold1622 Both SNP 0033.scaffold00127 600895 1 C A scaffold1622 Both SNP 0033.scaffold00127 600901 1 A G scaffold1622 Both SNP 0033.scaffold00127 600907 1 C A scaffold1622 Both SNP 0033.scaffold00127 601102 1 T C scaffold1622 Both SNP 0033.scaffold00127 601132 1 G A scaffold1622 Both SNP 0033.scaffold00127 601158 1 G T scaffold1622 Both SNP 0033.scaffold00127 601222 1 T A scaffold1622 Both SNP 0033.scaffold00127 601265 1 G A scaffold1622 Both SNP 0033.scaffold00127 601319 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 601677 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 601691 1 G A scaffold1622 ScafM SNP 0033.scaffold00127 601693 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 601732 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 601799 1 A G scaffold1622 ScafM SNP 0033.scaffold00127 601892 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 601944 1 T A scaffold1622 Both SNP 0033.scaffold00127 601978 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 601981 1 T C scaffold1622 ScafM SNP 0033.scaffold00127 602006 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 602023 1 A C scaffold1622 ScafM SNP 0033.scaffold00127 602085 1 A G scaffold1622 ScafM SNP 0033.scaffold00127 602088 1 G A scaffold1622 ScafM SNP 0033.scaffold00127 602131 1 G A scaffold1622 ScafM SNP 0033.scaffold00127 602212 1 G A scaffold1622 ScafM SNP 0033.scaffold00127 602225 1 G T scaffold1622 ScafM SNP 0033.scaffold00127 602260 1 A T scaffold1622 ScafM SNP 0033.scaffold00127 602274 1 T C scaffold1622 ScafM SNP 0033.scaffold00127 602303 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 602329 1 T C scaffold1622 ScafM SNP 0033.scaffold00127 602520 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 602525 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 602652 1 C T scaffold1622 ScafM SNP 0033.scaffold00127 602667 1 A T scaffold1622 ScafM SNP 0033.scaffold00127 602695 1 A C scaffold1622 ScafM SNP 0033.scaffold00127 602703 1 T A scaffold1622 ScafM SNP 0033.scaffold00127 602735 1 A C scaffold1622 ScafM SNP 0033.scaffold00127 603499 1 G A scaffold1622 ScafM SNP 0033.scaffold00127 617167 1 C T scaffold3084 ScafM SNP 0033.scaffold00127 617188 1 A C scaffold3084 ScafM SNP 0033.scaffold00127 617203 1 G A scaffold3084 ScafM SNP 0033.scaffold00127 617209 1 C A scaffold3084 ScafM SNP 0033.scaffold00127 617218 1 T A scaffold3084 ScafM SNP 0033.scaffold00127 617243 3 GTG TCA scaffold3084 ScafM SNP 0033.scaffold00127 617251 1 G A scaffold3084 ScafM SNP 0033.scaffold00127 617287 1 G A scaffold3084 ScafM SNP 0033.scaffold00127 617295 1 T C scaffold3084 ScafM SNP 0033.scaffold00127 617316 1 T C scaffold3084 ScafM SNP 0033.scaffold00127 617319 2 CG TA scaffold3084 ScafM SNP 0033.scaffold00127 617323 1 G A scaffold3084 ScafM SNP 0033.scaffold00127 617326 1 G T scaffold3084 ScafM SNP 0033.scaffold00127 617328 1 C T scaffold3084 ScafM SNP 0033.scaffold00127 617330 1 A C scaffold3084 ScafM SNP 0033.scaffold00127 617343 1 C T scaffold3084 ScafM SNP 0033.scaffold00127 617358 2 AA GT scaffold3084 ScafM SNP 0033.scaffold00127 617384 1 T A scaffold3084 ScafM SNP 0033.scaffold00127 617390 1 T G scaffold3084 ScafM SNP 0033.scaffold00127 617393 1 C T scaffold3084 ScafM SNP 0033.scaffold00127 617395 1 C G scaffold3084 ScafM SNP 0033.scaffold00127 617403 1 A T scaffold3084 ScafM SNP 0033.scaffold00127 617430 1 G A scaffold3084 ScafM SNP 0033.scaffold00127 618331 1 A T scaffold797 ScafM SNP 0033.scaffold00127 618841 1 A T scaffold797 ScafM SNP 0033.scaffold00127 618865 1 G C scaffold797 ScafM INDEL 0033.scaffold00127 622453 1 . G scaffold797 ScafM SNP 0033.scaffold00127 622466 1 A T scaffold797 ScafM INDEL 0033.scaffold00127 622476 1 A . scaffold797 ScafM SNP 0033.scaffold00127 622481 1 A C scaffold797 ScafM SNP 0033.scaffold00127 622517 1 T C scaffold797 ScafM SNP 0033.scaffold00127 622520 1 C T scaffold797 ScafM SNP 0033.scaffold00127 622536 1 A C scaffold797 ScafM SNP 0033.scaffold00127 622543 1 T G scaffold797 ScafM SNP 0033.scaffold00127 622552 1 G A scaffold797 ScafM INDEL 0033.scaffold00127 622566 4 .... TACT scaffold797 ScafM SNP 0033.scaffold00127 624641 1 T A scaffold240 ScafM SNP 0033.scaffold00127 624644 1 C T scaffold240 ScafM SNP 0033.scaffold00127 624733 1 G T scaffold240 ScafM SNP 0033.scaffold00127 624777 1 A G scaffold240 ScafM SNP 0033.scaffold00127 624905 1 G A scaffold240 ScafM SNP 0033.scaffold00127 624917 1 C T scaffold240 ScafM SNP 0033.scaffold00127 624990 1 T C scaffold240 ScafM SNP 0033.scaffold00127 625079 1 C T scaffold240 ScafM INDEL 0033.scaffold00127 625153 2 .. TT scaffold240 ScafM INDEL 0033.scaffold00127 625156 1 . T scaffold240 ScafM SNP 0033.scaffold00127 625189 1 T C scaffold240 ReadM SNP 0033.scaffold00127 625817 1 C T - Both SNP 0033.scaffold00127 627333 1 T A scaffold797 Both SNP 0033.scaffold00127 627351 1 G A scaffold797 Both SNP 0033.scaffold00127 627384 1 T C scaffold797 Both SNP 0033.scaffold00127 627411 1 T C scaffold797 Both SNP 0033.scaffold00127 627417 1 C T scaffold797 Both SNP 0033.scaffold00127 627482 1 T C scaffold797 ScafM INDEL 0033.scaffold00127 627510 3 GTT ... scaffold797 Both SNP 0033.scaffold00127 627709 1 T C scaffold797 ScafM SNP 0033.scaffold00127 627960 1 A G scaffold797 ScafM SNP 0033.scaffold00127 627968 1 T A scaffold797 ReadM INDEL 0033.scaffold00127 628057 1 T . - ReadM SNP 0033.scaffold00127 628171 1 T A - ReadM SNP 0033.scaffold00127 628199 1 T C - Both SNP 0033.scaffold00127 628289 1 T G scaffold797 Both SNP 0033.scaffold00127 628294 1 C G scaffold797 Both INDEL 0033.scaffold00127 628619 1 . A scaffold797 Both SNP 0033.scaffold00127 628648 1 G A scaffold797 Both SNP 0033.scaffold00127 628659 1 A G scaffold797 ScafM INDEL 0033.scaffold00127 629626 1 . A scaffold797 ScafM INDEL 0033.scaffold00127 633995 2 .. TT scaffold797 ReadM SNP 0033.scaffold00127 648811 1 C A - ReadM SNP 0033.scaffold00127 648846 1 G A - ScafM SNP 0033.scaffold00127 652842 1 T C scaffold7389 ScafM INDEL 0033.scaffold00127 652875 2 .. TG scaffold7389 ScafM SNP 0033.scaffold00127 652898 1 A G scaffold7389 ScafM SNP 0033.scaffold00127 652968 1 C A scaffold7389 ScafM SNP 0033.scaffold00127 652984 1 C T scaffold7389 ScafM SNP 0033.scaffold00127 653004 1 G A scaffold7389 ScafM SNP 0033.scaffold00127 653012 1 T C scaffold7389 ScafM SNP 0033.scaffold00127 653024 1 G A scaffold7389 ScafM SNP 0033.scaffold00127 653032 1 T C scaffold7389 ScafM SNP 0033.scaffold00127 653052 1 A T scaffold7389 ScafM SNP 0033.scaffold00127 653060 1 A G scaffold7389 ScafM SNP 0033.scaffold00127 653119 1 A G scaffold7389 ScafM INDEL 0033.scaffold00127 653147 9 ......... TAGTTGTTA scaffold7389 ScafM SNP 0033.scaffold00127 653198 1 G A scaffold7389 ScafM SNP 0033.scaffold00127 655653 1 G C scaffold657 ScafM SNP 0033.scaffold00127 655655 1 A T scaffold657 ScafM INDEL 0033.scaffold00127 655669 6 AAAACG ...... scaffold657 ScafM SNP 0033.scaffold00127 655683 1 C G scaffold657 ScafM SNP 0033.scaffold00127 655688 1 T A scaffold657 ScafM SNP 0033.scaffold00127 655694 1 A T scaffold657 ScafM SNP 0033.scaffold00127 655762 1 A T scaffold657 ScafM INDEL 0033.scaffold00127 659198 2 .. AT scaffold6907 ScafM SNP 0033.scaffold00127 659339 1 C T scaffold6907 ScafM SNP 0033.scaffold00127 659547 1 G T scaffold6907 ScafM SNP 0033.scaffold00127 659549 1 G A scaffold6907 ScafM INDEL 0033.scaffold00127 659556 7 ....... GTGTTCA scaffold6907 ScafM INDEL 0033.scaffold00127 665533 5 TTTTT .AAAA scaffold3621 ScafM SNP 0033.scaffold00127 665566 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 665576 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 665583 4 .... GTTG scaffold3621 ScafM SNP 0033.scaffold00127 665633 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 665639 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 670109 1 C T scaffold36543 ScafM SNP 0033.scaffold00127 670188 1 G T scaffold36543 ScafM SNP 0033.scaffold00127 670191 1 C T scaffold36543 ScafM SNP 0033.scaffold00127 670234 1 C T scaffold36543 ScafM SNP 0033.scaffold00127 670280 1 A G scaffold36543 ScafM SNP 0033.scaffold00127 670286 1 G A scaffold36543 ScafM SNP 0033.scaffold00127 672348 1 T C scaffold797 ScafM SNP 0033.scaffold00127 672356 1 T C scaffold797 ScafM SNP 0033.scaffold00127 672721 1 A G scaffold797 ScafM SNP 0033.scaffold00127 672762 1 A T scaffold797 ScafM SNP 0033.scaffold00127 672785 1 A T scaffold797 ScafM INDEL 0033.scaffold00127 672865 1 . A scaffold797 ScafM SNP 0033.scaffold00127 672883 1 C T scaffold797 ScafM SNP 0033.scaffold00127 672991 1 T C scaffold797 ScafM SNP 0033.scaffold00127 673002 1 T C scaffold797 ScafM SNP 0033.scaffold00127 673136 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 673142 1 G C scaffold1425 ScafM INDEL 0033.scaffold00127 673152 2 TT .. scaffold1425 ScafM INDEL 0033.scaffold00127 673185 3 ... GCA scaffold1425 ScafM INDEL 0033.scaffold00127 673199 1 . T scaffold1425 ScafM SNP 0033.scaffold00127 673203 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 673249 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 673262 2 AT GG scaffold1425 ScafM SNP 0033.scaffold00127 673328 1 C A scaffold1425 ScafM INDEL 0033.scaffold00127 673330 1 T . scaffold1425 ScafM SNP 0033.scaffold00127 673335 1 A C scaffold1425 ScafM INDEL 0033.scaffold00127 673372 1 . T scaffold1425 ReadM SNP 0033.scaffold00127 673631 1 G A - ReadM SNP 0033.scaffold00127 673650 1 C T - ReadM SNP 0033.scaffold00127 673761 1 G A - ReadM SNP 0033.scaffold00127 673908 1 A G - ReadM SNP 0033.scaffold00127 673960 1 T C - ReadM SNP 0033.scaffold00127 674339 1 T C - ReadM SNP 0033.scaffold00127 674376 1 G A - ScafM SNP 0033.scaffold00127 674539 2 CA TT scaffold18392 ScafM SNP 0033.scaffold00127 674548 1 G A scaffold18392 ScafM SNP 0033.scaffold00127 674551 1 G A scaffold18392 ScafM SNP 0033.scaffold00127 674584 1 C T scaffold18392 ScafM SNP 0033.scaffold00127 674589 1 T C scaffold18392 ScafM SNP 0033.scaffold00127 674597 1 G T scaffold18392 ScafM SNP 0033.scaffold00127 674601 1 G A scaffold18392 ScafM SNP 0033.scaffold00127 674985 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 674998 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 675018 1 T C scaffold1425 ScafM SNP 0033.scaffold00127 675021 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 675024 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 675039 1 A T scaffold1425 ScafM SNP 0033.scaffold00127 675043 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 675051 1 T A scaffold1425 ScafM SNP 0033.scaffold00127 675059 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 675071 1 C A scaffold1425 ScafM SNP 0033.scaffold00127 675084 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 675102 1 T A scaffold1425 ScafM SNP 0033.scaffold00127 675131 1 T G scaffold1425 ScafM SNP 0033.scaffold00127 675144 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 675162 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 675164 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 675186 1 T A scaffold1425 ScafM SNP 0033.scaffold00127 675194 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 675196 1 A G scaffold1425 ScafM INDEL 0033.scaffold00127 675210 6 CTCCTC ...... scaffold1425 ScafM SNP 0033.scaffold00127 675219 3 TCT AGG scaffold1425 ScafM SNP 0033.scaffold00127 675224 1 C G scaffold1425 ScafM SNP 0033.scaffold00127 675234 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 675245 2 TA GT scaffold1425 Both SNP 0033.scaffold00127 675256 1 C T scaffold1425 ReadM SNP 0033.scaffold00127 677100 1 G A - ReadM SNP 0033.scaffold00127 677124 1 C T - ReadM SNP 0033.scaffold00127 677139 1 T C - ReadM SNP 0033.scaffold00127 677223 1 T A - ReadM SNP 0033.scaffold00127 677226 1 A G - ReadM SNP 0033.scaffold00127 677232 1 A G - ReadM SNP 0033.scaffold00127 677506 1 A G - ReadM SNP 0033.scaffold00127 677550 1 A C - ReadM SNP 0033.scaffold00127 677571 1 A G - ReadM SNP 0033.scaffold00127 677702 1 A C - ReadM SNP 0033.scaffold00127 677781 1 T A - ScafM INDEL 0033.scaffold00127 677859 1 T . scaffold1425 ScafM SNP 0033.scaffold00127 677868 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 677870 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 677885 1 T C scaffold1425 ScafM SNP 0033.scaffold00127 677889 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 677896 1 C A scaffold1425 ScafM SNP 0033.scaffold00127 677898 1 G A scaffold1425 ScafM INDEL 0033.scaffold00127 677906 5 ..... AGAAA scaffold1425 ScafM INDEL 0033.scaffold00127 677908 1 . G scaffold1425 ScafM INDEL 0033.scaffold00127 677909 5 ..... TTAAA scaffold1425 ScafM INDEL 0033.scaffold00127 677910 1 . C scaffold1425 ScafM INDEL 0033.scaffold00127 677914 1 . G scaffold1425 ScafM INDEL 0033.scaffold00127 677915 2 .. TT scaffold1425 ScafM INDEL 0033.scaffold00127 677916 1 . G scaffold1425 ScafM INDEL 0033.scaffold00127 677917 8 ........ ATTTAAGT scaffold1425 ScafM SNP 0033.scaffold00127 677924 1 A T scaffold1425 ScafM SNP 0033.scaffold00127 677929 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 677938 1 T C scaffold1425 ScafM INDEL 0033.scaffold00127 677952 1 . A scaffold1425 ScafM SNP 0033.scaffold00127 677988 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 677990 2 TG AT scaffold1425 ScafM SNP 0033.scaffold00127 677999 3 AAT GGC scaffold1425 ScafM SNP 0033.scaffold00127 678005 1 G A scaffold1425 ScafM INDEL 0033.scaffold00127 678014 1 T . scaffold1425 ScafM SNP 0033.scaffold00127 678048 1 G A scaffold1425 ScafM SNP 0033.scaffold00127 678054 1 G C scaffold1425 ScafM INDEL 0033.scaffold00127 678064 2 TT .. scaffold1425 ScafM INDEL 0033.scaffold00127 678090 3 ... AGC scaffold1425 ScafM SNP 0033.scaffold00127 678096 1 T C scaffold1425 ScafM INDEL 0033.scaffold00127 678110 1 . T scaffold1425 ScafM SNP 0033.scaffold00127 678115 1 C T scaffold1425 ScafM SNP 0033.scaffold00127 678161 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 678174 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 678229 1 A G scaffold1425 ScafM SNP 0033.scaffold00127 678240 1 C A scaffold1425 ScafM INDEL 0033.scaffold00127 678242 1 T . scaffold1425 ScafM SNP 0033.scaffold00127 678247 1 A C scaffold1425 ScafM INDEL 0033.scaffold00127 678284 1 . T scaffold1425 ScafM SNP 0033.scaffold00127 687134 1 A C scaffold797 ScafM INDEL 0033.scaffold00127 687168 6 TCTTTT ...... scaffold797 ScafM SNP 0033.scaffold00127 687178 1 T C scaffold797 ScafM SNP 0033.scaffold00127 687190 1 C T scaffold797 ScafM SNP 0033.scaffold00127 687216 1 T A scaffold797 ScafM INDEL 0033.scaffold00127 687720 1 . A scaffold797 ScafM INDEL 0033.scaffold00127 687721 1 . T scaffold797 ScafM SNP 0033.scaffold00127 687726 1 G A scaffold797 ScafM SNP 0033.scaffold00127 687913 1 C T scaffold797 ScafM SNP 0033.scaffold00127 687931 1 G T scaffold797 ReadM SNP 0033.scaffold00127 688060 1 T A - ReadM SNP 0033.scaffold00127 688125 1 G A - Both SNP 0033.scaffold00127 688164 1 G T scaffold797 ScafM INDEL 0033.scaffold00127 689627 1 . C scaffold797 ScafM SNP 0033.scaffold00127 689631 1 T C scaffold797 ScafM INDEL 0033.scaffold00127 689654 1 . A scaffold797 ReadM SNP 0033.scaffold00127 690004 1 T C - ScafM SNP 0033.scaffold00127 691158 1 C A scaffold797 ScafM SNP 0033.scaffold00127 691221 1 C T scaffold797 ReadM SNP 0033.scaffold00127 691335 1 G A - ReadM INDEL 0033.scaffold00127 691380 1 C . - ReadM SNP 0033.scaffold00127 691434 1 A C - ReadM SNP 0033.scaffold00127 691493 1 A G - ReadM SNP 0033.scaffold00127 691555 1 A T - ReadM SNP 0033.scaffold00127 691571 1 T A - ReadM SNP 0033.scaffold00127 691868 1 A T - ReadM SNP 0033.scaffold00127 691878 1 C A - ReadM SNP 0033.scaffold00127 691956 1 A T - ReadM SNP 0033.scaffold00127 692003 1 G A - ReadM INDEL 0033.scaffold00127 692011 1 G . - ScafM SNP 0033.scaffold00127 692054 1 T A scaffold797 Both SNP 0033.scaffold00127 692057 1 G A scaffold797 Both SNP 0033.scaffold00127 692124 1 T C scaffold797 ReadM SNP 0033.scaffold00127 692343 1 T G - ReadM SNP 0033.scaffold00127 692379 1 C T - ScafM SNP 0033.scaffold00127 692953 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 692988 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 692998 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 693054 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 693085 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 693109 4 .... ATAT scaffold3621 Both SNP 0033.scaffold00127 693195 1 G T scaffold3621 Both SNP 0033.scaffold00127 693299 1 G A scaffold3621 Both SNP 0033.scaffold00127 693356 1 G A scaffold3621 Both SNP 0033.scaffold00127 693362 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 693470 1 G C - ReadM SNP 0033.scaffold00127 693579 1 C T - ReadM INDEL 0033.scaffold00127 693586 1 A . - Both SNP 0033.scaffold00127 693646 1 C T scaffold3621 Both SNP 0033.scaffold00127 693665 1 C T scaffold3621 Both SNP 0033.scaffold00127 693735 1 T G scaffold3621 ReadM SNP 0033.scaffold00127 693794 1 A G - ReadM SNP 0033.scaffold00127 694916 1 A C - ReadM INDEL 0033.scaffold00127 695131 1 . A - ReadM SNP 0033.scaffold00127 695171 1 G A - ReadM SNP 0033.scaffold00127 697487 1 C T - ReadM SNP 0033.scaffold00127 720705 1 T A - ReadM SNP 0033.scaffold00127 720786 1 C T - ReadM SNP 0033.scaffold00127 720853 1 T C - ScafM SNP 0033.scaffold00127 720891 1 G A scaffold25557 ReadM SNP 0033.scaffold00127 721166 1 A G - ScafM SNP 0033.scaffold00127 723708 1 G A scaffold4886 ScafM SNP 0033.scaffold00127 723731 1 T C scaffold4886 ScafM INDEL 0033.scaffold00127 724264 16 ................ CCCTCTCTCCCTCTCT scaffold23155 ScafM SNP 0033.scaffold00127 724447 1 A G scaffold23155 ScafM SNP 0033.scaffold00127 725471 1 A G scaffold17534 ScafM SNP 0033.scaffold00127 725499 1 A G scaffold17534 ScafM INDEL 0033.scaffold00127 725628 2 .. AC scaffold17534 ScafM SNP 0033.scaffold00127 725644 1 G C scaffold17534 ScafM SNP 0033.scaffold00127 725654 1 C T scaffold17534 ScafM SNP 0033.scaffold00127 725665 1 A G scaffold17534 ScafM SNP 0033.scaffold00127 725669 1 C G scaffold17534 ScafM SNP 0033.scaffold00127 725715 1 A G scaffold17534 ScafM INDEL 0033.scaffold00127 725717 2 .. AA scaffold17534 ScafM SNP 0033.scaffold00127 725732 1 A G scaffold17534 ScafM INDEL 0033.scaffold00127 725744 1 . A scaffold17534 ScafM SNP 0033.scaffold00127 725774 1 A T scaffold17534 ScafM SNP 0033.scaffold00127 725794 1 C A scaffold17534 ScafM SNP 0033.scaffold00127 725834 1 C T scaffold17534 ScafM SNP 0033.scaffold00127 725883 1 A G scaffold17534 ScafM SNP 0033.scaffold00127 726857 1 A T scaffold9761 ScafM SNP 0033.scaffold00127 726862 1 A T scaffold9761 ScafM SNP 0033.scaffold00127 726879 1 A T scaffold9761 ScafM SNP 0033.scaffold00127 726918 1 T C scaffold9761 ScafM SNP 0033.scaffold00127 726927 1 C T scaffold9761 ScafM SNP 0033.scaffold00127 726934 1 A G scaffold9761 ScafM SNP 0033.scaffold00127 726948 1 A G scaffold9761 ScafM INDEL 0033.scaffold00127 726950 2 .C TA scaffold9761 ScafM SNP 0033.scaffold00127 726975 3 ATC GGT scaffold9761 ScafM SNP 0033.scaffold00127 726980 1 A T scaffold9761 ScafM SNP 0033.scaffold00127 726986 1 G T scaffold9761 ScafM SNP 0033.scaffold00127 727013 1 A G scaffold9761 ScafM SNP 0033.scaffold00127 727019 1 C G scaffold9761 ScafM SNP 0033.scaffold00127 727022 1 A G scaffold9761 ScafM SNP 0033.scaffold00127 727047 2 GG AT scaffold9761 Both SNP 0033.scaffold00127 729675 1 A T scaffold23155 ReadM INDEL 0033.scaffold00127 729746 1 . T - ReadM SNP 0033.scaffold00127 729826 1 A C - ScafM INDEL 0033.scaffold00127 738302 1 . C scaffold4484 ScafM INDEL 0033.scaffold00127 738309 1 T . scaffold4484 ScafM SNP 0033.scaffold00127 738336 2 AA GG scaffold4484 ScafM SNP 0033.scaffold00127 738342 1 C G scaffold4484 ScafM SNP 0033.scaffold00127 738365 1 A T scaffold4484 ScafM SNP 0033.scaffold00127 738369 1 C A scaffold4484 ScafM SNP 0033.scaffold00127 738372 1 G A scaffold4484 ScafM SNP 0033.scaffold00127 738378 1 G T scaffold4484 ScafM SNP 0033.scaffold00127 738397 1 A G scaffold4484 ScafM SNP 0033.scaffold00127 738401 1 T G scaffold4484 ScafM SNP 0033.scaffold00127 738458 1 C T scaffold4484 ScafM SNP 0033.scaffold00127 738461 1 C T scaffold4484 ScafM INDEL 0033.scaffold00127 738514 3 TAA ... scaffold3621 ScafM SNP 0033.scaffold00127 738532 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 738577 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 738602 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 738617 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 738624 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 738658 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 738671 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 738684 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 738686 2 TG AT scaffold3621 ScafM INDEL 0033.scaffold00127 738691 4 TTCA ...G scaffold3621 ScafM SNP 0033.scaffold00127 738697 2 AA TT scaffold3621 ScafM SNP 0033.scaffold00127 738703 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 738712 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 738749 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 738755 8 ........ GAATGAAA scaffold3621 ScafM INDEL 0033.scaffold00127 738862 2 .. CA scaffold3621 ScafM INDEL 0033.scaffold00127 738863 7 ....... ATTACTA scaffold3621 ScafM SNP 0033.scaffold00127 738891 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 738906 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 738945 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 738947 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 738965 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 738990 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 738997 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 739004 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 739011 2 GA AC scaffold3621 ScafM SNP 0033.scaffold00127 739023 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 739026 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 739051 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 739053 2 TC AT scaffold3621 ScafM SNP 0033.scaffold00127 739059 2 TT CC scaffold3621 ScafM SNP 0033.scaffold00127 739065 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 739074 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 739076 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 739112 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 739143 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 739151 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 739154 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 739195 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 739199 3 ... AAT scaffold3621 ScafM SNP 0033.scaffold00127 739523 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 739546 1 G A scaffold3621 Both SNP 0033.scaffold00127 739571 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 740806 1 G A - ReadM SNP 0033.scaffold00127 740846 1 G A - ReadM SNP 0033.scaffold00127 740910 1 A G - ScafM SNP 0033.scaffold00127 741231 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 741910 1 C T - ReadM SNP 0033.scaffold00127 741930 1 G A - ReadM SNP 0033.scaffold00127 742870 1 T G - Both SNP 0033.scaffold00127 742905 1 A T scaffold3621 Both SNP 0033.scaffold00127 742928 1 T C scaffold3621 ReadM INDEL 0033.scaffold00127 743141 1 G . - ScafM SNP 0033.scaffold00127 743161 1 T C scaffold3621 ReadM INDEL 0033.scaffold00127 743646 1 . T - ReadM SNP 0033.scaffold00127 743707 1 A G - ReadM SNP 0033.scaffold00127 743734 1 T A - ReadM SNP 0033.scaffold00127 743744 1 T A - ReadM SNP 0033.scaffold00127 743820 1 G T - ReadM SNP 0033.scaffold00127 743836 1 A G - ReadM SNP 0033.scaffold00127 743848 1 C T - ReadM SNP 0033.scaffold00127 743899 1 A G - ReadM INDEL 0033.scaffold00127 743986 1 . C - ReadM SNP 0033.scaffold00127 744040 1 T A - ReadM SNP 0033.scaffold00127 744073 1 A C - ReadM SNP 0033.scaffold00127 744317 1 A G - ReadM SNP 0033.scaffold00127 744453 1 A G - ReadM INDEL 0033.scaffold00127 744480 1 . T - Both SNP 0033.scaffold00127 744519 1 A T scaffold3621 ReadM SNP 0033.scaffold00127 744552 1 G A - ReadM SNP 0033.scaffold00127 744635 1 G T - ScafM SNP 0033.scaffold00127 745331 2 GT TA scaffold3621 ScafM SNP 0033.scaffold00127 745401 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 745481 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 745504 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 745509 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 745618 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 745664 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 745670 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 745694 1 C T scaffold3621 Both SNP 0033.scaffold00127 745728 1 T C scaffold3621 Both SNP 0033.scaffold00127 745780 1 C A scaffold3621 Both SNP 0033.scaffold00127 745785 1 A C scaffold3621 Both SNP 0033.scaffold00127 745912 1 C T scaffold3621 Both SNP 0033.scaffold00127 745918 1 G A scaffold3621 Both SNP 0033.scaffold00127 745946 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 746028 1 T C - ReadM INDEL 0033.scaffold00127 746105 1 A . - ReadM INDEL 0033.scaffold00127 746194 1 A . - ReadM SNP 0033.scaffold00127 746226 1 A G - ScafM INDEL 0033.scaffold00127 746292 4 .... ACAT scaffold3621 Both INDEL 0033.scaffold00127 746469 1 . C scaffold3621 ScafM SNP 0033.scaffold00127 746482 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 746517 6 ...... GAAATA scaffold3621 ScafM INDEL 0033.scaffold00127 746519 31 ............................... TATCTAGATGCAGCCATTCAGAGGACTTCAT scaffold3621 ScafM INDEL 0033.scaffold00127 746520 3 ... AAT scaffold3621 ScafM INDEL 0033.scaffold00127 747070 2 AA .. scaffold3621 ScafM SNP 0033.scaffold00127 747092 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 747270 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 747306 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 747350 1 A G - ReadM SNP 0033.scaffold00127 747443 1 C A - ReadM SNP 0033.scaffold00127 747481 1 G A - ReadM INDEL 0033.scaffold00127 747503 1 C . - ReadM SNP 0033.scaffold00127 747574 1 C T - ReadM SNP 0033.scaffold00127 747686 1 C T - ReadM SNP 0033.scaffold00127 747726 1 T C - ReadM SNP 0033.scaffold00127 747885 1 T C - ReadM SNP 0033.scaffold00127 747888 1 A G - ReadM SNP 0033.scaffold00127 747917 1 A G - ReadM SNP 0033.scaffold00127 747982 1 C G - ReadM SNP 0033.scaffold00127 747984 1 C G - ReadM SNP 0033.scaffold00127 747999 1 G C - ReadM SNP 0033.scaffold00127 748062 1 T G - ReadM SNP 0033.scaffold00127 748120 1 G A - ReadM SNP 0033.scaffold00127 748122 1 C A - ReadM SNP 0033.scaffold00127 748165 1 C A - ReadM SNP 0033.scaffold00127 748169 1 C T - ReadM INDEL 0033.scaffold00127 748245 1 . C - ReadM SNP 0033.scaffold00127 748552 1 C A - ReadM SNP 0033.scaffold00127 748655 1 T C - ReadM SNP 0033.scaffold00127 748778 1 G A - ReadM SNP 0033.scaffold00127 748826 1 T G - ReadM INDEL 0033.scaffold00127 748978 1 . C - ReadM SNP 0033.scaffold00127 749118 1 C T - ReadM INDEL 0033.scaffold00127 749182 1 . T - ReadM SNP 0033.scaffold00127 749219 1 T G - ReadM SNP 0033.scaffold00127 749266 1 G A - Both SNP 0033.scaffold00127 749280 1 T A scaffold3621 Both SNP 0033.scaffold00127 749344 1 A C scaffold3621 Both SNP 0033.scaffold00127 749376 1 T C scaffold3621 Both SNP 0033.scaffold00127 749401 1 A G scaffold3621 Both INDEL 0033.scaffold00127 749444 1 A . scaffold3621 Both SNP 0033.scaffold00127 749451 1 A G scaffold3621 Both SNP 0033.scaffold00127 749584 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 749703 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 750136 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 750147 1 C T scaffold3621 Both SNP 0033.scaffold00127 750286 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 750319 1 G T scaffold3621 Both SNP 0033.scaffold00127 750438 1 T G scaffold3621 ScafM INDEL 0033.scaffold00127 750461 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 750473 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 750498 1 A . scaffold3621 Both SNP 0033.scaffold00127 750526 1 C T scaffold3621 Both SNP 0033.scaffold00127 750543 1 T C scaffold3621 Both SNP 0033.scaffold00127 750577 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 750616 8 GGTGGTGT ........ scaffold3621 Both SNP 0033.scaffold00127 750680 1 G A scaffold3621 Both SNP 0033.scaffold00127 750684 1 A G scaffold3621 Both SNP 0033.scaffold00127 750731 1 A G scaffold3621 Both SNP 0033.scaffold00127 750749 1 A G scaffold3621 Both SNP 0033.scaffold00127 750825 1 T A scaffold3621 ReadM SNP 0033.scaffold00127 750906 1 A G - ReadM SNP 0033.scaffold00127 750913 1 A G - ReadM SNP 0033.scaffold00127 750936 1 C T - ReadM SNP 0033.scaffold00127 751036 1 C T - ReadM SNP 0033.scaffold00127 751057 1 G A - ReadM SNP 0033.scaffold00127 751089 1 C T - ReadM SNP 0033.scaffold00127 751109 1 A G - ScafM INDEL 0033.scaffold00127 751160 3 ... GAC scaffold3621 ScafM INDEL 0033.scaffold00127 751196 1 C . scaffold3621 ScafM SNP 0033.scaffold00127 751209 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 751211 1 G A scaffold3621 Both SNP 0033.scaffold00127 751228 1 A C scaffold3621 Both SNP 0033.scaffold00127 751261 1 A G scaffold3621 Both SNP 0033.scaffold00127 751401 1 A G scaffold3621 Both SNP 0033.scaffold00127 751498 1 A T scaffold3621 Both SNP 0033.scaffold00127 751518 1 G A scaffold3621 Both SNP 0033.scaffold00127 751528 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 751545 1 . G scaffold3621 Both SNP 0033.scaffold00127 751577 1 C T scaffold3621 Both SNP 0033.scaffold00127 751598 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 751683 1 T A scaffold3621 Both SNP 0033.scaffold00127 751762 1 C T scaffold3621 Both SNP 0033.scaffold00127 751774 1 G T scaffold3621 Both SNP 0033.scaffold00127 751922 1 C A scaffold3621 Both SNP 0033.scaffold00127 751970 1 T C scaffold3621 Both SNP 0033.scaffold00127 752003 1 A G scaffold3621 Both SNP 0033.scaffold00127 752059 1 G A scaffold3621 Both SNP 0033.scaffold00127 752140 1 T C scaffold3621 Both SNP 0033.scaffold00127 752197 1 T C scaffold3621 Both SNP 0033.scaffold00127 752206 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 752221 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 752232 1 T G scaffold3621 Both SNP 0033.scaffold00127 752271 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 752352 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 752386 1 . A scaffold3621 ScafM SNP 0033.scaffold00127 752391 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 752398 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 752553 1 C . scaffold3621 ScafM SNP 0033.scaffold00127 752558 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 752562 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 752592 2 .. AA scaffold3621 ScafM INDEL 0033.scaffold00127 753927 3 TAT ... scaffold3621 ScafM INDEL 0033.scaffold00127 753931 1 T . scaffold3621 ReadM SNP 0033.scaffold00127 754240 1 T C - ReadM INDEL 0033.scaffold00127 754266 1 A . - ReadM SNP 0033.scaffold00127 754417 1 C T - ReadM SNP 0033.scaffold00127 754444 1 C A - ReadM SNP 0033.scaffold00127 754462 1 A T - ReadM SNP 0033.scaffold00127 754524 1 A T - ReadM SNP 0033.scaffold00127 754537 1 A G - ReadM INDEL 0033.scaffold00127 754652 1 T . - ReadM SNP 0033.scaffold00127 754709 1 A G - ReadM SNP 0033.scaffold00127 754738 1 G A - ReadM SNP 0033.scaffold00127 756016 1 G A - ReadM SNP 0033.scaffold00127 756170 1 C T - ReadM SNP 0033.scaffold00127 756491 1 T G - ScafM SNP 0033.scaffold00127 756528 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 756536 1 T . scaffold3621 Both SNP 0033.scaffold00127 756557 1 C T scaffold3621 Both SNP 0033.scaffold00127 756686 1 T C scaffold3621 Both SNP 0033.scaffold00127 756770 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 756799 1 A G - ReadM SNP 0033.scaffold00127 756822 1 T A - ReadM SNP 0033.scaffold00127 756912 1 A G - ReadM SNP 0033.scaffold00127 757129 1 A G - ReadM SNP 0033.scaffold00127 757210 1 G A - ReadM SNP 0033.scaffold00127 757390 1 G C - ReadM SNP 0033.scaffold00127 757461 1 A G - ReadM SNP 0033.scaffold00127 757488 1 G A - ReadM SNP 0033.scaffold00127 757492 1 A C - ReadM SNP 0033.scaffold00127 757808 1 A G - ReadM SNP 0033.scaffold00127 757843 1 A G - ReadM SNP 0033.scaffold00127 757927 1 A G - ReadM SNP 0033.scaffold00127 758256 1 A G - ReadM SNP 0033.scaffold00127 758262 1 C T - ReadM SNP 0033.scaffold00127 758403 1 T C - ReadM SNP 0033.scaffold00127 758603 1 T C - ReadM SNP 0033.scaffold00127 758686 1 T G - ReadM SNP 0033.scaffold00127 758979 1 T C - ReadM SNP 0033.scaffold00127 759009 1 T C - ReadM SNP 0033.scaffold00127 759018 1 T A - ReadM SNP 0033.scaffold00127 759063 1 A G - ReadM SNP 0033.scaffold00127 759462 1 G T - ReadM SNP 0033.scaffold00127 759492 1 T A - ReadM SNP 0033.scaffold00127 759556 1 C T - ReadM SNP 0033.scaffold00127 759677 1 G A - ReadM SNP 0033.scaffold00127 759707 1 A G - ReadM SNP 0033.scaffold00127 760294 1 A T - ReadM SNP 0033.scaffold00127 760332 1 A G - ReadM INDEL 0033.scaffold00127 760469 1 . A - ReadM SNP 0033.scaffold00127 760481 1 G A - ReadM SNP 0033.scaffold00127 760712 1 G T - ReadM SNP 0033.scaffold00127 760714 1 C T - ReadM SNP 0033.scaffold00127 760811 1 A G - ReadM INDEL 0033.scaffold00127 760886 3 ... ATT - ReadM SNP 0033.scaffold00127 761093 1 A G - ReadM SNP 0033.scaffold00127 761152 1 A G - ReadM SNP 0033.scaffold00127 761219 1 T C - ScafM INDEL 0033.scaffold00127 761254 3 ... GTA scaffold3621 ScafM SNP 0033.scaffold00127 761328 2 GT AG scaffold3621 ScafM SNP 0033.scaffold00127 761332 1 C T scaffold3621 Both SNP 0033.scaffold00127 761524 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 761561 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 761584 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 761586 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 761625 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 761628 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 761713 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 761757 4 AAAA .... scaffold3621 ScafM SNP 0033.scaffold00127 761836 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 762004 2 .. AT scaffold3621 ReadM SNP 0033.scaffold00127 762294 1 C T - ReadM SNP 0033.scaffold00127 762326 1 A C - Both SNP 0033.scaffold00127 762378 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 762622 1 T C - ReadM SNP 0033.scaffold00127 762757 1 A G - ReadM SNP 0033.scaffold00127 762773 1 A G - ReadM INDEL 0033.scaffold00127 762780 1 . A - ReadM SNP 0033.scaffold00127 762855 1 C T - ReadM SNP 0033.scaffold00127 762976 1 A T - ReadM SNP 0033.scaffold00127 762981 1 T A - ReadM SNP 0033.scaffold00127 762989 1 A G - Both SNP 0033.scaffold00127 763085 1 C T scaffold3621 Both SNP 0033.scaffold00127 763139 1 A G scaffold3621 Both SNP 0033.scaffold00127 763188 1 C A scaffold3621 ReadM SNP 0033.scaffold00127 763301 1 C T - ReadM SNP 0033.scaffold00127 764365 1 C A - ReadM SNP 0033.scaffold00127 765033 1 G T - ReadM SNP 0033.scaffold00127 765069 1 C T - ReadM SNP 0033.scaffold00127 765214 1 G T - ReadM SNP 0033.scaffold00127 765534 1 A G - ReadM SNP 0033.scaffold00127 765603 1 A C - ReadM INDEL 0033.scaffold00127 765610 2 AA .. - ReadM SNP 0033.scaffold00127 765755 1 A T - ReadM SNP 0033.scaffold00127 765804 1 A C - Both SNP 0033.scaffold00127 766029 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 766808 1 G A - ReadM SNP 0033.scaffold00127 766881 1 A C - ReadM SNP 0033.scaffold00127 767125 1 C G - ReadM SNP 0033.scaffold00127 767242 1 C T - ReadM SNP 0033.scaffold00127 767354 1 G A - ReadM SNP 0033.scaffold00127 767863 1 T C - ReadM SNP 0033.scaffold00127 768113 1 A G - ReadM SNP 0033.scaffold00127 768138 1 T C - ReadM SNP 0033.scaffold00127 768225 1 G A - ReadM SNP 0033.scaffold00127 768343 1 T C - ReadM SNP 0033.scaffold00127 768359 1 C A - ReadM SNP 0033.scaffold00127 768367 1 T A - ReadM SNP 0033.scaffold00127 768434 1 T G - ReadM SNP 0033.scaffold00127 768469 1 G A - ReadM SNP 0033.scaffold00127 768489 1 T C - ReadM SNP 0033.scaffold00127 768602 1 G A - ReadM SNP 0033.scaffold00127 768924 1 G T - ReadM SNP 0033.scaffold00127 769030 1 A G - ReadM SNP 0033.scaffold00127 769046 1 G A - ReadM SNP 0033.scaffold00127 769096 1 C T - ReadM SNP 0033.scaffold00127 769200 1 A T - ReadM SNP 0033.scaffold00127 769244 1 G A - ReadM SNP 0033.scaffold00127 769335 1 G A - ReadM SNP 0033.scaffold00127 769927 1 A G - ReadM SNP 0033.scaffold00127 769934 1 T G - ReadM SNP 0033.scaffold00127 769958 1 G A - ScafM SNP 0033.scaffold00127 769989 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 769994 4 AAAA .... scaffold3621 Both SNP 0033.scaffold00127 770055 1 C T scaffold3621 Both SNP 0033.scaffold00127 770087 1 A T scaffold3621 Both SNP 0033.scaffold00127 770269 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 770308 2 CG AC scaffold3621 Both SNP 0033.scaffold00127 770845 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 770869 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 770916 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 770918 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 770942 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 770944 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 770955 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 770957 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 770981 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 770991 1 T G - ScafM SNP 0033.scaffold00127 771000 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 771005 1 G T scaffold3621 Both SNP 0033.scaffold00127 771034 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 771101 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 771116 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 771140 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 771147 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 771156 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 771161 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 771184 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 771226 78 .............................................................................. CTGAAAGGATGAGAAACAGGCTGAGGACACGGTGCATTCCCGGAAGAATTATCCACAGGCTGAGGACACAGTGCATGC scaffold3621 Both SNP 0033.scaffold00127 771247 1 T C scaffold3621 Both SNP 0033.scaffold00127 771639 1 C T scaffold3621 Both SNP 0033.scaffold00127 771903 1 A C scaffold3621 Both SNP 0033.scaffold00127 772333 1 C T scaffold3621 Both SNP 0033.scaffold00127 772412 1 G A scaffold3621 Both SNP 0033.scaffold00127 772525 1 G A scaffold3621 Both SNP 0033.scaffold00127 772537 1 A C scaffold3621 Both SNP 0033.scaffold00127 773122 1 C A scaffold3621 Both SNP 0033.scaffold00127 773211 1 C T scaffold3621 Both SNP 0033.scaffold00127 773217 1 G A scaffold3621 Both SNP 0033.scaffold00127 773273 1 T C scaffold3621 Both INDEL 0033.scaffold00127 773293 1 . T scaffold3621 Both SNP 0033.scaffold00127 773370 1 T A scaffold3621 Both SNP 0033.scaffold00127 773445 1 T C scaffold3621 Both SNP 0033.scaffold00127 773637 1 T C scaffold3621 Both SNP 0033.scaffold00127 773712 1 A C scaffold3621 Both SNP 0033.scaffold00127 774014 1 C T scaffold3621 Both SNP 0033.scaffold00127 774112 1 T C scaffold3621 Both SNP 0033.scaffold00127 774272 1 G C scaffold3621 Both SNP 0033.scaffold00127 774350 1 T A scaffold3621 Both SNP 0033.scaffold00127 774499 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 774887 1 C T - Both SNP 0033.scaffold00127 775296 1 G A scaffold3621 Both SNP 0033.scaffold00127 775548 1 T C scaffold3621 Both SNP 0033.scaffold00127 775757 1 C T scaffold3621 Both SNP 0033.scaffold00127 775777 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 775805 15 ............... TAGCTCTGAACTTGC scaffold3621 ScafM SNP 0033.scaffold00127 775831 1 C A scaffold3621 ScafM INDEL 0033.scaffold00127 775862 3 AGA ... scaffold3621 ScafM SNP 0033.scaffold00127 775880 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 775918 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 775923 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 775938 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 775944 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 775980 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 776006 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 776013 2 .. GA scaffold3621 ScafM INDEL 0033.scaffold00127 776017 2 .. CT scaffold3621 ScafM INDEL 0033.scaffold00127 776028 1 . C scaffold3621 ScafM INDEL 0033.scaffold00127 776059 34 CTCAAAACAATAGAAACGACCAATTTACCAAATG .................................. scaffold3621 ScafM INDEL 0033.scaffold00127 776094 1 C . scaffold3621 ScafM SNP 0033.scaffold00127 776108 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 776259 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 776282 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 776315 4 TTTT .... scaffold3621 Both SNP 0033.scaffold00127 776510 1 T C scaffold3621 Both SNP 0033.scaffold00127 776664 1 A C scaffold3621 Both SNP 0033.scaffold00127 776684 1 G C scaffold3621 Both SNP 0033.scaffold00127 776728 1 C T scaffold3621 Both SNP 0033.scaffold00127 776805 1 G A scaffold3621 Both SNP 0033.scaffold00127 776828 1 G A scaffold3621 Both SNP 0033.scaffold00127 776851 1 C T scaffold3621 Both SNP 0033.scaffold00127 776886 1 A G scaffold3621 Both SNP 0033.scaffold00127 777085 1 C T scaffold3621 Both SNP 0033.scaffold00127 777252 1 C T scaffold3621 Both SNP 0033.scaffold00127 777331 1 G T scaffold3621 Both SNP 0033.scaffold00127 777378 1 C T scaffold3621 Both SNP 0033.scaffold00127 777390 1 G A scaffold3621 Both SNP 0033.scaffold00127 777456 1 T C scaffold3621 Both SNP 0033.scaffold00127 777535 1 A G scaffold3621 Both SNP 0033.scaffold00127 777537 1 A C scaffold3621 Both SNP 0033.scaffold00127 777587 1 A G scaffold3621 Both SNP 0033.scaffold00127 777654 1 A T scaffold3621 Both SNP 0033.scaffold00127 777657 1 C T scaffold3621 Both SNP 0033.scaffold00127 777663 1 T A scaffold3621 Both SNP 0033.scaffold00127 777762 1 G T scaffold3621 Both SNP 0033.scaffold00127 777813 1 G C scaffold3621 Both INDEL 0033.scaffold00127 778033 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 778224 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 779734 1 T C - ReadM SNP 0033.scaffold00127 779816 1 G A - ReadM SNP 0033.scaffold00127 779934 1 C A - ReadM SNP 0033.scaffold00127 780366 1 A G - ReadM SNP 0033.scaffold00127 780688 1 C T - ReadM SNP 0033.scaffold00127 780853 1 A C - ReadM SNP 0033.scaffold00127 780927 1 G A - Both SNP 0033.scaffold00127 781299 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 781783 1 G A - ReadM SNP 0033.scaffold00127 781848 1 A G - ReadM SNP 0033.scaffold00127 781885 1 A G - ReadM SNP 0033.scaffold00127 781952 1 T C - ReadM SNP 0033.scaffold00127 782014 1 C T - ReadM SNP 0033.scaffold00127 782435 1 G A - ScafM SNP 0033.scaffold00127 782548 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 782935 1 G C - Both SNP 0033.scaffold00127 782972 1 G C scaffold3621 Both SNP 0033.scaffold00127 782974 1 G A scaffold3621 Both SNP 0033.scaffold00127 783005 1 C A scaffold3621 Both SNP 0033.scaffold00127 783211 1 C G scaffold3621 ReadM SNP 0033.scaffold00127 783466 1 C A - ReadM SNP 0033.scaffold00127 783541 1 A C - ReadM SNP 0033.scaffold00127 783569 1 T G - ReadM INDEL 0033.scaffold00127 783683 1 . A - ReadM SNP 0033.scaffold00127 783948 1 A G - ReadM SNP 0033.scaffold00127 784043 1 G T - Both SNP 0033.scaffold00127 784170 1 C T scaffold3621 Both SNP 0033.scaffold00127 784333 1 G A scaffold3621 Both SNP 0033.scaffold00127 784383 1 T G scaffold3621 Both INDEL 0033.scaffold00127 784400 1 A . scaffold3621 Both SNP 0033.scaffold00127 784411 1 A G scaffold3621 Both INDEL 0033.scaffold00127 784507 2 .. AG scaffold3621 Both SNP 0033.scaffold00127 784573 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 784630 10 .......... ATAACAAACT scaffold3621 ScafM SNP 0033.scaffold00127 784632 1 G A scaffold3621 Both SNP 0033.scaffold00127 784715 1 A G scaffold3621 Both SNP 0033.scaffold00127 784721 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 785220 1 T A - ReadM SNP 0033.scaffold00127 786005 1 G A - Both SNP 0033.scaffold00127 786263 1 C T scaffold3621 Both INDEL 0033.scaffold00127 786394 1 C . scaffold3621 Both SNP 0033.scaffold00127 786464 1 T C scaffold3621 Both SNP 0033.scaffold00127 786485 1 G C scaffold3621 Both SNP 0033.scaffold00127 786546 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 786857 1 A G - ReadM SNP 0033.scaffold00127 786897 1 G T - ReadM SNP 0033.scaffold00127 787016 1 T C - ReadM SNP 0033.scaffold00127 787132 1 G A - ReadM INDEL 0033.scaffold00127 787145 2 CT .. - Both SNP 0033.scaffold00127 787310 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 787421 1 A G - ReadM SNP 0033.scaffold00127 787493 1 G A - ReadM SNP 0033.scaffold00127 787522 1 T C - ReadM SNP 0033.scaffold00127 787717 1 A G - ReadM SNP 0033.scaffold00127 787861 1 A C - ReadM SNP 0033.scaffold00127 787867 1 T C - ReadM SNP 0033.scaffold00127 788128 1 G C - ReadM SNP 0033.scaffold00127 788414 1 G A - ReadM SNP 0033.scaffold00127 788606 1 A G - ReadM SNP 0033.scaffold00127 788716 1 A T - ReadM SNP 0033.scaffold00127 788963 1 A T - ReadM SNP 0033.scaffold00127 788994 1 A C - ReadM SNP 0033.scaffold00127 789015 1 A G - ReadM SNP 0033.scaffold00127 789053 1 G A - ReadM INDEL 0033.scaffold00127 789381 2 .. AA - ReadM SNP 0033.scaffold00127 789545 1 A G - ReadM SNP 0033.scaffold00127 789735 1 T C - ReadM SNP 0033.scaffold00127 789747 1 C G - ReadM SNP 0033.scaffold00127 789749 1 C T - ReadM SNP 0033.scaffold00127 789835 1 G A - ReadM SNP 0033.scaffold00127 789882 1 A G - ReadM SNP 0033.scaffold00127 789941 1 A T - ReadM SNP 0033.scaffold00127 790162 1 C T - ReadM SNP 0033.scaffold00127 790352 1 C G - ReadM SNP 0033.scaffold00127 790451 1 C T - ReadM SNP 0033.scaffold00127 790471 1 A C - ReadM SNP 0033.scaffold00127 790718 1 G A - ReadM SNP 0033.scaffold00127 790829 1 A G - ReadM SNP 0033.scaffold00127 792653 1 G C - ReadM SNP 0033.scaffold00127 792656 1 G C - ReadM INDEL 0033.scaffold00127 792783 1 C . - ReadM SNP 0033.scaffold00127 792829 1 T G - ReadM SNP 0033.scaffold00127 792899 1 A C - ReadM SNP 0033.scaffold00127 793172 1 A G - ReadM SNP 0033.scaffold00127 793654 1 C T - ReadM INDEL 0033.scaffold00127 793877 3 ... AAT - ReadM SNP 0033.scaffold00127 793937 1 T C - ReadM SNP 0033.scaffold00127 793954 1 T C - ReadM SNP 0033.scaffold00127 794445 1 G T - ReadM SNP 0033.scaffold00127 794565 1 A G - ReadM SNP 0033.scaffold00127 794570 1 G A - ReadM SNP 0033.scaffold00127 794785 1 T A - ReadM SNP 0033.scaffold00127 795473 1 G A - ReadM SNP 0033.scaffold00127 795489 1 A G - ScafM SNP 0033.scaffold00127 796653 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 796664 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 796666 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 796730 3 ACA ... scaffold3621 ScafM SNP 0033.scaffold00127 796871 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 796931 2 CA .. scaffold3621 ScafM SNP 0033.scaffold00127 796950 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 796963 2 CA TT scaffold3621 Both SNP 0033.scaffold00127 797120 1 T C scaffold3621 Both SNP 0033.scaffold00127 797141 1 G A scaffold3621 Both SNP 0033.scaffold00127 797312 1 A G scaffold3621 Both SNP 0033.scaffold00127 797333 1 A G scaffold3621 Both SNP 0033.scaffold00127 797340 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 797391 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 797482 2 AA GG scaffold3621 ScafM SNP 0033.scaffold00127 797556 2 CA TG scaffold3621 ScafM SNP 0033.scaffold00127 797582 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 797591 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 797671 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 797680 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 798694 1 C A - ReadM SNP 0033.scaffold00127 798728 1 T C - ReadM SNP 0033.scaffold00127 798804 1 C T - ReadM INDEL 0033.scaffold00127 799452 1 G . - ReadM SNP 0033.scaffold00127 799459 1 A C - ReadM SNP 0033.scaffold00127 799513 1 T G - ReadM SNP 0033.scaffold00127 799544 1 T C - ReadM SNP 0033.scaffold00127 799582 1 C T - ReadM SNP 0033.scaffold00127 799963 1 A T - ReadM SNP 0033.scaffold00127 800031 1 A G - ScafM SNP 0033.scaffold00127 802223 1 G T scaffold1812 ScafM SNP 0033.scaffold00127 802285 1 G A scaffold1812 ScafM SNP 0033.scaffold00127 802292 1 A G scaffold1812 ScafM SNP 0033.scaffold00127 802335 1 T C scaffold1812 ScafM SNP 0033.scaffold00127 802337 1 C A scaffold1812 ScafM SNP 0033.scaffold00127 804287 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 804437 5 AAAGA ..... scaffold3621 ScafM SNP 0033.scaffold00127 804482 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 804530 1 A G scaffold3621 Both SNP 0033.scaffold00127 804534 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 804846 1 C T scaffold3621 Both SNP 0033.scaffold00127 804886 1 T C scaffold3621 Both SNP 0033.scaffold00127 804976 1 C G scaffold3621 ScafM INDEL 0033.scaffold00127 805043 5 ..... ATTTA scaffold3621 ScafM INDEL 0033.scaffold00127 805044 3 ... GCC scaffold3621 ScafM SNP 0033.scaffold00127 805076 1 T G scaffold3621 ScafM INDEL 0033.scaffold00127 805088 1 C . scaffold3621 ScafM SNP 0033.scaffold00127 805100 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 805135 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 805149 1 G T scaffold3621 ScafM INDEL 0033.scaffold00127 805191 1 T . scaffold3621 ScafM INDEL 0033.scaffold00127 805194 7 TTGCCTT ....... scaffold3621 ScafM SNP 0033.scaffold00127 805207 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 805218 1 C G scaffold3621 ScafM INDEL 0033.scaffold00127 805223 3 ... TTA scaffold3621 ScafM SNP 0033.scaffold00127 805230 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 805256 2 TA .. scaffold3621 ScafM SNP 0033.scaffold00127 805271 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 805293 1 G T scaffold3621 ScafM INDEL 0033.scaffold00127 805301 3 ... ATA scaffold3621 ScafM INDEL 0033.scaffold00127 805317 3 ATT ... scaffold3621 ScafM SNP 0033.scaffold00127 805330 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 805332 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 805351 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 805368 2 CA .. scaffold3621 ScafM SNP 0033.scaffold00127 805376 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 805392 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 805403 2 TA CG scaffold3621 ScafM SNP 0033.scaffold00127 805431 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 805437 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 805440 5 ..... ATTCA scaffold3621 ScafM SNP 0033.scaffold00127 805463 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 805469 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 805472 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 805481 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 805484 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 805487 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 805492 2 AA GC scaffold3621 ScafM SNP 0033.scaffold00127 805513 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 805525 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 805527 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 805529 2 GC TT scaffold3621 ScafM SNP 0033.scaffold00127 805532 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 805548 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 805557 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 805570 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 805572 2 TT .. scaffold3621 ScafM SNP 0033.scaffold00127 805578 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 805581 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 805583 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 827720 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 827726 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 827741 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 827786 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 827788 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 827800 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 827850 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 827899 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 827909 1 . T scaffold3621 Both SNP 0033.scaffold00127 827942 1 A G scaffold3621 Both SNP 0033.scaffold00127 827972 1 G C scaffold3621 Both SNP 0033.scaffold00127 828042 1 C A scaffold3621 Both SNP 0033.scaffold00127 828146 1 A G scaffold3621 Both SNP 0033.scaffold00127 828445 1 A G scaffold3621 Both SNP 0033.scaffold00127 828451 1 G A scaffold3621 Both SNP 0033.scaffold00127 828490 1 T C scaffold3621 Both INDEL 0033.scaffold00127 828553 2 GG .. scaffold3621 Both SNP 0033.scaffold00127 828592 1 C T scaffold3621 Both SNP 0033.scaffold00127 828608 1 G T scaffold3621 Both SNP 0033.scaffold00127 828636 1 G C scaffold3621 ReadM SNP 0033.scaffold00127 828728 1 A G - ReadM SNP 0033.scaffold00127 828884 1 T C - ReadM SNP 0033.scaffold00127 828959 1 C G - ReadM SNP 0033.scaffold00127 829159 1 A G - ScafM SNP 0033.scaffold00127 829390 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 834600 1 T C - ScafM SNP 0033.scaffold00127 836329 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 836342 1 C G scaffold3621 Both SNP 0033.scaffold00127 836486 1 A G scaffold3621 Both SNP 0033.scaffold00127 836611 1 G A scaffold3621 Both SNP 0033.scaffold00127 836646 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 836679 3 TCT ... scaffold3621 Both SNP 0033.scaffold00127 836714 1 G A scaffold3621 Both SNP 0033.scaffold00127 836745 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 836802 1 C T - ReadM SNP 0033.scaffold00127 836829 1 G C - ReadM SNP 0033.scaffold00127 836916 1 A G - ReadM SNP 0033.scaffold00127 836962 1 C T - ReadM SNP 0033.scaffold00127 837056 1 A G - Both SNP 0033.scaffold00127 837122 1 C G scaffold3621 Both SNP 0033.scaffold00127 837197 1 T C scaffold3621 Both SNP 0033.scaffold00127 837341 1 A G scaffold3621 Both SNP 0033.scaffold00127 837630 1 T C scaffold3621 Both INDEL 0033.scaffold00127 837717 1 T . scaffold3621 Both SNP 0033.scaffold00127 837793 1 C T scaffold3621 Both SNP 0033.scaffold00127 838109 1 G A scaffold3621 Both SNP 0033.scaffold00127 838553 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 838598 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 838600 1 A T scaffold3621 ReadM INDEL 0033.scaffold00127 838883 1 . T - ReadM SNP 0033.scaffold00127 838973 1 T C - ReadM SNP 0033.scaffold00127 838997 1 A C - Both SNP 0033.scaffold00127 839088 1 C T scaffold3621 Both SNP 0033.scaffold00127 839134 1 G A scaffold3621 Both SNP 0033.scaffold00127 839287 1 T C scaffold3621 Both SNP 0033.scaffold00127 839318 1 T C scaffold3621 Both SNP 0033.scaffold00127 839522 1 G A scaffold3621 Both SNP 0033.scaffold00127 839776 1 C T scaffold3621 Both SNP 0033.scaffold00127 839791 1 A T scaffold3621 Both SNP 0033.scaffold00127 839886 1 G T scaffold3621 Both INDEL 0033.scaffold00127 840082 2 AA .. scaffold3621 ReadM SNP 0033.scaffold00127 840214 1 C T - ReadM SNP 0033.scaffold00127 840386 1 C T - ReadM SNP 0033.scaffold00127 840416 1 C T - ScafM SNP 0033.scaffold00127 840463 1 A C scaffold3621 Both SNP 0033.scaffold00127 840503 1 A G scaffold3621 Both SNP 0033.scaffold00127 840511 1 A G scaffold3621 Both INDEL 0033.scaffold00127 840521 1 A . scaffold3621 Both SNP 0033.scaffold00127 840618 1 G C scaffold3621 ReadM SNP 0033.scaffold00127 840649 1 G A - ReadM SNP 0033.scaffold00127 840676 1 A G - Both SNP 0033.scaffold00127 841192 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 841199 1 G A scaffold3621 Both INDEL 0033.scaffold00127 841202 1 . T scaffold3621 Both SNP 0033.scaffold00127 841247 1 G A scaffold3621 Both SNP 0033.scaffold00127 841266 1 C A scaffold3621 Both INDEL 0033.scaffold00127 841428 3 AAG ... scaffold3621 Both INDEL 0033.scaffold00127 841491 1 T . scaffold3621 Both SNP 0033.scaffold00127 841522 1 T C scaffold3621 Both SNP 0033.scaffold00127 841616 1 T C scaffold3621 Both SNP 0033.scaffold00127 841749 1 G A scaffold3621 Both SNP 0033.scaffold00127 841977 1 C T scaffold3621 Both SNP 0033.scaffold00127 841984 1 T C scaffold3621 Both SNP 0033.scaffold00127 842011 1 C T scaffold3621 Both SNP 0033.scaffold00127 842231 1 A T scaffold3621 Both SNP 0033.scaffold00127 842333 1 C A scaffold3621 ScafM INDEL 0033.scaffold00127 842466 1 G . scaffold3621 ScafM INDEL 0033.scaffold00127 842469 1 T . scaffold3621 Both SNP 0033.scaffold00127 842484 1 A G scaffold3621 Both SNP 0033.scaffold00127 842749 1 T C scaffold3621 Both SNP 0033.scaffold00127 842822 1 G A scaffold3621 Both SNP 0033.scaffold00127 842928 1 C G scaffold3621 ReadM SNP 0033.scaffold00127 843125 1 G A - ReadM SNP 0033.scaffold00127 843290 1 T A - ReadM SNP 0033.scaffold00127 843313 1 T A - ScafM SNP 0033.scaffold00127 843332 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 843337 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 843346 1 T C scaffold3621 Both SNP 0033.scaffold00127 843355 1 C A scaffold3621 Both SNP 0033.scaffold00127 843511 1 G A scaffold3621 Both SNP 0033.scaffold00127 843636 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 843701 1 C A - ReadM SNP 0033.scaffold00127 843758 1 G C - ReadM SNP 0033.scaffold00127 843856 1 C A - Both SNP 0033.scaffold00127 844053 1 G A scaffold3621 Both SNP 0033.scaffold00127 844086 1 G T scaffold3621 Both SNP 0033.scaffold00127 844167 1 T A scaffold3621 Both SNP 0033.scaffold00127 844274 1 T A scaffold3621 Both SNP 0033.scaffold00127 844675 1 C T scaffold3621 Both SNP 0033.scaffold00127 844914 1 G A scaffold3621 Both SNP 0033.scaffold00127 845006 1 C A scaffold3621 Both SNP 0033.scaffold00127 845146 1 C T scaffold3621 Both SNP 0033.scaffold00127 845417 1 A T scaffold3621 Both SNP 0033.scaffold00127 845585 1 G A scaffold3621 Both SNP 0033.scaffold00127 845677 1 T C scaffold3621 Both SNP 0033.scaffold00127 845715 1 G C scaffold3621 Both SNP 0033.scaffold00127 845827 1 G A scaffold3621 Both SNP 0033.scaffold00127 845836 1 C G scaffold3621 Both SNP 0033.scaffold00127 845875 1 A G scaffold3621 Both SNP 0033.scaffold00127 845891 1 T A scaffold3621 Both SNP 0033.scaffold00127 845989 1 A T scaffold3621 Both SNP 0033.scaffold00127 846097 1 C T scaffold3621 Both SNP 0033.scaffold00127 846109 1 T A scaffold3621 Both SNP 0033.scaffold00127 846445 1 C T scaffold3621 Both SNP 0033.scaffold00127 846498 1 C T scaffold3621 Both INDEL 0033.scaffold00127 846616 3 CTT ... scaffold3621 Both SNP 0033.scaffold00127 846679 1 C T scaffold3621 Both SNP 0033.scaffold00127 846781 1 A C scaffold3621 Both SNP 0033.scaffold00127 846860 1 C T scaffold3621 Both SNP 0033.scaffold00127 846910 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 846944 1 A G scaffold3621 Both SNP 0033.scaffold00127 847223 1 T A scaffold3621 Both INDEL 0033.scaffold00127 847370 3 TTG ... scaffold3621 ScafM INDEL 0033.scaffold00127 847423 6 AAAGAA ...... scaffold3621 ScafM INDEL 0033.scaffold00127 847471 22 TGTGTAAAAGTTGAAAACGATC ...................... scaffold3621 ScafM SNP 0033.scaffold00127 847499 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 847520 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 847522 1 T G scaffold3621 ScafM INDEL 0033.scaffold00127 847538 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 847618 2 TC AA scaffold3621 Both SNP 0033.scaffold00127 847628 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 847721 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 847780 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 847829 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 847834 2 TT CA scaffold3621 ScafM SNP 0033.scaffold00127 847849 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 847957 1 A G - ReadM SNP 0033.scaffold00127 847998 1 A G - ReadM SNP 0033.scaffold00127 848117 1 C T - Both SNP 0033.scaffold00127 848362 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 848396 2 .. TT scaffold3621 ScafM SNP 0033.scaffold00127 848402 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 848654 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 848664 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 848668 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 848671 6 AAAAAA TTTTTT scaffold3621 ScafM SNP 0033.scaffold00127 848684 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 848700 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 848763 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 848765 1 C A scaffold3621 ReadM SNP 0033.scaffold00127 849887 1 A G - ReadM SNP 0033.scaffold00127 849912 1 A C - ReadM SNP 0033.scaffold00127 849950 1 C A - ReadM INDEL 0033.scaffold00127 850014 1 C . - ReadM SNP 0033.scaffold00127 850119 1 T G - Both SNP 0033.scaffold00127 850467 1 G T scaffold3621 Both SNP 0033.scaffold00127 850502 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 850556 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 850603 2 AA .. scaffold3621 ScafM SNP 0033.scaffold00127 850617 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 850629 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 850658 1 . T scaffold3621 ReadM SNP 0033.scaffold00127 850703 1 A C - ReadM SNP 0033.scaffold00127 850715 1 A G - ReadM SNP 0033.scaffold00127 850781 1 C A - Both SNP 0033.scaffold00127 850800 1 C T scaffold3621 Both SNP 0033.scaffold00127 850833 1 G A scaffold3621 Both INDEL 0033.scaffold00127 850894 1 . T scaffold3621 Both SNP 0033.scaffold00127 850918 1 A T scaffold3621 ReadM SNP 0033.scaffold00127 851233 1 G A - ReadM SNP 0033.scaffold00127 851871 1 T G - ReadM SNP 0033.scaffold00127 851875 1 G A - ReadM SNP 0033.scaffold00127 851885 1 T G - ReadM SNP 0033.scaffold00127 852119 1 A C - ReadM SNP 0033.scaffold00127 852421 1 A C - ReadM SNP 0033.scaffold00127 852444 1 T C - ReadM SNP 0033.scaffold00127 852459 1 A T - ScafM SNP 0033.scaffold00127 852651 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 852655 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 852660 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 852669 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 852673 3 CTA ... scaffold3621 ScafM SNP 0033.scaffold00127 852708 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 852733 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 852736 1 A G scaffold3621 Both SNP 0033.scaffold00127 852775 1 G A scaffold3621 Both SNP 0033.scaffold00127 852806 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 852850 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 852860 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 852886 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 852894 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 852922 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 852931 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 852957 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 853297 1 C T - ReadM SNP 0033.scaffold00127 853699 1 A G - ReadM INDEL 0033.scaffold00127 853711 1 T . - ReadM SNP 0033.scaffold00127 853729 1 A G - ScafM INDEL 0033.scaffold00127 853916 8 CATTTCAA ........ scaffold3621 Both SNP 0033.scaffold00127 853994 1 C T scaffold3621 Both INDEL 0033.scaffold00127 854008 1 . C scaffold3621 Both SNP 0033.scaffold00127 854017 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 854070 2 TA CT scaffold3621 Both SNP 0033.scaffold00127 854087 1 A G scaffold3621 Both SNP 0033.scaffold00127 854211 1 C T scaffold3621 Both SNP 0033.scaffold00127 854243 1 C G scaffold3621 Both SNP 0033.scaffold00127 854374 1 C A scaffold3621 Both SNP 0033.scaffold00127 854378 1 G A scaffold3621 Both SNP 0033.scaffold00127 854409 1 G T scaffold3621 Both SNP 0033.scaffold00127 855177 1 G A scaffold3621 Both SNP 0033.scaffold00127 855179 1 G A scaffold3621 Both SNP 0033.scaffold00127 855302 1 C T scaffold3621 Both SNP 0033.scaffold00127 855772 1 A G scaffold3621 Both SNP 0033.scaffold00127 856472 1 A G scaffold3621 Both SNP 0033.scaffold00127 856615 1 C T scaffold3621 Both SNP 0033.scaffold00127 856667 1 G T scaffold3621 Both SNP 0033.scaffold00127 856833 1 T C scaffold3621 Both SNP 0033.scaffold00127 856870 1 G C scaffold3621 Both SNP 0033.scaffold00127 856915 1 A T scaffold3621 Both SNP 0033.scaffold00127 857153 1 G T scaffold3621 ReadM SNP 0033.scaffold00127 857320 1 C A - ReadM SNP 0033.scaffold00127 857367 1 A G - ScafM INDEL 0033.scaffold00127 857659 6 GAAGTT ...... scaffold3621 ScafM SNP 0033.scaffold00127 857675 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 857686 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 857691 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 857760 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 857786 3 AAT ... scaffold3621 ScafM INDEL 0033.scaffold00127 857897 10 .......... CTAGATTATC scaffold3621 ScafM SNP 0033.scaffold00127 857922 3 CAC TTA scaffold3621 ScafM INDEL 0033.scaffold00127 858051 2 .. GG scaffold3621 ScafM SNP 0033.scaffold00127 858054 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 858075 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 871285 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 871365 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 871964 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 872065 6 TTTTTG ...... scaffold3621 ScafM SNP 0033.scaffold00127 872086 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 872104 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 872444 1 C A - ReadM SNP 0033.scaffold00127 872463 1 T C - ReadM SNP 0033.scaffold00127 872517 1 A T - ReadM SNP 0033.scaffold00127 872574 1 A T - ReadM SNP 0033.scaffold00127 872633 1 A G - ReadM SNP 0033.scaffold00127 872679 1 A G - ScafM SNP 0033.scaffold00127 872750 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 872776 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 872788 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 872802 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 872923 1 G A - ReadM SNP 0033.scaffold00127 873004 1 A G - ReadM SNP 0033.scaffold00127 873074 1 G A - ReadM SNP 0033.scaffold00127 873116 1 A C - ReadM SNP 0033.scaffold00127 873130 1 A T - ScafM SNP 0033.scaffold00127 873666 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 873669 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 873681 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 873705 1 G T scaffold3621 ReadM SNP 0033.scaffold00127 873828 1 C T - ScafM SNP 0033.scaffold00127 877347 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 877349 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 877913 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 877923 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 878020 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 878158 1 G C - ReadM SNP 0033.scaffold00127 878175 1 C T - Both SNP 0033.scaffold00127 878331 1 T C scaffold3621 Both SNP 0033.scaffold00127 878376 1 G T scaffold3621 Both SNP 0033.scaffold00127 878509 1 A G scaffold3621 Both SNP 0033.scaffold00127 878549 1 C A scaffold3621 Both INDEL 0033.scaffold00127 878566 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 878602 1 A G scaffold3621 Both SNP 0033.scaffold00127 878610 1 A T scaffold3621 Both INDEL 0033.scaffold00127 878620 1 G . scaffold3621 Both SNP 0033.scaffold00127 878698 1 G A scaffold3621 Both INDEL 0033.scaffold00127 878744 1 . T scaffold3621 ReadM SNP 0033.scaffold00127 878908 1 A C - ReadM SNP 0033.scaffold00127 878949 1 T C - ReadM SNP 0033.scaffold00127 879121 1 G A - ReadM SNP 0033.scaffold00127 879135 1 C T - ReadM SNP 0033.scaffold00127 879142 1 T C - ReadM SNP 0033.scaffold00127 879322 1 A G - ReadM SNP 0033.scaffold00127 879380 1 T C - Both SNP 0033.scaffold00127 879719 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 879836 1 G T - ReadM SNP 0033.scaffold00127 879958 1 G A - ReadM SNP 0033.scaffold00127 879962 1 C G - ReadM SNP 0033.scaffold00127 880037 1 G A - ReadM INDEL 0033.scaffold00127 880053 1 . T - ReadM SNP 0033.scaffold00127 880142 2 CA TG - ReadM SNP 0033.scaffold00127 880175 1 A G - ReadM SNP 0033.scaffold00127 880690 1 C T - ReadM SNP 0033.scaffold00127 880818 1 G A - ReadM SNP 0033.scaffold00127 880830 1 C T - Both SNP 0033.scaffold00127 880916 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 880967 3 TGC ... scaffold3621 ScafM SNP 0033.scaffold00127 880979 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 881006 1 C A scaffold3621 Both SNP 0033.scaffold00127 881042 1 A G scaffold3621 Both SNP 0033.scaffold00127 881066 1 C A scaffold3621 Both SNP 0033.scaffold00127 881099 1 A G scaffold3621 Both SNP 0033.scaffold00127 881198 1 C A scaffold3621 Both SNP 0033.scaffold00127 881318 1 A G scaffold3621 Both SNP 0033.scaffold00127 881426 1 G A scaffold3621 Both SNP 0033.scaffold00127 881478 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 881556 3 TGT ... scaffold3621 ScafM SNP 0033.scaffold00127 881580 1 A G scaffold3621 Both SNP 0033.scaffold00127 881600 1 A C scaffold3621 Both SNP 0033.scaffold00127 881660 1 A G scaffold3621 Both SNP 0033.scaffold00127 881665 1 C A scaffold3621 Both INDEL 0033.scaffold00127 881688 1 T . scaffold3621 Both SNP 0033.scaffold00127 881831 1 A G scaffold3621 Both SNP 0033.scaffold00127 881913 1 G A scaffold3621 Both SNP 0033.scaffold00127 881962 1 A G scaffold3621 Both SNP 0033.scaffold00127 882190 1 G A scaffold3621 Both SNP 0033.scaffold00127 882227 1 G C scaffold3621 Both SNP 0033.scaffold00127 882358 1 T A scaffold3621 Both SNP 0033.scaffold00127 882532 1 C A scaffold3621 Both SNP 0033.scaffold00127 882795 1 A G scaffold3621 Both INDEL 0033.scaffold00127 882820 1 . T scaffold3621 Both SNP 0033.scaffold00127 882853 1 T C scaffold3621 Both SNP 0033.scaffold00127 882869 1 A G scaffold3621 Both SNP 0033.scaffold00127 882983 1 G A scaffold3621 Both INDEL 0033.scaffold00127 883034 1 . G scaffold3621 Both SNP 0033.scaffold00127 883096 1 G T scaffold3621 Both SNP 0033.scaffold00127 883125 1 T C scaffold3621 Both SNP 0033.scaffold00127 883585 1 T G scaffold3621 ReadM SNP 0033.scaffold00127 883752 1 T C - ReadM SNP 0033.scaffold00127 883754 1 A G - ReadM SNP 0033.scaffold00127 883852 1 C T - Both SNP 0033.scaffold00127 883917 1 G A scaffold3621 Both SNP 0033.scaffold00127 883954 1 T C scaffold3621 Both INDEL 0033.scaffold00127 884026 1 . T scaffold3621 Both INDEL 0033.scaffold00127 884059 1 . T scaffold3621 Both SNP 0033.scaffold00127 884161 1 A G scaffold3621 Both SNP 0033.scaffold00127 884173 1 T C scaffold3621 Both INDEL 0033.scaffold00127 884267 1 . A scaffold3621 Both SNP 0033.scaffold00127 884677 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 884828 12 AAAGTCTCTGGC ............ scaffold3621 ScafM SNP 0033.scaffold00127 884857 1 G A scaffold3621 Both SNP 0033.scaffold00127 884877 1 G T scaffold3621 Both SNP 0033.scaffold00127 884930 1 T C scaffold3621 Both SNP 0033.scaffold00127 885006 1 A G scaffold3621 Both SNP 0033.scaffold00127 885016 1 G A scaffold3621 Both SNP 0033.scaffold00127 885128 1 A G scaffold3621 Both SNP 0033.scaffold00127 885138 1 G T scaffold3621 Both SNP 0033.scaffold00127 885171 1 G T scaffold3621 Both INDEL 0033.scaffold00127 885248 1 . T scaffold3621 ReadM SNP 0033.scaffold00127 885374 1 A C - ReadM SNP 0033.scaffold00127 885387 1 C T - ReadM SNP 0033.scaffold00127 885476 1 A T - ReadM SNP 0033.scaffold00127 885534 1 C T - ReadM SNP 0033.scaffold00127 885616 1 G A - ReadM SNP 0033.scaffold00127 885641 1 C A - ReadM SNP 0033.scaffold00127 885707 1 A G - ReadM SNP 0033.scaffold00127 885723 1 A G - Both SNP 0033.scaffold00127 885914 1 T G scaffold3621 Both SNP 0033.scaffold00127 886128 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 886152 1 A T scaffold3621 Both SNP 0033.scaffold00127 886429 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886513 2 AA GG scaffold3621 Both SNP 0033.scaffold00127 886531 1 T C scaffold3621 Both SNP 0033.scaffold00127 886534 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886714 2 TC CT scaffold3621 ScafM SNP 0033.scaffold00127 886720 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 886727 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 886753 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 886763 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886768 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 886780 2 TG CA scaffold3621 ScafM SNP 0033.scaffold00127 886800 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 886802 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 886816 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886818 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 886823 2 AG CA scaffold3621 ScafM SNP 0033.scaffold00127 886852 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 886855 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886907 3 ACG GTT scaffold3621 ScafM SNP 0033.scaffold00127 886935 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 886938 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 886948 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 886972 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 886975 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 886982 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 886986 4 TCCA CGTC scaffold3621 ScafM SNP 0033.scaffold00127 886991 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 886995 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 887003 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 887029 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 887044 2 CT TC scaffold3621 ScafM SNP 0033.scaffold00127 887051 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 887076 1 C G scaffold3621 Both SNP 0033.scaffold00127 887086 1 A T scaffold3621 Both SNP 0033.scaffold00127 887132 1 G C scaffold3621 Both SNP 0033.scaffold00127 887171 1 G A scaffold3621 Both SNP 0033.scaffold00127 887174 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 887203 2 TG AA scaffold3621 Both SNP 0033.scaffold00127 887253 1 C T scaffold3621 Both SNP 0033.scaffold00127 887337 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 887356 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 887370 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 887374 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 887379 2 TC CT scaffold3621 Both SNP 0033.scaffold00127 887410 1 C T scaffold3621 Both SNP 0033.scaffold00127 887432 1 C T scaffold3621 Both SNP 0033.scaffold00127 887468 1 C T scaffold3621 Both SNP 0033.scaffold00127 887519 1 T C scaffold3621 Both SNP 0033.scaffold00127 887594 1 T C scaffold3621 Both SNP 0033.scaffold00127 887658 1 C A scaffold3621 Both SNP 0033.scaffold00127 887675 1 G A scaffold3621 Both SNP 0033.scaffold00127 887717 1 T A scaffold3621 Both SNP 0033.scaffold00127 887780 1 T C scaffold3621 Both SNP 0033.scaffold00127 887783 1 T C scaffold3621 Both SNP 0033.scaffold00127 887890 1 C A scaffold3621 Both SNP 0033.scaffold00127 887901 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 887917 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 887919 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 887921 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 887932 1 C G scaffold3621 Both SNP 0033.scaffold00127 887944 1 T A scaffold3621 Both SNP 0033.scaffold00127 887957 1 T C scaffold3621 Both SNP 0033.scaffold00127 888020 1 C T scaffold3621 Both SNP 0033.scaffold00127 888051 1 A C scaffold3621 Both SNP 0033.scaffold00127 888072 1 T C scaffold3621 Both SNP 0033.scaffold00127 888153 1 A G scaffold3621 Both SNP 0033.scaffold00127 888179 1 C A scaffold3621 Both SNP 0033.scaffold00127 888194 1 T C scaffold3621 Both SNP 0033.scaffold00127 888288 1 C G scaffold3621 Both SNP 0033.scaffold00127 888305 1 T C scaffold3621 Both SNP 0033.scaffold00127 888341 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888385 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888387 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888391 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 888397 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888480 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888483 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 888496 2 TT AC scaffold3621 ScafM SNP 0033.scaffold00127 888557 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 888573 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 888585 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 888599 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 888601 1 C T scaffold3621 Both SNP 0033.scaffold00127 888689 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 888704 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 888713 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 888722 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 888725 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 888741 1 A C scaffold3621 Both SNP 0033.scaffold00127 888788 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 888800 1 C A scaffold3621 ReadM SNP 0033.scaffold00127 888807 1 T C - ReadM SNP 0033.scaffold00127 888840 1 T C - ReadM SNP 0033.scaffold00127 888930 1 C T - ReadM SNP 0033.scaffold00127 889011 1 C G - ReadM SNP 0033.scaffold00127 889085 1 T C - ReadM SNP 0033.scaffold00127 889091 1 A C - ReadM SNP 0033.scaffold00127 889144 1 C A - ReadM SNP 0033.scaffold00127 889171 1 T C - ReadM SNP 0033.scaffold00127 889251 1 C G - ReadM SNP 0033.scaffold00127 889371 1 C T - ReadM SNP 0033.scaffold00127 889436 1 A T - ReadM SNP 0033.scaffold00127 889461 1 C T - ReadM SNP 0033.scaffold00127 889673 1 C A - ReadM INDEL 0033.scaffold00127 890736 1 A . - ReadM SNP 0033.scaffold00127 890853 1 T A - ScafM SNP 0033.scaffold00127 891042 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 891072 2 GG AT scaffold3621 ScafM SNP 0033.scaffold00127 891089 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 891092 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 891097 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 891117 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 891128 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 891139 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 891144 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 891150 2 AA .. scaffold3621 ScafM SNP 0033.scaffold00127 891171 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 891186 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 891206 1 A G scaffold3621 Both SNP 0033.scaffold00127 891221 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 891296 1 G C - ReadM SNP 0033.scaffold00127 891309 1 C T - ScafM SNP 0033.scaffold00127 891398 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 891405 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 891418 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 891420 1 C T scaffold3621 Both SNP 0033.scaffold00127 891476 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 891576 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 891580 1 . G scaffold3621 ScafM SNP 0033.scaffold00127 891597 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 891601 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 891614 1 G T scaffold3621 Both SNP 0033.scaffold00127 891644 1 C T scaffold3621 Both SNP 0033.scaffold00127 891656 1 C A scaffold3621 ReadM INDEL 0033.scaffold00127 891716 1 . A - ReadM SNP 0033.scaffold00127 891743 1 C T - ReadM SNP 0033.scaffold00127 891791 1 G A - ReadM SNP 0033.scaffold00127 891821 1 T C - ReadM SNP 0033.scaffold00127 891873 1 A G - ReadM SNP 0033.scaffold00127 891895 1 A C - ReadM SNP 0033.scaffold00127 891897 1 T C - ReadM SNP 0033.scaffold00127 892013 1 G A - ReadM SNP 0033.scaffold00127 892047 1 A T - ReadM SNP 0033.scaffold00127 892065 1 C T - ReadM SNP 0033.scaffold00127 892122 1 T C - ReadM SNP 0033.scaffold00127 892127 1 A G - ReadM SNP 0033.scaffold00127 892144 1 T A - ReadM SNP 0033.scaffold00127 892318 1 T C - ReadM SNP 0033.scaffold00127 892402 1 A C - ReadM SNP 0033.scaffold00127 892480 1 C T - ReadM SNP 0033.scaffold00127 892494 1 T C - ReadM SNP 0033.scaffold00127 892574 1 C A - ReadM SNP 0033.scaffold00127 892624 1 C A - ReadM SNP 0033.scaffold00127 892663 2 CC TG - ReadM INDEL 0033.scaffold00127 892737 1 . T - ReadM SNP 0033.scaffold00127 892755 1 A G - ScafM INDEL 0033.scaffold00127 892840 1 . G scaffold3621 ScafM SNP 0033.scaffold00127 892842 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 892845 1 T C scaffold3621 Both SNP 0033.scaffold00127 892857 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 892953 2 TA CG scaffold3621 ScafM SNP 0033.scaffold00127 892963 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 892986 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 892994 1 C G scaffold3621 ScafM INDEL 0033.scaffold00127 893061 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 893063 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 893065 1 T A scaffold3621 Both SNP 0033.scaffold00127 893079 1 A C scaffold3621 Both SNP 0033.scaffold00127 893154 1 T C scaffold3621 Both SNP 0033.scaffold00127 893221 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 893254 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 893256 1 A G scaffold3621 Both SNP 0033.scaffold00127 893295 1 T C scaffold3621 Both SNP 0033.scaffold00127 893388 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 893402 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 893465 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 893476 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 893645 1 T C - ReadM SNP 0033.scaffold00127 893684 1 T G - ReadM SNP 0033.scaffold00127 893796 1 T C - ReadM SNP 0033.scaffold00127 894065 1 G C - Both SNP 0033.scaffold00127 894125 1 A T scaffold3621 Both INDEL 0033.scaffold00127 894128 1 . A scaffold3621 Both SNP 0033.scaffold00127 894189 1 C T scaffold3621 Both SNP 0033.scaffold00127 894202 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 894246 1 G . scaffold3621 ScafM INDEL 0033.scaffold00127 894266 1 . A scaffold3621 ScafM SNP 0033.scaffold00127 894273 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 894295 1 C A scaffold3621 ReadM SNP 0033.scaffold00127 894539 1 G A - ReadM SNP 0033.scaffold00127 894582 1 C T - Both SNP 0033.scaffold00127 894665 1 G A scaffold3621 Both SNP 0033.scaffold00127 894725 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 894759 3 ..C AAA scaffold3621 ScafM SNP 0033.scaffold00127 894768 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 894796 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 894854 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 894857 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 894885 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 894923 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 895014 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 895018 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 895030 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 895049 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 895112 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 895119 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 895153 2 TA GT scaffold3621 ScafM SNP 0033.scaffold00127 895213 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 895235 12 ............ ATATAAATAACA scaffold3621 ScafM INDEL 0033.scaffold00127 895274 1 . T scaffold3621 ScafM INDEL 0033.scaffold00127 895277 2 .. GA scaffold3621 ScafM SNP 0033.scaffold00127 895279 1 G T scaffold3621 ScafM INDEL 0033.scaffold00127 895280 3 ... GAA scaffold3621 ScafM SNP 0033.scaffold00127 895283 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 895297 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 895307 2 AT TA scaffold3621 ScafM SNP 0033.scaffold00127 895313 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 895324 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 895334 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 895342 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 895459 1 A G scaffold3621 Both SNP 0033.scaffold00127 895477 1 A G scaffold3621 Both SNP 0033.scaffold00127 895494 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 895627 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 895634 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 895643 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 895655 1 C T scaffold3621 Both SNP 0033.scaffold00127 895696 1 G A scaffold3621 Both SNP 0033.scaffold00127 895748 1 T G scaffold3621 Both SNP 0033.scaffold00127 895782 1 C T scaffold3621 Both SNP 0033.scaffold00127 895847 1 A G scaffold3621 Both SNP 0033.scaffold00127 895886 1 G A scaffold3621 Both INDEL 0033.scaffold00127 895895 1 C . scaffold3621 Both SNP 0033.scaffold00127 895956 1 G A scaffold3621 Both SNP 0033.scaffold00127 896011 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 896021 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 896791 1 G A - ReadM SNP 0033.scaffold00127 896817 2 CA TG - Both SNP 0033.scaffold00127 896900 1 T C scaffold3621 Both SNP 0033.scaffold00127 896947 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 896982 2 AC CT scaffold3621 Both INDEL 0033.scaffold00127 897047 1 T . scaffold3621 Both SNP 0033.scaffold00127 897089 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 897103 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 897120 2 TG CA scaffold3621 ScafM SNP 0033.scaffold00127 897129 1 G A scaffold3621 Both SNP 0033.scaffold00127 897203 1 T C scaffold3621 Both SNP 0033.scaffold00127 897275 1 C G scaffold3621 Both SNP 0033.scaffold00127 897301 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 897386 1 T C - ReadM SNP 0033.scaffold00127 897543 1 T C - ScafM SNP 0033.scaffold00127 897732 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 897760 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 898026 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 898044 1 G A scaffold3621 Both SNP 0033.scaffold00127 898164 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 898313 1 T C - ReadM SNP 0033.scaffold00127 898340 1 A C - ReadM SNP 0033.scaffold00127 898410 1 A G - ReadM SNP 0033.scaffold00127 898475 1 C T - ReadM SNP 0033.scaffold00127 898516 1 G A - ReadM SNP 0033.scaffold00127 898584 1 C T - ReadM INDEL 0033.scaffold00127 898623 1 . C - ReadM SNP 0033.scaffold00127 898708 1 T C - ReadM SNP 0033.scaffold00127 899053 1 T C - ReadM SNP 0033.scaffold00127 899108 1 T C - ReadM SNP 0033.scaffold00127 899651 1 T G - ReadM SNP 0033.scaffold00127 899656 1 G A - ReadM SNP 0033.scaffold00127 899677 1 A G - ScafM SNP 0033.scaffold00127 900276 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 900314 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 900477 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 900626 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 909037 1 T C - ReadM SNP 0033.scaffold00127 909047 1 T C - ReadM SNP 0033.scaffold00127 909050 1 A G - ReadM SNP 0033.scaffold00127 910121 1 G A - ReadM SNP 0033.scaffold00127 910251 1 G A - ReadM SNP 0033.scaffold00127 910280 1 T C - ReadM SNP 0033.scaffold00127 910335 1 A C - ReadM SNP 0033.scaffold00127 910367 1 A G - ReadM SNP 0033.scaffold00127 910394 1 G A - ReadM SNP 0033.scaffold00127 910405 1 T C - ReadM SNP 0033.scaffold00127 910431 1 T C - ReadM SNP 0033.scaffold00127 910600 1 A G - ReadM SNP 0033.scaffold00127 910832 1 G T - ReadM INDEL 0033.scaffold00127 910879 1 . A - ReadM SNP 0033.scaffold00127 910896 1 C T - ReadM SNP 0033.scaffold00127 910976 1 C G - ReadM SNP 0033.scaffold00127 910993 1 G T - ReadM SNP 0033.scaffold00127 911030 1 T C - ReadM SNP 0033.scaffold00127 911034 1 G T - ReadM SNP 0033.scaffold00127 911310 1 G A - ReadM SNP 0033.scaffold00127 911441 1 T A - ReadM SNP 0033.scaffold00127 911447 1 C T - ReadM SNP 0033.scaffold00127 911718 1 A G - ReadM SNP 0033.scaffold00127 911848 1 T G - ReadM SNP 0033.scaffold00127 911905 1 C G - ReadM SNP 0033.scaffold00127 912035 1 C T - ReadM SNP 0033.scaffold00127 912043 1 G A - ReadM SNP 0033.scaffold00127 912184 1 A C - ReadM SNP 0033.scaffold00127 912224 1 C T - ReadM INDEL 0033.scaffold00127 912255 1 . T - ReadM SNP 0033.scaffold00127 912305 1 C T - ReadM SNP 0033.scaffold00127 912454 1 C T - ReadM SNP 0033.scaffold00127 912558 1 G A - ReadM SNP 0033.scaffold00127 913399 1 G A - ScafM INDEL 0033.scaffold00127 913611 4 .... GTTC scaffold3621 ScafM INDEL 0033.scaffold00127 913612 3 ... AAA scaffold3621 ScafM SNP 0033.scaffold00127 913622 1 A C scaffold3621 Both INDEL 0033.scaffold00127 913652 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 913658 1 G T scaffold3621 Both SNP 0033.scaffold00127 913678 1 G T scaffold3621 ScafM INDEL 0033.scaffold00127 913756 6 ...... TATAAT scaffold3621 ScafM SNP 0033.scaffold00127 913762 2 GA CT scaffold3621 ScafM SNP 0033.scaffold00127 913776 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 913780 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 913835 7 ....... CTTTTTT scaffold3621 ScafM SNP 0033.scaffold00127 913840 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 913855 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 913861 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 913863 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 913870 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 913885 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 913897 1 A G scaffold3621 Both INDEL 0033.scaffold00127 913923 1 A . scaffold3621 Both SNP 0033.scaffold00127 913939 1 G A scaffold3621 Both SNP 0033.scaffold00127 913988 1 A T scaffold3621 Both SNP 0033.scaffold00127 914109 1 T C scaffold3621 Both SNP 0033.scaffold00127 914117 1 A G scaffold3621 Both SNP 0033.scaffold00127 914191 1 T C scaffold3621 Both SNP 0033.scaffold00127 914206 1 C T scaffold3621 Both SNP 0033.scaffold00127 914368 1 A G scaffold3621 Both SNP 0033.scaffold00127 914389 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 914397 1 A G scaffold3621 Both SNP 0033.scaffold00127 914497 1 G A scaffold3621 Both SNP 0033.scaffold00127 914510 1 T C scaffold3621 Both SNP 0033.scaffold00127 914512 1 G A scaffold3621 Both SNP 0033.scaffold00127 914671 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 914763 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 914766 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 914775 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 914786 13 ............. ATGCTTAAAAGAT scaffold3621 ScafM SNP 0033.scaffold00127 914796 1 G A scaffold3621 Both SNP 0033.scaffold00127 914828 1 A C scaffold3621 Both SNP 0033.scaffold00127 914861 1 C T scaffold3621 Both SNP 0033.scaffold00127 914902 1 T G scaffold3621 Both SNP 0033.scaffold00127 914935 1 C A scaffold3621 Both SNP 0033.scaffold00127 915017 1 A G scaffold3621 Both SNP 0033.scaffold00127 915030 1 A T scaffold3621 Both SNP 0033.scaffold00127 915048 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 915085 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 915107 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 915111 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 915113 1 G C scaffold3621 Both SNP 0033.scaffold00127 915284 1 C G scaffold3621 Both SNP 0033.scaffold00127 915313 1 G C scaffold3621 Both SNP 0033.scaffold00127 915430 1 A T scaffold3621 Both SNP 0033.scaffold00127 915561 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 915587 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 915606 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 915610 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 915621 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 915624 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 915649 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 915657 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 915695 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 915697 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 915730 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 915732 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 915745 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 915783 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 915790 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 915811 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 915824 2 AC CT scaffold3621 ScafM SNP 0033.scaffold00127 915828 1 A G scaffold3621 Both SNP 0033.scaffold00127 915898 1 C T scaffold3621 Both SNP 0033.scaffold00127 915948 1 T A scaffold3621 Both SNP 0033.scaffold00127 916011 1 C G scaffold3621 Both SNP 0033.scaffold00127 916026 1 C T scaffold3621 Both SNP 0033.scaffold00127 916037 1 T C scaffold3621 Both SNP 0033.scaffold00127 916093 1 T C scaffold3621 Both SNP 0033.scaffold00127 916158 1 C T scaffold3621 Both SNP 0033.scaffold00127 916223 1 C T scaffold3621 Both SNP 0033.scaffold00127 916246 1 G A scaffold3621 Both SNP 0033.scaffold00127 916264 1 C T scaffold3621 Both SNP 0033.scaffold00127 916293 1 C G scaffold3621 Both SNP 0033.scaffold00127 916397 1 T C scaffold3621 Both SNP 0033.scaffold00127 916934 1 T A scaffold3621 Both SNP 0033.scaffold00127 917206 1 T C scaffold3621 Both SNP 0033.scaffold00127 917278 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 917344 1 T C scaffold3621 Both SNP 0033.scaffold00127 917373 1 T C scaffold3621 Both SNP 0033.scaffold00127 917413 1 C A scaffold3621 Both SNP 0033.scaffold00127 917493 1 C T scaffold3621 Both SNP 0033.scaffold00127 917710 1 T C scaffold3621 Both SNP 0033.scaffold00127 917939 1 T G scaffold3621 Both SNP 0033.scaffold00127 917943 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 917959 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 917993 7 GAACAAT ....... scaffold3621 ScafM INDEL 0033.scaffold00127 918047 4 AGTA .... scaffold3621 ScafM INDEL 0033.scaffold00127 918053 2 AC .. scaffold3621 ScafM INDEL 0033.scaffold00127 918099 9 ......... CCGTCAAGG scaffold3621 ScafM SNP 0033.scaffold00127 918111 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 919415 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 919437 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 919441 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 919505 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 919511 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 919541 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 919549 17 AAAAAAGATCATAAAAG ................. scaffold3621 ScafM INDEL 0033.scaffold00127 919567 13 AAATGAATGTAAG ............. scaffold3621 ScafM SNP 0033.scaffold00127 919603 2 AA GG scaffold3621 ScafM SNP 0033.scaffold00127 919608 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 919628 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 919637 1 T G scaffold3621 ScafM INDEL 0033.scaffold00127 919657 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 919667 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 919669 1 A G scaffold3621 Both SNP 0033.scaffold00127 919816 1 T A scaffold3621 Both SNP 0033.scaffold00127 919830 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 919875 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 920404 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 920438 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 920442 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 920469 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 920482 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 920534 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 920546 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 920551 2 TC CA scaffold3621 ScafM SNP 0033.scaffold00127 920951 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 920984 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 921005 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 921007 1 . G scaffold3621 ScafM SNP 0033.scaffold00127 921009 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 921031 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 921052 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 921054 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 921060 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 921066 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 921096 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 921114 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 921129 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 921138 2 .. CT scaffold3621 ScafM SNP 0033.scaffold00127 921154 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 921162 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 921169 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 921172 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 921180 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 921202 1 G C scaffold3621 Both SNP 0033.scaffold00127 921227 1 C T scaffold3621 Both SNP 0033.scaffold00127 921248 1 T C scaffold3621 Both SNP 0033.scaffold00127 921321 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 921387 1 T G - ReadM SNP 0033.scaffold00127 921402 1 G A - ReadM SNP 0033.scaffold00127 921421 1 C A - ReadM SNP 0033.scaffold00127 921477 1 A C - ReadM SNP 0033.scaffold00127 921647 1 T C - ReadM SNP 0033.scaffold00127 921687 1 A G - ReadM SNP 0033.scaffold00127 921742 1 A T - ReadM INDEL 0033.scaffold00127 921757 1 . C - ReadM SNP 0033.scaffold00127 921767 1 C T - ReadM SNP 0033.scaffold00127 921807 1 C T - ReadM SNP 0033.scaffold00127 921821 1 C T - ReadM SNP 0033.scaffold00127 921883 1 C T - ReadM SNP 0033.scaffold00127 921888 1 C T - ReadM SNP 0033.scaffold00127 922299 1 C T - ReadM SNP 0033.scaffold00127 922304 1 G C - ReadM SNP 0033.scaffold00127 922329 1 A G - ReadM INDEL 0033.scaffold00127 922439 1 A . - ReadM SNP 0033.scaffold00127 922679 1 A T - ReadM SNP 0033.scaffold00127 922705 1 A G - ReadM SNP 0033.scaffold00127 922905 1 T C - ReadM SNP 0033.scaffold00127 922979 1 A G - ReadM SNP 0033.scaffold00127 924698 1 T G - ReadM SNP 0033.scaffold00127 924707 1 C A - ReadM SNP 0033.scaffold00127 924793 1 T C - ReadM SNP 0033.scaffold00127 924844 1 A G - ReadM SNP 0033.scaffold00127 925317 1 C T - ReadM SNP 0033.scaffold00127 925533 1 A G - ReadM SNP 0033.scaffold00127 925575 1 G A - ReadM SNP 0033.scaffold00127 925657 1 T C - ReadM SNP 0033.scaffold00127 925666 1 A G - ReadM SNP 0033.scaffold00127 925724 1 T C - ReadM INDEL 0033.scaffold00127 925746 1 . A - ScafM INDEL 0033.scaffold00127 925854 3 AAA .TG scaffold3621 ScafM SNP 0033.scaffold00127 925862 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 925892 1 T A scaffold3621 ReadM SNP 0033.scaffold00127 925982 1 G A - ScafM SNP 0033.scaffold00127 927398 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 927447 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 927492 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 927872 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 927876 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 927886 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 927948 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 927958 8 TTGGCGAG ........ scaffold3621 ScafM SNP 0033.scaffold00127 928014 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 928019 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 928047 1 A . scaffold3621 ScafM SNP 0033.scaffold00127 928099 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 928129 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 928189 2 GC .A scaffold3621 ScafM SNP 0033.scaffold00127 928217 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 928663 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 928665 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 928710 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 928714 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 928716 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 928740 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 928744 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 929057 2 CC .T scaffold3621 ScafM INDEL 0033.scaffold00127 929074 3 TCC ... scaffold3621 ScafM SNP 0033.scaffold00127 929083 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 929117 1 C G scaffold3621 ScafM INDEL 0033.scaffold00127 929127 5 CCATC ..... scaffold3621 ScafM INDEL 0033.scaffold00127 929134 2 CC .. scaffold3621 ScafM SNP 0033.scaffold00127 929164 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 929186 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 929194 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 929196 2 CA TG scaffold3621 ScafM SNP 0033.scaffold00127 929249 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 929260 2 AG GA scaffold3621 ScafM SNP 0033.scaffold00127 929280 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 929284 2 .. TT scaffold3621 ScafM SNP 0033.scaffold00127 929286 1 C T scaffold3621 Both SNP 0033.scaffold00127 929341 1 G A scaffold3621 Both SNP 0033.scaffold00127 929397 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 929927 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 929931 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 929971 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 929997 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 930033 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 930037 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 930079 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 930182 1 T G scaffold3621 Both SNP 0033.scaffold00127 931578 1 T C scaffold3621 Both SNP 0033.scaffold00127 931583 1 T C scaffold3621 Both SNP 0033.scaffold00127 931595 1 A G scaffold3621 Both SNP 0033.scaffold00127 931673 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 931683 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 931686 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 931722 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 931733 1 . A scaffold3621 ScafM SNP 0033.scaffold00127 931736 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 931739 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 931764 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 931796 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 931798 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 931806 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 931820 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 931835 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 931846 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 931865 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 931893 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 931932 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 931938 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 933052 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 933091 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 933099 2 TA .. scaffold3621 ScafM SNP 0033.scaffold00127 933107 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 933191 5 GCACT ..... scaffold3621 ScafM SNP 0033.scaffold00127 933207 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 933218 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 933258 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 933297 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 933313 1 A C scaffold3621 ScafM INDEL 0033.scaffold00127 933327 1 . T scaffold3621 ScafM SNP 0033.scaffold00127 933347 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 933393 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 933409 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 933418 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 933420 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 933613 1 G T scaffold3621 ReadM SNP 0033.scaffold00127 933666 1 G A - ReadM SNP 0033.scaffold00127 933678 1 T G - ScafM SNP 0033.scaffold00127 933799 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 933839 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 933841 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 933856 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 933876 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 934084 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934094 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 934097 1 C A scaffold3621 ScafM INDEL 0033.scaffold00127 934129 2 .T GA scaffold3621 ScafM SNP 0033.scaffold00127 934141 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 934143 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934150 1 G C scaffold3621 ScafM INDEL 0033.scaffold00127 934170 2 AG .. scaffold3621 ScafM SNP 0033.scaffold00127 934176 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 934197 1 A G scaffold3621 ReadM SNP 0033.scaffold00127 934260 1 T C - Both SNP 0033.scaffold00127 934298 1 T C scaffold3621 Both SNP 0033.scaffold00127 934318 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934352 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 934355 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 934358 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934368 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 934377 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934392 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 934399 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 934401 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 934420 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 934437 1 G A scaffold3621 ScafM INDEL 0033.scaffold00127 934446 1 G . scaffold3621 ScafM SNP 0033.scaffold00127 934453 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 934459 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 934490 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 934516 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 934522 16 ................ GAGGGGTGGGATATTG scaffold3621 ScafM SNP 0033.scaffold00127 934560 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 934568 1 T G scaffold3621 ScafM INDEL 0033.scaffold00127 934590 29 GGATAGTTTCCATTGGTCATTTAGTTGTA ............................. scaffold3621 ReadM SNP 0033.scaffold00127 934716 1 G A - Both SNP 0033.scaffold00127 934820 1 C G scaffold3621 Both SNP 0033.scaffold00127 934828 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 934907 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 934910 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 934919 1 T A scaffold3621 Both SNP 0033.scaffold00127 934935 1 C T scaffold3621 Both SNP 0033.scaffold00127 935134 1 G C scaffold3621 Both SNP 0033.scaffold00127 935175 1 G A scaffold3621 Both SNP 0033.scaffold00127 935227 1 G A scaffold3621 Both SNP 0033.scaffold00127 935243 1 G T scaffold3621 Both SNP 0033.scaffold00127 935271 1 T C scaffold3621 Both SNP 0033.scaffold00127 935294 1 A G scaffold3621 Both SNP 0033.scaffold00127 935444 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 935451 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 935455 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 935460 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 935521 1 T A scaffold3621 ScafM SNP 0033.scaffold00127 935530 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 935549 6 CTAATT ...... scaffold3621 ScafM INDEL 0033.scaffold00127 935557 11 CATCCCACTAC ........... scaffold3621 ScafM INDEL 0033.scaffold00127 935569 10 GGGTTGCTTC .......... scaffold3621 ScafM INDEL 0033.scaffold00127 935584 6 GAAAAT ...... scaffold3621 ScafM INDEL 0033.scaffold00127 935591 2 AT .. scaffold3621 ScafM SNP 0033.scaffold00127 935642 2 CC TG scaffold3621 ScafM SNP 0033.scaffold00127 935662 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 935667 2 .. TG scaffold3621 Both SNP 0033.scaffold00127 935708 1 T C scaffold3621 Both SNP 0033.scaffold00127 935791 1 A T scaffold3621 ScafM INDEL 0033.scaffold00127 935839 71 CTAGCCAACATGAAAAGAACTTTAGAATTTCACTTGTTTGCTATATAAGATTCCTAGTGTGAAAATAAACT ....................................................................... scaffold3621 ScafM SNP 0033.scaffold00127 935928 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 935935 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 935943 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 935962 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 935989 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 935991 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 936008 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 936018 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 936040 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 936046 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 936094 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 936111 5 ..... TGGGA scaffold3621 ScafM SNP 0033.scaffold00127 936113 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 936116 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 936118 2 TT GG scaffold3621 ScafM SNP 0033.scaffold00127 936124 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 936148 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 936150 1 G A scaffold3621 ReadM SNP 0033.scaffold00127 936229 1 C T - ReadM SNP 0033.scaffold00127 936262 1 T G - ReadM SNP 0033.scaffold00127 936553 1 C T - ReadM SNP 0033.scaffold00127 936571 1 T G - ReadM SNP 0033.scaffold00127 936669 1 A G - ReadM SNP 0033.scaffold00127 936677 1 T C - ScafM SNP 0033.scaffold00127 937055 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 937063 1 T . scaffold3621 ScafM SNP 0033.scaffold00127 937091 1 C T scaffold3621 ScafM INDEL 0033.scaffold00127 937098 3 ... AAA scaffold3621 ScafM INDEL 0033.scaffold00127 937101 3 ... AAA scaffold3621 ScafM SNP 0033.scaffold00127 937118 1 T C scaffold3621 Both SNP 0033.scaffold00127 937188 1 A C scaffold3621 Both SNP 0033.scaffold00127 937199 1 A T scaffold3621 ScafM INDEL 0033.scaffold00127 937227 9 ......... AATATGCGA scaffold3621 ScafM SNP 0033.scaffold00127 937243 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 937273 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 937289 1 T A scaffold3621 ScafM INDEL 0033.scaffold00127 937313 6 ...... ATAGCA scaffold3621 ScafM SNP 0033.scaffold00127 937347 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 937375 1 . A scaffold3621 ScafM SNP 0033.scaffold00127 937378 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 937381 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 937441 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 937450 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 937454 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 937458 2 AA TC scaffold3621 ScafM SNP 0033.scaffold00127 937464 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 937478 2 TA CT scaffold3621 ScafM SNP 0033.scaffold00127 937484 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 937486 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 937500 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 937520 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 937557 1 G T scaffold3621 ScafM SNP 0033.scaffold00127 937559 2 GT AC scaffold3621 ScafM SNP 0033.scaffold00127 937566 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 937585 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 937605 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 937607 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 937610 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 937636 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 937653 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 937658 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 937664 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 937693 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 937697 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 937736 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 937742 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 937770 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 937785 2 CC GG scaffold3621 Both SNP 0033.scaffold00127 937829 1 T C scaffold3621 Both SNP 0033.scaffold00127 937859 1 T G scaffold3621 Both SNP 0033.scaffold00127 937917 1 C G scaffold3621 Both INDEL 0033.scaffold00127 937927 1 . A scaffold3621 ScafM SNP 0033.scaffold00127 937970 1 A G scaffold3621 ScafM SNP 0033.scaffold00127 937975 2 TG CA scaffold3621 ScafM SNP 0033.scaffold00127 937983 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 937995 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 938066 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 938100 1 A G scaffold3621 ScafM INDEL 0033.scaffold00127 938139 9 ......... CGCAAATAG scaffold3621 Both SNP 0033.scaffold00127 938231 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 938244 1 A C scaffold3621 ScafM SNP 0033.scaffold00127 938246 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 938269 1 T C scaffold3621 Both SNP 0033.scaffold00127 938325 1 A G scaffold3621 Both SNP 0033.scaffold00127 938451 1 A C scaffold3621 Both SNP 0033.scaffold00127 938471 1 A C scaffold3621 Both SNP 0033.scaffold00127 938576 1 T A scaffold3621 Both SNP 0033.scaffold00127 938624 1 A T scaffold3621 ScafM SNP 0033.scaffold00127 938652 1 A T scaffold3621 Both SNP 0033.scaffold00127 938675 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 938861 1 C T - ReadM SNP 0033.scaffold00127 939513 1 C T - ReadM SNP 0033.scaffold00127 940119 1 A G - ReadM SNP 0033.scaffold00127 940214 1 C T - ReadM SNP 0033.scaffold00127 940310 1 C G - ReadM SNP 0033.scaffold00127 940818 1 T C - ReadM SNP 0033.scaffold00127 940911 1 A T - ReadM SNP 0033.scaffold00127 941239 1 C T - ReadM SNP 0033.scaffold00127 941493 1 A G - ReadM SNP 0033.scaffold00127 942165 1 G A - ReadM INDEL 0033.scaffold00127 942626 1 T . - ReadM SNP 0033.scaffold00127 942683 1 T G - Both SNP 0033.scaffold00127 942790 1 C T scaffold3621 ReadM SNP 0033.scaffold00127 942855 1 C T - ReadM SNP 0033.scaffold00127 942932 1 G A - ReadM SNP 0033.scaffold00127 943025 1 C T - ReadM SNP 0033.scaffold00127 943073 1 C T - ReadM SNP 0033.scaffold00127 943239 1 A T - ReadM SNP 0033.scaffold00127 943272 1 G A - ReadM SNP 0033.scaffold00127 943458 1 G A - ReadM SNP 0033.scaffold00127 943664 1 T G - ReadM SNP 0033.scaffold00127 943890 1 A G - ReadM INDEL 0033.scaffold00127 943945 1 . G - ReadM SNP 0033.scaffold00127 944052 1 T C - ScafM SNP 0033.scaffold00127 944590 1 T C scaffold3621 ScafM INDEL 0033.scaffold00127 944610 1 . A scaffold3621 ScafM INDEL 0033.scaffold00127 944611 2 .C AA scaffold3621 ScafM SNP 0033.scaffold00127 944664 1 A C scaffold3621 Both SNP 0033.scaffold00127 945253 1 G A scaffold3621 ReadM INDEL 0033.scaffold00127 945732 3 ... TTT - ScafM INDEL 0033.scaffold00127 945741 4 .... TTTT scaffold3621 ScafM SNP 0033.scaffold00127 946134 1 G A scaffold3621 Both SNP 0033.scaffold00127 946256 1 G A scaffold3621 Both SNP 0033.scaffold00127 946318 1 T C scaffold3621 ReadM SNP 0033.scaffold00127 946357 1 T C - ReadM SNP 0033.scaffold00127 946477 1 T C - ReadM SNP 0033.scaffold00127 947446 1 T C - ReadM SNP 0033.scaffold00127 947450 1 A C - Both SNP 0033.scaffold00127 947772 1 C T scaffold3621 Both SNP 0033.scaffold00127 947786 1 C T scaffold3621 Both INDEL 0033.scaffold00127 947815 1 A . scaffold3621 ReadM SNP 0033.scaffold00127 947983 1 G A - ReadM SNP 0033.scaffold00127 948011 1 T G - Both SNP 0033.scaffold00127 949714 1 G A scaffold3621 Both SNP 0033.scaffold00127 949716 1 G C scaffold3621 ScafM SNP 0033.scaffold00127 949757 1 C T scaffold3621 ReadM INDEL 0033.scaffold00127 950164 2 CC .. - ScafM SNP 0033.scaffold00127 950532 1 A C scaffold3621 Both SNP 0033.scaffold00127 950756 1 A T scaffold3621 ReadM SNP 0033.scaffold00127 951491 1 C T - ScafM SNP 0033.scaffold00127 951673 1 C T scaffold3621 Both SNP 0033.scaffold00127 952142 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 952456 1 C T scaffold3621 ScafM SNP 0033.scaffold00127 952482 1 T C scaffold3621 ScafM SNP 0033.scaffold00127 952508 1 G A scaffold3621 ScafM SNP 0033.scaffold00127 952640 1 G A scaffold3621 Both SNP 0033.scaffold00127 952710 1 T G scaffold3621 ScafM SNP 0033.scaffold00127 952981 1 C T scaffold3621 Both SNP 0033.scaffold00127 953121 1 C T scaffold3621 Both SNP 0033.scaffold00127 953140 1 T G scaffold3621 Both SNP 0033.scaffold00127 953174 1 C A scaffold3621 ScafM SNP 0033.scaffold00127 953263 1 C G scaffold3621 ScafM SNP 0033.scaffold00127 953325 1 C G scaffold3621 ScafM INDEL 0033.scaffold00127 953868 6 ...... TGCGGA scaffold13665 ScafM SNP 0033.scaffold00127 953887 1 C A scaffold13665 ScafM SNP 0033.scaffold00127 953985 2 CG TC scaffold13665 ScafM SNP 0033.scaffold00127 954019 1 T A scaffold13665 ScafM SNP 0033.scaffold00127 954034 1 T C scaffold13665 ReadM SNP 0033.scaffold00127 954310 1 G A - ScafM SNP 0033.scaffold00127 954448 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 954460 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 954509 1 A G scaffold13665 Both SNP 0033.scaffold00127 954562 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 954603 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 954663 1 T C scaffold13665 ScafM INDEL 0033.scaffold00127 954690 1 . T scaffold13665 ScafM SNP 0033.scaffold00127 954762 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 954768 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 954827 1 T C scaffold13665 ScafM SNP 0033.scaffold00127 954858 1 C A scaffold13665 ScafM SNP 0033.scaffold00127 954871 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 954890 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 954897 1 A T scaffold13665 ScafM SNP 0033.scaffold00127 954909 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 954960 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 954967 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 955055 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 955062 1 A C scaffold13665 ScafM SNP 0033.scaffold00127 955206 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 955224 1 T C scaffold13665 ScafM SNP 0033.scaffold00127 955233 1 A T scaffold13665 ScafM SNP 0033.scaffold00127 955290 1 C T scaffold13665 Both SNP 0033.scaffold00127 955320 1 A C scaffold13665 ScafM SNP 0033.scaffold00127 955325 1 T A scaffold13665 ScafM SNP 0033.scaffold00127 955328 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 955589 1 A T scaffold13665 ScafM INDEL 0033.scaffold00127 955602 1 . T scaffold13665 ScafM SNP 0033.scaffold00127 955635 1 A C scaffold13665 ScafM SNP 0033.scaffold00127 955697 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 955722 1 T C scaffold13665 ScafM SNP 0033.scaffold00127 955752 1 T A scaffold13665 ScafM SNP 0033.scaffold00127 955771 1 C A scaffold13665 ScafM SNP 0033.scaffold00127 955893 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 955987 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956007 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956010 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956097 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956121 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 956144 2 TG AT scaffold13665 ScafM SNP 0033.scaffold00127 956208 1 T G scaffold13665 Both INDEL 0033.scaffold00127 956227 1 T . scaffold13665 ScafM SNP 0033.scaffold00127 956261 1 A G scaffold13665 ScafM SNP 0033.scaffold00127 956296 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956381 1 C T scaffold13665 ScafM INDEL 0033.scaffold00127 956445 3 ... ACT scaffold13665 Both SNP 0033.scaffold00127 956454 1 A C scaffold13665 ScafM SNP 0033.scaffold00127 956523 1 T G scaffold13665 ScafM INDEL 0033.scaffold00127 956768 1 G . scaffold13665 ScafM SNP 0033.scaffold00127 956799 1 A C scaffold13665 ScafM SNP 0033.scaffold00127 956803 1 G C scaffold13665 ScafM SNP 0033.scaffold00127 956870 1 C A scaffold13665 ScafM SNP 0033.scaffold00127 956897 1 G A scaffold13665 ScafM SNP 0033.scaffold00127 956970 1 C T scaffold13665 ScafM SNP 0033.scaffold00127 957030 1 T A scaffold13665 ScafM SNP 0033.scaffold00127 957045 1 C T scaffold13665 ScafM INDEL 0033.scaffold00127 957064 4 .... CATT scaffold13665 ScafM SNP 0033.scaffold00127 957068 1 T C scaffold13665 ScafM INDEL 0033.scaffold00127 957096 69 ..................................................................... ATTAAGGTTATGGATTTGTAGTGTTTGTCAAGCAGCTTCATTCTGCAGCTTTTTTAATTTATGTGATAG scaffold13665 ScafM INDEL 0033.scaffold00127 957097 5 ..... AATTA scaffold13665 ReadM SNP 0033.scaffold00127 957627 1 T C - ReadM SNP 0033.scaffold00127 957757 1 A G - ReadM SNP 0033.scaffold00127 957993 1 G A - ReadM SNP 0033.scaffold00127 958462 1 A G - ReadM SNP 0033.scaffold00127 958589 1 A C - ReadM SNP 0033.scaffold00127 958958 1 T C - ReadM SNP 0033.scaffold00127 959018 1 G A - ReadM SNP 0033.scaffold00127 959033 1 G A - ReadM SNP 0033.scaffold00127 959120 1 G A - ScafM SNP 0033.scaffold00127 959209 1 C G scaffold26397 Both SNP 0033.scaffold00127 959264 1 A G scaffold26397 ScafM SNP 0033.scaffold00127 959273 1 C A scaffold26397 ReadM SNP 0033.scaffold00127 959833 1 T G - ScafM SNP 0033.scaffold00127 962017 1 T A scaffold2739 ScafM SNP 0033.scaffold00127 962020 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962032 1 C T scaffold2739 ScafM INDEL 0033.scaffold00127 962035 1 C . scaffold2739 ScafM INDEL 0033.scaffold00127 962039 3 CTA ... scaffold2739 ScafM SNP 0033.scaffold00127 962052 1 A T scaffold2739 ScafM SNP 0033.scaffold00127 962066 1 T C scaffold2739 ScafM SNP 0033.scaffold00127 962081 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962101 1 A C scaffold2739 ScafM SNP 0033.scaffold00127 962104 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962114 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962124 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962126 1 T G scaffold2739 ScafM SNP 0033.scaffold00127 962150 1 A G scaffold2739 Both SNP 0033.scaffold00127 962163 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962182 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962258 1 C G scaffold2739 ScafM SNP 0033.scaffold00127 962265 2 TC AT scaffold2739 ScafM SNP 0033.scaffold00127 962271 1 T C scaffold2739 ScafM SNP 0033.scaffold00127 962274 1 T A scaffold2739 ScafM INDEL 0033.scaffold00127 962276 1 . A scaffold2739 ScafM SNP 0033.scaffold00127 962282 1 G T scaffold2739 ScafM SNP 0033.scaffold00127 962284 1 T A scaffold2739 ScafM INDEL 0033.scaffold00127 962286 1 . A scaffold2739 ScafM SNP 0033.scaffold00127 962295 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962318 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962325 1 T G scaffold2739 ScafM SNP 0033.scaffold00127 962327 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962343 1 C G scaffold2739 ScafM SNP 0033.scaffold00127 962365 1 T C scaffold2739 ScafM SNP 0033.scaffold00127 962369 1 G C scaffold2739 ScafM SNP 0033.scaffold00127 962372 1 G A scaffold2739 Both SNP 0033.scaffold00127 962377 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962394 1 G A scaffold2739 ScafM INDEL 0033.scaffold00127 962399 1 . G scaffold2739 ScafM SNP 0033.scaffold00127 962404 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962407 1 G A scaffold2739 ScafM SNP 0033.scaffold00127 962453 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962469 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962472 1 A T scaffold2739 ScafM SNP 0033.scaffold00127 962477 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962481 1 T G scaffold2739 ScafM SNP 0033.scaffold00127 962488 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962503 1 G T scaffold2739 ScafM SNP 0033.scaffold00127 962505 1 T C scaffold2739 ScafM SNP 0033.scaffold00127 962514 1 C A scaffold2739 ScafM SNP 0033.scaffold00127 962525 1 A G scaffold2739 ScafM SNP 0033.scaffold00127 962536 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962539 1 C T scaffold2739 ScafM SNP 0033.scaffold00127 962541 1 C G scaffold2739 ScafM SNP 0033.scaffold00127 962559 1 G C scaffold2739 ScafM INDEL 0033.scaffold00127 962578 1 G . scaffold2739 ScafM INDEL 0033.scaffold00127 962582 3 ATC ... scaffold2739 ReadM SNP 0033.scaffold00127 964510 1 G T - ReadM SNP 0033.scaffold00127 964522 1 G A - ReadM SNP 0033.scaffold00127 964531 1 T C - Both SNP 0033.scaffold00127 964926 1 T C scaffold8237 Both SNP 0033.scaffold00127 964956 1 C T scaffold8237 Both SNP 0033.scaffold00127 965133 1 C A scaffold8237 Both SNP 0033.scaffold00127 965143 1 G A scaffold8237 Both SNP 0033.scaffold00127 965195 1 C G scaffold8237 Both SNP 0033.scaffold00127 965322 1 C T scaffold8237 Both INDEL 0033.scaffold00127 965352 1 . G scaffold8237 ScafM SNP 0033.scaffold00127 965470 1 G A scaffold8237 Both SNP 0033.scaffold00127 965477 1 C T scaffold8237 Both SNP 0033.scaffold00127 965490 1 C G scaffold8237 Both SNP 0033.scaffold00127 965854 1 G A scaffold8237 Both SNP 0033.scaffold00127 965877 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 965901 2 TT AA scaffold8237 Both SNP 0033.scaffold00127 965957 1 T C scaffold8237 Both SNP 0033.scaffold00127 966009 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 966064 1 G A scaffold8237 ScafM SNP 0033.scaffold00127 966166 2 AC CT scaffold8237 ScafM SNP 0033.scaffold00127 966169 1 A G scaffold8237 ScafM SNP 0033.scaffold00127 966197 1 G T scaffold8237 ScafM SNP 0033.scaffold00127 966207 1 T C scaffold8237 ScafM SNP 0033.scaffold00127 966210 1 T G scaffold8237 ScafM INDEL 0033.scaffold00127 966235 9 ......... ATGGAGAAG scaffold8237 Both SNP 0033.scaffold00127 966300 1 C T scaffold8237 ReadM SNP 0033.scaffold00127 966411 1 A G - ReadM SNP 0033.scaffold00127 966549 1 A G - ReadM SNP 0033.scaffold00127 966600 1 A G - ReadM SNP 0033.scaffold00127 966606 1 C G - ReadM INDEL 0033.scaffold00127 966678 1 A . - ReadM SNP 0033.scaffold00127 966753 1 A G - ReadM SNP 0033.scaffold00127 966855 1 C A - ScafM SNP 0033.scaffold00127 966967 1 G T scaffold8237 ScafM SNP 0033.scaffold00127 967025 1 G T scaffold8237 ScafM SNP 0033.scaffold00127 967077 1 T C scaffold8237 Both SNP 0033.scaffold00127 967081 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 967083 1 G T scaffold8237 Both SNP 0033.scaffold00127 967314 1 G T scaffold8237 ScafM SNP 0033.scaffold00127 967316 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 967323 1 C G scaffold8237 ReadM SNP 0033.scaffold00127 967645 1 A T - ReadM SNP 0033.scaffold00127 967937 1 C T - ReadM SNP 0033.scaffold00127 968127 1 T A - ScafM SNP 0033.scaffold00127 968298 1 C A scaffold8237 ScafM INDEL 0033.scaffold00127 968329 1 . A scaffold8237 ScafM SNP 0033.scaffold00127 968538 1 T C scaffold8237 ScafM SNP 0033.scaffold00127 968571 1 G T scaffold8237 ScafM SNP 0033.scaffold00127 968585 1 G C scaffold8237 ScafM SNP 0033.scaffold00127 968594 1 T C scaffold8237 ScafM INDEL 0033.scaffold00127 968599 2 .. AA scaffold8237 Both SNP 0033.scaffold00127 968677 1 T G scaffold8237 ScafM SNP 0033.scaffold00127 968707 1 G T scaffold8237 Both SNP 0033.scaffold00127 968774 1 C T scaffold8237 Both SNP 0033.scaffold00127 968793 1 A T scaffold8237 ScafM SNP 0033.scaffold00127 968833 1 C G scaffold8237 ScafM INDEL 0033.scaffold00127 968844 3 AAA ... scaffold8237 ScafM SNP 0033.scaffold00127 968856 1 A G scaffold8237 ScafM SNP 0033.scaffold00127 968921 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 968925 1 G A scaffold8237 ScafM SNP 0033.scaffold00127 968942 1 T C scaffold8237 ScafM SNP 0033.scaffold00127 968951 1 T G scaffold8237 ScafM INDEL 0033.scaffold00127 968999 6 ...... GGTGTG scaffold8237 ScafM INDEL 0033.scaffold00127 969001 2 .. GC scaffold8237 ScafM SNP 0033.scaffold00127 969051 1 C T scaffold8237 ScafM SNP 0033.scaffold00127 969075 1 G A scaffold8237 ScafM SNP 0033.scaffold00127 969077 1 T C scaffold8237 ScafM INDEL 0033.scaffold00127 969079 1 A . scaffold8237 ScafM SNP 0033.scaffold00127 969081 2 GC TA scaffold8237 ScafM SNP 0033.scaffold00127 969087 1 T G scaffold8237 ScafM INDEL 0033.scaffold00127 969089 1 G . scaffold8237 ScafM INDEL 0033.scaffold00127 969093 3 TTC .GA scaffold8237 ScafM INDEL 0033.scaffold00127 969098 1 C . scaffold8237 ScafM INDEL 0033.scaffold00127 969100 2 .C TT scaffold8237 ScafM SNP 0033.scaffold00127 969103 1 A G scaffold8237 ScafM SNP 0033.scaffold00127 969105 1 A G scaffold8237 ScafM SNP 0033.scaffold00127 969110 1 A G scaffold8237 Both SNP 0033.scaffold00127 969181 1 T A scaffold8237 Both SNP 0033.scaffold00127 969191 1 G A scaffold8237 Both SNP 0033.scaffold00127 969300 1 T C scaffold8237 Both SNP 0033.scaffold00127 969317 1 C A scaffold8237 Both SNP 0033.scaffold00127 969573 1 G A scaffold8237 Both SNP 0033.scaffold00127 969587 1 G T scaffold8237 Both SNP 0033.scaffold00127 969696 1 C T scaffold8237 Both SNP 0033.scaffold00127 969707 1 T C scaffold8237 Both SNP 0033.scaffold00127 969772 1 T G scaffold8237 ScafM SNP 0033.scaffold00127 969821 2 TT GA scaffold8237 ScafM SNP 0033.scaffold00127 969906 1 T G scaffold8237 ScafM SNP 0033.scaffold00127 969918 1 T C scaffold8237 ReadM SNP 0033.scaffold00127 970357 1 A C - ReadM INDEL 0033.scaffold00127 970380 1 C . - ReadM SNP 0033.scaffold00127 970515 1 G A - ReadM SNP 0033.scaffold00127 970534 1 C T - ReadM INDEL 0033.scaffold00127 970633 1 . T - ReadM SNP 0033.scaffold00127 970682 1 T C - ReadM SNP 0033.scaffold00127 971510 1 A G - ReadM SNP 0033.scaffold00127 971526 1 G A - ReadM SNP 0033.scaffold00127 971530 1 C G - ReadM SNP 0033.scaffold00127 971704 1 G T - ReadM SNP 0033.scaffold00127 971782 1 G T - ReadM SNP 0033.scaffold00127 971812 1 T C - ReadM SNP 0033.scaffold00127 972033 1 G T - ReadM SNP 0033.scaffold00127 972044 1 G A - ScafM SNP 0033.scaffold00127 972416 1 T A scaffold12384 ReadM SNP 0033.scaffold00127 972550 1 G T - Both SNP 0033.scaffold00127 972577 1 A G scaffold12384 ScafM INDEL 0033.scaffold00127 972679 1 T . scaffold12384 ScafM SNP 0033.scaffold00127 972681 1 T A scaffold12384 ScafM SNP 0033.scaffold00127 972696 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 972715 1 A G scaffold12384 Both SNP 0033.scaffold00127 972864 1 G C scaffold12384 Both SNP 0033.scaffold00127 972869 1 C A scaffold12384 ScafM SNP 0033.scaffold00127 972911 1 C A scaffold12384 ScafM INDEL 0033.scaffold00127 972921 7 ....... TATTGAT scaffold12384 ScafM INDEL 0033.scaffold00127 972986 5 ..... ATTAA scaffold12384 Both SNP 0033.scaffold00127 973011 1 G A scaffold12384 ReadM SNP 0033.scaffold00127 973221 1 T C - ReadM INDEL 0033.scaffold00127 973242 1 . T - ReadM SNP 0033.scaffold00127 973381 1 A C - ReadM SNP 0033.scaffold00127 973388 1 T C - ReadM SNP 0033.scaffold00127 973456 1 T G - ReadM SNP 0033.scaffold00127 973461 1 T A - ReadM SNP 0033.scaffold00127 973502 1 A C - ScafM SNP 0033.scaffold00127 973800 1 T G scaffold12384 ScafM SNP 0033.scaffold00127 973860 1 G A scaffold12384 ScafM SNP 0033.scaffold00127 973875 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 973914 1 A G scaffold12384 ScafM INDEL 0033.scaffold00127 973936 1 . T scaffold12384 ScafM SNP 0033.scaffold00127 973943 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 981972 1 G A scaffold12384 ScafM SNP 0033.scaffold00127 982118 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 982134 1 T A scaffold12384 ReadM SNP 0033.scaffold00127 982264 1 A G - ReadM SNP 0033.scaffold00127 982272 1 T C - ReadM SNP 0033.scaffold00127 982332 1 C T - ReadM SNP 0033.scaffold00127 982371 1 G A - ReadM SNP 0033.scaffold00127 982387 1 A G - Both SNP 0033.scaffold00127 982587 1 G A scaffold12384 ScafM INDEL 0033.scaffold00127 982793 2 .. AC scaffold12384 ScafM INDEL 0033.scaffold00127 982796 68 .................................................................... GAATCTGCAATGGCTATATTATCGTCAATTGTGGATGCAGAACGGCTTTGCAGCGTTGAAGACGATAA scaffold12384 ScafM INDEL 0033.scaffold00127 982798 3 ... GGA scaffold12384 Both SNP 0033.scaffold00127 982940 1 C A scaffold12384 Both SNP 0033.scaffold00127 983375 1 G A scaffold12384 Both SNP 0033.scaffold00127 983458 1 T G scaffold12384 ReadM SNP 0033.scaffold00127 983549 1 G A - Both INDEL 0033.scaffold00127 983689 2 .. AT scaffold12384 ScafM SNP 0033.scaffold00127 983697 1 G A scaffold12384 ReadM SNP 0033.scaffold00127 983803 1 A T - ReadM SNP 0033.scaffold00127 983825 1 A C - Both SNP 0033.scaffold00127 983888 1 C G scaffold12384 Both INDEL 0033.scaffold00127 983940 1 . C scaffold12384 Both SNP 0033.scaffold00127 983944 1 A G scaffold12384 Both SNP 0033.scaffold00127 984001 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 984524 1 A C scaffold12384 ScafM INDEL 0033.scaffold00127 984571 1 . A scaffold12384 ScafM INDEL 0033.scaffold00127 984577 1 . T scaffold12384 ScafM SNP 0033.scaffold00127 984601 1 T C scaffold12384 ScafM SNP 0033.scaffold00127 984614 1 T A scaffold12384 Both SNP 0033.scaffold00127 985270 1 G A scaffold22640 Both SNP 0033.scaffold00127 985328 1 T C scaffold22640 Both SNP 0033.scaffold00127 985440 1 C A scaffold22640 Both SNP 0033.scaffold00127 985508 1 C T scaffold22640 ReadM INDEL 0033.scaffold00127 985662 1 T . - ScafM INDEL 0033.scaffold00127 985662 2 TT .C scaffold22640 Both SNP 0033.scaffold00127 985720 1 G A scaffold22640 ReadM INDEL 0033.scaffold00127 985790 1 . T - ReadM SNP 0033.scaffold00127 985938 1 C T - Both SNP 0033.scaffold00127 986010 1 A G scaffold22640 ReadM SNP 0033.scaffold00127 986092 1 T G - ReadM SNP 0033.scaffold00127 986118 1 T C - ReadM SNP 0033.scaffold00127 986137 1 T C - ScafM SNP 0033.scaffold00127 986237 1 C T scaffold22640 Both SNP 0033.scaffold00127 986359 1 C T scaffold22640 ReadM SNP 0033.scaffold00127 986454 1 A G - ReadM SNP 0033.scaffold00127 986482 1 C T - Both SNP 0033.scaffold00127 986605 1 C A scaffold22640 Both SNP 0033.scaffold00127 986650 1 A G scaffold22640 ReadM INDEL 0033.scaffold00127 986780 1 T . - Both SNP 0033.scaffold00127 987121 1 T C scaffold22640 ScafM INDEL 0033.scaffold00127 987922 4 GATC .... scaffold22640 Both SNP 0033.scaffold00127 988054 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 988077 1 C T - ReadM SNP 0033.scaffold00127 988201 1 A G - ReadM INDEL 0033.scaffold00127 988249 1 . T - Both SNP 0033.scaffold00127 988330 1 C T scaffold22640 ReadM SNP 0033.scaffold00127 988368 1 A G - ReadM SNP 0033.scaffold00127 988520 1 A G - ReadM SNP 0033.scaffold00127 988669 1 A G - ScafM SNP 0033.scaffold00127 989599 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 989641 1 T C scaffold22640 ScafM INDEL 0033.scaffold00127 989692 3 ... TCT scaffold22640 ScafM SNP 0033.scaffold00127 989726 1 T C scaffold22640 ReadM INDEL 0033.scaffold00127 990023 1 . T - ReadM SNP 0033.scaffold00127 990262 1 T C - ReadM SNP 0033.scaffold00127 990267 1 C G - ReadM SNP 0033.scaffold00127 990579 1 A C - ReadM SNP 0033.scaffold00127 990886 1 T C - ReadM SNP 0033.scaffold00127 991112 1 C T - ReadM SNP 0033.scaffold00127 991161 1 A G - ReadM SNP 0033.scaffold00127 991206 1 A G - ReadM SNP 0033.scaffold00127 991213 1 G A - ReadM SNP 0033.scaffold00127 991269 1 G A - ReadM SNP 0033.scaffold00127 991391 1 T C - ReadM SNP 0033.scaffold00127 991541 1 A C - ReadM SNP 0033.scaffold00127 991622 1 C G - ReadM INDEL 0033.scaffold00127 991678 2 .. TA - ReadM SNP 0033.scaffold00127 991820 1 G A - Both SNP 0033.scaffold00127 992092 1 C T scaffold22640 Both SNP 0033.scaffold00127 992172 1 C T scaffold22640 Both SNP 0033.scaffold00127 992179 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 992553 1 G A - ReadM SNP 0033.scaffold00127 992999 1 A G - ReadM SNP 0033.scaffold00127 993005 1 A G - ReadM SNP 0033.scaffold00127 993010 1 G A - ReadM SNP 0033.scaffold00127 993284 1 G A - ReadM SNP 0033.scaffold00127 993427 1 T C - ReadM SNP 0033.scaffold00127 993607 1 T C - ReadM SNP 0033.scaffold00127 993617 1 G T - ScafM SNP 0033.scaffold00127 994047 1 A T scaffold22640 ScafM INDEL 0033.scaffold00127 994052 3 ... TTG scaffold22640 ReadM SNP 0033.scaffold00127 994091 1 C A - Both SNP 0033.scaffold00127 994325 1 T C scaffold22640 Both SNP 0033.scaffold00127 994569 1 A G scaffold22640 Both SNP 0033.scaffold00127 994923 1 C A scaffold22640 Both SNP 0033.scaffold00127 994993 1 G A scaffold22640 Both SNP 0033.scaffold00127 995181 1 A T scaffold22640 ReadM SNP 0033.scaffold00127 995917 1 C G - ReadM SNP 0033.scaffold00127 995993 1 T C - ReadM SNP 0033.scaffold00127 996271 1 A G - ReadM SNP 0033.scaffold00127 996345 1 C T - ReadM SNP 0033.scaffold00127 996542 1 T C - ReadM SNP 0033.scaffold00127 996656 1 C T - ScafM SNP 0033.scaffold00127 996919 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 997022 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 997057 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 997152 1 A T scaffold22640 ReadM SNP 0033.scaffold00127 997398 1 G A - ReadM SNP 0033.scaffold00127 997645 1 T A - ReadM INDEL 0033.scaffold00127 998050 1 T . - Both SNP 0033.scaffold00127 998104 1 T A scaffold22640 Both SNP 0033.scaffold00127 998308 1 T C scaffold22640 Both SNP 0033.scaffold00127 998848 1 T G scaffold22640 Both SNP 0033.scaffold00127 998875 1 G A scaffold22640 Both SNP 0033.scaffold00127 998939 1 A C scaffold22640 ReadM SNP 0033.scaffold00127 999040 1 C T - ReadM SNP 0033.scaffold00127 999077 1 C T - ReadM INDEL 0033.scaffold00127 999162 1 . A - Both SNP 0033.scaffold00127 999356 1 G A scaffold22640 Both SNP 0033.scaffold00127 999516 1 T A scaffold22640 ReadM SNP 0033.scaffold00127 999636 1 G T - ReadM SNP 0033.scaffold00127 999780 1 A G - ReadM SNP 0033.scaffold00127 999908 1 A G - ReadM SNP 0033.scaffold00127 1000258 1 G C - ReadM SNP 0033.scaffold00127 1000881 1 T C - ReadM SNP 0033.scaffold00127 1000889 1 A G - ReadM SNP 0033.scaffold00127 1001164 1 T C - ReadM SNP 0033.scaffold00127 1001231 1 G A - ReadM SNP 0033.scaffold00127 1001392 1 C T - Both SNP 0033.scaffold00127 1001999 1 A G scaffold22640 Both SNP 0033.scaffold00127 1002081 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1002209 2 AT GG scaffold22640 Both SNP 0033.scaffold00127 1002265 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1002518 1 A C scaffold22640 Both SNP 0033.scaffold00127 1002526 1 C T scaffold22640 Both SNP 0033.scaffold00127 1002702 1 T C scaffold22640 Both SNP 0033.scaffold00127 1002865 1 T C scaffold22640 Both SNP 0033.scaffold00127 1002910 1 A G scaffold22640 Both SNP 0033.scaffold00127 1003222 1 A G scaffold22640 Both SNP 0033.scaffold00127 1003264 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1003367 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 1003483 1 G A - ReadM SNP 0033.scaffold00127 1003908 1 A G - Both SNP 0033.scaffold00127 1004594 1 T C scaffold22640 Both SNP 0033.scaffold00127 1004604 1 A T scaffold22640 Both SNP 0033.scaffold00127 1004659 1 C T scaffold22640 Both SNP 0033.scaffold00127 1004675 1 C T scaffold22640 Both INDEL 0033.scaffold00127 1004945 1 . A scaffold22640 Both SNP 0033.scaffold00127 1004962 1 A T scaffold22640 Both SNP 0033.scaffold00127 1005015 1 C T scaffold22640 Both SNP 0033.scaffold00127 1005178 1 A G scaffold22640 Both SNP 0033.scaffold00127 1005219 1 C T scaffold22640 Both SNP 0033.scaffold00127 1005278 1 T C scaffold22640 Both INDEL 0033.scaffold00127 1005475 2 GA .. scaffold22640 Both SNP 0033.scaffold00127 1005587 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1006134 1 G C scaffold22640 ScafM INDEL 0033.scaffold00127 1006138 4 TAGA .... scaffold22640 Both INDEL 0033.scaffold00127 1006832 1 . A scaffold22640 Both SNP 0033.scaffold00127 1007793 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1008962 1 C G scaffold22640 ScafM SNP 0033.scaffold00127 1009413 1 C T scaffold22640 ScafM INDEL 0033.scaffold00127 1009454 1 C . scaffold22640 ScafM SNP 0033.scaffold00127 1009456 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1009489 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1009492 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1009509 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1009558 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1009606 1 A G scaffold22640 ScafM INDEL 0033.scaffold00127 1009645 1 . G scaffold22640 ScafM SNP 0033.scaffold00127 1009662 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1009668 2 CC AT scaffold22640 ScafM SNP 0033.scaffold00127 1009686 1 G T scaffold22640 Both SNP 0033.scaffold00127 1009767 1 C T scaffold22640 Both SNP 0033.scaffold00127 1009803 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1009837 1 . T scaffold22640 ScafM INDEL 0033.scaffold00127 1009867 1 T . scaffold22640 ScafM INDEL 0033.scaffold00127 1009879 4 .... ATAT scaffold22640 ScafM SNP 0033.scaffold00127 1009885 2 CG TA scaffold22640 ScafM SNP 0033.scaffold00127 1009954 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1009957 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1009964 1 G A scaffold22640 Both SNP 0033.scaffold00127 1009985 1 G A scaffold22640 Both SNP 0033.scaffold00127 1010056 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1010089 2 GT AA scaffold22640 ScafM SNP 0033.scaffold00127 1010116 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1010138 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1010154 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1010209 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1010221 1 C G scaffold22640 ScafM SNP 0033.scaffold00127 1010238 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1010249 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1010292 1 A C scaffold22640 ScafM SNP 0033.scaffold00127 1010296 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1010338 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1010352 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1010368 2 GT AC scaffold22640 ScafM SNP 0033.scaffold00127 1011003 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1011005 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1011013 2 GC AT scaffold22640 ScafM SNP 0033.scaffold00127 1011037 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1011041 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1011059 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1011523 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1011529 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1011540 1 T A scaffold22640 ReadM SNP 0033.scaffold00127 1012864 1 G A - ReadM SNP 0033.scaffold00127 1012942 1 T C - ReadM SNP 0033.scaffold00127 1013015 1 T G - ReadM SNP 0033.scaffold00127 1013026 1 T C - ReadM SNP 0033.scaffold00127 1013141 1 C A - ReadM SNP 0033.scaffold00127 1013240 1 G A - ReadM SNP 0033.scaffold00127 1013260 1 T G - ReadM SNP 0033.scaffold00127 1013302 1 C A - ReadM SNP 0033.scaffold00127 1013371 1 A T - ReadM SNP 0033.scaffold00127 1013400 1 T C - ReadM SNP 0033.scaffold00127 1013408 1 C G - ReadM INDEL 0033.scaffold00127 1013643 1 C . - ReadM SNP 0033.scaffold00127 1013811 1 T A - ReadM SNP 0033.scaffold00127 1014001 1 A T - ReadM SNP 0033.scaffold00127 1014075 1 T C - ReadM SNP 0033.scaffold00127 1014112 1 T C - ReadM SNP 0033.scaffold00127 1014139 1 C G - ReadM SNP 0033.scaffold00127 1014294 1 G A - ReadM SNP 0033.scaffold00127 1014620 1 G A - ReadM SNP 0033.scaffold00127 1014773 1 T A - ReadM SNP 0033.scaffold00127 1014836 1 T C - ReadM SNP 0033.scaffold00127 1015037 1 T G - ReadM SNP 0033.scaffold00127 1015058 1 G A - ReadM SNP 0033.scaffold00127 1015061 1 C A - ReadM INDEL 0033.scaffold00127 1015183 1 T . - ReadM SNP 0033.scaffold00127 1015193 1 C T - ReadM SNP 0033.scaffold00127 1015210 1 T C - ReadM SNP 0033.scaffold00127 1015396 1 C A - ReadM SNP 0033.scaffold00127 1015411 1 G A - ReadM SNP 0033.scaffold00127 1015764 1 T G - ReadM INDEL 0033.scaffold00127 1015908 1 C . - ReadM SNP 0033.scaffold00127 1016055 1 T G - ReadM SNP 0033.scaffold00127 1016127 1 A C - ReadM INDEL 0033.scaffold00127 1016138 1 . G - ReadM SNP 0033.scaffold00127 1016199 1 C A - ReadM SNP 0033.scaffold00127 1016231 1 C T - ReadM SNP 0033.scaffold00127 1016311 1 G T - ReadM SNP 0033.scaffold00127 1016344 1 A T - ReadM SNP 0033.scaffold00127 1016350 1 T A - ReadM SNP 0033.scaffold00127 1016782 1 G A - ScafM SNP 0033.scaffold00127 1016807 2 CG TA scaffold22640 Both INDEL 0033.scaffold00127 1016983 1 . A scaffold22640 Both SNP 0033.scaffold00127 1016999 1 A G scaffold22640 Both INDEL 0033.scaffold00127 1017086 1 C . scaffold22640 Both SNP 0033.scaffold00127 1017120 1 C T scaffold22640 Both SNP 0033.scaffold00127 1017155 1 A T scaffold22640 Both SNP 0033.scaffold00127 1017164 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1017350 7 ....... AACTAAC scaffold22640 Both SNP 0033.scaffold00127 1017394 1 T A scaffold22640 ScafM SNP 0033.scaffold00127 1017489 2 TA AC scaffold22640 Both SNP 0033.scaffold00127 1017564 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1017622 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1017625 12 ............ CCATTAATACTC scaffold22640 Both INDEL 0033.scaffold00127 1017721 2 TT .. scaffold22640 Both SNP 0033.scaffold00127 1017732 1 G A scaffold22640 Both SNP 0033.scaffold00127 1017794 1 C T scaffold22640 Both INDEL 0033.scaffold00127 1017799 1 A . scaffold22640 Both SNP 0033.scaffold00127 1019325 1 C T scaffold22640 Both SNP 0033.scaffold00127 1019379 1 C T scaffold22640 Both SNP 0033.scaffold00127 1019410 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1019874 1 T A scaffold19764 ScafM SNP 0033.scaffold00127 1019888 1 C A scaffold19764 ScafM SNP 0033.scaffold00127 1019907 3 TTG CAA scaffold19764 ScafM INDEL 0033.scaffold00127 1019928 7 ....... CTAATAA scaffold19764 ScafM SNP 0033.scaffold00127 1019950 1 G A scaffold19764 ScafM INDEL 0033.scaffold00127 1019952 1 . T scaffold19764 ScafM INDEL 0033.scaffold00127 1019967 5 GTTGT ..... scaffold19764 ScafM SNP 0033.scaffold00127 1020012 1 A G scaffold19764 ScafM SNP 0033.scaffold00127 1020017 1 T G scaffold19764 ScafM SNP 0033.scaffold00127 1020028 1 T A scaffold19764 ScafM SNP 0033.scaffold00127 1020043 1 C A scaffold19764 ScafM SNP 0033.scaffold00127 1020051 1 A C scaffold19764 ScafM INDEL 0033.scaffold00127 1020083 1 A . scaffold19764 ScafM SNP 0033.scaffold00127 1020115 2 AA GT scaffold19764 ScafM SNP 0033.scaffold00127 1020125 1 C T scaffold19764 ScafM SNP 0033.scaffold00127 1020130 1 T A scaffold19764 ScafM SNP 0033.scaffold00127 1021200 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1021302 1 T A scaffold22640 ScafM SNP 0033.scaffold00127 1021304 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1021316 2 .. TT scaffold22640 ScafM SNP 0033.scaffold00127 1021324 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1021371 1 A C scaffold22640 ScafM INDEL 0033.scaffold00127 1021423 5 ATAGA ..... scaffold22640 ScafM INDEL 0033.scaffold00127 1021430 3 TGT ... scaffold22640 ScafM SNP 0033.scaffold00127 1021435 1 C T scaffold22640 Both SNP 0033.scaffold00127 1021647 1 C T scaffold22640 ReadM SNP 0033.scaffold00127 1021797 1 C T - ReadM SNP 0033.scaffold00127 1021810 1 C T - ReadM SNP 0033.scaffold00127 1021888 1 A T - ReadM SNP 0033.scaffold00127 1022019 1 T C - ReadM INDEL 0033.scaffold00127 1022110 1 . C - ReadM SNP 0033.scaffold00127 1022143 1 C G - ReadM SNP 0033.scaffold00127 1022187 1 G A - ReadM SNP 0033.scaffold00127 1022234 1 C G - ReadM SNP 0033.scaffold00127 1022293 1 A G - ReadM SNP 0033.scaffold00127 1022366 1 G A - ReadM SNP 0033.scaffold00127 1022396 1 G C - ReadM SNP 0033.scaffold00127 1022400 1 T A - ReadM SNP 0033.scaffold00127 1022500 1 G C - ReadM SNP 0033.scaffold00127 1022553 1 G C - ReadM SNP 0033.scaffold00127 1022783 1 C T - ReadM SNP 0033.scaffold00127 1022786 1 T C - ReadM SNP 0033.scaffold00127 1022812 1 T G - ReadM SNP 0033.scaffold00127 1022947 1 T C - ReadM SNP 0033.scaffold00127 1022985 1 G A - ReadM SNP 0033.scaffold00127 1023094 1 A G - ReadM SNP 0033.scaffold00127 1023147 1 A G - ReadM SNP 0033.scaffold00127 1023259 1 T C - ReadM SNP 0033.scaffold00127 1023264 1 C T - ReadM SNP 0033.scaffold00127 1023276 1 T C - ReadM SNP 0033.scaffold00127 1023306 1 G T - ReadM SNP 0033.scaffold00127 1023326 1 A G - ReadM SNP 0033.scaffold00127 1023390 1 T C - ReadM SNP 0033.scaffold00127 1023394 1 C T - ReadM SNP 0033.scaffold00127 1023491 1 G A - ReadM SNP 0033.scaffold00127 1023548 1 G A - ReadM SNP 0033.scaffold00127 1023586 1 C T - ReadM SNP 0033.scaffold00127 1023613 1 C A - ReadM SNP 0033.scaffold00127 1023748 1 C T - ReadM SNP 0033.scaffold00127 1023773 1 A C - ReadM SNP 0033.scaffold00127 1023812 1 C A - ReadM SNP 0033.scaffold00127 1023903 1 G T - ReadM SNP 0033.scaffold00127 1023933 1 G A - ReadM SNP 0033.scaffold00127 1023950 1 G C - ReadM SNP 0033.scaffold00127 1023988 1 T C - ReadM SNP 0033.scaffold00127 1024024 1 G T - Both SNP 0033.scaffold00127 1024064 1 C G scaffold22640 Both SNP 0033.scaffold00127 1024073 1 A G scaffold22640 Both SNP 0033.scaffold00127 1024088 1 C A scaffold22640 Both SNP 0033.scaffold00127 1024144 1 C G scaffold22640 ReadM SNP 0033.scaffold00127 1024260 1 T C - ReadM SNP 0033.scaffold00127 1024275 1 A C - ReadM SNP 0033.scaffold00127 1024285 1 G A - ReadM SNP 0033.scaffold00127 1024335 1 T G - ReadM SNP 0033.scaffold00127 1024452 1 A T - ReadM SNP 0033.scaffold00127 1024469 1 C T - ReadM SNP 0033.scaffold00127 1024535 1 T C - ReadM SNP 0033.scaffold00127 1024626 1 A C - ReadM SNP 0033.scaffold00127 1024647 1 A G - ReadM SNP 0033.scaffold00127 1024724 1 T C - Both SNP 0033.scaffold00127 1024859 1 T C scaffold22640 Both SNP 0033.scaffold00127 1024981 1 A C scaffold22640 Both SNP 0033.scaffold00127 1024991 1 A G scaffold22640 Both SNP 0033.scaffold00127 1025080 1 G C scaffold22640 ScafM INDEL 0033.scaffold00127 1025124 4 TAGC .... scaffold22640 ScafM SNP 0033.scaffold00127 1025144 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1025164 1 T A scaffold22640 Both SNP 0033.scaffold00127 1025171 1 A G scaffold22640 Both INDEL 0033.scaffold00127 1025198 1 A . scaffold22640 ReadM SNP 0033.scaffold00127 1025306 1 A T - ReadM INDEL 0033.scaffold00127 1025377 1 C . - ScafM SNP 0033.scaffold00127 1025549 1 A G scaffold22640 Both SNP 0033.scaffold00127 1025612 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 1025620 1 T C - ReadM SNP 0033.scaffold00127 1025624 1 G C - ReadM INDEL 0033.scaffold00127 1025684 1 A . - ReadM SNP 0033.scaffold00127 1025706 1 C T - ReadM SNP 0033.scaffold00127 1025735 1 C G - ReadM SNP 0033.scaffold00127 1025746 1 A G - ScafM SNP 0033.scaffold00127 1025797 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1025830 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1025833 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1025843 1 T G scaffold22640 ScafM INDEL 0033.scaffold00127 1025887 1 T . scaffold22640 ScafM INDEL 0033.scaffold00127 1025944 1 . C scaffold22640 ScafM SNP 0033.scaffold00127 1025950 1 T C scaffold22640 Both SNP 0033.scaffold00127 1025993 1 T A scaffold22640 Both INDEL 0033.scaffold00127 1025996 1 . T scaffold22640 Both SNP 0033.scaffold00127 1026050 1 T A scaffold22640 ScafM SNP 0033.scaffold00127 1026113 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1026123 2 GA AT scaffold22640 Both SNP 0033.scaffold00127 1026150 1 G A scaffold22640 Both SNP 0033.scaffold00127 1026239 1 G C scaffold22640 Both SNP 0033.scaffold00127 1026311 1 G A scaffold22640 Both SNP 0033.scaffold00127 1026328 1 T A scaffold22640 Both SNP 0033.scaffold00127 1026361 1 A G scaffold22640 Both SNP 0033.scaffold00127 1026442 1 G A scaffold22640 Both SNP 0033.scaffold00127 1026513 1 T C scaffold22640 Both SNP 0033.scaffold00127 1026532 1 T G scaffold22640 Both SNP 0033.scaffold00127 1026652 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1026693 25 ......................... GCTTGTGAAGTATCAGTGTAGGGTG scaffold22640 Both SNP 0033.scaffold00127 1026724 1 C T scaffold22640 ReadM SNP 0033.scaffold00127 1026784 1 C T - ReadM SNP 0033.scaffold00127 1026794 1 C T - ReadM SNP 0033.scaffold00127 1026813 1 A G - ReadM SNP 0033.scaffold00127 1026865 1 A G - ReadM SNP 0033.scaffold00127 1027013 1 C T - ReadM SNP 0033.scaffold00127 1027220 1 T C - ReadM SNP 0033.scaffold00127 1027281 1 T C - ReadM SNP 0033.scaffold00127 1027292 1 T A - ReadM SNP 0033.scaffold00127 1027326 1 A C - ReadM INDEL 0033.scaffold00127 1027366 1 . T - ReadM SNP 0033.scaffold00127 1027399 1 G A - ReadM SNP 0033.scaffold00127 1027477 1 T A - ReadM SNP 0033.scaffold00127 1027524 1 G A - ReadM INDEL 0033.scaffold00127 1027560 1 A . - ReadM SNP 0033.scaffold00127 1027826 1 A C - ReadM SNP 0033.scaffold00127 1027893 1 A G - ReadM SNP 0033.scaffold00127 1027938 1 G A - ReadM SNP 0033.scaffold00127 1028024 1 G A - ReadM SNP 0033.scaffold00127 1028061 1 C T - ReadM SNP 0033.scaffold00127 1028094 1 G A - ReadM SNP 0033.scaffold00127 1028175 1 G A - ReadM SNP 0033.scaffold00127 1028203 1 G A - ReadM SNP 0033.scaffold00127 1028206 1 G C - ReadM SNP 0033.scaffold00127 1028245 1 C A - ReadM SNP 0033.scaffold00127 1028263 1 G A - ReadM SNP 0033.scaffold00127 1028321 1 C T - ReadM SNP 0033.scaffold00127 1028370 1 T C - ReadM SNP 0033.scaffold00127 1028495 1 G C - ReadM SNP 0033.scaffold00127 1028662 1 T C - ReadM SNP 0033.scaffold00127 1028726 1 T A - Both SNP 0033.scaffold00127 1028935 1 G C scaffold22640 Both SNP 0033.scaffold00127 1028940 1 A G scaffold22640 Both SNP 0033.scaffold00127 1028967 1 G A scaffold22640 Both SNP 0033.scaffold00127 1029028 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1029053 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1029078 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1029080 1 A C scaffold22640 ScafM SNP 0033.scaffold00127 1029098 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1029145 1 T . scaffold22640 Both SNP 0033.scaffold00127 1029173 1 T G scaffold22640 Both SNP 0033.scaffold00127 1029188 1 A G scaffold22640 Both SNP 0033.scaffold00127 1029243 1 A C scaffold22640 Both SNP 0033.scaffold00127 1029312 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 1029317 1 A G - ScafM SNP 0033.scaffold00127 1029478 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1029487 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1029489 1 T A scaffold22640 Both SNP 0033.scaffold00127 1029751 1 G T scaffold22640 Both SNP 0033.scaffold00127 1029801 1 G A scaffold22640 Both SNP 0033.scaffold00127 1029879 1 C T scaffold22640 Both SNP 0033.scaffold00127 1029926 1 A C scaffold22640 Both SNP 0033.scaffold00127 1030000 1 C T scaffold22640 Both SNP 0033.scaffold00127 1030067 1 G A scaffold22640 Both SNP 0033.scaffold00127 1030071 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1030090 1 T C scaffold22640 Both SNP 0033.scaffold00127 1030099 1 G A scaffold22640 Both SNP 0033.scaffold00127 1030176 1 T C scaffold22640 Both SNP 0033.scaffold00127 1030229 1 G A scaffold22640 Both SNP 0033.scaffold00127 1030243 1 A T scaffold22640 Both SNP 0033.scaffold00127 1030497 1 A G scaffold22640 Both SNP 0033.scaffold00127 1030516 1 C T scaffold22640 Both SNP 0033.scaffold00127 1030717 1 C T scaffold22640 Both INDEL 0033.scaffold00127 1030743 1 . A scaffold22640 Both SNP 0033.scaffold00127 1030810 1 A G scaffold22640 Both INDEL 0033.scaffold00127 1030906 1 A . scaffold22640 Both SNP 0033.scaffold00127 1031108 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1031137 3 ... AGA scaffold22640 Both SNP 0033.scaffold00127 1031212 1 T C scaffold22640 ReadM SNP 0033.scaffold00127 1032294 1 C G - ReadM SNP 0033.scaffold00127 1032341 1 T A - ReadM SNP 0033.scaffold00127 1032390 1 C T - ReadM INDEL 0033.scaffold00127 1032580 2 .. AT - ReadM INDEL 0033.scaffold00127 1032581 2 .. TC - ReadM SNP 0033.scaffold00127 1032754 1 T C - ReadM SNP 0033.scaffold00127 1032767 1 C T - ReadM SNP 0033.scaffold00127 1032802 1 C T - ReadM SNP 0033.scaffold00127 1032905 1 C A - ReadM SNP 0033.scaffold00127 1033030 1 C T - ReadM SNP 0033.scaffold00127 1033150 1 C G - ReadM SNP 0033.scaffold00127 1033317 1 A T - ReadM SNP 0033.scaffold00127 1033341 1 G A - ReadM SNP 0033.scaffold00127 1033351 1 A G - ReadM SNP 0033.scaffold00127 1033501 1 G A - ReadM SNP 0033.scaffold00127 1033519 1 T A - Both SNP 0033.scaffold00127 1033600 1 T A scaffold22640 Both INDEL 0033.scaffold00127 1033773 1 T . scaffold22640 Both SNP 0033.scaffold00127 1034055 1 T C scaffold22640 Both SNP 0033.scaffold00127 1034076 1 G A scaffold22640 Both SNP 0033.scaffold00127 1034164 1 T G scaffold22640 Both SNP 0033.scaffold00127 1034192 1 T C scaffold22640 Both SNP 0033.scaffold00127 1034307 1 A G scaffold22640 Both SNP 0033.scaffold00127 1034341 1 T C scaffold22640 Both SNP 0033.scaffold00127 1034415 1 G A scaffold22640 Both SNP 0033.scaffold00127 1034465 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1034538 3 CCC ... scaffold22640 ScafM SNP 0033.scaffold00127 1034547 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1034551 1 C A scaffold22640 Both SNP 0033.scaffold00127 1034745 1 T G scaffold22640 Both SNP 0033.scaffold00127 1034843 1 G A scaffold22640 Both SNP 0033.scaffold00127 1034848 1 C T scaffold22640 Both SNP 0033.scaffold00127 1034853 1 T C scaffold22640 Both SNP 0033.scaffold00127 1035016 1 G T scaffold22640 Both SNP 0033.scaffold00127 1035039 1 A T scaffold22640 Both SNP 0033.scaffold00127 1035122 1 G A scaffold22640 Both SNP 0033.scaffold00127 1035144 1 A G scaffold22640 Both SNP 0033.scaffold00127 1035339 1 A G scaffold22640 Both SNP 0033.scaffold00127 1035382 1 G C scaffold22640 Both SNP 0033.scaffold00127 1035411 1 C G scaffold22640 Both SNP 0033.scaffold00127 1035480 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1035498 1 A T scaffold22640 Both SNP 0033.scaffold00127 1035556 1 T C scaffold22640 Both SNP 0033.scaffold00127 1035598 1 A T scaffold22640 Both SNP 0033.scaffold00127 1035790 1 A T scaffold22640 Both SNP 0033.scaffold00127 1035922 1 C T scaffold22640 Both SNP 0033.scaffold00127 1036048 1 C A scaffold22640 Both SNP 0033.scaffold00127 1036073 1 A G scaffold22640 Both INDEL 0033.scaffold00127 1036277 1 . A scaffold22640 Both SNP 0033.scaffold00127 1036316 1 A G scaffold22640 Both SNP 0033.scaffold00127 1036362 1 G C scaffold22640 Both SNP 0033.scaffold00127 1036378 1 A G scaffold22640 Both SNP 0033.scaffold00127 1036482 1 A G scaffold22640 Both SNP 0033.scaffold00127 1036622 1 G C scaffold22640 Both SNP 0033.scaffold00127 1036706 1 T G scaffold22640 Both INDEL 0033.scaffold00127 1036875 3 ... TTC scaffold22640 ScafM SNP 0033.scaffold00127 1037057 1 T C scaffold22640 Both SNP 0033.scaffold00127 1037119 1 A G scaffold22640 Both SNP 0033.scaffold00127 1037179 1 A G scaffold22640 Both SNP 0033.scaffold00127 1037241 1 G A scaffold22640 Both SNP 0033.scaffold00127 1037536 1 G C scaffold22640 ScafM INDEL 0033.scaffold00127 1037683 2 .. AC scaffold22640 Both SNP 0033.scaffold00127 1037784 1 T C scaffold22640 Both SNP 0033.scaffold00127 1037788 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1037838 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1037859 1 A C scaffold22640 ScafM INDEL 0033.scaffold00127 1037905 3 ... GGC scaffold22640 ScafM SNP 0033.scaffold00127 1037943 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1037955 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1037960 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1038021 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1038032 1 C A scaffold22640 Both SNP 0033.scaffold00127 1038288 1 G A scaffold22640 Both SNP 0033.scaffold00127 1038396 1 A C scaffold22640 ScafM INDEL 0033.scaffold00127 1038412 2 .T AA scaffold22640 Both SNP 0033.scaffold00127 1038433 1 C T scaffold22640 Both SNP 0033.scaffold00127 1038467 1 T G scaffold22640 Both SNP 0033.scaffold00127 1038483 1 C G scaffold22640 ScafM INDEL 0033.scaffold00127 1038648 2 .. TC scaffold22640 Both SNP 0033.scaffold00127 1038743 1 A T scaffold22640 Both SNP 0033.scaffold00127 1038758 1 A G scaffold22640 Both SNP 0033.scaffold00127 1038771 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1040073 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1040126 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1040158 1 A C scaffold22640 ScafM SNP 0033.scaffold00127 1040193 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1040208 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1040210 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1040224 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1040240 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1040252 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1040259 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1040263 1 C . scaffold22640 ScafM SNP 0033.scaffold00127 1040283 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1040291 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1040299 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1040305 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1040307 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1040317 3 TAG ... scaffold22640 ScafM INDEL 0033.scaffold00127 1040322 9 GCGAAAAAT ......... scaffold22640 ScafM INDEL 0033.scaffold00127 1040332 1 G . scaffold22640 ScafM SNP 0033.scaffold00127 1040336 1 C T scaffold22640 ScafM INDEL 0033.scaffold00127 1040350 1 C . scaffold22640 ScafM SNP 0033.scaffold00127 1040363 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1040369 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1040390 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1040400 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1040402 2 AG GA scaffold22640 ScafM SNP 0033.scaffold00127 1040417 1 A G scaffold22640 ScafM INDEL 0033.scaffold00127 1040428 15 ............... GGGGGTGGTCTACGT scaffold22640 ScafM INDEL 0033.scaffold00127 1040432 5 ..... GGGGG scaffold22640 ScafM SNP 0033.scaffold00127 1040481 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1040576 2 .. AG scaffold22640 ScafM SNP 0033.scaffold00127 1040588 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1040591 1 G A scaffold22640 ReadM SNP 0033.scaffold00127 1042251 1 C T - ReadM SNP 0033.scaffold00127 1042288 1 C T - ReadM SNP 0033.scaffold00127 1042581 1 T A - ScafM INDEL 0033.scaffold00127 1042681 3 ... TTT scaffold22640 ScafM INDEL 0033.scaffold00127 1042706 1 . A scaffold22640 ScafM INDEL 0033.scaffold00127 1042717 1 A . scaffold22640 Both SNP 0033.scaffold00127 1042763 1 C T scaffold22640 Both SNP 0033.scaffold00127 1042767 1 T C scaffold22640 Both SNP 0033.scaffold00127 1042819 1 T G scaffold22640 Both SNP 0033.scaffold00127 1042887 1 T C scaffold22640 Both SNP 0033.scaffold00127 1042915 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1042932 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1042947 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1042952 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1042997 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1042999 2 AT .. scaffold22640 ScafM SNP 0033.scaffold00127 1043024 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1043030 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1043033 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1043041 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1043051 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1043059 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1043083 2 .. AA scaffold22640 ScafM SNP 0033.scaffold00127 1043106 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1043117 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1043134 1 . T scaffold22640 ScafM SNP 0033.scaffold00127 1043137 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1043235 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1043259 2 CA TC scaffold22640 ScafM SNP 0033.scaffold00127 1043278 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1043329 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1043390 1 A T scaffold22640 ScafM INDEL 0033.scaffold00127 1043396 1 A . scaffold22640 ScafM SNP 0033.scaffold00127 1043420 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1043422 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1043434 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1043522 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1043836 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1043849 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1043853 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1043858 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1043867 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1043894 1 A . scaffold22640 ScafM SNP 0033.scaffold00127 1043921 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1043943 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1043961 1 A C scaffold22640 ScafM SNP 0033.scaffold00127 1043965 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1043967 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1043996 1 A C scaffold22640 ScafM INDEL 0033.scaffold00127 1044034 1 . A scaffold22640 ScafM SNP 0033.scaffold00127 1044065 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1044132 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1044135 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1044139 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1044169 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1044174 1 A G scaffold22640 Both SNP 0033.scaffold00127 1044209 1 G A scaffold22640 Both SNP 0033.scaffold00127 1044281 1 C T scaffold22640 Both SNP 0033.scaffold00127 1044294 1 T A scaffold22640 Both SNP 0033.scaffold00127 1044354 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1044367 1 T G scaffold22640 ScafM INDEL 0033.scaffold00127 1044389 1 . G scaffold22640 ScafM SNP 0033.scaffold00127 1044398 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1044415 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1044433 1 A T scaffold22640 ScafM SNP 0033.scaffold00127 1044470 1 C G scaffold22640 ScafM SNP 0033.scaffold00127 1044484 1 T C scaffold22640 Both SNP 0033.scaffold00127 1044509 1 T C scaffold22640 Both SNP 0033.scaffold00127 1044599 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1044626 2 GC AT scaffold22640 Both SNP 0033.scaffold00127 1044703 1 C A scaffold22640 Both SNP 0033.scaffold00127 1044721 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1044757 1 A . scaffold22640 ScafM SNP 0033.scaffold00127 1044760 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1044778 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1044796 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1044813 1 C G scaffold22640 ScafM SNP 0033.scaffold00127 1044844 1 T A scaffold22640 ScafM INDEL 0033.scaffold00127 1044854 6 ...... TAAACA scaffold22640 ScafM INDEL 0033.scaffold00127 1044862 6 ...... AAACAC scaffold22640 ScafM SNP 0033.scaffold00127 1044874 1 A C scaffold22640 ScafM SNP 0033.scaffold00127 1044876 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1044889 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1044891 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1044893 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1044930 8 ........ AATTCCAC scaffold22640 ScafM SNP 0033.scaffold00127 1044937 1 A G scaffold22640 ScafM INDEL 0033.scaffold00127 1044958 1 C . scaffold22640 ScafM SNP 0033.scaffold00127 1045038 1 A G scaffold22640 ScafM INDEL 0033.scaffold00127 1045041 8 ACCAAAAT ........ scaffold22640 ScafM SNP 0033.scaffold00127 1045069 1 C G scaffold22640 Both SNP 0033.scaffold00127 1045336 1 G A scaffold22640 Both SNP 0033.scaffold00127 1045339 1 T A scaffold22640 Both SNP 0033.scaffold00127 1045531 1 T C scaffold22640 Both SNP 0033.scaffold00127 1045584 1 G A scaffold22640 Both SNP 0033.scaffold00127 1045591 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1045606 1 T G scaffold22640 ScafM SNP 0033.scaffold00127 1045644 2 TG GA scaffold22640 ScafM INDEL 0033.scaffold00127 1045659 2 .. TG scaffold22640 Both SNP 0033.scaffold00127 1045688 1 C G scaffold22640 Both SNP 0033.scaffold00127 1045698 1 C A scaffold22640 Both SNP 0033.scaffold00127 1045737 1 T C scaffold22640 ScafM INDEL 0033.scaffold00127 1045877 7 ....... CAAGAAA scaffold22640 ReadM SNP 0033.scaffold00127 1046006 1 G T - Both SNP 0033.scaffold00127 1046208 1 C T scaffold22640 Both SNP 0033.scaffold00127 1046571 1 C G scaffold22640 Both SNP 0033.scaffold00127 1046646 1 T C scaffold22640 Both SNP 0033.scaffold00127 1046789 1 A C scaffold22640 Both SNP 0033.scaffold00127 1046901 1 A T scaffold22640 Both SNP 0033.scaffold00127 1046924 1 G T scaffold22640 Both SNP 0033.scaffold00127 1047175 1 C T scaffold22640 Both SNP 0033.scaffold00127 1047193 1 A G scaffold22640 Both SNP 0033.scaffold00127 1047247 1 A C scaffold22640 Both SNP 0033.scaffold00127 1047723 1 T C scaffold22640 Both SNP 0033.scaffold00127 1048023 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1048720 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1048727 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1048736 1 T C scaffold22640 Both SNP 0033.scaffold00127 1048768 1 G T scaffold22640 Both SNP 0033.scaffold00127 1049093 1 T C scaffold22640 Both SNP 0033.scaffold00127 1049356 1 T A scaffold22640 Both SNP 0033.scaffold00127 1049421 1 C T scaffold22640 Both SNP 0033.scaffold00127 1049644 1 C T scaffold22640 Both SNP 0033.scaffold00127 1049657 1 A G scaffold22640 Both SNP 0033.scaffold00127 1049673 1 T A scaffold22640 ReadM INDEL 0033.scaffold00127 1049880 1 . G - ReadM SNP 0033.scaffold00127 1050048 1 C G - ReadM SNP 0033.scaffold00127 1050076 1 C T - ReadM SNP 0033.scaffold00127 1050331 1 C T - ReadM SNP 0033.scaffold00127 1050530 1 G T - ScafM SNP 0033.scaffold00127 1050543 1 G A scaffold22640 Both SNP 0033.scaffold00127 1050550 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1050585 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1050600 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1050606 2 AT GA scaffold22640 ScafM SNP 0033.scaffold00127 1050616 1 A T scaffold22640 Both SNP 0033.scaffold00127 1050663 1 C T scaffold22640 Both SNP 0033.scaffold00127 1050679 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1050811 1 T G scaffold22640 Both SNP 0033.scaffold00127 1050870 1 C G scaffold22640 Both SNP 0033.scaffold00127 1050879 1 G A scaffold22640 Both SNP 0033.scaffold00127 1050920 1 C T scaffold22640 Both SNP 0033.scaffold00127 1051110 1 C T scaffold22640 Both SNP 0033.scaffold00127 1051246 1 A T scaffold22640 Both SNP 0033.scaffold00127 1051584 1 A T scaffold22640 Both INDEL 0033.scaffold00127 1051715 2 TA .. scaffold22640 Both SNP 0033.scaffold00127 1051747 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1051853 2 CA TT scaffold22640 Both SNP 0033.scaffold00127 1051879 1 G T scaffold22640 ScafM INDEL 0033.scaffold00127 1051956 9 CTTTCTTCC ......... scaffold22640 Both SNP 0033.scaffold00127 1052071 1 A C scaffold22640 Both SNP 0033.scaffold00127 1052096 1 C G scaffold22640 Both SNP 0033.scaffold00127 1052195 1 A T scaffold22640 Both SNP 0033.scaffold00127 1052300 1 C T scaffold22640 Both SNP 0033.scaffold00127 1052316 1 A C scaffold22640 Both SNP 0033.scaffold00127 1052367 1 A T scaffold22640 Both SNP 0033.scaffold00127 1052399 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1052463 1 G A scaffold22640 Both SNP 0033.scaffold00127 1052523 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1052570 1 T A scaffold22640 Both SNP 0033.scaffold00127 1052609 1 C T scaffold22640 Both SNP 0033.scaffold00127 1052686 1 A G scaffold22640 Both SNP 0033.scaffold00127 1052788 1 T A scaffold22640 Both SNP 0033.scaffold00127 1052974 1 A C scaffold22640 Both INDEL 0033.scaffold00127 1052978 1 . A scaffold22640 ScafM SNP 0033.scaffold00127 1052988 1 G T scaffold22640 ScafM SNP 0033.scaffold00127 1053015 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1053024 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1053039 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1053047 1 C G scaffold22640 ScafM INDEL 0033.scaffold00127 1053057 4 AAGG .... scaffold22640 ScafM INDEL 0033.scaffold00127 1053062 2 TA .. scaffold22640 ScafM INDEL 0033.scaffold00127 1053066 2 CC .G scaffold22640 ScafM SNP 0033.scaffold00127 1053113 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1053129 1 C T scaffold22640 ScafM INDEL 0033.scaffold00127 1053139 1 A . scaffold22640 ScafM SNP 0033.scaffold00127 1053148 1 C T scaffold22640 ScafM INDEL 0033.scaffold00127 1053180 16 ................ TGTGCTCAAGTAGGGT scaffold22640 ScafM SNP 0033.scaffold00127 1053265 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1053276 2 AT TC scaffold22640 ScafM SNP 0033.scaffold00127 1053281 1 G A scaffold22640 ScafM SNP 0033.scaffold00127 1053302 1 T A scaffold22640 ScafM INDEL 0033.scaffold00127 1053311 1 . A scaffold22640 ScafM SNP 0033.scaffold00127 1053313 2 GA CC scaffold22640 ScafM SNP 0033.scaffold00127 1053316 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1053318 1 T G scaffold22640 ScafM INDEL 0033.scaffold00127 1053322 1 G . scaffold22640 ScafM SNP 0033.scaffold00127 1053330 1 G C scaffold22640 ScafM SNP 0033.scaffold00127 1053367 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1053405 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1053418 1 G C scaffold22640 ScafM INDEL 0033.scaffold00127 1053430 1 G . scaffold22640 ScafM SNP 0033.scaffold00127 1053433 1 A T scaffold22640 ScafM INDEL 0033.scaffold00127 1053452 13 AGTAACGGCATTA ............. scaffold22640 ScafM INDEL 0033.scaffold00127 1053467 1 T . scaffold22640 ScafM SNP 0033.scaffold00127 1053470 1 A G scaffold22640 Both SNP 0033.scaffold00127 1053575 1 A G scaffold22640 Both SNP 0033.scaffold00127 1053718 1 T G scaffold22640 Both SNP 0033.scaffold00127 1053802 1 C T scaffold22640 Both SNP 0033.scaffold00127 1053841 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1054002 3 AAA ... scaffold22640 ScafM SNP 0033.scaffold00127 1054009 1 A G scaffold22640 ScafM SNP 0033.scaffold00127 1054012 1 T A scaffold22640 ScafM SNP 0033.scaffold00127 1054030 2 AT TC scaffold22640 ScafM SNP 0033.scaffold00127 1054050 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1054066 1 T C scaffold22640 ScafM SNP 0033.scaffold00127 1054104 2 AT GA scaffold22640 ScafM SNP 0033.scaffold00127 1054110 1 C A scaffold22640 ScafM SNP 0033.scaffold00127 1054119 1 A T scaffold22640 Both SNP 0033.scaffold00127 1054181 1 G A scaffold22640 Both SNP 0033.scaffold00127 1054260 1 G A scaffold22640 ScafM INDEL 0033.scaffold00127 1054299 6 ...... GATTTT scaffold22640 ScafM SNP 0033.scaffold00127 1054350 1 C T scaffold22640 ScafM SNP 0033.scaffold00127 1054359 1 T A scaffold22640 ScafM SNP 0033.scaffold00127 1054364 2 GT AC scaffold22640 ScafM SNP 0033.scaffold00127 1054385 1 G T scaffold22640 Both INDEL 0033.scaffold00127 1054410 1 . A scaffold22640 ScafM INDEL 0033.scaffold00127 1054510 1 . T scaffold22640 ScafM INDEL 0033.scaffold00127 1054552 1 A . scaffold22640 ScafM INDEL 0033.scaffold00127 1054602 2 .. TA scaffold22640 Both SNP 0033.scaffold00127 1054779 1 T A scaffold22640 ReadM SNP 0033.scaffold00127 1054973 1 G A - ScafM INDEL 0033.scaffold00127 1055086 1 . T scaffold22640 Both SNP 0033.scaffold00127 1055105 1 G T scaffold22640 Both INDEL 0033.scaffold00127 1055109 1 T . scaffold22640 ReadM SNP 0033.scaffold00127 1064806 1 T C - ScafM SNP 0033.scaffold00127 1068853 1 T C scaffold4145 ScafM INDEL 0033.scaffold00127 1068854 1 . C scaffold4145 ScafM SNP 0033.scaffold00127 1071277 1 A G scaffold4145 ScafM SNP 0033.scaffold00127 1071297 1 G A scaffold4145 Both SNP 0033.scaffold00127 1071329 1 C G scaffold4145 Both SNP 0033.scaffold00127 1071445 1 G A scaffold4145 ReadM SNP 0033.scaffold00127 1072111 1 C T - Both SNP 0033.scaffold00127 1072469 1 C T scaffold4145 Both SNP 0033.scaffold00127 1072482 1 C T scaffold4145 ScafM INDEL 0033.scaffold00127 1072637 2 .. AA scaffold4145 Both SNP 0033.scaffold00127 1072791 1 C T scaffold4145 Both SNP 0033.scaffold00127 1073192 1 C T scaffold4145 ScafM INDEL 0033.scaffold00127 1073231 2 TT .. scaffold4145 Both SNP 0033.scaffold00127 1073374 1 G A scaffold4145 Both SNP 0033.scaffold00127 1073491 1 A G scaffold4145 ScafM SNP 0033.scaffold00127 1073936 1 T C scaffold4145 ScafM INDEL 0033.scaffold00127 1073941 6 ...... CCCCCC scaffold4145 ScafM INDEL 0033.scaffold00127 1073950 1 . T scaffold4145 ScafM INDEL 0033.scaffold00127 1074387 1 . T scaffold4145 ReadM INDEL 0033.scaffold00127 1074440 1 . T - Both SNP 0033.scaffold00127 1074505 1 G A scaffold4145 Both SNP 0033.scaffold00127 1074864 1 A C scaffold4145 Both INDEL 0033.scaffold00127 1074883 1 . A scaffold4145 Both SNP 0033.scaffold00127 1075333 1 G A scaffold4145 Both SNP 0033.scaffold00127 1075362 1 A G scaffold4145 ScafM SNP 0033.scaffold00127 1075575 1 G T scaffold4145 ScafM INDEL 0033.scaffold00127 1075600 6 ATAATC ...... scaffold4145 ScafM INDEL 0033.scaffold00127 1075607 9 GGAAAAAGG ......... scaffold4145 Both SNP 0033.scaffold00127 1075910 1 G C scaffold4145 ScafM SNP 0033.scaffold00127 1075921 1 C T scaffold4145 Both SNP 0033.scaffold00127 1076478 1 A G scaffold4145 Both SNP 0033.scaffold00127 1076687 1 T C scaffold4145 Both SNP 0033.scaffold00127 1076758 1 T C scaffold4145 Both SNP 0033.scaffold00127 1076809 1 A G scaffold4145 Both SNP 0033.scaffold00127 1076921 1 T C scaffold4145 Both INDEL 0033.scaffold00127 1076935 1 . T scaffold4145 ScafM INDEL 0033.scaffold00127 1076987 1 T . scaffold4145 ScafM INDEL 0033.scaffold00127 1077041 1 T . scaffold4145 ScafM SNP 0033.scaffold00127 1077045 1 C T scaffold4145 ScafM SNP 0033.scaffold00127 1077118 1 G T scaffold4145 ScafM SNP 0033.scaffold00127 1077128 1 A G scaffold4145 ScafM SNP 0033.scaffold00127 1077188 1 T G scaffold4145 ReadM SNP 0033.scaffold00127 1077566 1 C G - ReadM SNP 0033.scaffold00127 1077614 1 A G - ScafM INDEL 0033.scaffold00127 1089301 14 .............. CTTCTCCAAATTTT scaffold2176 ScafM SNP 0033.scaffold00127 1089418 1 A G scaffold2176 ScafM SNP 0033.scaffold00127 1089445 1 A G scaffold2176 ScafM SNP 0033.scaffold00127 1089495 1 C T scaffold2176 ScafM SNP 0033.scaffold00127 1089599 2 AA TT scaffold2176 ScafM SNP 0033.scaffold00127 1089625 1 A T scaffold2176 ScafM INDEL 0033.scaffold00127 1089645 15 ............... TTATGCTGCCTATAT scaffold2176 ScafM INDEL 0033.scaffold00127 1089646 1 . T scaffold2176 ScafM INDEL 0033.scaffold00127 1089648 3 ... TAT scaffold2176 ScafM INDEL 0033.scaffold00127 1089652 12 ............ TTATCATTCCTC scaffold2176 ReadM SNP 0033.scaffold00127 1089653 1 G A - ScafM INDEL 0033.scaffold00127 1089653 2 .. TA scaffold2176 Both SNP 0033.scaffold00127 1089715 1 A T scaffold2176 Both SNP 0033.scaffold00127 1089789 1 T A scaffold2176 Both SNP 0033.scaffold00127 1089844 1 A T scaffold2176 Both INDEL 0033.scaffold00127 1089897 1 . A scaffold2176 Both SNP 0033.scaffold00127 1089912 1 T C scaffold2176 ReadM SNP 0033.scaffold00127 1090085 1 G A - ScafM SNP 0033.scaffold00127 1090279 1 T G scaffold2176 ReadM SNP 0033.scaffold00127 1091827 1 A C - ScafM SNP 0033.scaffold00127 1091934 1 T G scaffold2176 ReadM SNP 0033.scaffold00127 1092206 1 A G - ReadM SNP 0033.scaffold00127 1092613 1 C T - ReadM SNP 0033.scaffold00127 1092665 1 C T - ReadM SNP 0033.scaffold00127 1092795 1 C T - ReadM SNP 0033.scaffold00127 1093131 1 C T - ScafM SNP 0033.scaffold00127 1093742 1 C T scaffold9462 ScafM SNP 0033.scaffold00127 1093748 1 T A scaffold9462 ScafM SNP 0033.scaffold00127 1093843 1 A G scaffold9462 ScafM SNP 0033.scaffold00127 1093869 1 T A scaffold9462 ReadM SNP 0033.scaffold00127 1097019 1 A G - ReadM SNP 0033.scaffold00127 1097056 1 C T - ReadM SNP 0033.scaffold00127 1097417 1 A G - ReadM SNP 0033.scaffold00127 1097605 1 G A - ScafM SNP 0033.scaffold00127 1097960 1 T A scaffold5428 ReadM SNP 0033.scaffold00127 1098372 2 AA GT - ReadM SNP 0033.scaffold00127 1098412 1 C T - ReadM SNP 0033.scaffold00127 1098903 1 A C - ScafM SNP 0033.scaffold00127 1101085 1 A T scaffold6885 ScafM SNP 0033.scaffold00127 1101100 1 T C scaffold6885 ScafM SNP 0033.scaffold00127 1101133 1 C T scaffold6885 ReadM SNP 0033.scaffold00127 1102356 2 TT CG - ReadM SNP 0033.scaffold00127 1105843 1 T C - ReadM SNP 0033.scaffold00127 1105991 1 T A - ScafM SNP 0033.scaffold00127 1106548 1 C T scaffold4902 ScafM SNP 0033.scaffold00127 1106553 1 G T scaffold4902 ReadM INDEL 0033.scaffold00127 1106848 1 T . - ReadM SNP 0033.scaffold00127 1106970 1 C T - ReadM SNP 0033.scaffold00127 1107113 1 C T - ScafM SNP 0033.scaffold00127 1107961 1 C T scaffold15714 ScafM SNP 0033.scaffold00127 1107997 1 C T scaffold15714 ScafM SNP 0033.scaffold00127 1108078 1 T C scaffold15714 ScafM SNP 0033.scaffold00127 1108178 1 C T scaffold15714 ReadM SNP 0033.scaffold00127 1108509 1 A G - ReadM SNP 0033.scaffold00127 1108530 1 T G - ReadM INDEL 0033.scaffold00127 1108606 1 . C - ReadM SNP 0033.scaffold00127 1108897 1 A G - ReadM SNP 0033.scaffold00127 1108986 1 A G - ReadM SNP 0033.scaffold00127 1109160 1 G A - ScafM SNP 0033.scaffold00127 1109271 1 T A scaffold15714 Both SNP 0033.scaffold00127 1109534 1 C T scaffold15714 Both SNP 0033.scaffold00127 1109636 1 G A scaffold15714 ScafM SNP 0033.scaffold00127 1110027 1 G A scaffold15714 ScafM SNP 0033.scaffold00127 1110130 1 T A scaffold15714 ScafM SNP 0033.scaffold00127 1110153 1 C A scaffold15714 ReadM SNP 0033.scaffold00127 1110323 1 T A - ReadM SNP 0033.scaffold00127 1110607 1 C T - ReadM SNP 0033.scaffold00127 1110652 1 A G - ReadM SNP 0033.scaffold00127 1110747 1 A G - ReadM SNP 0033.scaffold00127 1110810 1 G A - ReadM SNP 0033.scaffold00127 1110880 1 A C - ReadM SNP 0033.scaffold00127 1110901 1 T C - ReadM SNP 0033.scaffold00127 1110903 1 G A - ReadM SNP 0033.scaffold00127 1110950 1 G A - ReadM SNP 0033.scaffold00127 1111019 1 A G - ReadM SNP 0033.scaffold00127 1111058 1 T C - ReadM SNP 0033.scaffold00127 1111107 1 T G - ReadM SNP 0033.scaffold00127 1111149 1 C T - ReadM SNP 0033.scaffold00127 1111164 1 A G - ReadM SNP 0033.scaffold00127 1111274 1 G C - ReadM SNP 0033.scaffold00127 1111298 1 C T - ReadM SNP 0033.scaffold00127 1111349 1 A G - ReadM SNP 0033.scaffold00127 1111383 1 C T - ReadM SNP 0033.scaffold00127 1111460 1 A C - ReadM SNP 0033.scaffold00127 1111479 1 C T - ReadM SNP 0033.scaffold00127 1111598 1 G A - ReadM INDEL 0033.scaffold00127 1111669 1 C . - ReadM SNP 0033.scaffold00127 1111690 1 T C - ReadM SNP 0033.scaffold00127 1111800 1 A G - ReadM SNP 0033.scaffold00127 1111842 1 C T - ReadM SNP 0033.scaffold00127 1111866 1 C A - ReadM SNP 0033.scaffold00127 1111912 1 A G - ReadM SNP 0033.scaffold00127 1111940 1 G A - ReadM SNP 0033.scaffold00127 1111995 1 A G - ReadM SNP 0033.scaffold00127 1112132 1 G C - ReadM SNP 0033.scaffold00127 1112173 1 T A - ReadM SNP 0033.scaffold00127 1112210 1 G A - ReadM SNP 0033.scaffold00127 1112236 1 T C - ReadM SNP 0033.scaffold00127 1112302 1 T C - ReadM SNP 0033.scaffold00127 1112331 1 G A - ReadM SNP 0033.scaffold00127 1112407 1 G T - ReadM SNP 0033.scaffold00127 1112508 1 C G - ReadM SNP 0033.scaffold00127 1112529 1 C T - ReadM SNP 0033.scaffold00127 1112589 1 T C - ReadM SNP 0033.scaffold00127 1112644 1 G A - ReadM SNP 0033.scaffold00127 1112966 1 A G - ReadM SNP 0033.scaffold00127 1113026 1 C G - Both SNP 0033.scaffold00127 1113203 1 A T scaffold15714 Both SNP 0033.scaffold00127 1113205 1 G T scaffold15714 Both SNP 0033.scaffold00127 1113260 1 T G scaffold15714 ReadM SNP 0033.scaffold00127 1113354 1 A C - ReadM SNP 0033.scaffold00127 1113378 1 G A - ReadM SNP 0033.scaffold00127 1113664 1 G A - ReadM SNP 0033.scaffold00127 1113753 1 T A - ReadM SNP 0033.scaffold00127 1113889 1 A G - ReadM SNP 0033.scaffold00127 1113894 1 T C - ReadM INDEL 0033.scaffold00127 1114005 1 . G - ReadM SNP 0033.scaffold00127 1114100 1 T C - ReadM SNP 0033.scaffold00127 1114154 1 G A - ReadM SNP 0033.scaffold00127 1114197 1 T C - ReadM SNP 0033.scaffold00127 1114246 1 A G - ReadM SNP 0034.scaffold00131 574 1 C T - ReadM SNP 0034.scaffold00131 638 1 G T - ReadM SNP 0034.scaffold00131 841 1 G A - ReadM SNP 0034.scaffold00131 872 1 T G - ReadM SNP 0034.scaffold00131 911 1 C T - ReadM SNP 0034.scaffold00131 933 1 T G - ReadM SNP 0034.scaffold00131 953 1 A C - ReadM SNP 0034.scaffold00131 1025 1 G C - ReadM SNP 0034.scaffold00131 1658 1 C T - ReadM SNP 0034.scaffold00131 1712 1 A T - ReadM SNP 0034.scaffold00131 1735 1 A G - ReadM SNP 0034.scaffold00131 1752 1 C T - ReadM SNP 0034.scaffold00131 1781 1 G T - ReadM SNP 0034.scaffold00131 1818 1 T A - ReadM INDEL 0034.scaffold00131 1877 1 . C - ReadM SNP 0034.scaffold00131 1904 1 T C - ReadM SNP 0034.scaffold00131 1939 1 C T - ReadM SNP 0034.scaffold00131 2029 1 C T - ReadM SNP 0034.scaffold00131 2113 1 T C - ReadM SNP 0034.scaffold00131 2123 1 C G - ReadM SNP 0034.scaffold00131 2313 1 G C - ReadM SNP 0034.scaffold00131 2326 1 C T - ReadM SNP 0034.scaffold00131 2331 1 T G - ReadM SNP 0034.scaffold00131 2380 1 G A - ReadM SNP 0034.scaffold00131 2443 1 T C - ReadM SNP 0034.scaffold00131 2478 1 C T - ReadM SNP 0034.scaffold00131 2500 1 A G - ReadM SNP 0034.scaffold00131 2745 1 C T - ReadM SNP 0034.scaffold00131 2842 1 C T - ReadM SNP 0034.scaffold00131 2927 1 C T - ReadM SNP 0034.scaffold00131 2946 1 T G - ReadM SNP 0034.scaffold00131 3037 1 A C - ReadM SNP 0034.scaffold00131 3044 1 C G - ReadM SNP 0034.scaffold00131 3140 1 G A - ReadM SNP 0034.scaffold00131 3153 1 G T - ReadM SNP 0034.scaffold00131 3170 1 T C - ReadM SNP 0034.scaffold00131 3240 1 T G - ReadM SNP 0034.scaffold00131 3630 1 C T - ReadM SNP 0034.scaffold00131 3640 1 A C - ReadM SNP 0034.scaffold00131 3788 1 C T - ReadM SNP 0034.scaffold00131 3790 1 A G - ReadM SNP 0034.scaffold00131 3856 1 C T - ReadM SNP 0034.scaffold00131 3871 1 G T - ReadM SNP 0034.scaffold00131 3972 1 A G - ReadM SNP 0034.scaffold00131 4051 1 G C - ReadM SNP 0034.scaffold00131 4057 1 G A - ReadM SNP 0034.scaffold00131 4143 1 G A - ReadM SNP 0034.scaffold00131 4256 1 G C - ReadM SNP 0034.scaffold00131 4296 1 T C - ReadM SNP 0034.scaffold00131 4350 1 C G - ReadM SNP 0034.scaffold00131 4372 1 G A - ReadM SNP 0034.scaffold00131 4414 1 C T - ReadM SNP 0034.scaffold00131 4490 1 C T - ReadM SNP 0034.scaffold00131 4636 1 A T - ReadM INDEL 0034.scaffold00131 4684 1 . A - ReadM SNP 0034.scaffold00131 4702 1 C T - ReadM SNP 0034.scaffold00131 4770 1 C T - ReadM SNP 0034.scaffold00131 4869 1 A C - ReadM SNP 0034.scaffold00131 4922 1 G A - Both SNP 0034.scaffold00131 4999 1 A C scaffold926 Both SNP 0034.scaffold00131 5021 1 T G scaffold926 Both SNP 0034.scaffold00131 5045 1 T G scaffold926 Both SNP 0034.scaffold00131 5100 1 A G scaffold926 Both SNP 0034.scaffold00131 5111 1 A G scaffold926 Both SNP 0034.scaffold00131 5134 1 G A scaffold926 Both SNP 0034.scaffold00131 5180 1 A T scaffold926 Both SNP 0034.scaffold00131 5184 1 A G scaffold926 ReadM SNP 0034.scaffold00131 5226 1 G A - ReadM SNP 0034.scaffold00131 5289 1 A G - ReadM SNP 0034.scaffold00131 5364 1 A G - ReadM INDEL 0034.scaffold00131 5429 1 . G - ReadM SNP 0034.scaffold00131 5465 1 G A - ReadM SNP 0034.scaffold00131 5488 1 C T - ReadM SNP 0034.scaffold00131 5533 1 A G - ReadM SNP 0034.scaffold00131 5547 1 A T - Both SNP 0034.scaffold00131 5625 1 T C scaffold926 Both SNP 0034.scaffold00131 5631 1 T C scaffold926 Both SNP 0034.scaffold00131 5638 1 T G scaffold926 Both SNP 0034.scaffold00131 5684 1 C T scaffold926 Both SNP 0034.scaffold00131 5694 1 A T scaffold926 Both SNP 0034.scaffold00131 5726 1 A G scaffold926 ScafM SNP 0034.scaffold00131 5778 1 T C scaffold926 ScafM SNP 0034.scaffold00131 5780 1 A G scaffold926 Both SNP 0034.scaffold00131 5808 1 A T scaffold926 Both SNP 0034.scaffold00131 5865 1 A T scaffold926 Both SNP 0034.scaffold00131 5950 1 A G scaffold926 Both SNP 0034.scaffold00131 5982 1 T C scaffold926 Both INDEL 0034.scaffold00131 6031 3 CTG ... scaffold926 Both SNP 0034.scaffold00131 6100 1 A G scaffold926 Both SNP 0034.scaffold00131 6140 1 A G scaffold926 ScafM SNP 0034.scaffold00131 6188 1 A G scaffold926 ScafM SNP 0034.scaffold00131 6194 1 G T scaffold926 ScafM SNP 0034.scaffold00131 6200 1 G A scaffold926 ScafM SNP 0034.scaffold00131 6208 1 C G scaffold926 ScafM SNP 0034.scaffold00131 6222 1 T G scaffold926 Both SNP 0034.scaffold00131 6277 1 T C scaffold926 Both SNP 0034.scaffold00131 6297 1 A C scaffold926 ScafM SNP 0034.scaffold00131 6322 1 G C scaffold926 ScafM SNP 0034.scaffold00131 6331 1 A T scaffold926 ScafM SNP 0034.scaffold00131 6334 1 C T scaffold926 ScafM SNP 0034.scaffold00131 6339 1 G C scaffold926 ScafM INDEL 0034.scaffold00131 6352 3 ... GCT scaffold926 ScafM INDEL 0034.scaffold00131 6353 1 . G scaffold926 Both SNP 0034.scaffold00131 6423 1 C A scaffold926 Both SNP 0034.scaffold00131 6438 1 T A scaffold926 Both SNP 0034.scaffold00131 6488 1 T G scaffold926 Both SNP 0034.scaffold00131 6668 1 T C scaffold926 ScafM SNP 0034.scaffold00131 6684 1 G C scaffold926 Both SNP 0034.scaffold00131 6707 1 T G scaffold926 Both INDEL 0034.scaffold00131 6731 1 . T scaffold926 Both SNP 0034.scaffold00131 6843 1 A G scaffold926 Both SNP 0034.scaffold00131 6863 1 A G scaffold926 Both SNP 0034.scaffold00131 6875 1 T C scaffold926 Both SNP 0034.scaffold00131 7017 1 T C scaffold926 Both SNP 0034.scaffold00131 7098 1 A C scaffold926 Both SNP 0034.scaffold00131 7171 1 A G scaffold926 ScafM SNP 0034.scaffold00131 7260 1 C A scaffold926 ScafM INDEL 0034.scaffold00131 7280 29 ............................. CAAAAAAAAAAAAAAAAACAAAAAAAAAA scaffold926 ScafM SNP 0034.scaffold00131 7281 1 T A scaffold926 ScafM SNP 0034.scaffold00131 7328 1 C T scaffold926 ScafM SNP 0034.scaffold00131 7531 1 T C scaffold926 ReadM SNP 0034.scaffold00131 33795 1 T G - ReadM SNP 0034.scaffold00131 34106 1 A T - ReadM SNP 0034.scaffold00131 34323 1 T C - ReadM SNP 0034.scaffold00131 34792 1 C T - ReadM SNP 0034.scaffold00131 34814 1 G C - Both SNP 0034.scaffold00131 35381 1 G A scaffold13700 Both SNP 0034.scaffold00131 35457 1 A T scaffold13700 Both SNP 0034.scaffold00131 35550 1 G A scaffold13700 Both SNP 0034.scaffold00131 35680 1 T G scaffold13700 ScafM SNP 0034.scaffold00131 36053 2 AT GC scaffold13700 Both SNP 0034.scaffold00131 36096 1 A T scaffold13700 ScafM SNP 0034.scaffold00131 36123 1 G A scaffold13700 Both INDEL 0034.scaffold00131 36278 1 T . scaffold13700 ScafM INDEL 0034.scaffold00131 36402 3 CAT ... scaffold13700 ScafM INDEL 0034.scaffold00131 36406 2 CA .. scaffold13700 ScafM INDEL 0034.scaffold00131 36409 8 AAAACCTT ........ scaffold13700 ScafM INDEL 0034.scaffold00131 36633 11 ........... GTCTTTTTTTT scaffold13700 Both SNP 0034.scaffold00131 36840 1 G A scaffold13700 Both SNP 0034.scaffold00131 36946 1 G A scaffold13700 Both SNP 0034.scaffold00131 36991 1 A T scaffold13700 ScafM SNP 0034.scaffold00131 37205 1 A G scaffold13700 ScafM SNP 0034.scaffold00131 37225 1 T C scaffold13700 Both SNP 0034.scaffold00131 37387 1 G T scaffold13700 Both SNP 0034.scaffold00131 37431 1 C T scaffold13700 Both SNP 0034.scaffold00131 37487 1 T G scaffold13700 Both SNP 0034.scaffold00131 37563 1 C A scaffold13700 Both SNP 0034.scaffold00131 37716 1 T C scaffold13700 Both SNP 0034.scaffold00131 37737 1 T G scaffold13700 ScafM INDEL 0034.scaffold00131 37811 1 . A scaffold13700 ScafM SNP 0034.scaffold00131 37816 1 C A scaffold13700 ScafM SNP 0034.scaffold00131 37822 1 T A scaffold13700 ReadM SNP 0034.scaffold00131 37899 1 T A - ReadM SNP 0034.scaffold00131 37910 1 A G - ReadM SNP 0034.scaffold00131 38052 1 G A - ReadM SNP 0034.scaffold00131 38089 1 G A - ReadM SNP 0034.scaffold00131 38162 1 G A - ScafM INDEL 0034.scaffold00131 48614 7 AAAACCG ....... scaffold926 ScafM SNP 0034.scaffold00131 48627 1 G C scaffold926 ScafM SNP 0034.scaffold00131 48679 1 G A scaffold926 ScafM SNP 0034.scaffold00131 48778 1 C T scaffold926 ScafM SNP 0034.scaffold00131 48791 1 G A scaffold926 ScafM SNP 0034.scaffold00131 48817 1 C T scaffold926 ScafM INDEL 0034.scaffold00131 48822 3 ... GTT scaffold926 ScafM SNP 0034.scaffold00131 48838 1 A G scaffold926 ScafM SNP 0034.scaffold00131 48895 1 T C scaffold926 ScafM SNP 0034.scaffold00131 48906 1 A C scaffold926 ScafM SNP 0034.scaffold00131 48916 1 C T scaffold926 ScafM SNP 0034.scaffold00131 48932 1 T C scaffold926 ScafM SNP 0034.scaffold00131 48979 1 C T scaffold926 ScafM SNP 0034.scaffold00131 49013 2 CA GG scaffold926 ScafM SNP 0034.scaffold00131 49043 1 A G scaffold926 ScafM SNP 0034.scaffold00131 49081 1 T C scaffold926 ScafM INDEL 0034.scaffold00131 49110 50 AAGGTTGATTATGAAATTATGATATTAGTTGATGCTATGGATATTAATTG .................................................. scaffold926 Both SNP 0034.scaffold00131 49216 1 A G scaffold926 ReadM SNP 0034.scaffold00131 49270 1 T C - Both SNP 0034.scaffold00131 49356 1 C A scaffold926 ScafM SNP 0034.scaffold00131 49421 1 A G scaffold926 ScafM SNP 0034.scaffold00131 49442 1 A G scaffold926 ScafM SNP 0034.scaffold00131 49965 1 A C scaffold926 ScafM SNP 0034.scaffold00131 49999 1 C T scaffold926 ScafM SNP 0034.scaffold00131 50085 1 C T scaffold926 ScafM SNP 0034.scaffold00131 50131 1 G T scaffold926 ScafM SNP 0034.scaffold00131 50135 1 C T scaffold926 ScafM SNP 0034.scaffold00131 50876 1 T G scaffold926 ScafM SNP 0034.scaffold00131 50895 1 C T scaffold926 ReadM SNP 0034.scaffold00131 51254 1 A G - ReadM SNP 0034.scaffold00131 51332 1 C A - ReadM SNP 0034.scaffold00131 51587 1 C G - ReadM SNP 0034.scaffold00131 51591 1 T C - ReadM SNP 0034.scaffold00131 51621 1 T A - ReadM SNP 0034.scaffold00131 51720 1 G A - ReadM SNP 0034.scaffold00131 51732 1 A C - ReadM SNP 0034.scaffold00131 51785 1 G T - ReadM SNP 0034.scaffold00131 51963 1 T C - ReadM SNP 0034.scaffold00131 51968 1 G A - ReadM SNP 0034.scaffold00131 52329 1 C T - ReadM SNP 0034.scaffold00131 52522 1 T C - Both SNP 0034.scaffold00131 52566 1 A G scaffold926 Both SNP 0034.scaffold00131 52584 1 T C scaffold926 Both SNP 0034.scaffold00131 52620 1 C T scaffold926 Both SNP 0034.scaffold00131 52644 1 A G scaffold926 Both SNP 0034.scaffold00131 52647 1 A C scaffold926 Both SNP 0034.scaffold00131 52740 1 A G scaffold926 Both SNP 0034.scaffold00131 52754 1 C T scaffold926 Both SNP 0034.scaffold00131 52805 1 T C scaffold926 Both SNP 0034.scaffold00131 53043 1 C T scaffold926 Both SNP 0034.scaffold00131 53091 1 G A scaffold926 Both SNP 0034.scaffold00131 53147 1 C A scaffold926 ScafM SNP 0034.scaffold00131 53152 1 G A scaffold926 ScafM SNP 0034.scaffold00131 53195 1 A G scaffold926 Both SNP 0034.scaffold00131 53219 1 C T scaffold926 ScafM SNP 0034.scaffold00131 53276 1 T G scaffold926 ScafM SNP 0034.scaffold00131 53353 1 C A scaffold926 ScafM SNP 0034.scaffold00131 53420 1 A G scaffold926 ScafM SNP 0034.scaffold00131 53423 1 A G scaffold926 ReadM SNP 0034.scaffold00131 53655 1 T C - ReadM SNP 0034.scaffold00131 53662 1 T C - ReadM SNP 0034.scaffold00131 53686 1 G T - ReadM SNP 0034.scaffold00131 53726 1 G A - ReadM SNP 0034.scaffold00131 53743 1 C T - ReadM SNP 0034.scaffold00131 53799 1 G C - ReadM SNP 0034.scaffold00131 53853 1 A T - ReadM SNP 0034.scaffold00131 53868 1 C A - ReadM SNP 0034.scaffold00131 54233 1 T C - ReadM SNP 0034.scaffold00131 54303 1 T A - ScafM SNP 0034.scaffold00131 54362 1 G A scaffold926 ScafM INDEL 0034.scaffold00131 54365 1 A . scaffold926 ScafM SNP 0034.scaffold00131 54376 1 G A scaffold926 ScafM SNP 0034.scaffold00131 54382 1 G C scaffold926 Both SNP 0034.scaffold00131 54429 1 T C scaffold926 Both SNP 0034.scaffold00131 54449 1 G A scaffold926 Both SNP 0034.scaffold00131 54484 1 A T scaffold926 Both SNP 0034.scaffold00131 54550 1 C G scaffold926 Both SNP 0034.scaffold00131 54568 1 T C scaffold926 Both SNP 0034.scaffold00131 54589 1 C T scaffold926 Both SNP 0034.scaffold00131 54607 1 A T scaffold926 ScafM SNP 0034.scaffold00131 54683 1 G A scaffold926 ScafM SNP 0034.scaffold00131 54840 1 A T scaffold926 ScafM SNP 0034.scaffold00131 54846 2 CG TA scaffold926 ScafM SNP 0034.scaffold00131 54872 1 G A scaffold926 ScafM SNP 0034.scaffold00131 54886 1 C G scaffold926 Both SNP 0034.scaffold00131 54914 1 G A scaffold926 Both SNP 0034.scaffold00131 54939 1 C G scaffold926 Both SNP 0034.scaffold00131 54978 1 G A scaffold926 Both SNP 0034.scaffold00131 55092 1 G A scaffold926 Both SNP 0034.scaffold00131 55232 2 CA TG scaffold926 Both SNP 0034.scaffold00131 55346 1 C T scaffold926 ScafM SNP 0034.scaffold00131 55369 1 T C scaffold926 Both SNP 0034.scaffold00131 55546 1 T C scaffold926 Both SNP 0034.scaffold00131 55581 1 T G scaffold926 Both SNP 0034.scaffold00131 55583 1 T C scaffold926 Both SNP 0034.scaffold00131 55719 1 T G scaffold926 ScafM INDEL 0034.scaffold00131 55726 1 . G scaffold926 ScafM SNP 0034.scaffold00131 55728 1 G T scaffold926 Both SNP 0034.scaffold00131 55751 1 G A scaffold926 Both SNP 0034.scaffold00131 55880 1 A G scaffold926 ScafM SNP 0034.scaffold00131 55996 1 C T scaffold926 ScafM SNP 0034.scaffold00131 56054 1 A G scaffold926 Both SNP 0034.scaffold00131 56154 1 G A scaffold926 Both SNP 0034.scaffold00131 56192 1 G A scaffold926 Both SNP 0034.scaffold00131 56195 1 G A scaffold926 Both SNP 0034.scaffold00131 56222 1 T C scaffold926 Both SNP 0034.scaffold00131 56233 1 G T scaffold926 Both SNP 0034.scaffold00131 56323 1 T C scaffold926 Both SNP 0034.scaffold00131 56327 1 G A scaffold926 ReadM SNP 0034.scaffold00131 56374 1 C A - ReadM SNP 0034.scaffold00131 56392 1 A C - ReadM SNP 0034.scaffold00131 56420 1 C T - ReadM SNP 0034.scaffold00131 56531 1 T G - ReadM SNP 0034.scaffold00131 56705 1 C A - ReadM SNP 0034.scaffold00131 56715 1 G A - ReadM SNP 0034.scaffold00131 56794 1 T C - Both SNP 0034.scaffold00131 56826 1 G A scaffold926 Both SNP 0034.scaffold00131 56843 1 T A scaffold926 Both SNP 0034.scaffold00131 56857 1 A G scaffold926 Both SNP 0034.scaffold00131 57002 1 T C scaffold926 Both SNP 0034.scaffold00131 57047 1 C T scaffold926 Both SNP 0034.scaffold00131 57060 1 T C scaffold926 Both SNP 0034.scaffold00131 57072 1 T C scaffold926 ScafM SNP 0034.scaffold00131 57129 1 C A scaffold926 ScafM SNP 0034.scaffold00131 57143 1 C T scaffold926 ScafM SNP 0034.scaffold00131 57149 1 T C scaffold926 ScafM SNP 0034.scaffold00131 57151 1 T C scaffold926 Both SNP 0034.scaffold00131 57232 1 T C scaffold926 Both SNP 0034.scaffold00131 57238 1 C T scaffold926 Both SNP 0034.scaffold00131 57276 1 A G scaffold926 Both SNP 0034.scaffold00131 57362 1 G A scaffold926 Both SNP 0034.scaffold00131 57457 1 T C scaffold926 Both SNP 0034.scaffold00131 57588 1 G A scaffold926 ScafM INDEL 0034.scaffold00131 57642 1 A . scaffold926 ScafM INDEL 0034.scaffold00131 57653 1 A . scaffold926 Both SNP 0034.scaffold00131 57881 1 C T scaffold926 Both SNP 0034.scaffold00131 57913 1 G T scaffold926 Both SNP 0034.scaffold00131 57930 1 G T scaffold926 ScafM SNP 0034.scaffold00131 57966 1 A C scaffold926 ScafM SNP 0034.scaffold00131 57991 1 T C scaffold926 ScafM SNP 0034.scaffold00131 57994 2 AA GT scaffold926 Both SNP 0034.scaffold00131 58022 1 A C scaffold926 Both SNP 0034.scaffold00131 58092 1 A G scaffold926 ReadM SNP 0034.scaffold00131 58181 1 G A - ScafM SNP 0034.scaffold00131 58312 1 T G scaffold926 ScafM SNP 0034.scaffold00131 58353 1 G A scaffold926 Both SNP 0034.scaffold00131 58368 1 T C scaffold926 ScafM SNP 0034.scaffold00131 58474 2 TA CC scaffold926 ReadM SNP 0034.scaffold00131 58591 1 G A - ReadM SNP 0034.scaffold00131 58596 1 G A - ReadM SNP 0034.scaffold00131 58600 1 G A - Both SNP 0034.scaffold00131 58687 1 G A scaffold926 ScafM SNP 0034.scaffold00131 58703 1 A T scaffold926 Both SNP 0034.scaffold00131 58709 1 T A scaffold926 Both SNP 0034.scaffold00131 58882 1 A C scaffold926 Both SNP 0034.scaffold00131 58978 1 A C scaffold926 Both SNP 0034.scaffold00131 58992 1 C T scaffold926 Both SNP 0034.scaffold00131 59114 1 A G scaffold926 Both SNP 0034.scaffold00131 59116 1 A T scaffold926 Both SNP 0034.scaffold00131 59167 1 T C scaffold926 Both SNP 0034.scaffold00131 59190 1 T A scaffold926 Both SNP 0034.scaffold00131 59230 1 A C scaffold926 Both SNP 0034.scaffold00131 59240 1 A G scaffold926 Both SNP 0034.scaffold00131 59312 1 C T scaffold926 ScafM INDEL 0034.scaffold00131 59427 3 ... AAA scaffold926 ScafM SNP 0034.scaffold00131 59446 2 GC AT scaffold926 Both SNP 0034.scaffold00131 59464 1 T C scaffold926 ReadM SNP 0034.scaffold00131 59554 1 T A - ReadM SNP 0034.scaffold00131 59587 1 A G - ReadM SNP 0034.scaffold00131 59635 1 A G - ReadM SNP 0034.scaffold00131 59649 1 G T - ReadM SNP 0034.scaffold00131 60196 1 A C - ReadM SNP 0034.scaffold00131 60257 1 G C - ReadM SNP 0034.scaffold00131 60318 1 C A - ReadM SNP 0034.scaffold00131 60321 1 C T - ReadM SNP 0034.scaffold00131 60434 1 G A - ReadM SNP 0034.scaffold00131 60452 1 C A - ReadM SNP 0034.scaffold00131 60576 1 G A - ScafM SNP 0034.scaffold00131 60631 1 T G scaffold926 Both SNP 0034.scaffold00131 60651 1 G A scaffold926 Both SNP 0034.scaffold00131 60690 1 G A scaffold926 ScafM SNP 0034.scaffold00131 60711 1 T C scaffold926 ScafM SNP 0034.scaffold00131 60718 1 T G scaffold926 ScafM SNP 0034.scaffold00131 60751 1 C G scaffold926 Both SNP 0034.scaffold00131 60792 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 60877 15 GGGAGGGCTGGTCTG ............... scaffold926 ScafM INDEL 0034.scaffold00131 60893 9 TGTGGGTTG ......... scaffold926 ReadM SNP 0034.scaffold00131 60901 1 G A - Both SNP 0034.scaffold00131 60915 1 A G scaffold926 ReadM SNP 0034.scaffold00131 61208 1 A G - ScafM INDEL 0034.scaffold00131 61322 2 .C AA scaffold926 ScafM INDEL 0034.scaffold00131 61336 1 . A scaffold926 ScafM INDEL 0034.scaffold00131 61345 2 .. TA scaffold926 ReadM SNP 0034.scaffold00131 61518 1 C A - ScafM SNP 0034.scaffold00131 61573 1 C A scaffold926 ScafM SNP 0034.scaffold00131 61578 2 TT AC scaffold926 Both SNP 0034.scaffold00131 61609 1 T A scaffold926 Both SNP 0034.scaffold00131 61635 1 A G scaffold926 Both SNP 0034.scaffold00131 61792 1 T G scaffold926 Both SNP 0034.scaffold00131 61809 1 T C scaffold926 Both SNP 0034.scaffold00131 61819 1 G C scaffold926 Both INDEL 0034.scaffold00131 61845 1 A . scaffold926 ScafM SNP 0034.scaffold00131 61967 2 CT AG scaffold926 Both SNP 0034.scaffold00131 61985 1 G A scaffold926 ReadM SNP 0034.scaffold00131 62060 1 A G - ReadM INDEL 0034.scaffold00131 62075 1 . G - ReadM SNP 0034.scaffold00131 62086 1 T C - ReadM INDEL 0034.scaffold00131 62250 1 T . - ReadM SNP 0034.scaffold00131 62294 1 T A - ReadM INDEL 0034.scaffold00131 62323 1 . C - ReadM SNP 0034.scaffold00131 62354 1 T C - ScafM SNP 0034.scaffold00131 62412 1 C T scaffold926 Both SNP 0034.scaffold00131 62486 1 A G scaffold926 Both SNP 0034.scaffold00131 62500 1 A G scaffold926 Both SNP 0034.scaffold00131 62564 1 C T scaffold926 Both INDEL 0034.scaffold00131 62595 1 . G scaffold926 Both SNP 0034.scaffold00131 62677 1 T G scaffold926 Both INDEL 0034.scaffold00131 62756 2 .. AA scaffold926 Both SNP 0034.scaffold00131 62786 1 C T scaffold926 Both INDEL 0034.scaffold00131 62794 1 A . scaffold926 Both SNP 0034.scaffold00131 62846 1 C T scaffold926 Both SNP 0034.scaffold00131 62953 1 G T scaffold926 Both SNP 0034.scaffold00131 62975 1 T C scaffold926 Both SNP 0034.scaffold00131 63010 1 C T scaffold926 Both SNP 0034.scaffold00131 63086 1 C T scaffold926 Both SNP 0034.scaffold00131 63205 1 C T scaffold926 Both SNP 0034.scaffold00131 63250 1 C G scaffold926 Both SNP 0034.scaffold00131 63254 1 C T scaffold926 ReadM SNP 0034.scaffold00131 63338 1 T C - ReadM SNP 0034.scaffold00131 63378 1 A T - ReadM SNP 0034.scaffold00131 63445 1 G A - ReadM SNP 0034.scaffold00131 63457 1 C T - Both SNP 0034.scaffold00131 63633 1 C T scaffold926 ScafM SNP 0034.scaffold00131 63651 2 CC TA scaffold926 ReadM SNP 0034.scaffold00131 63803 1 T C - ReadM SNP 0034.scaffold00131 63847 1 A T - ScafM SNP 0034.scaffold00131 64012 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 64024 6 TTTCTA ...... scaffold926 ScafM SNP 0034.scaffold00131 64154 2 GC AG scaffold926 ScafM SNP 0034.scaffold00131 64264 1 C T scaffold926 Both SNP 0034.scaffold00131 64415 1 T C scaffold926 ScafM SNP 0034.scaffold00131 64437 1 T C scaffold926 ReadM SNP 0034.scaffold00131 64577 1 A T - Both SNP 0034.scaffold00131 64808 2 AA GG scaffold926 Both SNP 0034.scaffold00131 64858 1 T C scaffold926 Both INDEL 0034.scaffold00131 64870 1 T . scaffold926 ReadM SNP 0034.scaffold00131 65086 1 C T - ReadM SNP 0034.scaffold00131 65183 1 T C - ReadM SNP 0034.scaffold00131 65273 1 C T - ReadM SNP 0034.scaffold00131 65289 1 A T - Both SNP 0034.scaffold00131 65669 1 A G scaffold926 Both SNP 0034.scaffold00131 65678 1 T A scaffold926 Both SNP 0034.scaffold00131 65749 1 C T scaffold926 Both SNP 0034.scaffold00131 65783 1 C T scaffold926 Both SNP 0034.scaffold00131 65860 1 A C scaffold926 ScafM INDEL 0034.scaffold00131 65923 2 TT .C scaffold926 ScafM INDEL 0034.scaffold00131 65926 2 TT .. scaffold926 ScafM SNP 0034.scaffold00131 65929 1 G A scaffold926 ScafM SNP 0034.scaffold00131 65931 2 TT AA scaffold926 ScafM INDEL 0034.scaffold00131 65936 6 TTTTTT .....A scaffold926 ScafM SNP 0034.scaffold00131 65943 1 T G scaffold926 ScafM INDEL 0034.scaffold00131 65945 2 TT .. scaffold926 ScafM INDEL 0034.scaffold00131 65948 3 GTT .CA scaffold926 Both SNP 0034.scaffold00131 65989 1 A C scaffold926 Both SNP 0034.scaffold00131 66271 1 T C scaffold926 Both SNP 0034.scaffold00131 66287 1 C T scaffold926 ScafM SNP 0034.scaffold00131 66364 1 G T scaffold926 ReadM SNP 0034.scaffold00131 66687 1 A G - ReadM SNP 0034.scaffold00131 66707 1 T C - ReadM SNP 0034.scaffold00131 66787 1 T A - ReadM SNP 0034.scaffold00131 66862 1 T C - ReadM INDEL 0034.scaffold00131 66868 2 .. AC - ReadM SNP 0034.scaffold00131 66974 1 A T - ScafM SNP 0034.scaffold00131 67220 2 AC GA scaffold926 ScafM SNP 0034.scaffold00131 67245 1 C A scaffold926 ScafM INDEL 0034.scaffold00131 67250 2 .. AA scaffold926 ScafM SNP 0034.scaffold00131 67275 1 C G scaffold926 ScafM SNP 0034.scaffold00131 67393 1 T C scaffold926 ScafM SNP 0034.scaffold00131 67400 1 G C scaffold926 ScafM SNP 0034.scaffold00131 67415 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 67465 2 TC .. scaffold926 ScafM SNP 0034.scaffold00131 67468 1 A G scaffold926 ScafM SNP 0034.scaffold00131 67556 2 CA TT scaffold926 ScafM SNP 0034.scaffold00131 67637 1 A T scaffold926 ScafM SNP 0034.scaffold00131 67973 1 A G scaffold926 Both SNP 0034.scaffold00131 68013 1 C T scaffold926 Both SNP 0034.scaffold00131 68027 1 A C scaffold926 Both SNP 0034.scaffold00131 68092 1 T A scaffold926 Both SNP 0034.scaffold00131 68126 1 A T scaffold926 Both SNP 0034.scaffold00131 68150 1 G T scaffold926 Both SNP 0034.scaffold00131 68346 1 G A scaffold926 Both SNP 0034.scaffold00131 68350 1 A G scaffold926 Both SNP 0034.scaffold00131 68391 1 C T scaffold926 Both SNP 0034.scaffold00131 68415 1 A T scaffold926 Both SNP 0034.scaffold00131 68465 1 T C scaffold926 Both SNP 0034.scaffold00131 68494 1 G T scaffold926 ScafM SNP 0034.scaffold00131 68740 1 A G scaffold926 Both SNP 0034.scaffold00131 69014 1 A C scaffold926 Both SNP 0034.scaffold00131 69035 1 G A scaffold926 Both SNP 0034.scaffold00131 69172 1 G A scaffold926 ReadM SNP 0034.scaffold00131 69507 1 G T - ReadM SNP 0034.scaffold00131 69703 1 A G - ReadM SNP 0034.scaffold00131 69725 1 G A - ReadM SNP 0034.scaffold00131 69748 1 T A - ReadM SNP 0034.scaffold00131 69781 1 A C - ReadM SNP 0034.scaffold00131 69795 1 T G - Both SNP 0034.scaffold00131 70206 1 T A scaffold926 ReadM SNP 0034.scaffold00131 70323 1 A G - ReadM SNP 0034.scaffold00131 70348 1 T C - ReadM SNP 0034.scaffold00131 70397 1 T C - ReadM SNP 0034.scaffold00131 70483 1 C G - ReadM SNP 0034.scaffold00131 70501 1 G C - ReadM SNP 0034.scaffold00131 70613 1 G A - ReadM SNP 0034.scaffold00131 70715 1 T A - ScafM SNP 0034.scaffold00131 70784 1 C A scaffold926 ScafM SNP 0034.scaffold00131 70787 1 T C scaffold926 ScafM SNP 0034.scaffold00131 70799 1 T C scaffold926 ScafM SNP 0034.scaffold00131 70806 1 C T scaffold926 ReadM SNP 0034.scaffold00131 71898 1 C T - ReadM SNP 0034.scaffold00131 72227 1 G A - ScafM SNP 0034.scaffold00131 72328 1 A G scaffold926 ScafM SNP 0034.scaffold00131 72343 1 C A scaffold926 ReadM SNP 0034.scaffold00131 72470 1 A T - ReadM SNP 0034.scaffold00131 72511 1 A G - ReadM SNP 0034.scaffold00131 72521 1 A T - ReadM SNP 0034.scaffold00131 72596 1 G A - ReadM SNP 0034.scaffold00131 72613 1 G A - ReadM SNP 0034.scaffold00131 72655 1 G T - ReadM SNP 0034.scaffold00131 72688 1 G A - ReadM SNP 0034.scaffold00131 72822 1 G T - ReadM SNP 0034.scaffold00131 72838 1 T A - ReadM SNP 0034.scaffold00131 72868 1 A C - ReadM SNP 0034.scaffold00131 72934 1 T G - ReadM SNP 0034.scaffold00131 73066 1 A T - ReadM SNP 0034.scaffold00131 73115 1 G T - ReadM SNP 0034.scaffold00131 73140 1 A T - ReadM SNP 0034.scaffold00131 73235 1 C G - ReadM SNP 0034.scaffold00131 73275 1 T C - ReadM SNP 0034.scaffold00131 73317 1 A G - ReadM INDEL 0034.scaffold00131 73383 1 C . - ReadM SNP 0034.scaffold00131 73409 1 A T - ReadM INDEL 0034.scaffold00131 73413 1 . C - Both SNP 0034.scaffold00131 73503 1 G A scaffold926 ReadM SNP 0034.scaffold00131 73838 1 C T - ReadM SNP 0034.scaffold00131 73974 1 T C - ReadM SNP 0034.scaffold00131 73996 1 G A - ReadM SNP 0034.scaffold00131 74051 1 C T - ReadM SNP 0034.scaffold00131 74229 1 G A - ReadM SNP 0034.scaffold00131 74318 1 G A - ReadM INDEL 0034.scaffold00131 74422 2 .. AA - ReadM SNP 0034.scaffold00131 74486 1 C T - ReadM SNP 0034.scaffold00131 74500 1 T C - ReadM SNP 0034.scaffold00131 74506 1 T A - ReadM SNP 0034.scaffold00131 74589 1 C A - ReadM INDEL 0034.scaffold00131 74592 1 . A - ReadM SNP 0034.scaffold00131 74679 1 G T - ReadM SNP 0034.scaffold00131 74686 1 G C - ReadM SNP 0034.scaffold00131 74807 1 G T - ReadM SNP 0034.scaffold00131 74965 1 C G - ReadM SNP 0034.scaffold00131 74980 1 T C - ReadM SNP 0034.scaffold00131 75073 1 A G - ReadM SNP 0034.scaffold00131 75094 1 C A - ReadM SNP 0034.scaffold00131 75121 1 A T - Both SNP 0034.scaffold00131 75311 1 T C scaffold926 Both SNP 0034.scaffold00131 75350 1 G A scaffold926 Both SNP 0034.scaffold00131 75369 1 G T scaffold926 ReadM SNP 0034.scaffold00131 75454 1 T C - ReadM SNP 0034.scaffold00131 75475 1 T C - ReadM SNP 0034.scaffold00131 75538 1 T C - ScafM SNP 0034.scaffold00131 76039 1 C G scaffold926 ScafM INDEL 0034.scaffold00131 76127 1 . G scaffold926 ReadM SNP 0034.scaffold00131 78893 1 G A - ReadM SNP 0034.scaffold00131 78921 1 C A - ReadM SNP 0034.scaffold00131 78986 1 G A - ReadM SNP 0034.scaffold00131 78995 1 T C - ReadM SNP 0034.scaffold00131 79033 1 C T - Both SNP 0034.scaffold00131 79120 1 C A scaffold926 ScafM INDEL 0034.scaffold00131 79252 7 CCCCCTT ....... scaffold926 Both SNP 0034.scaffold00131 79282 1 C T scaffold926 Both SNP 0034.scaffold00131 79299 1 T C scaffold926 Both SNP 0034.scaffold00131 79341 1 G T scaffold926 ReadM SNP 0034.scaffold00131 79420 1 A G - ReadM SNP 0034.scaffold00131 79603 1 C A - ReadM SNP 0034.scaffold00131 79639 1 C A - ReadM SNP 0034.scaffold00131 79655 1 T C - ReadM SNP 0034.scaffold00131 79687 1 G A - ReadM INDEL 0034.scaffold00131 79689 1 T . - ScafM SNP 0034.scaffold00131 79910 1 A G scaffold926 ScafM SNP 0034.scaffold00131 80054 1 T A scaffold926 ScafM SNP 0034.scaffold00131 80163 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 80199 4 TTTT .... scaffold926 ReadM SNP 0034.scaffold00131 81354 1 G A - ReadM SNP 0034.scaffold00131 81399 1 A G - ReadM SNP 0034.scaffold00131 81430 1 A G - ReadM SNP 0034.scaffold00131 81476 1 G A - ReadM SNP 0034.scaffold00131 81504 1 T C - ReadM SNP 0034.scaffold00131 81719 1 T C - ReadM SNP 0034.scaffold00131 81779 1 A T - ReadM SNP 0034.scaffold00131 81862 1 G A - ReadM SNP 0034.scaffold00131 81866 1 T G - ReadM SNP 0034.scaffold00131 81880 1 C T - ReadM SNP 0034.scaffold00131 82079 1 A T - ReadM SNP 0034.scaffold00131 83035 1 A T - ReadM SNP 0034.scaffold00131 83041 1 G T - ReadM SNP 0034.scaffold00131 83141 1 A C - ReadM SNP 0034.scaffold00131 83154 1 G A - ReadM SNP 0034.scaffold00131 83207 1 C A - ReadM SNP 0034.scaffold00131 83404 1 A C - ReadM INDEL 0034.scaffold00131 83421 1 . A - ReadM SNP 0034.scaffold00131 83485 1 C A - Both SNP 0034.scaffold00131 83555 1 A G scaffold926 Both SNP 0034.scaffold00131 83560 1 T C scaffold926 Both SNP 0034.scaffold00131 83604 1 A G scaffold926 Both SNP 0034.scaffold00131 83619 1 T C scaffold926 Both SNP 0034.scaffold00131 83758 1 A T scaffold926 Both SNP 0034.scaffold00131 83779 1 T C scaffold926 Both SNP 0034.scaffold00131 83782 1 G A scaffold926 Both SNP 0034.scaffold00131 83901 1 C T scaffold926 Both SNP 0034.scaffold00131 83903 1 A T scaffold926 Both SNP 0034.scaffold00131 84074 1 G A scaffold926 Both SNP 0034.scaffold00131 84179 1 C T scaffold926 Both SNP 0034.scaffold00131 84192 1 A G scaffold926 Both SNP 0034.scaffold00131 84226 1 C T scaffold926 Both SNP 0034.scaffold00131 84233 1 C G scaffold926 Both SNP 0034.scaffold00131 84269 1 A G scaffold926 Both SNP 0034.scaffold00131 84394 1 G A scaffold926 ScafM SNP 0034.scaffold00131 84462 1 T G scaffold926 ScafM INDEL 0034.scaffold00131 84471 7 GGGGGGG ....... scaffold926 Both SNP 0034.scaffold00131 84511 2 AT CG scaffold926 Both SNP 0034.scaffold00131 84586 1 A G scaffold926 Both SNP 0034.scaffold00131 84597 1 T C scaffold926 ScafM INDEL 0034.scaffold00131 84653 7 ....... AAAAAAC scaffold926 Both SNP 0034.scaffold00131 84724 1 T A scaffold926 Both SNP 0034.scaffold00131 84777 1 T C scaffold926 Both SNP 0034.scaffold00131 84806 1 G A scaffold926 Both SNP 0034.scaffold00131 84822 1 G C scaffold926 Both SNP 0034.scaffold00131 84894 1 A G scaffold926 Both SNP 0034.scaffold00131 84977 1 C T scaffold926 ScafM SNP 0034.scaffold00131 85001 1 A T scaffold926 ScafM SNP 0034.scaffold00131 85132 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 85152 6 ...... AAAAAA scaffold926 ScafM SNP 0034.scaffold00131 85154 2 TC AA scaffold926 ScafM SNP 0034.scaffold00131 85163 1 T C scaffold926 ScafM SNP 0034.scaffold00131 85188 1 A C scaffold926 Both SNP 0034.scaffold00131 85270 1 G A scaffold926 Both SNP 0034.scaffold00131 85290 1 T A scaffold926 Both INDEL 0034.scaffold00131 85407 1 T . scaffold926 ScafM SNP 0034.scaffold00131 85435 2 CT TA scaffold926 Both SNP 0034.scaffold00131 85581 1 T C scaffold926 Both SNP 0034.scaffold00131 85618 1 A T scaffold926 ScafM SNP 0034.scaffold00131 85653 2 TT CC scaffold926 Both SNP 0034.scaffold00131 85699 1 C A scaffold926 Both SNP 0034.scaffold00131 85757 1 A T scaffold926 ScafM SNP 0034.scaffold00131 85863 1 A T scaffold926 Both SNP 0034.scaffold00131 85909 1 G A scaffold926 Both SNP 0034.scaffold00131 85930 1 A T scaffold926 Both SNP 0034.scaffold00131 85962 1 G A scaffold926 Both SNP 0034.scaffold00131 85986 1 T C scaffold926 Both SNP 0034.scaffold00131 86051 1 G A scaffold926 Both SNP 0034.scaffold00131 86097 1 T A scaffold926 ScafM SNP 0034.scaffold00131 86111 2 TT AA scaffold926 Both SNP 0034.scaffold00131 86140 1 T G scaffold926 Both SNP 0034.scaffold00131 86210 1 C A scaffold926 Both SNP 0034.scaffold00131 86223 1 A C scaffold926 ReadM SNP 0034.scaffold00131 86314 1 G T - ReadM SNP 0034.scaffold00131 86337 1 T C - ReadM SNP 0034.scaffold00131 86368 1 T G - ReadM SNP 0034.scaffold00131 86434 1 A C - ReadM SNP 0034.scaffold00131 86601 1 A C - ReadM SNP 0034.scaffold00131 86644 1 C A - ReadM SNP 0034.scaffold00131 86696 1 C A - ReadM SNP 0034.scaffold00131 86737 1 T C - ReadM SNP 0034.scaffold00131 87030 1 C A - ReadM SNP 0034.scaffold00131 87164 1 A T - ReadM SNP 0034.scaffold00131 87258 1 A G - ReadM SNP 0034.scaffold00131 87308 1 A C - ReadM SNP 0034.scaffold00131 87440 1 G A - ReadM SNP 0034.scaffold00131 87768 1 T C - ReadM SNP 0034.scaffold00131 87946 1 G A - ReadM SNP 0034.scaffold00131 87960 1 T A - ReadM INDEL 0034.scaffold00131 88008 1 A . - ReadM SNP 0034.scaffold00131 88040 1 G T - ScafM SNP 0034.scaffold00131 88130 1 G A scaffold926 ScafM SNP 0034.scaffold00131 88136 1 G A scaffold926 ScafM SNP 0034.scaffold00131 88147 1 A G scaffold926 ScafM SNP 0034.scaffold00131 88159 1 C T scaffold926 Both SNP 0034.scaffold00131 88176 1 C T scaffold926 Both SNP 0034.scaffold00131 88228 1 G C scaffold926 ScafM SNP 0034.scaffold00131 88273 1 T C scaffold926 ScafM SNP 0034.scaffold00131 88275 1 G T scaffold926 ScafM SNP 0034.scaffold00131 88281 1 G A scaffold926 ScafM SNP 0034.scaffold00131 88285 1 A C scaffold926 ScafM SNP 0034.scaffold00131 88307 1 A G scaffold926 Both INDEL 0034.scaffold00131 88351 2 .. AA scaffold926 Both SNP 0034.scaffold00131 88360 1 A G scaffold926 Both SNP 0034.scaffold00131 88441 1 G C scaffold926 Both SNP 0034.scaffold00131 88452 1 A T scaffold926 Both SNP 0034.scaffold00131 88561 1 C T scaffold926 Both SNP 0034.scaffold00131 88576 1 G T scaffold926 Both SNP 0034.scaffold00131 88719 1 A T scaffold926 ReadM SNP 0034.scaffold00131 88895 1 C T - ReadM SNP 0034.scaffold00131 88965 1 T G - ReadM SNP 0034.scaffold00131 88985 1 C A - ReadM SNP 0034.scaffold00131 88994 1 G A - ReadM SNP 0034.scaffold00131 89054 1 G C - ReadM SNP 0034.scaffold00131 89156 1 G T - ScafM SNP 0034.scaffold00131 89320 1 C T scaffold926 Both SNP 0034.scaffold00131 89336 1 A G scaffold926 Both SNP 0034.scaffold00131 89365 1 G A scaffold926 Both SNP 0034.scaffold00131 89446 1 A G scaffold926 Both SNP 0034.scaffold00131 89452 1 A C scaffold926 ScafM INDEL 0034.scaffold00131 89509 1 C . scaffold926 ScafM INDEL 0034.scaffold00131 89511 1 G . scaffold926 Both SNP 0034.scaffold00131 89686 1 A T scaffold926 ReadM SNP 0034.scaffold00131 89884 1 A G - ReadM SNP 0034.scaffold00131 89897 1 G A - Both SNP 0034.scaffold00131 89926 1 G T scaffold926 ReadM SNP 0034.scaffold00131 90001 1 C G - ReadM SNP 0034.scaffold00131 90124 1 T C - ReadM SNP 0034.scaffold00131 90163 1 G A - ReadM SNP 0034.scaffold00131 90217 1 T G - ReadM SNP 0034.scaffold00131 90223 1 A G - ReadM SNP 0034.scaffold00131 90312 1 T C - Both SNP 0034.scaffold00131 90339 1 A G scaffold926 Both SNP 0034.scaffold00131 90347 1 A T scaffold926 Both SNP 0034.scaffold00131 90437 1 T G scaffold926 Both SNP 0034.scaffold00131 90506 1 T C scaffold926 ScafM SNP 0034.scaffold00131 90558 2 AA TT scaffold926 Both SNP 0034.scaffold00131 90567 1 G A scaffold926 Both SNP 0034.scaffold00131 90733 1 G C scaffold926 Both SNP 0034.scaffold00131 90802 1 G A scaffold926 Both SNP 0034.scaffold00131 90935 1 C T scaffold926 Both SNP 0034.scaffold00131 91025 1 A G scaffold926 Both SNP 0034.scaffold00131 91149 1 A T scaffold926 ScafM SNP 0034.scaffold00131 91168 1 C A scaffold926 ScafM INDEL 0034.scaffold00131 91183 5 ATACC ..... scaffold926 ScafM SNP 0034.scaffold00131 91255 1 T C scaffold926 ScafM SNP 0034.scaffold00131 91260 1 G C scaffold926 ScafM SNP 0034.scaffold00131 91283 1 C T scaffold926 ScafM INDEL 0034.scaffold00131 91306 19 ................... TCCAGTTTAAGAGTATTAT scaffold926 ScafM SNP 0034.scaffold00131 91323 1 A G scaffold926 Both SNP 0034.scaffold00131 91400 1 G T scaffold926 Both SNP 0034.scaffold00131 91416 1 G T scaffold926 Both SNP 0034.scaffold00131 91453 1 G A scaffold926 ScafM SNP 0034.scaffold00131 91689 1 G A scaffold926 ScafM SNP 0034.scaffold00131 91718 1 G A scaffold926 Both SNP 0034.scaffold00131 91835 1 G T scaffold926 Both SNP 0034.scaffold00131 91962 1 C T scaffold926 Both SNP 0034.scaffold00131 92275 1 A G scaffold926 Both SNP 0034.scaffold00131 92349 1 C T scaffold926 Both SNP 0034.scaffold00131 92373 1 C T scaffold926 ScafM SNP 0034.scaffold00131 92502 1 G T scaffold926 ScafM INDEL 0034.scaffold00131 92515 1 C . scaffold926 ScafM SNP 0034.scaffold00131 92524 1 A T scaffold926 ScafM SNP 0034.scaffold00131 92556 1 A G scaffold926 ScafM SNP 0034.scaffold00131 92567 1 T C scaffold926 ScafM SNP 0034.scaffold00131 92573 1 T G scaffold926 ScafM SNP 0034.scaffold00131 92581 1 T A scaffold926 ScafM SNP 0034.scaffold00131 92605 1 C A scaffold926 ScafM SNP 0034.scaffold00131 92620 1 A T scaffold926 ScafM INDEL 0034.scaffold00131 92626 1 C . scaffold926 ScafM SNP 0034.scaffold00131 92690 1 C G scaffold926 ScafM SNP 0034.scaffold00131 92692 1 G C scaffold926 Both SNP 0034.scaffold00131 92704 1 T G scaffold926 Both INDEL 0034.scaffold00131 92916 1 T . scaffold926 ScafM INDEL 0034.scaffold00131 92946 1 G . scaffold926 ScafM INDEL 0034.scaffold00131 92952 1 T . scaffold926 ScafM SNP 0034.scaffold00131 92957 2 GT AA scaffold926 Both SNP 0034.scaffold00131 93018 1 G A scaffold926 ScafM SNP 0034.scaffold00131 93125 1 T C scaffold926 ScafM SNP 0034.scaffold00131 93128 1 G A scaffold926 Both INDEL 0034.scaffold00131 93240 3 ATC ... scaffold926 ScafM INDEL 0034.scaffold00131 93313 1 . A scaffold926 ScafM SNP 0034.scaffold00131 93367 1 G T scaffold926 ScafM SNP 0034.scaffold00131 93403 1 C G scaffold926 ScafM SNP 0034.scaffold00131 93595 1 C T scaffold926 ScafM SNP 0034.scaffold00131 93638 1 G A scaffold926 ScafM INDEL 0034.scaffold00131 93654 3 ... AAT scaffold926 ScafM INDEL 0034.scaffold00131 93728 1 . A scaffold926 ScafM SNP 0034.scaffold00131 93730 2 TT AA scaffold926 ScafM SNP 0034.scaffold00131 93790 1 T C scaffold926 Both SNP 0034.scaffold00131 93827 1 T G scaffold926 ReadM SNP 0034.scaffold00131 93910 1 C A - ReadM SNP 0034.scaffold00131 93986 1 C T - ReadM SNP 0034.scaffold00131 94159 1 G A - ReadM SNP 0034.scaffold00131 94170 1 C G - ReadM SNP 0034.scaffold00131 94189 1 T G - ReadM SNP 0034.scaffold00131 94371 1 T G - ReadM INDEL 0034.scaffold00131 94383 1 A . - ReadM SNP 0034.scaffold00131 94535 1 G A - ReadM SNP 0034.scaffold00131 94722 1 A G - ReadM SNP 0034.scaffold00131 94773 1 C G - ReadM SNP 0034.scaffold00131 94869 1 G A - ReadM SNP 0034.scaffold00131 94968 1 G C - ReadM SNP 0034.scaffold00131 95091 1 G A - ScafM SNP 0034.scaffold00131 95204 2 GT CA scaffold926 Both SNP 0034.scaffold00131 95289 1 T C scaffold926 Both SNP 0034.scaffold00131 95292 1 G A scaffold926 Both SNP 0034.scaffold00131 95402 1 G A scaffold926 Both SNP 0034.scaffold00131 95511 1 A T scaffold926 Both SNP 0034.scaffold00131 95668 1 T G scaffold926 Both SNP 0034.scaffold00131 95832 1 T C scaffold926 ScafM SNP 0034.scaffold00131 95845 1 T C scaffold926 Both SNP 0034.scaffold00131 95980 1 T C scaffold926 ScafM SNP 0034.scaffold00131 96024 1 C T scaffold926 ScafM SNP 0034.scaffold00131 96067 1 T C scaffold5646 ScafM SNP 0034.scaffold00131 96075 1 C A scaffold5646 ScafM SNP 0034.scaffold00131 96096 1 C G scaffold5646 ScafM SNP 0034.scaffold00131 96107 3 TTA AAT scaffold5646 ScafM INDEL 0034.scaffold00131 96173 4 .... TATA scaffold5646 ScafM SNP 0034.scaffold00131 96213 1 A G scaffold5646 ScafM SNP 0034.scaffold00131 96222 1 C G scaffold5646 ScafM SNP 0034.scaffold00131 96234 1 G A scaffold5646 ScafM SNP 0034.scaffold00131 96317 1 T C scaffold5646 ScafM SNP 0034.scaffold00131 96527 1 C T scaffold5646 ScafM SNP 0034.scaffold00131 96541 1 A G scaffold5646 ScafM INDEL 0034.scaffold00131 96576 1 . C scaffold5646 ScafM SNP 0034.scaffold00131 96578 1 C A scaffold5646 ScafM INDEL 0034.scaffold00131 96594 1 T . scaffold5646 ScafM SNP 0034.scaffold00131 96686 1 A G scaffold5646 ScafM SNP 0034.scaffold00131 96690 1 T A scaffold5646 ScafM SNP 0034.scaffold00131 96696 1 G A scaffold5646 ScafM SNP 0034.scaffold00131 96709 1 G A scaffold5646 ScafM SNP 0034.scaffold00131 96769 1 C T scaffold926 Both SNP 0034.scaffold00131 96791 1 C A scaffold926 Both SNP 0034.scaffold00131 96796 1 A G scaffold926 ReadM SNP 0034.scaffold00131 96862 1 T C - Both SNP 0034.scaffold00131 97540 1 C T scaffold926 ScafM SNP 0034.scaffold00131 97644 1 G A scaffold926 ReadM SNP 0034.scaffold00131 97699 1 A G - Both INDEL 0034.scaffold00131 97784 1 . A scaffold926 Both SNP 0034.scaffold00131 98002 1 C A scaffold926 Both SNP 0034.scaffold00131 98010 1 C G scaffold926 Both SNP 0034.scaffold00131 98200 1 G A scaffold926 Both SNP 0034.scaffold00131 98283 1 C G scaffold926 ScafM SNP 0034.scaffold00131 98491 1 G C scaffold926 ScafM SNP 0034.scaffold00131 104345 1 C T scaffold926 ScafM SNP 0034.scaffold00131 104350 1 A C scaffold926 ScafM SNP 0034.scaffold00131 104829 2 TC CA scaffold926 ScafM SNP 0034.scaffold00131 104861 1 A G scaffold926 ScafM SNP 0034.scaffold00131 105258 1 A G scaffold926 Both SNP 0034.scaffold00131 105298 1 A G scaffold926 ReadM SNP 0034.scaffold00131 105343 1 T C - Both SNP 0034.scaffold00131 105506 1 A C scaffold926 Both SNP 0034.scaffold00131 105569 1 C T scaffold926 Both INDEL 0034.scaffold00131 105615 2 .. AT scaffold926 Both SNP 0034.scaffold00131 105701 1 C T scaffold926 ScafM SNP 0034.scaffold00131 105762 1 G T scaffold926 ScafM SNP 0034.scaffold00131 105789 1 C T scaffold926 ScafM SNP 0034.scaffold00131 105791 1 G A scaffold926 ScafM SNP 0034.scaffold00131 105815 1 G T scaffold926 ScafM SNP 0034.scaffold00131 105830 1 A T scaffold926 ScafM INDEL 0034.scaffold00131 105842 1 A . scaffold926 ScafM SNP 0034.scaffold00131 105853 1 A T scaffold926 ScafM SNP 0034.scaffold00131 105860 1 T G scaffold926 ScafM SNP 0034.scaffold00131 105902 1 G A scaffold926 Both SNP 0034.scaffold00131 105927 1 G C scaffold926 Both SNP 0034.scaffold00131 105976 1 C T scaffold926 ScafM SNP 0034.scaffold00131 106030 1 C A scaffold926 ScafM SNP 0034.scaffold00131 106034 1 C T scaffold926 ScafM SNP 0034.scaffold00131 106036 1 A G scaffold926 ScafM SNP 0034.scaffold00131 106062 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 106105 5 ATATA ..... scaffold926 ScafM INDEL 0034.scaffold00131 106111 1 A . scaffold926 ScafM SNP 0034.scaffold00131 106114 1 T A scaffold926 ScafM INDEL 0034.scaffold00131 106155 4 ATGA .... scaffold926 ScafM SNP 0034.scaffold00131 106203 1 A G scaffold926 ScafM SNP 0034.scaffold00131 106206 1 C A scaffold926 ScafM INDEL 0034.scaffold00131 106235 1 . A scaffold926 ScafM SNP 0034.scaffold00131 106259 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 106284 4 GCTA .... scaffold926 ScafM INDEL 0034.scaffold00131 106320 2 GT .. scaffold926 ScafM SNP 0034.scaffold00131 106329 1 T A scaffold926 ScafM SNP 0034.scaffold00131 106369 1 G A scaffold926 ScafM SNP 0034.scaffold00131 106388 1 C G scaffold926 ScafM SNP 0034.scaffold00131 106398 1 G T scaffold926 ScafM SNP 0034.scaffold00131 107876 1 C G scaffold7821 ScafM SNP 0034.scaffold00131 107878 1 A T scaffold7821 ScafM INDEL 0034.scaffold00131 107881 4 AAAA .... scaffold7821 ScafM INDEL 0034.scaffold00131 107887 2 AC .. scaffold7821 ScafM INDEL 0034.scaffold00131 107891 5 TATTG ..... scaffold7821 ScafM SNP 0034.scaffold00131 107909 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108163 2 TT GC scaffold7821 ScafM SNP 0034.scaffold00131 108167 1 A T scaffold7821 ScafM SNP 0034.scaffold00131 108172 1 T G scaffold7821 ScafM SNP 0034.scaffold00131 108183 2 GC AA scaffold7821 ScafM SNP 0034.scaffold00131 108191 2 GG AA scaffold7821 ScafM SNP 0034.scaffold00131 108201 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108208 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108225 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108246 3 TGT CAC scaffold7821 ScafM SNP 0034.scaffold00131 108250 1 G T scaffold7821 ScafM SNP 0034.scaffold00131 108261 1 T C scaffold7821 ScafM SNP 0034.scaffold00131 108264 1 C G scaffold7821 ScafM SNP 0034.scaffold00131 108267 1 C A scaffold7821 ScafM SNP 0034.scaffold00131 108273 1 C T scaffold7821 ScafM SNP 0034.scaffold00131 108282 2 TG CA scaffold7821 ScafM SNP 0034.scaffold00131 108286 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108289 1 T C scaffold7821 ScafM SNP 0034.scaffold00131 108294 1 G A scaffold7821 ScafM SNP 0034.scaffold00131 108296 1 T G scaffold7821 ScafM SNP 0034.scaffold00131 108298 1 C T scaffold7821 ScafM SNP 0034.scaffold00131 108306 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108309 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108314 1 A G scaffold7821 ScafM SNP 0034.scaffold00131 108327 1 C A scaffold7821 ScafM SNP 0034.scaffold00131 112919 1 G T scaffold926 ScafM SNP 0034.scaffold00131 112998 1 T C scaffold926 ScafM SNP 0034.scaffold00131 113008 2 AA GG scaffold926 ScafM SNP 0034.scaffold00131 113013 1 G T scaffold926 ScafM SNP 0034.scaffold00131 113029 1 G A scaffold926 ScafM SNP 0034.scaffold00131 113082 1 A T scaffold926 Both SNP 0034.scaffold00131 113104 1 C T scaffold926 Both SNP 0034.scaffold00131 113141 1 G A scaffold926 ScafM SNP 0034.scaffold00131 113190 1 A G scaffold926 ScafM SNP 0034.scaffold00131 113203 1 G T scaffold926 ScafM INDEL 0034.scaffold00131 113216 3 ... ACT scaffold926 ScafM SNP 0034.scaffold00131 113239 1 A G scaffold926 ScafM SNP 0034.scaffold00131 113254 1 G A scaffold926 ScafM SNP 0034.scaffold00131 113279 1 T C scaffold926 ScafM SNP 0034.scaffold00131 113285 1 A G scaffold926 ScafM SNP 0034.scaffold00131 113301 1 T C scaffold926 ScafM SNP 0034.scaffold00131 113322 1 A G scaffold926 ScafM SNP 0034.scaffold00131 113324 3 GCC ATG scaffold926 ScafM SNP 0034.scaffold00131 113332 1 C T scaffold926 ScafM SNP 0034.scaffold00131 113335 1 T C scaffold926 ScafM SNP 0034.scaffold00131 113343 1 C G scaffold926 ScafM SNP 0034.scaffold00131 113348 1 G A scaffold926 ScafM SNP 0034.scaffold00131 113350 2 TG CA scaffold926 ReadM SNP 0034.scaffold00131 113678 1 A T - ReadM SNP 0034.scaffold00131 113694 1 G A - ReadM SNP 0034.scaffold00131 113701 1 C A - ReadM SNP 0034.scaffold00131 113730 1 C T - ReadM INDEL 0034.scaffold00131 113741 1 . A - ReadM SNP 0034.scaffold00131 113798 1 G A - ScafM SNP 0034.scaffold00131 114026 1 A C scaffold926 ScafM SNP 0034.scaffold00131 114085 1 T C scaffold926 ScafM SNP 0034.scaffold00131 114087 1 G A scaffold926 ScafM SNP 0034.scaffold00131 114089 2 GT AA scaffold926 ScafM SNP 0034.scaffold00131 114110 2 GG AT scaffold926 ScafM SNP 0034.scaffold00131 114140 1 T C scaffold926 ScafM SNP 0034.scaffold00131 114159 1 A G scaffold926 ScafM SNP 0034.scaffold00131 116354 1 C A scaffold926 ScafM SNP 0034.scaffold00131 116416 1 A G scaffold926 ScafM SNP 0034.scaffold00131 116507 1 T C scaffold6976 ScafM SNP 0034.scaffold00131 116513 1 C T scaffold6976 ScafM SNP 0034.scaffold00131 116516 1 A G scaffold6976 ScafM SNP 0034.scaffold00131 116521 1 A G scaffold6976 ScafM INDEL 0034.scaffold00131 116540 1 . C scaffold6976 ScafM SNP 0034.scaffold00131 116741 3 TTT CAA scaffold6976 ScafM SNP 0034.scaffold00131 116752 1 A C scaffold6976 ScafM SNP 0034.scaffold00131 116777 1 C T scaffold6976 ScafM SNP 0034.scaffold00131 116782 1 A T scaffold6976 ScafM SNP 0034.scaffold00131 116786 1 C T scaffold6976 ScafM SNP 0034.scaffold00131 116793 1 A G scaffold6976 ScafM SNP 0034.scaffold00131 116847 1 T A scaffold6976 ScafM SNP 0034.scaffold00131 116892 1 C A scaffold6976 ScafM INDEL 0034.scaffold00131 117002 8 GTGGAATT ........ scaffold6976 Both SNP 0034.scaffold00131 117573 1 A G scaffold6976 ScafM SNP 0034.scaffold00131 117591 1 T A scaffold6976 ScafM SNP 0034.scaffold00131 117640 1 G A scaffold6976 ReadM SNP 0034.scaffold00131 117719 1 G A - ScafM INDEL 0034.scaffold00131 118847 4 .... ACCT scaffold9243 ScafM SNP 0034.scaffold00131 118873 1 A G scaffold9243 ScafM SNP 0034.scaffold00131 118877 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 118879 2 AA CG scaffold9243 ScafM SNP 0034.scaffold00131 118893 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 118895 1 C G scaffold9243 ScafM SNP 0034.scaffold00131 118900 1 C G scaffold9243 ScafM SNP 0034.scaffold00131 118925 2 GG AA scaffold9243 ScafM SNP 0034.scaffold00131 118941 1 A T scaffold9243 ScafM SNP 0034.scaffold00131 118947 1 G T scaffold9243 ScafM SNP 0034.scaffold00131 118949 2 GA TG scaffold9243 ScafM INDEL 0034.scaffold00131 118961 1 A . scaffold9243 ScafM SNP 0034.scaffold00131 118969 1 C A scaffold9243 ScafM SNP 0034.scaffold00131 118971 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 118976 1 T C scaffold9243 ScafM SNP 0034.scaffold00131 118993 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 118996 1 C G scaffold9243 ScafM INDEL 0034.scaffold00131 119005 1 . A scaffold9243 ScafM SNP 0034.scaffold00131 119010 1 C A scaffold9243 ScafM SNP 0034.scaffold00131 119032 1 T C scaffold9243 ScafM SNP 0034.scaffold00131 119099 1 G T scaffold9243 ScafM SNP 0034.scaffold00131 119102 1 C A scaffold9243 ScafM SNP 0034.scaffold00131 119131 1 T A scaffold9243 ScafM SNP 0034.scaffold00131 119133 1 C A scaffold9243 ScafM INDEL 0034.scaffold00131 119135 3 ... AGG scaffold9243 ScafM SNP 0034.scaffold00131 119138 1 G C scaffold9243 ScafM SNP 0034.scaffold00131 119142 1 A G scaffold9243 ScafM INDEL 0034.scaffold00131 119165 7 CCAAAGT ....... scaffold9243 ScafM SNP 0034.scaffold00131 119181 1 A T scaffold9243 ScafM INDEL 0034.scaffold00131 119207 1 C . scaffold9243 ScafM SNP 0034.scaffold00131 119210 1 T C scaffold9243 ScafM SNP 0034.scaffold00131 119212 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 119223 1 A G scaffold9243 ScafM SNP 0034.scaffold00131 119251 1 T A scaffold9243 ScafM SNP 0034.scaffold00131 119261 1 T A scaffold9243 ScafM SNP 0034.scaffold00131 119280 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 119285 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119289 1 G C scaffold9243 ScafM SNP 0034.scaffold00131 119298 1 C G scaffold9243 ScafM INDEL 0034.scaffold00131 119313 1 A . scaffold9243 ScafM SNP 0034.scaffold00131 119340 1 T C scaffold9243 ScafM SNP 0034.scaffold00131 119362 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119381 1 A C scaffold9243 ScafM SNP 0034.scaffold00131 119398 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119401 1 A G scaffold9243 ScafM SNP 0034.scaffold00131 119415 1 G C scaffold9243 ScafM SNP 0034.scaffold00131 119419 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119428 1 C G scaffold9243 ScafM SNP 0034.scaffold00131 119435 1 G T scaffold9243 ScafM SNP 0034.scaffold00131 119447 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 119462 2 GA AG scaffold9243 ScafM SNP 0034.scaffold00131 119478 1 T A scaffold9243 ScafM SNP 0034.scaffold00131 119497 2 CA TG scaffold9243 ScafM SNP 0034.scaffold00131 119508 1 G A scaffold9243 ScafM SNP 0034.scaffold00131 119530 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119552 1 A G scaffold9243 ScafM SNP 0034.scaffold00131 119582 1 C T scaffold9243 ScafM INDEL 0034.scaffold00131 119593 1 . A scaffold9243 ScafM SNP 0034.scaffold00131 119604 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119614 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119622 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119639 1 A T scaffold9243 ScafM SNP 0034.scaffold00131 119649 1 G C scaffold9243 ScafM INDEL 0034.scaffold00131 119651 1 C . scaffold9243 ScafM SNP 0034.scaffold00131 119659 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 119675 2 GG AA scaffold9243 ScafM SNP 0034.scaffold00131 119685 2 AC CA scaffold9243 ScafM SNP 0034.scaffold00131 119723 1 T C scaffold9243 ScafM SNP 0034.scaffold00131 119729 1 T C scaffold9243 ScafM INDEL 0034.scaffold00131 119732 1 T . scaffold9243 ScafM SNP 0034.scaffold00131 119734 1 A G scaffold9243 ScafM SNP 0034.scaffold00131 119738 1 C T scaffold9243 ScafM SNP 0034.scaffold00131 123992 1 C T scaffold926 ScafM SNP 0034.scaffold00131 124007 1 G T scaffold926 ScafM SNP 0034.scaffold00131 124031 1 G C scaffold926 ScafM SNP 0034.scaffold00131 124037 1 T G scaffold926 ScafM SNP 0034.scaffold00131 124067 1 T C scaffold926 ScafM SNP 0034.scaffold00131 124073 1 A G scaffold926 Both SNP 0034.scaffold00131 124142 1 G T scaffold926 ScafM INDEL 0034.scaffold00131 124215 6 ...... GACACG scaffold926 Both SNP 0034.scaffold00131 124232 1 G A scaffold926 Both SNP 0034.scaffold00131 124287 1 A G scaffold926 Both SNP 0034.scaffold00131 124295 1 C T scaffold926 ScafM SNP 0034.scaffold00131 124337 1 T C scaffold926 ScafM INDEL 0034.scaffold00131 124343 7 TCTATCA ....... scaffold926 ScafM SNP 0034.scaffold00131 124353 1 A G scaffold926 Both SNP 0034.scaffold00131 124401 1 A G scaffold926 Both SNP 0034.scaffold00131 124452 1 A G scaffold926 Both SNP 0034.scaffold00131 124467 1 T C scaffold926 ScafM INDEL 0034.scaffold00131 124544 3 TAT .GG scaffold926 ScafM SNP 0034.scaffold00131 124573 1 A G scaffold926 ScafM SNP 0034.scaffold00131 124904 1 G T scaffold926 ScafM SNP 0034.scaffold00131 124917 1 T G scaffold926 ScafM SNP 0034.scaffold00131 124930 1 G T scaffold926 ScafM INDEL 0034.scaffold00131 124945 5 TTTAA ..... scaffold926 ScafM SNP 0034.scaffold00131 124973 1 T C scaffold926 ScafM SNP 0034.scaffold00131 125034 1 C G scaffold926 ScafM SNP 0034.scaffold00131 125040 1 T C scaffold926 ScafM SNP 0034.scaffold00131 125063 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 125065 1 . T scaffold926 ScafM SNP 0034.scaffold00131 125083 1 A G scaffold926 ScafM SNP 0034.scaffold00131 125095 1 A G scaffold926 ScafM INDEL 0034.scaffold00131 125103 2 AA .. scaffold926 ScafM INDEL 0034.scaffold00131 125133 1 T . scaffold926 ScafM SNP 0034.scaffold00131 125146 1 G C scaffold926 ScafM SNP 0034.scaffold00131 125217 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 125233 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 125294 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 125336 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 125374 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 125391 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 125393 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 125407 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 125425 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 125433 1 C G scaffold17828 ScafM SNP 0034.scaffold00131 126574 1 C G scaffold17828 ScafM INDEL 0034.scaffold00131 126582 2 GC .. scaffold17828 ScafM SNP 0034.scaffold00131 126605 1 C G scaffold17828 ScafM INDEL 0034.scaffold00131 126659 7 ....... CTTTTGT scaffold17828 ScafM INDEL 0034.scaffold00131 126661 5 ....C GAAGG scaffold17828 ScafM INDEL 0034.scaffold00131 126705 1 A . scaffold17828 ScafM SNP 0034.scaffold00131 126757 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 126777 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 126781 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 126795 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 126798 2 AA GG scaffold17828 ScafM SNP 0034.scaffold00131 126804 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 126806 4 AAAA .... scaffold17828 ScafM SNP 0034.scaffold00131 126811 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 126814 1 T G scaffold17828 ScafM INDEL 0034.scaffold00131 126817 8 ACATATCT ......GG scaffold17828 ScafM SNP 0034.scaffold00131 126826 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 126831 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 126843 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 126851 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 126855 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 126860 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 126893 1 T C scaffold17828 ScafM INDEL 0034.scaffold00131 126910 17 ................. TTTAGTAGGAGGTTGTA scaffold17828 ScafM SNP 0034.scaffold00131 126981 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 126987 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 127006 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 128343 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 128351 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 128358 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 128362 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 128385 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 128399 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 128415 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 128454 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 128802 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 128804 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 128808 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 128812 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 128842 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 128852 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 128863 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 128880 1 C T scaffold17828 ScafM INDEL 0034.scaffold00131 128932 1 A . scaffold17828 ScafM SNP 0034.scaffold00131 128978 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 128983 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 128989 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 129013 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 129015 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 129036 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129042 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 129050 1 C T scaffold17828 ScafM INDEL 0034.scaffold00131 129054 1 T . scaffold17828 ScafM SNP 0034.scaffold00131 129061 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129063 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129264 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 129282 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 129297 1 C G scaffold17828 ScafM SNP 0034.scaffold00131 129338 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 129343 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 129345 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 129348 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 129350 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 129368 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 129397 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 129403 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129420 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 129445 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 129447 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 129451 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 129476 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129501 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 129520 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 129584 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129591 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129606 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 129631 1 C G scaffold17828 ScafM SNP 0034.scaffold00131 129647 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 129959 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 129967 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 129981 2 TC GT scaffold17828 ScafM SNP 0034.scaffold00131 129984 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 129991 1 . T scaffold17828 ScafM SNP 0034.scaffold00131 130000 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130046 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 130058 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 130064 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 130087 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130109 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 130112 1 T C scaffold17828 ScafM INDEL 0034.scaffold00131 130114 3 ATC ... scaffold17828 ScafM SNP 0034.scaffold00131 130163 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130212 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 130247 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130254 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 130270 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 130288 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 130297 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130320 1 T A scaffold17828 ScafM INDEL 0034.scaffold00131 130341 2 AT .. scaffold17828 ScafM SNP 0034.scaffold00131 130358 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 130360 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 130382 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 130391 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130393 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 130442 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130444 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130451 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130460 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130462 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130475 1 G C scaffold17828 ScafM SNP 0034.scaffold00131 130491 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 130498 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 130536 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130565 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 130643 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 130645 2 TA CT scaffold17828 ScafM SNP 0034.scaffold00131 130664 1 C G scaffold17828 ScafM SNP 0034.scaffold00131 130666 1 A C scaffold17828 ScafM INDEL 0034.scaffold00131 130671 4 .... ATAT scaffold17828 ScafM SNP 0034.scaffold00131 130689 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 130691 1 . T scaffold17828 ScafM SNP 0034.scaffold00131 130701 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 130707 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130735 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 130763 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 130784 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 130809 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 130811 1 A T scaffold17828 ScafM INDEL 0034.scaffold00131 130857 2 .. AG scaffold17828 ScafM SNP 0034.scaffold00131 130883 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 131083 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 131106 1 A C scaffold17828 ScafM INDEL 0034.scaffold00131 131118 1 T . scaffold17828 ScafM SNP 0034.scaffold00131 131127 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 131154 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 131159 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 131161 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 131182 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 131188 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 131380 1 . C scaffold17828 ScafM SNP 0034.scaffold00131 131382 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 131390 1 C T scaffold17828 ScafM INDEL 0034.scaffold00131 131412 1 A . scaffold17828 Both SNP 0034.scaffold00131 131431 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 131515 1 T A scaffold17828 ScafM SNP 0034.scaffold00131 131556 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 131564 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 131572 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 131574 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 131581 1 T G scaffold17828 ScafM INDEL 0034.scaffold00131 131612 1 . T scaffold17828 ScafM SNP 0034.scaffold00131 131629 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 131639 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 131653 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 131655 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 131675 1 C A scaffold17828 ScafM SNP 0034.scaffold00131 131680 1 C A scaffold17828 ScafM INDEL 0034.scaffold00131 131702 1 T . scaffold17828 ScafM SNP 0034.scaffold00131 131720 1 C T scaffold17828 ScafM INDEL 0034.scaffold00131 131763 1 . A scaffold17828 ScafM SNP 0034.scaffold00131 131842 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 131876 1 G A scaffold17828 ScafM INDEL 0034.scaffold00131 131884 2 CC .G scaffold17828 ScafM SNP 0034.scaffold00131 131893 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 131895 2 TT .A scaffold17828 ScafM SNP 0034.scaffold00131 131905 1 A T scaffold17828 ScafM SNP 0034.scaffold00131 131908 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 131971 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 131974 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 131976 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 131980 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 131988 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 131995 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 131999 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 132003 1 C T scaffold17828 ScafM SNP 0034.scaffold00131 132020 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 132039 1 T C scaffold17828 ScafM SNP 0034.scaffold00131 132043 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 132053 3 CGT ACC scaffold17828 ScafM SNP 0034.scaffold00131 132057 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 132063 1 A C scaffold17828 ScafM SNP 0034.scaffold00131 132103 1 T G scaffold17828 ScafM SNP 0034.scaffold00131 132193 1 T A scaffold17828 ScafM INDEL 0034.scaffold00131 132200 3 ... ATT scaffold17828 ScafM INDEL 0034.scaffold00131 132215 1 . A scaffold17828 ScafM SNP 0034.scaffold00131 132222 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 132240 1 A G scaffold17828 ScafM INDEL 0034.scaffold00131 132288 3 TAA ... scaffold17828 ScafM SNP 0034.scaffold00131 132306 2 TT CG scaffold17828 ScafM SNP 0034.scaffold00131 132310 1 A G scaffold17828 ScafM SNP 0034.scaffold00131 132320 1 G A scaffold17828 ScafM SNP 0034.scaffold00131 132336 1 G T scaffold17828 ScafM SNP 0034.scaffold00131 132338 1 G A scaffold17828 ScafM INDEL 0034.scaffold00131 132343 1 T . scaffold17828 ScafM SNP 0034.scaffold00131 150887 1 T A scaffold428 ScafM SNP 0034.scaffold00131 150901 1 A T scaffold428 ScafM SNP 0034.scaffold00131 150911 1 T A scaffold428 ScafM SNP 0034.scaffold00131 150934 1 A G scaffold428 ScafM SNP 0034.scaffold00131 151001 1 C A scaffold428 ScafM SNP 0034.scaffold00131 151009 1 T A scaffold428 ScafM SNP 0034.scaffold00131 151014 1 A G scaffold428 ReadM SNP 0034.scaffold00131 167775 1 A T - ReadM SNP 0034.scaffold00131 168495 1 C T - ReadM SNP 0034.scaffold00131 168852 1 T C - ReadM SNP 0034.scaffold00131 168857 1 C T - ReadM SNP 0034.scaffold00131 168883 1 G A - ReadM SNP 0034.scaffold00131 168941 1 C T - ReadM SNP 0034.scaffold00131 169393 1 G T - ReadM SNP 0034.scaffold00131 169456 1 G A - ReadM SNP 0034.scaffold00131 169741 1 A C - ReadM SNP 0034.scaffold00131 169853 1 C T - ReadM SNP 0034.scaffold00131 170836 1 T C - ReadM SNP 0034.scaffold00131 170865 1 C T - ReadM SNP 0034.scaffold00131 171252 1 A C - ScafM SNP 0034.scaffold00131 200106 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 200110 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 200140 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 200200 2 TT CC scaffold5628 ScafM SNP 0034.scaffold00131 200218 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 200220 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 200228 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 200230 1 T G scaffold5628 ReadM SNP 0034.scaffold00131 200559 1 C T - ScafM SNP 0034.scaffold00131 201094 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 201098 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 201121 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 201180 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 201192 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 201218 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 201238 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 201241 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 204881 1 A C scaffold41962 ScafM SNP 0034.scaffold00131 204884 2 TT CG scaffold41962 ScafM INDEL 0034.scaffold00131 204887 2 TG .. scaffold41962 ScafM SNP 0034.scaffold00131 204954 1 A G scaffold41962 ScafM SNP 0034.scaffold00131 204971 1 G T scaffold41962 ScafM SNP 0034.scaffold00131 208610 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 208631 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 208663 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 208683 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 208696 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 208710 2 .. CG scaffold5628 ScafM SNP 0034.scaffold00131 208726 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 208731 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 208733 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 208774 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 208796 2 CT AC scaffold5628 ScafM SNP 0034.scaffold00131 208817 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 208836 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 208858 6 AGGTCG ...... scaffold5628 ScafM SNP 0034.scaffold00131 208888 1 A T scaffold5628 ReadM SNP 0034.scaffold00131 209852 1 C T - ReadM SNP 0034.scaffold00131 209894 1 T C - ReadM SNP 0034.scaffold00131 210117 1 C T - ReadM SNP 0034.scaffold00131 210119 1 A G - ReadM SNP 0034.scaffold00131 210141 1 G T - ReadM SNP 0034.scaffold00131 210406 1 C T - ReadM SNP 0034.scaffold00131 210497 1 G C - ReadM SNP 0034.scaffold00131 210506 1 T C - ReadM SNP 0034.scaffold00131 212597 1 G A - ScafM SNP 0034.scaffold00131 213639 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 213684 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 213699 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 213715 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 213743 1 A C scaffold9867 ScafM SNP 0034.scaffold00131 213788 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 213798 1 A T scaffold9867 ScafM SNP 0034.scaffold00131 213814 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 213867 1 A T scaffold9867 ScafM INDEL 0034.scaffold00131 213911 1 A . scaffold9867 ScafM SNP 0034.scaffold00131 213916 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 213928 1 T A scaffold9867 ScafM SNP 0034.scaffold00131 213958 1 A T scaffold9867 ScafM SNP 0034.scaffold00131 213970 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 213984 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 214059 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 214077 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 214094 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 214098 1 A C scaffold9867 ScafM SNP 0034.scaffold00131 214108 1 G T scaffold9867 ScafM SNP 0034.scaffold00131 214121 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 214137 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 214148 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 214152 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 214157 1 C T scaffold9867 ScafM INDEL 0034.scaffold00131 214160 1 . C scaffold9867 ScafM INDEL 0034.scaffold00131 214161 1 . C scaffold9867 ScafM SNP 0034.scaffold00131 214163 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 214169 1 T C scaffold9867 ScafM INDEL 0034.scaffold00131 214188 7 TTCCCCC ......A scaffold9867 ScafM INDEL 0034.scaffold00131 214196 3 GGT ... scaffold9867 ScafM SNP 0034.scaffold00131 214200 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 214208 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 214210 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 214215 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 214231 1 G C scaffold9867 ReadM INDEL 0034.scaffold00131 214486 2 TT .. - ScafM INDEL 0034.scaffold00131 220176 1 A . scaffold24797 ScafM SNP 0034.scaffold00131 220183 2 GC TT scaffold24797 ScafM SNP 0034.scaffold00131 220200 1 G C scaffold24797 ScafM SNP 0034.scaffold00131 220247 1 A T scaffold24797 ScafM INDEL 0034.scaffold00131 220263 1 . T scaffold24797 ScafM INDEL 0034.scaffold00131 220286 2 CT .. scaffold24797 ScafM SNP 0034.scaffold00131 220328 1 C A scaffold24797 ScafM INDEL 0034.scaffold00131 220332 1 . G scaffold24797 ScafM SNP 0034.scaffold00131 220345 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 220373 1 A C scaffold24797 ScafM SNP 0034.scaffold00131 220382 1 C G scaffold24797 ScafM SNP 0034.scaffold00131 220399 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 220420 1 G A scaffold24797 ScafM SNP 0034.scaffold00131 220422 1 A G scaffold24797 ScafM SNP 0034.scaffold00131 220427 1 T A scaffold24797 ScafM SNP 0034.scaffold00131 220431 2 TA GC scaffold24797 ScafM SNP 0034.scaffold00131 220434 1 T A scaffold24797 ScafM SNP 0034.scaffold00131 220440 1 G T scaffold24797 ScafM INDEL 0034.scaffold00131 220453 9 ......... AGTCGAAAT scaffold24797 ScafM SNP 0034.scaffold00131 220485 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 220540 1 G A scaffold24797 ScafM SNP 0034.scaffold00131 220548 1 T G scaffold24797 ScafM SNP 0034.scaffold00131 220561 1 A G scaffold24797 ScafM SNP 0034.scaffold00131 220579 1 G C scaffold24797 ScafM SNP 0034.scaffold00131 220611 1 C G scaffold24797 ScafM SNP 0034.scaffold00131 220620 1 T A scaffold24797 ScafM SNP 0034.scaffold00131 220633 1 T G scaffold24797 ScafM INDEL 0034.scaffold00131 220667 2 .. AA scaffold24797 ScafM SNP 0034.scaffold00131 220672 2 TG AA scaffold24797 ScafM SNP 0034.scaffold00131 220676 1 T G scaffold24797 ScafM SNP 0034.scaffold00131 220683 1 A T scaffold24797 ScafM INDEL 0034.scaffold00131 220691 2 .. TT scaffold24797 ScafM INDEL 0034.scaffold00131 220692 2 .. TG scaffold24797 ScafM SNP 0034.scaffold00131 220698 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 220700 1 A G scaffold24797 ScafM SNP 0034.scaffold00131 220702 1 A G scaffold24797 ScafM SNP 0034.scaffold00131 220707 2 AT GC scaffold24797 ScafM SNP 0034.scaffold00131 220711 1 C T scaffold24797 ScafM SNP 0034.scaffold00131 220715 2 CA TT scaffold24797 ScafM SNP 0034.scaffold00131 220721 1 T A scaffold24797 ScafM SNP 0034.scaffold00131 220726 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 220761 2 CA AG scaffold24797 ScafM SNP 0034.scaffold00131 220791 1 A G scaffold24797 ScafM SNP 0034.scaffold00131 220797 1 C T scaffold24797 ScafM INDEL 0034.scaffold00131 220835 2 .. TT scaffold24797 ScafM SNP 0034.scaffold00131 220837 1 C T scaffold24797 ScafM SNP 0034.scaffold00131 220949 1 A C scaffold24797 ScafM SNP 0034.scaffold00131 220996 1 T C scaffold24797 Both SNP 0034.scaffold00131 221060 1 A G scaffold24797 Both SNP 0034.scaffold00131 221095 1 C A scaffold24797 ReadM SNP 0034.scaffold00131 221165 1 C A - ScafM INDEL 0034.scaffold00131 221582 1 . T scaffold24797 ScafM SNP 0034.scaffold00131 221706 1 G A scaffold24797 ScafM SNP 0034.scaffold00131 221721 1 T C scaffold24797 ScafM SNP 0034.scaffold00131 221752 2 GC AT scaffold24797 ScafM SNP 0034.scaffold00131 221803 1 A T scaffold24797 ScafM SNP 0034.scaffold00131 221808 1 A C scaffold24797 ScafM SNP 0034.scaffold00131 222362 1 A G scaffold3119 Both SNP 0034.scaffold00131 222465 1 C T scaffold3119 Both SNP 0034.scaffold00131 222528 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 222554 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 222581 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 222583 1 G A scaffold3119 ReadM SNP 0034.scaffold00131 222829 1 A G - ReadM SNP 0034.scaffold00131 222875 1 G C - ReadM SNP 0034.scaffold00131 222884 1 A G - ReadM SNP 0034.scaffold00131 223165 1 G A - ReadM SNP 0034.scaffold00131 223173 1 A C - ReadM SNP 0034.scaffold00131 223270 1 T C - ReadM SNP 0034.scaffold00131 223287 1 A C - ReadM INDEL 0034.scaffold00131 223318 1 . T - ReadM SNP 0034.scaffold00131 225013 1 G A - ScafM SNP 0034.scaffold00131 225605 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 225621 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 225626 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 225629 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 225639 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 225642 2 TC AG scaffold3119 ScafM SNP 0034.scaffold00131 225647 1 T A scaffold3119 ScafM INDEL 0034.scaffold00131 225658 4 .... AGGG scaffold3119 ScafM INDEL 0034.scaffold00131 225674 2 TG .. scaffold3119 ScafM SNP 0034.scaffold00131 225679 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 225689 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 225698 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 225747 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 226911 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 226934 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 226948 2 GG AA scaffold5628 ReadM SNP 0034.scaffold00131 229548 1 C T - ReadM SNP 0034.scaffold00131 229580 1 C T - ReadM SNP 0034.scaffold00131 230284 1 T C - ReadM SNP 0034.scaffold00131 230292 1 G A - ReadM INDEL 0034.scaffold00131 230300 1 A . - ReadM SNP 0034.scaffold00131 230527 1 A G - ReadM SNP 0034.scaffold00131 230541 1 C T - ReadM INDEL 0034.scaffold00131 230578 1 G . - ReadM SNP 0034.scaffold00131 230636 1 T G - ReadM SNP 0034.scaffold00131 233951 1 G T - ReadM SNP 0034.scaffold00131 233981 1 G A - ReadM SNP 0034.scaffold00131 234480 1 G A - ScafM SNP 0034.scaffold00131 238122 1 C A scaffold3119 ScafM SNP 0034.scaffold00131 238282 2 AG GA scaffold3119 ScafM SNP 0034.scaffold00131 238288 1 A C scaffold3119 ScafM SNP 0034.scaffold00131 238294 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 238315 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 238327 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 238329 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 238336 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 238374 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 238385 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 238400 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 238425 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 238429 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 243871 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 243874 1 C A scaffold8790 ScafM SNP 0034.scaffold00131 243882 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 243885 1 T G scaffold8790 ScafM SNP 0034.scaffold00131 243896 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 243910 2 GG CA scaffold8790 ScafM SNP 0034.scaffold00131 243955 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 243981 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 244006 1 C T scaffold8790 ScafM SNP 0034.scaffold00131 244030 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 244036 1 G A scaffold8790 ScafM INDEL 0034.scaffold00131 244038 1 . T scaffold8790 ScafM SNP 0034.scaffold00131 244043 1 A G scaffold8790 ScafM SNP 0034.scaffold00131 244048 1 A G scaffold8790 ScafM SNP 0034.scaffold00131 244050 1 T C scaffold8790 ScafM INDEL 0034.scaffold00131 244055 2 .. GT scaffold8790 ScafM SNP 0034.scaffold00131 244066 1 C T scaffold8790 ScafM SNP 0034.scaffold00131 244068 1 C T scaffold8790 ScafM SNP 0034.scaffold00131 244070 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 244078 1 A G scaffold8790 ScafM INDEL 0034.scaffold00131 244099 1 A . scaffold8790 ScafM SNP 0034.scaffold00131 244103 1 A C scaffold8790 ScafM SNP 0034.scaffold00131 244123 1 T G scaffold8790 ScafM SNP 0034.scaffold00131 244129 1 G A scaffold8790 ScafM SNP 0034.scaffold00131 244135 1 T A scaffold8790 ScafM SNP 0034.scaffold00131 244138 1 T G scaffold8790 ScafM SNP 0034.scaffold00131 246811 4 GTAC CAGG scaffold3021 ScafM SNP 0034.scaffold00131 246824 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 246827 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 246858 2 TT AC scaffold3021 ScafM SNP 0034.scaffold00131 246887 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 246918 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 246928 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 246931 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 246934 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 246939 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 246941 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 246955 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 246965 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 247814 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 247822 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 247833 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 247855 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 247858 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 260818 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 260822 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 260859 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 260864 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 260866 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 260887 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 260903 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 260919 2 TT .. scaffold4447 ScafM SNP 0034.scaffold00131 260939 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 260943 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 260946 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 260971 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 260986 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 261008 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 261010 2 AG TC scaffold4447 ScafM SNP 0034.scaffold00131 261016 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 261030 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 261037 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 261059 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261071 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 261076 1 T A scaffold4447 ScafM INDEL 0034.scaffold00131 261086 4 CTCA .... scaffold4447 ScafM INDEL 0034.scaffold00131 261091 1 C . scaffold4447 ScafM SNP 0034.scaffold00131 261107 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261109 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 261116 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261124 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261133 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 261136 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 261138 3 ... CAA scaffold4447 ScafM SNP 0034.scaffold00131 261150 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 261161 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261185 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 261205 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 261212 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261280 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 261297 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 261320 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 261374 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 261411 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 261413 5 TTCCT ..... scaffold4447 ScafM INDEL 0034.scaffold00131 261420 3 TTT ... scaffold4447 ScafM SNP 0034.scaffold00131 261424 1 C A scaffold4447 ScafM INDEL 0034.scaffold00131 261427 3 TTT ... scaffold4447 ScafM SNP 0034.scaffold00131 261433 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 261440 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261459 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 261466 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 261484 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 261495 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 261505 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261511 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261515 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261524 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261545 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 261573 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 261584 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261589 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 261609 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 261642 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 261647 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 261652 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261664 2 CA GG scaffold4447 ScafM SNP 0034.scaffold00131 261673 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 261691 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 261713 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 261749 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 261752 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 261755 2 CT TG scaffold4447 ScafM SNP 0034.scaffold00131 261758 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 261762 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 261776 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 261783 2 CT AG scaffold4447 ScafM SNP 0034.scaffold00131 261930 1 T C scaffold7896 ScafM SNP 0034.scaffold00131 261966 1 A C scaffold7896 ScafM SNP 0034.scaffold00131 262001 1 C T scaffold7896 ScafM SNP 0034.scaffold00131 262020 1 A G scaffold7896 ScafM SNP 0034.scaffold00131 262471 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 262477 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 262511 1 G T scaffold4447 ScafM INDEL 0034.scaffold00131 262548 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 262551 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 262554 2 GA CG scaffold4447 ScafM SNP 0034.scaffold00131 262576 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 262602 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 262611 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 262618 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 262632 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 262660 1 . A scaffold4447 ScafM SNP 0034.scaffold00131 262674 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 262681 1 G T scaffold4447 ScafM INDEL 0034.scaffold00131 262688 2 AA .. scaffold4447 ScafM SNP 0034.scaffold00131 262696 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 262727 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 262744 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 262759 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 262771 6 ...... GAAGAA scaffold4447 ScafM SNP 0034.scaffold00131 262777 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 262788 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 262791 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 262799 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 262827 1 T G scaffold4447 ScafM INDEL 0034.scaffold00131 263025 9 TAATTCTTC ......... scaffold4447 ScafM INDEL 0034.scaffold00131 263035 4 GTTT .... scaffold4447 ScafM SNP 0034.scaffold00131 263068 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 263076 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 263078 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 263082 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263085 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 263105 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 263111 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263120 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 263125 2 CG .. scaffold4447 ScafM SNP 0034.scaffold00131 263160 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 263165 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263185 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263201 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 263204 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 263243 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 263255 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 263260 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 263268 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 263276 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 263925 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 263930 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263934 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 263943 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 263965 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 263976 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 263983 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 263987 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 264000 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 264029 1 G C scaffold4447 ScafM INDEL 0034.scaffold00131 264034 3 ... ATT scaffold4447 ScafM INDEL 0034.scaffold00131 264035 1 . G scaffold4447 ScafM INDEL 0034.scaffold00131 264038 1 . A scaffold4447 ScafM SNP 0034.scaffold00131 264059 2 AG TA scaffold4447 ScafM SNP 0034.scaffold00131 264078 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264083 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 264092 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 264108 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 264117 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 264172 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 264194 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 264200 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 264215 2 .C TT scaffold4447 ScafM INDEL 0034.scaffold00131 264226 22 ...................... CAACCAGAAATACCAAACTACC scaffold4447 ScafM INDEL 0034.scaffold00131 264239 1 . G scaffold4447 ScafM SNP 0034.scaffold00131 264241 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 264255 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 264261 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 264276 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264321 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264325 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 264329 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 264353 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 264355 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 264397 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 264437 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264439 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 264465 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 264477 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 264486 2 GC TT scaffold4447 ScafM INDEL 0034.scaffold00131 264530 4 TGGT .... scaffold4447 ScafM INDEL 0034.scaffold00131 264536 12 AGTGAAGAGGTG ...........C scaffold4447 ScafM INDEL 0034.scaffold00131 264550 1 G . scaffold4447 ScafM SNP 0034.scaffold00131 264589 2 TC GT scaffold4447 ScafM SNP 0034.scaffold00131 264608 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 264613 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264631 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 264678 1 A T scaffold7896 ScafM SNP 0034.scaffold00131 264682 1 C T scaffold7896 ScafM SNP 0034.scaffold00131 264696 1 G A scaffold7896 ScafM SNP 0034.scaffold00131 264721 1 G A scaffold7896 ScafM SNP 0034.scaffold00131 264732 1 A C scaffold7896 ScafM SNP 0034.scaffold00131 265261 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 265267 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 265278 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 265325 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 265352 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 265357 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 265364 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 265368 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 265370 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 265387 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 265408 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 265418 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 265457 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 265461 2 TA CC scaffold4447 ScafM SNP 0034.scaffold00131 268686 2 AC GT scaffold6121 ScafM SNP 0034.scaffold00131 268702 1 A T scaffold6121 ScafM SNP 0034.scaffold00131 268714 1 A C scaffold6121 ScafM SNP 0034.scaffold00131 268718 1 T C scaffold6121 ScafM SNP 0034.scaffold00131 268720 1 C T scaffold6121 ScafM SNP 0034.scaffold00131 268746 1 C T scaffold6121 ScafM SNP 0034.scaffold00131 268768 1 A G scaffold6121 ScafM SNP 0034.scaffold00131 268778 1 C A scaffold6121 ScafM SNP 0034.scaffold00131 268798 1 G T scaffold6121 ScafM SNP 0034.scaffold00131 268820 1 G C scaffold6121 ScafM SNP 0034.scaffold00131 268875 1 C T scaffold6121 ScafM INDEL 0034.scaffold00131 269102 2 TA .. scaffold4447 ScafM SNP 0034.scaffold00131 269108 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 269120 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 269126 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 269140 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 269159 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 269162 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 269188 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 269200 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 269204 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 269231 1 C . scaffold4447 ScafM SNP 0034.scaffold00131 269236 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 269245 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 269272 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 269282 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 269285 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 269294 1 T A scaffold4447 ScafM INDEL 0034.scaffold00131 269298 2 .T GA scaffold4447 ScafM SNP 0034.scaffold00131 269304 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 269308 1 T G scaffold4447 ScafM INDEL 0034.scaffold00131 269321 2 TT .G scaffold4447 ScafM SNP 0034.scaffold00131 269386 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 269405 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 269411 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 269469 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 269474 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 278919 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 278924 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 278927 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 278955 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 278957 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 278963 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 279012 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 279021 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 279025 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 279028 7 GGCCAGA ....... scaffold4447 ScafM SNP 0034.scaffold00131 279037 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 279045 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 279047 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 279051 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 279063 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 279096 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 279104 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 279118 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 279137 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 279147 2 AT CA scaffold4447 ScafM SNP 0034.scaffold00131 279155 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 279163 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 279192 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 279205 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 279211 1 C T scaffold4447 ReadM INDEL 0034.scaffold00131 280309 1 . A - ReadM SNP 0034.scaffold00131 280347 1 G A - ReadM SNP 0034.scaffold00131 280385 1 C A - ReadM SNP 0034.scaffold00131 280895 1 C G - ReadM INDEL 0034.scaffold00131 280929 2 .. TC - ScafM SNP 0034.scaffold00131 281153 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 281200 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 281211 1 A T scaffold4447 Both SNP 0034.scaffold00131 281233 1 G A scaffold4447 Both SNP 0034.scaffold00131 281346 1 T A scaffold4447 Both SNP 0034.scaffold00131 281467 1 A G scaffold4447 Both SNP 0034.scaffold00131 281470 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 281480 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 281490 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 281493 2 GC AT scaffold4447 ScafM SNP 0034.scaffold00131 281507 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 281554 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 281565 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 282069 1 G C scaffold4960 ScafM SNP 0034.scaffold00131 282075 1 A G scaffold4960 ScafM SNP 0034.scaffold00131 282084 1 A G scaffold4960 ScafM SNP 0034.scaffold00131 285049 1 C A scaffold4960 ScafM SNP 0034.scaffold00131 285053 1 A C scaffold4960 ScafM SNP 0034.scaffold00131 285080 1 T C scaffold4960 ScafM SNP 0034.scaffold00131 285135 1 A C scaffold4960 ScafM SNP 0034.scaffold00131 285238 1 C T scaffold4960 ScafM SNP 0034.scaffold00131 285278 1 C T scaffold4960 ScafM INDEL 0034.scaffold00131 285288 1 A . scaffold4960 ScafM INDEL 0034.scaffold00131 285314 3 TAT ... scaffold4960 ScafM SNP 0034.scaffold00131 285383 1 C T scaffold4960 ScafM SNP 0034.scaffold00131 285411 1 C A scaffold4960 ReadM SNP 0034.scaffold00131 285467 1 G A - ReadM SNP 0034.scaffold00131 285498 1 T G - ScafM SNP 0034.scaffold00131 285506 1 G A scaffold4960 ScafM SNP 0034.scaffold00131 285553 1 T C scaffold4960 ScafM SNP 0034.scaffold00131 285604 1 G A scaffold4960 ScafM SNP 0034.scaffold00131 285617 1 C A scaffold4960 ScafM SNP 0034.scaffold00131 285678 1 C G scaffold4960 ReadM SNP 0034.scaffold00131 285797 1 G C - ReadM SNP 0034.scaffold00131 286069 1 C G - ReadM SNP 0034.scaffold00131 286289 1 G A - ScafM SNP 0034.scaffold00131 288447 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 288472 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 288479 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 288483 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 288502 5 ATATA ..... scaffold4447 ScafM SNP 0034.scaffold00131 288585 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 289141 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 289169 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 289250 1 G . scaffold4447 ScafM SNP 0034.scaffold00131 289589 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 289596 2 .. TC scaffold4447 ScafM SNP 0034.scaffold00131 289607 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 289612 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 289637 1 . A scaffold4447 ScafM SNP 0034.scaffold00131 289639 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 289655 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 289659 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 289675 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 289686 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 289720 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 289770 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 289783 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 289790 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 289804 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 289817 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 289838 2 TC GA scaffold4447 ScafM SNP 0034.scaffold00131 289861 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 289870 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 289883 1 T C scaffold4447 Both SNP 0034.scaffold00131 289924 1 T A scaffold4447 Both SNP 0034.scaffold00131 289928 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 290281 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 290323 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 290325 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 290335 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 290341 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 290355 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 290389 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 290394 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 290397 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 290404 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 290410 6 GCTTGG .....A scaffold4447 ScafM SNP 0034.scaffold00131 290434 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 290438 2 .. AT scaffold4447 ScafM INDEL 0034.scaffold00131 290476 6 TACAAC ...... scaffold4447 ScafM SNP 0034.scaffold00131 290494 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 290505 3 CGA ... scaffold4447 ScafM SNP 0034.scaffold00131 290515 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 290517 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 290523 1 C T scaffold4447 ReadM SNP 0034.scaffold00131 291356 1 A G - ReadM SNP 0034.scaffold00131 291415 1 T C - ReadM SNP 0034.scaffold00131 291882 1 T G - ScafM SNP 0034.scaffold00131 294131 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 294133 2 CT TA scaffold4447 ScafM SNP 0034.scaffold00131 294157 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 294163 1 A T scaffold4447 Both SNP 0034.scaffold00131 294177 1 G A scaffold4447 Both SNP 0034.scaffold00131 294219 1 C T scaffold4447 Both SNP 0034.scaffold00131 294279 2 AT GC scaffold4447 ScafM SNP 0034.scaffold00131 294291 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 294304 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 294320 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 294360 1 A G scaffold4447 ReadM SNP 0034.scaffold00131 294657 1 G A - ScafM SNP 0034.scaffold00131 294956 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 294958 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 294967 1 . G scaffold4447 ScafM SNP 0034.scaffold00131 294979 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 294988 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 294997 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 295249 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 295251 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 295261 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 295271 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 295274 1 C G scaffold4447 ScafM INDEL 0034.scaffold00131 295284 5 AAAAG ..... scaffold4447 ScafM SNP 0034.scaffold00131 295332 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 295335 4 .... TTGC scaffold4447 ScafM SNP 0034.scaffold00131 295337 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 295340 3 ... ACT scaffold4447 ScafM INDEL 0034.scaffold00131 295342 2 .. CC scaffold4447 ScafM INDEL 0034.scaffold00131 295344 1 . C scaffold4447 ScafM INDEL 0034.scaffold00131 295346 1 . C scaffold4447 ScafM INDEL 0034.scaffold00131 295348 9 ......... GGTGGAATA scaffold4447 ScafM SNP 0034.scaffold00131 295384 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 295388 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 295402 2 GT TG scaffold4447 ScafM SNP 0034.scaffold00131 295412 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 295423 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 295443 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 295467 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 295483 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 295496 2 AT .. scaffold4447 ScafM SNP 0034.scaffold00131 295500 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 295524 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 295527 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 295531 1 G T scaffold4447 ScafM INDEL 0034.scaffold00131 295559 3 AAT ... scaffold4447 ScafM SNP 0034.scaffold00131 295565 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 295567 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 295573 2 CT TG scaffold4447 ScafM SNP 0034.scaffold00131 295627 1 C A scaffold4447 ScafM INDEL 0034.scaffold00131 295632 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 295645 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 295668 1 A . scaffold4447 ScafM INDEL 0034.scaffold00131 295690 3 ... AAA scaffold4447 ScafM SNP 0034.scaffold00131 295711 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 295718 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 295731 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 295795 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 295827 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 295903 2 CA TG scaffold4447 ScafM INDEL 0034.scaffold00131 295918 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 295920 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 295935 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 295949 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 295979 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 296002 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 296361 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 296384 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 296408 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 296439 4 TTTT AGAA scaffold4447 ScafM INDEL 0034.scaffold00131 296443 6 ...... GGAGAA scaffold4447 ScafM SNP 0034.scaffold00131 296444 2 TC AA scaffold4447 ScafM INDEL 0034.scaffold00131 296446 3 .CC AAT scaffold4447 ScafM SNP 0034.scaffold00131 296492 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 296496 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 296513 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 296528 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 296768 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 296789 17 TCATATTTTTGTACTTC ................. scaffold4447 ScafM INDEL 0034.scaffold00131 296807 8 ATAAAATT ........ scaffold4447 ScafM INDEL 0034.scaffold00131 296818 10 AATACAAACC .......... scaffold4447 ScafM INDEL 0034.scaffold00131 296829 2 TA .. scaffold4447 ScafM SNP 0034.scaffold00131 296832 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 296846 1 G . scaffold4447 ScafM SNP 0034.scaffold00131 296851 1 C T scaffold4447 Both INDEL 0034.scaffold00131 296877 1 T . scaffold4447 Both SNP 0034.scaffold00131 296909 1 A T scaffold4447 Both SNP 0034.scaffold00131 296978 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 297254 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 297264 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297280 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 297285 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 297288 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297293 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 297327 2 CT .. scaffold4447 ScafM INDEL 0034.scaffold00131 297367 4 TTAA .... scaffold4447 ScafM SNP 0034.scaffold00131 297381 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297477 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 297480 1 T G scaffold4447 ScafM INDEL 0034.scaffold00131 297489 8 ........ GTATCAAC scaffold4447 ScafM INDEL 0034.scaffold00131 297492 2 .. TT scaffold4447 ScafM INDEL 0034.scaffold00131 297495 19 ................... TGAGTAGTGAGGACTTCCC scaffold4447 ScafM INDEL 0034.scaffold00131 297497 17 ................. TTTTAGTGTTGGAATTG scaffold4447 ScafM INDEL 0034.scaffold00131 297499 4 .... TCAA scaffold4447 ScafM INDEL 0034.scaffold00131 297501 6 ...... GTTGTC scaffold4447 ScafM SNP 0034.scaffold00131 297580 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 297587 2 TC CT scaffold4447 ScafM SNP 0034.scaffold00131 297609 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 297650 2 .. AT scaffold4447 ScafM SNP 0034.scaffold00131 297678 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 297686 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 297711 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 297717 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297724 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 297754 4 AACT .... scaffold4447 ScafM SNP 0034.scaffold00131 297776 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297803 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 297829 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 297873 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 297878 2 CA TG scaffold4447 ScafM SNP 0034.scaffold00131 297946 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 297949 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 297970 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 297979 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 297986 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 297988 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 297992 1 . A scaffold4447 ScafM SNP 0034.scaffold00131 298030 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 298038 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 298045 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 298049 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 298053 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 298056 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 298058 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 298064 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 298139 1 . C scaffold4447 ScafM SNP 0034.scaffold00131 298198 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 298276 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 298285 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 298317 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 298322 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 298403 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 298404 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 298602 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 298648 7 TTTTCCT ....... scaffold4447 ScafM SNP 0034.scaffold00131 298719 1 T A scaffold4447 Both SNP 0034.scaffold00131 298871 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 298901 1 C G scaffold4447 ScafM INDEL 0034.scaffold00131 298906 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 298928 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 298940 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 298952 1 T G scaffold4447 Both SNP 0034.scaffold00131 299067 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 299076 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 299106 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 299137 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 299141 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 299143 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 299145 3 ... ATA scaffold4447 ScafM INDEL 0034.scaffold00131 299146 1 . A scaffold4447 ScafM INDEL 0034.scaffold00131 299175 12 ............ TTGATGACATAT scaffold4447 ScafM SNP 0034.scaffold00131 299195 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 299209 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 299215 2 CC TT scaffold4447 ScafM SNP 0034.scaffold00131 299232 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 299241 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 299263 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 299303 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 299307 2 TG GA scaffold4447 ScafM SNP 0034.scaffold00131 299334 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 299368 4 .... TAAG scaffold4447 ScafM SNP 0034.scaffold00131 299382 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 299392 5 CTGGC ...AA scaffold4447 ScafM INDEL 0034.scaffold00131 299439 3 ... AAT scaffold4447 ScafM SNP 0034.scaffold00131 299509 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 299535 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 299554 3 ... TCA scaffold4447 ScafM INDEL 0034.scaffold00131 299573 1 A . scaffold4447 ScafM INDEL 0034.scaffold00131 299590 2 AT .. scaffold4447 ScafM SNP 0034.scaffold00131 299611 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 299623 2 GA AG scaffold4447 ScafM SNP 0034.scaffold00131 299914 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 299957 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 299974 2 TG CC scaffold4447 ScafM INDEL 0034.scaffold00131 300030 1 . C scaffold4447 ScafM INDEL 0034.scaffold00131 300031 2 .. GC scaffold4447 ScafM SNP 0034.scaffold00131 300036 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 300073 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 300084 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 300121 2 GG AC scaffold4447 ScafM SNP 0034.scaffold00131 300130 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 300134 14 .............. TTCAATATAACCTG scaffold4447 ScafM INDEL 0034.scaffold00131 300135 1 . T scaffold4447 ScafM INDEL 0034.scaffold00131 300137 4 .... TAGA scaffold4447 ScafM INDEL 0034.scaffold00131 300139 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 300184 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 300203 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 300212 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 300223 1 C A scaffold4447 ScafM INDEL 0034.scaffold00131 300239 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 300380 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 300387 2 AA GG scaffold4447 ScafM SNP 0034.scaffold00131 300394 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 300440 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 300443 1 T G scaffold4447 Both SNP 0034.scaffold00131 300500 1 T C scaffold4447 Both SNP 0034.scaffold00131 300545 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 300581 2 CA AG scaffold4447 ScafM SNP 0034.scaffold00131 300594 2 TC CT scaffold4447 ScafM INDEL 0034.scaffold00131 300624 42 ACATCGTAGCCACGGAAAGGAATTCTAAAGGGCAGAAGACAA .......................................... scaffold4447 ScafM SNP 0034.scaffold00131 300687 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 300692 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 300710 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 300712 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 300714 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 300736 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 300796 1 T G scaffold4447 Both SNP 0034.scaffold00131 300802 1 T C scaffold4447 Both SNP 0034.scaffold00131 300842 1 C T scaffold4447 Both SNP 0034.scaffold00131 300850 1 C T scaffold4447 Both SNP 0034.scaffold00131 300913 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 300925 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 300927 1 A G scaffold4447 Both SNP 0034.scaffold00131 300958 1 C G scaffold4447 Both SNP 0034.scaffold00131 300963 1 T C scaffold4447 ReadM SNP 0034.scaffold00131 301021 1 C T - ReadM SNP 0034.scaffold00131 301048 1 G A - ReadM SNP 0034.scaffold00131 301054 1 T A - ReadM SNP 0034.scaffold00131 301118 1 A G - ReadM INDEL 0034.scaffold00131 301173 1 A . - ReadM SNP 0034.scaffold00131 301309 1 C G - ReadM SNP 0034.scaffold00131 301353 1 A T - ReadM SNP 0034.scaffold00131 301358 1 C G - ReadM SNP 0034.scaffold00131 301426 1 A G - ReadM SNP 0034.scaffold00131 301458 1 G A - ReadM SNP 0034.scaffold00131 301472 1 G A - ReadM SNP 0034.scaffold00131 301506 1 A G - ReadM SNP 0034.scaffold00131 301515 1 T C - ReadM SNP 0034.scaffold00131 301563 1 A C - ReadM SNP 0034.scaffold00131 301613 1 G T - ReadM SNP 0034.scaffold00131 301654 1 C G - ReadM SNP 0034.scaffold00131 301685 1 T G - ReadM INDEL 0034.scaffold00131 303521 1 . A - ReadM SNP 0034.scaffold00131 303538 1 C T - ReadM SNP 0034.scaffold00131 304405 1 A G - ReadM SNP 0034.scaffold00131 304865 1 G A - ScafM SNP 0034.scaffold00131 304986 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 304999 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 305025 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 305080 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 305099 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 305104 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 305106 2 GG CA scaffold4447 ScafM SNP 0034.scaffold00131 305110 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 305138 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 305140 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 305162 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 305841 2 GG CT scaffold4447 ScafM SNP 0034.scaffold00131 305878 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 305885 1 T . scaffold4447 ScafM INDEL 0034.scaffold00131 305892 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 305897 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 305907 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 305935 2 GG .A scaffold4447 ScafM SNP 0034.scaffold00131 305939 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 305941 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 305943 3 ATC TAG scaffold4447 ScafM SNP 0034.scaffold00131 305949 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 305952 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 305955 1 G C scaffold4447 ScafM INDEL 0034.scaffold00131 305957 2 AT .. scaffold4447 ScafM SNP 0034.scaffold00131 305962 3 GTT ACA scaffold4447 ScafM INDEL 0034.scaffold00131 305966 2 .. CC scaffold4447 ScafM INDEL 0034.scaffold00131 305971 1 . G scaffold4447 ScafM SNP 0034.scaffold00131 305987 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 306069 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 306102 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 306105 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 306110 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 306117 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 306145 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 306176 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 306225 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 306230 2 AA CC scaffold4447 Both SNP 0034.scaffold00131 306316 1 T C scaffold4447 Both SNP 0034.scaffold00131 306381 1 C T scaffold4447 Both SNP 0034.scaffold00131 306530 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 306538 1 T A scaffold4447 Both SNP 0034.scaffold00131 306554 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 306578 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 306620 1 T . scaffold4447 ScafM INDEL 0034.scaffold00131 307544 1 . T scaffold4447 ScafM INDEL 0034.scaffold00131 307575 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 307600 1 T G scaffold4447 ScafM INDEL 0034.scaffold00131 307621 2 TT .A scaffold4447 ScafM SNP 0034.scaffold00131 307628 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 307630 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 307637 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 307643 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 307653 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 307760 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 307788 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 307810 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 307841 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 307843 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 307885 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 308100 1 C A scaffold4447 ReadM SNP 0034.scaffold00131 308181 1 G A - ReadM SNP 0034.scaffold00131 308202 1 A C - ScafM SNP 0034.scaffold00131 308548 1 G T scaffold6568 ScafM SNP 0034.scaffold00131 308556 1 A C scaffold6568 ScafM SNP 0034.scaffold00131 308563 1 G A scaffold6568 ScafM SNP 0034.scaffold00131 308571 1 C G scaffold6568 ScafM SNP 0034.scaffold00131 308580 1 T C scaffold6568 ScafM INDEL 0034.scaffold00131 308604 1 T . scaffold6568 ScafM SNP 0034.scaffold00131 308615 1 T C scaffold6568 ScafM INDEL 0034.scaffold00131 308644 1 T . scaffold6568 ScafM SNP 0034.scaffold00131 308665 1 C T scaffold6568 ScafM SNP 0034.scaffold00131 308695 1 A G scaffold6568 ScafM SNP 0034.scaffold00131 308738 1 G T scaffold6568 ScafM SNP 0034.scaffold00131 308771 1 A G scaffold6568 ScafM INDEL 0034.scaffold00131 308773 2 CA .T scaffold6568 ScafM SNP 0034.scaffold00131 308776 1 T C scaffold6568 ScafM INDEL 0034.scaffold00131 308779 1 . A scaffold6568 ScafM SNP 0034.scaffold00131 308783 1 T C scaffold6568 ScafM SNP 0034.scaffold00131 308794 1 G A scaffold6568 ScafM SNP 0034.scaffold00131 308800 1 A G scaffold6568 ScafM SNP 0034.scaffold00131 308805 1 C T scaffold6568 ScafM SNP 0034.scaffold00131 308807 1 C T scaffold6568 ScafM SNP 0034.scaffold00131 308813 1 A G scaffold6568 ScafM INDEL 0034.scaffold00131 308841 1 A . scaffold6568 ScafM SNP 0034.scaffold00131 308845 1 C T scaffold6568 ScafM SNP 0034.scaffold00131 312809 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 312822 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 312827 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 312833 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 312849 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 312869 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 312899 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 312905 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 312910 1 C T scaffold4447 Both SNP 0034.scaffold00131 312938 1 A G scaffold4447 Both SNP 0034.scaffold00131 312953 1 T C scaffold4447 Both SNP 0034.scaffold00131 312971 1 A G scaffold4447 Both SNP 0034.scaffold00131 313036 1 T C scaffold4447 Both SNP 0034.scaffold00131 313087 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 313128 11 ........... GTTGGTGGCGT scaffold4447 ReadM SNP 0034.scaffold00131 313130 1 C T - ScafM INDEL 0034.scaffold00131 313130 14 .............. GTAGGAGAGAGGGT scaffold4447 ScafM SNP 0034.scaffold00131 313177 2 AA GG scaffold4447 ScafM INDEL 0034.scaffold00131 313212 8 AAATGAGG ........ scaffold4447 ScafM SNP 0034.scaffold00131 313251 2 CA TC scaffold4447 Both SNP 0034.scaffold00131 313314 1 A G scaffold4447 ReadM SNP 0034.scaffold00131 313341 1 C T - ReadM INDEL 0034.scaffold00131 313382 1 A . - ReadM SNP 0034.scaffold00131 313471 1 A G - ReadM SNP 0034.scaffold00131 313629 1 T G - ReadM SNP 0034.scaffold00131 313639 1 A G - ReadM SNP 0034.scaffold00131 313669 1 C T - Both SNP 0034.scaffold00131 313699 1 G A scaffold4447 ReadM INDEL 0034.scaffold00131 313720 1 C . - ReadM SNP 0034.scaffold00131 313730 1 A C - ReadM SNP 0034.scaffold00131 313806 1 A G - ReadM SNP 0034.scaffold00131 313888 1 G A - ReadM SNP 0034.scaffold00131 313895 1 G A - ReadM SNP 0034.scaffold00131 313975 1 C A - ScafM SNP 0034.scaffold00131 314047 1 T G scaffold4447 Both SNP 0034.scaffold00131 314103 1 T A scaffold4447 Both SNP 0034.scaffold00131 314135 1 C T scaffold4447 Both SNP 0034.scaffold00131 314211 1 A G scaffold4447 Both SNP 0034.scaffold00131 314227 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 314253 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 314287 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 314297 1 T G scaffold4447 ScafM INDEL 0034.scaffold00131 314307 3 ... CAT scaffold4447 ScafM SNP 0034.scaffold00131 314318 1 A G scaffold4447 ReadM SNP 0034.scaffold00131 314383 1 G A - ReadM SNP 0034.scaffold00131 314418 1 A C - ReadM SNP 0034.scaffold00131 314514 1 G A - ReadM SNP 0034.scaffold00131 314680 1 C T - ReadM SNP 0034.scaffold00131 314725 1 G A - ReadM SNP 0034.scaffold00131 314741 1 A C - ReadM SNP 0034.scaffold00131 314761 1 G A - ReadM SNP 0034.scaffold00131 314841 1 A C - ReadM SNP 0034.scaffold00131 314882 1 A C - ReadM SNP 0034.scaffold00131 315126 1 G A - ReadM SNP 0034.scaffold00131 315130 1 G T - ReadM SNP 0034.scaffold00131 315172 1 G T - ReadM SNP 0034.scaffold00131 315204 1 A C - ReadM SNP 0034.scaffold00131 315289 1 A C - ReadM SNP 0034.scaffold00131 315312 1 G T - ReadM SNP 0034.scaffold00131 315331 1 T A - ReadM SNP 0034.scaffold00131 315492 1 G A - ReadM SNP 0034.scaffold00131 315656 1 G C - ReadM SNP 0034.scaffold00131 315728 1 T C - ReadM SNP 0034.scaffold00131 315782 1 G A - ReadM SNP 0034.scaffold00131 315791 1 C G - ReadM SNP 0034.scaffold00131 316013 1 C G - ReadM INDEL 0034.scaffold00131 316033 1 . A - ReadM SNP 0034.scaffold00131 316105 1 T C - ReadM SNP 0034.scaffold00131 316145 1 C T - ReadM SNP 0034.scaffold00131 316167 1 C A - ReadM SNP 0034.scaffold00131 316235 1 A G - ReadM SNP 0034.scaffold00131 316254 1 T C - ReadM SNP 0034.scaffold00131 316288 1 T G - ReadM SNP 0034.scaffold00131 316316 1 T C - ReadM SNP 0034.scaffold00131 316370 1 G A - ReadM SNP 0034.scaffold00131 316410 1 A G - ReadM SNP 0034.scaffold00131 316507 1 G A - ScafM INDEL 0034.scaffold00131 316605 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 316609 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 316611 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 316624 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 316649 1 A G scaffold4447 Both SNP 0034.scaffold00131 316835 1 A T scaffold4447 Both SNP 0034.scaffold00131 316870 1 A T scaffold4447 Both SNP 0034.scaffold00131 316915 1 C G scaffold4447 Both SNP 0034.scaffold00131 316944 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 316954 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 316981 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 316999 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 317016 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 317041 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 317069 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 317100 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 317114 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 317148 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 317166 2 CG TC scaffold4447 ScafM SNP 0034.scaffold00131 317184 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 317221 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 317259 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 317262 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 317279 1 A T scaffold4447 Both SNP 0034.scaffold00131 317297 1 G A scaffold4447 Both SNP 0034.scaffold00131 317319 1 G A scaffold4447 Both SNP 0034.scaffold00131 317385 1 T G scaffold4447 Both SNP 0034.scaffold00131 317496 1 G A scaffold4447 Both SNP 0034.scaffold00131 317629 1 G T scaffold4447 Both SNP 0034.scaffold00131 317645 1 T C scaffold4447 Both SNP 0034.scaffold00131 317666 1 A G scaffold4447 Both SNP 0034.scaffold00131 317740 1 G A scaffold4447 Both INDEL 0034.scaffold00131 317795 1 A . scaffold4447 Both SNP 0034.scaffold00131 317840 1 C T scaffold4447 Both SNP 0034.scaffold00131 318006 1 C T scaffold4447 Both SNP 0034.scaffold00131 318028 1 T C scaffold4447 Both SNP 0034.scaffold00131 318035 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 318041 1 G A scaffold4447 Both SNP 0034.scaffold00131 318189 1 T C scaffold4447 ReadM SNP 0034.scaffold00131 318234 1 G T - ReadM SNP 0034.scaffold00131 318254 1 T G - ReadM SNP 0034.scaffold00131 318298 1 G A - Both SNP 0034.scaffold00131 318384 1 A G scaffold4447 Both SNP 0034.scaffold00131 318408 1 C T scaffold4447 Both SNP 0034.scaffold00131 318415 1 G A scaffold4447 Both SNP 0034.scaffold00131 318485 1 G T scaffold4447 Both SNP 0034.scaffold00131 318507 1 T C scaffold4447 Both SNP 0034.scaffold00131 318548 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 318553 1 C T scaffold4447 Both SNP 0034.scaffold00131 318618 1 G A scaffold4447 Both SNP 0034.scaffold00131 318624 1 C T scaffold4447 Both SNP 0034.scaffold00131 318679 1 A T scaffold4447 Both SNP 0034.scaffold00131 318685 1 A G scaffold4447 Both SNP 0034.scaffold00131 318747 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 318801 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 318823 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 318825 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 318832 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 318866 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 318890 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 318892 1 C G scaffold4447 Both SNP 0034.scaffold00131 319026 1 A G scaffold4447 Both SNP 0034.scaffold00131 319035 1 C T scaffold4447 Both SNP 0034.scaffold00131 319058 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 319066 1 T C scaffold4447 Both SNP 0034.scaffold00131 319085 1 A G scaffold4447 Both SNP 0034.scaffold00131 319155 1 A G scaffold4447 Both SNP 0034.scaffold00131 319246 1 C A scaffold4447 Both SNP 0034.scaffold00131 319256 1 A C scaffold4447 Both SNP 0034.scaffold00131 319340 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 319722 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 319791 2 GC .T scaffold4447 ScafM SNP 0034.scaffold00131 319817 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 319819 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 319833 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 319906 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 319993 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 319998 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 320122 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 320153 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 320230 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 320262 1 C T scaffold4447 Both INDEL 0034.scaffold00131 320307 1 . T scaffold4447 ReadM SNP 0034.scaffold00131 320322 1 A G - ReadM SNP 0034.scaffold00131 320364 1 G A - ReadM SNP 0034.scaffold00131 320397 1 G A - ReadM SNP 0034.scaffold00131 320452 1 G T - ReadM SNP 0034.scaffold00131 320472 1 T A - ReadM SNP 0034.scaffold00131 320479 1 G C - ReadM SNP 0034.scaffold00131 320581 1 A T - ScafM SNP 0034.scaffold00131 320631 1 G T scaffold4447 Both SNP 0034.scaffold00131 320661 1 T C scaffold4447 Both SNP 0034.scaffold00131 320741 1 G C scaffold4447 Both SNP 0034.scaffold00131 320755 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 320795 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 320832 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 320842 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 320870 4 TCGT .... scaffold4447 Both SNP 0034.scaffold00131 320968 1 A G scaffold4447 Both SNP 0034.scaffold00131 321008 1 C A scaffold4447 Both INDEL 0034.scaffold00131 321011 1 A . scaffold4447 ScafM INDEL 0034.scaffold00131 321072 2 TG .. scaffold4447 ScafM INDEL 0034.scaffold00131 321076 13 TTTCTTTTGGGGT ............. scaffold4447 ScafM INDEL 0034.scaffold00131 321090 14 CGGGGTTTTTTTTT .............. scaffold4447 ScafM SNP 0034.scaffold00131 321106 1 G A scaffold4447 Both SNP 0034.scaffold00131 321159 1 A C scaffold4447 Both SNP 0034.scaffold00131 321199 1 G T scaffold4447 Both SNP 0034.scaffold00131 321246 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 321293 2 AA GG scaffold4447 ScafM SNP 0034.scaffold00131 321297 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 321330 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 321344 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 321386 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 321434 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 321443 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 321453 1 C T scaffold4447 Both SNP 0034.scaffold00131 321464 1 C A scaffold4447 Both SNP 0034.scaffold00131 321605 1 A C scaffold4447 Both SNP 0034.scaffold00131 321657 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 321683 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 321697 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 321710 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 321714 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 321723 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 321750 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 321765 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 321776 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 321813 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 321897 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 321917 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 321934 1 T C scaffold4447 Both SNP 0034.scaffold00131 321971 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 322026 2 GC TT scaffold4447 ScafM SNP 0034.scaffold00131 322076 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 322080 2 TT AA scaffold4447 Both SNP 0034.scaffold00131 322137 1 A G scaffold4447 Both SNP 0034.scaffold00131 322168 1 T C scaffold4447 Both SNP 0034.scaffold00131 322186 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 322206 1 T . scaffold4447 Both INDEL 0034.scaffold00131 322231 1 . A scaffold4447 Both SNP 0034.scaffold00131 322249 1 T G scaffold4447 Both SNP 0034.scaffold00131 322316 1 C A scaffold4447 Both SNP 0034.scaffold00131 322338 1 T A scaffold4447 ScafM INDEL 0034.scaffold00131 322352 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 322354 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 322390 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 322408 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 322448 1 . A scaffold4447 ScafM SNP 0034.scaffold00131 322451 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 322476 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 322490 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 322501 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 322503 1 A G scaffold4447 Both SNP 0034.scaffold00131 322532 1 G A scaffold4447 Both SNP 0034.scaffold00131 322562 1 A G scaffold4447 Both SNP 0034.scaffold00131 322611 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 322637 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 322645 1 C T scaffold4447 Both SNP 0034.scaffold00131 322683 1 A T scaffold4447 Both SNP 0034.scaffold00131 322712 1 G A scaffold4447 Both SNP 0034.scaffold00131 322731 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 322794 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 322798 3 GAA ... scaffold4447 ScafM SNP 0034.scaffold00131 322809 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 322846 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 322868 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 322901 8 CAGGTCAA ........ scaffold4447 ReadM SNP 0034.scaffold00131 323009 1 A G - ReadM SNP 0034.scaffold00131 323162 1 G T - ReadM SNP 0034.scaffold00131 323197 1 T G - ReadM INDEL 0034.scaffold00131 323543 2 CC .. - ReadM SNP 0034.scaffold00131 323652 1 A C - ReadM SNP 0034.scaffold00131 323721 1 G A - ReadM SNP 0034.scaffold00131 323731 1 T C - ReadM SNP 0034.scaffold00131 323750 1 T A - ReadM SNP 0034.scaffold00131 323850 1 G A - ScafM SNP 0034.scaffold00131 323898 1 G T scaffold4447 Both SNP 0034.scaffold00131 323931 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 323946 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 323973 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 323975 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 324008 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 324045 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 324061 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 324093 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 324097 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 324143 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 324152 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 324158 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 324174 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 324234 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 324244 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 324282 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 324285 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 324323 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 324327 1 A G scaffold4447 ReadM SNP 0034.scaffold00131 324467 1 A G - ReadM SNP 0034.scaffold00131 324527 1 C T - ReadM SNP 0034.scaffold00131 324533 1 T G - ReadM SNP 0034.scaffold00131 324748 1 C G - ReadM SNP 0034.scaffold00131 324759 1 C T - ReadM SNP 0034.scaffold00131 324903 1 T C - ReadM SNP 0034.scaffold00131 324932 1 C A - ReadM INDEL 0034.scaffold00131 324973 1 . C - ScafM SNP 0034.scaffold00131 355537 1 A C scaffold10182 ScafM SNP 0034.scaffold00131 355895 1 A C scaffold236 ReadM INDEL 0034.scaffold00131 391821 3 ... CTG - ReadM INDEL 0034.scaffold00131 391975 2 .. AA - ReadM SNP 0034.scaffold00131 392023 1 T C - ReadM SNP 0034.scaffold00131 392045 1 C A - ReadM SNP 0034.scaffold00131 392078 1 T A - ReadM SNP 0034.scaffold00131 392191 1 A G - ReadM SNP 0034.scaffold00131 392198 1 C A - ScafM INDEL 0034.scaffold00131 392264 1 C . scaffold4447 ScafM SNP 0034.scaffold00131 392269 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 392274 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 392276 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 392324 1 A G scaffold4447 Both SNP 0034.scaffold00131 392359 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 392396 1 A G scaffold4447 Both SNP 0034.scaffold00131 392442 1 T C scaffold4447 ReadM SNP 0034.scaffold00131 393806 1 T C - ScafM SNP 0034.scaffold00131 393832 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 393836 1 . T scaffold4447 ScafM SNP 0034.scaffold00131 393838 1 G A scaffold4447 Both SNP 0034.scaffold00131 393975 1 G A scaffold4447 Both SNP 0034.scaffold00131 394008 1 C T scaffold4447 ReadM SNP 0034.scaffold00131 394062 1 A T - ReadM SNP 0034.scaffold00131 394137 1 A G - ReadM SNP 0034.scaffold00131 394490 1 G A - Both SNP 0034.scaffold00131 394522 1 C T scaffold4447 ReadM SNP 0034.scaffold00131 394591 1 C T - ReadM SNP 0034.scaffold00131 394616 1 C T - ReadM INDEL 0034.scaffold00131 394674 1 A . - Both INDEL 0034.scaffold00131 394678 1 G . scaffold4447 Both SNP 0034.scaffold00131 394711 1 C A scaffold4447 ReadM INDEL 0034.scaffold00131 394795 1 G . - ReadM SNP 0034.scaffold00131 394804 1 A T - ReadM SNP 0034.scaffold00131 394865 1 A G - ReadM SNP 0034.scaffold00131 394916 1 G A - Both INDEL 0034.scaffold00131 395066 1 . C scaffold4447 Both SNP 0034.scaffold00131 395078 1 G A scaffold4447 Both SNP 0034.scaffold00131 395120 1 A C scaffold4447 Both SNP 0034.scaffold00131 395151 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 395183 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 395216 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 395258 2 GT CC scaffold4447 ScafM INDEL 0034.scaffold00131 395278 7 ....... AAATCTA scaffold4447 ScafM SNP 0034.scaffold00131 395300 1 A T scaffold4447 ReadM SNP 0034.scaffold00131 395702 1 A G - ReadM SNP 0034.scaffold00131 395763 1 T C - ReadM SNP 0034.scaffold00131 395801 1 G A - Both SNP 0034.scaffold00131 395976 1 G A scaffold4447 Both SNP 0034.scaffold00131 396038 1 T C scaffold4447 Both SNP 0034.scaffold00131 396043 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 396269 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 396338 2 TC AT scaffold4447 ScafM SNP 0034.scaffold00131 396352 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 396366 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 396401 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 396420 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 396423 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 396512 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 396556 1 A T scaffold4447 ScafM INDEL 0034.scaffold00131 396558 10 GGAAGGGAAC .......... scaffold4447 ScafM SNP 0034.scaffold00131 396572 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 396602 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 396617 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 396630 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 396668 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 396698 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 396700 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 396703 1 G . scaffold4447 ScafM SNP 0034.scaffold00131 396726 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 396741 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 396746 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 396754 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 396785 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 396799 2 TC CT scaffold4447 ReadM SNP 0034.scaffold00131 396902 1 T C - ReadM SNP 0034.scaffold00131 396939 1 T G - ReadM SNP 0034.scaffold00131 397209 1 C T - ReadM SNP 0034.scaffold00131 397238 1 A G - ReadM SNP 0034.scaffold00131 397249 1 C T - ReadM SNP 0034.scaffold00131 397442 1 A G - ReadM SNP 0034.scaffold00131 397472 1 A G - ReadM SNP 0034.scaffold00131 397497 1 C A - ReadM INDEL 0034.scaffold00131 397675 1 . A - ReadM SNP 0034.scaffold00131 397685 1 A T - ReadM SNP 0034.scaffold00131 397748 1 T C - ReadM INDEL 0034.scaffold00131 397830 1 G . - ReadM SNP 0034.scaffold00131 397901 1 C A - ReadM SNP 0034.scaffold00131 397945 1 A G - ReadM SNP 0034.scaffold00131 398028 1 T C - ReadM SNP 0034.scaffold00131 398049 1 G A - ReadM SNP 0034.scaffold00131 398086 1 G A - ReadM SNP 0034.scaffold00131 398210 1 C A - ReadM SNP 0034.scaffold00131 398223 1 G A - ReadM SNP 0034.scaffold00131 398225 1 G T - ReadM SNP 0034.scaffold00131 398260 1 T G - ReadM SNP 0034.scaffold00131 398303 1 G T - ReadM SNP 0034.scaffold00131 398315 1 A T - ReadM SNP 0034.scaffold00131 398374 1 C T - ReadM SNP 0034.scaffold00131 398415 1 A G - ReadM SNP 0034.scaffold00131 398446 1 G A - ReadM SNP 0034.scaffold00131 398484 1 C T - ReadM SNP 0034.scaffold00131 398563 1 A G - ReadM SNP 0034.scaffold00131 398608 1 G A - ReadM SNP 0034.scaffold00131 398671 1 T C - ReadM SNP 0034.scaffold00131 398683 1 T C - ReadM SNP 0034.scaffold00131 398798 1 T A - ReadM SNP 0034.scaffold00131 398849 1 G A - ReadM SNP 0034.scaffold00131 398892 1 A C - ReadM SNP 0034.scaffold00131 398896 1 T C - ReadM SNP 0034.scaffold00131 398958 1 C T - ReadM SNP 0034.scaffold00131 398973 1 C T - ReadM SNP 0034.scaffold00131 399060 1 T C - ReadM SNP 0034.scaffold00131 399089 1 C A - ReadM SNP 0034.scaffold00131 399118 1 G A - ReadM SNP 0034.scaffold00131 399150 1 C T - ReadM SNP 0034.scaffold00131 399164 1 G T - ReadM SNP 0034.scaffold00131 399395 1 A T - ReadM SNP 0034.scaffold00131 399476 1 G T - ReadM SNP 0034.scaffold00131 399486 1 C T - ReadM SNP 0034.scaffold00131 399559 1 A G - ReadM SNP 0034.scaffold00131 399611 1 G T - ReadM SNP 0034.scaffold00131 399824 1 T C - ReadM SNP 0034.scaffold00131 399829 1 T C - ReadM SNP 0034.scaffold00131 400321 1 A C - ReadM SNP 0034.scaffold00131 400370 1 A G - ReadM INDEL 0034.scaffold00131 400409 1 . C - ReadM SNP 0034.scaffold00131 400473 1 A C - ReadM SNP 0034.scaffold00131 400475 1 A G - ReadM SNP 0034.scaffold00131 400479 1 A G - ReadM SNP 0034.scaffold00131 400525 1 C T - ReadM SNP 0034.scaffold00131 400559 1 A T - ReadM SNP 0034.scaffold00131 400672 1 T C - ReadM SNP 0034.scaffold00131 400687 1 G A - ReadM SNP 0034.scaffold00131 400730 1 C G - ReadM SNP 0034.scaffold00131 400755 1 G T - ReadM SNP 0034.scaffold00131 401193 1 T G - ReadM INDEL 0034.scaffold00131 401224 1 . T - ReadM SNP 0034.scaffold00131 401293 1 G A - ReadM SNP 0034.scaffold00131 401307 1 G A - ReadM SNP 0034.scaffold00131 401372 1 G T - Both SNP 0034.scaffold00131 401376 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 401425 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 401440 2 CT TA scaffold4447 ScafM SNP 0034.scaffold00131 401445 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 401453 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 401459 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 401484 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 401494 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 401504 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 401538 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 401564 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 401618 1 T C scaffold4447 Both SNP 0034.scaffold00131 401633 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 401655 8 AGGGTTGA ........ scaffold4447 ScafM SNP 0034.scaffold00131 401669 1 T G scaffold4447 Both SNP 0034.scaffold00131 401691 1 C T scaffold4447 Both SNP 0034.scaffold00131 401694 1 A G scaffold4447 Both SNP 0034.scaffold00131 401767 1 A T scaffold4447 Both SNP 0034.scaffold00131 401802 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 401809 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 401818 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 401834 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 401858 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 401874 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 401878 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 401911 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 401915 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 401941 1 G A scaffold4447 ScafM INDEL 0034.scaffold00131 402014 49 TATTGTACATCACTGATTTTACTCTCCCAAATATACTTCCTATCTTGTG ................................................. scaffold4447 ScafM INDEL 0034.scaffold00131 402065 2 AG .. scaffold4447 ScafM SNP 0034.scaffold00131 402080 2 GT AG scaffold4447 ScafM SNP 0034.scaffold00131 402160 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 402163 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 402191 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 402201 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 402212 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 402258 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 402285 5 CAGTA ..... scaffold4447 ScafM SNP 0034.scaffold00131 402310 1 A G scaffold4447 Both SNP 0034.scaffold00131 402359 1 C A scaffold4447 Both SNP 0034.scaffold00131 402375 1 A T scaffold4447 Both SNP 0034.scaffold00131 402429 1 A T scaffold4447 Both SNP 0034.scaffold00131 402437 1 A G scaffold4447 Both SNP 0034.scaffold00131 402461 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 402487 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 402502 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 402518 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 402523 2 GT CA scaffold4447 ScafM SNP 0034.scaffold00131 402532 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 402547 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 402563 1 T C scaffold4447 Both SNP 0034.scaffold00131 402586 1 A G scaffold4447 Both SNP 0034.scaffold00131 402612 1 A G scaffold4447 Both SNP 0034.scaffold00131 402621 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 402721 2 CA GG scaffold4447 ScafM SNP 0034.scaffold00131 402746 1 T C scaffold4447 Both SNP 0034.scaffold00131 402773 1 C T scaffold4447 Both SNP 0034.scaffold00131 402880 1 A G scaffold4447 Both SNP 0034.scaffold00131 402919 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 402937 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 402978 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 403007 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 403036 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 403047 2 .. TT scaffold4447 ScafM SNP 0034.scaffold00131 403082 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 403545 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 403588 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 403640 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 403645 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 403659 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 403710 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 403760 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 403769 1 A G scaffold4447 ScafM INDEL 0034.scaffold00131 403782 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 403784 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 403788 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 403804 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 403858 2 TC CT scaffold4447 ScafM SNP 0034.scaffold00131 403878 1 T C scaffold4447 ScafM INDEL 0034.scaffold00131 403917 2 .. AA scaffold4447 ScafM SNP 0034.scaffold00131 403921 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 403928 1 G A scaffold4447 ReadM SNP 0034.scaffold00131 404067 1 G A - ReadM SNP 0034.scaffold00131 404081 1 A T - ReadM SNP 0034.scaffold00131 404161 1 A G - ReadM SNP 0034.scaffold00131 404193 1 A T - ScafM SNP 0034.scaffold00131 404631 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 404633 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 404658 1 C G scaffold4447 ScafM INDEL 0034.scaffold00131 404668 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 404676 1 C G scaffold4447 ScafM INDEL 0034.scaffold00131 404714 1 T . scaffold4447 Both SNP 0034.scaffold00131 404745 1 C A scaffold4447 Both SNP 0034.scaffold00131 404760 1 T C scaffold4447 Both SNP 0034.scaffold00131 404831 1 T C scaffold4447 Both SNP 0034.scaffold00131 404834 1 T C scaffold4447 Both SNP 0034.scaffold00131 404874 1 C G scaffold4447 Both SNP 0034.scaffold00131 404917 1 C T scaffold4447 ReadM SNP 0034.scaffold00131 408871 1 T C - ReadM SNP 0034.scaffold00131 408956 1 G A - ReadM SNP 0034.scaffold00131 408971 1 C T - ReadM SNP 0034.scaffold00131 409049 1 T C - ReadM SNP 0034.scaffold00131 409065 1 C T - ReadM SNP 0034.scaffold00131 409078 1 G T - ReadM SNP 0034.scaffold00131 409143 1 C T - ReadM SNP 0034.scaffold00131 409184 1 G A - ReadM SNP 0034.scaffold00131 409204 1 A T - ReadM SNP 0034.scaffold00131 409261 1 T C - ReadM SNP 0034.scaffold00131 409743 1 T G - ReadM SNP 0034.scaffold00131 410127 1 G C - ReadM SNP 0034.scaffold00131 410145 1 A G - ReadM SNP 0034.scaffold00131 410173 1 A G - ReadM SNP 0034.scaffold00131 413955 1 G A - ReadM SNP 0034.scaffold00131 414028 1 A C - ScafM SNP 0034.scaffold00131 414937 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 414998 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 415024 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 415296 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 415328 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 415353 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 415373 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 415375 1 G T scaffold4447 ScafM SNP 0034.scaffold00131 415392 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 415476 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 415499 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 415503 2 TC CT scaffold4447 ScafM SNP 0034.scaffold00131 415526 2 TC CA scaffold4447 ScafM SNP 0034.scaffold00131 415529 1 A G scaffold4447 Both SNP 0034.scaffold00131 415622 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 415641 1 C T scaffold4447 Both SNP 0034.scaffold00131 415646 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 416054 1 C G scaffold4447 ScafM INDEL 0034.scaffold00131 416069 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 416134 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 416180 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 416225 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 416247 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 416287 1 T A scaffold4447 ScafM INDEL 0034.scaffold00131 416291 2 AA .. scaffold4447 Both SNP 0034.scaffold00131 416402 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 416461 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 416505 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 416511 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 416534 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 416565 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 416569 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 416596 2 AA TG scaffold4447 ScafM SNP 0034.scaffold00131 416599 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 417048 6 ...... ATAATA scaffold4447 ScafM INDEL 0034.scaffold00131 417121 1 A . scaffold4447 ScafM INDEL 0034.scaffold00131 417125 1 A . scaffold4447 ScafM SNP 0034.scaffold00131 417132 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 417142 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 417161 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 417195 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 417208 1 T A scaffold4447 ScafM INDEL 0034.scaffold00131 417219 3 AAC ... scaffold4447 ScafM SNP 0034.scaffold00131 417239 1 A C scaffold4447 ScafM INDEL 0034.scaffold00131 417285 1 T . scaffold4447 ScafM SNP 0034.scaffold00131 417317 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 417336 2 .. AT scaffold4447 ScafM SNP 0034.scaffold00131 417348 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 417356 1 T C scaffold4447 ReadM SNP 0034.scaffold00131 417677 1 G C - Both SNP 0034.scaffold00131 417747 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 418141 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 418153 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 418307 1 G A scaffold4447 Both SNP 0034.scaffold00131 418327 1 G A scaffold4447 Both INDEL 0034.scaffold00131 418404 1 T . scaffold4447 Both SNP 0034.scaffold00131 418425 1 C T scaffold4447 Both SNP 0034.scaffold00131 418476 1 G A scaffold4447 ReadM SNP 0034.scaffold00131 418493 1 C A - ReadM SNP 0034.scaffold00131 418591 1 A G - ReadM SNP 0034.scaffold00131 418602 1 G A - Both SNP 0034.scaffold00131 418754 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 418851 1 A T scaffold4447 ScafM SNP 0034.scaffold00131 418854 2 TC CT scaffold4447 ScafM SNP 0034.scaffold00131 418861 1 T A scaffold4447 ScafM SNP 0034.scaffold00131 418909 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 418984 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 418998 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 419020 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 419032 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 419053 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 419067 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 419105 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 419131 1 T G scaffold4447 ScafM SNP 0034.scaffold00131 427754 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 427795 1 G C scaffold4447 ScafM SNP 0034.scaffold00131 427822 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 427863 1 C T scaffold4447 ScafM SNP 0034.scaffold00131 427896 1 C G scaffold4447 ScafM SNP 0034.scaffold00131 427903 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 427908 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 427912 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 427939 1 T C scaffold4447 ScafM SNP 0034.scaffold00131 427977 1 C A scaffold4447 ScafM SNP 0034.scaffold00131 427979 1 T C scaffold4447 Both SNP 0034.scaffold00131 428045 1 G A scaffold4447 ScafM SNP 0034.scaffold00131 428091 1 C T scaffold4447 ScafM INDEL 0034.scaffold00131 428099 8 CGGAAAGC ........ scaffold4447 ScafM INDEL 0034.scaffold00131 428108 2 CC .. scaffold4447 ScafM SNP 0034.scaffold00131 428137 1 A G scaffold4447 ScafM SNP 0034.scaffold00131 428144 1 A C scaffold4447 ScafM SNP 0034.scaffold00131 428153 1 C T scaffold4447 Both SNP 0034.scaffold00131 428200 1 T C scaffold4447 Both SNP 0034.scaffold00131 428305 1 T G scaffold4447 ReadM SNP 0034.scaffold00131 429112 1 C T - ReadM SNP 0034.scaffold00131 430424 1 T A - ReadM SNP 0034.scaffold00131 430464 1 G A - ScafM SNP 0034.scaffold00131 433462 1 C G scaffold44530 ScafM SNP 0034.scaffold00131 433533 1 G C scaffold44530 ScafM SNP 0034.scaffold00131 433568 1 C A scaffold44530 ScafM SNP 0034.scaffold00131 433573 1 A G scaffold44530 ScafM SNP 0034.scaffold00131 433578 1 A T scaffold44530 ScafM SNP 0034.scaffold00131 433628 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 433665 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 433685 1 C . scaffold5628 ScafM SNP 0034.scaffold00131 433692 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 433695 2 AC CG scaffold5628 ScafM SNP 0034.scaffold00131 433728 1 C G scaffold5628 ScafM INDEL 0034.scaffold00131 433762 1 G . scaffold5628 ScafM SNP 0034.scaffold00131 433771 1 G C scaffold5628 ScafM INDEL 0034.scaffold00131 433822 8 TCTTGATA ........ scaffold5628 ScafM SNP 0034.scaffold00131 433840 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 433905 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 433907 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 433917 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 433981 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 433989 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 434020 1 T A scaffold5628 ScafM INDEL 0034.scaffold00131 434056 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 434096 2 TG CA scaffold5628 ScafM SNP 0034.scaffold00131 434164 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 434172 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 434175 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 434179 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 434226 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 434230 3 AAC ... scaffold5628 ScafM SNP 0034.scaffold00131 434344 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 434349 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 434363 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 434366 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 434373 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 434381 1 A C scaffold5628 ScafM INDEL 0034.scaffold00131 434959 3 ... TTT scaffold5628 ScafM SNP 0034.scaffold00131 434960 4 AAAA TTTT scaffold5628 ScafM SNP 0034.scaffold00131 434965 4 AAAA TTTT scaffold5628 Both SNP 0034.scaffold00131 435021 1 T A scaffold5628 Both SNP 0034.scaffold00131 435058 1 G T scaffold5628 Both INDEL 0034.scaffold00131 435132 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 435310 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 435380 1 T . scaffold5628 ScafM SNP 0034.scaffold00131 435383 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 435390 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 435392 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 435407 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 435432 1 A . scaffold5628 ScafM INDEL 0034.scaffold00131 435444 2 AA .. scaffold5628 ScafM INDEL 0034.scaffold00131 435488 7 ....... TCATTTA scaffold5628 ScafM SNP 0034.scaffold00131 435506 1 T A scaffold5628 ScafM INDEL 0034.scaffold00131 435512 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 435685 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 435689 1 T A scaffold5628 ScafM INDEL 0034.scaffold00131 435718 14 .............. TCTTCTTTCTTCTT scaffold5628 ScafM SNP 0034.scaffold00131 435735 1 G C scaffold5628 ScafM INDEL 0034.scaffold00131 435741 2 .. TA scaffold5628 ScafM INDEL 0034.scaffold00131 435742 5 ..... TGAGT scaffold5628 ScafM SNP 0034.scaffold00131 436376 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 436378 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 436415 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 436441 1 C . scaffold5628 ScafM INDEL 0034.scaffold00131 436462 2 AA .. scaffold5628 ScafM SNP 0034.scaffold00131 436470 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 436541 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 436553 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 436566 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 436605 4 CAAC .... scaffold5628 ScafM SNP 0034.scaffold00131 436639 1 A G scaffold5628 Both SNP 0034.scaffold00131 436715 1 C T scaffold5628 Both SNP 0034.scaffold00131 436762 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 436836 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 436923 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 436933 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 436964 1 A . scaffold5628 ScafM INDEL 0034.scaffold00131 437007 1 C . scaffold5628 ScafM SNP 0034.scaffold00131 437031 3 CTA AGG scaffold5628 ScafM SNP 0034.scaffold00131 437108 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 437113 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 437129 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 437131 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 437141 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 439218 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 439243 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 439258 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 439264 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 439753 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 439775 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 439779 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 439813 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 439821 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 439823 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 439826 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 439832 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 439928 1 C T scaffold9867 ScafM INDEL 0034.scaffold00131 439944 1 . T scaffold9867 ScafM SNP 0034.scaffold00131 439970 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 439976 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 439982 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 439991 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 445457 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 445463 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 445481 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 445532 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 445541 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 445544 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 445548 1 G A scaffold9867 ScafM INDEL 0034.scaffold00131 445562 1 . G scaffold9867 ScafM INDEL 0034.scaffold00131 445600 1 . G scaffold9867 ScafM SNP 0034.scaffold00131 445623 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 445630 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 445666 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 446060 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 446082 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 446096 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 446131 2 AA TT scaffold9867 ScafM SNP 0034.scaffold00131 446152 1 G T scaffold9867 ScafM SNP 0034.scaffold00131 446164 1 G T scaffold9867 ScafM SNP 0034.scaffold00131 446214 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 446235 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 446252 1 G T scaffold9867 ScafM SNP 0034.scaffold00131 446299 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 446349 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 446351 1 A T scaffold9867 ScafM SNP 0034.scaffold00131 446362 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 446536 1 C T scaffold9867 ScafM INDEL 0034.scaffold00131 446549 1 . A scaffold9867 ScafM SNP 0034.scaffold00131 446664 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 446685 1 A T scaffold9867 ScafM SNP 0034.scaffold00131 446715 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 446792 1 A C scaffold9867 ScafM INDEL 0034.scaffold00131 446882 1 A . scaffold5628 ScafM INDEL 0034.scaffold00131 446931 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 447016 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 447031 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 447053 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 447060 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 447072 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 447099 1 G A scaffold5628 Both SNP 0034.scaffold00131 447213 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 447296 7 ....... AGAAGAC scaffold5628 ScafM SNP 0034.scaffold00131 447332 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 447367 1 A T scaffold5628 ReadM SNP 0034.scaffold00131 448450 1 G A - ReadM SNP 0034.scaffold00131 448789 1 G C - ReadM INDEL 0034.scaffold00131 448841 1 . T - ReadM SNP 0034.scaffold00131 448856 1 T C - ScafM SNP 0034.scaffold00131 448951 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 448958 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 448991 2 TG CC scaffold5628 Both SNP 0034.scaffold00131 449036 1 T C scaffold5628 Both SNP 0034.scaffold00131 449048 1 T C scaffold5628 Both SNP 0034.scaffold00131 449155 1 G T scaffold5628 Both SNP 0034.scaffold00131 449175 1 A C scaffold5628 Both SNP 0034.scaffold00131 449198 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 449245 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 449257 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 449287 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 449311 1 . T scaffold5628 ScafM INDEL 0034.scaffold00131 449325 1 . G scaffold5628 ScafM SNP 0034.scaffold00131 449328 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 449381 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 449393 2 TG GC scaffold5628 Both SNP 0034.scaffold00131 449468 1 T G scaffold5628 Both SNP 0034.scaffold00131 449526 1 T C scaffold5628 Both SNP 0034.scaffold00131 449580 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 449611 2 AC GT scaffold5628 ScafM SNP 0034.scaffold00131 449682 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 449686 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 449689 2 CA TG scaffold5628 Both INDEL 0034.scaffold00131 449758 1 . T scaffold5628 Both SNP 0034.scaffold00131 449814 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 449828 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 449859 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 449878 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 449914 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 449943 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 449952 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 449981 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 449990 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 450006 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 450028 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 450043 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 450057 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 450064 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 450086 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 450090 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 450094 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 450114 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 450349 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 450354 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 450357 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 450376 1 G C scaffold5628 ScafM INDEL 0034.scaffold00131 450380 5 ..... TTCAA scaffold5628 ScafM SNP 0034.scaffold00131 450411 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 450438 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 450740 1 G C scaffold3119 ScafM SNP 0034.scaffold00131 450749 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 450761 1 G A scaffold3119 ScafM INDEL 0034.scaffold00131 450769 1 T . scaffold3119 ScafM SNP 0034.scaffold00131 450772 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 450781 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 450789 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 450795 1 A C scaffold3119 ScafM SNP 0034.scaffold00131 450799 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 450810 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 450826 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 450837 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 450845 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 450895 1 A G scaffold3119 ScafM INDEL 0034.scaffold00131 450924 1 . C scaffold3119 ScafM INDEL 0034.scaffold00131 450928 1 G . scaffold3119 ScafM SNP 0034.scaffold00131 450934 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 450949 1 C A scaffold3119 ScafM SNP 0034.scaffold00131 451004 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 451015 2 GA AT scaffold3119 ScafM SNP 0034.scaffold00131 451018 1 A C scaffold3119 ScafM SNP 0034.scaffold00131 451023 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 451031 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 451173 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 451175 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 451178 1 G C scaffold3119 ScafM INDEL 0034.scaffold00131 451184 1 . T scaffold3119 ScafM SNP 0034.scaffold00131 451191 2 TG CA scaffold3119 ReadM SNP 0034.scaffold00131 451466 1 G A - ReadM SNP 0034.scaffold00131 451480 1 C T - ReadM SNP 0034.scaffold00131 454390 1 C T - ReadM SNP 0034.scaffold00131 455747 1 C T - ScafM INDEL 0034.scaffold00131 458106 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 458183 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 458187 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 458234 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 458240 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 458252 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 458270 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 460247 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 460249 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 460267 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 460288 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 460310 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 460321 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 460328 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 460348 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 460381 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 460403 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 461199 1 A T scaffold5628 ReadM SNP 0034.scaffold00131 461588 1 G A - ReadM SNP 0034.scaffold00131 461649 1 G T - ReadM SNP 0034.scaffold00131 461680 1 A G - ReadM SNP 0034.scaffold00131 463921 1 A T - ReadM SNP 0034.scaffold00131 463986 1 T G - ReadM SNP 0034.scaffold00131 464113 1 T G - ScafM INDEL 0034.scaffold00131 484340 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 484347 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 502261 1 A T scaffold19895 ScafM SNP 0034.scaffold00131 502291 1 A T scaffold19895 ScafM SNP 0034.scaffold00131 502302 1 A G scaffold19895 ScafM SNP 0034.scaffold00131 502349 1 T C scaffold19895 ScafM SNP 0034.scaffold00131 502351 1 A T scaffold19895 ScafM SNP 0034.scaffold00131 502368 1 C T scaffold19895 ScafM SNP 0034.scaffold00131 502375 1 A C scaffold19895 ScafM SNP 0034.scaffold00131 505539 1 G T scaffold19895 ScafM INDEL 0034.scaffold00131 505558 1 . A scaffold19895 ScafM INDEL 0034.scaffold00131 505559 1 . C scaffold19895 ScafM INDEL 0034.scaffold00131 505651 2 .. TT scaffold19895 ScafM SNP 0034.scaffold00131 506216 1 T C scaffold4048 ScafM SNP 0034.scaffold00131 506229 1 A G scaffold4048 ScafM SNP 0034.scaffold00131 506339 1 A G scaffold4048 ScafM INDEL 0034.scaffold00131 506346 5 GCGCA ..... scaffold4048 ScafM INDEL 0034.scaffold00131 506352 1 G . scaffold4048 ScafM SNP 0034.scaffold00131 513503 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 513506 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 513508 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 513514 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 513525 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 513535 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 513549 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 513598 2 AT GC scaffold5628 ScafM SNP 0034.scaffold00131 513620 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 513623 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 513680 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 513685 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 513687 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 513711 2 TC CT scaffold5628 ScafM SNP 0034.scaffold00131 513737 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 516723 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 517002 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 517023 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 517030 1 G C scaffold5628 ScafM INDEL 0034.scaffold00131 517040 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 517061 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 517062 2 .. TA scaffold5628 ScafM INDEL 0034.scaffold00131 517073 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 517078 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 517093 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 517098 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 517112 2 .A GG scaffold5628 ScafM SNP 0034.scaffold00131 517119 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 517164 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 517172 3 CAA TGG scaffold5628 ScafM INDEL 0034.scaffold00131 517186 10 .......... TGTGAAATGA scaffold5628 ScafM INDEL 0034.scaffold00131 517189 8 ........ CGAAGTCA scaffold5628 ScafM INDEL 0034.scaffold00131 517191 1 . C scaffold5628 ScafM SNP 0034.scaffold00131 517290 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 517297 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 517835 2 CC TT scaffold5628 ScafM SNP 0034.scaffold00131 517857 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 517868 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 517901 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 517911 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 517945 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 517948 1 T . scaffold5628 ScafM SNP 0034.scaffold00131 517953 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 517973 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 517983 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 517994 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 518094 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 518150 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 518163 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 518176 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 518182 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 518184 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 518301 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 518323 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 518338 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 518354 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 518393 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 518396 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 518444 1 T A scaffold9867 ScafM SNP 0034.scaffold00131 518455 1 G T scaffold9867 ScafM SNP 0034.scaffold00131 518461 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 518468 1 A T scaffold9867 ScafM SNP 0034.scaffold00131 518496 2 TG AA scaffold9867 ScafM SNP 0034.scaffold00131 518517 1 C T scaffold9867 ScafM INDEL 0034.scaffold00131 518544 2 .. CC scaffold9867 ScafM SNP 0034.scaffold00131 518549 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 518560 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 518565 1 T G scaffold9867 ScafM SNP 0034.scaffold00131 518605 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 518628 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 518630 2 CT AC scaffold9867 ScafM SNP 0034.scaffold00131 518670 1 T C scaffold9867 ScafM INDEL 0034.scaffold00131 518738 4 .... ACGC scaffold9867 ScafM INDEL 0034.scaffold00131 518771 1 . C scaffold9867 ScafM SNP 0034.scaffold00131 518807 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 518830 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 518842 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 518864 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 518889 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 518897 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 518903 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 518923 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 518931 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 518951 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 518967 1 . A scaffold5628 ScafM SNP 0034.scaffold00131 518991 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 519015 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 519035 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 519053 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 519066 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 519076 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 519086 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 519106 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 519126 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 519139 2 .. CT scaffold5628 ScafM SNP 0034.scaffold00131 519181 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 519195 1 G . scaffold5628 ScafM SNP 0034.scaffold00131 519217 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 519246 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 519272 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 519310 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 519376 4 TTTT .... scaffold5628 ScafM SNP 0034.scaffold00131 519381 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 519398 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 519415 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 519436 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 519453 1 T C scaffold5628 Both SNP 0034.scaffold00131 519597 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 519611 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 519651 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 519677 2 CT AG scaffold5628 ScafM SNP 0034.scaffold00131 519688 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 519700 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 519737 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 519752 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 519793 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 519799 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 519837 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 519854 1 T C scaffold5628 ScafM INDEL 0034.scaffold00131 519905 6 ...... TCCTGT scaffold5628 ScafM INDEL 0034.scaffold00131 519907 4 .... TCAA scaffold5628 ScafM SNP 0034.scaffold00131 519920 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 519922 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 519927 1 . G scaffold5628 ScafM SNP 0034.scaffold00131 519943 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 519949 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 520569 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 520575 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 520581 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 520605 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 520633 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 520693 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 520703 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 520705 1 C G scaffold9867 ScafM INDEL 0034.scaffold00131 520741 1 . G scaffold9867 Both INDEL 0034.scaffold00131 520781 1 . T scaffold9867 Both SNP 0034.scaffold00131 520822 1 T C scaffold9867 Both SNP 0034.scaffold00131 520845 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 520957 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 520973 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 521013 1 G A scaffold9867 ScafM INDEL 0034.scaffold00131 521049 1 T . scaffold9867 ScafM INDEL 0034.scaffold00131 521057 1 C . scaffold9867 ScafM SNP 0034.scaffold00131 521059 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 521064 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 521087 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 521217 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 521225 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 521229 1 G A scaffold5628 ReadM SNP 0034.scaffold00131 521267 1 C T - ScafM SNP 0034.scaffold00131 521282 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 521310 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 521313 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 521322 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 521421 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 521429 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 521439 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 521794 1 G A scaffold9867 ScafM INDEL 0034.scaffold00131 521808 6 ...... TGGATT scaffold9867 ScafM INDEL 0034.scaffold00131 521847 1 . T scaffold9867 ScafM SNP 0034.scaffold00131 521879 1 G A scaffold9867 ScafM INDEL 0034.scaffold00131 521906 2 .. TA scaffold9867 ScafM SNP 0034.scaffold00131 521923 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 521977 1 C T scaffold9867 ScafM INDEL 0034.scaffold00131 522001 1 . T scaffold9867 ScafM SNP 0034.scaffold00131 522005 1 A G scaffold9867 Both SNP 0034.scaffold00131 522015 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 522103 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 522122 1 C T scaffold9867 ScafM SNP 0034.scaffold00131 522157 1 G C scaffold9867 ScafM SNP 0034.scaffold00131 522172 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 522232 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 522258 1 T A scaffold9867 Both SNP 0034.scaffold00131 522290 1 C T scaffold9867 Both SNP 0034.scaffold00131 522304 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 522390 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 522402 1 C G scaffold9867 ScafM SNP 0034.scaffold00131 522404 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 522411 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 522415 1 A G scaffold9867 ScafM SNP 0034.scaffold00131 522423 1 G A scaffold9867 ScafM SNP 0034.scaffold00131 522435 1 A C scaffold9867 ScafM SNP 0034.scaffold00131 522440 1 T C scaffold9867 ScafM SNP 0034.scaffold00131 522448 1 C A scaffold9867 ScafM SNP 0034.scaffold00131 522460 1 G C scaffold9867 ReadM SNP 0034.scaffold00131 523580 1 C G - ReadM SNP 0034.scaffold00131 523619 1 G C - ReadM SNP 0034.scaffold00131 523747 1 G A - ReadM SNP 0034.scaffold00131 524084 1 C T - ReadM SNP 0034.scaffold00131 524103 1 G T - ScafM INDEL 0034.scaffold00131 524752 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 524764 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 524793 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 524911 2 TG CA scaffold5628 ScafM SNP 0034.scaffold00131 524919 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 524925 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 524937 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 524958 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 524969 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 524995 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 525014 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 525041 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 525050 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 525074 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 525076 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 525078 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 525106 1 T C scaffold5628 ReadM SNP 0034.scaffold00131 525433 1 A G - ReadM SNP 0034.scaffold00131 525747 1 C G - ReadM SNP 0034.scaffold00131 525834 1 A G - ReadM SNP 0034.scaffold00131 525960 1 C T - ReadM SNP 0034.scaffold00131 526030 1 A C - ReadM SNP 0034.scaffold00131 526175 1 C T - ReadM INDEL 0034.scaffold00131 526183 1 T . - ReadM SNP 0034.scaffold00131 526426 1 G T - ReadM SNP 0034.scaffold00131 526468 1 G A - ReadM INDEL 0034.scaffold00131 526567 1 . A - ReadM SNP 0034.scaffold00131 526602 1 T G - ReadM SNP 0034.scaffold00131 527220 1 T C - ReadM SNP 0034.scaffold00131 527475 1 C G - ReadM SNP 0034.scaffold00131 527493 1 C T - ScafM SNP 0034.scaffold00131 533585 2 AT GC scaffold5628 ScafM SNP 0034.scaffold00131 533601 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 533611 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 533622 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 533645 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 533737 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 533751 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 533767 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 533787 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 533792 6 ...... TATTAA scaffold5628 ScafM SNP 0034.scaffold00131 533854 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 533858 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 533869 2 CA TG scaffold5628 ScafM SNP 0034.scaffold00131 533873 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 533928 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 533948 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 533966 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 533975 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 533989 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 534044 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 534069 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 534153 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 534158 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 534184 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 534191 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 534224 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 534972 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 534974 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 534977 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 535012 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 535072 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 535095 2 AC .G scaffold5628 ScafM SNP 0034.scaffold00131 535114 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 535117 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 535137 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 535257 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 535294 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 535299 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 535326 1 G T scaffold5628 ScafM INDEL 0034.scaffold00131 535343 4 .... AAGA scaffold5628 ScafM SNP 0034.scaffold00131 536315 2 AA CG scaffold3119 ScafM INDEL 0034.scaffold00131 536324 1 A . scaffold3119 ScafM INDEL 0034.scaffold00131 536337 2 AT .. scaffold3119 ScafM INDEL 0034.scaffold00131 536347 3 CTC .AA scaffold3119 ScafM SNP 0034.scaffold00131 536374 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 536418 1 A G scaffold3119 ScafM INDEL 0034.scaffold00131 536420 2 .T AA scaffold3119 ReadM SNP 0034.scaffold00131 538086 1 C T - ReadM SNP 0034.scaffold00131 538221 1 C T - ReadM SNP 0034.scaffold00131 538228 1 G C - ScafM INDEL 0034.scaffold00131 539896 17 ................. GGTCCACCCAATGAAGA scaffold5628 ScafM INDEL 0034.scaffold00131 539898 2 .. GT scaffold5628 ScafM INDEL 0034.scaffold00131 539899 4 .... GGGC scaffold5628 ScafM INDEL 0034.scaffold00131 539901 1 . G scaffold5628 ScafM SNP 0034.scaffold00131 539915 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 539953 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 539981 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 539997 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 540004 1 C G scaffold5628 ScafM INDEL 0034.scaffold00131 540033 3 ... CGA scaffold5628 ScafM INDEL 0034.scaffold00131 540035 6 ...... GGAGAA scaffold5628 ScafM SNP 0034.scaffold00131 540115 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 540128 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 540143 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 540146 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 540179 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 540181 1 T G scaffold5628 ScafM INDEL 0034.scaffold00131 540183 8 ........ ATAATAAT scaffold5628 ScafM SNP 0034.scaffold00131 540191 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 540205 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 540237 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 542163 1 C T scaffold5628 ScafM INDEL 0034.scaffold00131 542178 2 .. AT scaffold5628 ScafM SNP 0034.scaffold00131 542225 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 542228 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 542246 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 542257 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 542320 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 542323 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 542336 3 GGA CTT scaffold5628 ScafM INDEL 0034.scaffold00131 542339 1 . A scaffold5628 ScafM SNP 0034.scaffold00131 542342 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 542344 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 542348 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 542360 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 542366 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 542368 2 GC AA scaffold5628 ScafM SNP 0034.scaffold00131 542372 3 CTC AGT scaffold5628 ScafM SNP 0034.scaffold00131 542562 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 542593 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 542632 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 542634 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 542644 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 542719 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 542743 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 542745 1 A T scaffold5628 Both SNP 0034.scaffold00131 542777 1 G A scaffold5628 Both SNP 0034.scaffold00131 542790 1 G C scaffold5628 Both SNP 0034.scaffold00131 542886 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 542911 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 542934 2 GT AG scaffold5628 ScafM SNP 0034.scaffold00131 542979 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 542995 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 542998 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 543009 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 543231 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 543253 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 543257 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 543267 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 543269 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 543278 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 543314 1 C T scaffold5628 ReadM SNP 0034.scaffold00131 543614 1 G A - ReadM SNP 0034.scaffold00131 543780 1 A T - ReadM SNP 0034.scaffold00131 543805 1 A G - ReadM SNP 0034.scaffold00131 544074 1 G A - ReadM INDEL 0034.scaffold00131 544119 1 . A - ReadM SNP 0034.scaffold00131 544181 1 C T - ReadM INDEL 0034.scaffold00131 544195 2 .. AA - ReadM SNP 0034.scaffold00131 544315 1 A G - ReadM SNP 0034.scaffold00131 544372 1 G A - ReadM SNP 0034.scaffold00131 544600 1 T C - ReadM SNP 0034.scaffold00131 544653 1 C G - Both SNP 0034.scaffold00131 544659 1 C G scaffold5628 Both INDEL 0034.scaffold00131 544690 1 . A scaffold5628 Both SNP 0034.scaffold00131 544701 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 544792 2 CT AA scaffold5628 ScafM INDEL 0034.scaffold00131 544801 12 CCCCCCCCAGCT ............ scaffold5628 ScafM INDEL 0034.scaffold00131 544828 3 ... CAG scaffold5628 ScafM SNP 0034.scaffold00131 544839 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 544848 1 C T scaffold5628 ReadM SNP 0034.scaffold00131 545052 1 C T - ReadM SNP 0034.scaffold00131 545165 1 A G - ReadM SNP 0034.scaffold00131 545202 1 C T - ReadM SNP 0034.scaffold00131 545204 1 G A - ReadM SNP 0034.scaffold00131 545431 1 T A - ReadM SNP 0034.scaffold00131 545459 1 G T - ReadM SNP 0034.scaffold00131 545524 1 C G - ReadM SNP 0034.scaffold00131 545536 1 A G - ReadM SNP 0034.scaffold00131 545567 1 T C - ScafM SNP 0034.scaffold00131 546727 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 546729 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 546731 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 546778 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 546804 1 A T scaffold5628 ScafM INDEL 0034.scaffold00131 546825 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 546833 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 549142 3 ATG TCA scaffold3119 ScafM SNP 0034.scaffold00131 549156 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 549194 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 549220 1 T A scaffold3119 ScafM SNP 0034.scaffold00131 549231 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 549305 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 549345 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 549363 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 549399 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 549463 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 549485 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 549489 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 549500 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 549536 1 C G scaffold3119 ScafM SNP 0034.scaffold00131 549562 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 549623 1 T A scaffold3119 ScafM INDEL 0034.scaffold00131 549625 1 . C scaffold3119 ScafM SNP 0034.scaffold00131 549629 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 549640 2 TA CC scaffold3119 ScafM SNP 0034.scaffold00131 549661 1 T C scaffold3119 ScafM SNP 0034.scaffold00131 549669 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 549677 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 549680 1 A T scaffold3119 ScafM INDEL 0034.scaffold00131 549683 2 TT .C scaffold3119 ScafM SNP 0034.scaffold00131 549691 2 CG TA scaffold3119 ScafM SNP 0034.scaffold00131 549697 1 G A scaffold3119 ScafM SNP 0034.scaffold00131 549761 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 549765 1 T G scaffold3119 ScafM SNP 0034.scaffold00131 549779 1 T G scaffold3119 ScafM SNP 0034.scaffold00131 549784 1 T C scaffold3119 ScafM INDEL 0034.scaffold00131 549790 2 .. TA scaffold3119 ScafM INDEL 0034.scaffold00131 549812 2 AA .. scaffold3119 ScafM SNP 0034.scaffold00131 549820 1 G T scaffold3119 ScafM SNP 0034.scaffold00131 549828 2 AC TT scaffold3119 ScafM SNP 0034.scaffold00131 549848 1 A T scaffold3119 ScafM SNP 0034.scaffold00131 549869 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 549876 1 T G scaffold3119 ScafM SNP 0034.scaffold00131 549905 1 A G scaffold3119 ScafM SNP 0034.scaffold00131 549909 1 C T scaffold3119 ScafM SNP 0034.scaffold00131 550142 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 550181 1 A C scaffold5628 ScafM INDEL 0034.scaffold00131 550236 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 550275 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 550278 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 550327 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 550356 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550358 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 550368 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 550379 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 550391 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550435 1 A T scaffold5628 ScafM INDEL 0034.scaffold00131 550455 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 550467 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550474 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 550487 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 550498 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 550551 1 C . scaffold5628 ScafM SNP 0034.scaffold00131 550554 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550599 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550672 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 550676 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 550752 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 550777 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 550896 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 550909 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 550927 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 550930 2 CC .T scaffold5628 ScafM INDEL 0034.scaffold00131 550945 2 .G AT scaffold5628 ScafM INDEL 0034.scaffold00131 550947 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 550968 2 TC AT scaffold5628 ScafM SNP 0034.scaffold00131 550973 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 550983 1 G A scaffold5628 ScafM INDEL 0034.scaffold00131 551011 1 . T scaffold5628 ScafM SNP 0034.scaffold00131 551013 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 551017 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 551019 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 551209 2 CT TG scaffold5628 ScafM SNP 0034.scaffold00131 551231 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551233 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 551239 2 CC GA scaffold5628 ScafM SNP 0034.scaffold00131 551243 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551252 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 551302 1 A G scaffold5628 ScafM SNP 0034.scaffold00131 551308 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 551311 1 C A scaffold5628 ScafM INDEL 0034.scaffold00131 551333 7 CCACTCC ......G scaffold5628 ScafM SNP 0034.scaffold00131 551353 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551355 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551359 2 CG TT scaffold5628 ScafM SNP 0034.scaffold00131 551368 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 551519 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 551542 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 551547 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 551564 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 551569 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 551572 1 C G scaffold5628 ScafM SNP 0034.scaffold00131 551584 1 G C scaffold5628 ScafM INDEL 0034.scaffold00131 551594 1 A . scaffold5628 ScafM SNP 0034.scaffold00131 551598 1 A G scaffold5628 ScafM INDEL 0034.scaffold00131 551619 2 AC .. scaffold5628 ScafM SNP 0034.scaffold00131 551624 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551782 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 551784 1 G C scaffold5628 ScafM SNP 0034.scaffold00131 551798 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 551800 1 G T scaffold5628 ScafM SNP 0034.scaffold00131 551821 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 551824 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551855 1 T A scaffold5628 ScafM SNP 0034.scaffold00131 551909 1 C A scaffold5628 ScafM SNP 0034.scaffold00131 551912 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 551919 2 TT CG scaffold5628 ScafM SNP 0034.scaffold00131 551924 1 T C scaffold5628 ScafM SNP 0034.scaffold00131 551928 1 A C scaffold5628 ScafM SNP 0034.scaffold00131 551942 1 A T scaffold5628 ScafM SNP 0034.scaffold00131 551960 1 G A scaffold5628 ScafM SNP 0034.scaffold00131 551970 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 551974 1 T G scaffold5628 ScafM SNP 0034.scaffold00131 551980 3 TCC GGT scaffold5628 ScafM SNP 0034.scaffold00131 551990 1 C T scaffold5628 ScafM SNP 0034.scaffold00131 555577 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 555580 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 555582 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 555609 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 555611 1 . T scaffold3021 ScafM SNP 0034.scaffold00131 555613 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 555623 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 555654 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 558694 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 558702 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 558707 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558721 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558738 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 558753 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 558779 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558782 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558784 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 558790 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558794 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 558797 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558807 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 558812 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 558825 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558843 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558869 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558899 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558901 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 558906 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 558912 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558932 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558935 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 558943 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 558953 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558958 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 558975 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 558979 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 559010 1 A T scaffold3021 ScafM INDEL 0034.scaffold00131 559015 1 C . scaffold3021 ScafM SNP 0034.scaffold00131 559017 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 559024 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 559033 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 559046 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 559091 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 559101 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 559111 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 560525 1 C A scaffold3021 ScafM INDEL 0034.scaffold00131 560534 1 C . scaffold3021 ScafM SNP 0034.scaffold00131 560540 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 560549 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 560573 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 560575 2 AT CC scaffold3021 ScafM SNP 0034.scaffold00131 560578 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560599 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 560603 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 560621 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 560627 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 560633 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560653 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 560659 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 560664 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 560671 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 560676 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560683 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 560694 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560705 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 560709 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 560713 2 GA TG scaffold3021 ScafM SNP 0034.scaffold00131 560724 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560737 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 560748 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 560754 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 560764 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 560792 1 A C scaffold3021 ScafM INDEL 0034.scaffold00131 560830 4 GCCC ..AT scaffold3021 ScafM SNP 0034.scaffold00131 560839 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560885 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560921 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560925 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 560953 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 560985 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 560999 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 561011 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561014 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 561016 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 561033 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 561052 2 .T AC scaffold3021 ScafM SNP 0034.scaffold00131 561055 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 561058 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 561060 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561066 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 561072 2 .. TG scaffold3021 ScafM INDEL 0034.scaffold00131 561079 1 . T scaffold3021 ScafM SNP 0034.scaffold00131 561100 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 561116 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 561125 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 561134 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 561156 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 561173 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561182 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 561191 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561209 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 561214 2 TC CG scaffold3021 ScafM INDEL 0034.scaffold00131 561243 5 TCTTC .GGGA scaffold3021 ScafM INDEL 0034.scaffold00131 561250 1 G . scaffold3021 ScafM SNP 0034.scaffold00131 561258 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 561263 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561273 2 AC CT scaffold3021 ScafM SNP 0034.scaffold00131 561283 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 561286 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 561295 1 G C scaffold3021 ScafM INDEL 0034.scaffold00131 561323 1 . C scaffold3021 ScafM SNP 0034.scaffold00131 561337 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 561347 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 561349 2 CC AT scaffold3021 ScafM SNP 0034.scaffold00131 561360 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 561362 2 TT AA scaffold3021 ScafM SNP 0034.scaffold00131 581676 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 581682 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 581685 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 581694 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 581696 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 581701 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 581713 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 581715 2 TG .. scaffold3021 ScafM SNP 0034.scaffold00131 581718 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 581728 2 CA TG scaffold3021 ScafM SNP 0034.scaffold00131 581731 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 581738 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 581755 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 581768 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 581786 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 581788 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 581832 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 581876 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 581879 2 TG .. scaffold3021 ScafM SNP 0034.scaffold00131 581890 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 581907 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 581912 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 581919 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 581947 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 581949 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 581962 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 581972 1 A G scaffold3021 ScafM INDEL 0034.scaffold00131 581990 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 581994 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 582014 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 582043 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 582063 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 582079 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 582085 1 A . scaffold3021 ScafM SNP 0034.scaffold00131 582089 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 582112 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 582121 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 582127 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 582130 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 584809 4 ATCG .... scaffold4924 ScafM SNP 0034.scaffold00131 584830 1 T A scaffold4924 ScafM SNP 0034.scaffold00131 586283 1 T C scaffold8721 ScafM SNP 0034.scaffold00131 586304 1 G A scaffold8721 ScafM SNP 0034.scaffold00131 586324 1 T C scaffold8721 ScafM SNP 0034.scaffold00131 586330 1 A T scaffold8721 ScafM SNP 0034.scaffold00131 586384 1 T C scaffold8721 ScafM SNP 0034.scaffold00131 586410 1 G A scaffold8721 ScafM SNP 0034.scaffold00131 589998 1 C A scaffold4924 ScafM SNP 0034.scaffold00131 590088 1 T C scaffold4924 ScafM SNP 0034.scaffold00131 590102 1 A G scaffold4924 ScafM SNP 0034.scaffold00131 590120 1 T C scaffold4924 ScafM SNP 0034.scaffold00131 590123 1 A G scaffold4924 ScafM SNP 0034.scaffold00131 590167 1 A G scaffold4924 ReadM SNP 0034.scaffold00131 594238 1 C T - ScafM SNP 0034.scaffold00131 615690 1 T C scaffold552 ScafM SNP 0034.scaffold00131 615692 1 A G scaffold552 ScafM SNP 0034.scaffold00131 615694 1 T A scaffold552 ScafM SNP 0034.scaffold00131 615708 1 A C scaffold552 ScafM SNP 0034.scaffold00131 615713 1 A C scaffold552 ScafM SNP 0034.scaffold00131 615737 1 T A scaffold552 ScafM SNP 0034.scaffold00131 615740 1 T G scaffold552 ScafM SNP 0034.scaffold00131 615752 1 A T scaffold552 ScafM SNP 0034.scaffold00131 615759 1 C T scaffold552 ScafM SNP 0034.scaffold00131 615763 1 C T scaffold552 ScafM SNP 0034.scaffold00131 615782 1 A G scaffold552 ScafM SNP 0034.scaffold00131 615786 1 A G scaffold552 ScafM SNP 0034.scaffold00131 615788 1 A G scaffold552 ScafM SNP 0034.scaffold00131 615801 1 T C scaffold552 ScafM SNP 0034.scaffold00131 615803 1 C T scaffold552 ScafM SNP 0034.scaffold00131 615806 2 AG TC scaffold552 ScafM SNP 0034.scaffold00131 615809 1 G A scaffold552 ScafM SNP 0034.scaffold00131 615818 1 G A scaffold552 ScafM SNP 0034.scaffold00131 615828 1 G A scaffold552 ScafM SNP 0034.scaffold00131 615839 1 T A scaffold552 ScafM SNP 0034.scaffold00131 617194 1 G A scaffold2831 ScafM SNP 0034.scaffold00131 617206 1 A G scaffold2831 ScafM SNP 0034.scaffold00131 617228 1 G T scaffold2831 ScafM INDEL 0034.scaffold00131 617258 1 . A scaffold2831 ScafM SNP 0034.scaffold00131 617282 1 A G scaffold2831 ScafM SNP 0034.scaffold00131 617289 1 C T scaffold2831 ScafM SNP 0034.scaffold00131 617295 1 G A scaffold2831 ScafM SNP 0034.scaffold00131 617307 1 G A scaffold2831 ScafM SNP 0034.scaffold00131 617327 1 T A scaffold2831 ScafM SNP 0034.scaffold00131 617359 1 T G scaffold2831 ScafM SNP 0034.scaffold00131 617367 1 A G scaffold2831 ScafM SNP 0034.scaffold00131 617372 1 T C scaffold2831 ReadM SNP 0034.scaffold00131 623181 1 T A - ScafM SNP 0034.scaffold00131 623951 1 C T scaffold313 ScafM INDEL 0034.scaffold00131 623993 1 G . scaffold313 ScafM SNP 0034.scaffold00131 624034 1 C G scaffold313 ScafM SNP 0034.scaffold00131 624037 1 A C scaffold313 ScafM INDEL 0034.scaffold00131 624039 1 G . scaffold313 ScafM SNP 0034.scaffold00131 624056 1 G C scaffold313 ScafM SNP 0034.scaffold00131 624068 1 G C scaffold313 ScafM SNP 0034.scaffold00131 624079 1 G C scaffold313 ScafM SNP 0034.scaffold00131 624082 1 A C scaffold313 ScafM SNP 0034.scaffold00131 624102 1 C A scaffold313 ScafM SNP 0034.scaffold00131 624112 1 C T scaffold313 ScafM SNP 0034.scaffold00131 624121 1 T C scaffold313 ScafM SNP 0034.scaffold00131 624173 1 A G scaffold313 ScafM INDEL 0034.scaffold00131 624187 17 ................. TTAGGATTCTTAGGAAC scaffold313 ScafM INDEL 0034.scaffold00131 624223 5 ..... TTTAG scaffold313 ScafM SNP 0034.scaffold00131 632217 1 G T scaffold13647 ScafM SNP 0034.scaffold00131 632219 1 T C scaffold13647 ScafM SNP 0034.scaffold00131 632221 1 G A scaffold13647 ScafM SNP 0034.scaffold00131 632225 2 AA TT scaffold13647 ScafM SNP 0034.scaffold00131 632230 1 T C scaffold13647 ScafM SNP 0034.scaffold00131 632241 1 C A scaffold13647 ScafM SNP 0034.scaffold00131 632244 1 G A scaffold13647 ScafM INDEL 0034.scaffold00131 632265 1 C . scaffold13647 ScafM SNP 0034.scaffold00131 632270 1 A G scaffold13647 ScafM SNP 0034.scaffold00131 632274 1 G T scaffold13647 ScafM SNP 0034.scaffold00131 632276 2 TG CA scaffold13647 ScafM SNP 0034.scaffold00131 632283 1 T C scaffold13647 ScafM SNP 0034.scaffold00131 632293 1 C T scaffold13647 ScafM SNP 0034.scaffold00131 632297 1 A G scaffold13647 ScafM SNP 0034.scaffold00131 632299 1 C A scaffold13647 ScafM SNP 0034.scaffold00131 632310 1 C T scaffold13647 ScafM SNP 0034.scaffold00131 632321 1 T C scaffold13647 ScafM SNP 0034.scaffold00131 632323 1 C T scaffold13647 ScafM SNP 0034.scaffold00131 632325 1 C T scaffold13647 ScafM SNP 0034.scaffold00131 632348 1 T A scaffold13647 ScafM SNP 0034.scaffold00131 632379 2 GC AT scaffold13647 ScafM SNP 0034.scaffold00131 632385 1 G A scaffold13647 ScafM INDEL 0034.scaffold00131 632387 1 . A scaffold13647 ScafM SNP 0034.scaffold00131 634048 3 CAA GGG scaffold12208 ScafM SNP 0034.scaffold00131 634054 1 T G scaffold12208 ScafM SNP 0034.scaffold00131 634082 1 T C scaffold12208 ScafM SNP 0034.scaffold00131 634085 2 TA CC scaffold12208 ScafM SNP 0034.scaffold00131 634089 1 A G scaffold12208 ScafM SNP 0034.scaffold00131 634094 1 C T scaffold12208 ScafM SNP 0034.scaffold00131 634099 1 G A scaffold12208 ScafM SNP 0034.scaffold00131 634147 1 A T scaffold12208 ScafM INDEL 0034.scaffold00131 634168 1 . T scaffold12208 ScafM SNP 0034.scaffold00131 634198 1 T G scaffold12208 ScafM SNP 0034.scaffold00131 634214 1 C T scaffold12208 ScafM INDEL 0034.scaffold00131 634223 4 .... CTAG scaffold12208 ScafM SNP 0034.scaffold00131 634234 1 T C scaffold12208 ScafM SNP 0034.scaffold00131 634271 1 A G scaffold12208 ScafM SNP 0034.scaffold00131 634280 1 T G scaffold12208 ScafM SNP 0034.scaffold00131 634283 1 A G scaffold12208 ScafM SNP 0034.scaffold00131 636197 1 A G scaffold7580 ScafM SNP 0034.scaffold00131 636218 3 TTT GGA scaffold7580 ScafM INDEL 0034.scaffold00131 636224 1 . G scaffold7580 ScafM SNP 0034.scaffold00131 636289 1 C A scaffold7580 ScafM SNP 0034.scaffold00131 636303 1 T C scaffold7580 ScafM SNP 0034.scaffold00131 636336 1 A C scaffold7580 ScafM SNP 0034.scaffold00131 636398 1 T G scaffold7580 ScafM SNP 0034.scaffold00131 636453 1 C A scaffold7580 ScafM INDEL 0034.scaffold00131 636514 1 A . scaffold7580 ScafM SNP 0034.scaffold00131 636541 1 G A scaffold7580 ScafM SNP 0034.scaffold00131 636543 1 C T scaffold7580 ScafM SNP 0034.scaffold00131 636550 1 A T scaffold7580 ScafM INDEL 0034.scaffold00131 636558 3 GAG ... scaffold7580 ScafM SNP 0034.scaffold00131 636569 1 C T scaffold7580 ScafM INDEL 0034.scaffold00131 636579 2 .. GG scaffold7580 ScafM SNP 0034.scaffold00131 636588 1 G A scaffold7580 ScafM INDEL 0034.scaffold00131 636622 2 CG .A scaffold7580 ScafM SNP 0034.scaffold00131 636626 1 A G scaffold7580 ScafM SNP 0034.scaffold00131 636642 1 T C scaffold7580 ScafM SNP 0034.scaffold00131 636652 1 C T scaffold7580 ScafM SNP 0034.scaffold00131 636658 1 A G scaffold7580 ScafM SNP 0034.scaffold00131 636676 1 T C scaffold7580 ScafM SNP 0034.scaffold00131 636683 1 C A scaffold7580 ScafM SNP 0034.scaffold00131 636697 1 T A scaffold7580 ScafM SNP 0034.scaffold00131 636706 1 A C scaffold7580 ScafM SNP 0034.scaffold00131 636710 1 G T scaffold7580 ScafM SNP 0034.scaffold00131 636730 1 G A scaffold7580 ScafM SNP 0034.scaffold00131 636743 1 T A scaffold7580 ScafM INDEL 0034.scaffold00131 636764 10 .......... GAAAAAAAAA scaffold7580 ScafM SNP 0034.scaffold00131 636804 1 C G scaffold7580 ScafM INDEL 0034.scaffold00131 636831 1 T . scaffold7580 ScafM INDEL 0034.scaffold00131 636843 6 TTTGCC ...... scaffold7580 ScafM INDEL 0034.scaffold00131 636853 8 TCGAATTG ........ scaffold7580 ScafM INDEL 0034.scaffold00131 636863 3 GTT ... scaffold7580 ScafM INDEL 0034.scaffold00131 636867 2 AT .. scaffold7580 ScafM INDEL 0034.scaffold00131 636914 1 T . scaffold7580 ScafM SNP 0034.scaffold00131 636916 1 T C scaffold7580 ScafM SNP 0034.scaffold00131 636961 1 A C scaffold7580 ScafM INDEL 0034.scaffold00131 636979 12 ............ GAAGAATCCGAC scaffold7580 ScafM SNP 0034.scaffold00131 636992 1 G T scaffold7580 ScafM SNP 0034.scaffold00131 636998 1 C T scaffold7580 ScafM SNP 0034.scaffold00131 637003 1 G A scaffold7580 ScafM SNP 0034.scaffold00131 637011 1 G A scaffold7580 ScafM SNP 0034.scaffold00131 637014 1 A T scaffold7580 ScafM SNP 0034.scaffold00131 637018 1 T G scaffold7580 ScafM SNP 0034.scaffold00131 637026 1 T C scaffold7580 ScafM SNP 0034.scaffold00131 637028 1 G A scaffold7580 ScafM SNP 0034.scaffold00131 637038 1 T A scaffold7580 ScafM SNP 0034.scaffold00131 637042 1 T G scaffold7580 ScafM SNP 0034.scaffold00131 637051 1 A G scaffold7580 ScafM SNP 0034.scaffold00131 637054 1 G C scaffold7580 ScafM INDEL 0034.scaffold00131 637058 2 AT .. scaffold7580 ScafM SNP 0034.scaffold00131 637245 1 A G scaffold7580 ReadM SNP 0034.scaffold00131 637317 1 C G - ScafM SNP 0034.scaffold00131 653108 1 C T scaffold6612 ScafM INDEL 0034.scaffold00131 653158 3 TCG ... scaffold6612 ScafM SNP 0034.scaffold00131 653162 1 G T scaffold6612 ScafM INDEL 0034.scaffold00131 653174 1 A . scaffold6612 ScafM INDEL 0034.scaffold00131 653243 1 . C scaffold6612 ScafM INDEL 0034.scaffold00131 653270 2 TT .A scaffold6612 ScafM SNP 0034.scaffold00131 653283 1 A G scaffold6612 ScafM SNP 0034.scaffold00131 653469 1 G C scaffold7069 ScafM INDEL 0034.scaffold00131 653744 2 .. CC scaffold6612 ScafM SNP 0034.scaffold00131 653750 1 A C scaffold6612 ScafM SNP 0034.scaffold00131 653762 1 T G scaffold6612 ScafM SNP 0034.scaffold00131 653786 1 A T scaffold6612 ScafM SNP 0034.scaffold00131 653833 1 A C scaffold6612 ScafM SNP 0034.scaffold00131 653865 1 G A scaffold6612 ScafM INDEL 0034.scaffold00131 663090 3 ... TAA scaffold21415 ScafM INDEL 0034.scaffold00131 663102 1 . G scaffold21415 ScafM SNP 0034.scaffold00131 663139 1 G A scaffold21415 ScafM SNP 0034.scaffold00131 663163 1 C T scaffold21415 ScafM SNP 0034.scaffold00131 663184 1 C A scaffold21415 ScafM INDEL 0034.scaffold00131 663253 4 ATTA .... scaffold21415 ScafM SNP 0034.scaffold00131 663273 1 G A scaffold21415 ScafM SNP 0034.scaffold00131 665126 1 C T scaffold21415 ScafM SNP 0034.scaffold00131 665132 1 C T scaffold21415 ScafM INDEL 0034.scaffold00131 665144 1 . G scaffold21415 ScafM SNP 0034.scaffold00131 665149 1 T C scaffold21415 ScafM SNP 0034.scaffold00131 665237 1 G A scaffold21415 ScafM SNP 0034.scaffold00131 665291 1 C G scaffold21415 ScafM SNP 0034.scaffold00131 665382 1 T G scaffold21415 ScafM SNP 0034.scaffold00131 671736 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 671744 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 671749 2 TT AG scaffold3021 ScafM SNP 0034.scaffold00131 671753 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 671763 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 671769 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 671806 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 671818 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 671832 2 TC AT scaffold3021 ScafM SNP 0034.scaffold00131 671845 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 671998 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 672010 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 672020 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 672023 1 C G scaffold3021 Both SNP 0034.scaffold00131 672086 1 G C scaffold3021 Both SNP 0034.scaffold00131 672220 1 C A scaffold3021 Both SNP 0034.scaffold00131 672275 1 A T scaffold3021 Both INDEL 0034.scaffold00131 672317 1 A . scaffold3021 Both SNP 0034.scaffold00131 672490 1 G A scaffold3021 Both SNP 0034.scaffold00131 672496 1 G A scaffold3021 Both SNP 0034.scaffold00131 672586 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 672651 2 AC .. scaffold3021 ScafM SNP 0034.scaffold00131 672706 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 672713 1 A T scaffold3021 ScafM INDEL 0034.scaffold00131 672990 1 . T scaffold3021 ScafM SNP 0034.scaffold00131 674173 1 A G scaffold3021 ScafM INDEL 0034.scaffold00131 674179 1 C . scaffold3021 ScafM SNP 0034.scaffold00131 674195 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 674207 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 674220 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 674225 1 A G scaffold3021 ScafM INDEL 0034.scaffold00131 674264 3 TTC ... scaffold3021 ScafM SNP 0034.scaffold00131 674276 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 674288 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 674308 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 674366 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 674381 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 674426 1 C G scaffold3021 Both SNP 0034.scaffold00131 674484 1 T G scaffold3021 Both SNP 0034.scaffold00131 674508 1 C A scaffold3021 ScafM INDEL 0034.scaffold00131 674655 4 .... CGAT scaffold3021 ScafM SNP 0034.scaffold00131 674704 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 674729 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 674882 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 674904 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 674923 2 .. TT scaffold3021 ScafM SNP 0034.scaffold00131 674924 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 674931 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 674936 2 AT GC scaffold3021 ScafM INDEL 0034.scaffold00131 674942 3 AAC ... scaffold3021 ScafM INDEL 0034.scaffold00131 674955 6 GTTATG .....C scaffold3021 ScafM INDEL 0034.scaffold00131 674994 1 A . scaffold3021 ScafM INDEL 0034.scaffold00131 674996 1 C . scaffold3021 ScafM SNP 0034.scaffold00131 674999 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 675020 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675025 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675030 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 675170 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675180 2 CC TT scaffold3021 ScafM SNP 0034.scaffold00131 675192 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675208 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 675213 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 675218 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 675232 3 GCA TTG scaffold3021 ScafM SNP 0034.scaffold00131 675248 2 TC CT scaffold3021 ScafM SNP 0034.scaffold00131 675259 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 675276 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 675280 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675289 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 675295 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 675308 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 675314 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 675327 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 675334 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 675343 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 675348 1 . A scaffold3021 ScafM INDEL 0034.scaffold00131 675350 2 .A GC scaffold3021 ScafM INDEL 0034.scaffold00131 675357 3 AAG ... scaffold3021 ScafM SNP 0034.scaffold00131 675362 1 A G scaffold3021 ScafM INDEL 0034.scaffold00131 675372 3 ... AAA scaffold3021 ScafM SNP 0034.scaffold00131 675379 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 675381 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 675384 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 675391 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 675393 1 G C scaffold3021 ScafM INDEL 0034.scaffold00131 675396 2 .. TA scaffold3021 ScafM SNP 0034.scaffold00131 675402 2 TT GA scaffold3021 ScafM SNP 0034.scaffold00131 675406 2 CG GT scaffold3021 Both INDEL 0034.scaffold00131 675451 1 A . scaffold3021 ScafM SNP 0034.scaffold00131 675453 1 A G scaffold3021 Both SNP 0034.scaffold00131 675525 1 A G scaffold3021 Both SNP 0034.scaffold00131 675643 1 G C scaffold3021 Both SNP 0034.scaffold00131 675660 1 A T scaffold3021 Both SNP 0034.scaffold00131 675681 1 G A scaffold3021 Both SNP 0034.scaffold00131 675695 1 T A scaffold3021 Both SNP 0034.scaffold00131 675759 1 T C scaffold3021 Both SNP 0034.scaffold00131 675762 1 T A scaffold3021 Both SNP 0034.scaffold00131 675824 1 T C scaffold3021 Both SNP 0034.scaffold00131 675838 1 A G scaffold3021 Both SNP 0034.scaffold00131 675847 1 T A scaffold3021 Both SNP 0034.scaffold00131 675932 1 G T scaffold3021 Both SNP 0034.scaffold00131 675960 1 C A scaffold3021 Both SNP 0034.scaffold00131 675966 1 G T scaffold3021 Both INDEL 0034.scaffold00131 676001 1 . T scaffold3021 Both SNP 0034.scaffold00131 676070 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 676107 1 G T scaffold3021 ScafM INDEL 0034.scaffold00131 676111 6 CCCACC ...... scaffold3021 ScafM SNP 0034.scaffold00131 676129 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 676142 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 676174 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 676205 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 676247 1 A C scaffold3021 ScafM INDEL 0034.scaffold00131 676264 1 G . scaffold3021 ReadM SNP 0034.scaffold00131 676892 1 A G - ReadM SNP 0034.scaffold00131 676915 1 A C - ReadM SNP 0034.scaffold00131 676967 1 G T - ScafM SNP 0034.scaffold00131 677187 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 677254 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 677269 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 677280 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 677285 1 A G scaffold3021 Both SNP 0034.scaffold00131 677289 1 A G scaffold3021 ReadM INDEL 0034.scaffold00131 677401 1 G . - ReadM SNP 0034.scaffold00131 677406 1 A G - ReadM SNP 0034.scaffold00131 677782 1 C T - ReadM SNP 0034.scaffold00131 677857 1 C T - ReadM SNP 0034.scaffold00131 677934 1 A G - ReadM SNP 0034.scaffold00131 677949 1 A G - ReadM SNP 0034.scaffold00131 678034 1 G A - ReadM SNP 0034.scaffold00131 678299 1 G C - ReadM SNP 0034.scaffold00131 678371 1 C T - ReadM SNP 0034.scaffold00131 678401 1 T C - ReadM INDEL 0034.scaffold00131 678409 1 . C - ReadM SNP 0034.scaffold00131 678464 1 A T - ReadM SNP 0034.scaffold00131 678472 1 A T - ReadM SNP 0034.scaffold00131 678530 1 A C - ReadM SNP 0034.scaffold00131 678794 1 G C - ReadM SNP 0034.scaffold00131 678804 1 T C - ReadM SNP 0034.scaffold00131 678965 1 C T - ReadM INDEL 0034.scaffold00131 679266 1 T . - ReadM SNP 0034.scaffold00131 679277 1 C T - ReadM SNP 0034.scaffold00131 679375 1 C T - ReadM SNP 0034.scaffold00131 679448 1 A C - ReadM SNP 0034.scaffold00131 679839 1 A G - ReadM SNP 0034.scaffold00131 679854 1 G C - ReadM SNP 0034.scaffold00131 680775 1 A T - ReadM SNP 0034.scaffold00131 680802 1 A G - ReadM SNP 0034.scaffold00131 681042 1 G A - ReadM INDEL 0034.scaffold00131 681070 1 T . - ReadM SNP 0034.scaffold00131 681142 1 T G - ReadM SNP 0034.scaffold00131 683176 1 A G - ReadM SNP 0034.scaffold00131 683183 1 A G - ReadM SNP 0034.scaffold00131 683260 1 C A - ReadM SNP 0034.scaffold00131 683269 1 T C - ReadM SNP 0034.scaffold00131 683536 1 G T - ReadM SNP 0034.scaffold00131 683550 1 A G - ReadM SNP 0034.scaffold00131 683560 1 C A - ReadM SNP 0034.scaffold00131 683690 1 C T - ReadM SNP 0034.scaffold00131 683712 1 T A - ReadM SNP 0034.scaffold00131 683715 1 T C - ReadM SNP 0034.scaffold00131 683749 1 C T - ReadM SNP 0034.scaffold00131 683761 1 G A - ReadM SNP 0034.scaffold00131 683805 1 T C - ReadM SNP 0034.scaffold00131 683835 1 G A - ReadM SNP 0034.scaffold00131 683873 1 C A - ReadM SNP 0034.scaffold00131 683923 1 A G - ReadM SNP 0034.scaffold00131 683948 1 T C - ReadM SNP 0034.scaffold00131 683990 1 C T - ReadM SNP 0034.scaffold00131 684043 1 T C - ReadM SNP 0034.scaffold00131 684090 1 G A - ReadM SNP 0034.scaffold00131 684159 1 T C - ReadM SNP 0034.scaffold00131 684325 1 T A - ReadM SNP 0034.scaffold00131 684373 1 C T - ReadM SNP 0034.scaffold00131 684398 1 C T - ReadM SNP 0034.scaffold00131 684425 1 G A - ReadM SNP 0034.scaffold00131 684543 1 G A - ReadM SNP 0034.scaffold00131 684578 1 G T - ReadM SNP 0034.scaffold00131 684615 1 A G - ReadM INDEL 0034.scaffold00131 684677 1 C . - ReadM SNP 0034.scaffold00131 684779 1 G A - ReadM SNP 0034.scaffold00131 684801 1 T G - ReadM SNP 0034.scaffold00131 684811 1 A G - ReadM INDEL 0034.scaffold00131 684877 1 . G - ReadM SNP 0034.scaffold00131 684893 1 G T - ReadM SNP 0034.scaffold00131 684912 1 A T - ReadM SNP 0034.scaffold00131 685095 1 G T - ReadM SNP 0034.scaffold00131 685115 1 A G - ReadM SNP 0034.scaffold00131 685224 1 G C - ReadM SNP 0034.scaffold00131 685284 1 C G - ReadM SNP 0034.scaffold00131 685564 1 T C - ReadM SNP 0034.scaffold00131 685570 1 G A - ReadM SNP 0034.scaffold00131 685652 1 A G - ReadM SNP 0034.scaffold00131 685885 1 C T - ReadM SNP 0034.scaffold00131 685921 1 G C - ReadM SNP 0034.scaffold00131 685945 1 C T - ReadM SNP 0034.scaffold00131 685991 1 A G - ReadM SNP 0034.scaffold00131 686000 1 G A - ReadM SNP 0034.scaffold00131 686047 1 T C - ReadM SNP 0034.scaffold00131 686301 1 C G - ReadM SNP 0034.scaffold00131 686306 1 C T - ReadM SNP 0034.scaffold00131 686427 1 C T - ReadM SNP 0034.scaffold00131 686455 1 G A - ReadM SNP 0034.scaffold00131 686807 1 A G - ReadM SNP 0034.scaffold00131 686837 1 T G - ReadM SNP 0034.scaffold00131 687968 1 G T - ReadM SNP 0034.scaffold00131 688020 1 A G - ReadM SNP 0034.scaffold00131 688046 1 C G - ReadM INDEL 0034.scaffold00131 688110 1 A . - ReadM SNP 0034.scaffold00131 688123 1 A G - ReadM SNP 0034.scaffold00131 688950 1 C T - ReadM SNP 0034.scaffold00131 688990 1 T C - ReadM SNP 0034.scaffold00131 689485 1 G A - ReadM SNP 0034.scaffold00131 689515 1 C A - ReadM SNP 0034.scaffold00131 689531 1 T C - ReadM SNP 0034.scaffold00131 689621 1 A C - ReadM SNP 0034.scaffold00131 689727 1 T C - ReadM SNP 0034.scaffold00131 689740 1 A G - ReadM SNP 0034.scaffold00131 689774 1 A G - ReadM SNP 0034.scaffold00131 689885 1 C A - ReadM SNP 0034.scaffold00131 689910 1 G T - ReadM SNP 0034.scaffold00131 689995 1 A G - ReadM SNP 0034.scaffold00131 690055 1 A G - ReadM SNP 0034.scaffold00131 690162 1 G A - ReadM SNP 0034.scaffold00131 690165 1 C G - ReadM SNP 0034.scaffold00131 690183 1 C T - ReadM SNP 0034.scaffold00131 690302 1 T C - ReadM INDEL 0034.scaffold00131 690318 1 A . - ReadM SNP 0034.scaffold00131 690501 1 C A - ReadM SNP 0034.scaffold00131 690524 1 T A - ReadM SNP 0034.scaffold00131 690566 1 T G - ReadM SNP 0034.scaffold00131 690615 1 T C - ReadM SNP 0034.scaffold00131 690711 1 A G - ReadM SNP 0034.scaffold00131 690752 1 G T - ReadM SNP 0034.scaffold00131 692703 1 A G - ReadM SNP 0034.scaffold00131 692741 1 C T - ReadM SNP 0034.scaffold00131 692749 1 C T - ReadM SNP 0034.scaffold00131 692754 1 G A - ReadM INDEL 0034.scaffold00131 692887 1 C . - ReadM SNP 0034.scaffold00131 692978 1 T C - ReadM SNP 0034.scaffold00131 693158 1 A T - ReadM SNP 0034.scaffold00131 693205 1 C A - ReadM SNP 0034.scaffold00131 693251 1 A G - ReadM INDEL 0034.scaffold00131 693356 1 . A - ReadM SNP 0034.scaffold00131 693386 1 G A - Both SNP 0034.scaffold00131 693435 1 C T scaffold3021 Both SNP 0034.scaffold00131 693524 1 C T scaffold3021 Both SNP 0034.scaffold00131 693643 1 A G scaffold3021 Both SNP 0034.scaffold00131 693651 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 693760 2 CG TT scaffold3021 Both SNP 0034.scaffold00131 693790 1 A T scaffold3021 ReadM SNP 0034.scaffold00131 693818 1 T G - ReadM SNP 0034.scaffold00131 696092 1 C G - ReadM SNP 0034.scaffold00131 696138 1 A G - ReadM SNP 0034.scaffold00131 696630 1 A T - ReadM SNP 0034.scaffold00131 697089 1 G A - ReadM SNP 0034.scaffold00131 697115 1 A G - Both SNP 0034.scaffold00131 697422 1 T G scaffold3021 Both SNP 0034.scaffold00131 697433 1 C A scaffold3021 Both SNP 0034.scaffold00131 697519 1 C T scaffold3021 Both SNP 0034.scaffold00131 697529 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 697609 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 697618 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 697651 2 GT AC scaffold3021 ScafM SNP 0034.scaffold00131 697768 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 697771 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 697788 1 C T scaffold3021 Both SNP 0034.scaffold00131 697908 1 A G scaffold3021 Both SNP 0034.scaffold00131 697930 1 A G scaffold3021 Both SNP 0034.scaffold00131 697958 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 697992 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 698032 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 698059 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 698062 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 698083 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 698127 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 698139 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 698160 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 698203 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 698227 1 G T scaffold3021 ScafM INDEL 0034.scaffold00131 698229 1 . G scaffold3021 ScafM SNP 0034.scaffold00131 698252 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 698266 1 C G scaffold3021 ReadM SNP 0034.scaffold00131 712374 1 C T - ReadM SNP 0034.scaffold00131 712669 1 G C - ReadM SNP 0034.scaffold00131 712778 1 G A - ReadM SNP 0034.scaffold00131 712820 1 A G - ReadM SNP 0034.scaffold00131 721427 1 C T - ScafM INDEL 0034.scaffold00131 722252 2 GC .. scaffold21245 ScafM SNP 0034.scaffold00131 722265 1 T A scaffold21245 ScafM SNP 0034.scaffold00131 722289 1 T G scaffold21245 ScafM SNP 0034.scaffold00131 726118 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 726180 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 726260 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 726283 1 G T scaffold3021 ScafM INDEL 0034.scaffold00131 726458 3 TTC ... scaffold3021 ScafM SNP 0034.scaffold00131 726465 1 T C scaffold3021 Both SNP 0034.scaffold00131 726541 1 T A scaffold3021 Both SNP 0034.scaffold00131 726548 1 T A scaffold3021 Both SNP 0034.scaffold00131 726725 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 726756 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 726759 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 726767 1 C T scaffold3021 Both SNP 0034.scaffold00131 726816 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 726927 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 726933 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 726940 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 726956 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 726988 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 727008 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 727018 1 T G scaffold3021 Both SNP 0034.scaffold00131 727069 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 727075 1 G C scaffold3021 Both SNP 0034.scaffold00131 727115 1 G T scaffold3021 Both SNP 0034.scaffold00131 727124 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 727190 2 AT TA scaffold3021 Both SNP 0034.scaffold00131 727197 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 727248 1 T . scaffold3021 ScafM INDEL 0034.scaffold00131 727282 4 ACGT .... scaffold3021 ScafM SNP 0034.scaffold00131 727290 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 727300 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 727357 2 GC AA scaffold3021 Both SNP 0034.scaffold00131 727408 1 C T scaffold3021 Both SNP 0034.scaffold00131 727488 1 A G scaffold3021 Both SNP 0034.scaffold00131 727528 1 C T scaffold3021 Both SNP 0034.scaffold00131 727546 1 T C scaffold3021 Both SNP 0034.scaffold00131 727599 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 727631 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 727648 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 727651 1 T A scaffold3021 Both SNP 0034.scaffold00131 727673 1 C A scaffold3021 Both SNP 0034.scaffold00131 727723 1 A T scaffold3021 Both SNP 0034.scaffold00131 727746 1 T A scaffold3021 Both SNP 0034.scaffold00131 727779 1 G T scaffold3021 Both SNP 0034.scaffold00131 727787 1 T A scaffold3021 Both SNP 0034.scaffold00131 727863 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 727881 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 727885 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 727888 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 727893 1 G A scaffold3021 Both SNP 0034.scaffold00131 727905 1 C T scaffold3021 Both SNP 0034.scaffold00131 728019 1 C T scaffold3021 Both SNP 0034.scaffold00131 728061 1 A G scaffold3021 Both SNP 0034.scaffold00131 728146 1 T C scaffold3021 Both INDEL 0034.scaffold00131 728150 1 C . scaffold3021 Both SNP 0034.scaffold00131 728177 1 C A scaffold3021 Both SNP 0034.scaffold00131 728198 1 C T scaffold3021 ReadM SNP 0034.scaffold00131 728418 1 T G - ReadM INDEL 0034.scaffold00131 728436 1 A . - Both SNP 0034.scaffold00131 728555 1 G A scaffold3021 Both SNP 0034.scaffold00131 728575 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 728605 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 728633 9 ......... CCCCCAAAC scaffold3021 ScafM INDEL 0034.scaffold00131 728635 4 .... AAAA scaffold3021 ScafM SNP 0034.scaffold00131 728651 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 728686 2 GT AA scaffold3021 Both SNP 0034.scaffold00131 728727 1 C T scaffold3021 Both SNP 0034.scaffold00131 728760 1 C T scaffold3021 ReadM SNP 0034.scaffold00131 728818 1 A C - ReadM SNP 0034.scaffold00131 728852 1 T C - ReadM SNP 0034.scaffold00131 728867 1 G T - ReadM SNP 0034.scaffold00131 729158 1 G A - ReadM SNP 0034.scaffold00131 729165 1 T C - ReadM SNP 0034.scaffold00131 729180 1 G A - ReadM SNP 0034.scaffold00131 729666 1 C T - ReadM INDEL 0034.scaffold00131 738913 1 C . - ScafM INDEL 0034.scaffold00131 739784 67 ACCATATCAGAATTATGAAATTAAAGACACTAAAGTTTTTTTGGAAACTGAATTAAAATTATAGATC ................................................................... scaffold3021 ScafM SNP 0034.scaffold00131 739873 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 739965 2 CC AT scaffold3021 Both SNP 0034.scaffold00131 739995 1 C T scaffold3021 Both SNP 0034.scaffold00131 740072 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 740082 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 740087 1 A G scaffold3021 ScafM INDEL 0034.scaffold00131 740122 3 ... TGG scaffold3021 ScafM INDEL 0034.scaffold00131 740123 2 .. CC scaffold3021 ScafM SNP 0034.scaffold00131 740131 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 740176 2 GG AA scaffold3021 Both SNP 0034.scaffold00131 740214 1 G T scaffold3021 Both SNP 0034.scaffold00131 740229 1 A G scaffold3021 Both SNP 0034.scaffold00131 740284 1 G T scaffold3021 Both SNP 0034.scaffold00131 740300 1 A T scaffold3021 Both INDEL 0034.scaffold00131 740306 1 A . scaffold3021 Both SNP 0034.scaffold00131 740378 1 A G scaffold3021 Both SNP 0034.scaffold00131 740432 1 T A scaffold3021 Both SNP 0034.scaffold00131 740488 1 C A scaffold3021 Both SNP 0034.scaffold00131 740566 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 740582 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 740586 1 C A scaffold3021 Both SNP 0034.scaffold00131 740600 1 A G scaffold3021 Both SNP 0034.scaffold00131 740624 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 740667 1 A G scaffold3021 Both SNP 0034.scaffold00131 740722 1 C A scaffold3021 Both INDEL 0034.scaffold00131 740787 1 . T scaffold3021 Both SNP 0034.scaffold00131 740791 1 A G scaffold3021 Both SNP 0034.scaffold00131 740861 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 740904 1 T C scaffold3021 ReadM SNP 0034.scaffold00131 740973 1 A G - ReadM SNP 0034.scaffold00131 740982 1 C T - ReadM SNP 0034.scaffold00131 741156 1 A T - ReadM SNP 0034.scaffold00131 741185 1 A T - ScafM INDEL 0034.scaffold00131 741273 1 A . scaffold3021 ScafM SNP 0034.scaffold00131 741275 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 741282 1 . A scaffold3021 ScafM SNP 0034.scaffold00131 741303 1 T C scaffold3021 Both SNP 0034.scaffold00131 741374 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 741526 1 . A scaffold3021 Both SNP 0034.scaffold00131 741593 1 T C scaffold3021 Both SNP 0034.scaffold00131 741611 1 G A scaffold3021 Both SNP 0034.scaffold00131 741625 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 741825 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 741831 2 CG TA scaffold3021 ScafM SNP 0034.scaffold00131 741843 1 A T scaffold3021 ReadM INDEL 0034.scaffold00131 742035 1 C . - ReadM SNP 0034.scaffold00131 742115 1 T C - ReadM SNP 0034.scaffold00131 742146 1 A C - ScafM INDEL 0034.scaffold00131 742335 1 . T scaffold3021 ScafM INDEL 0034.scaffold00131 742430 2 TT .A scaffold3021 Both SNP 0034.scaffold00131 742461 1 C T scaffold3021 Both SNP 0034.scaffold00131 742475 1 G A scaffold3021 Both SNP 0034.scaffold00131 742625 1 A C scaffold3021 Both SNP 0034.scaffold00131 742699 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 742879 1 G A scaffold3021 ReadM SNP 0034.scaffold00131 743112 1 A G - Both SNP 0034.scaffold00131 743156 1 G T scaffold3021 Both SNP 0034.scaffold00131 743204 1 G A scaffold3021 Both SNP 0034.scaffold00131 743484 1 A T scaffold3021 Both SNP 0034.scaffold00131 743496 1 A G scaffold3021 Both SNP 0034.scaffold00131 743515 1 T G scaffold3021 Both SNP 0034.scaffold00131 743651 1 A T scaffold3021 Both SNP 0034.scaffold00131 743667 1 C T scaffold3021 Both SNP 0034.scaffold00131 743715 1 G A scaffold3021 Both SNP 0034.scaffold00131 743815 1 T C scaffold3021 ReadM SNP 0034.scaffold00131 743948 1 T A - ReadM SNP 0034.scaffold00131 743985 1 T C - ReadM SNP 0034.scaffold00131 744009 1 T C - ReadM SNP 0034.scaffold00131 744032 1 G C - ReadM SNP 0034.scaffold00131 744093 1 C G - ReadM SNP 0034.scaffold00131 744214 1 A G - Both SNP 0034.scaffold00131 744313 1 G C scaffold3021 Both SNP 0034.scaffold00131 744337 1 T A scaffold3021 Both SNP 0034.scaffold00131 744387 1 T C scaffold3021 Both SNP 0034.scaffold00131 744452 1 G T scaffold3021 Both SNP 0034.scaffold00131 744464 1 A C scaffold3021 Both SNP 0034.scaffold00131 744507 1 A G scaffold3021 Both SNP 0034.scaffold00131 744613 1 G A scaffold3021 Both SNP 0034.scaffold00131 744616 1 G A scaffold3021 Both SNP 0034.scaffold00131 744651 1 C T scaffold3021 Both SNP 0034.scaffold00131 744706 1 A T scaffold3021 Both SNP 0034.scaffold00131 744728 1 C A scaffold3021 Both SNP 0034.scaffold00131 744734 1 G T scaffold3021 Both SNP 0034.scaffold00131 744787 1 C T scaffold3021 Both SNP 0034.scaffold00131 744802 1 C T scaffold3021 Both SNP 0034.scaffold00131 744806 1 T A scaffold3021 Both SNP 0034.scaffold00131 744867 1 A G scaffold3021 Both SNP 0034.scaffold00131 744903 1 A T scaffold3021 Both SNP 0034.scaffold00131 744945 1 C A scaffold3021 Both SNP 0034.scaffold00131 745004 1 G A scaffold3021 Both SNP 0034.scaffold00131 745043 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 745056 1 T C scaffold3021 Both SNP 0034.scaffold00131 745078 1 T G scaffold3021 ScafM INDEL 0034.scaffold00131 745168 34 .................................. TAAGGGATTTCAGACTAGTTCTTTTACTGATATA scaffold3021 ScafM INDEL 0034.scaffold00131 745171 21 ..................... GAAGTATTGGTGTCTAGTTCG scaffold3021 ScafM INDEL 0034.scaffold00131 745174 1 . G scaffold3021 ScafM SNP 0034.scaffold00131 745213 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 745225 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 745241 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 745248 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 745266 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 745269 1 T C scaffold3021 Both SNP 0034.scaffold00131 745311 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 745340 1 A C scaffold3021 Both SNP 0034.scaffold00131 745427 1 G C scaffold3021 Both SNP 0034.scaffold00131 745464 1 G C scaffold3021 Both SNP 0034.scaffold00131 745470 1 C T scaffold3021 Both SNP 0034.scaffold00131 745492 1 A G scaffold3021 Both SNP 0034.scaffold00131 745505 1 G T scaffold3021 Both SNP 0034.scaffold00131 745591 1 G T scaffold3021 Both SNP 0034.scaffold00131 745612 1 C T scaffold3021 Both SNP 0034.scaffold00131 745616 1 A G scaffold3021 Both SNP 0034.scaffold00131 745662 1 G C scaffold3021 Both SNP 0034.scaffold00131 745800 1 G T scaffold3021 Both SNP 0034.scaffold00131 745808 1 A T scaffold3021 ScafM INDEL 0034.scaffold00131 745831 7 AATAATG ....... scaffold3021 ScafM SNP 0034.scaffold00131 745849 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 745872 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 745878 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 745931 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 745941 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 745961 1 . C scaffold3021 ScafM SNP 0034.scaffold00131 745965 1 G C scaffold3021 ScafM INDEL 0034.scaffold00131 745998 2 .. AA scaffold3021 ScafM INDEL 0034.scaffold00131 746005 3 TGT ... scaffold3021 ScafM SNP 0034.scaffold00131 746045 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 746050 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 746063 2 CT TC scaffold3021 ScafM SNP 0034.scaffold00131 746095 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 746116 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 746120 2 TC AT scaffold3021 ScafM SNP 0034.scaffold00131 746124 1 C G scaffold3021 Both SNP 0034.scaffold00131 746168 1 C T scaffold3021 Both SNP 0034.scaffold00131 746184 1 C T scaffold3021 ReadM SNP 0034.scaffold00131 746241 1 C T - ReadM SNP 0034.scaffold00131 746276 1 C T - ReadM SNP 0034.scaffold00131 746381 1 C T - ReadM SNP 0034.scaffold00131 746384 1 C T - Both SNP 0034.scaffold00131 746399 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 746450 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 746454 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 746457 2 GA AG scaffold3021 ScafM SNP 0034.scaffold00131 746472 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 746474 1 A T scaffold3021 Both SNP 0034.scaffold00131 746546 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 746575 1 T C scaffold3021 ReadM SNP 0034.scaffold00131 746679 1 C A - Both SNP 0034.scaffold00131 746701 1 C T scaffold3021 Both SNP 0034.scaffold00131 746729 1 T C scaffold3021 Both SNP 0034.scaffold00131 746760 1 T C scaffold3021 Both INDEL 0034.scaffold00131 746812 1 G . scaffold3021 Both SNP 0034.scaffold00131 746872 1 T C scaffold3021 Both SNP 0034.scaffold00131 746918 1 C G scaffold3021 ScafM INDEL 0034.scaffold00131 747034 2 TT .. scaffold3021 ScafM INDEL 0034.scaffold00131 747051 3 TCT ... scaffold3021 ReadM SNP 0034.scaffold00131 747171 1 G A - ReadM SNP 0034.scaffold00131 747198 1 A T - ReadM SNP 0034.scaffold00131 747326 1 T C - Both SNP 0034.scaffold00131 747391 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 747429 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 747499 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 747502 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 747525 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 747541 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 747574 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 747639 3 AAT TTA scaffold3021 ReadM INDEL 0034.scaffold00131 747772 1 T . - ReadM SNP 0034.scaffold00131 747857 1 A T - ReadM SNP 0034.scaffold00131 747886 1 C T - ReadM SNP 0034.scaffold00131 747924 1 A T - Both SNP 0034.scaffold00131 747968 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 748034 14 AATATACTTCCTCC .............. scaffold3021 Both SNP 0034.scaffold00131 748108 1 A G scaffold3021 Both SNP 0034.scaffold00131 748114 1 C G scaffold3021 ReadM SNP 0034.scaffold00131 748161 1 C T - ReadM SNP 0034.scaffold00131 748189 1 A T - Both INDEL 0034.scaffold00131 748284 3 TTG ... scaffold3021 Both SNP 0034.scaffold00131 748320 1 A G scaffold3021 Both SNP 0034.scaffold00131 748339 1 G A scaffold3021 Both SNP 0034.scaffold00131 748365 1 A T scaffold3021 Both SNP 0034.scaffold00131 748413 1 A G scaffold3021 Both SNP 0034.scaffold00131 748568 1 G C scaffold3021 Both SNP 0034.scaffold00131 748580 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 748629 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 748633 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 748647 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 748670 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 748677 2 GT CC scaffold3021 ScafM SNP 0034.scaffold00131 748692 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 748745 1 A G scaffold3021 Both SNP 0034.scaffold00131 748772 1 A G scaffold3021 Both SNP 0034.scaffold00131 748776 1 T G scaffold3021 Both INDEL 0034.scaffold00131 748810 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 748954 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 748958 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 749176 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 749178 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 749193 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 749203 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 749213 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 749234 2 AA GG scaffold3021 ScafM INDEL 0034.scaffold00131 749247 1 . G scaffold3021 ScafM SNP 0034.scaffold00131 749328 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 749332 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 749367 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 749370 1 T . scaffold3021 ScafM INDEL 0034.scaffold00131 749384 1 . G scaffold3021 ScafM SNP 0034.scaffold00131 749435 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 749454 3 ... CTC scaffold3021 ReadM SNP 0034.scaffold00131 749577 1 G A - ReadM SNP 0034.scaffold00131 749614 1 T C - ScafM SNP 0034.scaffold00131 749723 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 749765 3 ... AAT scaffold3021 ScafM SNP 0034.scaffold00131 749804 1 G A scaffold3021 Both SNP 0034.scaffold00131 749951 1 G C scaffold3021 Both SNP 0034.scaffold00131 749962 1 G T scaffold3021 Both SNP 0034.scaffold00131 750040 1 T C scaffold3021 ReadM SNP 0034.scaffold00131 750076 1 G A - ReadM SNP 0034.scaffold00131 750097 1 G A - ReadM SNP 0034.scaffold00131 750163 1 G T - ReadM SNP 0034.scaffold00131 750284 1 A G - ReadM SNP 0034.scaffold00131 750311 1 C T - Both SNP 0034.scaffold00131 750753 1 C T scaffold3021 Both SNP 0034.scaffold00131 750757 1 A T scaffold3021 Both SNP 0034.scaffold00131 750781 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 750896 24 ........................ ATTTAATATGGGTCTTTGATCTTT scaffold3021 Both SNP 0034.scaffold00131 750945 1 T G scaffold3021 Both SNP 0034.scaffold00131 750968 1 C A scaffold3021 Both SNP 0034.scaffold00131 751064 1 A G scaffold3021 Both INDEL 0034.scaffold00131 751106 2 GG .. scaffold3021 ScafM SNP 0034.scaffold00131 751129 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 751150 1 . T scaffold3021 ScafM SNP 0034.scaffold00131 751159 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 751165 1 G C scaffold3021 ScafM INDEL 0034.scaffold00131 751168 1 . T scaffold3021 Both INDEL 0034.scaffold00131 751194 2 AA .. scaffold3021 Both SNP 0034.scaffold00131 751307 1 G A scaffold3021 Both SNP 0034.scaffold00131 751317 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 751348 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 751350 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 751357 1 G T scaffold3021 Both SNP 0034.scaffold00131 751393 1 A T scaffold3021 Both SNP 0034.scaffold00131 751433 1 C T scaffold3021 Both SNP 0034.scaffold00131 751488 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 751537 3 CCT ... scaffold3021 ScafM INDEL 0034.scaffold00131 751559 1 . A scaffold3021 ScafM SNP 0034.scaffold00131 751561 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 751567 1 G T scaffold3021 Both SNP 0034.scaffold00131 751585 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 751638 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 751646 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 751686 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 751690 2 TT AA scaffold3021 ScafM SNP 0034.scaffold00131 751702 2 CC AT scaffold3021 ScafM INDEL 0034.scaffold00131 751737 4 .... TTTT scaffold3021 Both SNP 0034.scaffold00131 751757 1 G A scaffold3021 Both SNP 0034.scaffold00131 751786 1 C T scaffold3021 Both SNP 0034.scaffold00131 751818 1 T C scaffold3021 Both SNP 0034.scaffold00131 751847 1 C T scaffold3021 Both SNP 0034.scaffold00131 751883 1 T C scaffold3021 Both SNP 0034.scaffold00131 751960 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 751989 2 AC .. scaffold3021 ScafM SNP 0034.scaffold00131 751996 1 C T scaffold3021 Both SNP 0034.scaffold00131 752070 1 C T scaffold3021 Both SNP 0034.scaffold00131 752102 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 752120 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 752124 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 752138 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 752151 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 752167 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 752173 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 752182 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 752202 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 752205 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 752208 1 T G scaffold3021 ReadM SNP 0034.scaffold00131 752260 1 A G - ReadM INDEL 0034.scaffold00131 752278 1 A . - ScafM SNP 0034.scaffold00131 752467 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 752511 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 752525 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 752527 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 752529 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 752569 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 752579 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 752593 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 752605 1 A . scaffold3021 Both SNP 0034.scaffold00131 752707 1 G A scaffold3021 Both SNP 0034.scaffold00131 752760 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 752783 1 G . scaffold3021 ScafM SNP 0034.scaffold00131 752792 1 T A scaffold3021 ScafM SNP 0034.scaffold00131 752803 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 752821 1 T G scaffold3021 ScafM SNP 0034.scaffold00131 752850 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 752881 3 ... GAC scaffold3021 ScafM SNP 0034.scaffold00131 752917 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 753006 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 753034 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 753066 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 753079 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 753109 14 .............. AATCAGTATGATAT scaffold3021 Both SNP 0034.scaffold00131 753169 1 T G scaffold3021 Both INDEL 0034.scaffold00131 753183 1 . T scaffold3021 ScafM INDEL 0034.scaffold00131 753255 3 TGT ... scaffold3021 ScafM SNP 0034.scaffold00131 753280 1 C A scaffold3021 ScafM INDEL 0034.scaffold00131 753285 2 CT .A scaffold3021 ScafM INDEL 0034.scaffold00131 753289 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 753294 1 G A scaffold3021 Both SNP 0034.scaffold00131 753445 1 T C scaffold3021 Both SNP 0034.scaffold00131 753486 1 T G scaffold3021 Both SNP 0034.scaffold00131 753513 1 T A scaffold3021 Both SNP 0034.scaffold00131 753664 1 G A scaffold3021 Both SNP 0034.scaffold00131 753719 1 G T scaffold3021 Both SNP 0034.scaffold00131 753941 1 C T scaffold3021 Both SNP 0034.scaffold00131 753986 1 C T scaffold3021 Both SNP 0034.scaffold00131 754027 1 T C scaffold3021 Both SNP 0034.scaffold00131 754136 1 C T scaffold3021 Both SNP 0034.scaffold00131 754217 1 C A scaffold3021 ScafM SNP 0034.scaffold00131 754224 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 754259 10 CTACAAATTT .......... scaffold3021 ScafM INDEL 0034.scaffold00131 754272 13 TTATAACCGTGAT ............. scaffold3021 ScafM INDEL 0034.scaffold00131 754287 7 TGGCACA ....... scaffold3021 ScafM INDEL 0034.scaffold00131 754298 36 TTACCTCTGATACAAATTCTTGTTTGGTTGCTAGTG .................................... scaffold3021 Both SNP 0034.scaffold00131 754417 1 T G scaffold3021 Both SNP 0034.scaffold00131 754553 1 A T scaffold3021 Both SNP 0034.scaffold00131 754605 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 754686 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 754730 1 A C scaffold3021 ScafM SNP 0034.scaffold00131 754740 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 754748 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 754750 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 754815 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 754824 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 754876 1 T C scaffold3021 ScafM INDEL 0034.scaffold00131 754879 1 T . scaffold3021 ScafM SNP 0034.scaffold00131 754882 1 C A scaffold3021 ScafM INDEL 0034.scaffold00131 754884 2 .C TT scaffold3021 ScafM SNP 0034.scaffold00131 754887 1 G T scaffold3021 ScafM SNP 0034.scaffold00131 754889 3 GAT CCA scaffold3021 ScafM SNP 0034.scaffold00131 754895 2 TG GT scaffold3021 ScafM SNP 0034.scaffold00131 754944 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 754950 1 A T scaffold3021 ScafM SNP 0034.scaffold00131 754976 1 G C scaffold3021 ScafM INDEL 0034.scaffold00131 754980 3 GGA .TT scaffold3021 ScafM SNP 0034.scaffold00131 755157 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 755228 1 C A scaffold3021 ReadM SNP 0034.scaffold00131 755376 1 A T - Both SNP 0034.scaffold00131 755451 1 T A scaffold3021 Both SNP 0034.scaffold00131 755465 1 G A scaffold3021 ReadM INDEL 0034.scaffold00131 755622 2 .. AT - Both INDEL 0034.scaffold00131 755828 2 .. AT scaffold3021 Both SNP 0034.scaffold00131 755943 1 T C scaffold3021 Both SNP 0034.scaffold00131 755963 1 C T scaffold3021 Both SNP 0034.scaffold00131 755989 1 C G scaffold3021 Both SNP 0034.scaffold00131 756017 1 A G scaffold3021 Both SNP 0034.scaffold00131 756098 1 T A scaffold3021 ScafM INDEL 0034.scaffold00131 756294 11 ........... TTGTCTGATTT scaffold3021 ScafM SNP 0034.scaffold00131 756323 1 A G scaffold3021 ReadM SNP 0034.scaffold00131 756374 1 T C - ReadM SNP 0034.scaffold00131 756381 1 C A - ReadM SNP 0034.scaffold00131 756425 1 A G - ReadM INDEL 0034.scaffold00131 756503 3 TGT ... - ReadM SNP 0034.scaffold00131 756595 1 G A - ReadM SNP 0034.scaffold00131 756648 1 C A - ReadM SNP 0034.scaffold00131 756683 1 C T - ReadM SNP 0034.scaffold00131 756685 1 G A - ReadM INDEL 0034.scaffold00131 756722 1 . A - ReadM SNP 0034.scaffold00131 756755 1 T C - ReadM INDEL 0034.scaffold00131 756825 1 . C - ReadM SNP 0034.scaffold00131 756906 1 G A - ReadM SNP 0034.scaffold00131 756950 1 T A - ReadM SNP 0034.scaffold00131 756971 1 C T - ReadM SNP 0034.scaffold00131 757183 1 A G - ReadM SNP 0034.scaffold00131 757193 1 C T - ReadM SNP 0034.scaffold00131 757305 1 G A - ReadM SNP 0034.scaffold00131 757440 1 A G - ReadM SNP 0034.scaffold00131 757446 1 A G - ReadM SNP 0034.scaffold00131 757489 1 T G - ReadM SNP 0034.scaffold00131 757770 1 T C - ReadM SNP 0034.scaffold00131 757892 1 A G - ReadM SNP 0034.scaffold00131 757966 1 G A - ReadM SNP 0034.scaffold00131 757978 1 C T - ReadM INDEL 0034.scaffold00131 758094 1 . T - ReadM SNP 0034.scaffold00131 758120 1 C T - ReadM SNP 0034.scaffold00131 758202 1 C T - ReadM SNP 0034.scaffold00131 758209 1 C T - ReadM SNP 0034.scaffold00131 758265 1 T C - ReadM SNP 0034.scaffold00131 758278 1 A G - ReadM SNP 0034.scaffold00131 758336 1 A C - ReadM SNP 0034.scaffold00131 758376 1 C T - ReadM SNP 0034.scaffold00131 758405 1 T C - ReadM SNP 0034.scaffold00131 758501 1 G A - ReadM SNP 0034.scaffold00131 761536 1 T C - ReadM SNP 0034.scaffold00131 761814 1 A C - ReadM INDEL 0034.scaffold00131 761838 1 . A - ReadM SNP 0034.scaffold00131 761880 1 G T - ReadM SNP 0034.scaffold00131 761949 1 A C - ReadM SNP 0034.scaffold00131 761971 1 T A - ReadM SNP 0034.scaffold00131 762090 1 C A - ReadM SNP 0034.scaffold00131 762344 1 G A - ReadM SNP 0034.scaffold00131 762368 1 G T - ReadM SNP 0034.scaffold00131 763395 1 G C - ReadM SNP 0034.scaffold00131 763542 1 T G - ScafM SNP 0034.scaffold00131 763888 1 C G scaffold3021 Both SNP 0034.scaffold00131 763913 1 C T scaffold3021 Both SNP 0034.scaffold00131 763916 1 C G scaffold3021 ReadM INDEL 0034.scaffold00131 763989 1 . A - ScafM INDEL 0034.scaffold00131 763989 2 .G AT scaffold3021 ReadM INDEL 0034.scaffold00131 764144 1 A . - ReadM SNP 0034.scaffold00131 764173 1 G A - ReadM SNP 0034.scaffold00131 764221 1 T G - ReadM SNP 0034.scaffold00131 764241 1 A G - ReadM SNP 0034.scaffold00131 764347 1 G T - ReadM SNP 0034.scaffold00131 764360 1 C T - ReadM SNP 0034.scaffold00131 764592 1 T C - ReadM SNP 0034.scaffold00131 764636 1 T C - ReadM SNP 0034.scaffold00131 764653 1 T C - ReadM SNP 0034.scaffold00131 764717 1 T C - ReadM SNP 0034.scaffold00131 764892 1 T C - ReadM INDEL 0034.scaffold00131 765019 1 T . - Both SNP 0034.scaffold00131 765154 1 C T scaffold3021 ReadM SNP 0034.scaffold00131 765418 1 T C - ReadM SNP 0034.scaffold00131 765511 1 C T - ReadM SNP 0034.scaffold00131 765540 1 A G - ReadM SNP 0034.scaffold00131 765595 1 T A - ReadM SNP 0034.scaffold00131 765633 1 T C - ReadM SNP 0034.scaffold00131 765641 1 C T - Both SNP 0034.scaffold00131 765697 1 C A scaffold3021 Both INDEL 0034.scaffold00131 765916 3 ... AAT scaffold3021 ReadM INDEL 0034.scaffold00131 765917 2 .. AT - ReadM SNP 0034.scaffold00131 766082 1 C A - ReadM SNP 0034.scaffold00131 766139 1 A C - ReadM SNP 0034.scaffold00131 766278 1 A T - ReadM SNP 0034.scaffold00131 766334 1 C T - ReadM SNP 0034.scaffold00131 766408 1 T A - ReadM SNP 0034.scaffold00131 766424 1 T C - ReadM SNP 0034.scaffold00131 766449 1 T A - ReadM SNP 0034.scaffold00131 766488 1 G A - ReadM SNP 0034.scaffold00131 766508 1 A G - ReadM SNP 0034.scaffold00131 766564 1 G T - ReadM SNP 0034.scaffold00131 766589 1 A T - ReadM SNP 0034.scaffold00131 766658 1 C G - ReadM SNP 0034.scaffold00131 766673 1 G T - ReadM SNP 0034.scaffold00131 766863 1 C T - Both SNP 0034.scaffold00131 766901 1 G A scaffold3021 ReadM SNP 0034.scaffold00131 766920 1 T G - ReadM SNP 0034.scaffold00131 766930 1 A T - Both INDEL 0034.scaffold00131 767098 1 T . scaffold3021 Both SNP 0034.scaffold00131 767356 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 767421 1 C T scaffold3021 ScafM INDEL 0034.scaffold00131 767435 2 .. CG scaffold3021 ScafM SNP 0034.scaffold00131 767587 1 G A scaffold3021 ScafM INDEL 0034.scaffold00131 767663 7 CGACACT ....... scaffold3021 ScafM SNP 0034.scaffold00131 767677 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 769513 1 C T scaffold9347 ScafM SNP 0034.scaffold00131 769545 1 G C scaffold9347 ScafM SNP 0034.scaffold00131 769568 1 G T scaffold9347 ScafM INDEL 0034.scaffold00131 769616 1 . A scaffold9347 ScafM INDEL 0034.scaffold00131 769618 2 .. AA scaffold9347 ScafM SNP 0034.scaffold00131 769620 1 C A scaffold9347 ScafM SNP 0034.scaffold00131 769700 1 T A scaffold9347 ScafM SNP 0034.scaffold00131 769705 1 A T scaffold9347 ScafM SNP 0034.scaffold00131 769774 1 T A scaffold9347 ScafM SNP 0034.scaffold00131 769792 1 G A scaffold9347 ScafM SNP 0034.scaffold00131 773102 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 773105 1 C G scaffold3021 ScafM SNP 0034.scaffold00131 773109 1 T C scaffold3021 ScafM SNP 0034.scaffold00131 773755 1 G A scaffold3021 ScafM SNP 0034.scaffold00131 773774 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 773834 1 C T scaffold3021 ScafM SNP 0034.scaffold00131 773863 1 A G scaffold3021 ScafM SNP 0034.scaffold00131 773883 1 C A scaffold3021 ScafM INDEL 0034.scaffold00131 773890 2 AA .. scaffold3021 Both INDEL 0034.scaffold00131 773954 1 . A scaffold3021 Both SNP 0034.scaffold00131 773978 1 G C scaffold3021 ScafM SNP 0034.scaffold00131 774112 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 774118 1 A C scaffold3138 ScafM INDEL 0034.scaffold00131 774128 25 ......................... CCAACCCCCAACCCCCCACCCCTTA scaffold3138 ScafM SNP 0034.scaffold00131 774158 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 774161 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 774163 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 774204 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 774221 3 ... CTC scaffold3138 ScafM SNP 0034.scaffold00131 774518 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 774524 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 774533 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 774581 2 GC AT scaffold3138 ScafM SNP 0034.scaffold00131 774603 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 774906 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 774908 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 774920 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 774941 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 775713 2 TC CT scaffold3138 ScafM SNP 0034.scaffold00131 775735 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 775750 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 775801 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 775817 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 775832 2 TC CT scaffold3138 ScafM SNP 0034.scaffold00131 775886 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 775899 1 T C scaffold3138 Both SNP 0034.scaffold00131 775940 1 A G scaffold3138 Both SNP 0034.scaffold00131 776059 1 T C scaffold3138 Both SNP 0034.scaffold00131 776080 1 T A scaffold3138 Both INDEL 0034.scaffold00131 776090 1 C . scaffold3138 Both SNP 0034.scaffold00131 776111 1 G A scaffold3138 Both INDEL 0034.scaffold00131 776198 1 . T scaffold3138 Both SNP 0034.scaffold00131 776211 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 776332 32 ................................ GGATAAAAAGTACGTAGTATAAGTTGTTATAT scaffold3138 Both SNP 0034.scaffold00131 776404 1 A T scaffold3138 Both SNP 0034.scaffold00131 776544 1 C A scaffold3138 Both SNP 0034.scaffold00131 776559 1 T C scaffold3138 Both SNP 0034.scaffold00131 776577 1 T C scaffold3138 ScafM INDEL 0034.scaffold00131 776621 3 CTA ... scaffold3138 ScafM SNP 0034.scaffold00131 776649 1 A G scaffold3138 Both SNP 0034.scaffold00131 776713 1 C A scaffold3138 ReadM SNP 0034.scaffold00131 776773 1 C T - ReadM SNP 0034.scaffold00131 776844 1 C G - ReadM SNP 0034.scaffold00131 776854 1 T C - Both SNP 0034.scaffold00131 776913 1 G C scaffold3138 Both INDEL 0034.scaffold00131 776917 1 . T scaffold3138 Both SNP 0034.scaffold00131 776985 1 G A scaffold3138 Both SNP 0034.scaffold00131 777003 1 G A scaffold3138 Both SNP 0034.scaffold00131 777021 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 777044 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 777081 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 777099 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 777114 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 777130 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 777136 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 777174 2 AA TT scaffold3138 ScafM SNP 0034.scaffold00131 777205 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 777215 3 ... TTT scaffold3138 ScafM SNP 0034.scaffold00131 777227 2 TG CA scaffold3138 ScafM SNP 0034.scaffold00131 777258 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 777267 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 777273 1 T C scaffold3138 ScafM INDEL 0034.scaffold00131 777280 2 AA .. scaffold3138 ScafM SNP 0034.scaffold00131 777294 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 777326 1 G A scaffold3138 Both SNP 0034.scaffold00131 777352 1 C A scaffold3138 Both SNP 0034.scaffold00131 777409 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 777459 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 777482 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 777546 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 777565 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 777568 4 .... TAAT scaffold3138 ScafM INDEL 0034.scaffold00131 777583 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 777656 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 777679 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 779527 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 779547 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 779554 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 779570 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 779596 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 779601 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 779618 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 779689 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 779725 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 779731 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 779742 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 779776 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 781667 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 781672 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 781683 2 AG .. scaffold3138 ScafM SNP 0034.scaffold00131 781693 2 CA GG scaffold3138 ScafM SNP 0034.scaffold00131 781723 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 781749 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 781756 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 781765 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 781794 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 781831 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 781851 1 C T scaffold3138 ReadM SNP 0034.scaffold00131 781903 1 A G - ReadM SNP 0034.scaffold00131 781910 1 A C - ScafM SNP 0034.scaffold00131 781995 2 CT AC scaffold3138 ScafM INDEL 0034.scaffold00131 782126 5 CAATT ..... scaffold3138 ScafM INDEL 0034.scaffold00131 782159 5 ..... GGGAA scaffold3138 ScafM INDEL 0034.scaffold00131 782165 1 . T scaffold3138 ScafM SNP 0034.scaffold00131 782200 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 782266 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 782287 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 782299 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 782395 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 782437 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 783038 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 783040 3 TAG CGT scaffold3138 ScafM SNP 0034.scaffold00131 783516 1 T C scaffold3138 ScafM INDEL 0034.scaffold00131 783522 1 C . scaffold3138 ScafM SNP 0034.scaffold00131 783527 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 783532 2 .. GA scaffold3138 ScafM SNP 0034.scaffold00131 783553 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 783561 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 783571 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 783577 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 783592 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 783632 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 783670 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 783678 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 783680 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 783688 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 783709 4 TATG .... scaffold3138 ScafM SNP 0034.scaffold00131 783731 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 784064 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 784094 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 784310 1 C . scaffold3138 ScafM SNP 0034.scaffold00131 784319 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 784335 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 784339 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 784369 2 TT .. scaffold3138 ScafM SNP 0034.scaffold00131 784467 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 784518 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 784580 4 ATAT .... scaffold3138 ScafM INDEL 0034.scaffold00131 784721 2 .. AA scaffold3138 ScafM SNP 0034.scaffold00131 784740 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 785148 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 785151 2 AA GT scaffold3138 ScafM SNP 0034.scaffold00131 785168 2 AA GG scaffold3138 ScafM SNP 0034.scaffold00131 785202 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 785230 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 785283 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 785979 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 786009 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 786016 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 786043 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 786069 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 786080 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 786118 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 786151 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 786204 1 A C scaffold3138 ScafM INDEL 0034.scaffold00131 786252 3 ... AAT scaffold3138 ScafM INDEL 0034.scaffold00131 786413 1 T . scaffold3138 ScafM SNP 0034.scaffold00131 786463 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 786477 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 786481 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 786489 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 786506 2 .T AG scaffold3138 ScafM SNP 0034.scaffold00131 787887 2 AT TC scaffold3138 ScafM SNP 0034.scaffold00131 787953 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 787957 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 788020 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 788030 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 788035 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 788044 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 788268 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 788288 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 788297 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 788311 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 788346 1 . A scaffold3138 ScafM INDEL 0034.scaffold00131 788361 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 788371 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 788433 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 788465 3 ... CAA scaffold3138 ScafM SNP 0034.scaffold00131 788476 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 788841 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 788944 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 788967 1 G T scaffold3138 ScafM INDEL 0034.scaffold00131 789024 4 ATAT .... scaffold3138 ScafM SNP 0034.scaffold00131 789583 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 789590 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 789595 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 789601 3 AAT ... scaffold3138 ScafM SNP 0034.scaffold00131 789607 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 789626 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 789631 2 CT TC scaffold3138 ScafM SNP 0034.scaffold00131 789640 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 789646 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 789651 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 789659 4 TTAA .... scaffold3138 ScafM SNP 0034.scaffold00131 789671 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 789682 2 AC GT scaffold3138 ScafM SNP 0034.scaffold00131 789750 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 789753 1 T C scaffold3138 Both SNP 0034.scaffold00131 789944 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 790133 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 790153 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 790164 1 C A scaffold3138 ScafM INDEL 0034.scaffold00131 790175 3 ATT ... scaffold3138 ScafM SNP 0034.scaffold00131 790180 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 790182 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 790215 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 790237 1 G C scaffold3138 ScafM INDEL 0034.scaffold00131 790246 11 GTGAAAATAAC ........... scaffold3138 ScafM SNP 0034.scaffold00131 790269 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 790475 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 790477 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 790510 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 790526 1 C G scaffold3138 ScafM INDEL 0034.scaffold00131 790843 1 A . scaffold3138 ScafM SNP 0034.scaffold00131 790855 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 790877 16 GGGAAACGCAATAAGC ................ scaffold3138 ScafM SNP 0034.scaffold00131 790911 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 790937 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 790971 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 790993 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 791190 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 791193 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 791221 7 AAGTTGT ....... scaffold3138 ScafM SNP 0034.scaffold00131 791245 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 791256 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 792261 55 CTTCTTGTCTTCTTGATCAGATCCATCAGTTAAAGATTGAAAAAGTCTTAAAGAG ....................................................... scaffold3138 ScafM INDEL 0034.scaffold00131 792324 8 AAAGTAAC ........ scaffold3138 ScafM INDEL 0034.scaffold00131 792335 18 TCTAGAGGATCCGGACTC .................. scaffold3138 ScafM SNP 0034.scaffold00131 792373 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 792435 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 792438 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 792442 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 792470 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 792493 2 .. TC scaffold3138 ScafM SNP 0034.scaffold00131 792495 2 GC TT scaffold3138 ScafM SNP 0034.scaffold00131 792498 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 792500 6 ...... GGTATA scaffold3138 ScafM INDEL 0034.scaffold00131 792501 1 . G scaffold3138 ScafM INDEL 0034.scaffold00131 792502 5 ..... GCAAC scaffold3138 ScafM INDEL 0034.scaffold00131 792503 1 . C scaffold3138 ScafM SNP 0034.scaffold00131 792646 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 792651 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 792882 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 792894 2 TA .. scaffold3138 ScafM INDEL 0034.scaffold00131 792927 1 T . scaffold3138 ScafM SNP 0034.scaffold00131 792935 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 792937 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 792950 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 792956 2 GT TG scaffold3138 ScafM SNP 0034.scaffold00131 792967 1 G A scaffold3138 ScafM INDEL 0034.scaffold00131 792993 2 AG .. scaffold3138 ScafM INDEL 0034.scaffold00131 792997 1 T . scaffold3138 ScafM SNP 0034.scaffold00131 793003 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 793126 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793160 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 793163 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 793173 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 793212 2 .. TA scaffold3138 ScafM SNP 0034.scaffold00131 793220 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793235 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 793252 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 793262 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793308 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793332 2 CT AG scaffold3138 ScafM SNP 0034.scaffold00131 793335 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 793347 2 GT TA scaffold3138 ScafM INDEL 0034.scaffold00131 793368 1 . T scaffold3138 ScafM SNP 0034.scaffold00131 793370 1 A T scaffold3138 ScafM INDEL 0034.scaffold00131 793379 1 . G scaffold3138 ScafM SNP 0034.scaffold00131 793389 1 T C scaffold3138 ScafM INDEL 0034.scaffold00131 793401 5 ..... TAGTT scaffold3138 ScafM SNP 0034.scaffold00131 793449 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 793465 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 793476 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793487 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 793648 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 793654 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 793666 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793682 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 793685 1 G T scaffold3138 ScafM INDEL 0034.scaffold00131 793694 1 . T scaffold3138 ScafM SNP 0034.scaffold00131 793697 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793716 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 793721 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793750 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793760 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793773 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 793809 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 793828 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 793830 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 793835 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 793870 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 793878 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 793919 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 793922 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 793927 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 793929 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 793939 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 794161 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 794179 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 794193 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 794312 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 794318 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 794325 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 794335 1 T . scaffold3138 ScafM SNP 0034.scaffold00131 794340 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 794363 1 A G scaffold3138 Both SNP 0034.scaffold00131 794437 1 T C scaffold3138 ScafM INDEL 0034.scaffold00131 794629 5 ..... TTTTT scaffold3138 Both SNP 0034.scaffold00131 794703 1 T G scaffold3138 Both SNP 0034.scaffold00131 794795 1 C A scaffold3138 Both SNP 0034.scaffold00131 794882 1 C T scaffold3138 Both SNP 0034.scaffold00131 794924 1 A C scaffold3138 Both SNP 0034.scaffold00131 794962 1 T C scaffold3138 Both SNP 0034.scaffold00131 795253 1 T G scaffold3138 Both SNP 0034.scaffold00131 795292 1 T A scaffold3138 Both SNP 0034.scaffold00131 795348 1 C T scaffold3138 Both SNP 0034.scaffold00131 795351 1 C T scaffold3138 ReadM SNP 0034.scaffold00131 795452 1 A G - ReadM SNP 0034.scaffold00131 795536 1 G C - ScafM SNP 0034.scaffold00131 795723 1 T G scaffold3138 ScafM INDEL 0034.scaffold00131 795729 3 ATT ... scaffold3138 ScafM INDEL 0034.scaffold00131 795748 1 C . scaffold3138 ScafM SNP 0034.scaffold00131 795750 1 C A scaffold3138 ScafM INDEL 0034.scaffold00131 795764 1 T . scaffold3138 Both SNP 0034.scaffold00131 795841 1 G T scaffold3138 ReadM SNP 0034.scaffold00131 795892 1 A G - ReadM INDEL 0034.scaffold00131 796057 3 GAT ... - ReadM SNP 0034.scaffold00131 796152 1 T A - ReadM SNP 0034.scaffold00131 796364 1 C T - ReadM SNP 0034.scaffold00131 796391 1 T C - ReadM SNP 0034.scaffold00131 796507 1 G A - ReadM SNP 0034.scaffold00131 796552 1 T C - ReadM SNP 0034.scaffold00131 796573 1 G A - ReadM SNP 0034.scaffold00131 796588 1 T C - ScafM INDEL 0034.scaffold00131 796705 17 TGAATTCGGAAATCAAT ................. scaffold3138 ReadM SNP 0034.scaffold00131 796897 1 A G - ReadM SNP 0034.scaffold00131 796958 1 A G - ReadM SNP 0034.scaffold00131 796987 1 A G - ReadM INDEL 0034.scaffold00131 797006 1 G . - ReadM SNP 0034.scaffold00131 797056 1 C T - ReadM SNP 0034.scaffold00131 797092 1 T C - ReadM SNP 0034.scaffold00131 797130 1 A G - ReadM SNP 0034.scaffold00131 797195 1 G A - ReadM SNP 0034.scaffold00131 797218 1 G T - ReadM INDEL 0034.scaffold00131 797276 1 . A - ReadM SNP 0034.scaffold00131 797294 1 G T - ReadM SNP 0034.scaffold00131 797302 1 T A - ReadM SNP 0034.scaffold00131 797371 1 T G - ReadM SNP 0034.scaffold00131 797393 1 T C - ReadM SNP 0034.scaffold00131 797437 1 G A - ReadM SNP 0034.scaffold00131 797456 1 G A - ReadM SNP 0034.scaffold00131 797494 1 A G - ReadM SNP 0034.scaffold00131 797625 1 G A - ReadM SNP 0034.scaffold00131 797652 1 T C - ReadM SNP 0034.scaffold00131 797746 1 A G - ReadM SNP 0034.scaffold00131 797862 1 G T - Both INDEL 0034.scaffold00131 797876 1 . A scaffold3138 Both SNP 0034.scaffold00131 797922 1 G A scaffold3138 ReadM SNP 0034.scaffold00131 797960 1 C T - ReadM SNP 0034.scaffold00131 798038 1 T A - Both SNP 0034.scaffold00131 798076 1 C T scaffold3138 Both SNP 0034.scaffold00131 798088 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 798143 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 798145 1 G A scaffold3138 ReadM SNP 0034.scaffold00131 798271 1 T C - ReadM SNP 0034.scaffold00131 798297 1 G C - ReadM SNP 0034.scaffold00131 798315 1 A T - ReadM SNP 0034.scaffold00131 798374 1 G A - ReadM SNP 0034.scaffold00131 798463 1 A G - ReadM SNP 0034.scaffold00131 798490 1 C T - ScafM SNP 0034.scaffold00131 798605 1 C T scaffold3138 Both SNP 0034.scaffold00131 798790 1 G A scaffold3138 Both INDEL 0034.scaffold00131 798807 1 T . scaffold3138 Both SNP 0034.scaffold00131 798827 1 T G scaffold3138 ReadM SNP 0034.scaffold00131 798860 1 G T - ReadM SNP 0034.scaffold00131 798974 1 G A - ReadM SNP 0034.scaffold00131 798978 1 T C - Both SNP 0034.scaffold00131 799178 1 G T scaffold3138 ReadM SNP 0034.scaffold00131 799250 1 T G - ReadM SNP 0034.scaffold00131 799315 1 T C - ReadM SNP 0034.scaffold00131 799368 1 T A - ReadM SNP 0034.scaffold00131 799370 1 G A - ReadM SNP 0034.scaffold00131 799496 1 T C - ReadM SNP 0034.scaffold00131 799584 1 G A - ReadM SNP 0034.scaffold00131 799606 1 G A - ReadM SNP 0034.scaffold00131 799652 1 T C - ReadM SNP 0034.scaffold00131 799695 1 T G - ReadM SNP 0034.scaffold00131 799701 1 G T - ReadM SNP 0034.scaffold00131 799796 1 A G - ReadM SNP 0034.scaffold00131 799801 1 T C - ReadM SNP 0034.scaffold00131 799821 1 T C - ReadM SNP 0034.scaffold00131 799861 1 T A - ReadM SNP 0034.scaffold00131 799873 1 T C - ReadM SNP 0034.scaffold00131 799964 1 G A - ReadM SNP 0034.scaffold00131 799974 1 G A - ReadM SNP 0034.scaffold00131 800063 1 C T - ReadM SNP 0034.scaffold00131 800107 1 T C - ReadM SNP 0034.scaffold00131 800122 1 G A - ReadM SNP 0034.scaffold00131 800186 1 G A - ReadM SNP 0034.scaffold00131 800390 1 A G - ReadM SNP 0034.scaffold00131 800399 1 T A - ScafM SNP 0034.scaffold00131 800880 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 800908 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 800931 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 800941 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 800949 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 800951 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 800978 1 . A scaffold3138 ScafM INDEL 0034.scaffold00131 801286 1 T . scaffold3138 ReadM SNP 0034.scaffold00131 801355 1 A G - ReadM SNP 0034.scaffold00131 801676 1 A T - ReadM INDEL 0034.scaffold00131 801684 2 TA .. - ReadM SNP 0034.scaffold00131 801798 1 G C - ReadM SNP 0034.scaffold00131 801801 1 G T - ReadM SNP 0034.scaffold00131 801806 1 G A - ReadM SNP 0034.scaffold00131 801909 1 T C - ReadM SNP 0034.scaffold00131 801974 1 A T - ReadM SNP 0034.scaffold00131 802053 1 A T - ReadM SNP 0034.scaffold00131 802067 1 A G - ReadM SNP 0034.scaffold00131 802083 1 G A - ReadM SNP 0034.scaffold00131 802255 1 C A - ReadM SNP 0034.scaffold00131 802332 1 A T - ReadM SNP 0034.scaffold00131 802431 1 C G - ReadM SNP 0034.scaffold00131 803446 1 C T - ReadM SNP 0034.scaffold00131 803488 1 A G - ReadM SNP 0034.scaffold00131 806228 1 T C - ReadM SNP 0034.scaffold00131 806478 1 C A - ReadM SNP 0034.scaffold00131 806535 1 A G - ScafM SNP 0034.scaffold00131 806642 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 806644 1 C G scaffold3138 ScafM INDEL 0034.scaffold00131 806662 1 A . scaffold3138 ScafM SNP 0034.scaffold00131 806664 3 GAC AGG scaffold3138 Both SNP 0034.scaffold00131 806731 1 A G scaffold3138 Both SNP 0034.scaffold00131 806778 1 G C scaffold3138 Both SNP 0034.scaffold00131 806809 1 T C scaffold3138 Both SNP 0034.scaffold00131 806844 1 A C scaffold3138 Both SNP 0034.scaffold00131 806855 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 806903 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 806912 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 806920 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 806939 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 806945 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 806961 1 G A scaffold3138 ReadM SNP 0034.scaffold00131 807015 1 T A - ReadM SNP 0034.scaffold00131 807033 1 T G - ReadM SNP 0034.scaffold00131 807058 1 C T - ReadM INDEL 0034.scaffold00131 807156 1 A . - ReadM INDEL 0034.scaffold00131 807290 1 A . - ReadM SNP 0034.scaffold00131 807350 1 A T - ReadM SNP 0034.scaffold00131 807394 1 C T - ReadM SNP 0034.scaffold00131 807458 1 T A - ReadM SNP 0034.scaffold00131 807467 1 T G - ReadM SNP 0034.scaffold00131 807519 1 T C - ReadM SNP 0034.scaffold00131 807619 1 G C - ReadM SNP 0034.scaffold00131 807685 1 C T - ReadM SNP 0034.scaffold00131 807827 1 A G - ReadM SNP 0034.scaffold00131 807914 1 A C - ReadM SNP 0034.scaffold00131 808193 1 T C - ReadM SNP 0034.scaffold00131 808532 1 G A - ReadM SNP 0034.scaffold00131 808543 1 A G - ReadM SNP 0034.scaffold00131 808580 1 C T - ReadM SNP 0034.scaffold00131 808722 1 A G - ReadM SNP 0034.scaffold00131 808727 1 G C - ReadM SNP 0034.scaffold00131 808750 1 T C - ReadM SNP 0034.scaffold00131 808794 1 G C - ReadM INDEL 0034.scaffold00131 808819 1 . A - ReadM SNP 0034.scaffold00131 808864 1 C G - ReadM SNP 0034.scaffold00131 808875 1 A G - ReadM SNP 0034.scaffold00131 809005 1 C T - ReadM SNP 0034.scaffold00131 811280 1 T G - ReadM SNP 0034.scaffold00131 811320 1 T C - ReadM SNP 0034.scaffold00131 811367 1 T G - ReadM SNP 0034.scaffold00131 811389 1 T A - ReadM SNP 0034.scaffold00131 811412 1 A C - ReadM SNP 0034.scaffold00131 811456 1 A G - ReadM SNP 0034.scaffold00131 811494 1 A C - ReadM SNP 0034.scaffold00131 811528 1 C A - ReadM SNP 0034.scaffold00131 811572 1 A T - ReadM SNP 0034.scaffold00131 811611 1 C T - ReadM INDEL 0034.scaffold00131 811724 1 A . - ReadM SNP 0034.scaffold00131 811809 1 C T - ReadM SNP 0034.scaffold00131 811865 1 G A - ReadM SNP 0034.scaffold00131 811914 1 C G - ReadM SNP 0034.scaffold00131 811939 1 A T - ReadM SNP 0034.scaffold00131 811969 1 T C - ReadM SNP 0034.scaffold00131 812012 1 T C - ReadM SNP 0034.scaffold00131 812126 1 T C - ReadM SNP 0034.scaffold00131 812161 1 C G - ReadM SNP 0034.scaffold00131 812226 1 C T - ReadM SNP 0034.scaffold00131 812237 1 G A - ReadM SNP 0034.scaffold00131 812264 1 G C - ReadM SNP 0034.scaffold00131 812313 1 A C - ReadM SNP 0034.scaffold00131 812318 1 G A - ReadM SNP 0034.scaffold00131 812455 1 G A - ReadM SNP 0034.scaffold00131 812500 1 T G - ReadM SNP 0034.scaffold00131 812603 1 T C - ReadM SNP 0034.scaffold00131 812628 1 A G - ReadM SNP 0034.scaffold00131 812630 1 A G - ReadM SNP 0034.scaffold00131 812713 1 C T - ReadM SNP 0034.scaffold00131 812715 1 C T - ReadM SNP 0034.scaffold00131 812758 1 T C - ReadM SNP 0034.scaffold00131 812767 1 G C - ReadM SNP 0034.scaffold00131 812808 1 T C - ReadM SNP 0034.scaffold00131 812862 1 A T - ReadM SNP 0034.scaffold00131 813064 1 G A - ReadM SNP 0034.scaffold00131 813172 1 T A - ReadM SNP 0034.scaffold00131 813184 1 T C - ReadM SNP 0034.scaffold00131 813353 1 C T - Both SNP 0034.scaffold00131 813398 1 C A scaffold3138 Both SNP 0034.scaffold00131 813425 1 C A scaffold3138 Both SNP 0034.scaffold00131 813489 1 C G scaffold3138 Both SNP 0034.scaffold00131 813521 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813542 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813551 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813563 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813611 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 813633 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 813635 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 813654 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813662 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 813688 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 813749 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 813758 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 813796 1 C A scaffold3138 ScafM INDEL 0034.scaffold00131 813820 1 T . scaffold3138 ScafM SNP 0034.scaffold00131 813992 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 814001 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 814025 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 814087 1 T C scaffold3138 ReadM SNP 0034.scaffold00131 814560 1 A G - ReadM SNP 0034.scaffold00131 814562 1 T G - ReadM SNP 0034.scaffold00131 814702 1 G A - ReadM SNP 0034.scaffold00131 814736 1 A T - ReadM SNP 0034.scaffold00131 814770 1 A C - ReadM SNP 0034.scaffold00131 814842 1 T C - ReadM SNP 0034.scaffold00131 814903 1 C G - ReadM SNP 0034.scaffold00131 814921 2 CC TA - ReadM SNP 0034.scaffold00131 815167 1 A C - ReadM SNP 0034.scaffold00131 815179 1 A G - ReadM SNP 0034.scaffold00131 815256 1 T C - ReadM SNP 0034.scaffold00131 815298 1 C A - ReadM SNP 0034.scaffold00131 815321 1 A G - ScafM SNP 0034.scaffold00131 817204 1 G A scaffold2307 ScafM SNP 0034.scaffold00131 817206 1 G A scaffold2307 ScafM SNP 0034.scaffold00131 817211 1 T A scaffold2307 ScafM SNP 0034.scaffold00131 817218 3 CCC ATG scaffold2307 ScafM SNP 0034.scaffold00131 817229 1 A G scaffold2307 ScafM SNP 0034.scaffold00131 817231 1 T A scaffold2307 ScafM SNP 0034.scaffold00131 817234 1 A C scaffold2307 ScafM SNP 0034.scaffold00131 817248 1 A G scaffold2307 ScafM SNP 0034.scaffold00131 817254 1 G A scaffold2307 ScafM SNP 0034.scaffold00131 817275 2 TA CC scaffold2307 ScafM INDEL 0034.scaffold00131 817346 3 ... GGA scaffold2307 ScafM SNP 0034.scaffold00131 817351 1 T A scaffold2307 ScafM SNP 0034.scaffold00131 817362 1 A C scaffold2307 ScafM SNP 0034.scaffold00131 817365 1 A C scaffold2307 ScafM SNP 0034.scaffold00131 817377 1 A G scaffold2307 ScafM SNP 0034.scaffold00131 817379 1 T C scaffold2307 ScafM SNP 0034.scaffold00131 817384 1 C A scaffold2307 ScafM INDEL 0034.scaffold00131 817398 1 . T scaffold2307 ScafM SNP 0034.scaffold00131 817415 1 G T scaffold2307 ScafM SNP 0034.scaffold00131 817480 1 G A scaffold2307 ScafM INDEL 0034.scaffold00131 817637 1 A . scaffold2307 ScafM SNP 0034.scaffold00131 817639 1 T C scaffold2307 ReadM SNP 0034.scaffold00131 817883 2 CC TT - ReadM SNP 0034.scaffold00131 817931 1 A C - ReadM SNP 0034.scaffold00131 817978 1 A C - ReadM SNP 0034.scaffold00131 818006 1 T C - ReadM SNP 0034.scaffold00131 818047 1 T C - ReadM SNP 0034.scaffold00131 818278 1 G A - ReadM SNP 0034.scaffold00131 818317 1 G T - ReadM SNP 0034.scaffold00131 818433 1 T G - ReadM INDEL 0034.scaffold00131 818668 1 A . - Both SNP 0034.scaffold00131 819065 1 A G scaffold3138 Both SNP 0034.scaffold00131 819171 1 T A scaffold3138 Both SNP 0034.scaffold00131 819176 1 T C scaffold3138 Both SNP 0034.scaffold00131 819183 1 G A scaffold3138 Both SNP 0034.scaffold00131 819216 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 819251 1 C A scaffold3138 ReadM SNP 0034.scaffold00131 819677 1 A T - ReadM SNP 0034.scaffold00131 820090 1 T C - ReadM SNP 0034.scaffold00131 820133 1 T C - ReadM SNP 0034.scaffold00131 820172 1 T C - ReadM SNP 0034.scaffold00131 820315 1 C T - ReadM SNP 0034.scaffold00131 820580 1 G T - ReadM SNP 0034.scaffold00131 820632 1 C G - ReadM SNP 0034.scaffold00131 820646 1 A G - ReadM SNP 0034.scaffold00131 820703 1 G C - ReadM SNP 0034.scaffold00131 820717 1 T C - ReadM SNP 0034.scaffold00131 820973 1 T C - ReadM SNP 0034.scaffold00131 821613 1 G C - ReadM SNP 0034.scaffold00131 821805 1 T C - ReadM SNP 0034.scaffold00131 821809 1 T C - ReadM SNP 0034.scaffold00131 821992 1 T C - ReadM SNP 0034.scaffold00131 822022 1 T A - ReadM SNP 0034.scaffold00131 822101 1 G T - ReadM SNP 0034.scaffold00131 822105 1 T C - ReadM SNP 0034.scaffold00131 822136 1 G C - ReadM SNP 0034.scaffold00131 822212 1 C T - ReadM SNP 0034.scaffold00131 822794 1 A C - ReadM SNP 0034.scaffold00131 822810 1 T C - ReadM SNP 0034.scaffold00131 822883 1 T G - ReadM SNP 0034.scaffold00131 822940 1 T C - ReadM SNP 0034.scaffold00131 822947 1 C T - ReadM SNP 0034.scaffold00131 822995 1 C T - ReadM SNP 0034.scaffold00131 823048 1 G A - ReadM INDEL 0034.scaffold00131 823312 1 G . - ReadM SNP 0034.scaffold00131 823378 1 T C - ReadM SNP 0034.scaffold00131 823400 1 T C - ReadM SNP 0034.scaffold00131 823467 1 A G - ReadM SNP 0034.scaffold00131 823490 1 G A - ReadM SNP 0034.scaffold00131 823636 1 G T - ReadM SNP 0034.scaffold00131 823773 1 A T - ReadM SNP 0034.scaffold00131 823875 1 A G - ReadM SNP 0034.scaffold00131 823895 1 A G - ReadM SNP 0034.scaffold00131 823910 1 A T - ReadM SNP 0034.scaffold00131 823971 1 A G - Both SNP 0034.scaffold00131 824275 1 C T scaffold3138 Both SNP 0034.scaffold00131 824297 1 T G scaffold3138 Both SNP 0034.scaffold00131 824306 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 824322 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 824357 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 824385 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 824390 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 824405 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 824427 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 824431 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 824481 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 824505 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 824519 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 824532 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 824535 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 824547 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 824565 2 GT AC scaffold3138 ReadM SNP 0034.scaffold00131 824595 1 C A - ReadM SNP 0034.scaffold00131 824627 1 T A - ReadM SNP 0034.scaffold00131 824669 1 G A - ReadM SNP 0034.scaffold00131 824696 1 C A - ReadM SNP 0034.scaffold00131 824756 1 G A - ReadM SNP 0034.scaffold00131 824950 1 A C - ReadM SNP 0034.scaffold00131 824954 1 A T - ReadM SNP 0034.scaffold00131 825654 1 T G - ReadM SNP 0034.scaffold00131 826185 1 A G - ScafM SNP 0034.scaffold00131 827578 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 827604 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 827650 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 827686 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 827690 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 827702 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 827734 1 C A scaffold3138 ScafM INDEL 0034.scaffold00131 827747 1 . G scaffold3138 ScafM SNP 0034.scaffold00131 827773 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 827825 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 827828 1 T A scaffold3138 ReadM SNP 0034.scaffold00131 828003 1 C T - ReadM SNP 0034.scaffold00131 828283 1 T G - ScafM SNP 0034.scaffold00131 828324 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 828332 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 828341 1 T A scaffold3138 Both SNP 0034.scaffold00131 828487 1 T C scaffold3138 Both SNP 0034.scaffold00131 828506 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 828614 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 828629 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 828632 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 828643 1 T C scaffold3138 Both SNP 0034.scaffold00131 828656 1 G T scaffold3138 ReadM SNP 0034.scaffold00131 828708 1 C A - ScafM SNP 0034.scaffold00131 833554 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 833713 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 833798 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 833829 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 833863 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 833931 1 C T scaffold3138 ScafM INDEL 0034.scaffold00131 833963 1 . G scaffold3138 ScafM INDEL 0034.scaffold00131 833981 2 CT .. scaffold3138 ScafM SNP 0034.scaffold00131 834078 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 834090 1 T C scaffold3138 ReadM SNP 0034.scaffold00131 834313 1 A C - ReadM SNP 0034.scaffold00131 834357 1 A T - ReadM SNP 0034.scaffold00131 834839 1 G A - ReadM SNP 0034.scaffold00131 835639 1 G A - ReadM SNP 0034.scaffold00131 835735 1 G A - ReadM SNP 0034.scaffold00131 835757 1 G T - ReadM SNP 0034.scaffold00131 835881 1 T C - ReadM SNP 0034.scaffold00131 835948 1 C T - ReadM SNP 0034.scaffold00131 836036 1 T C - ReadM INDEL 0034.scaffold00131 836100 1 . A - ReadM SNP 0034.scaffold00131 836410 1 A T - ReadM INDEL 0034.scaffold00131 836415 1 C . - ReadM SNP 0034.scaffold00131 836546 1 C T - ReadM SNP 0034.scaffold00131 836554 1 G A - ReadM SNP 0034.scaffold00131 836597 1 T C - ScafM INDEL 0034.scaffold00131 836638 3 ... GCA scaffold3138 ScafM INDEL 0034.scaffold00131 836690 2 AA .. scaffold3138 ScafM SNP 0034.scaffold00131 836695 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 837011 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 837135 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 837137 1 T C scaffold3138 Both SNP 0034.scaffold00131 837141 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 837244 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 837448 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 837519 1 G C scaffold3138 ScafM INDEL 0034.scaffold00131 837676 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 837703 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 837726 1 C T scaffold3138 Both SNP 0034.scaffold00131 838005 1 G T scaffold3138 Both SNP 0034.scaffold00131 838101 1 T C scaffold3138 Both INDEL 0034.scaffold00131 838138 1 A . scaffold3138 Both SNP 0034.scaffold00131 838163 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 838185 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 838202 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 838229 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 838289 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 838335 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 838401 2 CC GA scaffold3138 ScafM SNP 0034.scaffold00131 838427 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 838550 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 838580 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 838600 2 GG AC scaffold3138 ScafM SNP 0034.scaffold00131 838667 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 838680 3 TTT AAA scaffold3138 ScafM SNP 0034.scaffold00131 838701 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 838755 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 838787 1 G A scaffold3138 ReadM SNP 0034.scaffold00131 839371 1 A G - ReadM SNP 0034.scaffold00131 839396 1 G T - ReadM SNP 0034.scaffold00131 839417 1 G A - ReadM SNP 0034.scaffold00131 839877 1 T C - ReadM INDEL 0034.scaffold00131 839924 1 . T - ReadM SNP 0034.scaffold00131 840521 1 A G - ScafM SNP 0034.scaffold00131 841088 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 841094 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 841132 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 841205 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 841222 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 841288 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 841319 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 841360 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 841371 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 841395 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 841461 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 841464 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 841472 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 841483 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 841528 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 841530 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 841636 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 841673 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 841684 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 841790 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 841932 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 841973 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 842064 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842123 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 842141 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842151 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 842185 1 A C scaffold3138 ScafM INDEL 0034.scaffold00131 842255 3 CAA ..T scaffold3138 ScafM SNP 0034.scaffold00131 842294 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842339 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 842361 1 C A scaffold3138 Both SNP 0034.scaffold00131 842390 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 842413 1 G T scaffold3138 Both SNP 0034.scaffold00131 842519 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 842740 1 C A scaffold3138 ScafM SNP 0034.scaffold00131 842755 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842758 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842824 1 G C scaffold3138 ScafM INDEL 0034.scaffold00131 842826 4 .... AAAA scaffold3138 ScafM SNP 0034.scaffold00131 842841 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 842861 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 842875 1 G A scaffold3138 ReadM SNP 0034.scaffold00131 842977 1 C T - ReadM SNP 0034.scaffold00131 843068 1 A T - ReadM SNP 0034.scaffold00131 843181 1 A T - ReadM SNP 0034.scaffold00131 843191 1 A G - ScafM SNP 0034.scaffold00131 843288 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 843297 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 843304 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 843333 1 C T scaffold3138 Both SNP 0034.scaffold00131 843383 1 A T scaffold3138 Both SNP 0034.scaffold00131 843463 1 A G scaffold3138 Both SNP 0034.scaffold00131 843508 1 C A scaffold3138 ReadM SNP 0034.scaffold00131 843642 1 T C - ReadM SNP 0034.scaffold00131 843726 1 A G - ReadM SNP 0034.scaffold00131 843752 1 C T - ReadM SNP 0034.scaffold00131 843821 1 A G - ReadM SNP 0034.scaffold00131 843836 1 C T - ReadM SNP 0034.scaffold00131 843859 1 G T - ReadM SNP 0034.scaffold00131 844013 1 G A - ReadM SNP 0034.scaffold00131 844161 1 A T - ReadM SNP 0034.scaffold00131 844212 1 C T - ReadM SNP 0034.scaffold00131 844395 1 G A - ReadM SNP 0034.scaffold00131 844430 1 A T - ReadM SNP 0034.scaffold00131 844433 1 A C - ReadM SNP 0034.scaffold00131 844577 1 A G - ReadM SNP 0034.scaffold00131 844628 1 C G - ReadM SNP 0034.scaffold00131 844651 1 C G - ReadM SNP 0034.scaffold00131 845001 1 A G - ReadM SNP 0034.scaffold00131 845007 1 A C - ReadM SNP 0034.scaffold00131 845091 1 A G - ReadM SNP 0034.scaffold00131 845103 1 A T - ReadM SNP 0034.scaffold00131 845124 1 C T - ReadM SNP 0034.scaffold00131 845130 1 C T - ReadM SNP 0034.scaffold00131 845246 1 A G - ReadM SNP 0034.scaffold00131 845251 1 A G - ReadM INDEL 0034.scaffold00131 845337 1 . C - ReadM SNP 0034.scaffold00131 845364 1 C T - ReadM SNP 0034.scaffold00131 845404 1 G A - ReadM INDEL 0034.scaffold00131 845457 2 AT .. - ReadM SNP 0034.scaffold00131 845714 1 A T - ReadM SNP 0034.scaffold00131 845782 1 A G - ReadM SNP 0034.scaffold00131 845879 1 T C - ReadM SNP 0034.scaffold00131 845938 1 T C - ReadM INDEL 0034.scaffold00131 845946 1 C . - ReadM SNP 0034.scaffold00131 845987 1 T C - ReadM SNP 0034.scaffold00131 846020 1 T C - ScafM SNP 0034.scaffold00131 846079 1 T C scaffold3138 Both SNP 0034.scaffold00131 846102 1 T C scaffold3138 Both SNP 0034.scaffold00131 846111 1 T A scaffold3138 ReadM SNP 0034.scaffold00131 846276 1 C A - ReadM SNP 0034.scaffold00131 846328 1 T C - ReadM SNP 0034.scaffold00131 846386 1 A G - ReadM SNP 0034.scaffold00131 846426 1 G A - ReadM SNP 0034.scaffold00131 846446 1 C T - ReadM SNP 0034.scaffold00131 846559 1 G A - ReadM SNP 0034.scaffold00131 846646 1 A G - ReadM SNP 0034.scaffold00131 846726 1 G A - ReadM SNP 0034.scaffold00131 846770 1 G A - ReadM SNP 0034.scaffold00131 846827 1 T G - ReadM SNP 0034.scaffold00131 846852 1 C T - ReadM SNP 0034.scaffold00131 846895 1 A T - ReadM SNP 0034.scaffold00131 846961 1 A C - ReadM SNP 0034.scaffold00131 846972 1 C T - ReadM SNP 0034.scaffold00131 847025 1 A C - ReadM SNP 0034.scaffold00131 847110 1 A T - ReadM SNP 0034.scaffold00131 847175 1 A C - ReadM SNP 0034.scaffold00131 847208 1 C T - ReadM SNP 0034.scaffold00131 847220 1 G A - ReadM SNP 0034.scaffold00131 847260 1 A T - ReadM SNP 0034.scaffold00131 847337 1 C A - ReadM SNP 0034.scaffold00131 847359 1 G A - Both SNP 0034.scaffold00131 847472 1 A G scaffold3138 Both SNP 0034.scaffold00131 847571 1 T C scaffold3138 Both SNP 0034.scaffold00131 847679 1 T A scaffold3138 Both SNP 0034.scaffold00131 847687 1 T C scaffold3138 ReadM SNP 0034.scaffold00131 847710 1 A C - ReadM SNP 0034.scaffold00131 847806 1 T C - ReadM SNP 0034.scaffold00131 847865 2 TT AA - ReadM SNP 0034.scaffold00131 847958 1 G T - ReadM SNP 0034.scaffold00131 847964 1 C A - ReadM SNP 0034.scaffold00131 847976 1 A T - ScafM SNP 0034.scaffold00131 848188 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 848191 1 C A scaffold3138 Both SNP 0034.scaffold00131 848253 1 T C scaffold3138 Both SNP 0034.scaffold00131 848264 1 T C scaffold3138 Both SNP 0034.scaffold00131 848287 1 C G scaffold3138 Both SNP 0034.scaffold00131 848310 1 T C scaffold3138 Both SNP 0034.scaffold00131 848380 1 T C scaffold3138 Both SNP 0034.scaffold00131 848486 1 A G scaffold3138 Both SNP 0034.scaffold00131 848522 1 T G scaffold3138 ReadM SNP 0034.scaffold00131 848624 1 T C - ReadM SNP 0034.scaffold00131 848673 1 C T - Both SNP 0034.scaffold00131 848708 1 A G scaffold3138 Both INDEL 0034.scaffold00131 848726 1 . C scaffold3138 ScafM SNP 0034.scaffold00131 848742 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 848748 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 848750 1 A G scaffold3138 ScafM SNP 0034.scaffold00131 848805 1 G C scaffold3138 ScafM SNP 0034.scaffold00131 848815 1 T G scaffold3138 ScafM SNP 0034.scaffold00131 848842 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 848847 1 A C scaffold3138 ScafM SNP 0034.scaffold00131 848850 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 848857 2 TC .. scaffold3138 ScafM SNP 0034.scaffold00131 848871 1 G T scaffold3138 ScafM SNP 0034.scaffold00131 848882 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 848884 1 T A scaffold3138 ScafM SNP 0034.scaffold00131 848887 1 T C scaffold3138 ScafM SNP 0034.scaffold00131 848893 1 A C scaffold3138 ScafM INDEL 0034.scaffold00131 848916 2 .T CC scaffold3138 ScafM SNP 0034.scaffold00131 848927 1 C T scaffold3138 ScafM SNP 0034.scaffold00131 848933 1 C G scaffold3138 ScafM SNP 0034.scaffold00131 848955 1 C A scaffold3138 ReadM SNP 0034.scaffold00131 848961 1 C T - ReadM SNP 0034.scaffold00131 848970 1 C T - ScafM SNP 0034.scaffold00131 848980 2 AA GT scaffold3138 ScafM SNP 0034.scaffold00131 848985 2 GT CG scaffold3138 ReadM SNP 0034.scaffold00131 849011 1 C G - ReadM SNP 0034.scaffold00131 849040 1 G A - ReadM SNP 0034.scaffold00131 849090 1 T C - ReadM SNP 0034.scaffold00131 849135 1 C T - ReadM SNP 0034.scaffold00131 849150 1 C T - ReadM SNP 0034.scaffold00131 849203 1 T C - ReadM SNP 0034.scaffold00131 849255 1 C A - ReadM SNP 0034.scaffold00131 849350 1 A G - ReadM SNP 0034.scaffold00131 849381 1 A G - ReadM SNP 0034.scaffold00131 849430 1 G A - ReadM SNP 0034.scaffold00131 849461 1 A G - ReadM SNP 0034.scaffold00131 849475 1 C A - ReadM SNP 0034.scaffold00131 849529 1 T C - ScafM SNP 0034.scaffold00131 850152 1 T A scaffold3138 ScafM INDEL 0034.scaffold00131 850156 1 A . scaffold3138 ScafM SNP 0034.scaffold00131 850161 1 A G scaffold3138 ScafM INDEL 0034.scaffold00131 850203 1 . A scaffold3138 ScafM SNP 0034.scaffold00131 850268 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 850308 1 G A scaffold3138 ScafM SNP 0034.scaffold00131 850311 1 A T scaffold3138 ScafM SNP 0034.scaffold00131 850347 1 A T scaffold3138 Both SNP 0034.scaffold00131 850428 1 T G scaffold3138 Both SNP 0034.scaffold00131 850448 1 A T scaffold3138 ReadM SNP 0034.scaffold00131 850501 1 C T - ReadM SNP 0034.scaffold00131 850632 1 T A - ReadM SNP 0034.scaffold00131 850670 1 A C - ReadM SNP 0034.scaffold00131 850787 1 C T - ReadM INDEL 0034.scaffold00131 850812 1 . T - ReadM SNP 0034.scaffold00131 850839 1 T C - ReadM SNP 0034.scaffold00131 850862 1 A G - ReadM SNP 0034.scaffold00131 850881 1 A C - ReadM SNP 0034.scaffold00131 850921 1 A G - ReadM SNP 0034.scaffold00131 850949 1 G A - Both SNP 0034.scaffold00131 851079 1 A G scaffold3138 Both SNP 0034.scaffold00131 851109 1 C T scaffold3138 Both SNP 0034.scaffold00131 851143 1 C G scaffold3138 ReadM INDEL 0034.scaffold00131 851264 1 T . - ReadM SNP 0034.scaffold00131 851350 1 C A - ReadM SNP 0034.scaffold00131 851418 1 T C - ReadM SNP 0034.scaffold00131 852521 1 T G - ReadM SNP 0034.scaffold00131 852548 1 A G - ReadM SNP 0034.scaffold00131 852619 1 A G - ReadM SNP 0034.scaffold00131 852645 1 A G - Both SNP 0034.scaffold00131 852725 1 C A scaffold7824 Both INDEL 0034.scaffold00131 852821 3 ... TAT scaffold7824 ReadM SNP 0034.scaffold00131 852876 1 A G - ReadM SNP 0034.scaffold00131 852911 1 G A - ReadM SNP 0034.scaffold00131 852930 1 C A - ReadM SNP 0034.scaffold00131 853019 1 C T - ReadM SNP 0034.scaffold00131 853035 1 A C - ReadM SNP 0034.scaffold00131 853072 1 A G - ReadM SNP 0034.scaffold00131 853122 1 T C - ReadM SNP 0034.scaffold00131 853151 1 A T - ReadM SNP 0034.scaffold00131 853271 1 T C - ReadM SNP 0034.scaffold00131 853293 1 T C - ReadM SNP 0034.scaffold00131 853310 1 C A - ReadM SNP 0034.scaffold00131 853374 1 A G - ReadM SNP 0034.scaffold00131 853494 1 T A - Both SNP 0034.scaffold00131 853559 1 A G scaffold7824 Both SNP 0034.scaffold00131 853606 1 T A scaffold7824 Both SNP 0034.scaffold00131 853611 1 T A scaffold7824 Both INDEL 0034.scaffold00131 853718 2 .. AA scaffold7824 ScafM SNP 0034.scaffold00131 853758 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 853766 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 853821 1 A C scaffold7824 ReadM SNP 0034.scaffold00131 854022 1 C T - ReadM SNP 0034.scaffold00131 854028 1 G A - ScafM SNP 0034.scaffold00131 854125 2 TA CT scaffold7824 ScafM SNP 0034.scaffold00131 854136 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 854138 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 854154 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 854159 1 C A scaffold7824 ScafM INDEL 0034.scaffold00131 854178 12 ............ CTCACACTCACA scaffold7824 Both INDEL 0034.scaffold00131 854224 1 C . scaffold7824 ScafM SNP 0034.scaffold00131 854250 1 C T scaffold7824 ScafM INDEL 0034.scaffold00131 854252 1 C . scaffold7824 ScafM SNP 0034.scaffold00131 854255 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 854270 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 854315 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 854322 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 854326 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 854332 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 854342 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 854350 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 854380 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 854382 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 854385 1 C T scaffold7824 ScafM INDEL 0034.scaffold00131 854448 1 . C scaffold7824 ScafM INDEL 0034.scaffold00131 854449 1 . C scaffold7824 ScafM SNP 0034.scaffold00131 854472 1 G T scaffold7824 ScafM SNP 0034.scaffold00131 854507 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 854530 1 G T scaffold7824 ReadM SNP 0034.scaffold00131 854797 1 A G - ReadM SNP 0034.scaffold00131 854829 1 T C - ReadM SNP 0034.scaffold00131 854861 1 C T - Both SNP 0034.scaffold00131 855051 1 C A scaffold7824 Both SNP 0034.scaffold00131 855057 1 C T scaffold7824 ReadM SNP 0034.scaffold00131 855315 1 C T - ReadM SNP 0034.scaffold00131 855322 1 C A - ReadM SNP 0034.scaffold00131 855430 1 G A - ReadM SNP 0034.scaffold00131 855439 1 C T - ReadM SNP 0034.scaffold00131 855450 1 T C - ReadM SNP 0034.scaffold00131 855559 1 T G - ReadM SNP 0034.scaffold00131 855666 1 T A - ReadM SNP 0034.scaffold00131 855718 1 T C - ReadM INDEL 0034.scaffold00131 855733 1 A . - ReadM SNP 0034.scaffold00131 855800 1 T C - ReadM SNP 0034.scaffold00131 855843 1 G A - ReadM SNP 0034.scaffold00131 855854 1 T G - ScafM SNP 0034.scaffold00131 856145 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 856176 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 856190 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 856203 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 856253 2 AG GA scaffold7824 ScafM SNP 0034.scaffold00131 856257 1 T C scaffold7824 ReadM SNP 0034.scaffold00131 856430 1 T A - ReadM SNP 0034.scaffold00131 856504 1 G C - ReadM SNP 0034.scaffold00131 856557 1 A C - ReadM SNP 0034.scaffold00131 856586 1 G A - ReadM SNP 0034.scaffold00131 857460 1 C T - ReadM SNP 0034.scaffold00131 857475 1 G A - ReadM SNP 0034.scaffold00131 857550 1 G A - ReadM SNP 0034.scaffold00131 857639 1 G A - ReadM SNP 0034.scaffold00131 857667 1 C G - ReadM SNP 0034.scaffold00131 857946 1 C T - ReadM SNP 0034.scaffold00131 857954 1 T C - ReadM SNP 0034.scaffold00131 858072 1 G T - ReadM SNP 0034.scaffold00131 858079 1 A T - ReadM SNP 0034.scaffold00131 858100 1 T C - ReadM SNP 0034.scaffold00131 858233 1 T C - ReadM SNP 0034.scaffold00131 858403 1 C G - ReadM SNP 0034.scaffold00131 858442 1 A G - ReadM SNP 0034.scaffold00131 858496 2 CC GG - Both SNP 0034.scaffold00131 858540 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 858581 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 858589 1 C T scaffold7824 ReadM SNP 0034.scaffold00131 858825 1 C G - ReadM SNP 0034.scaffold00131 858832 1 A G - ReadM SNP 0034.scaffold00131 858847 1 A T - ReadM SNP 0034.scaffold00131 858895 1 G A - ReadM SNP 0034.scaffold00131 858928 1 G A - ReadM SNP 0034.scaffold00131 859058 1 T C - ReadM SNP 0034.scaffold00131 859072 1 C T - ReadM SNP 0034.scaffold00131 859224 1 T C - ReadM SNP 0034.scaffold00131 859262 1 G T - ReadM SNP 0034.scaffold00131 859287 1 C T - ReadM SNP 0034.scaffold00131 859586 1 G A - ReadM SNP 0034.scaffold00131 859613 1 A T - ReadM SNP 0034.scaffold00131 859682 1 A C - ReadM SNP 0034.scaffold00131 859795 1 C T - ReadM SNP 0034.scaffold00131 859808 1 T C - ReadM SNP 0034.scaffold00131 859827 1 C T - ScafM SNP 0034.scaffold00131 860047 1 G T scaffold7824 ScafM SNP 0034.scaffold00131 860061 1 G T scaffold7824 ScafM INDEL 0034.scaffold00131 860064 1 . T scaffold7824 ScafM SNP 0034.scaffold00131 860078 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 860085 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 860098 1 A C scaffold7824 ScafM SNP 0034.scaffold00131 860106 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 860145 1 G A scaffold7824 ReadM SNP 0034.scaffold00131 860251 1 T A - ReadM SNP 0034.scaffold00131 860257 1 T A - ReadM SNP 0034.scaffold00131 860304 1 C T - ReadM SNP 0034.scaffold00131 860354 1 T G - ReadM SNP 0034.scaffold00131 860424 1 T C - ReadM SNP 0034.scaffold00131 860632 1 G A - ReadM SNP 0034.scaffold00131 860656 1 A C - ReadM SNP 0034.scaffold00131 860740 1 T G - ReadM SNP 0034.scaffold00131 860769 1 T C - ReadM SNP 0034.scaffold00131 861166 1 A C - ReadM SNP 0034.scaffold00131 861168 1 A C - ReadM SNP 0034.scaffold00131 861201 1 T A - ReadM SNP 0034.scaffold00131 861209 1 G A - ReadM SNP 0034.scaffold00131 861281 1 C T - ReadM SNP 0034.scaffold00131 861364 1 A T - ReadM SNP 0034.scaffold00131 861455 1 C A - ReadM SNP 0034.scaffold00131 861539 1 C G - ReadM SNP 0034.scaffold00131 861561 1 G C - ReadM SNP 0034.scaffold00131 861571 1 A C - ReadM SNP 0034.scaffold00131 861805 1 G A - ReadM SNP 0034.scaffold00131 861839 1 G A - ReadM SNP 0034.scaffold00131 861869 1 C T - ReadM SNP 0034.scaffold00131 861882 1 A G - ReadM SNP 0034.scaffold00131 861963 1 C T - ReadM SNP 0034.scaffold00131 862278 1 G A - ReadM SNP 0034.scaffold00131 862317 1 A G - ReadM SNP 0034.scaffold00131 862399 1 C T - ReadM INDEL 0034.scaffold00131 862419 2 .. CT - ReadM SNP 0034.scaffold00131 862472 1 G A - ReadM SNP 0034.scaffold00131 862736 1 C A - ReadM SNP 0034.scaffold00131 862783 1 A G - ReadM SNP 0034.scaffold00131 862815 1 G C - ReadM SNP 0034.scaffold00131 862862 1 A G - ReadM SNP 0034.scaffold00131 862916 1 T C - ReadM SNP 0034.scaffold00131 862924 1 C A - ReadM SNP 0034.scaffold00131 863023 1 A T - ReadM SNP 0034.scaffold00131 863123 1 T A - ReadM SNP 0034.scaffold00131 863163 1 T C - ReadM SNP 0034.scaffold00131 863232 1 T G - ReadM SNP 0034.scaffold00131 863265 1 A G - ReadM SNP 0034.scaffold00131 863367 1 C A - ReadM SNP 0034.scaffold00131 863394 1 T C - ReadM SNP 0034.scaffold00131 863422 1 T C - ReadM SNP 0034.scaffold00131 863621 1 T C - ReadM SNP 0034.scaffold00131 863658 1 G C - ReadM SNP 0034.scaffold00131 863686 1 C T - ReadM SNP 0034.scaffold00131 863864 1 G C - ReadM SNP 0034.scaffold00131 864390 1 C T - ReadM SNP 0034.scaffold00131 864471 1 A G - ReadM SNP 0034.scaffold00131 864506 1 C A - ReadM SNP 0034.scaffold00131 864575 1 C T - ScafM SNP 0034.scaffold00131 865145 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865199 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865204 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865209 1 T C scaffold7824 ScafM INDEL 0034.scaffold00131 865215 3 ... ATT scaffold7824 ScafM SNP 0034.scaffold00131 865243 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 865256 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 865277 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 865279 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 865305 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865345 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 865377 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 865384 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865407 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 865457 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 865460 1 A T scaffold7824 Both SNP 0034.scaffold00131 865494 1 G A scaffold7824 Both SNP 0034.scaffold00131 865562 1 G T scaffold7824 Both SNP 0034.scaffold00131 865949 1 G T scaffold7824 Both SNP 0034.scaffold00131 866038 1 T G scaffold7824 ScafM INDEL 0034.scaffold00131 866072 4 ATCG .... scaffold7824 ScafM SNP 0034.scaffold00131 866135 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 866138 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 872763 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 872766 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 872772 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 872882 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 872910 2 TA CG scaffold7824 ScafM SNP 0034.scaffold00131 872990 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 873018 1 G C scaffold7824 Both SNP 0034.scaffold00131 873095 1 A T scaffold7824 Both SNP 0034.scaffold00131 873130 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 873283 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 873286 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 873288 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 873297 1 A G scaffold7824 Both INDEL 0034.scaffold00131 873346 1 . C scaffold7824 Both SNP 0034.scaffold00131 873419 1 G T scaffold7824 Both SNP 0034.scaffold00131 873446 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 873474 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 873497 2 AA TT scaffold7824 ScafM SNP 0034.scaffold00131 873515 2 GG TA scaffold7824 ScafM SNP 0034.scaffold00131 873562 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 873596 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 873608 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 873617 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 873632 1 C A scaffold7824 Both SNP 0034.scaffold00131 873681 1 A G scaffold7824 Both SNP 0034.scaffold00131 873684 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 873739 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 873743 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 873747 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 873770 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 873775 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 873879 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 873897 1 G T scaffold7824 ScafM SNP 0034.scaffold00131 873902 2 TG CA scaffold7824 ScafM SNP 0034.scaffold00131 873918 1 C T scaffold7824 Both SNP 0034.scaffold00131 873974 1 G T scaffold7824 Both SNP 0034.scaffold00131 874003 1 A T scaffold7824 Both SNP 0034.scaffold00131 874040 1 A G scaffold7824 Both SNP 0034.scaffold00131 874079 1 A C scaffold7824 ScafM SNP 0034.scaffold00131 874116 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 874126 1 G A scaffold7824 ScafM INDEL 0034.scaffold00131 874128 2 CG .. scaffold7824 Both SNP 0034.scaffold00131 874187 1 G T scaffold7824 Both SNP 0034.scaffold00131 874194 1 C T scaffold7824 Both SNP 0034.scaffold00131 874207 1 G A scaffold7824 ReadM SNP 0034.scaffold00131 874320 1 G A - ReadM SNP 0034.scaffold00131 874418 1 C G - ReadM SNP 0034.scaffold00131 874433 1 C T - ReadM SNP 0034.scaffold00131 874464 1 C A - ReadM SNP 0034.scaffold00131 874580 1 G C - ReadM SNP 0034.scaffold00131 874667 1 A G - ReadM SNP 0034.scaffold00131 874748 1 A G - ReadM SNP 0034.scaffold00131 874762 1 T A - ReadM SNP 0034.scaffold00131 874855 1 C T - ReadM SNP 0034.scaffold00131 874887 1 G A - ReadM SNP 0034.scaffold00131 874951 1 C T - ReadM SNP 0034.scaffold00131 875012 1 G A - ReadM SNP 0034.scaffold00131 875437 1 T C - ReadM SNP 0034.scaffold00131 875478 1 T C - ReadM SNP 0034.scaffold00131 875649 1 C G - ReadM SNP 0034.scaffold00131 875661 1 C T - ReadM SNP 0034.scaffold00131 875811 1 A G - ReadM INDEL 0034.scaffold00131 875832 1 . G - ReadM SNP 0034.scaffold00131 875902 1 A G - ReadM INDEL 0034.scaffold00131 875950 1 . C - ReadM SNP 0034.scaffold00131 876025 1 A G - ReadM SNP 0034.scaffold00131 876036 1 C T - ReadM SNP 0034.scaffold00131 876134 1 G A - ReadM SNP 0034.scaffold00131 876147 1 G A - ReadM SNP 0034.scaffold00131 876188 1 A G - ReadM SNP 0034.scaffold00131 876222 1 C T - ReadM SNP 0034.scaffold00131 876321 1 G A - ReadM SNP 0034.scaffold00131 876610 1 C T - ReadM SNP 0034.scaffold00131 876746 1 C A - ReadM SNP 0034.scaffold00131 876789 1 G C - ReadM SNP 0034.scaffold00131 876822 1 A C - ReadM SNP 0034.scaffold00131 876923 1 T C - ReadM SNP 0034.scaffold00131 876932 1 G C - ReadM SNP 0034.scaffold00131 876993 1 G C - ReadM SNP 0034.scaffold00131 877038 1 G A - ReadM SNP 0034.scaffold00131 877043 1 C A - ReadM SNP 0034.scaffold00131 877265 1 T C - ScafM SNP 0034.scaffold00131 877380 1 G A scaffold7824 ScafM INDEL 0034.scaffold00131 877414 7 ....... ACTCTAC scaffold7824 Both SNP 0034.scaffold00131 877479 1 C T scaffold7824 Both SNP 0034.scaffold00131 877498 1 C G scaffold7824 Both SNP 0034.scaffold00131 877530 1 G C scaffold7824 Both SNP 0034.scaffold00131 877571 1 C T scaffold7824 Both INDEL 0034.scaffold00131 877671 1 . T scaffold7824 Both SNP 0034.scaffold00131 877697 1 A C scaffold7824 Both SNP 0034.scaffold00131 877733 1 G A scaffold7824 Both INDEL 0034.scaffold00131 877852 1 . T scaffold7824 ScafM SNP 0034.scaffold00131 877854 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 877902 1 C G scaffold7824 ScafM SNP 0034.scaffold00131 877914 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 877926 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 877935 1 A G scaffold7824 ReadM SNP 0034.scaffold00131 878000 1 G A - ReadM SNP 0034.scaffold00131 878042 1 C A - ReadM SNP 0034.scaffold00131 878152 1 C A - ReadM SNP 0034.scaffold00131 878289 1 T C - ReadM SNP 0034.scaffold00131 878477 1 C G - ReadM SNP 0034.scaffold00131 878520 1 A T - ReadM SNP 0034.scaffold00131 878626 1 A G - ScafM SNP 0034.scaffold00131 878726 1 T C scaffold7824 Both SNP 0034.scaffold00131 878741 1 C T scaffold7824 Both SNP 0034.scaffold00131 878791 1 C A scaffold7824 Both INDEL 0034.scaffold00131 878801 1 T . scaffold7824 ScafM SNP 0034.scaffold00131 878863 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 878868 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 878872 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 878885 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 878894 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 878925 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 878931 1 C G scaffold7824 ScafM SNP 0034.scaffold00131 878959 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 878992 1 G T scaffold7824 ScafM SNP 0034.scaffold00131 879031 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 879045 1 C T scaffold7824 Both SNP 0034.scaffold00131 879057 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 879072 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 879118 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 879160 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 879168 1 C G scaffold7824 ScafM SNP 0034.scaffold00131 879174 1 A T scaffold7824 ScafM SNP 0034.scaffold00131 879991 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 879997 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 880003 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 880008 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 880017 1 G C scaffold7824 ScafM SNP 0034.scaffold00131 880028 1 C G scaffold7824 ScafM SNP 0034.scaffold00131 880030 1 A C scaffold7824 ScafM SNP 0034.scaffold00131 880033 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 880059 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 880063 1 C G scaffold7824 ScafM SNP 0034.scaffold00131 880065 1 T A scaffold7824 ScafM SNP 0034.scaffold00131 880074 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 880102 1 C A scaffold7824 ScafM SNP 0034.scaffold00131 880105 1 T G scaffold7824 ScafM INDEL 0034.scaffold00131 880129 2 .G CA scaffold7824 ScafM SNP 0034.scaffold00131 880135 1 G A scaffold7824 ScafM SNP 0034.scaffold00131 880138 2 GC CG scaffold7824 ScafM SNP 0034.scaffold00131 880146 1 C G scaffold7824 ScafM INDEL 0034.scaffold00131 880154 2 .T CA scaffold7824 ScafM SNP 0034.scaffold00131 880180 1 T G scaffold7824 ScafM INDEL 0034.scaffold00131 880207 1 . C scaffold7824 ScafM SNP 0034.scaffold00131 880210 1 T G scaffold7824 ScafM SNP 0034.scaffold00131 880273 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 880279 1 C A scaffold7824 ScafM INDEL 0034.scaffold00131 880282 1 . A scaffold7824 ScafM SNP 0034.scaffold00131 880302 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 880307 1 G C scaffold7824 Both SNP 0034.scaffold00131 880524 1 T C scaffold7824 Both SNP 0034.scaffold00131 880567 1 G C scaffold7824 Both SNP 0034.scaffold00131 880587 1 C T scaffold7824 ScafM SNP 0034.scaffold00131 880606 1 G T scaffold7824 ScafM SNP 0034.scaffold00131 880619 1 G A scaffold7824 Both SNP 0034.scaffold00131 880650 1 T C scaffold7824 Both SNP 0034.scaffold00131 880653 1 G A scaffold7824 Both SNP 0034.scaffold00131 880685 1 T A scaffold7824 Both SNP 0034.scaffold00131 880768 1 C T scaffold7824 Both SNP 0034.scaffold00131 880772 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 880817 2 TC AT scaffold7824 ScafM SNP 0034.scaffold00131 880845 1 C T scaffold7824 Both SNP 0034.scaffold00131 880856 1 G A scaffold7824 Both SNP 0034.scaffold00131 880884 1 T C scaffold7824 Both SNP 0034.scaffold00131 880948 1 T A scaffold7824 Both SNP 0034.scaffold00131 880955 1 G C scaffold7824 Both SNP 0034.scaffold00131 881012 1 G T scaffold7824 Both SNP 0034.scaffold00131 881066 1 T C scaffold7824 ScafM SNP 0034.scaffold00131 881089 1 G C scaffold7824 Both SNP 0034.scaffold00131 881108 1 C T scaffold7824 Both SNP 0034.scaffold00131 881176 1 A G scaffold7824 Both SNP 0034.scaffold00131 881248 1 G A scaffold7824 Both SNP 0034.scaffold00131 881270 1 A T scaffold7824 Both SNP 0034.scaffold00131 881285 1 A T scaffold7824 Both SNP 0034.scaffold00131 881319 1 A T scaffold7824 Both SNP 0034.scaffold00131 881325 1 T C scaffold7824 Both SNP 0034.scaffold00131 881387 1 A G scaffold7824 Both SNP 0034.scaffold00131 881411 1 G A scaffold7824 Both SNP 0034.scaffold00131 881466 1 G A scaffold7824 Both SNP 0034.scaffold00131 881472 1 T A scaffold7824 Both SNP 0034.scaffold00131 881613 1 G T scaffold7824 Both SNP 0034.scaffold00131 881632 1 G A scaffold7824 ScafM INDEL 0034.scaffold00131 881657 3 ... AAT scaffold7824 Both SNP 0034.scaffold00131 881775 1 C T scaffold7824 Both SNP 0034.scaffold00131 881822 1 A G scaffold7824 ScafM SNP 0034.scaffold00131 881828 1 C A scaffold7824 ReadM INDEL 0034.scaffold00131 881902 3 AAC ... - Both SNP 0034.scaffold00131 882097 1 T C scaffold7824 Both SNP 0034.scaffold00131 882114 1 C T scaffold7824 ReadM SNP 0034.scaffold00131 882347 1 C T - ReadM SNP 0034.scaffold00131 882376 1 G T - ReadM SNP 0034.scaffold00131 882397 1 T G - ReadM SNP 0034.scaffold00131 882457 1 C T - ReadM INDEL 0034.scaffold00131 882495 1 T . - ReadM SNP 0034.scaffold00131 882590 1 T C - ReadM SNP 0034.scaffold00131 882616 1 A T - ReadM SNP 0034.scaffold00131 882660 1 A C - ReadM SNP 0034.scaffold00131 882670 1 T C - ReadM SNP 0034.scaffold00131 882707 1 C T - ReadM SNP 0034.scaffold00131 882727 1 T A - ReadM SNP 0034.scaffold00131 882808 1 T C - ReadM SNP 0034.scaffold00131 882831 1 T C - ScafM SNP 0034.scaffold00131 886850 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 886861 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 886866 1 T A scaffold10280 ScafM INDEL 0034.scaffold00131 886870 1 G . scaffold10280 ScafM SNP 0034.scaffold00131 886880 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 886890 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 886893 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 886900 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 886911 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 886915 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 886928 1 T A scaffold10280 ScafM SNP 0034.scaffold00131 886930 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 886933 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 886947 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 886949 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 886956 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 886958 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 886961 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 886966 1 G C scaffold10280 ScafM SNP 0034.scaffold00131 886969 2 TA CC scaffold10280 ScafM SNP 0034.scaffold00131 886973 1 G T scaffold10280 ScafM SNP 0034.scaffold00131 886986 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 886995 1 G C scaffold10280 ScafM SNP 0034.scaffold00131 886998 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887003 1 A T scaffold10280 ScafM SNP 0034.scaffold00131 887023 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887035 1 A T scaffold10280 ScafM SNP 0034.scaffold00131 887040 1 C G scaffold10280 ScafM SNP 0034.scaffold00131 887044 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887053 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 887057 2 TT AG scaffold10280 ScafM SNP 0034.scaffold00131 887066 1 G C scaffold10280 ScafM SNP 0034.scaffold00131 887068 2 CA TC scaffold10280 ScafM SNP 0034.scaffold00131 887077 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887095 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887099 2 CT AC scaffold10280 ScafM SNP 0034.scaffold00131 887105 1 T A scaffold10280 ScafM SNP 0034.scaffold00131 887109 1 A T scaffold10280 ScafM SNP 0034.scaffold00131 887120 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887129 4 CCTA TTGG scaffold10280 ScafM SNP 0034.scaffold00131 887135 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887137 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887144 2 AC GA scaffold10280 ScafM SNP 0034.scaffold00131 887147 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887164 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 887169 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887171 1 T C scaffold10280 ScafM INDEL 0034.scaffold00131 887193 1 . C scaffold10280 ScafM INDEL 0034.scaffold00131 887198 1 T . scaffold10280 ScafM SNP 0034.scaffold00131 887206 2 AG TT scaffold10280 ScafM SNP 0034.scaffold00131 887213 2 AT GC scaffold10280 ScafM SNP 0034.scaffold00131 887220 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887231 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887243 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887246 1 G C scaffold10280 ScafM SNP 0034.scaffold00131 887251 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887261 2 TT CC scaffold10280 ScafM SNP 0034.scaffold00131 887273 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 887279 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887284 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 887288 2 TT CG scaffold10280 ScafM SNP 0034.scaffold00131 887291 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887302 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887307 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887309 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887315 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887321 1 T A scaffold10280 ScafM SNP 0034.scaffold00131 887327 2 TT AC scaffold10280 ScafM SNP 0034.scaffold00131 887333 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887335 1 T C scaffold10280 ScafM INDEL 0034.scaffold00131 887342 2 TT .. scaffold10280 ScafM SNP 0034.scaffold00131 887346 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887360 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887362 1 G A scaffold10280 ScafM INDEL 0034.scaffold00131 887365 1 . G scaffold10280 ScafM INDEL 0034.scaffold00131 887368 3 ... ATA scaffold10280 ScafM SNP 0034.scaffold00131 887385 2 TG AC scaffold10280 ScafM SNP 0034.scaffold00131 887388 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 887392 1 T A scaffold10280 ScafM INDEL 0034.scaffold00131 887398 6 ...... CTCGAA scaffold10280 ScafM INDEL 0034.scaffold00131 887400 1 . T scaffold10280 ScafM SNP 0034.scaffold00131 887406 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887413 1 A T scaffold10280 ScafM SNP 0034.scaffold00131 887417 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887419 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887442 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 887452 1 C G scaffold10280 ScafM SNP 0034.scaffold00131 887454 3 GAT AGC scaffold10280 ScafM SNP 0034.scaffold00131 887461 1 G C scaffold10280 ScafM SNP 0034.scaffold00131 887464 4 AATT TGCC scaffold10280 ScafM SNP 0034.scaffold00131 887473 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887475 1 A C scaffold10280 ScafM SNP 0034.scaffold00131 887484 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887489 1 T G scaffold10280 ScafM SNP 0034.scaffold00131 887493 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887499 1 G A scaffold10280 ScafM INDEL 0034.scaffold00131 887502 1 T . scaffold10280 ScafM SNP 0034.scaffold00131 887505 1 T A scaffold10280 ScafM INDEL 0034.scaffold00131 887509 1 . A scaffold10280 ScafM SNP 0034.scaffold00131 887521 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887523 2 CA AT scaffold10280 ScafM SNP 0034.scaffold00131 887530 2 AA GC scaffold10280 ScafM SNP 0034.scaffold00131 887534 1 C G scaffold10280 ScafM SNP 0034.scaffold00131 887536 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887539 1 A G scaffold10280 ScafM INDEL 0034.scaffold00131 887541 1 . C scaffold10280 ScafM SNP 0034.scaffold00131 887543 2 GT AC scaffold10280 ScafM SNP 0034.scaffold00131 887553 1 T C scaffold10280 ScafM SNP 0034.scaffold00131 887560 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 887563 1 A G scaffold10280 ScafM SNP 0034.scaffold00131 887566 1 C A scaffold10280 ScafM SNP 0034.scaffold00131 887570 1 G A scaffold10280 ScafM SNP 0034.scaffold00131 887572 1 C T scaffold10280 ScafM SNP 0034.scaffold00131 887716 1 T C scaffold5110 ScafM SNP 0034.scaffold00131 887718 1 G A scaffold5110 ScafM SNP 0034.scaffold00131 887727 1 T G scaffold5110 ScafM SNP 0034.scaffold00131 887732 1 C T scaffold5110 ScafM SNP 0034.scaffold00131 887746 1 T C scaffold5110 ScafM SNP 0034.scaffold00131 887753 2 TT CA scaffold5110 ScafM SNP 0034.scaffold00131 887758 2 GC AG scaffold5110 ScafM SNP 0034.scaffold00131 887761 1 A C scaffold5110 ScafM SNP 0034.scaffold00131 887766 2 TA GG scaffold5110 ScafM SNP 0034.scaffold00131 887771 1 G C scaffold5110 ScafM SNP 0034.scaffold00131 887773 1 G T scaffold5110 ScafM SNP 0034.scaffold00131 887790 1 G A scaffold5110 ScafM SNP 0034.scaffold00131 887794 1 T C scaffold5110 ScafM SNP 0034.scaffold00131 887815 1 C T scaffold5110 ScafM SNP 0034.scaffold00131 887817 1 G C scaffold5110 ScafM INDEL 0034.scaffold00131 887822 1 A . scaffold5110 ScafM SNP 0034.scaffold00131 887827 1 T C scaffold5110 ScafM INDEL 0034.scaffold00131 887835 1 T . scaffold5110 ScafM SNP 0034.scaffold00131 887841 1 A C scaffold5110 ScafM INDEL 0034.scaffold00131 887852 2 .. AT scaffold5110 ScafM INDEL 0034.scaffold00131 887854 4 .... TTTT scaffold5110 ScafM INDEL 0034.scaffold00131 887856 7 ....... GCGTTTG scaffold5110 ScafM INDEL 0034.scaffold00131 887858 7 ....... AACATGT scaffold5110 ScafM SNP 0034.scaffold00131 887866 1 T G scaffold5110 ScafM SNP 0034.scaffold00131 887876 1 A G scaffold5110 ScafM SNP 0034.scaffold00131 887879 1 G C scaffold5110 ScafM SNP 0034.scaffold00131 887881 1 G T scaffold5110 ScafM SNP 0034.scaffold00131 887883 1 A G scaffold5110 ScafM SNP 0034.scaffold00131 887886 1 C A scaffold5110 ScafM SNP 0034.scaffold00131 887890 2 AA CT scaffold5110 ScafM SNP 0034.scaffold00131 887900 2 AC GT scaffold5110 ScafM SNP 0034.scaffold00131 887905 1 T C scaffold5110 ScafM SNP 0034.scaffold00131 887928 2 AA TG scaffold5110 ScafM SNP 0034.scaffold00131 895327 1 T C scaffold19443 ScafM SNP 0034.scaffold00131 895861 1 T A scaffold19443 ScafM SNP 0034.scaffold00131 895872 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 895894 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 895949 2 TT CG scaffold19443 ScafM SNP 0034.scaffold00131 895961 1 T C scaffold19443 ScafM SNP 0034.scaffold00131 895971 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 895983 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 896025 1 A C scaffold19443 ReadM SNP 0034.scaffold00131 896208 1 G A - ReadM SNP 0034.scaffold00131 896237 1 G A - ReadM SNP 0034.scaffold00131 896518 1 C A - ReadM SNP 0034.scaffold00131 896614 1 T A - ReadM SNP 0034.scaffold00131 896623 1 G A - ReadM SNP 0034.scaffold00131 896629 1 T C - ScafM SNP 0034.scaffold00131 896737 1 C A scaffold19443 ScafM SNP 0034.scaffold00131 896759 1 A G scaffold19443 Both SNP 0034.scaffold00131 896799 1 A C scaffold19443 Both SNP 0034.scaffold00131 896822 1 T C scaffold19443 Both SNP 0034.scaffold00131 896826 1 A G scaffold19443 Both SNP 0034.scaffold00131 896886 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 896939 1 A T scaffold19443 Both SNP 0034.scaffold00131 896993 1 A G scaffold19443 Both SNP 0034.scaffold00131 897020 1 C T scaffold19443 Both SNP 0034.scaffold00131 897048 1 A G scaffold19443 ScafM INDEL 0034.scaffold00131 897066 49 ................................................. GTGTGGCGTTGCTTCAAATTTGTATCATTACTTAAGATTTCATAGAAAA scaffold19443 Both SNP 0034.scaffold00131 897107 1 A C scaffold19443 Both SNP 0034.scaffold00131 897116 1 T G scaffold19443 Both SNP 0034.scaffold00131 897209 1 G A scaffold19443 Both SNP 0034.scaffold00131 897240 1 G A scaffold19443 Both SNP 0034.scaffold00131 897263 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 897293 1 T C scaffold19443 ScafM SNP 0034.scaffold00131 897307 1 A C scaffold19443 ScafM SNP 0034.scaffold00131 897337 1 G A scaffold19443 ScafM SNP 0034.scaffold00131 897348 1 A C scaffold19443 ScafM SNP 0034.scaffold00131 897358 1 C T scaffold19443 Both SNP 0034.scaffold00131 897395 1 G A scaffold19443 Both SNP 0034.scaffold00131 897417 1 C T scaffold19443 Both SNP 0034.scaffold00131 897485 1 T C scaffold19443 ScafM SNP 0034.scaffold00131 897530 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 897544 1 A C scaffold19443 ScafM SNP 0034.scaffold00131 897546 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 897556 1 A G scaffold19443 ReadM SNP 0034.scaffold00131 899316 1 T A - ReadM SNP 0034.scaffold00131 899324 1 A G - ReadM SNP 0034.scaffold00131 899780 1 G A - ReadM SNP 0034.scaffold00131 899809 1 A G - ReadM SNP 0034.scaffold00131 900031 1 G A - ReadM SNP 0034.scaffold00131 900047 1 A C - ReadM SNP 0034.scaffold00131 900098 1 G T - ReadM SNP 0034.scaffold00131 900183 1 G T - ReadM SNP 0034.scaffold00131 900310 1 C T - ReadM SNP 0034.scaffold00131 900483 1 T C - ReadM SNP 0034.scaffold00131 900545 1 T C - ReadM SNP 0034.scaffold00131 900574 1 C T - ReadM SNP 0034.scaffold00131 900667 1 T C - ReadM SNP 0034.scaffold00131 900753 1 G A - ReadM SNP 0034.scaffold00131 900769 1 C T - ReadM SNP 0034.scaffold00131 901101 1 T A - ReadM SNP 0034.scaffold00131 901108 1 T A - ReadM SNP 0034.scaffold00131 902070 1 C T - ReadM SNP 0034.scaffold00131 910726 1 G C - ReadM SNP 0034.scaffold00131 910763 1 G A - ReadM SNP 0034.scaffold00131 911279 1 G A - ReadM SNP 0034.scaffold00131 911411 1 A G - ReadM SNP 0034.scaffold00131 911496 1 G A - ReadM SNP 0034.scaffold00131 911748 1 A T - ReadM SNP 0034.scaffold00131 911782 1 A G - ReadM SNP 0034.scaffold00131 911900 1 C G - ReadM SNP 0034.scaffold00131 911911 1 A C - ReadM SNP 0034.scaffold00131 912029 1 T C - ReadM SNP 0034.scaffold00131 912091 1 G A - ReadM SNP 0034.scaffold00131 912138 1 C T - ReadM SNP 0034.scaffold00131 912226 1 T C - ReadM SNP 0034.scaffold00131 912233 1 A G - ReadM SNP 0034.scaffold00131 912242 1 A G - ReadM SNP 0034.scaffold00131 912335 1 A G - ReadM SNP 0034.scaffold00131 912392 1 T G - ReadM SNP 0034.scaffold00131 912406 1 A G - ReadM SNP 0034.scaffold00131 912465 1 A G - ReadM SNP 0034.scaffold00131 912498 1 T G - ReadM SNP 0034.scaffold00131 912513 1 G T - ReadM SNP 0034.scaffold00131 912573 1 A G - ReadM SNP 0034.scaffold00131 912698 1 A G - ReadM SNP 0034.scaffold00131 912736 1 G C - ReadM SNP 0034.scaffold00131 912976 1 T C - ReadM SNP 0034.scaffold00131 913073 1 G A - ReadM SNP 0034.scaffold00131 913104 1 C T - ReadM SNP 0034.scaffold00131 913118 1 T A - ReadM SNP 0034.scaffold00131 913140 1 T C - ReadM SNP 0034.scaffold00131 913182 1 G A - ReadM SNP 0034.scaffold00131 913240 2 CA TG - ReadM SNP 0034.scaffold00131 913476 1 A G - ReadM SNP 0034.scaffold00131 913480 1 A G - ReadM SNP 0034.scaffold00131 913494 1 C G - ReadM SNP 0034.scaffold00131 913570 1 T C - ReadM INDEL 0034.scaffold00131 913655 1 T . - ReadM SNP 0034.scaffold00131 913697 2 GG TT - ReadM SNP 0034.scaffold00131 913733 1 A C - ScafM INDEL 0034.scaffold00131 914310 2 .. AA scaffold19443 ScafM INDEL 0034.scaffold00131 914312 6 ...... GAACAA scaffold19443 ScafM INDEL 0034.scaffold00131 914313 1 . G scaffold19443 ScafM INDEL 0034.scaffold00131 914342 1 T . scaffold19443 ScafM SNP 0034.scaffold00131 914374 1 A C scaffold19443 ScafM SNP 0034.scaffold00131 914382 2 TT CC scaffold19443 ScafM SNP 0034.scaffold00131 914386 1 A T scaffold19443 ScafM SNP 0034.scaffold00131 914419 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 914427 1 G T scaffold19443 ScafM SNP 0034.scaffold00131 914468 1 T A scaffold19443 ScafM SNP 0034.scaffold00131 914471 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 914475 1 T C scaffold19443 ScafM SNP 0034.scaffold00131 914484 1 A T scaffold19443 ScafM INDEL 0034.scaffold00131 914530 29 GAGACCTTGCGCGTCATGAGCCACCCTCG ............................. scaffold19443 ScafM INDEL 0034.scaffold00131 914560 2 CG .. scaffold19443 ScafM INDEL 0034.scaffold00131 914563 4 GGTC .... scaffold19443 ScafM INDEL 0034.scaffold00131 914569 2 GG .. scaffold19443 ScafM SNP 0034.scaffold00131 914597 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 914633 1 G C scaffold19443 ScafM SNP 0034.scaffold00131 914641 2 GT AC scaffold19443 ScafM SNP 0034.scaffold00131 914700 1 A G scaffold19443 Both SNP 0034.scaffold00131 914725 1 C T scaffold19443 ScafM SNP 0034.scaffold00131 914776 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 914782 1 G A scaffold19443 ScafM SNP 0034.scaffold00131 914814 1 A G scaffold19443 ScafM SNP 0034.scaffold00131 914825 1 T C scaffold19443 ScafM INDEL 0034.scaffold00131 914896 1 G . scaffold19443 ScafM SNP 0034.scaffold00131 914921 1 T A scaffold19443 ReadM SNP 0034.scaffold00131 916938 1 T G - ReadM SNP 0034.scaffold00131 916975 1 C T - ReadM SNP 0034.scaffold00131 917080 1 A G - ReadM SNP 0034.scaffold00131 917158 1 A C - ReadM SNP 0034.scaffold00131 918095 1 T C - ReadM SNP 0034.scaffold00131 918560 1 C T - ReadM SNP 0034.scaffold00131 918661 1 A C - ReadM SNP 0034.scaffold00131 918671 1 G C - ReadM SNP 0034.scaffold00131 918687 1 C T - ReadM SNP 0034.scaffold00131 918924 1 C A - ReadM SNP 0034.scaffold00131 919062 1 C T - ReadM SNP 0034.scaffold00131 934179 1 T A - ReadM SNP 0034.scaffold00131 934263 1 A G - ReadM SNP 0034.scaffold00131 934324 1 A T - ReadM INDEL 0034.scaffold00131 934633 1 A . - ReadM SNP 0034.scaffold00131 934711 1 G T - ReadM SNP 0034.scaffold00131 935151 1 T G - ReadM SNP 0034.scaffold00131 935158 1 A T - ReadM SNP 0034.scaffold00131 935221 1 G A - ReadM SNP 0034.scaffold00131 935260 1 A G - ReadM SNP 0034.scaffold00131 935705 1 T C - ReadM SNP 0034.scaffold00131 935926 1 A T - ReadM SNP 0034.scaffold00131 935934 1 G A - ScafM SNP 0034.scaffold00131 939117 1 T C scaffold20587 ScafM SNP 0034.scaffold00131 939141 1 A T scaffold20587 ScafM SNP 0034.scaffold00131 940746 1 G A scaffold11444 ScafM SNP 0034.scaffold00131 940752 1 A G scaffold11444 ScafM SNP 0034.scaffold00131 940759 1 A G scaffold11444 ScafM SNP 0034.scaffold00131 940765 1 G A scaffold11444 ScafM SNP 0034.scaffold00131 940867 1 T C scaffold11444 ScafM SNP 0034.scaffold00131 940900 1 G C scaffold11444 ReadM SNP 0034.scaffold00131 946253 1 C T - ReadM SNP 0034.scaffold00131 946274 1 G A - Both SNP 0034.scaffold00131 946315 1 T G scaffold16233 Both SNP 0034.scaffold00131 946334 1 C G scaffold16233 Both SNP 0034.scaffold00131 946364 1 G A scaffold16233 ScafM SNP 0034.scaffold00131 946383 1 A C scaffold16233 ScafM SNP 0034.scaffold00131 946815 2 TT GA scaffold16233 ScafM INDEL 0034.scaffold00131 946818 1 . G scaffold16233 ScafM SNP 0034.scaffold00131 946916 1 A G scaffold16233 ScafM SNP 0034.scaffold00131 946951 1 C A scaffold16233 ScafM SNP 0034.scaffold00131 946960 1 C A scaffold16233 ReadM SNP 0034.scaffold00131 948219 1 G A - ReadM SNP 0034.scaffold00131 948224 1 A C - ReadM SNP 0034.scaffold00131 948487 1 G T - ReadM SNP 0034.scaffold00131 948790 1 A T - ReadM SNP 0034.scaffold00131 948823 1 C T - ReadM SNP 0034.scaffold00131 948897 1 C T - ReadM SNP 0034.scaffold00131 949107 1 G A - ReadM INDEL 0034.scaffold00131 949131 1 . T - ReadM SNP 0034.scaffold00131 949169 1 T C - Both INDEL 0034.scaffold00131 949238 1 . A scaffold16233 Both SNP 0034.scaffold00131 949247 1 C A scaffold16233 Both SNP 0034.scaffold00131 949339 1 C A scaffold16233 ReadM SNP 0034.scaffold00131 950076 1 T C - ReadM SNP 0034.scaffold00131 950119 1 G A - ReadM SNP 0034.scaffold00131 950139 1 G A - ReadM SNP 0034.scaffold00131 950448 1 T A - ReadM SNP 0034.scaffold00131 950456 1 C A - ReadM SNP 0034.scaffold00131 950852 1 C T - ReadM SNP 0034.scaffold00131 950900 1 G A - ReadM SNP 0034.scaffold00131 950955 1 T A - ReadM SNP 0034.scaffold00131 951089 1 T G - ReadM SNP 0034.scaffold00131 951315 1 C T - ReadM SNP 0034.scaffold00131 951333 1 G A - ReadM SNP 0034.scaffold00131 951426 1 A T - ReadM SNP 0034.scaffold00131 951738 1 G A - ReadM SNP 0034.scaffold00131 951814 1 T C - ReadM SNP 0034.scaffold00131 952031 1 G C - ReadM SNP 0034.scaffold00131 952357 1 G A - ReadM SNP 0034.scaffold00131 952381 1 A T - ReadM SNP 0034.scaffold00131 952483 1 G A - ReadM SNP 0034.scaffold00131 952512 1 G A - ReadM SNP 0034.scaffold00131 952547 1 A G - ReadM SNP 0034.scaffold00131 952614 1 G T - ReadM SNP 0034.scaffold00131 952650 1 A G - ReadM SNP 0034.scaffold00131 952705 1 A G - ReadM SNP 0034.scaffold00131 952722 1 G A - ReadM SNP 0034.scaffold00131 952880 1 C T - ReadM SNP 0034.scaffold00131 953044 1 A G - ReadM SNP 0034.scaffold00131 953061 1 A C - ReadM SNP 0034.scaffold00131 953072 1 C G - ReadM SNP 0034.scaffold00131 953161 1 C A - ReadM INDEL 0034.scaffold00131 953380 3 ... GAG - ReadM SNP 0034.scaffold00131 953505 1 G A - ReadM SNP 0034.scaffold00131 953546 1 T C - ReadM SNP 0034.scaffold00131 953824 1 T A - ReadM SNP 0034.scaffold00131 953854 1 G A - ReadM SNP 0034.scaffold00131 953915 1 A G - ReadM SNP 0034.scaffold00131 953958 1 A G - ReadM SNP 0034.scaffold00131 954073 1 A G - ReadM SNP 0034.scaffold00131 954185 1 A C - ReadM SNP 0034.scaffold00131 954203 1 C T - ReadM SNP 0034.scaffold00131 954399 1 C G - ReadM SNP 0034.scaffold00131 954473 1 T C - ReadM SNP 0034.scaffold00131 954605 1 G A - ReadM SNP 0034.scaffold00131 955248 1 A C - ReadM SNP 0034.scaffold00131 955450 1 G C - ReadM SNP 0034.scaffold00131 955606 1 G A - ReadM SNP 0034.scaffold00131 955730 1 T C - ReadM SNP 0034.scaffold00131 955847 1 T A - ReadM SNP 0034.scaffold00131 955947 1 T C - ReadM INDEL 0034.scaffold00131 956029 1 . A - ReadM SNP 0034.scaffold00131 956133 1 G A - ReadM INDEL 0034.scaffold00131 956372 1 G . - ReadM SNP 0034.scaffold00131 956468 1 T C - ReadM SNP 0034.scaffold00131 956517 1 G A - ReadM SNP 0034.scaffold00131 956572 1 T A - ReadM SNP 0034.scaffold00131 956777 1 A G - ReadM SNP 0034.scaffold00131 956795 1 T C - ReadM SNP 0034.scaffold00131 956819 1 G C - ReadM SNP 0034.scaffold00131 956854 1 T A - ReadM SNP 0034.scaffold00131 956914 1 T C - ReadM INDEL 0034.scaffold00131 957064 3 TTA ... - ReadM SNP 0034.scaffold00131 957302 1 G A - ReadM SNP 0034.scaffold00131 957372 1 A G - ReadM SNP 0034.scaffold00131 957390 1 T C - ReadM SNP 0034.scaffold00131 957439 1 C T - ReadM SNP 0034.scaffold00131 957468 1 T C - ReadM SNP 0034.scaffold00131 957481 1 C T - ReadM SNP 0034.scaffold00131 957562 1 C A - ReadM SNP 0034.scaffold00131 957565 1 T A - ReadM INDEL 0034.scaffold00131 957636 2 AA .. - ReadM SNP 0034.scaffold00131 957748 1 C T - ReadM SNP 0034.scaffold00131 958116 1 G T - ReadM SNP 0034.scaffold00131 958166 1 T G - ReadM SNP 0034.scaffold00131 958229 1 T C - ReadM SNP 0034.scaffold00131 958264 1 G T - ReadM SNP 0034.scaffold00131 958707 1 T C - ReadM SNP 0034.scaffold00131 959083 1 T G - ReadM SNP 0034.scaffold00131 959097 1 G A - ReadM SNP 0034.scaffold00131 959112 1 A T - ReadM SNP 0034.scaffold00131 959205 1 C T - ReadM SNP 0034.scaffold00131 959245 1 T C - ReadM INDEL 0034.scaffold00131 959381 1 T . - Both SNP 0034.scaffold00131 959554 1 A G scaffold16233 Both SNP 0034.scaffold00131 959675 1 T G scaffold16233 ReadM SNP 0034.scaffold00131 959748 1 G A - ReadM SNP 0034.scaffold00131 960015 1 G T - ReadM SNP 0034.scaffold00131 960062 1 T C - ReadM SNP 0034.scaffold00131 960357 1 G T - ReadM SNP 0034.scaffold00131 960376 1 A C - ReadM SNP 0034.scaffold00131 960689 1 T C - ReadM SNP 0034.scaffold00131 960758 1 A C - ReadM SNP 0034.scaffold00131 960901 1 G A - ReadM SNP 0034.scaffold00131 960930 1 C T - ReadM SNP 0034.scaffold00131 961227 1 A C - ReadM SNP 0034.scaffold00131 961479 1 G A - ReadM SNP 0034.scaffold00131 961603 1 T G - ReadM SNP 0034.scaffold00131 961631 1 A G - ReadM SNP 0034.scaffold00131 961934 1 A C - Both SNP 0034.scaffold00131 962072 1 A G scaffold16233 ReadM SNP 0034.scaffold00131 962203 1 T C - ReadM SNP 0034.scaffold00131 962339 1 G A - Both SNP 0034.scaffold00131 962597 1 T A scaffold16233 Both SNP 0034.scaffold00131 962662 1 G C scaffold16233 ScafM SNP 0034.scaffold00131 962897 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 962980 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 963025 2 GA AG scaffold16233 Both SNP 0034.scaffold00131 963073 1 T G scaffold16233 Both SNP 0034.scaffold00131 963282 1 C A scaffold16233 ScafM SNP 0034.scaffold00131 963403 1 A C scaffold16233 Both SNP 0034.scaffold00131 963438 1 C G scaffold16233 Both INDEL 0034.scaffold00131 964057 1 G . scaffold16233 Both SNP 0034.scaffold00131 964064 1 A G scaffold16233 ScafM SNP 0034.scaffold00131 964509 1 G T scaffold16233 ScafM INDEL 0034.scaffold00131 964544 1 . G scaffold16233 ScafM SNP 0034.scaffold00131 964551 1 G A scaffold16233 Both SNP 0034.scaffold00131 964582 1 T C scaffold16233 ScafM SNP 0034.scaffold00131 964635 1 A G scaffold16233 ScafM SNP 0034.scaffold00131 964677 1 T A scaffold16233 ScafM SNP 0034.scaffold00131 964686 6 TTTTTT AAAAAA scaffold16233 ScafM SNP 0034.scaffold00131 964783 1 G A scaffold16233 ScafM INDEL 0034.scaffold00131 965415 1 . A scaffold16233 ReadM INDEL 0034.scaffold00131 965421 1 . T - Both SNP 0034.scaffold00131 965540 1 A G scaffold16233 Both SNP 0034.scaffold00131 965580 1 A G scaffold16233 Both SNP 0034.scaffold00131 965584 1 G T scaffold16233 Both SNP 0034.scaffold00131 965726 1 C T scaffold16233 ReadM INDEL 0034.scaffold00131 965871 1 . A - ReadM SNP 0034.scaffold00131 965893 1 G A - ReadM INDEL 0034.scaffold00131 966022 1 . T - ReadM SNP 0034.scaffold00131 966333 1 C T - ReadM SNP 0034.scaffold00131 966357 1 G A - ReadM SNP 0034.scaffold00131 966441 1 G A - ReadM SNP 0034.scaffold00131 967300 1 C G - ReadM SNP 0034.scaffold00131 967326 1 A G - ReadM SNP 0034.scaffold00131 967338 1 C A - ReadM SNP 0034.scaffold00131 967394 1 G C - ReadM SNP 0034.scaffold00131 967510 1 T C - ReadM SNP 0034.scaffold00131 967658 1 C A - ReadM SNP 0034.scaffold00131 967793 1 C T - ReadM SNP 0034.scaffold00131 967857 1 C T - ReadM SNP 0034.scaffold00131 967927 1 C G - ScafM SNP 0034.scaffold00131 967998 1 C T scaffold16233 Both SNP 0034.scaffold00131 968055 1 C T scaffold16233 Both SNP 0034.scaffold00131 968372 1 A G scaffold16233 Both SNP 0034.scaffold00131 968503 1 G A scaffold16233 Both SNP 0034.scaffold00131 968546 1 G A scaffold16233 Both INDEL 0034.scaffold00131 968661 2 TT .. scaffold16233 Both SNP 0034.scaffold00131 968725 1 T C scaffold16233 Both SNP 0034.scaffold00131 968771 1 A T scaffold16233 Both SNP 0034.scaffold00131 968774 1 T A scaffold16233 Both SNP 0034.scaffold00131 968839 1 A G scaffold16233 Both SNP 0034.scaffold00131 969402 1 C T scaffold16233 Both INDEL 0034.scaffold00131 969473 1 . A scaffold16233 Both SNP 0034.scaffold00131 969484 1 T G scaffold16233 Both SNP 0034.scaffold00131 969975 1 A T scaffold16233 Both SNP 0034.scaffold00131 970031 1 T C scaffold16233 ScafM SNP 0034.scaffold00131 970185 1 G A scaffold16233 Both SNP 0034.scaffold00131 970197 1 A G scaffold16233 Both SNP 0034.scaffold00131 970204 1 T A scaffold16233 Both SNP 0034.scaffold00131 970233 1 A T scaffold16233 Both SNP 0034.scaffold00131 970332 1 G A scaffold16233 Both SNP 0034.scaffold00131 970495 1 A G scaffold16233 Both SNP 0034.scaffold00131 970563 1 C G scaffold16233 Both SNP 0034.scaffold00131 970599 1 C G scaffold16233 ScafM INDEL 0034.scaffold00131 970669 6 ....AA TTTTTT scaffold16233 ScafM SNP 0034.scaffold00131 970673 4 AAAA TTTT scaffold16233 ScafM SNP 0034.scaffold00131 970750 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 970766 1 A T scaffold16233 ScafM SNP 0034.scaffold00131 970780 1 A C scaffold16233 ScafM SNP 0034.scaffold00131 970787 1 G T scaffold16233 ScafM SNP 0034.scaffold00131 970794 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 970798 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 970805 1 C T scaffold16233 ScafM SNP 0034.scaffold00131 970815 1 G T scaffold16233 ScafM SNP 0034.scaffold00131 970820 1 G T scaffold16233 ScafM SNP 0034.scaffold00131 970832 1 T C scaffold16233 ScafM INDEL 0034.scaffold00131 970842 3 TTC ... scaffold16233 ScafM INDEL 0034.scaffold00131 970850 4 CCTC .... scaffold16233 ScafM SNP 0034.scaffold00131 970873 1 A T scaffold16233 ScafM SNP 0034.scaffold00131 970882 1 T C scaffold16233 ScafM SNP 0034.scaffold00131 970891 1 C A scaffold16233 ScafM SNP 0034.scaffold00131 970898 1 G T scaffold16233 ScafM INDEL 0034.scaffold00131 970957 1 C . scaffold16233 ScafM INDEL 0034.scaffold00131 970960 1 A . scaffold16233 ScafM SNP 0034.scaffold00131 975369 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 975390 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 975398 1 C A scaffold4704 ScafM INDEL 0034.scaffold00131 975400 1 C . scaffold4704 ScafM SNP 0034.scaffold00131 975402 1 C G scaffold4704 ScafM SNP 0034.scaffold00131 975405 1 C T scaffold4704 ScafM INDEL 0034.scaffold00131 975422 2 .. TT scaffold4704 ScafM SNP 0034.scaffold00131 975423 1 C G scaffold4704 ScafM SNP 0034.scaffold00131 975437 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 975440 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 975462 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 975567 1 A C scaffold4704 ScafM SNP 0034.scaffold00131 976767 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 976787 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 976796 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 976806 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 976824 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 976826 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 976881 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 976896 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 976956 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 976973 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 976979 1 A G scaffold4704 ScafM INDEL 0034.scaffold00131 976985 2 AG .. scaffold4704 ScafM SNP 0034.scaffold00131 976996 1 T G scaffold4704 ScafM SNP 0034.scaffold00131 977053 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 977137 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 977237 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 977334 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 977355 1 T G scaffold4704 ScafM SNP 0034.scaffold00131 977380 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 977406 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 977450 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 977458 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 977486 2 AA TT scaffold4704 ScafM SNP 0034.scaffold00131 977499 1 C A scaffold4704 ScafM SNP 0034.scaffold00131 977535 1 G A scaffold4704 ScafM INDEL 0034.scaffold00131 977546 2 .C TA scaffold4704 ScafM SNP 0034.scaffold00131 977599 1 T G scaffold4704 ScafM SNP 0034.scaffold00131 977604 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 977620 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 977637 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 977675 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 977702 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 977774 1 A G scaffold4704 ScafM INDEL 0034.scaffold00131 977779 4 CATG .... scaffold4704 ScafM SNP 0034.scaffold00131 977833 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 977836 1 C A scaffold4704 Both SNP 0034.scaffold00131 977917 1 C A scaffold4704 ScafM SNP 0034.scaffold00131 978107 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 978134 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 978156 1 T A scaffold4704 ReadM SNP 0034.scaffold00131 978304 1 A G - ReadM SNP 0034.scaffold00131 978307 1 A C - ReadM SNP 0034.scaffold00131 978321 1 A G - ScafM SNP 0034.scaffold00131 978523 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 978531 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 978544 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 978557 1 A G scaffold4704 ScafM INDEL 0034.scaffold00131 978662 2 .. GA scaffold4704 ScafM SNP 0034.scaffold00131 978695 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 978721 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 978785 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 978818 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 978865 2 AT GC scaffold4704 ScafM INDEL 0034.scaffold00131 978924 5 GTTAA ..... scaffold4704 ScafM SNP 0034.scaffold00131 978997 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 979031 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 983540 1 T C scaffold5282 ScafM SNP 0034.scaffold00131 983543 1 C T scaffold5282 ScafM SNP 0034.scaffold00131 983594 1 G A scaffold5282 ScafM INDEL 0034.scaffold00131 983616 1 C . scaffold5282 ScafM SNP 0034.scaffold00131 983627 1 C T scaffold5282 ScafM INDEL 0034.scaffold00131 983650 2 .C TG scaffold5282 ScafM SNP 0034.scaffold00131 983656 1 G C scaffold5282 ScafM SNP 0034.scaffold00131 983658 1 T C scaffold5282 ScafM SNP 0034.scaffold00131 983706 1 G T scaffold5282 ScafM SNP 0034.scaffold00131 983735 1 C G scaffold5282 ScafM SNP 0034.scaffold00131 983752 1 T C scaffold5282 ScafM SNP 0034.scaffold00131 983770 1 C G scaffold5282 ScafM SNP 0034.scaffold00131 983776 1 C G scaffold5282 ScafM SNP 0034.scaffold00131 983797 1 C T scaffold5282 ScafM SNP 0034.scaffold00131 983799 1 A G scaffold5282 ScafM INDEL 0034.scaffold00131 983811 2 .. GA scaffold5282 ScafM SNP 0034.scaffold00131 983819 1 T G scaffold5282 ScafM SNP 0034.scaffold00131 992714 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 992718 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 992774 1 C T scaffold4704 ScafM INDEL 0034.scaffold00131 992783 8 ........ ATACAACT scaffold4704 ScafM SNP 0034.scaffold00131 992822 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 992849 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 992890 1 T C scaffold4704 ScafM INDEL 0034.scaffold00131 992913 2 AT .. scaffold4704 ScafM SNP 0034.scaffold00131 992925 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 992934 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 992941 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 992968 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 992970 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 992973 1 C G scaffold4704 ScafM SNP 0034.scaffold00131 994481 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 994486 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 994503 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 994505 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 994535 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 1022535 1 T C scaffold12270 ScafM SNP 0034.scaffold00131 1022542 1 C T scaffold12270 ScafM SNP 0034.scaffold00131 1022583 1 A G scaffold12270 ScafM SNP 0034.scaffold00131 1022595 1 C T scaffold12270 ScafM SNP 0034.scaffold00131 1022615 1 C T scaffold12270 ScafM SNP 0034.scaffold00131 1022622 1 C T scaffold12270 ScafM SNP 0034.scaffold00131 1022628 1 T C scaffold12270 ScafM SNP 0034.scaffold00131 1022632 1 G A scaffold12270 ScafM SNP 0034.scaffold00131 1022641 1 G A scaffold12270 ScafM SNP 0034.scaffold00131 1027141 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 1027174 1 C A scaffold4704 ScafM SNP 0034.scaffold00131 1027188 1 T G scaffold4704 ScafM SNP 0034.scaffold00131 1027216 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 1027219 2 GG TA scaffold4704 ScafM SNP 0034.scaffold00131 1027225 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 1027229 1 C A scaffold4704 ScafM INDEL 0034.scaffold00131 1027238 7 ....... GGTAATA scaffold4704 ScafM INDEL 0034.scaffold00131 1027243 1 . A scaffold4704 ScafM SNP 0034.scaffold00131 1027268 1 A T scaffold4704 ScafM INDEL 0034.scaffold00131 1027345 1 A . scaffold4704 ScafM SNP 0034.scaffold00131 1027368 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 1027374 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 1027386 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 1027436 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 1027452 1 A T scaffold4704 ScafM SNP 0034.scaffold00131 1027517 1 C T scaffold4704 ScafM INDEL 0034.scaffold00131 1027530 2 .C AA scaffold4704 ScafM INDEL 0034.scaffold00131 1027535 1 . C scaffold4704 ScafM SNP 0034.scaffold00131 1027540 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 1027551 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 1027567 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 1027604 1 A C scaffold4704 ReadM SNP 0034.scaffold00131 1028806 1 A G - ReadM SNP 0034.scaffold00131 1029145 1 T C - ReadM SNP 0034.scaffold00131 1029164 1 A T - ReadM SNP 0034.scaffold00131 1029384 1 T C - ReadM SNP 0034.scaffold00131 1029418 1 T A - ReadM SNP 0034.scaffold00131 1029468 1 C T - ReadM SNP 0034.scaffold00131 1029479 1 T C - ReadM SNP 0034.scaffold00131 1029582 1 G A - ReadM SNP 0034.scaffold00131 1029620 1 G A - ReadM SNP 0034.scaffold00131 1030236 1 G A - ReadM SNP 0034.scaffold00131 1030731 1 A G - ReadM SNP 0034.scaffold00131 1030755 1 T C - ReadM SNP 0034.scaffold00131 1030780 1 G A - ScafM SNP 0034.scaffold00131 1031537 1 G T scaffold486 ScafM SNP 0034.scaffold00131 1031556 1 T G scaffold486 ScafM SNP 0034.scaffold00131 1031576 3 GTA TGG scaffold486 ScafM SNP 0034.scaffold00131 1031598 1 A G scaffold486 ScafM SNP 0034.scaffold00131 1031609 1 A G scaffold486 ScafM SNP 0034.scaffold00131 1031633 1 T C scaffold486 ScafM SNP 0034.scaffold00131 1041600 1 C T scaffold16738 ScafM SNP 0034.scaffold00131 1041603 1 C T scaffold16738 ScafM SNP 0034.scaffold00131 1041611 1 T C scaffold16738 ScafM SNP 0034.scaffold00131 1041694 1 G A scaffold16738 ScafM SNP 0034.scaffold00131 1041742 1 G A scaffold16738 ScafM SNP 0034.scaffold00131 1041745 2 GT CA scaffold16738 ScafM SNP 0034.scaffold00131 1041753 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1041763 1 T C scaffold16738 ScafM SNP 0034.scaffold00131 1041778 1 G A scaffold16738 ScafM SNP 0034.scaffold00131 1041794 1 T G scaffold16738 ScafM SNP 0034.scaffold00131 1041825 1 T A scaffold16738 ScafM SNP 0034.scaffold00131 1041842 1 T C scaffold16738 ScafM SNP 0034.scaffold00131 1041847 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1041854 1 A T scaffold16738 ScafM SNP 0034.scaffold00131 1041858 1 G T scaffold16738 ScafM SNP 0034.scaffold00131 1041866 1 T C scaffold16738 ScafM SNP 0034.scaffold00131 1041924 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1041937 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1041945 1 A T scaffold16738 ScafM SNP 0034.scaffold00131 1041949 1 G A scaffold16738 ScafM SNP 0034.scaffold00131 1041951 1 C G scaffold16738 ScafM SNP 0034.scaffold00131 1041964 1 G A scaffold16738 ScafM SNP 0034.scaffold00131 1041970 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1042008 1 A G scaffold16738 ScafM SNP 0034.scaffold00131 1042012 1 C G scaffold16738 ScafM SNP 0034.scaffold00131 1042015 1 G C scaffold16738 ScafM SNP 0034.scaffold00131 1042076 1 A T scaffold7181 ScafM SNP 0034.scaffold00131 1042081 1 G A scaffold7181 ScafM SNP 0034.scaffold00131 1042086 1 G C scaffold7181 ScafM SNP 0034.scaffold00131 1042089 1 T C scaffold7181 ScafM SNP 0034.scaffold00131 1042122 1 G A scaffold7181 ScafM SNP 0034.scaffold00131 1042179 1 A G scaffold7181 ScafM INDEL 0034.scaffold00131 1042198 1 . T scaffold7181 ScafM SNP 0034.scaffold00131 1042221 2 AC GG scaffold7181 ScafM SNP 0034.scaffold00131 1042238 1 C T scaffold7181 ScafM SNP 0034.scaffold00131 1042245 1 G A scaffold7181 ScafM SNP 0034.scaffold00131 1042256 2 TT GC scaffold7181 ScafM SNP 0034.scaffold00131 1042271 1 A G scaffold7181 ScafM SNP 0034.scaffold00131 1042278 1 A G scaffold7181 ScafM SNP 0034.scaffold00131 1042337 1 G A scaffold7181 ScafM SNP 0034.scaffold00131 1056461 1 G A scaffold6069 ScafM SNP 0034.scaffold00131 1056467 1 C T scaffold6069 ScafM SNP 0034.scaffold00131 1056473 1 A G scaffold6069 ScafM INDEL 0034.scaffold00131 1056549 1 . T scaffold6069 ScafM SNP 0034.scaffold00131 1056591 1 A G scaffold6069 ScafM SNP 0034.scaffold00131 1056599 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056654 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056656 1 T A scaffold6069 ScafM SNP 0034.scaffold00131 1056687 1 C G scaffold6069 ScafM SNP 0034.scaffold00131 1056720 1 C T scaffold6069 ScafM SNP 0034.scaffold00131 1056771 1 T G scaffold6069 ScafM SNP 0034.scaffold00131 1056775 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056802 1 C G scaffold6069 ScafM SNP 0034.scaffold00131 1056811 1 C T scaffold6069 ScafM SNP 0034.scaffold00131 1056833 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056859 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056901 1 T G scaffold6069 ScafM SNP 0034.scaffold00131 1056904 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056930 1 A G scaffold6069 ScafM INDEL 0034.scaffold00131 1056960 2 AG .. scaffold6069 ScafM SNP 0034.scaffold00131 1056968 2 AG GT scaffold6069 ScafM SNP 0034.scaffold00131 1056980 1 T C scaffold6069 ScafM SNP 0034.scaffold00131 1056986 1 T A scaffold6069 ScafM SNP 0034.scaffold00131 1056996 1 A T scaffold6069 ScafM SNP 0034.scaffold00131 1057001 1 C T scaffold6069 ScafM SNP 0034.scaffold00131 1066324 1 G T scaffold4704 ScafM SNP 0034.scaffold00131 1066326 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 1066328 1 C A scaffold4704 ScafM INDEL 0034.scaffold00131 1066373 1 . A scaffold4704 ScafM SNP 0034.scaffold00131 1066402 1 G A scaffold4704 ScafM INDEL 0034.scaffold00131 1066412 1 C . scaffold4704 ScafM INDEL 0034.scaffold00131 1066415 1 T . scaffold4704 ScafM INDEL 0034.scaffold00131 1066417 2 TA .. scaffold4704 ScafM INDEL 0034.scaffold00131 1066420 4 GGGG .... scaffold4704 ScafM SNP 0034.scaffold00131 1066438 1 T A scaffold4704 ScafM SNP 0034.scaffold00131 1066535 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 1066587 1 G A scaffold4704 ScafM SNP 0034.scaffold00131 1066595 2 CT TC scaffold4704 ScafM SNP 0034.scaffold00131 1066598 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 1066616 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 1066624 1 C T scaffold4704 ScafM SNP 0034.scaffold00131 1066647 1 A C scaffold4704 ScafM SNP 0034.scaffold00131 1066657 1 A G scaffold4704 ScafM SNP 0034.scaffold00131 1066755 1 C A scaffold4704 ScafM SNP 0034.scaffold00131 1066760 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 1066776 1 C T scaffold4704 ScafM INDEL 0034.scaffold00131 1066812 1 . C scaffold4704 ScafM INDEL 0034.scaffold00131 1066832 8 ........ CGGAAGTC scaffold4704 ScafM SNP 0034.scaffold00131 1066841 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 1066871 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 1066875 1 G C scaffold4704 ScafM SNP 0034.scaffold00131 1066878 1 C A scaffold4704 ScafM SNP 0034.scaffold00131 1066914 1 T C scaffold4704 ScafM SNP 0034.scaffold00131 1066943 1 A G scaffold4704 ScafM SNP 0035.scaffold00136 9725 1 G A scaffold23563 ScafM SNP 0035.scaffold00136 9744 1 T A scaffold23563 ScafM INDEL 0035.scaffold00136 9749 1 . G scaffold23563 ScafM SNP 0035.scaffold00136 9751 1 T G scaffold23563 ScafM SNP 0035.scaffold00136 9754 1 T G scaffold23563 ReadM SNP 0035.scaffold00136 27210 1 T C - Both SNP 0035.scaffold00136 32750 1 T C scaffold5785 ScafM INDEL 0035.scaffold00136 44822 8 AATTATCC ........ scaffold5785 ScafM INDEL 0035.scaffold00136 62836 24 ........................ TTTTTTTTTTTTTTTTTTTTTTTT scaffold5785 ScafM INDEL 0035.scaffold00136 64098 19 ................... TCCCCCCCCCCCCCCCAAT scaffold5785 ScafM SNP 0035.scaffold00136 100942 4 CAGA TTTT scaffold8278 ScafM SNP 0035.scaffold00136 100948 2 AC TT scaffold8278 ScafM SNP 0035.scaffold00136 100955 1 C T scaffold8278 ScafM SNP 0035.scaffold00136 100957 4 AGCA TTTT scaffold8278 ScafM SNP 0035.scaffold00136 100962 2 GC TT scaffold8278 ScafM INDEL 0035.scaffold00136 100965 1 C . scaffold8278 ScafM INDEL 0035.scaffold00136 104196 1 . T scaffold8278 ScafM SNP 0035.scaffold00136 107371 2 AT GC scaffold1467 ScafM SNP 0035.scaffold00136 107383 1 A G scaffold1467 ScafM SNP 0035.scaffold00136 107392 1 G A scaffold1467 ScafM SNP 0035.scaffold00136 107398 2 AG TA scaffold1467 ScafM SNP 0035.scaffold00136 107406 1 T G scaffold1467 ScafM SNP 0035.scaffold00136 107412 1 A T scaffold1467 ScafM SNP 0035.scaffold00136 107446 2 CT TA scaffold1467 ScafM SNP 0035.scaffold00136 107451 1 T G scaffold1467 ScafM SNP 0035.scaffold00136 107465 1 A G scaffold1467 ScafM SNP 0035.scaffold00136 107468 2 CA TG scaffold1467 ScafM SNP 0035.scaffold00136 107504 1 T G scaffold1467 ScafM INDEL 0035.scaffold00136 107545 1 T . scaffold1467 ScafM INDEL 0035.scaffold00136 107549 1 A . scaffold1467 ScafM SNP 0035.scaffold00136 107555 1 C T scaffold1467 ScafM SNP 0035.scaffold00136 111944 1 G T scaffold8278 ReadM INDEL 0035.scaffold00136 136394 1 T . - ReadM SNP 0035.scaffold00136 152322 1 T C - ScafM INDEL 0035.scaffold00136 160345 1 . T scaffold13730 ScafM INDEL 0035.scaffold00136 162945 1 . G scaffold13730 ScafM INDEL 0035.scaffold00136 163220 2 AT .. scaffold13730 ReadM SNP 0035.scaffold00136 178334 1 A G - ReadM INDEL 0035.scaffold00136 181514 1 A . - ScafM INDEL 0035.scaffold00136 184436 1 . T scaffold13730 ScafM INDEL 0035.scaffold00136 202961 5 TCAAA ..... scaffold27679 ScafM INDEL 0035.scaffold00136 203051 1 A . scaffold27679 ScafM SNP 0035.scaffold00136 249656 2 GT AC scaffold879 ScafM SNP 0035.scaffold00136 249684 1 T C scaffold879 ScafM SNP 0035.scaffold00136 249986 1 C T scaffold10193 ScafM SNP 0035.scaffold00136 250066 1 T C scaffold10193 ScafM SNP 0035.scaffold00136 250080 2 CA TT scaffold10193 ReadM INDEL 0035.scaffold00136 255460 1 T . - ScafM INDEL 0035.scaffold00136 265512 1 . A scaffold7285 ScafM INDEL 0035.scaffold00136 265654 1 . A scaffold7285 ScafM INDEL 0035.scaffold00136 271683 1 T . scaffold2348 ScafM SNP 0035.scaffold00136 271747 1 A T scaffold2348 ScafM SNP 0035.scaffold00136 271759 1 A G scaffold2348 ScafM INDEL 0035.scaffold00136 271813 3 CGG ... scaffold2348 ScafM SNP 0035.scaffold00136 271824 1 G A scaffold2348 ScafM SNP 0035.scaffold00136 271835 1 G A scaffold2348 ScafM SNP 0035.scaffold00136 271860 2 TT AA scaffold2348 ScafM SNP 0035.scaffold00136 271920 1 T G scaffold2348 ScafM SNP 0035.scaffold00136 272263 1 A T scaffold2348 ScafM SNP 0035.scaffold00136 272491 1 G C scaffold2348 ScafM SNP 0035.scaffold00136 272565 1 A T scaffold2348 ScafM SNP 0035.scaffold00136 272708 1 C A scaffold2348 ScafM SNP 0035.scaffold00136 272782 1 C T scaffold2348 ScafM SNP 0035.scaffold00136 272791 1 G A scaffold2348 ScafM SNP 0035.scaffold00136 273127 1 C T scaffold2348 ScafM SNP 0035.scaffold00136 273167 1 T A scaffold2348 ScafM SNP 0035.scaffold00136 273178 1 C A scaffold2348 ScafM SNP 0035.scaffold00136 273254 1 C G scaffold2348 Both SNP 0035.scaffold00136 273357 1 T C scaffold2348 ScafM SNP 0035.scaffold00136 273369 1 G A scaffold2348 ScafM SNP 0035.scaffold00136 273404 1 T C scaffold2348 ScafM SNP 0035.scaffold00136 273418 1 C T scaffold2348 ScafM SNP 0035.scaffold00136 273440 1 G A scaffold2348 ScafM SNP 0035.scaffold00136 273485 1 T G scaffold2348 ScafM SNP 0035.scaffold00136 273526 1 G A scaffold2348 ScafM INDEL 0035.scaffold00136 273542 3 TTA ... scaffold2348 ScafM SNP 0035.scaffold00136 273615 1 C G scaffold2348 ScafM SNP 0035.scaffold00136 273623 1 G C scaffold2348 ScafM SNP 0035.scaffold00136 273626 1 G C scaffold2348 ScafM SNP 0035.scaffold00136 273635 1 A T scaffold2348 ScafM SNP 0035.scaffold00136 273639 1 C A scaffold2348 ScafM INDEL 0035.scaffold00136 273645 1 C . scaffold2348 ScafM INDEL 0035.scaffold00136 273687 1 C . scaffold2348 ScafM INDEL 0035.scaffold00136 273697 4 .... TGCA scaffold2348 ScafM SNP 0035.scaffold00136 273781 1 C T scaffold2348 ScafM SNP 0035.scaffold00136 274061 2 TA GT scaffold7285 ScafM SNP 0035.scaffold00136 274067 1 G T scaffold7285 ScafM SNP 0035.scaffold00136 274077 1 C T scaffold7285 ScafM INDEL 0035.scaffold00136 274089 2 TC .. scaffold7285 ScafM SNP 0035.scaffold00136 274106 1 C A scaffold7285 ScafM SNP 0035.scaffold00136 274501 1 C T scaffold7285 ScafM SNP 0035.scaffold00136 274592 2 GT AG scaffold7285 ScafM SNP 0035.scaffold00136 274636 1 A G scaffold7285 ScafM SNP 0035.scaffold00136 274677 1 G A scaffold7285 Both SNP 0035.scaffold00136 299736 1 T G scaffold7285 ScafM SNP 0035.scaffold00136 310975 1 G T scaffold7285 ScafM INDEL 0035.scaffold00136 310978 1 C . scaffold7285 ScafM INDEL 0035.scaffold00136 310980 3 GCC ..T scaffold7285 ScafM SNP 0035.scaffold00136 310984 1 C T scaffold7285 ScafM SNP 0035.scaffold00136 310987 1 G A scaffold7285 ScafM INDEL 0035.scaffold00136 310990 3 CCC ... scaffold7285 ScafM SNP 0035.scaffold00136 310994 1 C A scaffold7285 ScafM SNP 0035.scaffold00136 310997 1 C T scaffold7285 ScafM SNP 0035.scaffold00136 311008 1 G T scaffold7285 ScafM SNP 0035.scaffold00136 311010 1 T G scaffold7285 ScafM INDEL 0035.scaffold00136 311017 1 T . scaffold7285 ScafM INDEL 0035.scaffold00136 322446 1 . T scaffold22223 ReadM SNP 0035.scaffold00136 326778 1 G T - ReadM SNP 0035.scaffold00136 374763 1 C T - ScafM SNP 0035.scaffold00136 414673 1 G T scaffold468 ReadM INDEL 0035.scaffold00136 419015 1 G . - ReadM SNP 0035.scaffold00136 433366 1 G A - ReadM SNP 0035.scaffold00136 447818 1 A G - ScafM SNP 0035.scaffold00136 453307 1 T C scaffold7659 ScafM SNP 0035.scaffold00136 465132 1 A G scaffold12766 ScafM INDEL 0035.scaffold00136 482783 3 ... AAA scaffold12766 ScafM SNP 0035.scaffold00136 499710 1 A G scaffold7025 ScafM SNP 0035.scaffold00136 499728 1 C T scaffold7025 ScafM SNP 0035.scaffold00136 499733 1 A T scaffold7025 ScafM SNP 0035.scaffold00136 499759 1 T A scaffold7025 Both SNP 0035.scaffold00136 503719 1 C T scaffold7025 ReadM SNP 0035.scaffold00136 517463 1 A G - ScafM INDEL 0035.scaffold00136 520293 1 A . scaffold7025 ScafM INDEL 0035.scaffold00136 523805 1 . A scaffold7025 ScafM SNP 0035.scaffold00136 533097 1 C T scaffold29901 ScafM SNP 0035.scaffold00136 533224 1 G C scaffold29901 ScafM SNP 0035.scaffold00136 533233 1 C G scaffold29901 ScafM SNP 0035.scaffold00136 533287 1 T G scaffold29901 ScafM SNP 0035.scaffold00136 533354 1 G C scaffold29901 ScafM SNP 0035.scaffold00136 533375 1 C G scaffold29901 ScafM SNP 0035.scaffold00136 533410 1 G A scaffold29901 ScafM INDEL 0035.scaffold00136 537322 14 CACTATAATATGTT .............. scaffold9530 ScafM SNP 0035.scaffold00136 537836 1 G C scaffold9530 ScafM SNP 0035.scaffold00136 537933 1 G C scaffold9530 ScafM SNP 0035.scaffold00136 537980 1 C G scaffold9530 ScafM SNP 0035.scaffold00136 537998 1 G C scaffold9530 ScafM SNP 0035.scaffold00136 538067 1 A G scaffold9530 ScafM SNP 0035.scaffold00136 538302 1 C A scaffold9530 ScafM INDEL 0035.scaffold00136 538387 4 AAGA .... scaffold9530 ScafM INDEL 0035.scaffold00136 538393 1 A . scaffold9530 ScafM INDEL 0035.scaffold00136 538396 1 A . scaffold9530 ScafM SNP 0035.scaffold00136 538400 1 A C scaffold9530 ScafM SNP 0035.scaffold00136 538460 1 T C scaffold9530 ScafM SNP 0035.scaffold00136 538505 1 T A scaffold9530 ScafM INDEL 0035.scaffold00136 538611 32 ................................ ATTCGTAAGTTACATATGTGTTTATAAAATAT scaffold9530 ScafM SNP 0035.scaffold00136 538693 1 T C scaffold9530 ScafM INDEL 0035.scaffold00136 538713 1 T . scaffold9530 ScafM INDEL 0035.scaffold00136 538716 1 T . scaffold9530 ScafM SNP 0035.scaffold00136 538718 1 T C scaffold9530 ScafM INDEL 0035.scaffold00136 538721 3 TAT ... scaffold9530 ScafM SNP 0035.scaffold00136 538726 1 A T scaffold9530 ScafM SNP 0035.scaffold00136 538738 1 T A scaffold9530 ScafM SNP 0035.scaffold00136 538741 1 T A scaffold9530 ScafM INDEL 0035.scaffold00136 538769 7 TCTGGTC ....... scaffold9530 ScafM SNP 0035.scaffold00136 538779 1 A G scaffold9530 ScafM SNP 0035.scaffold00136 538788 1 T A scaffold9530 ScafM SNP 0035.scaffold00136 538806 1 A T scaffold9530 ScafM SNP 0035.scaffold00136 538825 1 G A scaffold9530 ScafM SNP 0035.scaffold00136 538852 1 T C scaffold9530 ScafM SNP 0035.scaffold00136 538890 1 G A scaffold9530 ScafM INDEL 0035.scaffold00136 538951 1 . T scaffold9530 ScafM SNP 0035.scaffold00136 545789 1 T C scaffold2737 ReadM SNP 0035.scaffold00136 552519 1 C T - ReadM INDEL 0035.scaffold00136 559589 1 . T - ScafM SNP 0035.scaffold00136 565307 1 A T scaffold2737 ScafM SNP 0035.scaffold00136 566613 1 T A scaffold2737 Both SNP 0035.scaffold00136 574385 1 T C scaffold2737 ReadM SNP 0035.scaffold00136 581250 1 G T - ReadM SNP 0035.scaffold00136 582908 1 C G - ReadM SNP 0035.scaffold00136 604792 1 T C - ScafM INDEL 0035.scaffold00136 609678 1 . T scaffold2741 ScafM SNP 0035.scaffold00136 656581 1 C G scaffold5689 ScafM SNP 0035.scaffold00136 656607 1 A G scaffold5689 ScafM SNP 0035.scaffold00136 656618 1 G A scaffold5689 ScafM INDEL 0035.scaffold00136 656663 2 AC .. scaffold5689 ScafM SNP 0035.scaffold00136 656667 1 A G scaffold5689 ScafM INDEL 0035.scaffold00136 656670 1 C . scaffold5689 ScafM SNP 0035.scaffold00136 656682 1 T C scaffold5689 ScafM SNP 0035.scaffold00136 656693 1 C T scaffold5689 ScafM SNP 0035.scaffold00136 656697 1 C T scaffold5689 ScafM INDEL 0035.scaffold00136 656707 1 A . scaffold5689 ScafM INDEL 0035.scaffold00136 656709 8 ACACCCCC ........ scaffold5689 ScafM SNP 0035.scaffold00136 656727 1 T C scaffold5689 ScafM SNP 0035.scaffold00136 656729 1 T C scaffold5689 ScafM SNP 0035.scaffold00136 656762 1 C T scaffold5689 ScafM SNP 0035.scaffold00136 656796 1 A T scaffold5689 ScafM SNP 0035.scaffold00136 656802 2 GA TC scaffold5689 ScafM SNP 0035.scaffold00136 656849 1 C T scaffold5689 ScafM SNP 0035.scaffold00136 656856 1 G A scaffold5689 ScafM SNP 0035.scaffold00136 656861 1 T A scaffold5689 ScafM SNP 0035.scaffold00136 656867 1 T G scaffold5689 ScafM SNP 0035.scaffold00136 656882 1 C T scaffold5689 ScafM SNP 0035.scaffold00136 656893 1 T C scaffold5689 ScafM SNP 0035.scaffold00136 656897 1 G T scaffold5689 ScafM INDEL 0035.scaffold00136 656901 1 . A scaffold5689 ScafM SNP 0035.scaffold00136 656908 1 C A scaffold5689 ScafM SNP 0035.scaffold00136 656936 1 T A scaffold5689 ScafM SNP 0035.scaffold00136 656956 1 G A scaffold5689 ScafM SNP 0035.scaffold00136 656974 1 C A scaffold5689 ScafM SNP 0035.scaffold00136 656977 1 A G scaffold5689 Both INDEL 0035.scaffold00136 701702 1 . T scaffold153 ScafM SNP 0035.scaffold00136 713116 2 TA CC scaffold153 ScafM SNP 0035.scaffold00136 713158 1 A G scaffold153 ScafM INDEL 0035.scaffold00136 715801 63 ............................................................... TTGCGGTAATGGGAATGAATTTAAGTGTAATTTTATTAGGGAAGCACCCTTAAAATCTCCACG scaffold153 ScafM INDEL 0035.scaffold00136 718169 1 T . scaffold153 ScafM SNP 0035.scaffold00136 728898 1 C T scaffold153 ScafM SNP 0035.scaffold00136 729526 1 C A scaffold16523 ScafM SNP 0035.scaffold00136 729558 1 A G scaffold16523 ScafM SNP 0035.scaffold00136 729562 1 G C scaffold16523 ScafM SNP 0035.scaffold00136 729617 1 A C scaffold16523 ScafM INDEL 0035.scaffold00136 729637 1 C . scaffold16523 ScafM SNP 0035.scaffold00136 729643 1 T G scaffold16523 ScafM SNP 0035.scaffold00136 729695 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 729711 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 729727 1 T C scaffold16523 ScafM INDEL 0035.scaffold00136 729755 1 . G scaffold16523 ScafM SNP 0035.scaffold00136 729799 1 C A scaffold16523 ScafM SNP 0035.scaffold00136 729804 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 729978 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 730057 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 730067 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 730089 1 C A scaffold16523 ScafM SNP 0035.scaffold00136 730093 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 730117 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 730121 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 730133 1 G T scaffold16523 ScafM SNP 0035.scaffold00136 730228 1 T C scaffold16523 ScafM SNP 0035.scaffold00136 730325 1 T A scaffold16523 ScafM SNP 0035.scaffold00136 730362 1 G C scaffold16523 ScafM SNP 0035.scaffold00136 730381 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 730398 1 C A scaffold16523 ScafM INDEL 0035.scaffold00136 730423 7 ....... CCGTTTA scaffold16523 ScafM INDEL 0035.scaffold00136 730428 1 . C scaffold16523 ScafM INDEL 0035.scaffold00136 730431 1 . C scaffold16523 ScafM SNP 0035.scaffold00136 730437 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 730442 1 T C scaffold16523 ScafM INDEL 0035.scaffold00136 730463 1 A . scaffold16523 ScafM SNP 0035.scaffold00136 730469 1 C T scaffold16523 ScafM SNP 0035.scaffold00136 730483 1 G A scaffold16523 ScafM INDEL 0035.scaffold00136 735048 1 . T scaffold153 ScafM INDEL 0035.scaffold00136 736505 1 . A scaffold2216 ScafM SNP 0035.scaffold00136 736512 1 A G scaffold2216 ScafM SNP 0035.scaffold00136 736517 1 G T scaffold2216 ScafM SNP 0035.scaffold00136 736535 1 T C scaffold2216 ScafM SNP 0035.scaffold00136 736545 1 A G scaffold2216 ScafM SNP 0035.scaffold00136 736547 1 G A scaffold2216 ScafM SNP 0035.scaffold00136 736568 1 C T scaffold2216 ScafM SNP 0035.scaffold00136 736576 1 C T scaffold2216 ScafM SNP 0035.scaffold00136 736612 2 TT CA scaffold2216 ScafM SNP 0035.scaffold00136 736619 2 CC TT scaffold2216 ScafM SNP 0035.scaffold00136 736695 1 T A scaffold2216 ScafM SNP 0035.scaffold00136 736704 1 C T scaffold2216 ScafM SNP 0035.scaffold00136 736726 1 G T scaffold2216 ScafM INDEL 0035.scaffold00136 736820 4 AGCT .... scaffold2216 ScafM SNP 0035.scaffold00136 736893 1 T C scaffold2216 ScafM SNP 0035.scaffold00136 736910 1 T C scaffold2216 ReadM INDEL 0035.scaffold00136 772893 1 T . - ReadM INDEL 0035.scaffold00136 779725 1 . T - ReadM SNP 0035.scaffold00136 780760 1 C T - ScafM SNP 0035.scaffold00136 786050 1 C G scaffold3518 ReadM INDEL 0035.scaffold00136 800505 1 T . - ScafM SNP 0035.scaffold00136 805415 1 G A scaffold2999 ScafM SNP 0035.scaffold00136 805419 1 T C scaffold2999 ScafM SNP 0035.scaffold00136 805736 1 C A scaffold4966 ScafM SNP 0035.scaffold00136 805739 1 G A scaffold4966 ScafM SNP 0035.scaffold00136 805775 1 C T scaffold4966 ScafM SNP 0035.scaffold00136 805783 1 A G scaffold4966 ScafM SNP 0035.scaffold00136 805850 1 G A scaffold4966 ScafM SNP 0035.scaffold00136 805865 1 G A scaffold4966 ScafM SNP 0035.scaffold00136 805879 1 C A scaffold4966 ScafM SNP 0035.scaffold00136 805922 1 C T scaffold4966 ScafM SNP 0035.scaffold00136 805934 1 T C scaffold4966 ScafM SNP 0035.scaffold00136 805940 1 A G scaffold4966 ScafM SNP 0035.scaffold00136 805960 1 A G scaffold4966 ScafM SNP 0035.scaffold00136 805962 1 T C scaffold4966 ScafM SNP 0035.scaffold00136 805971 1 T C scaffold4966 ScafM SNP 0035.scaffold00136 805981 1 A C scaffold4966 ScafM SNP 0035.scaffold00136 806002 1 C A scaffold4966 ScafM SNP 0035.scaffold00136 806007 1 T C scaffold4966 ScafM INDEL 0035.scaffold00136 806886 1 . T scaffold2999 Both SNP 0035.scaffold00136 813712 1 G T scaffold2999 ScafM SNP 0035.scaffold00136 830236 1 A G scaffold2999 ScafM INDEL 0035.scaffold00136 841329 1 . T scaffold2999 ScafM SNP 0035.scaffold00136 841360 1 G T scaffold2999 ScafM INDEL 0035.scaffold00136 841386 3 ... TCA scaffold2999 ScafM INDEL 0035.scaffold00136 841429 1 C . scaffold2999 ScafM SNP 0035.scaffold00136 841533 1 G C scaffold2999 ScafM INDEL 0035.scaffold00136 841569 31 ............................... CTTTGAAGTTGCGATTCTCACATTTCCTAAT scaffold2999 ReadM INDEL 0035.scaffold00136 843070 1 . T - ReadM SNP 0035.scaffold00136 843116 1 T C - ScafM INDEL 0035.scaffold00136 846130 1 . A scaffold2999 ScafM INDEL 0035.scaffold00136 854899 1 . A scaffold2999 ReadM SNP 0035.scaffold00136 860171 1 A G - ScafM INDEL 0035.scaffold00136 895995 2 AT .. scaffold11871 ScafM SNP 0035.scaffold00136 902250 1 G A C13477839 ScafM INDEL 0035.scaffold00136 925168 1 . T scaffold8515 ScafM SNP 0035.scaffold00136 941773 1 G C scaffold8515 ScafM SNP 0035.scaffold00136 941783 1 C G scaffold8515 ScafM SNP 0035.scaffold00136 941808 1 A T scaffold8515 ScafM SNP 0035.scaffold00136 941859 1 T A scaffold8515 ReadM SNP 0035.scaffold00136 974788 1 G C - Both SNP 0035.scaffold00136 983978 1 A G scaffold5511 ReadM INDEL 0035.scaffold00136 1007212 1 . C - ScafM INDEL 0035.scaffold00136 1024509 1 . A scaffold6643 ScafM SNP 0035.scaffold00136 1040740 1 G A scaffold6643 ScafM INDEL 0035.scaffold00136 1048322 1 . T scaffold6643 ReadM INDEL 0035.scaffold00136 1084145 2 TG .. - ScafM SNP 0035.scaffold00136 1089645 1 G T scaffold10621 ScafM SNP 0035.scaffold00136 1089653 1 A G scaffold10621 ScafM SNP 0035.scaffold00136 1097952 1 T C scaffold17931 ScafM SNP 0035.scaffold00136 1097959 1 C T scaffold17931 ScafM SNP 0035.scaffold00136 1097977 2 TA AG scaffold17931 ScafM SNP 0035.scaffold00136 1098001 1 T A scaffold17931 ScafM SNP 0035.scaffold00136 1098032 1 C T scaffold17931 ScafM SNP 0035.scaffold00136 1098056 1 T C scaffold17931 ScafM SNP 0035.scaffold00136 1098077 2 TA AG scaffold17931 ScafM SNP 0035.scaffold00136 1098081 1 T C scaffold17931 ReadM SNP 0036.scaffold00137 1220 1 T C - ScafM INDEL 0036.scaffold00137 2847 1 . T scaffold17752 ScafM SNP 0036.scaffold00137 7146 1 T C scaffold17752 Both SNP 0036.scaffold00137 10237 1 G A scaffold17752 Both INDEL 0036.scaffold00137 14399 3 GGG ... scaffold17752 ReadM INDEL 0036.scaffold00137 15044 3 CTT ... - Both SNP 0036.scaffold00137 17541 1 T C scaffold17752 ScafM SNP 0036.scaffold00137 20939 1 T C scaffold17752 ScafM SNP 0036.scaffold00137 20982 1 G A scaffold17752 ReadM INDEL 0036.scaffold00137 21283 1 C . - ReadM SNP 0036.scaffold00137 25222 1 G T - ScafM INDEL 0036.scaffold00137 25778 2 .. AA scaffold17752 ScafM INDEL 0036.scaffold00137 25784 1 . A scaffold17752 ScafM INDEL 0036.scaffold00137 25908 1 T . scaffold17752 ScafM INDEL 0036.scaffold00137 27999 1 A . scaffold17752 Both SNP 0036.scaffold00137 28412 1 A T scaffold17752 ReadM SNP 0036.scaffold00137 30212 1 A G - ReadM SNP 0036.scaffold00137 31754 1 G T - ScafM SNP 0036.scaffold00137 31953 1 C T scaffold17752 ReadM SNP 0036.scaffold00137 32240 1 T C - Both SNP 0036.scaffold00137 32912 1 A T scaffold17752 ReadM SNP 0036.scaffold00137 34523 1 T G - ScafM INDEL 0036.scaffold00137 36779 1 . T scaffold17752 ReadM INDEL 0036.scaffold00137 37120 1 A . - Both SNP 0036.scaffold00137 37768 1 A T scaffold17752 ReadM SNP 0036.scaffold00137 37824 1 A G - ReadM SNP 0036.scaffold00137 38918 1 A T - ReadM SNP 0036.scaffold00137 40538 1 A C - ReadM SNP 0036.scaffold00137 43744 1 G A - ReadM SNP 0036.scaffold00137 43822 1 C T - ReadM SNP 0036.scaffold00137 43952 1 G A - Both SNP 0036.scaffold00137 49193 1 G A scaffold17752 Both SNP 0036.scaffold00137 49195 1 T A scaffold17752 ReadM SNP 0036.scaffold00137 50098 1 C T - ReadM SNP 0036.scaffold00137 54587 1 C T - ReadM SNP 0036.scaffold00137 54790 1 A G - ReadM SNP 0036.scaffold00137 56100 1 T C - Both SNP 0036.scaffold00137 57868 1 T A scaffold17752 ReadM SNP 0036.scaffold00137 59122 1 A G - ReadM SNP 0036.scaffold00137 59218 1 A C - ReadM INDEL 0036.scaffold00137 59227 1 . T - ReadM SNP 0036.scaffold00137 59998 1 T C - ReadM SNP 0036.scaffold00137 66253 1 T A - Both SNP 0036.scaffold00137 68210 1 A G scaffold17752 Both INDEL 0036.scaffold00137 68453 1 . A scaffold17752 Both SNP 0036.scaffold00137 69248 1 T C scaffold17752 Both SNP 0036.scaffold00137 71499 1 G T scaffold17752 ReadM SNP 0036.scaffold00137 71590 1 T C - ReadM SNP 0036.scaffold00137 75674 1 C T - Both INDEL 0036.scaffold00137 76667 1 . T scaffold17752 ReadM SNP 0036.scaffold00137 77182 1 G A - Both SNP 0036.scaffold00137 83867 1 G C scaffold17752 ReadM SNP 0036.scaffold00137 84217 1 C T - Both SNP 0036.scaffold00137 84813 1 A G scaffold17752 ReadM SNP 0036.scaffold00137 85307 1 C T - ReadM SNP 0036.scaffold00137 87431 1 C T - Both SNP 0036.scaffold00137 88351 1 G A scaffold17752 ScafM INDEL 0036.scaffold00137 88508 1 . T scaffold17752 Both INDEL 0036.scaffold00137 91598 1 . C scaffold14703 ScafM SNP 0036.scaffold00137 91681 1 G A scaffold14703 Both SNP 0036.scaffold00137 91762 1 A C scaffold14703 ReadM SNP 0036.scaffold00137 93213 1 C T - Both SNP 0036.scaffold00137 93807 1 A C scaffold14703 Both SNP 0036.scaffold00137 94211 1 T C scaffold14703 Both SNP 0036.scaffold00137 97548 1 A G scaffold14703 ReadM SNP 0036.scaffold00137 99074 1 T C - ReadM SNP 0036.scaffold00137 100264 1 A C - ReadM SNP 0036.scaffold00137 100708 1 G A - ScafM INDEL 0036.scaffold00137 114704 1 T . scaffold14703 ScafM INDEL 0036.scaffold00137 115071 2 .. AA scaffold14703 Both SNP 0036.scaffold00137 126416 1 A G scaffold14703 ScafM INDEL 0036.scaffold00137 128313 1 . G scaffold14703 ScafM SNP 0036.scaffold00137 128315 1 T G scaffold14703 ScafM SNP 0036.scaffold00137 138317 1 A G scaffold10322 ScafM INDEL 0036.scaffold00137 138388 1 . G scaffold10322 ReadM INDEL 0036.scaffold00137 156147 1 . T - ScafM INDEL 0036.scaffold00137 189040 1 . A scaffold1169 ScafM INDEL 0036.scaffold00137 207232 1 C . scaffold1169 ReadM SNP 0036.scaffold00137 213965 1 G A - ScafM INDEL 0036.scaffold00137 215332 14 .............. TGTTTAAGCCACCA scaffold1169 ScafM INDEL 0036.scaffold00137 215334 2 .. TT scaffold1169 ScafM INDEL 0036.scaffold00137 215339 9 ......... AAAGTAAAA scaffold1169 ScafM INDEL 0036.scaffold00137 215341 10 .......... GGCTTTGATT scaffold1169 ScafM INDEL 0036.scaffold00137 215345 12 ............ GTCTTTCTACCA scaffold1169 ScafM INDEL 0036.scaffold00137 215348 1 . T scaffold1169 ScafM INDEL 0036.scaffold00137 215371 4 CCCC ...T scaffold1169 ScafM SNP 0036.scaffold00137 215376 1 C T scaffold1169 ScafM INDEL 0036.scaffold00137 217164 1 A . scaffold109 ScafM SNP 0036.scaffold00137 217171 1 T G scaffold109 ScafM SNP 0036.scaffold00137 217185 1 C T scaffold109 ScafM SNP 0036.scaffold00137 217216 1 C T scaffold109 ScafM SNP 0036.scaffold00137 217222 1 G A scaffold109 ScafM SNP 0036.scaffold00137 217268 1 T A scaffold109 Both INDEL 0036.scaffold00137 217273 1 . T scaffold109 ScafM SNP 0036.scaffold00137 217282 1 G T scaffold109 ScafM INDEL 0036.scaffold00137 217315 1 T . scaffold109 ScafM SNP 0036.scaffold00137 217326 1 A C scaffold109 ScafM INDEL 0036.scaffold00137 217354 1 A . scaffold109 ScafM SNP 0036.scaffold00137 217371 1 A T scaffold109 ScafM SNP 0036.scaffold00137 217378 1 A T scaffold109 ScafM INDEL 0036.scaffold00137 233277 1 . G scaffold1169 ScafM INDEL 0036.scaffold00137 235583 1 C . scaffold1169 ScafM INDEL 0036.scaffold00137 235802 1 G . scaffold1169 Both SNP 0036.scaffold00137 243965 1 C T scaffold1169 ScafM INDEL 0036.scaffold00137 244844 1 . T scaffold1169 ScafM SNP 0036.scaffold00137 251005 1 C G scaffold1169 ScafM SNP 0036.scaffold00137 254701 1 A T scaffold1169 ScafM SNP 0036.scaffold00137 287224 1 G A scaffold1169 ScafM INDEL 0036.scaffold00137 288934 1 . A scaffold1169 ReadM SNP 0036.scaffold00137 293575 1 T A - ScafM INDEL 0036.scaffold00137 299474 3 ... TTT scaffold1169 ScafM SNP 0036.scaffold00137 301143 1 G T scaffold1169 ScafM SNP 0036.scaffold00137 301145 1 C T scaffold1169 ScafM SNP 0036.scaffold00137 301159 1 T C scaffold1169 ScafM INDEL 0036.scaffold00137 301176 1 A . scaffold1169 ScafM SNP 0036.scaffold00137 301178 1 C A scaffold1169 ScafM SNP 0036.scaffold00137 301184 1 T C scaffold1169 ScafM SNP 0036.scaffold00137 301193 1 A T scaffold1169 ScafM SNP 0036.scaffold00137 301197 1 T A scaffold1169 ScafM SNP 0036.scaffold00137 301206 1 A C scaffold1169 ScafM SNP 0036.scaffold00137 301216 2 AG GT scaffold1169 ScafM SNP 0036.scaffold00137 301219 1 C G scaffold1169 ScafM SNP 0036.scaffold00137 301231 1 A C scaffold1169 ScafM SNP 0036.scaffold00137 301233 3 TTC CAA scaffold1169 ScafM SNP 0036.scaffold00137 301238 2 CT TC scaffold1169 ScafM SNP 0036.scaffold00137 301242 1 C G scaffold1169 ScafM SNP 0036.scaffold00137 301252 1 T A scaffold1169 ScafM SNP 0036.scaffold00137 301255 2 TG CT scaffold1169 ScafM INDEL 0036.scaffold00137 301261 2 GC .T scaffold1169 ScafM SNP 0036.scaffold00137 301264 1 A G scaffold1169 ScafM SNP 0036.scaffold00137 301267 2 TT GC scaffold1169 ScafM SNP 0036.scaffold00137 301277 2 AG GA scaffold1169 ScafM SNP 0036.scaffold00137 301321 1 C G scaffold1169 ScafM SNP 0036.scaffold00137 301338 1 A C scaffold1169 ScafM SNP 0036.scaffold00137 301351 1 C A scaffold1169 ScafM SNP 0036.scaffold00137 301355 2 AA CT scaffold1169 ScafM SNP 0036.scaffold00137 301363 1 A C scaffold1169 ScafM SNP 0036.scaffold00137 301373 1 G A scaffold1169 ScafM SNP 0036.scaffold00137 301384 1 T C scaffold1169 ScafM SNP 0036.scaffold00137 301404 1 C A scaffold1169 ScafM SNP 0036.scaffold00137 301415 1 C T scaffold1169 ScafM SNP 0036.scaffold00137 301420 1 A T scaffold1169 ScafM SNP 0036.scaffold00137 301425 1 G A scaffold1169 ScafM SNP 0036.scaffold00137 301438 1 T C scaffold1169 ScafM SNP 0036.scaffold00137 301441 1 C G scaffold1169 ScafM INDEL 0036.scaffold00137 301445 2 .A GG scaffold1169 ScafM INDEL 0036.scaffold00137 301494 2 .. GC scaffold1169 ScafM INDEL 0036.scaffold00137 301507 1 T . scaffold1169 ScafM SNP 0036.scaffold00137 301510 2 CC AA scaffold1169 ScafM INDEL 0036.scaffold00137 301514 1 . T scaffold1169 ScafM SNP 0036.scaffold00137 309338 1 A T scaffold3144 ScafM SNP 0036.scaffold00137 309340 1 T A scaffold3144 ScafM SNP 0036.scaffold00137 327243 1 A C scaffold187 ReadM SNP 0036.scaffold00137 335123 1 C T - ScafM INDEL 0036.scaffold00137 341905 17 ................. AGTTCTGACATCTGATC scaffold187 ScafM SNP 0036.scaffold00137 342237 1 G A scaffold187 ScafM SNP 0036.scaffold00137 385978 1 G A scaffold187 ScafM SNP 0036.scaffold00137 386084 1 A C scaffold187 ScafM SNP 0036.scaffold00137 386103 1 T G scaffold187 ScafM SNP 0036.scaffold00137 386138 1 G A scaffold187 ScafM INDEL 0036.scaffold00137 388299 1 . T scaffold187 ScafM SNP 0036.scaffold00137 388303 1 C T scaffold187 ScafM SNP 0036.scaffold00137 388309 1 C T scaffold187 Both SNP 0036.scaffold00137 388629 1 C T scaffold187 ScafM INDEL 0036.scaffold00137 392795 1 A . scaffold187 ScafM SNP 0036.scaffold00137 392874 1 C T scaffold187 ScafM SNP 0036.scaffold00137 393119 1 C A scaffold187 Both SNP 0036.scaffold00137 394264 1 C T scaffold187 ReadM SNP 0036.scaffold00137 394699 1 G C - ScafM INDEL 0036.scaffold00137 396362 1 T . scaffold187 Both SNP 0036.scaffold00137 396995 1 G C scaffold187 ReadM SNP 0036.scaffold00137 398835 1 T A - Both SNP 0036.scaffold00137 398969 1 C T scaffold187 ReadM SNP 0036.scaffold00137 400077 1 C T - ReadM SNP 0036.scaffold00137 401221 1 C T - ScafM SNP 0036.scaffold00137 402135 1 A G scaffold187 ReadM SNP 0036.scaffold00137 403418 1 G A - Both SNP 0036.scaffold00137 404841 1 A G scaffold187 ReadM SNP 0036.scaffold00137 405432 1 C T - Both SNP 0036.scaffold00137 405863 1 T C scaffold187 Both SNP 0036.scaffold00137 405869 1 C T scaffold187 Both SNP 0036.scaffold00137 406501 1 A G scaffold187 Both SNP 0036.scaffold00137 406545 1 T A scaffold187 ReadM INDEL 0036.scaffold00137 411177 1 A . - ScafM INDEL 0036.scaffold00137 412880 1 . A scaffold2348 ScafM SNP 0036.scaffold00137 413074 1 T C scaffold2348 ScafM INDEL 0036.scaffold00137 413160 2 TT .. scaffold2348 ScafM SNP 0036.scaffold00137 413167 1 A C scaffold2348 ScafM SNP 0036.scaffold00137 413192 1 T C scaffold2348 ScafM SNP 0036.scaffold00137 413204 1 G A scaffold2348 ScafM SNP 0036.scaffold00137 413232 1 T C scaffold2348 ScafM INDEL 0036.scaffold00137 413235 2 TT .. scaffold2348 ScafM SNP 0036.scaffold00137 413258 1 T G scaffold2348 ScafM SNP 0036.scaffold00137 413282 1 G C scaffold2348 ScafM SNP 0036.scaffold00137 413305 2 GA AT scaffold2348 ScafM SNP 0036.scaffold00137 413369 1 G A scaffold2348 ScafM INDEL 0036.scaffold00137 413415 5 TGGTA ..... scaffold2348 ScafM SNP 0036.scaffold00137 413541 1 C T scaffold2348 ScafM SNP 0036.scaffold00137 413653 1 A G scaffold2348 ScafM SNP 0036.scaffold00137 413740 1 A T scaffold2348 ScafM SNP 0036.scaffold00137 417344 1 A T scaffold187 ScafM SNP 0036.scaffold00137 417347 1 T C scaffold187 ScafM INDEL 0036.scaffold00137 418322 4 CCCA .... scaffold187 Both SNP 0036.scaffold00137 421744 1 A G scaffold187 Both SNP 0036.scaffold00137 423109 1 A G scaffold187 ScafM INDEL 0036.scaffold00137 423354 1 . A scaffold187 ScafM INDEL 0036.scaffold00137 424346 3 ... AAA scaffold187 Both SNP 0036.scaffold00137 426310 1 G A scaffold187 ScafM INDEL 0036.scaffold00137 426800 6 ...... GAAAAA scaffold187 ScafM SNP 0036.scaffold00137 426809 1 T A scaffold187 ReadM SNP 0036.scaffold00137 427280 1 A T - ScafM SNP 0036.scaffold00137 427400 1 A G scaffold187 ScafM SNP 0036.scaffold00137 427405 1 T C scaffold187 ScafM INDEL 0036.scaffold00137 427436 33 ................................. CAAAAAAAAAAAATATTTCACTTTTAAGGACCT scaffold187 ScafM SNP 0036.scaffold00137 427541 1 A C scaffold187 ScafM SNP 0036.scaffold00137 427561 1 A C scaffold187 ScafM SNP 0036.scaffold00137 427621 1 G A scaffold187 ScafM INDEL 0036.scaffold00137 427717 27 ATTTTTGGGAGAAAAAAAATATTTGTA ........................... scaffold187 Both SNP 0036.scaffold00137 428747 1 T C scaffold187 Both SNP 0036.scaffold00137 428921 1 T A scaffold187 ReadM SNP 0036.scaffold00137 429325 1 G A - ReadM SNP 0036.scaffold00137 429659 1 C G - ReadM SNP 0036.scaffold00137 429780 1 A G - ReadM SNP 0036.scaffold00137 430120 1 T C - ReadM SNP 0036.scaffold00137 430257 1 T A - ReadM SNP 0036.scaffold00137 430657 1 G T - ReadM SNP 0036.scaffold00137 431110 1 G A - ScafM SNP 0036.scaffold00137 432006 1 A G scaffold187 ReadM SNP 0036.scaffold00137 432515 1 A G - ReadM SNP 0036.scaffold00137 434055 1 T C - Both SNP 0036.scaffold00137 434465 1 A T scaffold187 Both SNP 0036.scaffold00137 434947 1 C T scaffold187 ScafM INDEL 0036.scaffold00137 435157 1 . T scaffold187 Both SNP 0036.scaffold00137 435174 1 T C scaffold187 Both SNP 0036.scaffold00137 435466 1 C A scaffold187 Both SNP 0036.scaffold00137 435828 1 C T scaffold187 ScafM SNP 0036.scaffold00137 436672 2 GA AT scaffold187 Both SNP 0036.scaffold00137 436936 1 T C scaffold187 Both SNP 0036.scaffold00137 437653 1 C A scaffold187 Both SNP 0036.scaffold00137 437695 1 A C scaffold187 ScafM SNP 0036.scaffold00137 437949 1 A C scaffold187 ScafM SNP 0036.scaffold00137 438055 1 T G scaffold187 ScafM INDEL 0036.scaffold00137 438910 1 T . scaffold187 ReadM SNP 0036.scaffold00137 440862 1 T A - ReadM SNP 0036.scaffold00137 442336 1 C T - ReadM SNP 0036.scaffold00137 442419 1 A G - ReadM SNP 0036.scaffold00137 442591 1 G A - ReadM SNP 0036.scaffold00137 442749 1 T C - ReadM SNP 0036.scaffold00137 443384 1 A G - ReadM SNP 0036.scaffold00137 443474 1 T C - ReadM SNP 0036.scaffold00137 443604 1 T C - ReadM INDEL 0036.scaffold00137 443916 1 T . - ScafM INDEL 0036.scaffold00137 444171 1 . A scaffold187 Both SNP 0036.scaffold00137 444412 1 T A scaffold187 Both INDEL 0036.scaffold00137 444419 1 . T scaffold187 Both SNP 0036.scaffold00137 445195 1 A G scaffold187 Both SNP 0036.scaffold00137 445454 1 T G scaffold187 Both INDEL 0036.scaffold00137 445686 1 . T scaffold187 Both SNP 0036.scaffold00137 446265 1 A G scaffold187 Both INDEL 0036.scaffold00137 446531 1 . T scaffold187 Both SNP 0036.scaffold00137 446762 1 T C scaffold187 Both SNP 0036.scaffold00137 447058 1 G A scaffold187 Both SNP 0036.scaffold00137 447228 1 A T scaffold187 ScafM SNP 0036.scaffold00137 447682 2 AA TT scaffold187 Both SNP 0036.scaffold00137 447704 1 G A scaffold187 ReadM SNP 0036.scaffold00137 448610 1 C T - ScafM INDEL 0036.scaffold00137 449256 2 .. AT scaffold187 Both SNP 0036.scaffold00137 449769 1 T C scaffold187 Both SNP 0036.scaffold00137 450754 1 A T scaffold187 Both SNP 0036.scaffold00137 452191 1 A G scaffold187 Both SNP 0036.scaffold00137 452235 1 C T scaffold187 Both INDEL 0036.scaffold00137 453703 1 G . scaffold187 ScafM SNP 0036.scaffold00137 453705 1 T A scaffold187 ReadM SNP 0036.scaffold00137 453947 1 C T - Both SNP 0036.scaffold00137 454247 1 T A scaffold187 Both SNP 0036.scaffold00137 454637 1 C T scaffold187 Both SNP 0036.scaffold00137 456070 1 G T scaffold187 Both SNP 0036.scaffold00137 457063 1 G A scaffold187 Both SNP 0036.scaffold00137 457099 1 A G scaffold187 Both SNP 0036.scaffold00137 457384 1 C T scaffold187 Both SNP 0036.scaffold00137 457826 1 G C scaffold187 ReadM SNP 0036.scaffold00137 458030 1 T C - Both INDEL 0036.scaffold00137 458136 1 T . scaffold187 Both SNP 0036.scaffold00137 458349 1 C T scaffold187 ReadM SNP 0036.scaffold00137 459130 1 T G - ReadM SNP 0036.scaffold00137 460066 1 G A - ReadM SNP 0036.scaffold00137 460109 1 T A - ScafM SNP 0036.scaffold00137 461635 1 T C scaffold187 ScafM INDEL 0036.scaffold00137 461773 2 .. TT scaffold187 Both INDEL 0036.scaffold00137 462810 1 A . scaffold187 Both SNP 0036.scaffold00137 462955 1 A C scaffold187 Both SNP 0036.scaffold00137 463068 1 A G scaffold187 Both SNP 0036.scaffold00137 463532 1 G A scaffold187 ScafM SNP 0036.scaffold00137 463708 1 C T scaffold187 ReadM SNP 0036.scaffold00137 464243 1 C A - ReadM SNP 0036.scaffold00137 464666 1 C T - ScafM INDEL 0036.scaffold00137 465468 1 . C scaffold1835 ScafM INDEL 0036.scaffold00137 466074 1 T . scaffold1835 Both SNP 0036.scaffold00137 466115 1 A G scaffold1835 Both SNP 0036.scaffold00137 466595 1 A G scaffold1835 Both SNP 0036.scaffold00137 467250 1 G A scaffold1835 Both SNP 0036.scaffold00137 467493 1 C T scaffold1835 ScafM SNP 0036.scaffold00137 469360 1 C T scaffold1835 ScafM SNP 0036.scaffold00137 469433 1 G A scaffold1835 ScafM SNP 0036.scaffold00137 469982 1 C T scaffold1835 ReadM SNP 0036.scaffold00137 470337 1 A C - ReadM INDEL 0036.scaffold00137 470465 2 .. AT - Both INDEL 0036.scaffold00137 470624 3 ... TAT scaffold1835 Both SNP 0036.scaffold00137 471621 1 C T scaffold1835 Both SNP 0036.scaffold00137 471909 1 T G scaffold1835 Both SNP 0036.scaffold00137 472159 1 C T scaffold1835 Both SNP 0036.scaffold00137 472620 1 T A scaffold1835 ReadM INDEL 0036.scaffold00137 474084 1 T . - ReadM INDEL 0036.scaffold00137 474451 1 . A - Both SNP 0036.scaffold00137 474972 1 A T scaffold1835 Both SNP 0036.scaffold00137 475511 1 T C scaffold1835 Both SNP 0036.scaffold00137 476825 1 T C scaffold1835 Both SNP 0036.scaffold00137 477375 1 G A scaffold1835 ScafM INDEL 0036.scaffold00137 477805 1 A . scaffold1835 Both INDEL 0036.scaffold00137 477812 1 . T scaffold1835 Both SNP 0036.scaffold00137 477817 1 T C scaffold1835 Both SNP 0036.scaffold00137 477908 1 T A scaffold1835 Both SNP 0036.scaffold00137 478197 1 A G scaffold1835 ReadM SNP 0036.scaffold00137 478586 1 G T - ReadM SNP 0036.scaffold00137 481453 1 C A - Both SNP 0036.scaffold00137 481719 1 C A scaffold1835 Both SNP 0036.scaffold00137 481746 1 T C scaffold1835 Both SNP 0036.scaffold00137 482429 1 A G scaffold1835 Both SNP 0036.scaffold00137 482756 1 T C scaffold1835 Both INDEL 0036.scaffold00137 482975 1 T . scaffold1835 ScafM SNP 0036.scaffold00137 483550 1 A G scaffold1835 ReadM INDEL 0036.scaffold00137 484050 2 TT .. - ReadM SNP 0036.scaffold00137 484247 1 A T - Both SNP 0036.scaffold00137 484993 1 T A scaffold1835 Both SNP 0036.scaffold00137 485306 1 A T scaffold1835 Both SNP 0036.scaffold00137 485315 1 A G scaffold1835 ReadM SNP 0036.scaffold00137 487137 1 T C - Both SNP 0036.scaffold00137 487287 1 C T scaffold1835 ScafM SNP 0036.scaffold00137 487324 1 C G scaffold1835 Both SNP 0036.scaffold00137 487684 1 G A scaffold1835 Both SNP 0036.scaffold00137 487805 1 T C scaffold1835 ScafM SNP 0036.scaffold00137 487886 1 A T scaffold1835 ScafM INDEL 0036.scaffold00137 488272 1 T . scaffold1835 ScafM SNP 0036.scaffold00137 488343 1 C A scaffold1835 Both SNP 0036.scaffold00137 488354 1 C T scaffold1835 ScafM SNP 0036.scaffold00137 488447 1 T G scaffold1835 ScafM SNP 0036.scaffold00137 488642 1 G A scaffold1835 ScafM SNP 0036.scaffold00137 488658 1 G C scaffold1835 ScafM SNP 0036.scaffold00137 488757 1 C A scaffold1835 Both SNP 0036.scaffold00137 488907 1 C T scaffold1835 Both SNP 0036.scaffold00137 489085 1 C T scaffold1835 ReadM SNP 0036.scaffold00137 489849 1 C A - ReadM SNP 0036.scaffold00137 491515 1 G A - ReadM SNP 0036.scaffold00137 491875 1 T C - ScafM SNP 0036.scaffold00137 492771 1 G T scaffold1835 ScafM SNP 0036.scaffold00137 492807 1 A G scaffold1835 ScafM SNP 0036.scaffold00137 506670 1 G T scaffold1835 ReadM SNP 0036.scaffold00137 507372 1 C T - ReadM SNP 0036.scaffold00137 507614 1 C A - ReadM SNP 0036.scaffold00137 507783 1 A C - ReadM SNP 0036.scaffold00137 507806 1 T C - ReadM SNP 0036.scaffold00137 507914 1 T A - ReadM SNP 0036.scaffold00137 509340 1 G T - ReadM SNP 0036.scaffold00137 509445 1 C A - ReadM SNP 0036.scaffold00137 511505 1 G A - ReadM SNP 0036.scaffold00137 512007 1 C A - ReadM SNP 0036.scaffold00137 512022 1 T C - ReadM SNP 0036.scaffold00137 512508 1 A G - ReadM SNP 0036.scaffold00137 512799 1 C T - ReadM SNP 0036.scaffold00137 512970 1 C T - ReadM SNP 0036.scaffold00137 513008 1 A G - ReadM SNP 0036.scaffold00137 513211 1 C T - ReadM SNP 0036.scaffold00137 513476 1 G A - ReadM SNP 0036.scaffold00137 513958 1 A T - ReadM SNP 0036.scaffold00137 514099 1 T G - ReadM SNP 0036.scaffold00137 514899 1 C T - ScafM SNP 0036.scaffold00137 515791 1 G C scaffold9938 Both SNP 0036.scaffold00137 515913 1 A T scaffold9938 Both SNP 0036.scaffold00137 516047 1 C T scaffold9938 Both SNP 0036.scaffold00137 516136 1 C G scaffold9938 ReadM SNP 0036.scaffold00137 516973 1 C T - ReadM SNP 0036.scaffold00137 517033 1 T C - ReadM SNP 0036.scaffold00137 517215 1 T C - Both SNP 0036.scaffold00137 525845 1 T G scaffold9938 ScafM INDEL 0036.scaffold00137 525909 22 ...................... GGCCCGTGGACGTAGCCAAATT scaffold9938 ScafM INDEL 0036.scaffold00137 525932 11 ........... CTGCTTTATTG scaffold9938 Both SNP 0036.scaffold00137 527115 1 A T scaffold8108 ReadM SNP 0036.scaffold00137 527277 1 G A - ReadM SNP 0036.scaffold00137 527312 1 G T - Both INDEL 0036.scaffold00137 527810 1 . A scaffold8108 ReadM SNP 0036.scaffold00137 527993 1 G T - ReadM SNP 0036.scaffold00137 528077 1 G C - Both INDEL 0036.scaffold00137 529737 1 . T scaffold8108 ScafM SNP 0036.scaffold00137 530707 1 A C scaffold8108 ScafM SNP 0036.scaffold00137 530944 1 A C scaffold8108 ReadM INDEL 0036.scaffold00137 533129 1 G . - ReadM SNP 0036.scaffold00137 533628 1 T C - ScafM SNP 0036.scaffold00137 533859 1 T A scaffold8108 ReadM SNP 0036.scaffold00137 535386 1 A G - ReadM SNP 0036.scaffold00137 535461 1 G A - ReadM SNP 0036.scaffold00137 536029 1 T C - ReadM SNP 0036.scaffold00137 536104 1 G A - Both SNP 0036.scaffold00137 536515 1 G A scaffold8108 ReadM SNP 0036.scaffold00137 536834 1 A G - ReadM SNP 0036.scaffold00137 537327 1 T C - ScafM INDEL 0036.scaffold00137 538402 1 . T scaffold8108 ScafM INDEL 0036.scaffold00137 539899 8 AATGTGTG ........ scaffold8108 ReadM SNP 0036.scaffold00137 541087 1 G A - Both SNP 0036.scaffold00137 541407 1 T G scaffold8108 ScafM SNP 0036.scaffold00137 541732 1 A G scaffold8108 Both SNP 0036.scaffold00137 543021 1 A G scaffold8108 ReadM SNP 0036.scaffold00137 543291 1 T C - ReadM SNP 0036.scaffold00137 543512 1 C T - Both SNP 0036.scaffold00137 544785 1 G A scaffold8108 Both SNP 0036.scaffold00137 544818 1 T C scaffold8108 Both SNP 0036.scaffold00137 545005 1 A G scaffold8108 Both SNP 0036.scaffold00137 545041 1 C T scaffold8108 ReadM SNP 0036.scaffold00137 545060 1 G C - ReadM SNP 0036.scaffold00137 545345 1 A G - ReadM SNP 0036.scaffold00137 545380 1 A G - ScafM INDEL 0036.scaffold00137 545573 1 . T scaffold8108 ReadM SNP 0036.scaffold00137 546007 1 A C - ReadM SNP 0036.scaffold00137 546121 1 T C - ReadM SNP 0036.scaffold00137 546755 1 T C - ReadM SNP 0036.scaffold00137 546836 1 G C - ReadM SNP 0036.scaffold00137 547361 1 T C - ReadM SNP 0036.scaffold00137 547435 1 A T - ReadM SNP 0036.scaffold00137 547690 1 C A - ReadM SNP 0036.scaffold00137 547766 1 C G - ReadM SNP 0036.scaffold00137 547851 1 T G - ReadM SNP 0036.scaffold00137 547993 1 T A - ReadM SNP 0036.scaffold00137 550231 1 A G - ReadM SNP 0036.scaffold00137 550554 1 A C - ReadM SNP 0036.scaffold00137 550965 1 A C - ReadM SNP 0036.scaffold00137 551191 1 A G - ReadM INDEL 0036.scaffold00137 551195 1 . G - ReadM SNP 0036.scaffold00137 551270 1 G A - ReadM SNP 0036.scaffold00137 551704 1 T G - ReadM SNP 0036.scaffold00137 551955 1 C A - ReadM SNP 0036.scaffold00137 552243 1 C T - ReadM SNP 0036.scaffold00137 552506 1 T C - ReadM SNP 0036.scaffold00137 553192 1 T C - ReadM SNP 0036.scaffold00137 553301 1 C G - ReadM SNP 0036.scaffold00137 553361 1 A G - ReadM INDEL 0036.scaffold00137 553456 1 C . - ReadM SNP 0036.scaffold00137 553537 1 A G - ReadM SNP 0036.scaffold00137 553581 1 C T - ReadM SNP 0036.scaffold00137 553677 1 G A - ReadM SNP 0036.scaffold00137 554544 1 T C - ReadM SNP 0036.scaffold00137 554581 1 A T - ReadM SNP 0036.scaffold00137 554717 1 C T - ReadM INDEL 0036.scaffold00137 554954 1 . T - ReadM SNP 0036.scaffold00137 555062 1 C T - ReadM SNP 0036.scaffold00137 555768 1 C A - ReadM SNP 0036.scaffold00137 556525 1 T C - ReadM SNP 0036.scaffold00137 556614 1 T G - ReadM SNP 0036.scaffold00137 556704 1 C G - ReadM SNP 0036.scaffold00137 559610 1 G T - ReadM SNP 0036.scaffold00137 559923 1 C T - ReadM SNP 0036.scaffold00137 560189 1 T C - ReadM SNP 0036.scaffold00137 560571 1 C T - ReadM SNP 0036.scaffold00137 561140 1 T C - ReadM SNP 0036.scaffold00137 561304 1 A G - ReadM SNP 0036.scaffold00137 561368 1 C T - ReadM SNP 0036.scaffold00137 562311 1 C A - ReadM SNP 0036.scaffold00137 563111 1 T G - ReadM SNP 0036.scaffold00137 563308 1 T C - ReadM SNP 0036.scaffold00137 563606 1 A G - Both SNP 0036.scaffold00137 566234 1 C T scaffold13320 Both INDEL 0036.scaffold00137 566348 1 . T scaffold13320 Both SNP 0036.scaffold00137 566390 1 C T scaffold13320 Both SNP 0036.scaffold00137 566504 1 C T scaffold13320 Both SNP 0036.scaffold00137 567047 1 C A scaffold13320 ScafM SNP 0036.scaffold00137 567202 1 G A scaffold13320 Both SNP 0036.scaffold00137 567446 1 G A scaffold13320 ScafM INDEL 0036.scaffold00137 567698 1 C . scaffold4497 ScafM INDEL 0036.scaffold00137 567702 1 G . scaffold4497 ScafM SNP 0036.scaffold00137 567826 1 G T scaffold4497 ScafM SNP 0036.scaffold00137 567843 1 C T scaffold4497 ScafM SNP 0036.scaffold00137 567862 1 C T scaffold4497 ScafM INDEL 0036.scaffold00137 567869 1 A . scaffold4497 ScafM SNP 0036.scaffold00137 567880 1 T A scaffold4497 ScafM SNP 0036.scaffold00137 567899 1 C T scaffold4497 ScafM SNP 0036.scaffold00137 567934 1 A G scaffold4497 ScafM SNP 0036.scaffold00137 567960 2 AA GG scaffold4497 ReadM SNP 0036.scaffold00137 568250 1 T C - ReadM SNP 0036.scaffold00137 568338 1 T G - ReadM SNP 0036.scaffold00137 568483 1 T A - ReadM SNP 0036.scaffold00137 568954 1 T A - ReadM SNP 0036.scaffold00137 569046 1 T G - ReadM SNP 0036.scaffold00137 570919 1 G C - ReadM SNP 0036.scaffold00137 570926 1 C T - ReadM SNP 0036.scaffold00137 571544 1 T C - ReadM INDEL 0036.scaffold00137 572424 1 T . - ReadM SNP 0036.scaffold00137 572917 1 A G - ReadM SNP 0036.scaffold00137 573060 1 T C - ReadM SNP 0036.scaffold00137 574962 1 A G - ReadM SNP 0036.scaffold00137 575050 1 T C - ReadM SNP 0036.scaffold00137 575457 1 A T - ReadM SNP 0036.scaffold00137 576394 2 TT CC - ReadM SNP 0036.scaffold00137 577169 1 T G - ReadM SNP 0036.scaffold00137 577286 1 A G - ReadM SNP 0036.scaffold00137 577690 1 G A - ReadM SNP 0036.scaffold00137 577773 1 G T - ReadM SNP 0036.scaffold00137 577913 1 A T - ReadM SNP 0036.scaffold00137 578545 1 G A - ReadM SNP 0036.scaffold00137 578716 1 A G - ReadM SNP 0036.scaffold00137 578938 1 C T - ReadM SNP 0036.scaffold00137 579297 1 G A - ReadM SNP 0036.scaffold00137 579628 1 T C - Both SNP 0036.scaffold00137 581821 1 C A scaffold6375 Both SNP 0036.scaffold00137 581940 1 T C scaffold6375 ReadM INDEL 0036.scaffold00137 582133 1 . A - ReadM SNP 0036.scaffold00137 583453 1 T G - ReadM SNP 0036.scaffold00137 583497 1 G T - ReadM SNP 0036.scaffold00137 583697 1 G A - ReadM SNP 0036.scaffold00137 583738 1 G T - Both SNP 0036.scaffold00137 585233 1 T C scaffold6375 ReadM SNP 0036.scaffold00137 585346 1 C A - ScafM INDEL 0036.scaffold00137 585394 1 . C scaffold6375 Both SNP 0036.scaffold00137 585868 1 T C scaffold6375 ScafM SNP 0036.scaffold00137 586073 1 A G scaffold6375 ReadM INDEL 0036.scaffold00137 586286 1 . A - Both SNP 0036.scaffold00137 586769 1 A G scaffold6375 ReadM SNP 0036.scaffold00137 587490 1 A G - ScafM INDEL 0036.scaffold00137 587616 1 T . scaffold6375 ScafM SNP 0036.scaffold00137 587630 1 A C scaffold6375 Both SNP 0036.scaffold00137 587840 1 C T scaffold6375 ReadM SNP 0036.scaffold00137 588901 1 C T - ScafM INDEL 0036.scaffold00137 589191 1 A . scaffold6375 Both SNP 0036.scaffold00137 589351 1 C T scaffold6375 ReadM SNP 0036.scaffold00137 589614 1 A G - ScafM INDEL 0036.scaffold00137 591937 1 A . scaffold6375 Both SNP 0036.scaffold00137 592232 1 T C scaffold6375 ScafM SNP 0036.scaffold00137 592261 1 A C scaffold6375 ScafM INDEL 0036.scaffold00137 592303 4 ATCG .... scaffold6375 Both INDEL 0036.scaffold00137 592392 1 G . scaffold6375 ReadM SNP 0036.scaffold00137 594693 1 A T - ReadM SNP 0036.scaffold00137 595200 1 A G - ReadM SNP 0036.scaffold00137 595649 1 T A - ReadM SNP 0036.scaffold00137 596596 1 C T - ReadM INDEL 0036.scaffold00137 597255 1 A . - ReadM SNP 0036.scaffold00137 599238 1 A G - ReadM SNP 0036.scaffold00137 599770 1 G A - ReadM SNP 0036.scaffold00137 600025 1 A T - ReadM SNP 0036.scaffold00137 602315 1 C G - ReadM SNP 0036.scaffold00137 602382 1 T A - Both SNP 0036.scaffold00137 602491 1 G T scaffold6375 ReadM SNP 0036.scaffold00137 607885 1 C T - ReadM SNP 0036.scaffold00137 607950 1 T C - ReadM SNP 0036.scaffold00137 608696 1 T C - ReadM SNP 0036.scaffold00137 608961 1 G A - ReadM SNP 0036.scaffold00137 608989 1 G A - ReadM SNP 0036.scaffold00137 609696 1 A T - ReadM INDEL 0036.scaffold00137 609802 1 T . - ReadM SNP 0036.scaffold00137 610010 1 C A - ReadM SNP 0036.scaffold00137 610298 1 T G - Both SNP 0036.scaffold00137 611039 1 C G scaffold6024 Both SNP 0036.scaffold00137 612179 1 A C scaffold6024 ScafM INDEL 0036.scaffold00137 612708 1 . A scaffold6024 ScafM SNP 0036.scaffold00137 614494 1 C T scaffold6024 ReadM SNP 0036.scaffold00137 615576 1 A G - ReadM SNP 0036.scaffold00137 616571 1 G A - ReadM SNP 0036.scaffold00137 616777 1 T C - ReadM SNP 0036.scaffold00137 617431 1 G A - ReadM INDEL 0036.scaffold00137 618389 1 A . - ReadM SNP 0036.scaffold00137 618568 1 G A - ScafM SNP 0036.scaffold00137 620475 1 C T scaffold6024 Both SNP 0036.scaffold00137 621012 1 G A scaffold6024 ReadM SNP 0036.scaffold00137 621166 1 C T - ScafM SNP 0036.scaffold00137 621859 1 T C scaffold6024 Both SNP 0036.scaffold00137 622093 1 A C scaffold6024 Both SNP 0036.scaffold00137 622201 1 T C scaffold6024 ScafM INDEL 0036.scaffold00137 622584 3 ... AAA scaffold6024 ScafM SNP 0036.scaffold00137 622599 1 C T scaffold6024 Both SNP 0036.scaffold00137 623400 1 A T scaffold6024 ReadM SNP 0036.scaffold00137 627825 1 G A - ReadM SNP 0036.scaffold00137 627832 1 G A - ReadM SNP 0036.scaffold00137 628232 1 T C - ReadM SNP 0036.scaffold00137 628315 1 A G - ReadM SNP 0036.scaffold00137 629204 1 A G - ReadM SNP 0036.scaffold00137 631890 1 T A - ReadM SNP 0036.scaffold00137 636399 1 A T - Both SNP 0036.scaffold00137 636482 1 A T scaffold350 ReadM SNP 0036.scaffold00137 636755 1 T C - ReadM SNP 0036.scaffold00137 636954 1 G A - Both SNP 0036.scaffold00137 637118 1 C T scaffold350 ScafM SNP 0036.scaffold00137 637296 1 T G scaffold350 ScafM SNP 0036.scaffold00137 637299 1 T G scaffold350 ScafM SNP 0036.scaffold00137 637325 1 T A scaffold350 ScafM INDEL 0036.scaffold00137 637329 1 T . scaffold350 ScafM INDEL 0036.scaffold00137 637357 1 A . scaffold350 ScafM SNP 0036.scaffold00137 637374 1 G C scaffold350 Both INDEL 0036.scaffold00137 637416 1 . T scaffold350 ScafM SNP 0036.scaffold00137 637651 1 C T scaffold350 ScafM SNP 0036.scaffold00137 637654 1 C T scaffold350 ScafM SNP 0036.scaffold00137 637708 1 G C scaffold350 ScafM SNP 0036.scaffold00137 637737 1 C T scaffold350 ScafM SNP 0036.scaffold00137 637812 1 T A scaffold350 ScafM SNP 0036.scaffold00137 637828 1 G A scaffold350 ScafM SNP 0036.scaffold00137 637842 1 C T scaffold350 ScafM SNP 0036.scaffold00137 637906 1 A T scaffold350 ScafM SNP 0036.scaffold00137 637916 1 T C scaffold350 ScafM SNP 0036.scaffold00137 637920 1 A C scaffold350 ScafM SNP 0036.scaffold00137 637930 1 A G scaffold350 ScafM SNP 0036.scaffold00137 637948 3 AAC CTT scaffold350 ScafM INDEL 0036.scaffold00137 637952 2 .. AC scaffold350 ScafM SNP 0036.scaffold00137 638062 1 T A scaffold350 ScafM INDEL 0036.scaffold00137 638066 1 . C scaffold350 ScafM INDEL 0036.scaffold00137 638356 1 A . scaffold350 ScafM SNP 0036.scaffold00137 638376 1 A T scaffold350 ScafM SNP 0036.scaffold00137 638384 1 C A scaffold350 ScafM SNP 0036.scaffold00137 638393 1 T G scaffold350 ScafM SNP 0036.scaffold00137 638402 1 C T scaffold350 ScafM INDEL 0036.scaffold00137 638407 1 . A scaffold350 ScafM SNP 0036.scaffold00137 638415 1 C A scaffold350 ScafM SNP 0036.scaffold00137 638425 1 T G scaffold350 ScafM SNP 0036.scaffold00137 638431 1 G T scaffold350 ScafM SNP 0036.scaffold00137 638479 1 G A scaffold350 ScafM SNP 0036.scaffold00137 638520 1 G A scaffold350 ScafM SNP 0036.scaffold00137 638989 1 A G scaffold350 ScafM SNP 0036.scaffold00137 639179 1 C T scaffold350 Both SNP 0036.scaffold00137 639332 1 T A scaffold350 ScafM SNP 0036.scaffold00137 639358 1 G A scaffold350 ScafM SNP 0036.scaffold00137 639369 1 A T scaffold350 ScafM SNP 0036.scaffold00137 639442 1 C T scaffold350 Both SNP 0036.scaffold00137 639638 1 G T scaffold350 ScafM SNP 0036.scaffold00137 639652 1 A G scaffold350 ScafM SNP 0036.scaffold00137 639687 1 C G scaffold350 ScafM SNP 0036.scaffold00137 639720 2 CC AT scaffold350 ScafM SNP 0036.scaffold00137 639746 3 AAG TTT scaffold350 ScafM SNP 0036.scaffold00137 639751 1 T C scaffold350 ScafM SNP 0036.scaffold00137 639831 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641368 1 C A scaffold350 ScafM SNP 0036.scaffold00137 641386 1 T C scaffold350 ScafM SNP 0036.scaffold00137 641391 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641424 1 G A scaffold350 ScafM SNP 0036.scaffold00137 641429 1 T C scaffold350 ScafM SNP 0036.scaffold00137 641456 1 G A scaffold350 ScafM INDEL 0036.scaffold00137 641464 2 .. TG scaffold350 ScafM SNP 0036.scaffold00137 641495 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641499 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641509 1 G T scaffold350 ScafM SNP 0036.scaffold00137 641548 1 T C scaffold350 ScafM SNP 0036.scaffold00137 641587 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641622 1 A G scaffold350 ScafM INDEL 0036.scaffold00137 641631 3 ... ATA scaffold350 ScafM SNP 0036.scaffold00137 641646 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641688 1 C T scaffold350 ScafM INDEL 0036.scaffold00137 641697 2 .. TC scaffold350 ScafM SNP 0036.scaffold00137 641699 1 T C scaffold350 ScafM SNP 0036.scaffold00137 641721 1 A G scaffold350 ScafM SNP 0036.scaffold00137 641726 1 C T scaffold350 ScafM SNP 0036.scaffold00137 641729 1 A C scaffold350 Both SNP 0036.scaffold00137 641757 1 A G scaffold350 Both SNP 0036.scaffold00137 641781 1 C G scaffold350 Both SNP 0036.scaffold00137 641840 1 C A scaffold350 Both SNP 0036.scaffold00137 641865 1 C A scaffold350 Both SNP 0036.scaffold00137 641928 1 C T scaffold350 Both SNP 0036.scaffold00137 642009 1 T C scaffold350 ScafM INDEL 0036.scaffold00137 642055 8 AATTATAG ........ scaffold350 ScafM INDEL 0036.scaffold00137 642066 6 AATACT ...... scaffold350 ScafM SNP 0036.scaffold00137 642076 1 G A scaffold350 Both SNP 0036.scaffold00137 642364 1 T C scaffold350 ReadM SNP 0036.scaffold00137 642517 1 T C - ReadM SNP 0036.scaffold00137 642531 1 G C - ReadM SNP 0036.scaffold00137 642647 1 G A - Both SNP 0036.scaffold00137 642968 1 A T scaffold350 ScafM INDEL 0036.scaffold00137 643066 1 C . scaffold350 ScafM INDEL 0036.scaffold00137 643163 2 TT .. scaffold350 ScafM SNP 0036.scaffold00137 643196 2 TT GC scaffold350 ScafM SNP 0036.scaffold00137 643214 1 G A scaffold350 ReadM SNP 0036.scaffold00137 643679 1 C T - ReadM SNP 0036.scaffold00137 643730 1 T G - ScafM SNP 0036.scaffold00137 643953 1 C T scaffold350 ScafM SNP 0036.scaffold00137 643979 1 A G scaffold350 ScafM SNP 0036.scaffold00137 643999 1 G C scaffold350 ScafM INDEL 0036.scaffold00137 644020 9 TTTCAAAAT ......... scaffold350 ScafM INDEL 0036.scaffold00137 644033 12 TGTAAATTTACG ............ scaffold350 ScafM SNP 0036.scaffold00137 644070 1 A G scaffold350 ScafM SNP 0036.scaffold00137 644074 1 A T scaffold350 ScafM INDEL 0036.scaffold00137 644104 2 .. TA scaffold350 ScafM SNP 0036.scaffold00137 644116 2 TA AC scaffold350 ScafM SNP 0036.scaffold00137 644132 1 C T scaffold350 ScafM SNP 0036.scaffold00137 644150 1 T C scaffold350 ScafM SNP 0036.scaffold00137 644153 1 T A scaffold350 ScafM SNP 0036.scaffold00137 644315 1 C G scaffold350 ScafM SNP 0036.scaffold00137 644345 1 G T scaffold350 Both INDEL 0036.scaffold00137 644532 2 .. AT scaffold350 Both SNP 0036.scaffold00137 644919 1 T A scaffold350 ScafM SNP 0036.scaffold00137 644995 2 AT TC scaffold350 ScafM SNP 0036.scaffold00137 645034 2 TG CA scaffold350 Both SNP 0036.scaffold00137 645234 1 T C scaffold350 Both SNP 0036.scaffold00137 645253 1 C T scaffold350 Both SNP 0036.scaffold00137 645378 1 T A scaffold350 ScafM SNP 0036.scaffold00137 646160 1 G A scaffold350 ReadM INDEL 0036.scaffold00137 646298 1 T . - ReadM SNP 0036.scaffold00137 646332 1 T G - Both INDEL 0036.scaffold00137 647237 1 . A scaffold350 Both SNP 0036.scaffold00137 648631 1 T C scaffold350 ReadM SNP 0036.scaffold00137 649306 1 T A - Both SNP 0036.scaffold00137 650520 1 A T scaffold350 ReadM SNP 0036.scaffold00137 650666 1 G A - ReadM SNP 0036.scaffold00137 651783 1 A G - ReadM SNP 0036.scaffold00137 652022 1 T A - ReadM INDEL 0036.scaffold00137 653058 1 . G - ReadM SNP 0036.scaffold00137 653399 1 C G - ReadM SNP 0036.scaffold00137 653507 1 T C - ReadM SNP 0036.scaffold00137 653645 1 C G - ReadM SNP 0036.scaffold00137 654088 1 C T - ReadM SNP 0036.scaffold00137 654429 1 T C - ReadM SNP 0036.scaffold00137 654990 1 G A - ReadM SNP 0036.scaffold00137 656644 1 T G - ReadM SNP 0036.scaffold00137 656894 1 T C - Both SNP 0036.scaffold00137 657715 1 C T scaffold350 Both INDEL 0036.scaffold00137 657850 1 . A scaffold350 ReadM SNP 0036.scaffold00137 658237 1 T G - ReadM SNP 0036.scaffold00137 658570 1 G A - ReadM SNP 0036.scaffold00137 658580 1 G A - ScafM SNP 0036.scaffold00137 658811 1 T A scaffold350 ScafM SNP 0036.scaffold00137 658813 1 C A scaffold350 ScafM INDEL 0036.scaffold00137 658815 13 ............. AAATTTTTTTTTT scaffold350 ScafM SNP 0036.scaffold00137 658817 1 G T scaffold350 ScafM SNP 0036.scaffold00137 658819 1 C T scaffold350 ReadM SNP 0036.scaffold00137 659610 1 A T - Both SNP 0036.scaffold00137 659655 1 T G scaffold350 Both SNP 0036.scaffold00137 659825 1 C T scaffold350 Both SNP 0036.scaffold00137 659870 1 A G scaffold350 Both SNP 0036.scaffold00137 659951 1 T C scaffold350 Both SNP 0036.scaffold00137 659994 1 C A scaffold350 Both SNP 0036.scaffold00137 660094 1 G C scaffold350 Both SNP 0036.scaffold00137 660124 1 A G scaffold350 Both SNP 0036.scaffold00137 660323 1 A G scaffold350 ScafM SNP 0036.scaffold00137 660337 1 A G scaffold350 ScafM SNP 0036.scaffold00137 660339 1 G A scaffold350 Both SNP 0036.scaffold00137 660408 1 C T scaffold350 Both SNP 0036.scaffold00137 660516 1 G C scaffold350 Both INDEL 0036.scaffold00137 660522 1 G . scaffold350 ReadM SNP 0036.scaffold00137 663460 1 G A - ScafM SNP 0036.scaffold00137 664573 2 AT TC scaffold350 Both SNP 0036.scaffold00137 665925 1 G C scaffold350 Both SNP 0036.scaffold00137 666348 1 T A scaffold350 Both SNP 0036.scaffold00137 666401 1 G T scaffold350 ScafM SNP 0036.scaffold00137 667666 1 T A scaffold350 ScafM INDEL 0036.scaffold00137 667703 1 . G scaffold350 ScafM SNP 0036.scaffold00137 668723 2 GA CT scaffold350 ScafM INDEL 0036.scaffold00137 671627 1 A . scaffold350 ReadM SNP 0036.scaffold00137 671803 1 A G - ReadM SNP 0036.scaffold00137 672169 1 T C - ScafM INDEL 0036.scaffold00137 673498 5 ..... GATGG scaffold350 Both INDEL 0036.scaffold00137 673581 1 A . scaffold350 Both INDEL 0036.scaffold00137 674158 2 .. AT scaffold350 ReadM SNP 0036.scaffold00137 674928 1 G A - ReadM SNP 0036.scaffold00137 675546 1 A G - Both SNP 0036.scaffold00137 676212 1 A G scaffold350 Both INDEL 0036.scaffold00137 676228 1 T . scaffold350 ScafM SNP 0036.scaffold00137 676230 1 T C scaffold350 ScafM INDEL 0036.scaffold00137 676316 2 TC .. scaffold350 Both SNP 0036.scaffold00137 677223 1 T C scaffold350 ReadM SNP 0036.scaffold00137 678306 1 G A - ScafM SNP 0036.scaffold00137 678597 1 C T scaffold31060 ScafM SNP 0036.scaffold00137 678610 1 T C scaffold31060 ScafM SNP 0036.scaffold00137 678622 1 T A scaffold31060 ScafM SNP 0036.scaffold00137 678676 1 T G scaffold31060 ScafM SNP 0036.scaffold00137 678692 1 G A scaffold31060 ScafM INDEL 0036.scaffold00137 678695 2 TT .. scaffold31060 ScafM INDEL 0036.scaffold00137 678699 5 TAAGA ..... scaffold31060 ScafM INDEL 0036.scaffold00137 678754 2 .. TT scaffold31060 ScafM SNP 0036.scaffold00137 678765 1 G A scaffold31060 ScafM INDEL 0036.scaffold00137 678774 1 G . scaffold31060 ScafM SNP 0036.scaffold00137 678797 1 G T scaffold31060 ScafM INDEL 0036.scaffold00137 680015 5 ..... TTTTG scaffold350 Both SNP 0036.scaffold00137 680522 1 A T scaffold350 ReadM SNP 0036.scaffold00137 680826 1 C T - ReadM SNP 0036.scaffold00137 682292 1 A G - ReadM SNP 0036.scaffold00137 682474 1 A C - Both SNP 0036.scaffold00137 683883 1 T C scaffold350 Both SNP 0036.scaffold00137 683989 1 A C scaffold350 ReadM SNP 0036.scaffold00137 684497 1 A G - ReadM SNP 0036.scaffold00137 687461 1 G A - ReadM SNP 0036.scaffold00137 687604 1 T A - ReadM INDEL 0036.scaffold00137 687976 1 G . - ReadM SNP 0036.scaffold00137 688410 1 T C - ReadM SNP 0036.scaffold00137 688754 1 G C - ReadM SNP 0036.scaffold00137 689331 1 C A - ReadM SNP 0036.scaffold00137 689931 1 T C - ReadM SNP 0036.scaffold00137 689959 1 C T - ReadM SNP 0036.scaffold00137 690473 1 T A - ReadM SNP 0036.scaffold00137 691644 1 G A - ReadM SNP 0036.scaffold00137 693797 1 A G - ReadM SNP 0036.scaffold00137 693893 1 A G - ReadM INDEL 0036.scaffold00137 698230 1 A . - ReadM SNP 0036.scaffold00137 701845 1 C T - ReadM SNP 0036.scaffold00137 702199 1 G A - ReadM SNP 0036.scaffold00137 702284 1 A C - ReadM SNP 0036.scaffold00137 702338 1 T G - ReadM SNP 0036.scaffold00137 703777 1 A G - ScafM SNP 0036.scaffold00137 706163 1 A T scaffold10228 ReadM SNP 0036.scaffold00137 706593 1 T C - ReadM SNP 0036.scaffold00137 706716 1 G A - ReadM SNP 0036.scaffold00137 707139 1 A T - Both SNP 0036.scaffold00137 707234 1 G A scaffold10228 Both SNP 0036.scaffold00137 707536 1 C T scaffold10228 ReadM SNP 0036.scaffold00137 708457 1 T C - ReadM SNP 0036.scaffold00137 709433 1 G A - ReadM SNP 0036.scaffold00137 709711 1 C G - ReadM SNP 0036.scaffold00137 709930 1 C A - ReadM SNP 0036.scaffold00137 710756 1 G A - ReadM INDEL 0036.scaffold00137 711201 2 AG .. - ReadM SNP 0036.scaffold00137 711692 1 T C - ReadM SNP 0036.scaffold00137 711823 1 T C - ReadM SNP 0036.scaffold00137 711968 1 A G - ReadM SNP 0036.scaffold00137 712638 1 C T - ReadM SNP 0036.scaffold00137 712667 1 G A - ReadM SNP 0036.scaffold00137 712722 1 G A - ReadM SNP 0036.scaffold00137 712925 1 G A - ReadM SNP 0036.scaffold00137 712945 1 G A - ReadM SNP 0036.scaffold00137 713890 1 G A - ReadM SNP 0036.scaffold00137 713990 1 C T - Both SNP 0036.scaffold00137 714080 1 T C scaffold10228 Both SNP 0036.scaffold00137 715034 1 G T scaffold10228 Both SNP 0036.scaffold00137 715859 1 G T scaffold10228 Both SNP 0036.scaffold00137 717375 1 T C scaffold10228 Both SNP 0036.scaffold00137 717876 1 C G scaffold10228 ReadM SNP 0036.scaffold00137 718632 1 G A - ReadM SNP 0036.scaffold00137 719527 1 C A - ReadM SNP 0036.scaffold00137 719665 1 A G - ReadM SNP 0036.scaffold00137 719673 1 C A - ReadM SNP 0036.scaffold00137 720572 1 A G - Both SNP 0036.scaffold00137 722166 1 C T scaffold10228 ReadM SNP 0036.scaffold00137 723356 1 A T - Both SNP 0036.scaffold00137 723866 1 T C scaffold10228 Both SNP 0036.scaffold00137 723926 1 A T scaffold10228 Both SNP 0036.scaffold00137 724082 1 T C scaffold10228 Both SNP 0036.scaffold00137 724145 1 A T scaffold10228 Both SNP 0036.scaffold00137 724183 1 C G scaffold10228 Both SNP 0036.scaffold00137 724240 1 A T scaffold10228 Both SNP 0036.scaffold00137 724376 1 T C scaffold10228 ScafM INDEL 0036.scaffold00137 724418 1 . T scaffold10228 Both SNP 0036.scaffold00137 724420 1 G T scaffold10228 ReadM SNP 0036.scaffold00137 724533 1 G A - ReadM SNP 0036.scaffold00137 724579 1 T C - ReadM SNP 0036.scaffold00137 724589 1 T C - ReadM SNP 0036.scaffold00137 724597 1 A T - ReadM SNP 0036.scaffold00137 724665 1 T C - ReadM SNP 0036.scaffold00137 724687 1 A G - ReadM SNP 0036.scaffold00137 724691 1 C T - ReadM SNP 0036.scaffold00137 724818 1 T C - Both SNP 0036.scaffold00137 724969 1 T C scaffold10228 Both SNP 0036.scaffold00137 725048 1 A T scaffold10228 ReadM INDEL 0036.scaffold00137 725058 1 . T - ReadM SNP 0036.scaffold00137 725237 1 A G - Both SNP 0036.scaffold00137 725341 1 G A scaffold10228 ScafM INDEL 0036.scaffold00137 725828 4 GTAA .... scaffold10228 ScafM INDEL 0036.scaffold00137 725941 1 . A scaffold10228 Both SNP 0036.scaffold00137 726149 1 T C scaffold10228 Both SNP 0036.scaffold00137 726263 1 G C scaffold10228 Both SNP 0036.scaffold00137 726465 1 A G scaffold10228 Both SNP 0036.scaffold00137 726472 1 G A scaffold10228 ScafM INDEL 0036.scaffold00137 726608 1 . C scaffold10228 ScafM INDEL 0036.scaffold00137 726609 5 ..... CCATA scaffold10228 ScafM INDEL 0036.scaffold00137 726613 3 ... CTT scaffold10228 ScafM INDEL 0036.scaffold00137 726614 3 ... GGA scaffold10228 ScafM SNP 0036.scaffold00137 726647 1 G A scaffold10228 ScafM SNP 0036.scaffold00137 726699 1 T G scaffold10228 ScafM SNP 0036.scaffold00137 726710 1 A G scaffold10228 ScafM SNP 0036.scaffold00137 726748 1 A C scaffold10228 ScafM SNP 0036.scaffold00137 726753 1 A G scaffold10228 ScafM SNP 0036.scaffold00137 726758 1 A G scaffold10228 ScafM SNP 0036.scaffold00137 726786 1 A G scaffold10228 ScafM SNP 0036.scaffold00137 726790 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 726799 1 C T scaffold10228 ScafM INDEL 0036.scaffold00137 726803 1 . T scaffold10228 ScafM INDEL 0036.scaffold00137 726806 1 A . scaffold10228 ScafM SNP 0036.scaffold00137 726823 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 726836 1 C T scaffold10228 ScafM INDEL 0036.scaffold00137 726863 12 ............ GCAACGACTTTA scaffold10228 ScafM SNP 0036.scaffold00137 726867 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 726905 1 G C scaffold10228 ScafM SNP 0036.scaffold00137 726919 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 726925 2 TG GC scaffold10228 ScafM SNP 0036.scaffold00137 726933 1 A T scaffold10228 Both SNP 0036.scaffold00137 726994 1 A G scaffold10228 Both SNP 0036.scaffold00137 727006 1 G T scaffold10228 ScafM INDEL 0036.scaffold00137 727102 1 A . scaffold10228 ScafM SNP 0036.scaffold00137 727110 1 T A scaffold10228 ScafM SNP 0036.scaffold00137 727134 1 T G scaffold10228 ScafM SNP 0036.scaffold00137 727144 1 T C scaffold10228 Both INDEL 0036.scaffold00137 727201 1 . G scaffold10228 ScafM SNP 0036.scaffold00137 727203 1 G A scaffold10228 Both SNP 0036.scaffold00137 727215 1 A G scaffold10228 ScafM SNP 0036.scaffold00137 727393 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 727402 1 T C scaffold10228 ScafM SNP 0036.scaffold00137 727404 1 C A scaffold10228 ScafM SNP 0036.scaffold00137 727424 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 727436 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 727445 1 G T scaffold10228 ScafM SNP 0036.scaffold00137 727467 1 T C scaffold10228 ReadM SNP 0036.scaffold00137 727566 1 C T - ReadM SNP 0036.scaffold00137 727665 1 G A - ReadM SNP 0036.scaffold00137 727677 1 G A - Both SNP 0036.scaffold00137 727735 1 T G scaffold10228 ScafM SNP 0036.scaffold00137 727758 1 A G scaffold10228 Both INDEL 0036.scaffold00137 727840 1 . A scaffold10228 Both SNP 0036.scaffold00137 727965 2 TT CC scaffold10228 Both SNP 0036.scaffold00137 728429 1 A G scaffold10228 Both SNP 0036.scaffold00137 728820 1 C G scaffold10228 Both SNP 0036.scaffold00137 729258 1 T A scaffold10228 Both INDEL 0036.scaffold00137 729370 2 .. CA scaffold10228 Both INDEL 0036.scaffold00137 729416 1 C . scaffold10228 Both SNP 0036.scaffold00137 730196 1 C G scaffold10228 ScafM SNP 0036.scaffold00137 734605 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 736280 1 T C scaffold10228 Both INDEL 0036.scaffold00137 736371 1 T . scaffold10228 ScafM SNP 0036.scaffold00137 736692 1 G T scaffold10228 Both INDEL 0036.scaffold00137 736702 1 . T scaffold10228 ScafM SNP 0036.scaffold00137 737180 1 C T scaffold10228 ScafM SNP 0036.scaffold00137 739041 1 C A scaffold10228 Both INDEL 0036.scaffold00137 739192 1 T . scaffold10228 Both SNP 0036.scaffold00137 739770 1 T G scaffold10228 Both INDEL 0036.scaffold00137 739970 2 AA .. scaffold10228 ScafM INDEL 0036.scaffold00137 740799 1 . T scaffold10228 ReadM SNP 0036.scaffold00137 741024 1 T C - ScafM SNP 0036.scaffold00137 742230 1 A C scaffold10228 ScafM INDEL 0036.scaffold00137 742309 1 A . scaffold10228 ScafM INDEL 0036.scaffold00137 742347 1 . A scaffold10228 Both SNP 0036.scaffold00137 742623 1 A C scaffold10228 ScafM INDEL 0036.scaffold00137 743267 1 T . scaffold10228 ScafM INDEL 0036.scaffold00137 746277 1 A . scaffold7008 ScafM SNP 0036.scaffold00137 746336 1 A G scaffold7008 Both SNP 0036.scaffold00137 746765 1 A G scaffold7008 ScafM SNP 0036.scaffold00137 747523 1 T C scaffold7008 ScafM SNP 0036.scaffold00137 751687 1 T G scaffold13740 ScafM SNP 0036.scaffold00137 752452 2 AG GT scaffold13740 Both SNP 0036.scaffold00137 752725 1 A G scaffold13740 Both INDEL 0036.scaffold00137 752774 1 T . scaffold13740 Both INDEL 0036.scaffold00137 754177 1 . A scaffold13740 ScafM SNP 0036.scaffold00137 754445 1 T C scaffold13740 ScafM INDEL 0036.scaffold00137 754448 3 ... AAA scaffold13740 ScafM SNP 0036.scaffold00137 754510 1 C T scaffold13740 Both SNP 0036.scaffold00137 754528 1 C T scaffold13740 Both SNP 0036.scaffold00137 758365 1 G A scaffold13740 Both SNP 0036.scaffold00137 758514 1 C T scaffold13740 Both SNP 0036.scaffold00137 759039 1 C T scaffold13740 Both SNP 0036.scaffold00137 759150 1 G A scaffold13740 Both SNP 0036.scaffold00137 759278 1 C G scaffold13740 Both SNP 0036.scaffold00137 759752 1 T C scaffold13740 Both SNP 0036.scaffold00137 759777 1 C T scaffold13740 Both SNP 0036.scaffold00137 760027 1 A C scaffold13740 Both SNP 0036.scaffold00137 760149 1 A G scaffold13740 Both SNP 0036.scaffold00137 760392 1 C T scaffold13740 Both SNP 0036.scaffold00137 760482 1 A G scaffold13740 ScafM SNP 0036.scaffold00137 760560 1 T C scaffold13740 ScafM SNP 0036.scaffold00137 760721 1 A T scaffold13740 ScafM SNP 0036.scaffold00137 760735 1 C A scaffold13740 ScafM SNP 0036.scaffold00137 760782 1 G A scaffold13740 ScafM SNP 0036.scaffold00137 760865 1 A T scaffold13740 ScafM SNP 0036.scaffold00137 760895 1 T C scaffold13740 ScafM SNP 0036.scaffold00137 760913 1 A G scaffold13740 ScafM SNP 0036.scaffold00137 760916 1 A C scaffold13740 ScafM SNP 0036.scaffold00137 760920 1 G T scaffold13740 ScafM SNP 0036.scaffold00137 760929 1 C T scaffold13740 ScafM INDEL 0036.scaffold00137 760933 18 AAAAAAAATATAGGTATT ..............CCCC scaffold13740 ScafM SNP 0036.scaffold00137 760952 1 T C scaffold13740 ScafM INDEL 0036.scaffold00137 760969 1 . A scaffold13740 Both SNP 0036.scaffold00137 761246 1 G T scaffold13740 Both SNP 0036.scaffold00137 761342 1 A T scaffold13740 ScafM INDEL 0036.scaffold00137 761391 8 CCTTTTTC ........ scaffold13740 Both SNP 0036.scaffold00137 761417 1 T A scaffold13740 Both SNP 0036.scaffold00137 761565 1 C A scaffold13740 Both SNP 0036.scaffold00137 761744 1 G T scaffold13740 Both SNP 0036.scaffold00137 761812 1 T C scaffold13740 ScafM SNP 0036.scaffold00137 762170 1 G T scaffold13740 ScafM SNP 0036.scaffold00137 762174 1 C T scaffold13740 Both SNP 0036.scaffold00137 762212 1 A G scaffold13740 Both SNP 0036.scaffold00137 762262 1 A T scaffold13740 ScafM INDEL 0036.scaffold00137 762381 1 A . scaffold13740 ScafM SNP 0036.scaffold00137 762437 1 G C scaffold13740 ScafM SNP 0036.scaffold00137 766363 1 T G scaffold8361 ScafM SNP 0036.scaffold00137 766507 1 A T scaffold8361 ScafM SNP 0036.scaffold00137 766647 1 T C scaffold8361 ScafM INDEL 0037.scaffold00140 14775 1 . A scaffold13992 ScafM INDEL 0037.scaffold00140 15085 3 ... TTT scaffold13992 ScafM SNP 0037.scaffold00140 70972 2 CG TA scaffold3741 ScafM SNP 0037.scaffold00140 70978 1 A C scaffold3741 ScafM SNP 0037.scaffold00140 71036 1 A G scaffold3741 ScafM SNP 0037.scaffold00140 71041 1 G A scaffold3741 ScafM SNP 0037.scaffold00140 71046 1 A C scaffold3741 ScafM SNP 0037.scaffold00140 71118 1 T C scaffold3741 ScafM SNP 0037.scaffold00140 71136 1 A G scaffold3741 ScafM SNP 0037.scaffold00140 71142 1 G A scaffold3741 ScafM SNP 0037.scaffold00140 71165 1 G A scaffold3741 ScafM SNP 0037.scaffold00140 71170 1 A C scaffold3741 ScafM SNP 0037.scaffold00140 71176 2 CT TG scaffold3741 ScafM SNP 0037.scaffold00140 71186 1 T C scaffold3741 ScafM SNP 0037.scaffold00140 71202 1 T C scaffold3741 ScafM SNP 0037.scaffold00140 71240 1 G A scaffold3741 ScafM SNP 0037.scaffold00140 71272 1 A G scaffold3741 ScafM SNP 0037.scaffold00140 71291 1 T C scaffold3741 ScafM SNP 0037.scaffold00140 71301 1 G A scaffold3741 ScafM INDEL 0037.scaffold00140 71305 1 . C scaffold3741 ScafM SNP 0037.scaffold00140 71361 1 G A scaffold3741 ScafM SNP 0037.scaffold00140 71371 1 A G scaffold3741 ScafM SNP 0037.scaffold00140 71375 1 A T scaffold3741 ScafM SNP 0037.scaffold00140 71381 1 T G scaffold3741 ScafM SNP 0037.scaffold00140 89644 1 A C scaffold2121 ScafM SNP 0037.scaffold00140 143436 1 A C scaffold2121 ScafM INDEL 0037.scaffold00140 143439 6 GGCTGC ...... scaffold2121 ScafM INDEL 0037.scaffold00140 148707 1 . T scaffold2121 ScafM SNP 0037.scaffold00140 167351 1 T C scaffold4180 ScafM INDEL 0037.scaffold00140 167359 1 G . scaffold4180 ScafM SNP 0037.scaffold00140 167394 1 A T scaffold4180 ScafM SNP 0037.scaffold00140 167402 1 T C scaffold4180 ScafM SNP 0037.scaffold00140 167410 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 167413 1 C G scaffold4180 ScafM SNP 0037.scaffold00140 167425 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 167436 1 G T scaffold4180 ScafM SNP 0037.scaffold00140 167444 1 T A scaffold4180 ScafM INDEL 0037.scaffold00140 167445 1 . T scaffold4180 ScafM SNP 0037.scaffold00140 167557 1 T C scaffold4180 ScafM SNP 0037.scaffold00140 167567 1 C T scaffold4180 ScafM INDEL 0037.scaffold00140 167588 2 .. AT scaffold4180 ScafM SNP 0037.scaffold00140 167593 1 G A scaffold4180 ScafM SNP 0037.scaffold00140 167595 1 G T scaffold4180 ScafM SNP 0037.scaffold00140 167604 1 G T scaffold4180 ScafM SNP 0037.scaffold00140 167670 1 T C scaffold2607 ScafM SNP 0037.scaffold00140 167703 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 167722 1 C A scaffold2607 ScafM SNP 0037.scaffold00140 167740 1 C A scaffold2607 ScafM SNP 0037.scaffold00140 167772 1 C G scaffold2607 ScafM SNP 0037.scaffold00140 167787 1 G C scaffold2607 ScafM SNP 0037.scaffold00140 167806 2 AC GT scaffold2607 ScafM SNP 0037.scaffold00140 167858 1 C A scaffold2607 ScafM SNP 0037.scaffold00140 167865 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 167875 1 C A scaffold2607 ScafM SNP 0037.scaffold00140 167916 1 G A scaffold2607 ScafM INDEL 0037.scaffold00140 167921 1 . A scaffold2607 ScafM SNP 0037.scaffold00140 167933 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 167950 1 A T scaffold2607 ScafM SNP 0037.scaffold00140 167964 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168034 1 A G scaffold2607 ScafM SNP 0037.scaffold00140 168335 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168351 1 A G scaffold2607 ScafM SNP 0037.scaffold00140 168371 2 GG CA scaffold2607 ScafM SNP 0037.scaffold00140 168381 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168394 1 G A scaffold2607 ScafM SNP 0037.scaffold00140 168416 1 A G scaffold2607 ScafM SNP 0037.scaffold00140 168444 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168448 1 T C scaffold2607 ScafM INDEL 0037.scaffold00140 168498 1 G . scaffold2607 ScafM SNP 0037.scaffold00140 168577 2 CC TT scaffold2607 ScafM SNP 0037.scaffold00140 168605 1 A T scaffold2607 ScafM SNP 0037.scaffold00140 168607 1 A C scaffold2607 ScafM SNP 0037.scaffold00140 168618 1 G T scaffold2607 ScafM SNP 0037.scaffold00140 168621 1 A G scaffold2607 ScafM SNP 0037.scaffold00140 168662 1 T C scaffold2607 ScafM INDEL 0037.scaffold00140 168675 1 . A scaffold2607 ScafM SNP 0037.scaffold00140 168686 1 G C scaffold2607 ScafM SNP 0037.scaffold00140 168691 1 T C scaffold2607 ScafM SNP 0037.scaffold00140 168703 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168721 1 G A scaffold2607 ScafM SNP 0037.scaffold00140 168753 1 T C scaffold2607 ScafM SNP 0037.scaffold00140 168807 1 T C scaffold2607 ScafM SNP 0037.scaffold00140 168824 1 C T scaffold2607 ScafM SNP 0037.scaffold00140 168834 1 A G scaffold2607 ScafM SNP 0037.scaffold00140 168984 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 169030 1 T A scaffold4180 ScafM SNP 0037.scaffold00140 169047 1 T C scaffold4180 ScafM INDEL 0037.scaffold00140 169062 5 ..... TTTGG scaffold4180 ScafM SNP 0037.scaffold00140 169067 1 G A scaffold4180 ScafM SNP 0037.scaffold00140 169141 1 T A scaffold4180 ScafM SNP 0037.scaffold00140 169163 1 C A scaffold4180 ScafM SNP 0037.scaffold00140 169175 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 169211 1 G A scaffold4180 ScafM SNP 0037.scaffold00140 169217 1 T G scaffold4180 ScafM SNP 0037.scaffold00140 169223 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 169227 1 C G scaffold4180 ScafM SNP 0037.scaffold00140 169237 1 T C scaffold4180 ScafM SNP 0037.scaffold00140 169252 1 A G scaffold4180 ScafM SNP 0037.scaffold00140 169317 1 C A scaffold4180 ScafM SNP 0037.scaffold00140 169346 1 A T scaffold4180 ScafM SNP 0037.scaffold00140 170381 2 CT TC scaffold34868 ScafM SNP 0037.scaffold00140 170396 1 C T scaffold34868 ScafM SNP 0037.scaffold00140 198377 1 A C scaffold24982 ScafM INDEL 0037.scaffold00140 198438 1 . A scaffold24982 ScafM SNP 0037.scaffold00140 198440 1 T A scaffold24982 ScafM INDEL 0037.scaffold00140 198617 5 ..... AGCTA scaffold24982 ScafM INDEL 0037.scaffold00140 225472 7 ....... CCCCCCC scaffold6183 ScafM SNP 0037.scaffold00140 305398 1 C T scaffold2042 ScafM SNP 0037.scaffold00140 305415 1 G A scaffold2042 ScafM SNP 0037.scaffold00140 305457 1 T C scaffold2042 ScafM INDEL 0037.scaffold00140 339398 1 T . scaffold13406 ScafM INDEL 0037.scaffold00140 339427 1 . A scaffold13406 ScafM SNP 0037.scaffold00140 342128 1 A G scaffold1838 ScafM SNP 0037.scaffold00140 342153 1 G T scaffold1838 ScafM SNP 0037.scaffold00140 342206 1 C A scaffold1838 ScafM SNP 0037.scaffold00140 342217 1 T G scaffold1838 ScafM SNP 0037.scaffold00140 342224 1 G A scaffold1838 ScafM SNP 0037.scaffold00140 342236 1 T C scaffold1838 ScafM SNP 0037.scaffold00140 342245 1 T C scaffold1838 ScafM SNP 0037.scaffold00140 345233 1 A T scaffold13406 ScafM SNP 0037.scaffold00140 345245 1 G A scaffold13406 ScafM INDEL 0037.scaffold00140 345247 1 . T scaffold13406 ScafM INDEL 0037.scaffold00140 348960 13 ............. GCCCCCGCCAGTA scaffold13406 ScafM SNP 0037.scaffold00140 357199 1 G A scaffold19244 ScafM SNP 0037.scaffold00140 357210 1 A G scaffold19244 ScafM SNP 0037.scaffold00140 357216 2 AC CT scaffold19244 ScafM SNP 0037.scaffold00140 357232 1 C A scaffold19244 ScafM SNP 0037.scaffold00140 357235 1 T C scaffold19244 ScafM INDEL 0037.scaffold00140 357249 3 AAA .CT scaffold19244 ScafM SNP 0037.scaffold00140 357275 1 A C scaffold19244 ScafM SNP 0037.scaffold00140 357278 1 G A scaffold19244 ScafM SNP 0037.scaffold00140 357281 1 A C scaffold19244 ScafM SNP 0037.scaffold00140 357285 1 G A scaffold19244 ScafM INDEL 0037.scaffold00140 385634 23 ....................... GTGTTGGGACAAATCAAGAGGAA scaffold5585 ScafM SNP 0037.scaffold00140 385656 1 A G scaffold5585 ScafM SNP 0037.scaffold00140 385678 1 A G scaffold5585 ScafM SNP 0037.scaffold00140 385752 1 T C scaffold5585 ScafM SNP 0037.scaffold00140 385754 1 A G scaffold5585 ScafM SNP 0037.scaffold00140 385768 1 C A scaffold5585 ScafM SNP 0037.scaffold00140 385775 1 C A scaffold5585 ScafM SNP 0037.scaffold00140 385851 1 G A scaffold5585 ScafM SNP 0037.scaffold00140 385863 1 C T scaffold5585 ScafM SNP 0037.scaffold00140 385875 1 C A scaffold5585 ScafM SNP 0037.scaffold00140 385896 1 C T scaffold5585 ScafM SNP 0037.scaffold00140 385937 1 G A scaffold5585 ScafM SNP 0037.scaffold00140 385940 1 G A scaffold5585 ScafM SNP 0037.scaffold00140 385945 1 C A scaffold5585 ScafM SNP 0037.scaffold00140 385950 1 T C scaffold5585 ScafM SNP 0037.scaffold00140 385953 1 C T scaffold5585 ScafM SNP 0037.scaffold00140 385956 1 G A scaffold5585 ScafM SNP 0037.scaffold00140 385977 1 C T scaffold5585 ScafM SNP 0037.scaffold00140 386065 1 G A scaffold13850 ScafM SNP 0037.scaffold00140 386071 1 T C scaffold13850 ScafM SNP 0037.scaffold00140 386218 1 A G scaffold2643 ScafM INDEL 0037.scaffold00140 407782 12 ............ GGGGGGGGGGGG scaffold431 ScafM INDEL 0037.scaffold00140 420028 3 ... GGC scaffold431 ScafM INDEL 0037.scaffold00140 420029 12 ............ GGGGGGGGGGGG scaffold431 ScafM INDEL 0037.scaffold00140 427140 3 ... GGG scaffold431 ScafM SNP 0037.scaffold00140 427144 2 AT GG scaffold431 ScafM SNP 0037.scaffold00140 427150 1 A G scaffold431 ScafM INDEL 0037.scaffold00140 445481 15 ............... CCCCCCCCCCCCCCC scaffold431 ReadM SNP 0037.scaffold00140 502634 1 A G - ScafM INDEL 0037.scaffold00140 504614 1 . T scaffold5147 ScafM INDEL 0037.scaffold00140 504616 7 ......T AAAAAAA scaffold5147 ScafM INDEL 0037.scaffold00140 504641 7 ....... AAAGAAG scaffold5147 ScafM SNP 0037.scaffold00140 504643 1 T A scaffold5147 ScafM INDEL 0037.scaffold00140 504644 2 .. AA scaffold5147 ScafM INDEL 0037.scaffold00140 504645 1 . A scaffold5147 ScafM INDEL 0037.scaffold00140 504646 2 .. AA scaffold5147 ScafM INDEL 0037.scaffold00140 504648 2 .. AG scaffold5147 ScafM INDEL 0037.scaffold00140 504652 3 ..C GAA scaffold5147 ScafM SNP 0037.scaffold00140 504655 1 T A scaffold5147 ScafM INDEL 0037.scaffold00140 504656 3 ..C AAA scaffold5147 ScafM INDEL 0037.scaffold00140 504660 2 .. GA scaffold5147 ScafM INDEL 0037.scaffold00140 504661 2 .. GA scaffold5147 ScafM INDEL 0037.scaffold00140 504662 4 ...C AGAA scaffold5147 ScafM SNP 0037.scaffold00140 504665 1 T A scaffold5147 ScafM INDEL 0037.scaffold00140 504667 3 ..G AAA scaffold5147 ScafM SNP 0037.scaffold00140 506822 1 A G scaffold2672 ScafM SNP 0037.scaffold00140 507152 1 C T scaffold2672 ScafM SNP 0037.scaffold00140 507166 1 A C scaffold2672 ScafM INDEL 0037.scaffold00140 511185 2 TT .. scaffold5147 ScafM SNP 0037.scaffold00140 547550 1 T C scaffold16115 ScafM SNP 0037.scaffold00140 547578 1 G A scaffold16115 ScafM SNP 0037.scaffold00140 547624 2 AA TT scaffold16115 ScafM SNP 0037.scaffold00140 547633 2 CG AT scaffold16115 ScafM SNP 0037.scaffold00140 547639 1 A G scaffold16115 ScafM SNP 0037.scaffold00140 547641 1 T G scaffold16115 ScafM SNP 0037.scaffold00140 547644 1 T C scaffold16115 ScafM SNP 0037.scaffold00140 547647 1 T C scaffold16115 ScafM INDEL 0037.scaffold00140 549067 3 ... TTT scaffold5147 ScafM INDEL 0037.scaffold00140 552556 1 T . scaffold5147 ScafM SNP 0037.scaffold00140 557103 1 G C scaffold3408 ScafM SNP 0037.scaffold00140 565264 1 C T scaffold1001 ScafM SNP 0037.scaffold00140 572231 1 G A scaffold1901 ScafM SNP 0037.scaffold00140 572341 1 T C scaffold3591 ScafM SNP 0037.scaffold00140 572454 1 T A scaffold3591 ScafM SNP 0037.scaffold00140 572461 1 G A scaffold3591 ScafM SNP 0037.scaffold00140 572505 1 G A scaffold3591 ScafM SNP 0037.scaffold00140 572537 1 T C scaffold3591 ScafM SNP 0037.scaffold00140 572541 2 AG GC scaffold3591 ScafM SNP 0037.scaffold00140 572547 1 T C scaffold3591 ScafM SNP 0037.scaffold00140 572563 1 A C scaffold3591 ScafM SNP 0037.scaffold00140 572607 1 C G scaffold3591 ScafM SNP 0037.scaffold00140 572610 1 G C scaffold3591 ScafM SNP 0037.scaffold00140 572613 1 T G scaffold3591 ScafM SNP 0037.scaffold00140 572639 1 G T scaffold3591 ScafM SNP 0037.scaffold00140 572650 1 C T scaffold3591 ScafM SNP 0037.scaffold00140 572675 1 A T scaffold3591 ScafM INDEL 0037.scaffold00140 572686 3 ... AAT scaffold3591 ScafM SNP 0037.scaffold00140 572754 1 A G scaffold3591 ScafM SNP 0037.scaffold00140 572776 1 C T scaffold3591 ScafM SNP 0037.scaffold00140 572784 1 G A scaffold3591 ScafM SNP 0037.scaffold00140 572786 1 G A scaffold3591 ScafM SNP 0037.scaffold00140 572807 1 A T scaffold3591 ScafM INDEL 0037.scaffold00140 572834 1 . A scaffold3591 ScafM SNP 0037.scaffold00140 572951 1 C T scaffold3591 ScafM SNP 0037.scaffold00140 572961 1 C T scaffold3591 ScafM SNP 0037.scaffold00140 572975 1 C A scaffold3591 ScafM SNP 0037.scaffold00140 572981 1 T A scaffold3591 ScafM SNP 0037.scaffold00140 572985 1 G A scaffold3591 ScafM INDEL 0037.scaffold00140 573052 6 CCCCCC ...... scaffold3591 ScafM SNP 0037.scaffold00140 573100 1 T A scaffold3591 ScafM SNP 0037.scaffold00140 573136 1 A G scaffold3591 ScafM INDEL 0037.scaffold00140 573261 2 .. TT scaffold3591 ScafM SNP 0037.scaffold00140 573271 1 T A scaffold3591 ScafM SNP 0037.scaffold00140 573276 1 A G scaffold3591 ScafM INDEL 0037.scaffold00140 573298 2 TA .. scaffold3591 ScafM SNP 0037.scaffold00140 573321 1 G T scaffold3591 ScafM SNP 0037.scaffold00140 573331 1 A G scaffold3591 ScafM INDEL 0037.scaffold00140 573334 6 TGTTAT ...... scaffold3591 ScafM SNP 0037.scaffold00140 573365 1 G C scaffold3591 ScafM INDEL 0037.scaffold00140 573449 3 ... TCA scaffold3591 ScafM SNP 0037.scaffold00140 573532 1 G A scaffold3591 ScafM SNP 0037.scaffold00140 596175 1 G C scaffold31562 ScafM SNP 0037.scaffold00140 596267 1 C T scaffold31562 ScafM INDEL 0037.scaffold00140 596296 3 ... CAA scaffold31562 ScafM INDEL 0037.scaffold00140 596366 1 . A scaffold31562 ScafM SNP 0037.scaffold00140 599258 1 G T scaffold31562 ScafM INDEL 0037.scaffold00140 599326 8 ........ AACTCCCA scaffold31562 ScafM SNP 0037.scaffold00140 599390 1 T C scaffold31562 ScafM SNP 0037.scaffold00140 599574 1 T C scaffold31562 ScafM INDEL 0037.scaffold00140 599806 2 AT .. scaffold31562 ScafM SNP 0037.scaffold00140 599864 1 A G scaffold31562 ScafM SNP 0037.scaffold00140 599925 1 G T scaffold31562 ScafM SNP 0037.scaffold00140 599972 1 T C scaffold31562 ScafM SNP 0037.scaffold00140 600139 1 A T scaffold31562 ScafM INDEL 0037.scaffold00140 600163 25 GACAAATTAATAGCAATAAATCAAA ......................... scaffold31562 ScafM SNP 0037.scaffold00140 600373 1 C T scaffold31562 ScafM SNP 0037.scaffold00140 600375 1 C A scaffold31562 ScafM INDEL 0037.scaffold00140 610132 9 ......... CACTTATAA scaffold1279 ScafM SNP 0037.scaffold00140 623052 1 C G scaffold1279 ScafM SNP 0037.scaffold00140 623123 1 T G scaffold1279 ScafM INDEL 0037.scaffold00140 623136 4 TAAT .... scaffold1279 ScafM INDEL 0037.scaffold00140 623145 9 ATCATCAGT ......... scaffold1279 ScafM SNP 0037.scaffold00140 623162 1 A C scaffold1279 ScafM INDEL 0037.scaffold00140 623208 11 ........... ATAAAATTTGG scaffold1279 ScafM INDEL 0037.scaffold00140 623211 14 .............. CTCTAAGCCTGGCT scaffold1279 ScafM INDEL 0037.scaffold00140 632741 4 TAAC .... scaffold1279 ScafM INDEL 0037.scaffold00140 632772 3 AAT ... scaffold1279 ScafM INDEL 0037.scaffold00140 632777 21 CATAAAAACTTATCCTACATT ..................... scaffold1279 ScafM SNP 0037.scaffold00140 632800 2 TA GG scaffold1279 ScafM INDEL 0037.scaffold00140 632803 1 A . scaffold1279 ScafM SNP 0037.scaffold00140 632805 1 A G scaffold1279 ScafM INDEL 0037.scaffold00140 632807 4 ACAA .... scaffold1279 ScafM SNP 0037.scaffold00140 641528 1 T C scaffold1279 ScafM SNP 0037.scaffold00140 641576 1 T A scaffold1279 ScafM SNP 0037.scaffold00140 642154 1 T A scaffold1279 ScafM SNP 0037.scaffold00140 642236 1 A G scaffold1279 ScafM SNP 0037.scaffold00140 642267 1 T C scaffold1279 ScafM SNP 0037.scaffold00140 642384 1 G C scaffold1279 ScafM SNP 0037.scaffold00140 642402 1 A G scaffold1279 ScafM SNP 0037.scaffold00140 642431 1 A G scaffold1279 ScafM SNP 0037.scaffold00140 642509 1 G A scaffold1279 ScafM SNP 0037.scaffold00140 642523 1 C T scaffold1279 ScafM SNP 0037.scaffold00140 642678 1 C T scaffold1279 ScafM SNP 0037.scaffold00140 642684 1 A C scaffold1279 ScafM SNP 0037.scaffold00140 642907 1 A T scaffold1279 ScafM SNP 0037.scaffold00140 642918 1 G T scaffold1279 ScafM SNP 0037.scaffold00140 642938 1 C A scaffold1279 ScafM INDEL 0037.scaffold00140 658468 2 GG .. scaffold1279 ScafM INDEL 0037.scaffold00140 663543 1 T . scaffold1279 ScafM SNP 0037.scaffold00140 664123 1 A G scaffold1279 ScafM SNP 0037.scaffold00140 667373 1 A C scaffold1279 ScafM SNP 0037.scaffold00140 667425 1 G A scaffold1279 ScafM INDEL 0037.scaffold00140 683474 1 . A scaffold9395 ScafM SNP 0037.scaffold00140 694746 1 C T scaffold5367 ScafM SNP 0037.scaffold00140 696188 1 T C scaffold1927 ScafM SNP 0037.scaffold00140 696226 1 C A scaffold1927 ScafM SNP 0037.scaffold00140 696258 1 A G scaffold1927 ScafM INDEL 0037.scaffold00140 696273 1 . A scaffold1927 ScafM SNP 0037.scaffold00140 696278 1 G A scaffold1927 ScafM SNP 0037.scaffold00140 696398 1 G A scaffold1927 ScafM SNP 0037.scaffold00140 696405 1 A T scaffold1927 ScafM INDEL 0037.scaffold00140 696457 1 . T scaffold1927 ScafM INDEL 0037.scaffold00140 696468 1 . A scaffold1927 ScafM SNP 0037.scaffold00140 696504 1 A T scaffold1927 ScafM SNP 0037.scaffold00140 696511 1 A G scaffold1927 ScafM SNP 0037.scaffold00140 696528 1 A T scaffold1927 ReadM INDEL 0037.scaffold00140 709745 1 . A - ScafM SNP 0037.scaffold00140 720302 1 C A scaffold5949 ScafM SNP 0037.scaffold00140 724845 2 GT TC scaffold5949 ScafM SNP 0037.scaffold00140 724849 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 724868 1 A G scaffold5949 ScafM INDEL 0037.scaffold00140 724891 2 TA .. scaffold5949 ScafM SNP 0037.scaffold00140 724913 2 TC GT scaffold5949 ScafM SNP 0037.scaffold00140 724916 1 C A scaffold5949 ScafM INDEL 0037.scaffold00140 724919 1 T . scaffold5949 ScafM SNP 0037.scaffold00140 724921 2 AA CC scaffold5949 ScafM SNP 0037.scaffold00140 724924 3 ACT GTG scaffold5949 ScafM SNP 0037.scaffold00140 724955 1 A G scaffold5949 ScafM SNP 0037.scaffold00140 724970 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 724987 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 725045 1 T A scaffold5949 ScafM SNP 0037.scaffold00140 725051 2 TG AA scaffold5949 ScafM SNP 0037.scaffold00140 725075 1 A T scaffold5949 ScafM SNP 0037.scaffold00140 725087 1 C T scaffold5949 ScafM SNP 0037.scaffold00140 725093 1 T C scaffold5949 ScafM SNP 0037.scaffold00140 725095 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 725113 1 T G scaffold5949 ScafM SNP 0037.scaffold00140 725117 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 728740 1 T G scaffold5949 ScafM INDEL 0037.scaffold00140 735985 1 T . scaffold5949 ScafM SNP 0037.scaffold00140 737474 1 G A scaffold5949 ScafM SNP 0037.scaffold00140 737476 1 C A scaffold5949 ScafM SNP 0037.scaffold00140 737490 1 G T scaffold5949 ScafM INDEL 0037.scaffold00140 737492 1 T . scaffold5949 ScafM SNP 0037.scaffold00140 737525 1 G T scaffold5949 ScafM INDEL 0037.scaffold00140 737913 1 . T scaffold17606 ScafM SNP 0037.scaffold00140 737919 1 G A scaffold17606 ScafM SNP 0037.scaffold00140 737925 1 C A scaffold17606 ScafM SNP 0037.scaffold00140 737929 1 T G scaffold17606 ScafM SNP 0037.scaffold00140 737933 1 C A scaffold17606 ScafM SNP 0037.scaffold00140 737941 1 A T scaffold17606 ScafM SNP 0037.scaffold00140 737961 1 G A scaffold17606 ScafM SNP 0037.scaffold00140 737968 1 G C scaffold17606 ScafM SNP 0037.scaffold00140 737995 1 C A scaffold17606 ScafM INDEL 0037.scaffold00140 738004 7 TTTGTTT ....... scaffold17606 ScafM SNP 0037.scaffold00140 738025 1 G T scaffold17606 ScafM SNP 0037.scaffold00140 738039 1 C T scaffold17606 ScafM SNP 0037.scaffold00140 738068 1 T A scaffold17606 ScafM SNP 0037.scaffold00140 738082 1 G A scaffold17606 ScafM SNP 0037.scaffold00140 738097 1 A C scaffold17606 ScafM SNP 0037.scaffold00140 738133 1 C T scaffold17606 ScafM SNP 0037.scaffold00140 738176 1 C T scaffold17606 ScafM SNP 0037.scaffold00140 738196 1 A C scaffold17606 ScafM SNP 0037.scaffold00140 738214 1 C A scaffold17606 ScafM SNP 0037.scaffold00140 738216 1 G T scaffold17606 ScafM SNP 0037.scaffold00140 738224 1 T C scaffold17606 ScafM SNP 0037.scaffold00140 738296 2 TT AG scaffold17606 ScafM SNP 0037.scaffold00140 738312 1 C T scaffold17606 ScafM SNP 0037.scaffold00140 738344 1 T A scaffold17606 ScafM SNP 0037.scaffold00140 738346 1 C A scaffold17606 ScafM SNP 0037.scaffold00140 738359 1 C G scaffold17606 ScafM SNP 0037.scaffold00140 738367 2 AC GA scaffold17606 ScafM SNP 0037.scaffold00140 738372 1 C G scaffold17606 ScafM SNP 0037.scaffold00140 738381 1 T A scaffold17606 ScafM SNP 0037.scaffold00140 738452 1 T A scaffold17606 ScafM SNP 0037.scaffold00140 738526 1 G A scaffold17606 ScafM SNP 0037.scaffold00140 738536 1 A C scaffold17606 ScafM SNP 0037.scaffold00140 738577 1 A C scaffold17606 ScafM SNP 0037.scaffold00140 738600 1 G C scaffold17606 ScafM SNP 0037.scaffold00140 738603 1 G C scaffold17606 ScafM SNP 0037.scaffold00140 738608 2 CA AG scaffold17606 ScafM SNP 0037.scaffold00140 738624 1 G T scaffold17606 ScafM INDEL 0037.scaffold00140 738626 1 T . scaffold17606 ScafM SNP 0037.scaffold00140 738637 1 T A scaffold17606 ScafM SNP 0037.scaffold00140 738641 1 C A scaffold17606 ScafM SNP 0037.scaffold00140 738647 1 T C scaffold17606 ScafM SNP 0037.scaffold00140 738662 1 A G scaffold17606 ScafM SNP 0037.scaffold00140 738677 1 T C scaffold17606 ScafM SNP 0037.scaffold00140 738690 1 G A scaffold17606 ScafM INDEL 0037.scaffold00140 738692 1 . T scaffold17606 ScafM INDEL 0037.scaffold00140 738703 1 C . scaffold17606 ScafM INDEL 0037.scaffold00140 738719 2 .T GG scaffold17606 Both INDEL 0037.scaffold00140 772140 1 . T scaffold10180 Both INDEL 0037.scaffold00140 776296 1 A . scaffold10180 ScafM SNP 0037.scaffold00140 780422 1 T C scaffold2683 ScafM SNP 0037.scaffold00140 780460 1 G A scaffold2683 ScafM SNP 0037.scaffold00140 780477 2 CA TT scaffold2683 ScafM SNP 0037.scaffold00140 780482 1 T A scaffold2683 ScafM SNP 0037.scaffold00140 780491 1 T C scaffold2683 ScafM SNP 0037.scaffold00140 780496 1 T C scaffold2683 ScafM SNP 0037.scaffold00140 780503 2 CT AG scaffold2683 ScafM SNP 0037.scaffold00140 780507 1 A G scaffold2683 ScafM SNP 0037.scaffold00140 780524 1 C T scaffold2683 ScafM INDEL 0037.scaffold00140 780535 3 CTA ... scaffold2683 ScafM SNP 0037.scaffold00140 780540 1 C A scaffold2683 ScafM INDEL 0037.scaffold00140 780543 1 C . scaffold2683 ScafM INDEL 0037.scaffold00140 780546 2 TT .. scaffold2683 ScafM SNP 0037.scaffold00140 780567 1 T C scaffold2683 ScafM INDEL 0037.scaffold00140 826516 1 . A scaffold31167 ScafM SNP 0037.scaffold00140 828294 1 C G scaffold31167 ScafM SNP 0037.scaffold00140 828296 1 G A scaffold31167 ScafM SNP 0037.scaffold00140 828352 1 A T scaffold31167 ScafM SNP 0037.scaffold00140 828374 1 A T scaffold31167 ScafM SNP 0037.scaffold00140 828390 1 C T scaffold31167 ScafM SNP 0037.scaffold00140 839906 1 A T scaffold5336 ScafM SNP 0037.scaffold00140 839919 1 G T scaffold5336 ScafM SNP 0037.scaffold00140 839931 1 T A scaffold5336 ScafM SNP 0037.scaffold00140 840040 1 C A scaffold5336 ScafM SNP 0037.scaffold00140 840046 2 AA GG scaffold5336 ScafM INDEL 0037.scaffold00140 840054 1 T . scaffold5336 ScafM SNP 0037.scaffold00140 840120 1 G A scaffold5336 ScafM SNP 0037.scaffold00140 840129 1 C G scaffold5336 ScafM SNP 0037.scaffold00140 840145 1 G A scaffold5336 ScafM SNP 0037.scaffold00140 840167 1 C T scaffold5336 ScafM SNP 0037.scaffold00140 840210 2 TA CC scaffold5336 ScafM SNP 0037.scaffold00140 840239 1 T G scaffold5336 ReadM SNP 0037.scaffold00140 843403 1 C A - ScafM SNP 0037.scaffold00140 846566 1 G C scaffold13206 ScafM INDEL 0037.scaffold00140 846782 1 . A scaffold13206 ScafM INDEL 0037.scaffold00140 846785 1 . A scaffold13206 ScafM SNP 0037.scaffold00140 848460 1 C T scaffold4795 ScafM SNP 0037.scaffold00140 848479 1 T G scaffold4795 ScafM SNP 0037.scaffold00140 848518 1 A G scaffold4795 ScafM INDEL 0037.scaffold00140 848544 2 .. TA scaffold4795 ScafM SNP 0037.scaffold00140 854005 1 C T scaffold6371 ScafM SNP 0037.scaffold00140 854100 1 A G scaffold6371 ScafM SNP 0037.scaffold00140 854186 1 G T scaffold6371 ScafM SNP 0037.scaffold00140 854212 1 C T scaffold6371 ScafM SNP 0037.scaffold00140 854417 1 A G scaffold6371 ScafM SNP 0037.scaffold00140 854449 1 G C scaffold6371 ScafM SNP 0037.scaffold00140 854454 1 G A scaffold6371 ScafM SNP 0037.scaffold00140 854519 1 T C scaffold6371 ScafM SNP 0037.scaffold00140 854615 1 A C scaffold6371 Both SNP 0037.scaffold00140 854758 1 G A scaffold6371 ScafM SNP 0037.scaffold00140 856968 1 A C scaffold7979 ScafM SNP 0037.scaffold00140 857062 1 C T scaffold7979 ReadM INDEL 0037.scaffold00140 868295 1 . T - ScafM INDEL 0037.scaffold00140 876494 30 .............................. CGCATATATATATATATAATTGCTTTATAT scaffold7979 ScafM INDEL 0037.scaffold00140 882865 1 . A scaffold7979 ScafM INDEL 0037.scaffold00140 893065 1 T . scaffold7979 ScafM INDEL 0037.scaffold00140 926279 1 C . scaffold15435 ScafM SNP 0037.scaffold00140 926551 1 C A scaffold15435 ScafM SNP 0037.scaffold00140 926553 1 T G scaffold15435 ScafM INDEL 0037.scaffold00140 926555 1 . T scaffold15435 ScafM SNP 0037.scaffold00140 926557 1 A G scaffold15435 ScafM SNP 0037.scaffold00140 926566 1 C A scaffold15435 ScafM INDEL 0037.scaffold00140 955006 1 A . scaffold4347 ScafM INDEL 0037.scaffold00140 956560 1 A . scaffold4347 ScafM SNP 0037.scaffold00140 956570 1 G A scaffold4347 ScafM SNP 0037.scaffold00140 956581 1 C G scaffold4347 ScafM SNP 0037.scaffold00140 956614 1 C T scaffold4347 ScafM SNP 0037.scaffold00140 956639 1 G A scaffold4347 ScafM SNP 0037.scaffold00140 956643 1 C T scaffold4347 ScafM SNP 0037.scaffold00140 956654 1 G T scaffold4347 ScafM SNP 0037.scaffold00140 956719 1 C T scaffold4347 Both SNP 0037.scaffold00140 956870 1 C T scaffold4347 ScafM SNP 0037.scaffold00140 959515 1 A C scaffold4347 ScafM SNP 0037.scaffold00140 959608 1 G A scaffold4347 ScafM SNP 0037.scaffold00140 959928 1 T G scaffold4347 ScafM SNP 0037.scaffold00140 960094 1 T C scaffold4347 ScafM SNP 0037.scaffold00140 960497 1 T A scaffold4347 ScafM SNP 0037.scaffold00140 960532 1 C A scaffold4347 ScafM SNP 0037.scaffold00140 960570 1 T C scaffold4347 ScafM INDEL 0037.scaffold00140 960616 1 . T scaffold4347 ScafM INDEL 0037.scaffold00140 980368 1 . A scaffold4347 ScafM INDEL 0037.scaffold00140 992649 4 .... AAAA scaffold4347 ScafM SNP 0037.scaffold00140 1002798 1 G A scaffold4347 ReadM INDEL 0037.scaffold00140 1038502 1 . A - ReadM SNP 0037.scaffold00140 1049020 1 C T - ScafM SNP 0037.scaffold00140 1061531 1 C G scaffold1695 ScafM SNP 0037.scaffold00140 1061536 1 T C scaffold1695 ReadM SNP 0038.scaffold00149 485 1 A G - ReadM SNP 0038.scaffold00149 551 1 A G - ReadM SNP 0038.scaffold00149 553 1 C T - ReadM SNP 0038.scaffold00149 591 1 T C - ReadM SNP 0038.scaffold00149 655 1 G A - ReadM SNP 0038.scaffold00149 804 1 C T - ReadM SNP 0038.scaffold00149 898 1 G A - ReadM SNP 0038.scaffold00149 995 1 A C - ReadM SNP 0038.scaffold00149 1263 1 A G - ReadM SNP 0038.scaffold00149 1414 1 A G - Both SNP 0038.scaffold00149 1515 1 T C scaffold20755 Both SNP 0038.scaffold00149 1618 1 C A scaffold20755 Both SNP 0038.scaffold00149 1633 1 C A scaffold20755 Both SNP 0038.scaffold00149 1742 1 T C scaffold20755 Both SNP 0038.scaffold00149 1789 1 C T scaffold20755 ReadM SNP 0038.scaffold00149 1857 1 G A - ReadM SNP 0038.scaffold00149 1910 1 A C - ReadM SNP 0038.scaffold00149 1970 1 T G - ReadM SNP 0038.scaffold00149 2133 1 A G - ReadM SNP 0038.scaffold00149 2177 1 C T - ReadM SNP 0038.scaffold00149 2278 1 C T - ReadM SNP 0038.scaffold00149 2406 1 T A - ReadM SNP 0038.scaffold00149 2483 1 C T - ReadM SNP 0038.scaffold00149 2618 1 C G - ReadM SNP 0038.scaffold00149 2759 1 G A - ReadM SNP 0038.scaffold00149 2770 1 G A - ReadM SNP 0038.scaffold00149 2830 1 G A - ReadM SNP 0038.scaffold00149 2968 1 A G - ReadM SNP 0038.scaffold00149 3150 1 T C - ReadM SNP 0038.scaffold00149 3209 1 C T - ReadM SNP 0038.scaffold00149 3239 1 G C - ReadM SNP 0038.scaffold00149 3243 1 C T - ReadM SNP 0038.scaffold00149 3397 1 A G - ReadM SNP 0038.scaffold00149 3464 1 G T - ReadM SNP 0038.scaffold00149 3548 1 A G - ReadM SNP 0038.scaffold00149 3766 1 G T - ReadM SNP 0038.scaffold00149 3808 1 A G - ReadM SNP 0038.scaffold00149 3875 1 A G - ReadM SNP 0038.scaffold00149 4823 1 A G - ReadM SNP 0038.scaffold00149 4928 1 A T - ReadM SNP 0038.scaffold00149 4953 1 A G - ReadM SNP 0038.scaffold00149 5203 1 G A - ReadM SNP 0038.scaffold00149 5781 1 A T - ReadM SNP 0038.scaffold00149 5810 1 A C - ReadM SNP 0038.scaffold00149 6053 1 T C - ReadM SNP 0038.scaffold00149 6074 1 A C - ReadM INDEL 0038.scaffold00149 6303 1 A . - ReadM SNP 0038.scaffold00149 6344 1 T C - ReadM SNP 0038.scaffold00149 6346 1 G A - ReadM SNP 0038.scaffold00149 6504 1 C A - ReadM SNP 0038.scaffold00149 6577 1 C T - ReadM SNP 0038.scaffold00149 6758 1 A G - ReadM SNP 0038.scaffold00149 6772 1 T G - ReadM SNP 0038.scaffold00149 7053 2 CC AT - ReadM SNP 0038.scaffold00149 7228 1 T G - ReadM SNP 0038.scaffold00149 7422 1 A G - ReadM SNP 0038.scaffold00149 7559 1 G T - ReadM SNP 0038.scaffold00149 7695 1 C T - ReadM SNP 0038.scaffold00149 8166 1 G A - ReadM SNP 0038.scaffold00149 8265 1 T C - ReadM SNP 0038.scaffold00149 8284 1 A G - ReadM SNP 0038.scaffold00149 8291 1 A G - ReadM SNP 0038.scaffold00149 8478 1 T C - ReadM SNP 0038.scaffold00149 9101 1 T C - ReadM SNP 0038.scaffold00149 9164 1 C T - ReadM INDEL 0038.scaffold00149 9354 1 . A - ReadM SNP 0038.scaffold00149 9421 1 A C - ReadM SNP 0038.scaffold00149 9702 1 T C - ReadM SNP 0038.scaffold00149 9744 2 TT GC - ReadM SNP 0038.scaffold00149 9826 1 T C - ReadM SNP 0038.scaffold00149 9902 1 G C - ReadM SNP 0038.scaffold00149 10075 1 T G - ReadM SNP 0038.scaffold00149 10120 1 T C - ReadM SNP 0038.scaffold00149 10205 1 A G - ReadM SNP 0038.scaffold00149 10404 1 A G - ReadM SNP 0038.scaffold00149 11022 1 T A - ReadM SNP 0038.scaffold00149 11053 1 G A - ReadM INDEL 0038.scaffold00149 11077 1 A . - Both SNP 0038.scaffold00149 11203 1 A G scaffold4790 ReadM SNP 0038.scaffold00149 11792 1 T C - ReadM SNP 0038.scaffold00149 11957 1 A G - ReadM SNP 0038.scaffold00149 11986 1 T C - ReadM SNP 0038.scaffold00149 12059 1 G A - ReadM SNP 0038.scaffold00149 12072 1 G A - ReadM SNP 0038.scaffold00149 12147 1 A G - ReadM SNP 0038.scaffold00149 12163 1 C T - ReadM SNP 0038.scaffold00149 12227 1 G T - ReadM SNP 0038.scaffold00149 12302 1 T C - ReadM SNP 0038.scaffold00149 12483 1 A G - ReadM SNP 0038.scaffold00149 12544 1 C T - ReadM SNP 0038.scaffold00149 12672 1 C A - ReadM SNP 0038.scaffold00149 12817 1 T A - ReadM SNP 0038.scaffold00149 12885 1 T C - ReadM SNP 0038.scaffold00149 13006 1 A G - ReadM SNP 0038.scaffold00149 13043 1 G A - ReadM SNP 0038.scaffold00149 13066 1 A G - ReadM SNP 0038.scaffold00149 13084 1 T C - ReadM SNP 0038.scaffold00149 13136 1 G A - ReadM SNP 0038.scaffold00149 13263 1 C G - ReadM SNP 0038.scaffold00149 13666 1 T G - ReadM SNP 0038.scaffold00149 13984 1 G A - ReadM INDEL 0038.scaffold00149 14116 1 A . - ReadM SNP 0038.scaffold00149 14273 1 C T - ReadM SNP 0038.scaffold00149 14467 1 A G - ReadM SNP 0038.scaffold00149 14550 2 TT CC - ReadM SNP 0038.scaffold00149 14580 1 C T - ReadM SNP 0038.scaffold00149 14883 1 G C - ReadM SNP 0038.scaffold00149 14929 1 T G - ReadM SNP 0038.scaffold00149 15162 1 C T - ReadM SNP 0038.scaffold00149 15310 1 C G - ReadM SNP 0038.scaffold00149 15603 1 C G - Both SNP 0038.scaffold00149 15686 1 G C scaffold4790 Both SNP 0038.scaffold00149 15759 1 C G scaffold4790 ReadM SNP 0038.scaffold00149 15951 1 T C - ReadM SNP 0038.scaffold00149 16008 1 C T - ReadM SNP 0038.scaffold00149 16112 1 T C - ReadM SNP 0038.scaffold00149 16378 1 T C - ReadM SNP 0038.scaffold00149 16388 1 A C - ReadM SNP 0038.scaffold00149 16439 1 T C - ReadM SNP 0038.scaffold00149 16602 1 C T - ReadM SNP 0038.scaffold00149 16727 1 T A - ReadM SNP 0038.scaffold00149 16854 1 A G - ReadM SNP 0038.scaffold00149 16869 1 G A - ReadM SNP 0038.scaffold00149 17091 1 C T - Both SNP 0038.scaffold00149 17144 1 C T scaffold4790 ReadM SNP 0038.scaffold00149 17298 1 C A - ReadM SNP 0038.scaffold00149 17760 1 C T - ReadM SNP 0038.scaffold00149 17835 1 A T - ReadM SNP 0038.scaffold00149 17896 1 A T - ReadM SNP 0038.scaffold00149 17965 1 A G - ReadM SNP 0038.scaffold00149 18106 1 G T - ReadM SNP 0038.scaffold00149 18339 1 G A - ReadM SNP 0038.scaffold00149 18438 1 T G - ReadM SNP 0038.scaffold00149 18598 1 T A - ReadM SNP 0038.scaffold00149 18619 1 T C - ReadM SNP 0038.scaffold00149 18823 1 T C - ReadM SNP 0038.scaffold00149 18922 1 G A - ReadM SNP 0038.scaffold00149 19041 1 T C - ReadM SNP 0038.scaffold00149 19583 1 A C - ReadM SNP 0038.scaffold00149 19656 1 T C - ReadM SNP 0038.scaffold00149 19795 1 C T - ReadM SNP 0038.scaffold00149 19924 1 T C - ReadM SNP 0038.scaffold00149 20675 1 A G - ReadM SNP 0038.scaffold00149 21784 1 G A - ReadM SNP 0038.scaffold00149 21950 1 A G - ReadM SNP 0038.scaffold00149 22810 1 G A - ReadM SNP 0038.scaffold00149 22846 1 G A - ReadM SNP 0038.scaffold00149 23623 1 C T - ReadM SNP 0038.scaffold00149 24171 1 G T - ReadM SNP 0038.scaffold00149 24215 1 C T - ReadM SNP 0038.scaffold00149 24328 1 C T - ReadM SNP 0038.scaffold00149 24334 1 A G - ReadM SNP 0038.scaffold00149 24361 1 G A - ReadM SNP 0038.scaffold00149 24614 1 C T - ReadM SNP 0038.scaffold00149 24672 1 T A - Both SNP 0038.scaffold00149 25139 1 C T scaffold4790 ReadM SNP 0038.scaffold00149 25298 1 A G - ReadM SNP 0038.scaffold00149 25301 1 A G - Both SNP 0038.scaffold00149 25387 1 G A scaffold4790 Both SNP 0038.scaffold00149 25420 1 G A scaffold4790 Both SNP 0038.scaffold00149 25463 1 C T scaffold4790 Both SNP 0038.scaffold00149 25834 1 T G scaffold4790 ScafM INDEL 0038.scaffold00149 26262 1 . A scaffold4790 ScafM SNP 0038.scaffold00149 26931 1 T C scaffold4790 ReadM SNP 0038.scaffold00149 27184 1 T C - ReadM SNP 0038.scaffold00149 27258 1 G T - ReadM SNP 0038.scaffold00149 27456 1 A G - Both SNP 0038.scaffold00149 27677 1 C T scaffold4790 Both SNP 0038.scaffold00149 27755 1 C A scaffold4790 Both SNP 0038.scaffold00149 27970 1 T G scaffold4790 ReadM SNP 0038.scaffold00149 28362 1 G T - ReadM SNP 0038.scaffold00149 28905 1 C T - ReadM SNP 0038.scaffold00149 28964 1 G A - ReadM SNP 0038.scaffold00149 29614 1 A T - ReadM SNP 0038.scaffold00149 29617 1 T A - ReadM INDEL 0038.scaffold00149 29635 1 . A - ReadM SNP 0038.scaffold00149 29726 1 G A - ScafM SNP 0038.scaffold00149 29802 2 AA TT scaffold4790 ScafM SNP 0038.scaffold00149 29827 1 G A scaffold4790 ScafM SNP 0038.scaffold00149 29830 1 C T scaffold4790 Both SNP 0038.scaffold00149 30316 1 A G scaffold4790 ReadM SNP 0038.scaffold00149 30628 1 A C - ReadM SNP 0038.scaffold00149 30798 1 A G - ReadM SNP 0038.scaffold00149 31060 1 C T - ReadM SNP 0038.scaffold00149 31480 1 C T - ReadM SNP 0038.scaffold00149 31639 1 C T - ReadM SNP 0038.scaffold00149 31731 1 T G - ReadM SNP 0038.scaffold00149 32007 1 T C - Both SNP 0038.scaffold00149 33685 1 C T scaffold4790 ReadM SNP 0038.scaffold00149 33806 1 C G - ReadM SNP 0038.scaffold00149 33810 1 G C - ReadM SNP 0038.scaffold00149 34541 1 T G - ReadM SNP 0038.scaffold00149 34630 1 A G - ReadM SNP 0038.scaffold00149 34656 1 G A - ReadM SNP 0038.scaffold00149 34881 1 G A - ReadM SNP 0038.scaffold00149 36041 1 C G - ReadM SNP 0038.scaffold00149 36069 1 G A - ReadM SNP 0038.scaffold00149 36282 1 T G - ReadM SNP 0038.scaffold00149 36756 1 A T - ReadM SNP 0038.scaffold00149 37033 1 C T - ReadM SNP 0038.scaffold00149 37141 1 T C - ReadM SNP 0038.scaffold00149 37155 1 T C - ReadM SNP 0038.scaffold00149 37300 1 T A - ReadM SNP 0038.scaffold00149 37304 1 C A - ReadM SNP 0038.scaffold00149 39396 1 G C - ReadM INDEL 0038.scaffold00149 39470 1 A . - ReadM SNP 0038.scaffold00149 39600 1 G A - ReadM SNP 0038.scaffold00149 39701 1 G A - ReadM SNP 0038.scaffold00149 39930 1 C G - ScafM SNP 0038.scaffold00149 40270 1 T C scaffold43 ReadM SNP 0038.scaffold00149 43026 1 C T - ReadM SNP 0038.scaffold00149 43513 1 A G - ReadM SNP 0038.scaffold00149 44163 1 T G - ReadM SNP 0038.scaffold00149 45824 1 T C - ReadM SNP 0038.scaffold00149 45975 1 C T - ReadM SNP 0038.scaffold00149 46222 1 A G - ReadM SNP 0038.scaffold00149 46559 1 A G - ReadM SNP 0038.scaffold00149 46688 1 A T - ReadM SNP 0038.scaffold00149 48931 1 A G - ReadM SNP 0038.scaffold00149 49000 1 A G - ReadM SNP 0038.scaffold00149 64045 1 A G - ReadM SNP 0038.scaffold00149 64322 1 C T - ReadM SNP 0038.scaffold00149 64384 1 A G - ReadM SNP 0038.scaffold00149 64463 1 G T - ReadM SNP 0038.scaffold00149 64576 1 T C - ReadM SNP 0038.scaffold00149 64682 1 G A - ReadM INDEL 0038.scaffold00149 64750 1 A . - ReadM SNP 0038.scaffold00149 64818 1 G A - ReadM SNP 0038.scaffold00149 64973 1 T C - ReadM SNP 0038.scaffold00149 65104 1 A G - ReadM SNP 0038.scaffold00149 65183 1 C A - ReadM SNP 0038.scaffold00149 65235 1 C T - ReadM SNP 0038.scaffold00149 65318 1 C T - ReadM SNP 0038.scaffold00149 65327 1 G T - ReadM SNP 0038.scaffold00149 65477 1 A T - ReadM SNP 0038.scaffold00149 65606 1 C G - ReadM SNP 0038.scaffold00149 65697 1 A C - ReadM SNP 0038.scaffold00149 65777 1 T C - ReadM SNP 0038.scaffold00149 65833 1 A C - ReadM SNP 0038.scaffold00149 65907 1 G A - ReadM INDEL 0038.scaffold00149 65939 3 ... AAT - ReadM SNP 0038.scaffold00149 66031 1 G A - ReadM SNP 0038.scaffold00149 66184 1 T C - ReadM SNP 0038.scaffold00149 66202 1 A G - ReadM SNP 0038.scaffold00149 66217 1 G T - ReadM SNP 0038.scaffold00149 66552 1 G A - ReadM SNP 0038.scaffold00149 66607 1 G A - ReadM SNP 0038.scaffold00149 67019 1 A G - ReadM SNP 0038.scaffold00149 67094 1 C G - ReadM SNP 0038.scaffold00149 67403 1 T G - ReadM SNP 0038.scaffold00149 67433 1 T A - ReadM SNP 0038.scaffold00149 67863 1 T C - ReadM SNP 0038.scaffold00149 68261 1 T C - ReadM SNP 0038.scaffold00149 68281 1 T C - ReadM SNP 0038.scaffold00149 69094 1 C A - ReadM SNP 0038.scaffold00149 69372 1 C T - ReadM SNP 0038.scaffold00149 69704 1 C T - ReadM SNP 0038.scaffold00149 69783 1 A G - ReadM SNP 0038.scaffold00149 70111 1 A C - ReadM SNP 0038.scaffold00149 70377 1 C A - ReadM SNP 0038.scaffold00149 70526 1 A G - ReadM SNP 0038.scaffold00149 70623 1 A G - ReadM SNP 0038.scaffold00149 70793 1 T G - ReadM SNP 0038.scaffold00149 70915 1 C T - ReadM INDEL 0038.scaffold00149 71230 2 CT .. - ReadM SNP 0038.scaffold00149 71530 1 G A - ReadM SNP 0038.scaffold00149 71771 1 A T - ReadM SNP 0038.scaffold00149 72067 1 T C - ReadM SNP 0038.scaffold00149 72425 1 T C - ReadM SNP 0038.scaffold00149 75259 1 A G - ReadM SNP 0038.scaffold00149 75446 1 A G - ReadM SNP 0038.scaffold00149 75699 1 T C - ReadM SNP 0038.scaffold00149 75734 1 A G - ReadM SNP 0038.scaffold00149 75975 1 C T - ReadM SNP 0038.scaffold00149 76313 1 A T - ReadM SNP 0038.scaffold00149 76336 1 C G - ReadM SNP 0038.scaffold00149 76387 1 A G - ReadM SNP 0038.scaffold00149 78653 1 G A - ReadM SNP 0038.scaffold00149 78715 1 A G - ReadM SNP 0038.scaffold00149 78819 1 G C - ReadM SNP 0038.scaffold00149 78921 1 T C - ReadM SNP 0038.scaffold00149 78962 1 T C - ReadM SNP 0038.scaffold00149 79161 1 T G - ReadM SNP 0038.scaffold00149 79264 1 G A - ReadM SNP 0038.scaffold00149 79421 1 A G - ReadM SNP 0038.scaffold00149 79627 1 G A - ReadM SNP 0038.scaffold00149 79754 1 T A - ReadM SNP 0038.scaffold00149 79789 1 A T - ReadM SNP 0038.scaffold00149 79934 1 G C - ReadM SNP 0038.scaffold00149 80145 1 T G - ScafM SNP 0038.scaffold00149 80819 1 G A scaffold14974 ScafM INDEL 0038.scaffold00149 80863 1 . G scaffold14974 ScafM INDEL 0038.scaffold00149 80870 1 T . scaffold14974 ScafM SNP 0038.scaffold00149 80906 1 A T scaffold14974 ScafM INDEL 0038.scaffold00149 80935 9 ......... AAGGATGAA scaffold14974 ScafM SNP 0038.scaffold00149 80938 1 G A scaffold14974 ScafM SNP 0038.scaffold00149 80968 1 G A scaffold14974 ScafM SNP 0038.scaffold00149 81005 1 C G scaffold14974 ScafM SNP 0038.scaffold00149 81010 1 A G scaffold14974 ScafM INDEL 0038.scaffold00149 81084 2 .. CT scaffold14974 ScafM SNP 0038.scaffold00149 81319 1 A G scaffold14974 ScafM SNP 0038.scaffold00149 81359 1 C G scaffold14974 Both SNP 0038.scaffold00149 81367 1 A G scaffold14974 Both SNP 0038.scaffold00149 81502 1 T C scaffold14974 ScafM SNP 0038.scaffold00149 81549 1 A G scaffold14974 ReadM INDEL 0038.scaffold00149 81610 2 .. AT - ReadM INDEL 0038.scaffold00149 81753 1 . T - ReadM SNP 0038.scaffold00149 83974 1 G A - ReadM SNP 0038.scaffold00149 83979 1 T G - ReadM SNP 0038.scaffold00149 84011 1 C T - ReadM SNP 0038.scaffold00149 84128 1 C T - ReadM SNP 0038.scaffold00149 84145 1 A G - ReadM SNP 0038.scaffold00149 87773 1 A G - ReadM SNP 0038.scaffold00149 88548 1 T G - ReadM SNP 0038.scaffold00149 88954 1 T G - ReadM SNP 0038.scaffold00149 89198 1 A G - ScafM SNP 0038.scaffold00149 89395 1 A G scaffold2796 ReadM SNP 0038.scaffold00149 89978 1 A G - ReadM SNP 0038.scaffold00149 90009 1 A G - ReadM SNP 0038.scaffold00149 90322 1 A G - ReadM SNP 0038.scaffold00149 90346 1 A G - ReadM SNP 0038.scaffold00149 90452 1 A G - ReadM SNP 0038.scaffold00149 90549 1 T C - ReadM SNP 0038.scaffold00149 90828 1 A T - ReadM SNP 0038.scaffold00149 90832 1 G C - ReadM INDEL 0038.scaffold00149 90853 1 . A - ReadM SNP 0038.scaffold00149 91357 1 G T - ReadM SNP 0038.scaffold00149 91801 1 C G - ReadM SNP 0038.scaffold00149 91921 1 C A - ReadM SNP 0038.scaffold00149 92022 1 T G - ReadM SNP 0038.scaffold00149 92100 1 C G - ReadM SNP 0038.scaffold00149 92171 1 T C - ReadM SNP 0038.scaffold00149 92331 1 T G - ReadM SNP 0038.scaffold00149 92627 1 G A - ReadM SNP 0038.scaffold00149 92788 1 C A - ReadM SNP 0038.scaffold00149 92989 1 G A - Both SNP 0038.scaffold00149 93343 1 A T scaffold2796 Both SNP 0038.scaffold00149 93458 1 A G scaffold2796 ReadM SNP 0038.scaffold00149 93740 1 A T - ReadM INDEL 0038.scaffold00149 93893 1 T . - ReadM SNP 0038.scaffold00149 93945 1 T A - ScafM INDEL 0038.scaffold00149 93982 1 A . scaffold2796 ReadM SNP 0038.scaffold00149 94944 1 G A - ReadM SNP 0038.scaffold00149 96279 1 G A - ReadM SNP 0038.scaffold00149 96302 1 G A - ReadM SNP 0038.scaffold00149 97319 1 T C - ReadM SNP 0038.scaffold00149 97533 1 G A - ReadM SNP 0038.scaffold00149 97847 1 C T - ReadM SNP 0038.scaffold00149 97873 1 T G - ReadM SNP 0038.scaffold00149 97920 1 C A - ReadM SNP 0038.scaffold00149 98096 1 A G - ReadM SNP 0038.scaffold00149 98200 1 A T - ReadM INDEL 0038.scaffold00149 98315 1 . A - ReadM SNP 0038.scaffold00149 98429 1 T C - Both SNP 0038.scaffold00149 98578 1 C T scaffold45154 Both SNP 0038.scaffold00149 98825 1 A C scaffold45154 ReadM SNP 0038.scaffold00149 98842 1 T C - ScafM SNP 0038.scaffold00149 100898 1 A C scaffold22366 ReadM SNP 0038.scaffold00149 101435 1 C G - ReadM SNP 0038.scaffold00149 101580 1 A G - ReadM SNP 0038.scaffold00149 102093 1 T A - ReadM SNP 0038.scaffold00149 102467 1 A G - ReadM SNP 0038.scaffold00149 102518 1 A C - ReadM SNP 0038.scaffold00149 102561 1 A G - ReadM SNP 0038.scaffold00149 102661 1 G A - ReadM SNP 0038.scaffold00149 102683 1 T C - ReadM SNP 0038.scaffold00149 102869 1 C T - ReadM SNP 0038.scaffold00149 102884 1 T G - ReadM SNP 0038.scaffold00149 103086 1 G C - ReadM SNP 0038.scaffold00149 103213 1 C A - ReadM SNP 0038.scaffold00149 103665 1 G A - ReadM SNP 0038.scaffold00149 103669 1 A G - ReadM SNP 0038.scaffold00149 103926 1 A C - Both SNP 0038.scaffold00149 104393 1 T C scaffold22366 ReadM SNP 0038.scaffold00149 104910 1 G A - ReadM SNP 0038.scaffold00149 104936 1 T C - ReadM SNP 0038.scaffold00149 104971 1 T C - Both SNP 0038.scaffold00149 105250 1 G A scaffold22366 Both SNP 0038.scaffold00149 105418 1 A T scaffold22366 Both SNP 0038.scaffold00149 105482 1 T G scaffold22366 ReadM SNP 0038.scaffold00149 105539 1 A G - ReadM SNP 0038.scaffold00149 105640 1 T C - ReadM INDEL 0038.scaffold00149 105772 1 . T - ReadM SNP 0038.scaffold00149 105865 1 G A - ReadM SNP 0038.scaffold00149 105902 1 C T - ScafM INDEL 0038.scaffold00149 106242 9 ......... ATTTATTTA scaffold22366 ScafM INDEL 0038.scaffold00149 106252 22 ...................... GGGGGGGGGGGTTGGGGGTTTT scaffold22366 Both INDEL 0038.scaffold00149 106398 1 C . scaffold22366 ReadM SNP 0038.scaffold00149 106439 1 C A - ReadM SNP 0038.scaffold00149 106594 1 T C - ReadM SNP 0038.scaffold00149 108483 1 T A - ReadM SNP 0038.scaffold00149 108521 1 G A - Both SNP 0038.scaffold00149 109488 1 T A scaffold22366 Both SNP 0038.scaffold00149 109501 1 G A scaffold22366 ScafM SNP 0038.scaffold00149 109615 1 G A scaffold22366 ScafM SNP 0038.scaffold00149 109628 1 T A scaffold22366 ScafM INDEL 0038.scaffold00149 109659 9 ......... ATTAACAAA scaffold22366 ReadM SNP 0038.scaffold00149 109828 1 T C - ReadM SNP 0038.scaffold00149 109840 1 C T - ReadM SNP 0038.scaffold00149 110050 1 A G - ReadM SNP 0038.scaffold00149 110539 1 A G - Both SNP 0038.scaffold00149 110616 1 G A scaffold22366 ReadM SNP 0038.scaffold00149 110731 1 G T - ReadM SNP 0038.scaffold00149 111361 1 T C - ReadM SNP 0038.scaffold00149 111442 1 C A - ReadM SNP 0038.scaffold00149 111810 1 T C - ReadM SNP 0038.scaffold00149 112193 1 T C - ReadM SNP 0038.scaffold00149 112211 1 A G - ScafM INDEL 0038.scaffold00149 113193 4 .... TCAT scaffold22366 ScafM INDEL 0038.scaffold00149 114163 1 . G scaffold22366 ScafM INDEL 0038.scaffold00149 114172 1 . T scaffold22366 ReadM SNP 0038.scaffold00149 114389 1 G A - ReadM SNP 0038.scaffold00149 114431 1 A C - ReadM SNP 0038.scaffold00149 114561 1 T C - ReadM SNP 0038.scaffold00149 114631 1 A G - ReadM SNP 0038.scaffold00149 115029 1 G A - Both SNP 0038.scaffold00149 115327 1 A G scaffold22366 ReadM SNP 0038.scaffold00149 115749 1 G T - ReadM SNP 0038.scaffold00149 115799 1 T A - ReadM SNP 0038.scaffold00149 115896 1 G A - Both SNP 0038.scaffold00149 116048 1 A G scaffold22366 ReadM SNP 0038.scaffold00149 116250 1 A C - ReadM SNP 0038.scaffold00149 116498 1 A G - ReadM SNP 0038.scaffold00149 116502 1 A G - ReadM SNP 0038.scaffold00149 116594 1 C T - ReadM SNP 0038.scaffold00149 116651 1 A G - ReadM SNP 0038.scaffold00149 116814 1 A G - ReadM SNP 0038.scaffold00149 116834 1 T C - ReadM SNP 0038.scaffold00149 116904 1 G A - ReadM SNP 0038.scaffold00149 116961 1 T C - ReadM SNP 0038.scaffold00149 117024 1 C T - ReadM SNP 0038.scaffold00149 117128 1 A G - ReadM SNP 0038.scaffold00149 117241 1 A G - ReadM SNP 0038.scaffold00149 117256 1 A G - ReadM SNP 0038.scaffold00149 117404 1 C G - ReadM SNP 0038.scaffold00149 117690 1 C T - ReadM SNP 0038.scaffold00149 117853 1 T C - ReadM SNP 0038.scaffold00149 118660 1 G A - ReadM SNP 0038.scaffold00149 118813 1 G A - ReadM SNP 0038.scaffold00149 119350 1 G A - ReadM SNP 0038.scaffold00149 119400 1 T G - ReadM SNP 0038.scaffold00149 119403 1 T C - ReadM SNP 0038.scaffold00149 119924 1 T C - ScafM SNP 0038.scaffold00149 120514 2 AG GA scaffold154 ScafM SNP 0038.scaffold00149 121269 1 T A scaffold154 ScafM SNP 0038.scaffold00149 121355 1 C T scaffold154 ScafM SNP 0038.scaffold00149 121371 1 A C scaffold154 ScafM SNP 0038.scaffold00149 121427 1 T C scaffold154 ScafM SNP 0038.scaffold00149 121589 1 C T scaffold154 ScafM SNP 0038.scaffold00149 121602 1 G C scaffold154 ScafM SNP 0038.scaffold00149 121708 1 G T scaffold154 ReadM SNP 0038.scaffold00149 122841 1 C T - ReadM SNP 0038.scaffold00149 123178 1 A C - Both SNP 0038.scaffold00149 123306 1 T A scaffold154 Both SNP 0038.scaffold00149 123352 1 A T scaffold154 ReadM SNP 0038.scaffold00149 123536 1 T C - ReadM SNP 0038.scaffold00149 123567 1 A G - ReadM SNP 0038.scaffold00149 123697 1 T C - ReadM SNP 0038.scaffold00149 123707 1 C T - ReadM SNP 0038.scaffold00149 123717 1 A G - ReadM INDEL 0038.scaffold00149 123743 1 . T - ReadM SNP 0038.scaffold00149 123755 1 C G - Both SNP 0038.scaffold00149 123854 1 T C scaffold154 ReadM INDEL 0038.scaffold00149 123937 2 .. AA - ReadM SNP 0038.scaffold00149 123980 1 C T - ReadM INDEL 0038.scaffold00149 124187 3 TTT ... - ReadM SNP 0038.scaffold00149 124477 1 G A - ReadM SNP 0038.scaffold00149 124568 1 G A - ReadM SNP 0038.scaffold00149 124767 1 A G - ReadM INDEL 0038.scaffold00149 124822 1 . C - ScafM SNP 0038.scaffold00149 124896 1 G A scaffold154 ScafM SNP 0038.scaffold00149 124960 1 G A scaffold154 ScafM SNP 0038.scaffold00149 125074 1 A C scaffold154 Both INDEL 0038.scaffold00149 125162 1 . T scaffold154 Both SNP 0038.scaffold00149 125247 1 T C scaffold154 ScafM INDEL 0038.scaffold00149 125430 63 GAAATGACTCTATCAGCAATAAATAAATAGAATCAAAGCATTCATCAATAATAGATTAATCAT ............................................................... scaffold154 ReadM INDEL 0038.scaffold00149 126346 1 . T - ReadM SNP 0038.scaffold00149 126721 1 C G - ReadM SNP 0038.scaffold00149 126727 1 G A - ReadM INDEL 0038.scaffold00149 127071 1 . T - ReadM SNP 0038.scaffold00149 127165 1 G A - ReadM INDEL 0038.scaffold00149 127724 1 T . - ReadM SNP 0038.scaffold00149 127867 1 G C - ReadM SNP 0038.scaffold00149 128003 1 A G - ReadM SNP 0038.scaffold00149 128384 1 A C - ReadM SNP 0038.scaffold00149 128599 1 A T - ReadM INDEL 0038.scaffold00149 128643 2 .. TT - ReadM SNP 0038.scaffold00149 129407 1 T G - Both SNP 0038.scaffold00149 129548 1 A C scaffold154 ScafM SNP 0038.scaffold00149 129622 1 G A scaffold154 ScafM SNP 0038.scaffold00149 129734 1 A G scaffold154 ScafM SNP 0038.scaffold00149 129754 1 T C scaffold154 Both SNP 0038.scaffold00149 129774 1 A T scaffold154 ScafM INDEL 0038.scaffold00149 129863 3 ... TCT scaffold154 ScafM SNP 0038.scaffold00149 129881 1 C T scaffold154 ScafM SNP 0038.scaffold00149 129889 1 T C scaffold154 Both SNP 0038.scaffold00149 129944 1 G A scaffold154 Both SNP 0038.scaffold00149 129988 1 A G scaffold154 Both SNP 0038.scaffold00149 130007 1 T A scaffold154 Both SNP 0038.scaffold00149 130014 1 A C scaffold154 Both SNP 0038.scaffold00149 130082 1 C G scaffold154 Both SNP 0038.scaffold00149 130184 1 C T scaffold154 Both SNP 0038.scaffold00149 130219 1 T G scaffold154 Both SNP 0038.scaffold00149 130295 1 G A scaffold154 ScafM SNP 0038.scaffold00149 130349 2 GT CC scaffold154 Both SNP 0038.scaffold00149 130592 1 G T scaffold154 Both SNP 0038.scaffold00149 130634 1 A T scaffold154 Both SNP 0038.scaffold00149 130811 1 G T scaffold154 Both SNP 0038.scaffold00149 130829 1 G A scaffold154 Both SNP 0038.scaffold00149 130922 1 A T scaffold154 ScafM SNP 0038.scaffold00149 130992 2 GT AA scaffold154 Both SNP 0038.scaffold00149 131018 1 C T scaffold154 Both SNP 0038.scaffold00149 131059 1 A C scaffold154 Both SNP 0038.scaffold00149 131089 1 A G scaffold154 Both SNP 0038.scaffold00149 131119 1 C G scaffold154 Both SNP 0038.scaffold00149 131384 1 A G scaffold154 ScafM SNP 0038.scaffold00149 131749 1 C T scaffold154 ScafM INDEL 0038.scaffold00149 131881 4 .... ATAT scaffold154 Both SNP 0038.scaffold00149 131923 1 C T scaffold154 ScafM INDEL 0038.scaffold00149 132108 3 ... AAA scaffold154 ScafM SNP 0038.scaffold00149 132110 1 G A scaffold154 ScafM SNP 0038.scaffold00149 132114 1 A G scaffold154 ScafM SNP 0038.scaffold00149 132138 1 T C scaffold154 ScafM SNP 0038.scaffold00149 132209 1 C T scaffold154 ScafM INDEL 0038.scaffold00149 132222 1 G . scaffold154 ScafM SNP 0038.scaffold00149 132277 1 T C scaffold154 ScafM INDEL 0038.scaffold00149 132363 1 . T scaffold154 ScafM INDEL 0038.scaffold00149 132365 6 ...... ACCTAA scaffold154 Both SNP 0038.scaffold00149 132389 1 T C scaffold154 Both SNP 0038.scaffold00149 132506 1 G C scaffold154 ReadM SNP 0038.scaffold00149 132626 1 C T - Both SNP 0038.scaffold00149 132703 1 C A scaffold154 Both SNP 0038.scaffold00149 132797 1 T G scaffold154 Both SNP 0038.scaffold00149 132805 1 A G scaffold154 ReadM SNP 0038.scaffold00149 133008 1 G C - ReadM SNP 0038.scaffold00149 133028 1 A G - ReadM SNP 0038.scaffold00149 133032 1 G A - ReadM SNP 0038.scaffold00149 133086 1 T C - ReadM SNP 0038.scaffold00149 133172 1 C T - ReadM SNP 0038.scaffold00149 133197 1 T C - ReadM INDEL 0038.scaffold00149 133235 2 GA .. - ReadM SNP 0038.scaffold00149 133304 1 T C - ReadM SNP 0038.scaffold00149 133376 1 A C - ReadM SNP 0038.scaffold00149 133496 1 C A - ReadM SNP 0038.scaffold00149 133601 1 G C - ReadM SNP 0038.scaffold00149 133693 1 C T - Both SNP 0038.scaffold00149 134025 1 A T scaffold154 ReadM SNP 0038.scaffold00149 134157 1 G T - ScafM SNP 0038.scaffold00149 134368 1 C T scaffold154 Both SNP 0038.scaffold00149 134479 1 T G scaffold154 ReadM SNP 0038.scaffold00149 134515 1 A G - ReadM SNP 0038.scaffold00149 135816 1 A G - ReadM SNP 0038.scaffold00149 135862 1 T C - ReadM INDEL 0038.scaffold00149 136285 2 .. AG - ReadM SNP 0038.scaffold00149 136340 1 T C - ReadM SNP 0038.scaffold00149 136404 1 T A - ReadM SNP 0038.scaffold00149 136410 1 C T - ReadM SNP 0038.scaffold00149 136489 1 C T - ReadM SNP 0038.scaffold00149 136529 1 A G - ReadM SNP 0038.scaffold00149 136740 1 T C - ReadM SNP 0038.scaffold00149 136867 1 A T - ReadM SNP 0038.scaffold00149 136890 1 A G - ReadM SNP 0038.scaffold00149 136949 1 T C - ReadM SNP 0038.scaffold00149 137062 1 G A - ReadM SNP 0038.scaffold00149 137106 1 G T - ReadM SNP 0038.scaffold00149 137203 1 C G - ReadM SNP 0038.scaffold00149 137269 1 G A - ReadM SNP 0038.scaffold00149 137306 1 T C - ReadM SNP 0038.scaffold00149 137381 1 C T - ReadM SNP 0038.scaffold00149 137521 1 G A - ReadM SNP 0038.scaffold00149 137550 1 A T - ReadM SNP 0038.scaffold00149 137614 1 C T - ReadM SNP 0038.scaffold00149 137634 1 G A - ReadM SNP 0038.scaffold00149 137670 1 T G - Both SNP 0038.scaffold00149 137992 1 T G scaffold154 Both INDEL 0038.scaffold00149 138009 1 A . scaffold154 ReadM SNP 0038.scaffold00149 138067 1 G A - ReadM SNP 0038.scaffold00149 138103 1 T C - ReadM SNP 0038.scaffold00149 138134 1 G C - ReadM SNP 0038.scaffold00149 138257 1 C T - ReadM SNP 0038.scaffold00149 138308 1 C A - ReadM SNP 0038.scaffold00149 138317 1 T C - ReadM SNP 0038.scaffold00149 138505 1 G A - ReadM SNP 0038.scaffold00149 138527 1 G A - ReadM SNP 0038.scaffold00149 138565 1 A G - ReadM SNP 0038.scaffold00149 138626 1 T A - ReadM SNP 0038.scaffold00149 138726 1 T C - ReadM SNP 0038.scaffold00149 138764 1 T C - ReadM SNP 0038.scaffold00149 138814 1 T C - ReadM SNP 0038.scaffold00149 138877 1 C T - ReadM SNP 0038.scaffold00149 138945 1 A T - ReadM INDEL 0038.scaffold00149 138984 2 AA .. - ReadM SNP 0038.scaffold00149 139023 1 C A - ReadM SNP 0038.scaffold00149 139032 1 G A - ReadM SNP 0038.scaffold00149 139045 1 T C - ReadM INDEL 0038.scaffold00149 139137 2 .. TT - ReadM SNP 0038.scaffold00149 139238 1 C T - ReadM INDEL 0038.scaffold00149 139326 1 A . - ReadM SNP 0038.scaffold00149 139353 1 C T - ReadM SNP 0038.scaffold00149 139424 1 G A - ReadM SNP 0038.scaffold00149 139426 1 G A - ReadM SNP 0038.scaffold00149 139450 1 G T - ReadM SNP 0038.scaffold00149 139489 1 T A - ReadM SNP 0038.scaffold00149 139547 1 A G - ReadM SNP 0038.scaffold00149 139684 1 C A - ReadM SNP 0038.scaffold00149 139691 1 C T - ReadM SNP 0038.scaffold00149 139723 1 G A - ReadM SNP 0038.scaffold00149 139779 1 T C - ReadM SNP 0038.scaffold00149 139882 1 C T - ReadM SNP 0038.scaffold00149 140796 2 TT AC - ReadM SNP 0038.scaffold00149 141400 1 T C - ReadM SNP 0038.scaffold00149 141520 1 C T - ReadM SNP 0038.scaffold00149 141579 1 C A - ReadM SNP 0038.scaffold00149 141662 1 A G - ReadM SNP 0038.scaffold00149 141674 1 A G - ReadM SNP 0038.scaffold00149 141708 1 T C - ReadM SNP 0038.scaffold00149 141717 1 G A - ReadM SNP 0038.scaffold00149 141860 1 A T - ReadM SNP 0038.scaffold00149 141866 1 T G - ReadM SNP 0038.scaffold00149 142053 1 C T - ReadM SNP 0038.scaffold00149 142126 1 C T - ReadM SNP 0038.scaffold00149 142160 1 C G - ReadM INDEL 0038.scaffold00149 142345 1 T . - ReadM SNP 0038.scaffold00149 142395 1 A C - ReadM SNP 0038.scaffold00149 142400 1 G T - ReadM SNP 0038.scaffold00149 142474 1 T C - ReadM SNP 0038.scaffold00149 142540 1 C T - ReadM SNP 0038.scaffold00149 142568 1 G A - ReadM SNP 0038.scaffold00149 142588 1 T C - ReadM SNP 0038.scaffold00149 142656 1 C T - ReadM SNP 0038.scaffold00149 142700 1 C T - ReadM SNP 0038.scaffold00149 142748 1 C G - ReadM SNP 0038.scaffold00149 142786 1 G A - ReadM SNP 0038.scaffold00149 142876 1 C T - ReadM SNP 0038.scaffold00149 142881 1 C T - ReadM SNP 0038.scaffold00149 142949 1 T C - ReadM SNP 0038.scaffold00149 142955 1 G A - ReadM SNP 0038.scaffold00149 143068 1 T C - ReadM SNP 0038.scaffold00149 143071 1 A C - ReadM SNP 0038.scaffold00149 143140 1 G A - ReadM SNP 0038.scaffold00149 143160 1 G A - ReadM SNP 0038.scaffold00149 143319 1 T C - ReadM SNP 0038.scaffold00149 143371 1 T C - ReadM SNP 0038.scaffold00149 143396 1 G A - ReadM SNP 0038.scaffold00149 143446 1 T C - ScafM SNP 0038.scaffold00149 146198 1 A C scaffold2207 ScafM SNP 0038.scaffold00149 146200 1 C A scaffold2207 Both INDEL 0038.scaffold00149 151665 1 . A scaffold2207 ScafM INDEL 0038.scaffold00149 151724 1 . T scaffold2207 ReadM SNP 0038.scaffold00149 152537 1 T A - ReadM SNP 0038.scaffold00149 152554 1 T C - ReadM SNP 0038.scaffold00149 152703 1 G A - ReadM SNP 0038.scaffold00149 152722 1 G C - ReadM INDEL 0038.scaffold00149 152817 1 . C - ReadM SNP 0038.scaffold00149 152916 1 G A - ReadM SNP 0038.scaffold00149 152931 1 C A - ReadM INDEL 0038.scaffold00149 152969 1 . C - ReadM SNP 0038.scaffold00149 153002 1 T G - ReadM SNP 0038.scaffold00149 153027 1 T G - ReadM SNP 0038.scaffold00149 153052 1 A G - ReadM SNP 0038.scaffold00149 153133 1 T A - ReadM INDEL 0038.scaffold00149 153158 1 T . - ReadM SNP 0038.scaffold00149 153201 1 C T - ReadM SNP 0038.scaffold00149 153240 1 C G - ReadM SNP 0038.scaffold00149 153256 1 T C - ReadM SNP 0038.scaffold00149 153294 1 G T - ReadM SNP 0038.scaffold00149 153320 1 G C - ReadM INDEL 0038.scaffold00149 153491 2 CC .. - ReadM SNP 0038.scaffold00149 153519 1 C T - ReadM SNP 0038.scaffold00149 153542 1 C T - ReadM SNP 0038.scaffold00149 153580 1 C T - ReadM SNP 0038.scaffold00149 153585 1 A G - ReadM SNP 0038.scaffold00149 153650 1 G A - ReadM SNP 0038.scaffold00149 153690 1 T G - ReadM SNP 0038.scaffold00149 153720 1 G A - ReadM SNP 0038.scaffold00149 153780 1 C G - ReadM SNP 0038.scaffold00149 153804 1 A G - ReadM SNP 0038.scaffold00149 153890 1 T C - ReadM SNP 0038.scaffold00149 154036 1 C G - ReadM SNP 0038.scaffold00149 154047 1 T C - ReadM SNP 0038.scaffold00149 154089 1 A T - ReadM SNP 0038.scaffold00149 154110 1 C A - ReadM SNP 0038.scaffold00149 154121 1 C G - ReadM SNP 0038.scaffold00149 154319 1 A G - ReadM SNP 0038.scaffold00149 154332 1 T C - ReadM SNP 0038.scaffold00149 154340 1 C T - ReadM SNP 0038.scaffold00149 154419 1 G A - ReadM SNP 0038.scaffold00149 154501 1 A C - ReadM SNP 0038.scaffold00149 154527 1 A C - ReadM SNP 0038.scaffold00149 154565 1 G C - ReadM SNP 0038.scaffold00149 154588 1 T C - ReadM SNP 0038.scaffold00149 154611 1 T G - ReadM SNP 0038.scaffold00149 154637 1 A C - ReadM SNP 0038.scaffold00149 154712 1 A G - ReadM SNP 0038.scaffold00149 154762 1 C G - ReadM SNP 0038.scaffold00149 154774 1 G T - ReadM SNP 0038.scaffold00149 154934 1 C T - ReadM SNP 0038.scaffold00149 154938 1 G A - ReadM SNP 0038.scaffold00149 155008 1 T A - ReadM SNP 0038.scaffold00149 155036 1 C G - ReadM SNP 0038.scaffold00149 155135 1 C T - ReadM SNP 0038.scaffold00149 155270 1 C A - ReadM SNP 0038.scaffold00149 155275 1 G A - ReadM SNP 0038.scaffold00149 155313 1 T A - ReadM SNP 0038.scaffold00149 155414 1 T C - ReadM SNP 0038.scaffold00149 155426 1 G T - ReadM SNP 0038.scaffold00149 155442 1 T C - ReadM INDEL 0038.scaffold00149 155518 2 AA .. - ReadM SNP 0038.scaffold00149 155544 1 T A - ReadM SNP 0038.scaffold00149 155676 1 G C - ReadM SNP 0038.scaffold00149 155791 1 G T - ReadM SNP 0038.scaffold00149 155894 1 T C - ReadM SNP 0038.scaffold00149 155906 1 T G - ReadM SNP 0038.scaffold00149 155919 1 T C - ReadM SNP 0038.scaffold00149 156015 1 T C - ReadM SNP 0038.scaffold00149 157014 1 G A - ReadM SNP 0038.scaffold00149 157164 1 C G - ReadM SNP 0038.scaffold00149 157218 1 A G - ReadM SNP 0038.scaffold00149 157272 1 T G - ReadM SNP 0038.scaffold00149 157290 1 C G - ReadM SNP 0038.scaffold00149 157381 1 A G - ReadM SNP 0038.scaffold00149 157395 1 G C - ReadM SNP 0038.scaffold00149 157401 1 C T - ReadM SNP 0038.scaffold00149 157504 1 A T - ReadM SNP 0038.scaffold00149 157521 1 C T - ReadM SNP 0038.scaffold00149 157630 1 A G - ReadM SNP 0038.scaffold00149 157650 1 T C - ReadM SNP 0038.scaffold00149 157718 1 G A - ReadM SNP 0038.scaffold00149 157777 1 A G - ReadM SNP 0038.scaffold00149 157903 1 C T - ReadM SNP 0038.scaffold00149 157914 1 C G - ReadM SNP 0038.scaffold00149 157929 1 T A - ReadM SNP 0038.scaffold00149 158065 1 A T - Both SNP 0038.scaffold00149 158102 1 A G scaffold154 ReadM SNP 0038.scaffold00149 158301 1 G T - ReadM SNP 0038.scaffold00149 158325 1 A G - ReadM SNP 0038.scaffold00149 158372 1 G A - ReadM SNP 0038.scaffold00149 158383 1 A G - ReadM SNP 0038.scaffold00149 158416 1 A G - ReadM SNP 0038.scaffold00149 158552 1 A T - ReadM SNP 0038.scaffold00149 158570 1 A G - ReadM SNP 0038.scaffold00149 158640 1 T A - ReadM SNP 0038.scaffold00149 158693 1 C A - ReadM SNP 0038.scaffold00149 158701 1 G T - ScafM INDEL 0038.scaffold00149 158815 14 GCACAGGTCTCGAT .............. scaffold154 ScafM SNP 0038.scaffold00149 159050 2 CC TT scaffold154 ScafM SNP 0038.scaffold00149 159062 1 T A scaffold154 ScafM SNP 0038.scaffold00149 159064 2 TT GG scaffold154 Both SNP 0038.scaffold00149 159188 1 C A scaffold154 Both SNP 0038.scaffold00149 159339 1 A T scaffold154 ScafM SNP 0038.scaffold00149 159353 2 TT AA scaffold154 ReadM SNP 0038.scaffold00149 159413 1 A T - ScafM SNP 0038.scaffold00149 159556 2 GA CG scaffold154 ScafM SNP 0038.scaffold00149 159569 1 G A scaffold154 ScafM SNP 0038.scaffold00149 159597 1 A C scaffold154 ScafM SNP 0038.scaffold00149 159602 1 C T scaffold154 Both SNP 0038.scaffold00149 159614 1 C T scaffold154 Both SNP 0038.scaffold00149 159657 1 A T scaffold154 Both SNP 0038.scaffold00149 159683 1 C A scaffold154 Both INDEL 0038.scaffold00149 159714 1 T . scaffold154 Both SNP 0038.scaffold00149 159744 1 A G scaffold154 ScafM INDEL 0038.scaffold00149 159823 4 .... TATA scaffold154 ScafM SNP 0038.scaffold00149 159866 1 A G scaffold154 ScafM SNP 0038.scaffold00149 159901 2 AA TT scaffold154 ScafM INDEL 0038.scaffold00149 159912 1 . T scaffold154 ScafM SNP 0038.scaffold00149 159945 1 T G scaffold154 ScafM SNP 0038.scaffold00149 159984 1 A T scaffold154 ScafM INDEL 0038.scaffold00149 159992 11 TTGTTTGATTG ........... scaffold154 Both SNP 0038.scaffold00149 160107 1 G C scaffold154 Both SNP 0038.scaffold00149 160120 1 G A scaffold154 Both SNP 0038.scaffold00149 160154 1 T C scaffold154 ReadM SNP 0038.scaffold00149 160221 1 G A - ReadM SNP 0038.scaffold00149 160237 1 T C - ReadM SNP 0038.scaffold00149 160441 1 A G - ReadM SNP 0038.scaffold00149 160452 1 C T - ReadM SNP 0038.scaffold00149 160518 1 A C - ReadM SNP 0038.scaffold00149 160524 1 G T - ReadM SNP 0038.scaffold00149 160630 1 T C - ReadM SNP 0038.scaffold00149 160656 1 A T - Both SNP 0038.scaffold00149 160746 1 A C scaffold154 ScafM SNP 0038.scaffold00149 160778 1 T C scaffold154 ScafM SNP 0038.scaffold00149 160799 1 G T scaffold154 ScafM SNP 0038.scaffold00149 160809 1 T C scaffold154 ScafM SNP 0038.scaffold00149 160832 1 A G scaffold154 ScafM SNP 0038.scaffold00149 160839 1 G T scaffold154 ScafM SNP 0038.scaffold00149 160841 1 T A scaffold154 ScafM INDEL 0038.scaffold00149 160843 1 . T scaffold154 ScafM SNP 0038.scaffold00149 160850 1 A G scaffold154 ScafM SNP 0038.scaffold00149 160855 1 T G scaffold154 ScafM SNP 0038.scaffold00149 160880 1 A G scaffold154 ScafM SNP 0038.scaffold00149 160896 2 AA GG scaffold154 ScafM SNP 0038.scaffold00149 160963 1 C G scaffold154 Both SNP 0038.scaffold00149 160973 1 A G scaffold154 Both SNP 0038.scaffold00149 161025 1 C T scaffold154 ScafM SNP 0038.scaffold00149 161059 1 G A scaffold154 ScafM INDEL 0038.scaffold00149 161077 1 C . scaffold154 ScafM SNP 0038.scaffold00149 161098 1 G T scaffold154 Both SNP 0038.scaffold00149 161120 1 T G scaffold154 Both SNP 0038.scaffold00149 161153 1 G A scaffold154 Both SNP 0038.scaffold00149 161284 1 C A scaffold154 Both SNP 0038.scaffold00149 161431 1 A C scaffold154 Both SNP 0038.scaffold00149 161467 1 T C scaffold154 Both SNP 0038.scaffold00149 161492 1 G A scaffold154 Both SNP 0038.scaffold00149 161568 1 C T scaffold154 Both SNP 0038.scaffold00149 161612 1 G A scaffold154 Both SNP 0038.scaffold00149 161646 1 T C scaffold154 Both SNP 0038.scaffold00149 161683 1 G A scaffold154 Both SNP 0038.scaffold00149 161737 1 A G scaffold154 ReadM SNP 0038.scaffold00149 161786 1 G A - ReadM SNP 0038.scaffold00149 161801 1 T A - ReadM SNP 0038.scaffold00149 161837 1 A T - ReadM SNP 0038.scaffold00149 161854 1 G T - ReadM SNP 0038.scaffold00149 161888 1 A G - Both SNP 0038.scaffold00149 161982 1 G A scaffold154 Both INDEL 0038.scaffold00149 162041 1 . A scaffold154 ReadM SNP 0038.scaffold00149 162069 1 T C - ReadM SNP 0038.scaffold00149 162179 1 T C - ReadM SNP 0038.scaffold00149 162203 1 G A - Both SNP 0038.scaffold00149 162355 1 A G scaffold154 Both SNP 0038.scaffold00149 162364 1 C T scaffold154 Both INDEL 0038.scaffold00149 162454 1 . A scaffold154 Both SNP 0038.scaffold00149 162698 1 T C scaffold154 ReadM SNP 0038.scaffold00149 162760 1 G A - ReadM INDEL 0038.scaffold00149 162896 1 C . - ReadM SNP 0038.scaffold00149 162920 1 G T - ReadM SNP 0038.scaffold00149 163010 1 T C - ReadM SNP 0038.scaffold00149 163126 1 C G - ReadM SNP 0038.scaffold00149 163168 1 A G - ReadM SNP 0038.scaffold00149 163292 1 T A - ReadM SNP 0038.scaffold00149 163325 1 T A - ReadM SNP 0038.scaffold00149 163329 1 G A - ReadM INDEL 0038.scaffold00149 163374 1 A . - ReadM SNP 0038.scaffold00149 163591 1 A G - ReadM SNP 0038.scaffold00149 163596 1 T C - ReadM SNP 0038.scaffold00149 163646 1 T G - ReadM SNP 0038.scaffold00149 163759 1 C G - ReadM SNP 0038.scaffold00149 163949 1 T A - ReadM INDEL 0038.scaffold00149 163963 1 T . - ReadM SNP 0038.scaffold00149 163971 1 C A - Both SNP 0038.scaffold00149 164004 1 G A scaffold154 Both SNP 0038.scaffold00149 164087 1 T G scaffold154 Both SNP 0038.scaffold00149 164112 1 T C scaffold154 Both SNP 0038.scaffold00149 164125 1 T C scaffold154 Both SNP 0038.scaffold00149 164286 1 A G scaffold154 Both SNP 0038.scaffold00149 164338 1 A C scaffold154 Both SNP 0038.scaffold00149 164369 1 T C scaffold154 Both SNP 0038.scaffold00149 164487 1 A T scaffold154 Both SNP 0038.scaffold00149 164553 1 C T scaffold154 Both SNP 0038.scaffold00149 164576 1 C A scaffold154 Both SNP 0038.scaffold00149 164623 1 G T scaffold154 Both SNP 0038.scaffold00149 164672 1 T G scaffold154 Both SNP 0038.scaffold00149 164696 1 T C scaffold154 Both SNP 0038.scaffold00149 164733 1 T G scaffold154 Both SNP 0038.scaffold00149 164788 1 T C scaffold154 Both SNP 0038.scaffold00149 164838 1 T A scaffold154 Both SNP 0038.scaffold00149 164910 1 A T scaffold154 ScafM SNP 0038.scaffold00149 164918 2 CG TA scaffold154 Both SNP 0038.scaffold00149 164980 1 C T scaffold154 Both SNP 0038.scaffold00149 165004 1 G A scaffold154 ReadM SNP 0038.scaffold00149 165100 1 A G - Both SNP 0038.scaffold00149 165128 1 A C scaffold154 ReadM SNP 0038.scaffold00149 165185 1 G A - ReadM SNP 0038.scaffold00149 165395 1 G A - ReadM SNP 0038.scaffold00149 165404 1 A T - ReadM SNP 0038.scaffold00149 165458 1 T G - ReadM SNP 0038.scaffold00149 165516 1 A T - ReadM SNP 0038.scaffold00149 165536 1 A G - ReadM INDEL 0038.scaffold00149 165624 1 A . - ReadM SNP 0038.scaffold00149 165766 1 A T - ReadM SNP 0038.scaffold00149 165772 1 C T - ReadM SNP 0038.scaffold00149 165814 1 T C - ReadM SNP 0038.scaffold00149 165865 1 T C - ReadM SNP 0038.scaffold00149 165896 1 C T - ReadM SNP 0038.scaffold00149 165929 1 T G - ReadM SNP 0038.scaffold00149 166009 1 C T - Both SNP 0038.scaffold00149 166014 1 C G scaffold154 Both SNP 0038.scaffold00149 166028 1 G A scaffold154 ReadM SNP 0038.scaffold00149 166237 1 A G - ReadM SNP 0038.scaffold00149 166307 1 A G - ScafM SNP 0038.scaffold00149 167016 1 C G scaffold154 ScafM SNP 0038.scaffold00149 167021 1 A C scaffold154 Both SNP 0038.scaffold00149 167079 1 C A scaffold154 ReadM SNP 0038.scaffold00149 167221 1 T G - ReadM SNP 0038.scaffold00149 167231 1 T A - ReadM SNP 0038.scaffold00149 167387 1 C G - ReadM INDEL 0038.scaffold00149 167478 2 TA .. - ReadM INDEL 0038.scaffold00149 167774 2 TG .. - ReadM SNP 0038.scaffold00149 167838 1 A C - ReadM SNP 0038.scaffold00149 167874 1 G C - ReadM SNP 0038.scaffold00149 167923 1 T G - ReadM SNP 0038.scaffold00149 167941 1 G A - ReadM SNP 0038.scaffold00149 168019 1 G A - ScafM SNP 0038.scaffold00149 178039 1 C T scaffold154 Both SNP 0038.scaffold00149 178374 1 T C scaffold154 Both SNP 0038.scaffold00149 178415 1 C A scaffold154 Both SNP 0038.scaffold00149 178435 1 A T scaffold154 Both SNP 0038.scaffold00149 178494 1 A G scaffold154 ScafM SNP 0038.scaffold00149 178517 1 A C scaffold154 ScafM SNP 0038.scaffold00149 178528 1 C T scaffold154 Both SNP 0038.scaffold00149 178570 1 C T scaffold154 ReadM SNP 0038.scaffold00149 178932 1 C T - ReadM SNP 0038.scaffold00149 178940 1 C T - ReadM SNP 0038.scaffold00149 179081 1 G C - ReadM SNP 0038.scaffold00149 179120 1 A G - ReadM SNP 0038.scaffold00149 179162 1 C T - ReadM SNP 0038.scaffold00149 181828 1 T C - ReadM SNP 0038.scaffold00149 182642 1 A G - ReadM SNP 0038.scaffold00149 182693 1 C T - ReadM SNP 0038.scaffold00149 182701 1 C T - ReadM SNP 0038.scaffold00149 182807 1 T C - ReadM SNP 0038.scaffold00149 182821 1 T A - ReadM SNP 0038.scaffold00149 182841 1 T A - ScafM SNP 0038.scaffold00149 182898 1 A G scaffold154 Both SNP 0038.scaffold00149 182936 1 G A scaffold154 Both SNP 0038.scaffold00149 182973 1 C T scaffold154 Both SNP 0038.scaffold00149 183029 1 C T scaffold154 Both SNP 0038.scaffold00149 183054 1 A G scaffold154 Both SNP 0038.scaffold00149 183073 1 A T scaffold154 ScafM SNP 0038.scaffold00149 183149 1 C T scaffold154 Both SNP 0038.scaffold00149 183283 1 T C scaffold154 Both SNP 0038.scaffold00149 183308 1 A G scaffold154 Both SNP 0038.scaffold00149 183369 1 A C scaffold154 Both INDEL 0038.scaffold00149 183403 1 C . scaffold154 Both SNP 0038.scaffold00149 183442 1 T G scaffold154 Both SNP 0038.scaffold00149 183470 1 G A scaffold154 Both SNP 0038.scaffold00149 183569 1 A T scaffold154 Both SNP 0038.scaffold00149 183572 1 C A scaffold154 Both SNP 0038.scaffold00149 183685 1 A C scaffold154 Both SNP 0038.scaffold00149 183748 1 C A scaffold154 Both SNP 0038.scaffold00149 183752 1 G T scaffold154 ScafM SNP 0038.scaffold00149 183769 1 C T scaffold154 ScafM SNP 0038.scaffold00149 183786 1 T G scaffold154 ScafM SNP 0038.scaffold00149 183823 1 A T scaffold154 ScafM SNP 0038.scaffold00149 183831 1 A T scaffold154 Both SNP 0038.scaffold00149 183868 1 C T scaffold154 Both SNP 0038.scaffold00149 183874 1 A T scaffold154 Both SNP 0038.scaffold00149 183891 1 T G scaffold154 Both SNP 0038.scaffold00149 183984 1 T A scaffold154 Both SNP 0038.scaffold00149 184041 1 C A scaffold154 Both SNP 0038.scaffold00149 184084 1 C A scaffold154 Both SNP 0038.scaffold00149 184143 1 C T scaffold154 Both SNP 0038.scaffold00149 184186 1 C T scaffold154 Both SNP 0038.scaffold00149 184526 2 TT AC scaffold154 Both SNP 0038.scaffold00149 184705 1 G T scaffold154 Both SNP 0038.scaffold00149 184741 1 A T scaffold154 Both SNP 0038.scaffold00149 184893 1 T C scaffold154 Both INDEL 0038.scaffold00149 184943 1 . A scaffold154 Both SNP 0038.scaffold00149 184979 1 T C scaffold154 Both SNP 0038.scaffold00149 185062 1 C T scaffold154 Both SNP 0038.scaffold00149 185114 1 T G scaffold154 Both SNP 0038.scaffold00149 185146 1 G A scaffold154 Both SNP 0038.scaffold00149 185150 1 T C scaffold154 ScafM SNP 0038.scaffold00149 185204 1 T C scaffold154 ScafM INDEL 0038.scaffold00149 185225 4 CCAT .... scaffold154 ScafM SNP 0038.scaffold00149 185259 1 C T scaffold154 ScafM INDEL 0038.scaffold00149 185261 12 ............ CTCTCTCTAAAA scaffold154 Both SNP 0038.scaffold00149 185347 1 C T scaffold154 Both SNP 0038.scaffold00149 185379 1 T C scaffold154 Both SNP 0038.scaffold00149 185391 1 G A scaffold154 ScafM SNP 0038.scaffold00149 185421 2 CT TC scaffold154 Both SNP 0038.scaffold00149 185510 1 C T scaffold154 Both SNP 0038.scaffold00149 185522 1 A T scaffold154 Both SNP 0038.scaffold00149 185541 1 A G scaffold154 ScafM SNP 0038.scaffold00149 185565 1 A G scaffold154 Both SNP 0038.scaffold00149 185614 1 T C scaffold154 ScafM SNP 0038.scaffold00149 185634 2 AC GT scaffold154 Both SNP 0038.scaffold00149 185759 1 G A scaffold154 ScafM SNP 0038.scaffold00149 185779 1 G A scaffold154 ScafM SNP 0038.scaffold00149 185787 1 G A scaffold154 ScafM SNP 0038.scaffold00149 185798 1 A G scaffold154 Both SNP 0038.scaffold00149 185830 1 A G scaffold154 Both SNP 0038.scaffold00149 185884 1 G A scaffold154 Both SNP 0038.scaffold00149 186018 1 C A scaffold154 Both SNP 0038.scaffold00149 186036 1 T A scaffold154 Both SNP 0038.scaffold00149 186043 1 C T scaffold154 Both SNP 0038.scaffold00149 186154 1 A G scaffold154 Both SNP 0038.scaffold00149 186204 1 C T scaffold154 Both INDEL 0038.scaffold00149 186246 1 . T scaffold154 Both SNP 0038.scaffold00149 186255 1 T C scaffold154 Both SNP 0038.scaffold00149 186266 1 T C scaffold154 ScafM SNP 0038.scaffold00149 186327 1 A G scaffold154 Both SNP 0038.scaffold00149 186362 1 A G scaffold154 Both SNP 0038.scaffold00149 186371 1 T C scaffold154 Both SNP 0038.scaffold00149 186407 1 G A scaffold154 ScafM INDEL 0038.scaffold00149 186465 6 TATTAA ...... scaffold154 ScafM SNP 0038.scaffold00149 186483 2 AT GC scaffold154 Both SNP 0038.scaffold00149 186563 1 G A scaffold154 ReadM SNP 0038.scaffold00149 186659 1 C T - ScafM SNP 0038.scaffold00149 186687 1 A T scaffold154 ScafM INDEL 0038.scaffold00149 186695 1 T . scaffold154 ScafM INDEL 0038.scaffold00149 186702 3 TAT ... scaffold154 Both SNP 0038.scaffold00149 186739 1 C G scaffold154 Both SNP 0038.scaffold00149 186744 1 C G scaffold154 Both SNP 0038.scaffold00149 186787 1 T C scaffold154 Both SNP 0038.scaffold00149 186828 1 A G scaffold154 Both SNP 0038.scaffold00149 186831 1 A G scaffold154 ScafM SNP 0038.scaffold00149 186936 1 C T scaffold154 ScafM SNP 0038.scaffold00149 186939 1 A C scaffold154 ScafM SNP 0038.scaffold00149 186941 1 A G scaffold154 ScafM SNP 0038.scaffold00149 186964 1 G A scaffold154 ScafM SNP 0038.scaffold00149 186967 1 A G scaffold154 ScafM SNP 0038.scaffold00149 186980 2 CA TG scaffold154 ScafM SNP 0038.scaffold00149 186998 1 A G scaffold154 ScafM INDEL 0038.scaffold00149 187012 1 A . scaffold154 ScafM SNP 0038.scaffold00149 187024 1 A G scaffold154 ReadM SNP 0038.scaffold00149 187868 1 T C - ReadM SNP 0038.scaffold00149 188013 1 A C - ReadM SNP 0038.scaffold00149 188045 1 T C - ReadM SNP 0038.scaffold00149 188221 1 T A - ReadM INDEL 0038.scaffold00149 188322 1 C . - ReadM SNP 0038.scaffold00149 188379 1 A G - ReadM SNP 0038.scaffold00149 188419 1 A T - ReadM SNP 0038.scaffold00149 188581 1 A T - ReadM SNP 0038.scaffold00149 188678 1 T C - ReadM SNP 0038.scaffold00149 188720 1 A T - ReadM SNP 0038.scaffold00149 188771 1 C A - ReadM SNP 0038.scaffold00149 188933 1 A T - ReadM SNP 0038.scaffold00149 188991 1 G A - ReadM SNP 0038.scaffold00149 189033 1 G T - ReadM SNP 0038.scaffold00149 189086 1 G A - ReadM SNP 0038.scaffold00149 189092 1 A G - ReadM SNP 0038.scaffold00149 189347 1 T C - ReadM SNP 0038.scaffold00149 189421 1 G T - ReadM SNP 0038.scaffold00149 189847 1 T C - ReadM SNP 0038.scaffold00149 189909 1 C A - ReadM SNP 0038.scaffold00149 190211 1 T A - ReadM SNP 0038.scaffold00149 190448 1 A C - ReadM SNP 0038.scaffold00149 190536 1 T G - ReadM SNP 0038.scaffold00149 190551 1 T A - ReadM SNP 0038.scaffold00149 190648 1 A G - ReadM SNP 0038.scaffold00149 190656 1 T C - ReadM SNP 0038.scaffold00149 191079 1 A G - ReadM SNP 0038.scaffold00149 191090 1 A G - ReadM SNP 0038.scaffold00149 191144 1 T G - ReadM SNP 0038.scaffold00149 191328 1 A G - ReadM SNP 0038.scaffold00149 191333 1 T C - ReadM SNP 0038.scaffold00149 191431 1 A G - ReadM SNP 0038.scaffold00149 191557 1 T G - ReadM SNP 0038.scaffold00149 191564 1 A G - ReadM SNP 0038.scaffold00149 191609 1 T C - ReadM SNP 0038.scaffold00149 191614 1 G T - ReadM SNP 0038.scaffold00149 191713 1 C A - ReadM SNP 0038.scaffold00149 191725 1 T C - ReadM SNP 0038.scaffold00149 191764 1 A T - ReadM SNP 0038.scaffold00149 191828 1 T A - ReadM SNP 0038.scaffold00149 191958 1 A C - ReadM INDEL 0038.scaffold00149 192196 1 . A - ReadM SNP 0038.scaffold00149 192397 1 C T - ReadM SNP 0038.scaffold00149 192407 1 T C - ReadM SNP 0038.scaffold00149 192464 1 T A - ReadM SNP 0038.scaffold00149 192467 1 C T - ReadM SNP 0038.scaffold00149 192522 1 T G - ReadM SNP 0038.scaffold00149 192718 1 A G - ReadM SNP 0038.scaffold00149 192851 1 A G - ReadM SNP 0038.scaffold00149 192928 1 T C - ReadM SNP 0038.scaffold00149 192990 1 A G - ReadM SNP 0038.scaffold00149 193064 1 T C - Both SNP 0038.scaffold00149 193235 1 T G scaffold154 Both SNP 0038.scaffold00149 193237 1 T A scaffold154 Both SNP 0038.scaffold00149 193327 1 G A scaffold154 Both SNP 0038.scaffold00149 193373 1 G A scaffold154 Both SNP 0038.scaffold00149 193379 1 T C scaffold154 ScafM SNP 0038.scaffold00149 193394 1 T A scaffold154 Both SNP 0038.scaffold00149 193499 1 T C scaffold154 Both SNP 0038.scaffold00149 193501 1 A G scaffold154 Both SNP 0038.scaffold00149 193518 1 C T scaffold154 ScafM SNP 0038.scaffold00149 193580 1 C T scaffold154 ScafM SNP 0038.scaffold00149 193584 2 TT CC scaffold154 ScafM SNP 0038.scaffold00149 193597 1 C T scaffold154 ScafM SNP 0038.scaffold00149 193603 1 G T scaffold154 ScafM SNP 0038.scaffold00149 193607 1 A C scaffold154 ScafM SNP 0038.scaffold00149 193646 1 C A scaffold154 ScafM SNP 0038.scaffold00149 193655 1 T C scaffold154 ScafM SNP 0038.scaffold00149 193708 1 C G scaffold154 ScafM INDEL 0038.scaffold00149 193727 25 ......................... TTTCAGCCAATTCCCAGCCACTCCC scaffold154 ScafM SNP 0038.scaffold00149 193733 1 G C scaffold154 Both SNP 0038.scaffold00149 193802 1 T C scaffold154 ReadM SNP 0038.scaffold00149 193977 1 A C - ReadM SNP 0038.scaffold00149 194022 1 T C - ReadM SNP 0038.scaffold00149 194039 1 A T - ReadM SNP 0038.scaffold00149 194054 1 G A - ReadM SNP 0038.scaffold00149 194123 1 A T - ReadM SNP 0038.scaffold00149 194291 1 A G - ReadM SNP 0038.scaffold00149 194529 1 C T - ReadM SNP 0038.scaffold00149 194573 1 C T - ReadM SNP 0038.scaffold00149 194578 1 C T - ReadM SNP 0038.scaffold00149 194595 1 C A - ReadM SNP 0038.scaffold00149 194662 1 A G - ReadM SNP 0038.scaffold00149 194699 1 C T - ReadM SNP 0038.scaffold00149 194706 1 T G - ReadM SNP 0038.scaffold00149 194740 1 A G - ReadM SNP 0038.scaffold00149 194816 1 C A - ReadM SNP 0038.scaffold00149 194829 1 C T - ReadM SNP 0038.scaffold00149 194885 1 G A - ReadM SNP 0038.scaffold00149 194980 1 C T - ReadM SNP 0038.scaffold00149 195030 1 T C - ReadM SNP 0038.scaffold00149 195054 1 G A - Both SNP 0038.scaffold00149 195203 1 G A scaffold154 ScafM SNP 0038.scaffold00149 195209 1 C T scaffold154 ScafM SNP 0038.scaffold00149 195220 1 A G scaffold154 Both SNP 0038.scaffold00149 195248 1 G A scaffold154 Both SNP 0038.scaffold00149 195265 1 A G scaffold154 Both INDEL 0038.scaffold00149 195346 1 A . scaffold154 ScafM SNP 0038.scaffold00149 195350 1 A C scaffold154 Both SNP 0038.scaffold00149 195432 1 A C scaffold154 Both SNP 0038.scaffold00149 195462 1 T C scaffold154 ReadM SNP 0038.scaffold00149 195551 1 A T - ScafM SNP 0038.scaffold00149 195644 2 TT CC scaffold154 ReadM INDEL 0038.scaffold00149 196077 1 . C - ReadM SNP 0038.scaffold00149 196172 1 A G - ReadM INDEL 0038.scaffold00149 196188 1 T . - ReadM SNP 0038.scaffold00149 196239 1 A C - ReadM SNP 0038.scaffold00149 196473 1 C T - ReadM SNP 0038.scaffold00149 196483 1 G A - ReadM SNP 0038.scaffold00149 196615 1 A G - ReadM SNP 0038.scaffold00149 196674 1 C T - ReadM INDEL 0038.scaffold00149 196765 1 . A - ReadM SNP 0038.scaffold00149 196784 1 G A - ReadM SNP 0038.scaffold00149 196811 1 C T - ReadM SNP 0038.scaffold00149 196834 1 T C - ReadM SNP 0038.scaffold00149 196861 1 T C - ReadM SNP 0038.scaffold00149 196896 1 T C - ReadM SNP 0038.scaffold00149 196977 1 T A - ReadM SNP 0038.scaffold00149 197035 1 A G - Both SNP 0038.scaffold00149 197165 1 G T scaffold154 Both SNP 0038.scaffold00149 197243 1 G C scaffold154 Both SNP 0038.scaffold00149 197276 1 G A scaffold154 Both SNP 0038.scaffold00149 197350 1 A C scaffold154 Both SNP 0038.scaffold00149 197498 1 G C scaffold154 Both SNP 0038.scaffold00149 197506 1 A C scaffold154 Both SNP 0038.scaffold00149 197549 1 G A scaffold154 ScafM SNP 0038.scaffold00149 197648 1 G T scaffold154 Both SNP 0038.scaffold00149 197829 1 C T scaffold154 ScafM SNP 0038.scaffold00149 197853 2 AG GA scaffold154 Both SNP 0038.scaffold00149 197923 1 C T scaffold154 Both SNP 0038.scaffold00149 197957 1 A G scaffold154 Both SNP 0038.scaffold00149 197960 1 A G scaffold154 Both SNP 0038.scaffold00149 197995 1 A C scaffold154 Both SNP 0038.scaffold00149 198041 1 G A scaffold154 Both SNP 0038.scaffold00149 198104 1 C T scaffold154 ReadM SNP 0038.scaffold00149 198317 1 G T - ReadM SNP 0038.scaffold00149 198369 1 T G - ReadM SNP 0038.scaffold00149 198411 1 C T - ReadM SNP 0038.scaffold00149 198413 1 C T - ReadM SNP 0038.scaffold00149 198460 1 T C - ScafM INDEL 0038.scaffold00149 198659 1 . G scaffold154 ScafM SNP 0038.scaffold00149 198669 1 G A scaffold154 ScafM SNP 0038.scaffold00149 198677 1 C T scaffold154 ScafM SNP 0038.scaffold00149 198699 1 T C scaffold154 ScafM SNP 0038.scaffold00149 198703 1 T G scaffold154 ScafM SNP 0038.scaffold00149 198716 1 T C scaffold154 ScafM SNP 0038.scaffold00149 198743 1 C T scaffold154 ScafM INDEL 0038.scaffold00149 198750 4 .... TTAA scaffold154 ScafM SNP 0038.scaffold00149 198779 1 T C scaffold154 Both SNP 0038.scaffold00149 198819 1 A G scaffold154 Both SNP 0038.scaffold00149 198874 1 A G scaffold154 Both SNP 0038.scaffold00149 198878 1 G A scaffold154 Both SNP 0038.scaffold00149 198882 1 A G scaffold154 Both SNP 0038.scaffold00149 198992 1 T C scaffold154 Both INDEL 0038.scaffold00149 199005 1 C . scaffold154 ScafM SNP 0038.scaffold00149 199033 1 T C scaffold154 ScafM SNP 0038.scaffold00149 199035 1 T A scaffold154 Both SNP 0038.scaffold00149 199045 1 C T scaffold154 ReadM SNP 0038.scaffold00149 199119 1 A G - ReadM SNP 0038.scaffold00149 199143 1 T A - ReadM SNP 0038.scaffold00149 199199 1 C G - ReadM SNP 0038.scaffold00149 199242 1 T A - ReadM SNP 0038.scaffold00149 199347 1 T C - ReadM INDEL 0038.scaffold00149 199361 1 G . - ReadM SNP 0038.scaffold00149 199470 1 G T - ReadM SNP 0038.scaffold00149 199580 1 T A - ReadM SNP 0038.scaffold00149 199583 1 G T - ReadM INDEL 0038.scaffold00149 199634 1 . C - ReadM SNP 0038.scaffold00149 199669 1 C T - ReadM SNP 0038.scaffold00149 199681 1 G A - ReadM SNP 0038.scaffold00149 199747 1 A G - ReadM SNP 0038.scaffold00149 199757 1 T C - ReadM SNP 0038.scaffold00149 199854 1 A C - ReadM SNP 0038.scaffold00149 199922 1 A G - ReadM SNP 0038.scaffold00149 199927 1 C A - ReadM SNP 0038.scaffold00149 199994 1 T G - ReadM SNP 0038.scaffold00149 200109 1 G T - ReadM SNP 0038.scaffold00149 200156 1 C T - ReadM SNP 0038.scaffold00149 200159 1 A G - ReadM SNP 0038.scaffold00149 200201 1 T A - ReadM SNP 0038.scaffold00149 200231 1 G A - ReadM SNP 0038.scaffold00149 200294 1 A G - ReadM SNP 0038.scaffold00149 200299 1 G A - ScafM SNP 0038.scaffold00149 200348 1 A G scaffold154 ScafM SNP 0038.scaffold00149 200382 1 C G scaffold154 ScafM INDEL 0038.scaffold00149 200385 4 CTCC .... scaffold154 ScafM SNP 0038.scaffold00149 200424 1 T C scaffold154 ScafM SNP 0038.scaffold00149 200504 1 T C scaffold154 Both SNP 0038.scaffold00149 200518 1 T C scaffold154 ScafM SNP 0038.scaffold00149 200537 1 G T scaffold154 Both SNP 0038.scaffold00149 200587 1 C A scaffold154 ScafM SNP 0038.scaffold00149 200673 1 C T scaffold154 ScafM SNP 0038.scaffold00149 200702 1 G A scaffold154 ScafM SNP 0038.scaffold00149 204496 1 C A scaffold10755 ScafM SNP 0038.scaffold00149 204576 1 C T scaffold10755 ScafM SNP 0038.scaffold00149 204581 1 T C scaffold10755 ScafM SNP 0038.scaffold00149 204632 1 C T scaffold10755 ScafM SNP 0038.scaffold00149 204716 1 T A scaffold10755 ReadM SNP 0038.scaffold00149 206061 1 A T - ReadM SNP 0038.scaffold00149 207295 1 C T - ScafM SNP 0038.scaffold00149 210083 1 T C scaffold2126 ScafM SNP 0038.scaffold00149 210100 1 C A scaffold2126 ScafM SNP 0038.scaffold00149 210111 1 A G scaffold2126 ScafM SNP 0038.scaffold00149 210120 1 C T scaffold2126 ScafM SNP 0038.scaffold00149 210131 1 T C scaffold2126 ScafM SNP 0038.scaffold00149 210133 1 G T scaffold2126 ScafM SNP 0038.scaffold00149 210143 1 G A scaffold2126 ScafM SNP 0038.scaffold00149 210158 1 C T scaffold2126 ScafM SNP 0038.scaffold00149 210174 2 CA TG scaffold2126 ScafM SNP 0038.scaffold00149 210206 1 T C scaffold2126 ScafM SNP 0038.scaffold00149 210293 1 C T scaffold2126 ScafM SNP 0038.scaffold00149 211425 1 A G scaffold3758 ScafM SNP 0038.scaffold00149 211452 1 C T scaffold3758 ScafM SNP 0038.scaffold00149 211489 1 A G scaffold3758 ScafM INDEL 0038.scaffold00149 213836 3 ... TTT scaffold154 ScafM SNP 0038.scaffold00149 213867 1 A G scaffold154 ScafM SNP 0038.scaffold00149 213909 1 T A scaffold154 ScafM SNP 0038.scaffold00149 213960 1 T C scaffold154 ScafM SNP 0038.scaffold00149 213984 1 A T scaffold154 ScafM SNP 0038.scaffold00149 213988 1 C G scaffold154 ScafM SNP 0038.scaffold00149 214002 1 G A scaffold154 Both SNP 0038.scaffold00149 214213 1 T C scaffold154 Both SNP 0038.scaffold00149 214223 1 C G scaffold154 ScafM SNP 0038.scaffold00149 214301 1 C G scaffold154 ScafM SNP 0038.scaffold00149 214306 1 T C scaffold154 ScafM SNP 0038.scaffold00149 214354 1 C G scaffold154 ScafM SNP 0038.scaffold00149 214365 1 G C scaffold154 ScafM INDEL 0038.scaffold00149 214384 16 ................ AGTGATTATGAGGGAA scaffold154 ScafM INDEL 0038.scaffold00149 214387 4 .... TTAC scaffold154 ScafM SNP 0038.scaffold00149 214411 1 A T scaffold154 ScafM SNP 0038.scaffold00149 214423 2 CC AA scaffold154 ScafM SNP 0038.scaffold00149 214455 1 A C scaffold154 ScafM SNP 0038.scaffold00149 214460 1 A G scaffold154 Both SNP 0038.scaffold00149 214491 1 C A scaffold154 Both SNP 0038.scaffold00149 214500 1 C T scaffold154 Both SNP 0038.scaffold00149 214564 1 T G scaffold154 Both SNP 0038.scaffold00149 214656 1 T C scaffold154 Both SNP 0038.scaffold00149 214683 1 C T scaffold154 Both SNP 0038.scaffold00149 214709 1 G C scaffold154 Both SNP 0038.scaffold00149 214824 1 C G scaffold154 Both SNP 0038.scaffold00149 214829 1 A G scaffold154 Both SNP 0038.scaffold00149 214947 1 G T scaffold154 Both SNP 0038.scaffold00149 214963 1 G T scaffold154 Both SNP 0038.scaffold00149 214977 1 T C scaffold154 ScafM SNP 0038.scaffold00149 215079 2 TA CG scaffold154 Both SNP 0038.scaffold00149 215118 1 T C scaffold154 ScafM SNP 0038.scaffold00149 215153 1 T C scaffold154 Both SNP 0038.scaffold00149 215292 1 C A scaffold154 Both SNP 0038.scaffold00149 215295 1 G C scaffold154 ScafM SNP 0038.scaffold00149 215323 2 TT AA scaffold154 ScafM SNP 0038.scaffold00149 215351 1 T C scaffold154 ScafM SNP 0038.scaffold00149 215361 1 T A scaffold154 Both SNP 0038.scaffold00149 215462 1 G A scaffold154 Both SNP 0038.scaffold00149 215498 1 G T scaffold154 Both SNP 0038.scaffold00149 215602 1 A G scaffold154 Both SNP 0038.scaffold00149 215669 1 A G scaffold154 Both SNP 0038.scaffold00149 215731 1 C T scaffold154 Both SNP 0038.scaffold00149 215760 1 C A scaffold154 Both INDEL 0038.scaffold00149 215762 1 C . scaffold154 Both SNP 0038.scaffold00149 215807 1 T C scaffold154 Both SNP 0038.scaffold00149 215852 1 T C scaffold154 ReadM SNP 0038.scaffold00149 215887 1 A T - ReadM INDEL 0038.scaffold00149 215923 1 . T - ReadM SNP 0038.scaffold00149 215965 1 T C - ReadM INDEL 0038.scaffold00149 215988 1 . A - ScafM SNP 0038.scaffold00149 216165 1 G A scaffold154 ScafM SNP 0038.scaffold00149 216187 1 A T scaffold154 ScafM SNP 0038.scaffold00149 216200 1 T A scaffold154 ScafM SNP 0038.scaffold00149 216217 1 T A scaffold154 ScafM SNP 0038.scaffold00149 216244 1 C T scaffold154 Both SNP 0038.scaffold00149 216404 1 G T scaffold154 ScafM SNP 0038.scaffold00149 216473 1 A T scaffold154 ScafM SNP 0038.scaffold00149 216476 1 G C scaffold154 ScafM SNP 0038.scaffold00149 216479 1 T C scaffold154 ReadM SNP 0038.scaffold00149 216804 1 C T - ReadM SNP 0038.scaffold00149 216920 1 C T - ReadM SNP 0038.scaffold00149 216983 1 A G - ReadM SNP 0038.scaffold00149 217046 1 A G - ReadM SNP 0038.scaffold00149 217111 1 T A - ReadM SNP 0038.scaffold00149 217135 1 C G - ReadM SNP 0038.scaffold00149 217591 1 T C - ReadM SNP 0038.scaffold00149 217623 1 C A - ReadM SNP 0038.scaffold00149 217691 1 T A - ReadM SNP 0038.scaffold00149 218059 1 T C - ReadM SNP 0038.scaffold00149 218064 1 G T - ReadM SNP 0038.scaffold00149 218093 1 T A - ReadM SNP 0038.scaffold00149 218182 1 A T - ReadM SNP 0038.scaffold00149 218233 1 G T - ReadM SNP 0038.scaffold00149 218266 1 A T - ReadM SNP 0038.scaffold00149 218425 1 T A - ScafM SNP 0038.scaffold00149 219208 1 T C scaffold4662 ScafM SNP 0038.scaffold00149 219220 1 G C scaffold4662 ScafM INDEL 0038.scaffold00149 219223 2 .A GC scaffold4662 ScafM SNP 0038.scaffold00149 219226 1 T G scaffold4662 ScafM SNP 0038.scaffold00149 219239 2 GA TG scaffold4662 ScafM SNP 0038.scaffold00149 219242 1 A C scaffold4662 ScafM SNP 0038.scaffold00149 219245 1 G A scaffold4662 ScafM SNP 0038.scaffold00149 219252 1 G A scaffold4662 ScafM SNP 0038.scaffold00149 219255 1 T C scaffold4662 ScafM SNP 0038.scaffold00149 219264 1 T C scaffold4662 ScafM SNP 0038.scaffold00149 219266 1 A T scaffold4662 ScafM SNP 0038.scaffold00149 219268 1 G T scaffold4662 ScafM SNP 0038.scaffold00149 219273 1 A G scaffold4662 ScafM SNP 0038.scaffold00149 219296 1 C G scaffold4662 ScafM SNP 0038.scaffold00149 219301 2 GA AT scaffold4662 ScafM SNP 0038.scaffold00149 219304 1 A G scaffold4662 ScafM SNP 0038.scaffold00149 219308 1 C T scaffold4662 ScafM SNP 0038.scaffold00149 219310 2 GT AG scaffold4662 ScafM SNP 0038.scaffold00149 219315 1 G A scaffold4662 ScafM SNP 0038.scaffold00149 219318 1 A G scaffold4662 ScafM SNP 0038.scaffold00149 219320 1 G T scaffold4662 ScafM SNP 0038.scaffold00149 219322 2 CG TT scaffold4662 ScafM SNP 0038.scaffold00149 219328 1 T A scaffold4662 ScafM SNP 0038.scaffold00149 219335 1 T G scaffold4662 ScafM SNP 0038.scaffold00149 219338 1 A G scaffold4662 ScafM SNP 0038.scaffold00149 219347 1 T G scaffold4662 ScafM SNP 0038.scaffold00149 219351 1 G A scaffold4662 ScafM SNP 0038.scaffold00149 219365 1 C G scaffold4662 ScafM SNP 0038.scaffold00149 219376 1 C T scaffold4662 ScafM SNP 0038.scaffold00149 219384 1 C A scaffold4662 ScafM SNP 0038.scaffold00149 219388 1 T C scaffold4662 ScafM SNP 0038.scaffold00149 219390 1 C T scaffold4662 ScafM SNP 0038.scaffold00149 219393 1 T G scaffold4662 ScafM INDEL 0038.scaffold00149 219403 2 CC .. scaffold4662 ScafM INDEL 0038.scaffold00149 219406 1 C . scaffold4662 ScafM SNP 0038.scaffold00149 219419 1 A C scaffold4662 ScafM SNP 0038.scaffold00149 219421 1 T C scaffold4662 ScafM INDEL 0038.scaffold00149 219425 1 A . scaffold4662 ScafM INDEL 0038.scaffold00149 219427 2 .. AA scaffold4662 ScafM SNP 0038.scaffold00149 219429 1 C G scaffold4662 ScafM SNP 0038.scaffold00149 219431 1 T C scaffold4662 ScafM SNP 0038.scaffold00149 219439 1 A G scaffold4662 ScafM SNP 0038.scaffold00149 219452 1 C T scaffold4662 ScafM SNP 0038.scaffold00149 219454 1 A C scaffold4662 ScafM SNP 0038.scaffold00149 219459 1 C A scaffold4662 ScafM SNP 0038.scaffold00149 219471 1 A T scaffold4662 ScafM INDEL 0038.scaffold00149 219487 1 C . scaffold4662 ScafM SNP 0038.scaffold00149 219495 1 A T scaffold4662 ScafM SNP 0038.scaffold00149 219498 1 T G scaffold4662 ScafM SNP 0038.scaffold00149 219504 1 G C scaffold4662 ScafM SNP 0038.scaffold00149 219514 1 T A scaffold4662 ScafM INDEL 0038.scaffold00149 219515 3 ..A CTC scaffold4662 ScafM SNP 0038.scaffold00149 219521 1 G A scaffold4662 ReadM SNP 0038.scaffold00149 228066 1 G T - ReadM SNP 0038.scaffold00149 228131 1 A G - ReadM SNP 0038.scaffold00149 228179 1 A C - ReadM SNP 0038.scaffold00149 228184 1 G A - ReadM SNP 0038.scaffold00149 228274 1 A G - ReadM SNP 0038.scaffold00149 228285 1 T C - ReadM SNP 0038.scaffold00149 228374 1 T A - ReadM SNP 0038.scaffold00149 228385 1 C T - ReadM SNP 0038.scaffold00149 228527 1 A G - ReadM SNP 0038.scaffold00149 228556 1 T C - ReadM SNP 0038.scaffold00149 228609 1 C T - ReadM SNP 0038.scaffold00149 228611 1 G A - ReadM SNP 0038.scaffold00149 228640 1 T C - ReadM SNP 0038.scaffold00149 228727 1 C G - ReadM SNP 0038.scaffold00149 229425 1 G T - ReadM SNP 0038.scaffold00149 229509 1 A G - ReadM SNP 0038.scaffold00149 229536 1 A G - ReadM SNP 0038.scaffold00149 229649 1 T C - ReadM SNP 0038.scaffold00149 229662 1 G A - ReadM SNP 0038.scaffold00149 229770 1 C A - ReadM SNP 0038.scaffold00149 229775 1 T C - ReadM SNP 0038.scaffold00149 229844 1 T G - ReadM SNP 0038.scaffold00149 229861 1 A C - ReadM SNP 0038.scaffold00149 229882 1 C G - ReadM SNP 0038.scaffold00149 229961 1 C G - ReadM SNP 0038.scaffold00149 230122 1 A G - ReadM SNP 0038.scaffold00149 230176 1 A T - ReadM SNP 0038.scaffold00149 230243 1 T C - ReadM SNP 0038.scaffold00149 230248 1 T G - ReadM SNP 0038.scaffold00149 230316 1 A G - ReadM SNP 0038.scaffold00149 230340 1 G A - ReadM SNP 0038.scaffold00149 230473 1 T C - ReadM SNP 0038.scaffold00149 230529 1 C G - ReadM SNP 0038.scaffold00149 230744 1 G A - ReadM SNP 0038.scaffold00149 230776 1 G A - ReadM SNP 0038.scaffold00149 230793 1 T C - ReadM SNP 0038.scaffold00149 230840 1 G A - ReadM SNP 0038.scaffold00149 230918 1 A T - ReadM SNP 0038.scaffold00149 230958 1 C T - ReadM SNP 0038.scaffold00149 231005 1 C G - ReadM SNP 0038.scaffold00149 231105 1 G A - ReadM SNP 0038.scaffold00149 231109 1 C T - ReadM SNP 0038.scaffold00149 234927 1 A C - ScafM SNP 0038.scaffold00149 237898 1 T A scaffold4101 ScafM SNP 0038.scaffold00149 237913 1 A C scaffold4101 ScafM INDEL 0038.scaffold00149 237944 2 AA .T scaffold4101 ScafM SNP 0038.scaffold00149 237948 2 CC GT scaffold4101 ScafM SNP 0038.scaffold00149 237951 6 CGCACC ATGTTA scaffold4101 ScafM SNP 0038.scaffold00149 237958 1 C A scaffold4101 ScafM SNP 0038.scaffold00149 237960 3 AAC TTG scaffold4101 ScafM SNP 0038.scaffold00149 237964 1 A G scaffold4101 ScafM INDEL 0038.scaffold00149 237965 2 .A CG scaffold4101 ScafM INDEL 0038.scaffold00149 237969 2 .C GG scaffold4101 ScafM SNP 0038.scaffold00149 237972 1 T G scaffold4101 ScafM SNP 0038.scaffold00149 237976 4 AAAG CCGA scaffold4101 ScafM SNP 0038.scaffold00149 238050 1 C T scaffold4101 ScafM SNP 0038.scaffold00149 239367 1 A G scaffold154 ScafM SNP 0038.scaffold00149 239508 1 G A scaffold154 ScafM SNP 0038.scaffold00149 239516 1 G A scaffold154 ScafM SNP 0038.scaffold00149 239582 1 G T scaffold154 ScafM SNP 0038.scaffold00149 239625 1 G C scaffold154 ScafM SNP 0038.scaffold00149 239654 1 A T scaffold154 ScafM INDEL 0038.scaffold00149 239664 1 T . scaffold154 ScafM SNP 0038.scaffold00149 239673 1 C A scaffold154 ScafM SNP 0038.scaffold00149 239685 1 G A scaffold154 ScafM SNP 0038.scaffold00149 239730 1 A C scaffold154 ScafM SNP 0038.scaffold00149 239747 1 T C scaffold154 ScafM SNP 0038.scaffold00149 239754 1 A G scaffold154 Both SNP 0038.scaffold00149 239790 1 T C scaffold154 Both SNP 0038.scaffold00149 239830 1 A G scaffold154 ScafM SNP 0038.scaffold00149 239857 1 T C scaffold154 ScafM SNP 0038.scaffold00149 239875 1 G A scaffold154 ScafM SNP 0038.scaffold00149 239879 1 T G scaffold154 ScafM SNP 0038.scaffold00149 239881 1 C T scaffold154 ScafM SNP 0038.scaffold00149 239921 1 T C scaffold154 ScafM SNP 0038.scaffold00149 239931 1 C A scaffold154 ScafM SNP 0038.scaffold00149 239979 2 TA CT scaffold154 ReadM SNP 0038.scaffold00149 240087 1 G A - ReadM SNP 0038.scaffold00149 240095 1 G T - Both SNP 0038.scaffold00149 240215 1 G A scaffold154 Both SNP 0038.scaffold00149 240228 1 G A scaffold154 ReadM INDEL 0038.scaffold00149 240312 2 TA .. - ReadM SNP 0038.scaffold00149 240497 1 A G - ReadM SNP 0038.scaffold00149 240544 1 C A - Both SNP 0038.scaffold00149 240576 1 C T scaffold154 Both SNP 0038.scaffold00149 240593 1 G A scaffold154 ScafM SNP 0038.scaffold00149 240620 1 G C scaffold154 ScafM SNP 0038.scaffold00149 240629 1 T A scaffold154 ScafM SNP 0038.scaffold00149 240633 1 G A scaffold154 ScafM SNP 0038.scaffold00149 240671 1 A T scaffold154 ScafM SNP 0038.scaffold00149 240741 1 G T scaffold154 ScafM SNP 0038.scaffold00149 240751 1 T C scaffold154 ScafM SNP 0038.scaffold00149 240753 1 A T scaffold154 ScafM SNP 0038.scaffold00149 240776 1 A G scaffold154 ScafM SNP 0038.scaffold00149 240789 1 G A scaffold154 ScafM SNP 0038.scaffold00149 240796 1 C T scaffold154 ScafM SNP 0038.scaffold00149 240854 1 G T scaffold154 ScafM SNP 0038.scaffold00149 240910 1 C A scaffold154 ScafM INDEL 0038.scaffold00149 240929 2 .A TT scaffold154 ScafM SNP 0038.scaffold00149 240942 1 A T scaffold154 ScafM INDEL 0038.scaffold00149 240991 40 ........................................ TGATTTATTAGTTTCTATGTTAAAAATGGATTTTGAAAAA scaffold154 ScafM SNP 0038.scaffold00149 240999 1 C T scaffold154 ScafM SNP 0038.scaffold00149 241018 1 C T scaffold154 ScafM SNP 0038.scaffold00149 241021 1 C T scaffold154 Both SNP 0038.scaffold00149 241054 1 C T scaffold154 ScafM SNP 0038.scaffold00149 241117 1 T G scaffold154 ScafM SNP 0038.scaffold00149 241127 1 G T scaffold154 ScafM SNP 0038.scaffold00149 241165 1 C T scaffold154 ScafM SNP 0038.scaffold00149 241168 1 T C scaffold154 ScafM SNP 0038.scaffold00149 241187 1 G A scaffold154 ReadM SNP 0038.scaffold00149 241355 1 A T - ReadM SNP 0038.scaffold00149 241416 1 C T - ScafM SNP 0038.scaffold00149 241516 1 C T scaffold154 Both SNP 0038.scaffold00149 241587 1 A C scaffold154 Both SNP 0038.scaffold00149 241616 1 G A scaffold154 ScafM SNP 0038.scaffold00149 241621 1 T C scaffold154 ScafM SNP 0038.scaffold00149 241664 1 C T scaffold154 ScafM SNP 0038.scaffold00149 241666 1 G A scaffold154 ScafM SNP 0038.scaffold00149 241691 1 C A scaffold154 ReadM SNP 0038.scaffold00149 241966 1 A T - ReadM SNP 0038.scaffold00149 241981 1 C T - ReadM SNP 0038.scaffold00149 242007 1 G A - ScafM SNP 0038.scaffold00149 242818 1 C G scaffold154 ScafM SNP 0038.scaffold00149 242865 1 A T scaffold154 ScafM SNP 0038.scaffold00149 242894 1 G A scaffold154 ScafM SNP 0038.scaffold00149 242904 1 C G scaffold154 ScafM SNP 0038.scaffold00149 243019 1 T C scaffold154 ScafM SNP 0038.scaffold00149 243028 1 A T scaffold154 ScafM SNP 0038.scaffold00149 243040 2 CA TG scaffold154 ScafM SNP 0038.scaffold00149 243049 1 G A scaffold154 ScafM SNP 0038.scaffold00149 243081 1 A C scaffold154 ScafM SNP 0038.scaffold00149 243118 1 C G scaffold154 ReadM SNP 0038.scaffold00149 247159 1 T G - ReadM SNP 0038.scaffold00149 247263 1 T C - ReadM SNP 0038.scaffold00149 247605 1 G A - ReadM SNP 0038.scaffold00149 247639 1 G A - ReadM SNP 0038.scaffold00149 247688 1 A C - ReadM SNP 0038.scaffold00149 247720 1 A G - ReadM SNP 0038.scaffold00149 247749 1 G A - ScafM SNP 0038.scaffold00149 247896 1 T C scaffold154 ScafM SNP 0038.scaffold00149 247901 1 T G scaffold154 ScafM SNP 0038.scaffold00149 247943 1 C A scaffold154 ScafM INDEL 0038.scaffold00149 247956 2 .G AA scaffold154 ScafM SNP 0038.scaffold00149 248022 1 G C scaffold154 Both SNP 0038.scaffold00149 248039 1 A T scaffold154 Both SNP 0038.scaffold00149 248053 1 A G scaffold154 ReadM SNP 0038.scaffold00149 248076 1 A G - ReadM SNP 0038.scaffold00149 248137 1 T C - Both SNP 0038.scaffold00149 248209 1 C A scaffold154 Both SNP 0038.scaffold00149 248213 1 G C scaffold154 ScafM SNP 0038.scaffold00149 248228 1 G A scaffold154 ScafM SNP 0038.scaffold00149 248243 1 A G scaffold154 ScafM SNP 0038.scaffold00149 248245 1 C T scaffold154 ScafM SNP 0038.scaffold00149 248289 1 T C scaffold154 ScafM SNP 0038.scaffold00149 248297 1 C G scaffold154 ScafM SNP 0038.scaffold00149 248322 1 C T scaffold154 ScafM SNP 0038.scaffold00149 248324 1 A G scaffold154 ScafM SNP 0038.scaffold00149 248329 1 T C scaffold154 ScafM SNP 0038.scaffold00149 248361 1 C T scaffold154 Both SNP 0038.scaffold00149 248408 1 A G scaffold154 Both SNP 0038.scaffold00149 248413 1 G A scaffold154 ScafM SNP 0038.scaffold00149 248442 1 A G scaffold154 ScafM SNP 0038.scaffold00149 248466 1 A G scaffold154 Both SNP 0038.scaffold00149 248500 1 G A scaffold154 ScafM SNP 0038.scaffold00149 248510 1 G T scaffold154 ScafM SNP 0038.scaffold00149 248512 1 A G scaffold154 ScafM SNP 0038.scaffold00149 248598 1 T C scaffold154 ScafM SNP 0038.scaffold00149 248605 1 C A scaffold154 ScafM SNP 0038.scaffold00149 261099 2 TT CC scaffold154 ScafM SNP 0038.scaffold00149 261111 1 A G scaffold154 ScafM SNP 0038.scaffold00149 261133 1 T G scaffold154 ScafM SNP 0038.scaffold00149 261159 1 T C scaffold154 ScafM SNP 0038.scaffold00149 261164 1 T C scaffold154 ScafM SNP 0038.scaffold00149 261176 1 C T scaffold154 ReadM SNP 0038.scaffold00149 262003 1 T G - ReadM SNP 0038.scaffold00149 262037 1 A C - ReadM SNP 0038.scaffold00149 262074 1 C A - ReadM SNP 0038.scaffold00149 262136 1 T C - ReadM SNP 0038.scaffold00149 262151 1 C T - Both SNP 0038.scaffold00149 262189 1 A G scaffold154 Both SNP 0038.scaffold00149 262203 1 G C scaffold154 ScafM SNP 0038.scaffold00149 262262 1 T C scaffold154 ScafM SNP 0038.scaffold00149 262268 1 C A scaffold154 ScafM SNP 0038.scaffold00149 262284 1 G A scaffold154 ScafM SNP 0038.scaffold00149 262290 1 G A scaffold154 ScafM INDEL 0038.scaffold00149 262325 30 .............................. CGCAAGGTAAGCCGTTCAGAAGTAGCCCCA scaffold154 ScafM INDEL 0038.scaffold00149 262328 2 .. CA scaffold154 ScafM SNP 0038.scaffold00149 262360 1 A T scaffold154 ScafM SNP 0038.scaffold00149 262379 1 A T scaffold154 ScafM SNP 0038.scaffold00149 262388 1 A C scaffold154 ScafM SNP 0038.scaffold00149 262394 1 G C scaffold154 ScafM INDEL 0038.scaffold00149 262396 1 . C scaffold154 ScafM INDEL 0038.scaffold00149 262448 1 G . scaffold154 ScafM SNP 0038.scaffold00149 262479 1 C G scaffold154 ScafM SNP 0038.scaffold00149 262553 1 C T scaffold154 ScafM SNP 0038.scaffold00149 262556 1 G A scaffold154 ScafM SNP 0038.scaffold00149 262564 1 T C scaffold154 ScafM SNP 0038.scaffold00149 262595 1 A T scaffold154 ScafM SNP 0038.scaffold00149 262612 2 AA CG scaffold154 ScafM SNP 0038.scaffold00149 262637 1 C A scaffold154 ScafM SNP 0038.scaffold00149 262705 1 T A scaffold154 ScafM SNP 0038.scaffold00149 262724 1 C T scaffold154 ScafM SNP 0038.scaffold00149 262731 1 T A scaffold154 ScafM SNP 0038.scaffold00149 262766 1 A T scaffold154 ScafM SNP 0038.scaffold00149 262774 1 A G scaffold154 ScafM SNP 0038.scaffold00149 263395 1 T C scaffold154 ReadM SNP 0038.scaffold00149 263581 1 A T - ScafM SNP 0038.scaffold00149 263742 1 T G scaffold154 ScafM SNP 0038.scaffold00149 263751 1 C T scaffold154 ScafM SNP 0038.scaffold00149 263753 1 T A scaffold154 ScafM SNP 0038.scaffold00149 263760 1 T C scaffold154 ScafM SNP 0038.scaffold00149 263782 1 T G scaffold154 ScafM SNP 0038.scaffold00149 263828 1 T A scaffold154 ScafM INDEL 0038.scaffold00149 263830 4 .... ATAC scaffold154 ScafM SNP 0038.scaffold00149 263849 1 A C scaffold154 ScafM SNP 0038.scaffold00149 263870 1 G A scaffold154 ScafM SNP 0038.scaffold00149 263892 1 G A scaffold154 ScafM SNP 0038.scaffold00149 263904 1 C T scaffold154 ScafM SNP 0038.scaffold00149 264905 2 AG CT scaffold11 ScafM SNP 0038.scaffold00149 264911 1 G A scaffold11 Both SNP 0038.scaffold00149 265033 1 G A scaffold11 Both SNP 0038.scaffold00149 265040 1 G A scaffold11 ScafM SNP 0038.scaffold00149 265078 1 T C scaffold11 ScafM SNP 0038.scaffold00149 265099 1 T C scaffold11 ScafM SNP 0038.scaffold00149 265103 1 C A scaffold11 Both SNP 0038.scaffold00149 265134 1 A C scaffold11 ScafM SNP 0038.scaffold00149 265216 1 A T scaffold11 ScafM INDEL 0038.scaffold00149 265250 14 .............. CAAGTCTCAAGTCT scaffold11 ReadM SNP 0038.scaffold00149 296498 1 A G - ReadM SNP 0038.scaffold00149 296611 1 G T - ReadM SNP 0038.scaffold00149 298460 1 C G - ReadM SNP 0038.scaffold00149 298465 1 A G - ReadM INDEL 0038.scaffold00149 298512 1 C . - ReadM SNP 0038.scaffold00149 298694 1 C G - ReadM SNP 0038.scaffold00149 298905 1 A G - ReadM SNP 0038.scaffold00149 298942 1 G T - ReadM SNP 0038.scaffold00149 298979 1 A G - ReadM SNP 0038.scaffold00149 299007 1 C T - ReadM SNP 0038.scaffold00149 299041 1 T C - ReadM SNP 0038.scaffold00149 299045 1 A T - ScafM SNP 0038.scaffold00149 311357 1 G C scaffold11 ScafM SNP 0038.scaffold00149 311542 1 C T scaffold11 ScafM SNP 0038.scaffold00149 311551 1 G A scaffold11 ScafM SNP 0038.scaffold00149 311672 1 G T scaffold11 ScafM SNP 0038.scaffold00149 311685 1 G C scaffold11 ReadM SNP 0038.scaffold00149 311878 1 A C - ReadM SNP 0038.scaffold00149 311881 1 C T - ReadM SNP 0038.scaffold00149 311959 1 C T - ReadM SNP 0038.scaffold00149 312188 1 G T - ReadM SNP 0038.scaffold00149 312192 1 C A - ReadM SNP 0038.scaffold00149 312346 1 G A - ReadM INDEL 0038.scaffold00149 312424 1 G . - ReadM SNP 0038.scaffold00149 312631 1 A T - Both SNP 0038.scaffold00149 312675 1 A T scaffold11 Both SNP 0038.scaffold00149 312769 1 C T scaffold11 Both SNP 0038.scaffold00149 312771 1 A G scaffold11 Both SNP 0038.scaffold00149 312784 1 T G scaffold11 Both SNP 0038.scaffold00149 312828 1 G A scaffold11 Both SNP 0038.scaffold00149 312879 1 C A scaffold11 ReadM SNP 0038.scaffold00149 312905 1 T A - ReadM SNP 0038.scaffold00149 312965 1 A G - ReadM SNP 0038.scaffold00149 313006 1 C A - ScafM SNP 0038.scaffold00149 313025 1 T C scaffold11 ScafM SNP 0038.scaffold00149 313047 1 G C scaffold11 ScafM SNP 0038.scaffold00149 313059 1 C T scaffold11 Both SNP 0038.scaffold00149 313094 1 G A scaffold11 ReadM SNP 0038.scaffold00149 313149 1 T A - ReadM SNP 0038.scaffold00149 313186 1 A G - ReadM SNP 0038.scaffold00149 313226 1 G C - ReadM SNP 0038.scaffold00149 313246 1 T G - ReadM INDEL 0038.scaffold00149 313282 1 . A - ReadM SNP 0038.scaffold00149 313338 1 A T - ReadM SNP 0038.scaffold00149 313651 1 G A - ReadM SNP 0038.scaffold00149 313666 1 A G - ReadM SNP 0038.scaffold00149 313683 1 A G - ReadM SNP 0038.scaffold00149 313764 1 C A - ReadM SNP 0038.scaffold00149 313781 1 C A - ScafM SNP 0038.scaffold00149 313900 1 C A scaffold11 ScafM SNP 0038.scaffold00149 313919 1 A G scaffold11 ScafM SNP 0038.scaffold00149 313961 1 C G scaffold11 ScafM SNP 0038.scaffold00149 313965 1 G A scaffold11 ScafM SNP 0038.scaffold00149 313983 2 GG AA scaffold11 ScafM SNP 0038.scaffold00149 313998 1 G C scaffold11 ScafM SNP 0038.scaffold00149 314043 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 314046 1 . C scaffold11 ScafM SNP 0038.scaffold00149 314065 1 A G scaffold11 ScafM SNP 0038.scaffold00149 314102 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 314109 7 ....... ATTGAAA scaffold11 ScafM INDEL 0038.scaffold00149 314114 9 ......... GGAAATGAT scaffold11 ScafM SNP 0038.scaffold00149 314116 5 CCCCC AGGGG scaffold11 ScafM SNP 0038.scaffold00149 314127 2 TT CC scaffold11 ScafM SNP 0038.scaffold00149 314131 1 T C scaffold11 ScafM SNP 0038.scaffold00149 314142 1 A T scaffold11 ScafM INDEL 0038.scaffold00149 314164 4 .... TCTA scaffold11 ScafM SNP 0038.scaffold00149 314204 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 314274 2 CA .. scaffold11 ScafM SNP 0038.scaffold00149 314277 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 314293 1 . T scaffold11 Both SNP 0038.scaffold00149 314461 1 G A scaffold11 ReadM SNP 0038.scaffold00149 314560 1 A T - ReadM SNP 0038.scaffold00149 314566 1 T C - ReadM SNP 0038.scaffold00149 314908 1 G T - Both SNP 0038.scaffold00149 314932 1 T C scaffold11 Both SNP 0038.scaffold00149 314977 1 T C scaffold11 ScafM SNP 0038.scaffold00149 315051 1 G T scaffold11 ScafM SNP 0038.scaffold00149 315062 2 AC GG scaffold11 ScafM SNP 0038.scaffold00149 315069 1 G T scaffold11 ScafM SNP 0038.scaffold00149 315074 1 C T scaffold11 ScafM SNP 0038.scaffold00149 315078 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315092 1 T C scaffold11 ScafM SNP 0038.scaffold00149 315152 1 T C scaffold11 ScafM SNP 0038.scaffold00149 315172 2 TA AG scaffold11 ScafM SNP 0038.scaffold00149 315211 2 CT TG scaffold11 ScafM SNP 0038.scaffold00149 315223 1 G A scaffold11 ScafM SNP 0038.scaffold00149 315228 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 315235 2 .T CA scaffold11 ScafM SNP 0038.scaffold00149 315264 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 315272 3 ... CCC scaffold11 ScafM SNP 0038.scaffold00149 315283 1 T C scaffold11 ScafM SNP 0038.scaffold00149 315286 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315288 1 C T scaffold11 ScafM SNP 0038.scaffold00149 315294 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315296 1 G A scaffold11 ScafM SNP 0038.scaffold00149 315304 1 A C scaffold11 ScafM SNP 0038.scaffold00149 315323 1 G A scaffold11 ScafM SNP 0038.scaffold00149 315325 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315355 1 G A scaffold11 ScafM SNP 0038.scaffold00149 315371 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315634 1 G C scaffold11 ScafM SNP 0038.scaffold00149 315699 1 A G scaffold11 ScafM SNP 0038.scaffold00149 315703 1 A G scaffold11 ReadM INDEL 0038.scaffold00149 315729 2 .. AT - ReadM SNP 0038.scaffold00149 315774 1 T C - ReadM SNP 0038.scaffold00149 315839 1 C T - ReadM SNP 0038.scaffold00149 315862 1 T G - ScafM SNP 0038.scaffold00149 316139 1 A C scaffold11 ScafM SNP 0038.scaffold00149 316141 1 G A scaffold11 ScafM SNP 0038.scaffold00149 316154 1 C T scaffold11 ScafM SNP 0038.scaffold00149 316204 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 316227 4 .... AAAT scaffold11 ScafM SNP 0038.scaffold00149 316239 1 T C scaffold11 ReadM SNP 0038.scaffold00149 317320 1 G A - ReadM SNP 0038.scaffold00149 317444 1 G A - ReadM SNP 0038.scaffold00149 317555 1 C G - ReadM SNP 0038.scaffold00149 317574 1 T C - ReadM SNP 0038.scaffold00149 317625 1 C T - ReadM SNP 0038.scaffold00149 318052 1 G T - ReadM SNP 0038.scaffold00149 318078 1 A G - ReadM SNP 0038.scaffold00149 318099 1 C T - ReadM SNP 0038.scaffold00149 318812 1 T C - ReadM SNP 0038.scaffold00149 319351 1 G A - ScafM SNP 0038.scaffold00149 337399 2 TT CC scaffold1838 ScafM SNP 0038.scaffold00149 337416 1 A G scaffold1838 ScafM SNP 0038.scaffold00149 337423 1 T C scaffold1838 ScafM SNP 0038.scaffold00149 337510 1 T C scaffold1838 ScafM SNP 0038.scaffold00149 337558 1 C T scaffold1838 ScafM SNP 0038.scaffold00149 337571 1 G A scaffold1838 ScafM SNP 0038.scaffold00149 340937 1 G A scaffold367 ScafM SNP 0038.scaffold00149 341009 1 T C scaffold367 ScafM SNP 0038.scaffold00149 341018 1 A T scaffold367 ReadM SNP 0038.scaffold00149 347902 1 C A - ReadM SNP 0038.scaffold00149 347943 1 G T - ReadM SNP 0038.scaffold00149 347990 1 A G - ReadM SNP 0038.scaffold00149 347993 1 G A - ReadM SNP 0038.scaffold00149 348008 1 T C - ReadM SNP 0038.scaffold00149 348067 1 G A - ReadM SNP 0038.scaffold00149 348091 1 A G - ReadM SNP 0038.scaffold00149 348224 1 C T - ReadM SNP 0038.scaffold00149 348252 1 A C - ReadM SNP 0038.scaffold00149 348340 1 G T - ReadM SNP 0038.scaffold00149 348698 1 C T - ReadM SNP 0038.scaffold00149 348705 1 G A - ReadM SNP 0038.scaffold00149 348741 1 C T - ReadM SNP 0038.scaffold00149 348816 1 A G - ReadM SNP 0038.scaffold00149 348836 1 T C - ReadM SNP 0038.scaffold00149 348948 1 C T - ReadM SNP 0038.scaffold00149 348973 1 C T - ReadM SNP 0038.scaffold00149 348996 1 A G - ReadM SNP 0038.scaffold00149 354774 1 C T - ReadM SNP 0038.scaffold00149 354825 1 A G - ReadM SNP 0038.scaffold00149 354897 1 C T - ReadM SNP 0038.scaffold00149 355046 1 C T - ReadM SNP 0038.scaffold00149 355077 1 G T - ReadM SNP 0038.scaffold00149 355102 1 T C - ReadM SNP 0038.scaffold00149 355128 1 T G - ReadM SNP 0038.scaffold00149 355161 1 C T - ReadM SNP 0038.scaffold00149 355442 1 G A - ReadM SNP 0038.scaffold00149 355508 1 A G - ScafM SNP 0038.scaffold00149 355556 1 T C scaffold11 ScafM SNP 0038.scaffold00149 355566 1 C T scaffold11 ScafM SNP 0038.scaffold00149 355576 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 355601 1 . G scaffold11 ScafM SNP 0038.scaffold00149 355605 1 C A scaffold11 ScafM SNP 0038.scaffold00149 355611 1 T C scaffold11 ScafM SNP 0038.scaffold00149 355638 1 G T scaffold11 ScafM SNP 0038.scaffold00149 355677 1 A T scaffold11 ScafM SNP 0038.scaffold00149 355680 1 G A scaffold11 ScafM SNP 0038.scaffold00149 355726 1 C A scaffold11 ScafM SNP 0038.scaffold00149 355767 1 C G scaffold11 ScafM SNP 0038.scaffold00149 355773 1 A C scaffold11 Both SNP 0038.scaffold00149 355958 1 G A scaffold11 Both SNP 0038.scaffold00149 355998 1 A G scaffold11 ScafM SNP 0038.scaffold00149 356003 1 C T scaffold11 ScafM SNP 0038.scaffold00149 356015 1 T A scaffold11 Both SNP 0038.scaffold00149 356162 1 C G scaffold11 Both SNP 0038.scaffold00149 356259 1 C T scaffold11 Both SNP 0038.scaffold00149 356274 1 A C scaffold11 ScafM INDEL 0038.scaffold00149 356366 10 .......... AGCACAACTA scaffold11 ReadM SNP 0038.scaffold00149 356466 1 A G - ReadM SNP 0038.scaffold00149 356474 1 A G - ScafM SNP 0038.scaffold00149 356523 1 T C scaffold11 ScafM SNP 0038.scaffold00149 356533 1 C T scaffold11 Both SNP 0038.scaffold00149 356571 1 G T scaffold11 ScafM SNP 0038.scaffold00149 356668 1 A C scaffold11 ScafM SNP 0038.scaffold00149 356697 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 356721 7 TCCACAA ....... scaffold11 ScafM SNP 0038.scaffold00149 356732 1 T C scaffold11 ScafM SNP 0038.scaffold00149 356749 1 G T scaffold11 Both SNP 0038.scaffold00149 356763 1 G A scaffold11 ReadM SNP 0038.scaffold00149 356833 1 T C - ReadM SNP 0038.scaffold00149 356846 1 C T - ReadM SNP 0038.scaffold00149 356895 1 A G - Both SNP 0038.scaffold00149 356943 1 A G scaffold11 Both SNP 0038.scaffold00149 356955 1 A G scaffold11 Both SNP 0038.scaffold00149 356990 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 357010 1 G . scaffold11 ScafM INDEL 0038.scaffold00149 357013 1 C . scaffold11 ScafM INDEL 0038.scaffold00149 357016 1 G . scaffold11 ScafM SNP 0038.scaffold00149 357024 1 A G scaffold11 ScafM SNP 0038.scaffold00149 357038 1 T G scaffold11 ScafM SNP 0038.scaffold00149 357045 2 GG AA scaffold11 ScafM SNP 0038.scaffold00149 357049 1 A G scaffold11 ScafM SNP 0038.scaffold00149 357071 1 G A scaffold11 ScafM SNP 0038.scaffold00149 357080 1 C T scaffold11 ScafM SNP 0038.scaffold00149 357090 1 A G scaffold11 Both SNP 0038.scaffold00149 357126 1 C A scaffold11 Both SNP 0038.scaffold00149 357132 1 G A scaffold11 ReadM SNP 0038.scaffold00149 357170 1 C T - ReadM SNP 0038.scaffold00149 357256 1 A G - ReadM SNP 0038.scaffold00149 357281 1 C G - ReadM SNP 0038.scaffold00149 357306 1 T C - ReadM SNP 0038.scaffold00149 357407 1 T C - ReadM SNP 0038.scaffold00149 357945 1 C G - ReadM SNP 0038.scaffold00149 357951 1 G T - ReadM SNP 0038.scaffold00149 358195 1 A G - ReadM SNP 0038.scaffold00149 358203 1 T G - ReadM SNP 0038.scaffold00149 358226 1 T A - ReadM SNP 0038.scaffold00149 358358 1 A G - ReadM SNP 0038.scaffold00149 358431 1 C T - ReadM SNP 0038.scaffold00149 358433 1 A G - ReadM INDEL 0038.scaffold00149 358490 1 T . - ReadM SNP 0038.scaffold00149 358513 1 G A - ReadM SNP 0038.scaffold00149 358559 1 C T - ReadM SNP 0038.scaffold00149 358563 1 G T - Both SNP 0038.scaffold00149 358638 1 C T scaffold11 Both SNP 0038.scaffold00149 358669 1 G A scaffold11 Both SNP 0038.scaffold00149 358684 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 358713 1 . C scaffold11 ScafM SNP 0038.scaffold00149 358717 1 A T scaffold11 ScafM SNP 0038.scaffold00149 358725 1 T C scaffold11 ScafM SNP 0038.scaffold00149 358754 1 G T scaffold11 ScafM SNP 0038.scaffold00149 358762 1 C T scaffold11 Both SNP 0038.scaffold00149 358794 1 A C scaffold11 Both SNP 0038.scaffold00149 358798 1 G T scaffold11 Both SNP 0038.scaffold00149 358937 1 T A scaffold11 Both SNP 0038.scaffold00149 358976 1 T C scaffold11 Both SNP 0038.scaffold00149 359002 1 T C scaffold11 Both SNP 0038.scaffold00149 359052 1 A G scaffold11 Both SNP 0038.scaffold00149 359155 1 A G scaffold11 Both SNP 0038.scaffold00149 359192 1 A T scaffold11 Both SNP 0038.scaffold00149 359226 1 C T scaffold11 Both SNP 0038.scaffold00149 359347 1 C T scaffold11 Both SNP 0038.scaffold00149 359369 1 T C scaffold11 Both SNP 0038.scaffold00149 359388 1 C T scaffold11 Both SNP 0038.scaffold00149 359459 1 T C scaffold11 Both SNP 0038.scaffold00149 359482 1 T G scaffold11 Both SNP 0038.scaffold00149 359521 1 T C scaffold11 Both SNP 0038.scaffold00149 359564 1 T G scaffold11 ScafM SNP 0038.scaffold00149 359608 1 A G scaffold11 ScafM SNP 0038.scaffold00149 359611 1 A T scaffold11 ScafM SNP 0038.scaffold00149 359619 1 A T scaffold11 ScafM SNP 0038.scaffold00149 359642 1 G A scaffold11 ScafM SNP 0038.scaffold00149 359650 1 T C scaffold11 ScafM SNP 0038.scaffold00149 359674 2 AA GG scaffold11 ScafM SNP 0038.scaffold00149 359732 2 GC CA scaffold11 ScafM INDEL 0038.scaffold00149 359783 5 ..... TGAAA scaffold11 ScafM SNP 0038.scaffold00149 359840 1 T C scaffold11 ScafM SNP 0038.scaffold00149 359935 1 G A scaffold11 ScafM SNP 0038.scaffold00149 359978 1 A G scaffold11 ScafM SNP 0038.scaffold00149 359986 1 C A scaffold11 ScafM SNP 0038.scaffold00149 360020 1 A G scaffold11 ReadM SNP 0038.scaffold00149 360520 1 G T - ReadM SNP 0038.scaffold00149 360945 1 T G - ReadM SNP 0038.scaffold00149 360975 1 T C - ScafM SNP 0038.scaffold00149 361087 1 T C scaffold11 ScafM SNP 0038.scaffold00149 361114 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 361133 1 . A scaffold11 ScafM SNP 0038.scaffold00149 361135 1 T C scaffold11 ScafM SNP 0038.scaffold00149 361138 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 361149 34 ATCATTAAAATCGATGTTCTTGCTGAACCTATTC .................................. scaffold11 ScafM SNP 0038.scaffold00149 361211 1 C G scaffold11 ScafM SNP 0038.scaffold00149 361226 1 G A scaffold11 ScafM SNP 0038.scaffold00149 361244 1 G A scaffold11 ScafM SNP 0038.scaffold00149 361254 1 G A scaffold11 ScafM SNP 0038.scaffold00149 361259 1 C T scaffold11 ScafM SNP 0038.scaffold00149 361285 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 361313 19 ................... GTGTTCTTCGCACGATTTT scaffold11 ScafM INDEL 0038.scaffold00149 361314 10 .......... TTCGTCTTCG scaffold11 ScafM INDEL 0038.scaffold00149 361364 2 TT .. scaffold11 ScafM SNP 0038.scaffold00149 361374 1 A G scaffold11 ScafM SNP 0038.scaffold00149 361400 1 A C scaffold11 ScafM SNP 0038.scaffold00149 361452 1 T C scaffold11 ScafM SNP 0038.scaffold00149 361460 1 A C scaffold11 ScafM SNP 0038.scaffold00149 361483 1 T C scaffold11 ScafM SNP 0038.scaffold00149 361516 2 TT AG scaffold11 ScafM SNP 0038.scaffold00149 361519 2 GT TA scaffold11 ScafM SNP 0038.scaffold00149 361543 1 A G scaffold11 ScafM SNP 0038.scaffold00149 361546 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 361580 4 TTTT .... scaffold11 ScafM SNP 0038.scaffold00149 361592 1 C T scaffold11 ReadM SNP 0038.scaffold00149 361677 1 T A - ReadM SNP 0038.scaffold00149 361696 1 G T - ReadM SNP 0038.scaffold00149 361758 1 T C - Both SNP 0038.scaffold00149 362405 1 A G scaffold11 Both SNP 0038.scaffold00149 362433 1 A T scaffold11 ScafM SNP 0038.scaffold00149 362490 1 C A scaffold11 ScafM SNP 0038.scaffold00149 362498 1 T C scaffold11 ScafM SNP 0038.scaffold00149 362501 2 AC GA scaffold11 Both SNP 0038.scaffold00149 362601 1 G A scaffold11 Both SNP 0038.scaffold00149 362615 1 T A scaffold11 ScafM SNP 0038.scaffold00149 362658 1 G C scaffold11 ScafM SNP 0038.scaffold00149 362670 1 C G scaffold11 ScafM SNP 0038.scaffold00149 362672 1 A G scaffold11 ScafM SNP 0038.scaffold00149 362683 1 C T scaffold11 ScafM SNP 0038.scaffold00149 362688 1 G A scaffold11 Both SNP 0038.scaffold00149 362739 1 G T scaffold11 Both SNP 0038.scaffold00149 362755 1 T C scaffold11 ScafM SNP 0038.scaffold00149 362820 2 CC TA scaffold11 ScafM SNP 0038.scaffold00149 362855 1 C A scaffold11 ScafM SNP 0038.scaffold00149 362863 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 362882 27 ........................... GCAAAGTGTTTATCTCTTCTAGTCAAG scaffold11 ScafM INDEL 0038.scaffold00149 362883 2 .. TG scaffold11 ScafM INDEL 0038.scaffold00149 362884 13 ............. TTCTTCCCCTTAA scaffold11 ScafM INDEL 0038.scaffold00149 362886 10 .......... AAGGATTTTT scaffold11 Both SNP 0038.scaffold00149 362999 1 T A scaffold11 Both SNP 0038.scaffold00149 363007 1 C T scaffold11 Both SNP 0038.scaffold00149 363035 1 C G scaffold11 Both SNP 0038.scaffold00149 363082 1 A G scaffold11 Both SNP 0038.scaffold00149 363099 1 T C scaffold11 Both SNP 0038.scaffold00149 363104 1 C T scaffold11 Both SNP 0038.scaffold00149 363231 1 T C scaffold11 Both SNP 0038.scaffold00149 363234 1 A G scaffold11 Both SNP 0038.scaffold00149 363241 1 G A scaffold11 Both SNP 0038.scaffold00149 363287 1 A C scaffold11 Both SNP 0038.scaffold00149 363379 1 A T scaffold11 Both SNP 0038.scaffold00149 363391 1 C G scaffold11 Both SNP 0038.scaffold00149 363425 1 G C scaffold11 Both SNP 0038.scaffold00149 363456 1 T C scaffold11 Both SNP 0038.scaffold00149 363472 1 G A scaffold11 Both SNP 0038.scaffold00149 363522 1 C T scaffold11 ScafM SNP 0038.scaffold00149 363988 1 C T scaffold11 ScafM SNP 0038.scaffold00149 364007 1 G C scaffold11 ScafM SNP 0038.scaffold00149 364029 1 A T scaffold11 ScafM SNP 0038.scaffold00149 364067 1 T G scaffold11 Both SNP 0038.scaffold00149 364118 1 T C scaffold11 Both SNP 0038.scaffold00149 364182 1 A G scaffold11 Both SNP 0038.scaffold00149 364207 1 G C scaffold11 ScafM SNP 0038.scaffold00149 364250 1 G T scaffold11 ScafM SNP 0038.scaffold00149 364264 1 G A scaffold11 ScafM SNP 0038.scaffold00149 364291 1 C A scaffold11 ScafM SNP 0038.scaffold00149 364297 1 A G scaffold11 ScafM SNP 0038.scaffold00149 364299 2 GC AA scaffold11 ScafM SNP 0038.scaffold00149 364372 1 C A scaffold11 ScafM SNP 0038.scaffold00149 364375 1 C T scaffold11 ScafM SNP 0038.scaffold00149 364397 1 G T scaffold11 ScafM SNP 0038.scaffold00149 364425 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 364441 4 AACA .... scaffold11 ScafM SNP 0038.scaffold00149 364486 1 A G scaffold11 ScafM SNP 0038.scaffold00149 364956 1 C T scaffold11 ScafM SNP 0038.scaffold00149 364967 1 C T scaffold11 ReadM SNP 0038.scaffold00149 366652 1 C T - ReadM SNP 0038.scaffold00149 366698 1 C T - ReadM SNP 0038.scaffold00149 366854 1 G A - ReadM SNP 0038.scaffold00149 366880 1 G C - ReadM SNP 0038.scaffold00149 366919 1 A G - ReadM SNP 0038.scaffold00149 367426 1 C T - ReadM SNP 0038.scaffold00149 367466 1 T G - ReadM SNP 0038.scaffold00149 367648 1 A T - ReadM SNP 0038.scaffold00149 367670 1 C T - ReadM SNP 0038.scaffold00149 367744 1 A G - Both SNP 0038.scaffold00149 367877 1 C A scaffold11 Both SNP 0038.scaffold00149 367915 1 T C scaffold11 Both SNP 0038.scaffold00149 367919 1 G T scaffold11 ReadM SNP 0038.scaffold00149 368139 1 A G - ReadM SNP 0038.scaffold00149 368178 1 G T - ReadM SNP 0038.scaffold00149 368285 1 G T - ReadM SNP 0038.scaffold00149 368297 1 A C - ReadM SNP 0038.scaffold00149 368303 1 C A - ReadM SNP 0038.scaffold00149 368405 1 C T - ReadM SNP 0038.scaffold00149 368437 1 T A - ReadM SNP 0038.scaffold00149 368500 1 A T - ReadM SNP 0038.scaffold00149 368517 1 G A - ReadM SNP 0038.scaffold00149 369236 1 T C - Both SNP 0038.scaffold00149 369963 1 C A scaffold11 ScafM SNP 0038.scaffold00149 369976 1 G A scaffold11 ScafM SNP 0038.scaffold00149 370001 1 A C scaffold11 ScafM SNP 0038.scaffold00149 370021 1 T A scaffold11 ScafM SNP 0038.scaffold00149 370034 1 A G scaffold11 ScafM SNP 0038.scaffold00149 370051 2 CA TG scaffold11 ScafM SNP 0038.scaffold00149 370064 1 C T scaffold11 ReadM SNP 0038.scaffold00149 370128 1 G T - ReadM SNP 0038.scaffold00149 370140 1 G C - ReadM SNP 0038.scaffold00149 370193 1 T A - ReadM INDEL 0038.scaffold00149 370558 1 . A - ScafM SNP 0038.scaffold00149 370990 1 T C scaffold11 ScafM SNP 0038.scaffold00149 371004 1 A G scaffold11 ScafM SNP 0038.scaffold00149 371050 1 A G scaffold11 ScafM SNP 0038.scaffold00149 371060 2 GA AG scaffold11 ScafM SNP 0038.scaffold00149 371089 1 T G scaffold11 ScafM SNP 0038.scaffold00149 371096 1 G A scaffold11 ScafM SNP 0038.scaffold00149 371124 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 371132 8 ........ ATCGCAGC scaffold11 ScafM INDEL 0038.scaffold00149 371135 1 . G scaffold11 ScafM INDEL 0038.scaffold00149 371136 3 ... GAT scaffold11 ScafM SNP 0038.scaffold00149 371219 1 A G scaffold11 ScafM SNP 0038.scaffold00149 371443 1 G A scaffold11 ScafM SNP 0038.scaffold00149 371469 1 A T scaffold11 ScafM SNP 0038.scaffold00149 371557 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 371562 1 . G scaffold11 ScafM INDEL 0038.scaffold00149 371563 1 . T scaffold11 ScafM SNP 0038.scaffold00149 371573 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 371579 2 .. TA scaffold11 ScafM SNP 0038.scaffold00149 371584 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 371608 1 A . scaffold11 ScafM SNP 0038.scaffold00149 371610 1 A T scaffold11 ReadM SNP 0038.scaffold00149 372161 1 C T - ScafM INDEL 0038.scaffold00149 372324 1 G . scaffold11 Both SNP 0038.scaffold00149 372338 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 372345 1 . T scaffold11 ReadM SNP 0038.scaffold00149 372511 1 T A - ReadM INDEL 0038.scaffold00149 372548 2 TT .. - ReadM SNP 0038.scaffold00149 372627 1 T C - ReadM SNP 0038.scaffold00149 372659 1 G C - ReadM SNP 0038.scaffold00149 372710 1 C A - ReadM SNP 0038.scaffold00149 372715 1 C T - ScafM SNP 0038.scaffold00149 372738 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 372771 27 TATGGATTACATACATCCTCCTCCATT ........................... scaffold11 ReadM SNP 0038.scaffold00149 372772 1 A C - ScafM SNP 0038.scaffold00149 372817 2 CC AT scaffold11 ScafM SNP 0038.scaffold00149 372821 1 C T scaffold11 ScafM SNP 0038.scaffold00149 372830 1 G A scaffold11 ScafM SNP 0038.scaffold00149 372874 1 C G scaffold11 ScafM SNP 0038.scaffold00149 372877 1 C A scaffold11 ScafM SNP 0038.scaffold00149 372919 1 C G scaffold11 ScafM SNP 0038.scaffold00149 372924 1 T G scaffold11 ScafM SNP 0038.scaffold00149 372950 1 C A scaffold11 ScafM SNP 0038.scaffold00149 372979 3 ACT CAA scaffold11 ReadM SNP 0038.scaffold00149 373003 1 C T - ReadM SNP 0038.scaffold00149 373042 1 G A - ReadM SNP 0038.scaffold00149 373123 1 C A - ReadM SNP 0038.scaffold00149 373341 1 G A - ReadM SNP 0038.scaffold00149 373391 1 A T - ReadM SNP 0038.scaffold00149 373612 1 A T - ReadM SNP 0038.scaffold00149 373653 1 T A - ReadM SNP 0038.scaffold00149 373722 1 A G - ReadM SNP 0038.scaffold00149 373815 1 T A - ReadM SNP 0038.scaffold00149 373854 1 C A - ReadM SNP 0038.scaffold00149 373920 1 A G - ReadM SNP 0038.scaffold00149 374001 1 A C - ReadM SNP 0038.scaffold00149 374199 1 A T - ReadM SNP 0038.scaffold00149 374221 1 A C - ReadM SNP 0038.scaffold00149 374250 1 A T - ReadM SNP 0038.scaffold00149 374263 1 G A - ReadM SNP 0038.scaffold00149 374401 1 T A - ReadM SNP 0038.scaffold00149 374475 1 A C - ReadM SNP 0038.scaffold00149 374492 1 A G - ReadM INDEL 0038.scaffold00149 374508 1 . A - ReadM SNP 0038.scaffold00149 374536 1 T C - ReadM SNP 0038.scaffold00149 374667 1 A G - Both SNP 0038.scaffold00149 374702 1 C T scaffold11 ReadM INDEL 0038.scaffold00149 374776 1 T . - ReadM SNP 0038.scaffold00149 374811 1 G A - ReadM SNP 0038.scaffold00149 374938 1 T C - ReadM SNP 0038.scaffold00149 375024 1 T C - ReadM SNP 0038.scaffold00149 375052 1 T C - ReadM SNP 0038.scaffold00149 375699 1 T C - ReadM SNP 0038.scaffold00149 375737 1 T C - ReadM INDEL 0038.scaffold00149 375779 2 .. AG - ReadM SNP 0038.scaffold00149 375838 1 A C - ReadM SNP 0038.scaffold00149 375863 1 T C - ReadM SNP 0038.scaffold00149 375893 1 T A - ScafM SNP 0038.scaffold00149 389671 1 C T scaffold3347 ScafM SNP 0038.scaffold00149 389673 1 A G scaffold3347 ScafM SNP 0038.scaffold00149 389677 1 A G scaffold3347 ScafM SNP 0038.scaffold00149 389680 1 C A scaffold3347 ScafM SNP 0038.scaffold00149 389687 1 A T scaffold3347 ScafM SNP 0038.scaffold00149 389709 1 T C scaffold3347 ScafM SNP 0038.scaffold00149 389716 1 T C scaffold3347 ScafM SNP 0038.scaffold00149 389780 1 G T scaffold3347 ScafM INDEL 0038.scaffold00149 389787 3 ... CGG scaffold3347 ScafM SNP 0038.scaffold00149 389789 1 A G scaffold3347 ScafM SNP 0038.scaffold00149 389796 1 T G scaffold3347 ScafM SNP 0038.scaffold00149 389809 1 C T scaffold3347 ScafM SNP 0038.scaffold00149 389820 1 C T scaffold3347 ScafM SNP 0038.scaffold00149 389828 1 C T scaffold3347 ScafM SNP 0038.scaffold00149 390425 1 C T scaffold11 ScafM SNP 0038.scaffold00149 390493 1 A G scaffold11 ScafM SNP 0038.scaffold00149 390583 1 C G scaffold11 ScafM SNP 0038.scaffold00149 390604 1 C T scaffold11 ScafM SNP 0038.scaffold00149 390653 1 G A scaffold11 Both SNP 0038.scaffold00149 390708 1 G A scaffold11 Both SNP 0038.scaffold00149 390736 1 G A scaffold11 Both SNP 0038.scaffold00149 390772 1 A G scaffold11 Both SNP 0038.scaffold00149 390812 1 T C scaffold11 ScafM SNP 0038.scaffold00149 390874 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 390878 8 ........ TGGTTGGC scaffold11 ScafM SNP 0038.scaffold00149 390893 1 T C scaffold11 ScafM SNP 0038.scaffold00149 390923 1 G T scaffold11 ScafM SNP 0038.scaffold00149 390940 1 G A scaffold11 ReadM SNP 0038.scaffold00149 394302 1 C T - ScafM INDEL 0038.scaffold00149 396303 1 . G scaffold11 ScafM INDEL 0038.scaffold00149 396307 1 C . scaffold11 ScafM SNP 0038.scaffold00149 396314 1 C T scaffold11 ScafM SNP 0038.scaffold00149 396338 1 A T scaffold11 ScafM SNP 0038.scaffold00149 396387 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 396481 1 A . scaffold11 ScafM SNP 0038.scaffold00149 396539 1 C T scaffold11 ScafM SNP 0038.scaffold00149 397012 1 A G scaffold11 ScafM SNP 0038.scaffold00149 397363 1 A C scaffold11 ScafM INDEL 0038.scaffold00149 397372 1 G . scaffold11 ScafM SNP 0038.scaffold00149 397411 1 G A scaffold11 ScafM SNP 0038.scaffold00149 397414 1 A G scaffold11 ScafM SNP 0038.scaffold00149 397420 1 A C scaffold11 ScafM SNP 0038.scaffold00149 397437 1 C T scaffold11 ScafM SNP 0038.scaffold00149 397439 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 397461 4 .... AAAA scaffold11 ScafM SNP 0038.scaffold00149 397463 1 T A scaffold11 ScafM SNP 0038.scaffold00149 397467 1 A G scaffold11 ScafM SNP 0038.scaffold00149 397484 1 T C scaffold11 Both SNP 0038.scaffold00149 397755 1 C T scaffold11 Both SNP 0038.scaffold00149 397835 1 G A scaffold11 Both SNP 0038.scaffold00149 398029 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 398058 3 ... ATA scaffold11 Both SNP 0038.scaffold00149 398084 1 C G scaffold11 Both SNP 0038.scaffold00149 398118 1 G T scaffold11 Both SNP 0038.scaffold00149 398322 1 A G scaffold11 ScafM SNP 0038.scaffold00149 398407 1 G T scaffold11 ScafM SNP 0038.scaffold00149 398432 1 A G scaffold11 ScafM SNP 0038.scaffold00149 398435 1 C T scaffold11 ScafM SNP 0038.scaffold00149 398439 1 T G scaffold11 ScafM SNP 0038.scaffold00149 398516 1 T C scaffold11 ScafM SNP 0038.scaffold00149 398520 1 T G scaffold11 ScafM SNP 0038.scaffold00149 398528 1 A T scaffold11 ScafM SNP 0038.scaffold00149 398530 1 T C scaffold11 ScafM SNP 0038.scaffold00149 398535 1 A G scaffold11 ScafM SNP 0038.scaffold00149 398633 1 T G scaffold11 ScafM SNP 0038.scaffold00149 398705 3 GTT TAA scaffold11 ScafM SNP 0038.scaffold00149 398709 1 C A scaffold11 ScafM SNP 0038.scaffold00149 398825 1 A C scaffold11 ScafM SNP 0038.scaffold00149 398909 1 T C scaffold11 ScafM SNP 0038.scaffold00149 398911 1 G C scaffold11 ScafM SNP 0038.scaffold00149 398921 1 T G scaffold11 ScafM SNP 0038.scaffold00149 398925 1 A T scaffold11 ScafM SNP 0038.scaffold00149 398927 1 A T scaffold11 ScafM SNP 0038.scaffold00149 398929 1 A T scaffold11 ScafM SNP 0038.scaffold00149 399021 1 A T scaffold11 ScafM SNP 0038.scaffold00149 399036 1 C T scaffold11 ScafM SNP 0038.scaffold00149 399039 1 A T scaffold11 ScafM SNP 0038.scaffold00149 399060 1 C A scaffold11 ScafM SNP 0038.scaffold00149 399072 1 T C scaffold11 ScafM SNP 0038.scaffold00149 399165 1 T G scaffold11 ScafM SNP 0038.scaffold00149 399193 1 A G scaffold11 ScafM SNP 0038.scaffold00149 404677 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 404699 1 . A scaffold11 ScafM SNP 0038.scaffold00149 404759 1 T C scaffold11 ScafM SNP 0038.scaffold00149 404764 1 A G scaffold11 ScafM SNP 0038.scaffold00149 404770 1 A G scaffold11 ReadM SNP 0038.scaffold00149 405058 1 G A - ReadM SNP 0038.scaffold00149 405102 1 T C - ScafM SNP 0038.scaffold00149 405236 1 G A scaffold11 ScafM SNP 0038.scaffold00149 405250 1 T A scaffold11 ScafM SNP 0038.scaffold00149 405266 1 G A scaffold11 ScafM SNP 0038.scaffold00149 405275 1 T G scaffold11 ScafM SNP 0038.scaffold00149 405299 1 A G scaffold11 ScafM SNP 0038.scaffold00149 405303 1 A G scaffold11 ScafM SNP 0038.scaffold00149 405350 1 G A scaffold11 ScafM SNP 0038.scaffold00149 405421 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 405425 1 . T scaffold11 ScafM SNP 0038.scaffold00149 405933 2 AG TA scaffold11 ScafM INDEL 0038.scaffold00149 405951 1 A . scaffold11 ScafM INDEL 0038.scaffold00149 405955 6 CACAAA ...... scaffold11 ScafM SNP 0038.scaffold00149 406003 1 C T scaffold11 ScafM SNP 0038.scaffold00149 406012 1 G A scaffold11 ScafM SNP 0038.scaffold00149 406026 1 G A scaffold11 ScafM SNP 0038.scaffold00149 406055 1 G A scaffold11 ScafM SNP 0038.scaffold00149 406073 1 T C scaffold11 ScafM SNP 0038.scaffold00149 406084 1 T C scaffold11 ScafM SNP 0038.scaffold00149 406090 1 A C scaffold11 ScafM SNP 0038.scaffold00149 406155 1 C A scaffold11 ReadM SNP 0038.scaffold00149 406238 1 G A - ReadM SNP 0038.scaffold00149 406371 1 C T - ReadM SNP 0038.scaffold00149 406642 1 G A - ReadM SNP 0038.scaffold00149 406663 1 T A - ReadM SNP 0038.scaffold00149 406800 1 A G - ReadM SNP 0038.scaffold00149 406831 1 T C - ReadM SNP 0038.scaffold00149 406875 1 C T - ReadM SNP 0038.scaffold00149 406947 1 C A - ReadM SNP 0038.scaffold00149 406989 1 C T - ReadM SNP 0038.scaffold00149 407027 1 A G - ReadM SNP 0038.scaffold00149 407132 1 T C - ReadM SNP 0038.scaffold00149 407162 1 A G - ReadM SNP 0038.scaffold00149 407183 1 A G - ReadM SNP 0038.scaffold00149 407192 1 G A - ScafM INDEL 0038.scaffold00149 407269 4 .... TATA scaffold11 ScafM SNP 0038.scaffold00149 407275 1 G C scaffold11 ScafM SNP 0038.scaffold00149 407282 1 T C scaffold11 ReadM SNP 0038.scaffold00149 407387 1 G A - ReadM INDEL 0038.scaffold00149 407401 1 T . - ReadM SNP 0038.scaffold00149 407426 1 T A - ReadM SNP 0038.scaffold00149 407525 1 T C - ReadM SNP 0038.scaffold00149 407529 1 T C - ScafM SNP 0038.scaffold00149 407649 1 G A scaffold11 Both SNP 0038.scaffold00149 407672 1 G C scaffold11 ReadM SNP 0038.scaffold00149 407717 1 C A - ReadM SNP 0038.scaffold00149 407720 1 C T - ReadM INDEL 0038.scaffold00149 407807 3 ... TAA - ReadM SNP 0038.scaffold00149 407954 1 G C - ReadM SNP 0038.scaffold00149 407959 1 G A - ReadM SNP 0038.scaffold00149 408015 1 T C - ReadM SNP 0038.scaffold00149 408020 1 C T - ReadM SNP 0038.scaffold00149 408300 1 A T - ReadM INDEL 0038.scaffold00149 408304 2 TC .. - ReadM SNP 0038.scaffold00149 408383 1 A G - ReadM SNP 0038.scaffold00149 408406 1 G C - ReadM SNP 0038.scaffold00149 408415 1 C T - ReadM SNP 0038.scaffold00149 408488 1 G A - ReadM SNP 0038.scaffold00149 408640 1 C G - ReadM SNP 0038.scaffold00149 408643 1 A C - ReadM SNP 0038.scaffold00149 408687 1 T C - ReadM SNP 0038.scaffold00149 408754 1 T C - ReadM SNP 0038.scaffold00149 408757 1 T C - ReadM SNP 0038.scaffold00149 408767 1 A G - ReadM SNP 0038.scaffold00149 408829 1 T C - ReadM SNP 0038.scaffold00149 408833 1 A T - ReadM SNP 0038.scaffold00149 408908 1 T A - ReadM SNP 0038.scaffold00149 408917 1 C A - ReadM SNP 0038.scaffold00149 408927 1 T C - ReadM SNP 0038.scaffold00149 408988 1 A C - ReadM SNP 0038.scaffold00149 409008 1 A G - ReadM SNP 0038.scaffold00149 409119 1 A T - ReadM SNP 0038.scaffold00149 409141 1 C G - Both SNP 0038.scaffold00149 409156 1 C T scaffold11 ReadM SNP 0038.scaffold00149 409222 1 G A - ReadM SNP 0038.scaffold00149 409308 1 T C - ReadM SNP 0038.scaffold00149 409316 1 G A - ReadM SNP 0038.scaffold00149 409367 1 G C - ReadM SNP 0038.scaffold00149 409665 1 G A - ReadM SNP 0038.scaffold00149 409684 1 G T - ReadM SNP 0038.scaffold00149 409810 1 A C - ReadM SNP 0038.scaffold00149 409930 1 G T - ReadM SNP 0038.scaffold00149 409948 1 A G - ReadM SNP 0038.scaffold00149 410074 1 T A - ReadM SNP 0038.scaffold00149 410103 1 C T - ReadM SNP 0038.scaffold00149 410122 1 G A - ReadM SNP 0038.scaffold00149 410197 1 T C - ReadM INDEL 0038.scaffold00149 410234 1 G . - ReadM SNP 0038.scaffold00149 410316 1 G T - ReadM SNP 0038.scaffold00149 410342 1 A G - ReadM SNP 0038.scaffold00149 410372 1 G A - ReadM SNP 0038.scaffold00149 410504 1 G A - ReadM SNP 0038.scaffold00149 410650 1 A T - ReadM SNP 0038.scaffold00149 410672 1 C T - ReadM SNP 0038.scaffold00149 410984 1 G T - ReadM SNP 0038.scaffold00149 411135 1 A C - ReadM SNP 0038.scaffold00149 411197 1 T C - ReadM SNP 0038.scaffold00149 411290 1 A C - ReadM SNP 0038.scaffold00149 411432 1 T C - ReadM SNP 0038.scaffold00149 411436 1 A C - ReadM SNP 0038.scaffold00149 411463 1 C T - ReadM SNP 0038.scaffold00149 411522 1 T G - ReadM SNP 0038.scaffold00149 411614 1 C T - ReadM SNP 0038.scaffold00149 411623 1 A C - ReadM SNP 0038.scaffold00149 411644 1 A G - ReadM SNP 0038.scaffold00149 411806 1 A G - ReadM SNP 0038.scaffold00149 412100 1 G A - ReadM SNP 0038.scaffold00149 412185 1 C G - ReadM SNP 0038.scaffold00149 412344 1 A G - ReadM SNP 0038.scaffold00149 412370 1 G A - ReadM SNP 0038.scaffold00149 412382 1 G A - ScafM INDEL 0038.scaffold00149 412623 2 CA .. scaffold11 ScafM SNP 0038.scaffold00149 412646 1 C T scaffold11 ScafM SNP 0038.scaffold00149 412648 1 A G scaffold11 ScafM SNP 0038.scaffold00149 412669 1 G T scaffold11 ScafM SNP 0038.scaffold00149 412725 1 A T scaffold11 ScafM SNP 0038.scaffold00149 412731 1 G C scaffold11 ScafM SNP 0038.scaffold00149 412749 1 G A scaffold11 ScafM SNP 0038.scaffold00149 412777 1 C T scaffold11 ScafM SNP 0038.scaffold00149 412784 1 A G scaffold11 ScafM SNP 0038.scaffold00149 412792 1 T C scaffold11 ScafM SNP 0038.scaffold00149 412811 1 G A scaffold11 ReadM SNP 0038.scaffold00149 412878 1 G A - ReadM SNP 0038.scaffold00149 412901 1 A C - Both SNP 0038.scaffold00149 413010 1 A G scaffold11 Both SNP 0038.scaffold00149 413044 1 C T scaffold11 Both SNP 0038.scaffold00149 413077 1 G A scaffold11 Both SNP 0038.scaffold00149 413089 1 A C scaffold11 ScafM SNP 0038.scaffold00149 413129 1 G A scaffold11 ScafM SNP 0038.scaffold00149 413144 1 G T scaffold11 ScafM SNP 0038.scaffold00149 413175 1 A C scaffold11 ScafM SNP 0038.scaffold00149 413178 2 GG TT scaffold11 Both SNP 0038.scaffold00149 413214 1 C G scaffold11 Both SNP 0038.scaffold00149 413219 1 G A scaffold11 Both SNP 0038.scaffold00149 413282 1 A C scaffold11 Both SNP 0038.scaffold00149 413422 1 T C scaffold11 Both SNP 0038.scaffold00149 413464 1 A G scaffold11 Both SNP 0038.scaffold00149 413496 1 T C scaffold11 ScafM SNP 0038.scaffold00149 413621 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 413654 4 .... AACG scaffold11 ScafM SNP 0038.scaffold00149 413674 1 G C scaffold11 ScafM INDEL 0038.scaffold00149 413690 1 . C scaffold11 ScafM SNP 0038.scaffold00149 413692 1 A T scaffold11 ScafM SNP 0038.scaffold00149 413873 2 AC GT scaffold11 Both SNP 0038.scaffold00149 413934 1 G A scaffold11 Both SNP 0038.scaffold00149 413976 1 T C scaffold11 Both SNP 0038.scaffold00149 414063 1 G A scaffold11 ReadM SNP 0038.scaffold00149 414143 1 G A - ReadM SNP 0038.scaffold00149 414182 1 A G - ReadM SNP 0038.scaffold00149 414418 1 A G - ReadM SNP 0038.scaffold00149 414535 1 T G - ReadM SNP 0038.scaffold00149 414559 1 T C - ReadM SNP 0038.scaffold00149 414707 1 C T - ReadM SNP 0038.scaffold00149 414729 1 A G - ReadM SNP 0038.scaffold00149 414758 1 A G - ReadM SNP 0038.scaffold00149 414786 1 T A - ReadM SNP 0038.scaffold00149 414909 1 C T - ReadM SNP 0038.scaffold00149 414940 1 G A - ReadM INDEL 0038.scaffold00149 414983 1 A . - ReadM SNP 0038.scaffold00149 415051 1 T C - ReadM SNP 0038.scaffold00149 415092 1 T A - ReadM INDEL 0038.scaffold00149 415095 1 . C - ReadM SNP 0038.scaffold00149 415199 1 C A - ScafM SNP 0038.scaffold00149 415259 1 G A scaffold11 ScafM SNP 0038.scaffold00149 415271 1 T C scaffold11 ScafM SNP 0038.scaffold00149 415282 1 T C scaffold11 ScafM SNP 0038.scaffold00149 415297 1 G C scaffold11 ScafM SNP 0038.scaffold00149 415341 1 T G scaffold11 Both INDEL 0038.scaffold00149 415512 2 AC .. scaffold11 Both SNP 0038.scaffold00149 415605 1 T C scaffold11 ReadM SNP 0038.scaffold00149 415944 1 T G - ScafM SNP 0038.scaffold00149 416178 1 A T scaffold11 ScafM SNP 0038.scaffold00149 416181 1 T A scaffold11 ScafM SNP 0038.scaffold00149 416192 1 C T scaffold11 ScafM SNP 0038.scaffold00149 416195 1 G A scaffold11 ScafM SNP 0038.scaffold00149 416238 1 G T scaffold11 ScafM SNP 0038.scaffold00149 416304 1 C G scaffold11 ScafM SNP 0038.scaffold00149 416318 1 G C scaffold11 ScafM SNP 0038.scaffold00149 416337 1 T C scaffold11 ScafM SNP 0038.scaffold00149 416345 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 416378 1 . A scaffold11 ScafM SNP 0038.scaffold00149 416382 1 T A scaffold11 ScafM SNP 0038.scaffold00149 416416 1 G A scaffold11 ScafM SNP 0038.scaffold00149 416441 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 416444 1 . A scaffold11 ScafM SNP 0038.scaffold00149 416488 1 A T scaffold11 ScafM INDEL 0038.scaffold00149 416494 2 .. CC scaffold11 Both SNP 0038.scaffold00149 416535 1 T G scaffold11 Both SNP 0038.scaffold00149 416539 1 G A scaffold11 Both SNP 0038.scaffold00149 416584 1 A C scaffold11 Both SNP 0038.scaffold00149 416706 1 G A scaffold11 Both INDEL 0038.scaffold00149 416711 1 . G scaffold11 ScafM SNP 0038.scaffold00149 416751 1 G A scaffold11 ScafM SNP 0038.scaffold00149 416762 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 416803 2 .. AG scaffold11 Both SNP 0038.scaffold00149 416842 1 C A scaffold11 Both INDEL 0038.scaffold00149 416852 1 A . scaffold11 Both SNP 0038.scaffold00149 416894 1 C A scaffold11 ReadM SNP 0038.scaffold00149 416997 1 A C - ReadM SNP 0038.scaffold00149 417012 1 C A - ReadM SNP 0038.scaffold00149 417019 1 A G - Both SNP 0038.scaffold00149 417070 1 G A scaffold11 Both SNP 0038.scaffold00149 417075 1 T C scaffold11 Both SNP 0038.scaffold00149 417150 1 T C scaffold11 ScafM SNP 0038.scaffold00149 417177 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 417199 37 ..................................... ATGTCTCTTGCTCTTCACCCCACATTTCTTCAACCCC scaffold11 ScafM SNP 0038.scaffold00149 417221 1 T C scaffold11 ScafM SNP 0038.scaffold00149 417235 1 T C scaffold11 ScafM SNP 0038.scaffold00149 417238 1 A C scaffold11 ScafM SNP 0038.scaffold00149 417258 1 C T scaffold11 ScafM SNP 0038.scaffold00149 417288 1 A C scaffold11 ScafM SNP 0038.scaffold00149 417326 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 417333 3 ... CGT scaffold11 ScafM SNP 0038.scaffold00149 417350 1 G A scaffold11 Both SNP 0038.scaffold00149 417393 1 T C scaffold11 Both SNP 0038.scaffold00149 417397 1 G A scaffold11 Both SNP 0038.scaffold00149 417454 1 C T scaffold11 Both SNP 0038.scaffold00149 417499 1 A G scaffold11 Both SNP 0038.scaffold00149 417522 1 T C scaffold11 Both SNP 0038.scaffold00149 417564 1 C T scaffold11 ScafM SNP 0038.scaffold00149 417732 1 C T scaffold11 ScafM SNP 0038.scaffold00149 417828 1 T C scaffold11 ScafM SNP 0038.scaffold00149 417836 1 T G scaffold11 ScafM SNP 0038.scaffold00149 417847 1 A T scaffold11 ScafM INDEL 0038.scaffold00149 417899 4 TAAT .... scaffold11 ScafM SNP 0038.scaffold00149 418006 1 C T scaffold11 ScafM SNP 0038.scaffold00149 418009 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 418057 2 .. TT scaffold11 ScafM SNP 0038.scaffold00149 418111 1 A G scaffold11 ScafM SNP 0038.scaffold00149 418121 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 418139 1 T . scaffold11 ScafM SNP 0038.scaffold00149 418214 1 T A scaffold11 ScafM SNP 0038.scaffold00149 418217 1 A G scaffold11 ScafM SNP 0038.scaffold00149 418289 1 C T scaffold11 ScafM SNP 0038.scaffold00149 418293 1 T A scaffold11 ScafM SNP 0038.scaffold00149 418314 1 T C scaffold11 ScafM SNP 0038.scaffold00149 418383 1 T C scaffold11 ScafM SNP 0038.scaffold00149 418395 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 418397 2 AC .. scaffold11 ScafM SNP 0038.scaffold00149 418415 1 A G scaffold11 ScafM SNP 0038.scaffold00149 418537 1 A G scaffold11 ScafM SNP 0038.scaffold00149 418626 1 A G scaffold11 ScafM SNP 0038.scaffold00149 418634 1 A C scaffold11 ScafM SNP 0038.scaffold00149 418651 1 C G scaffold11 ScafM SNP 0038.scaffold00149 418655 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 418657 1 . T scaffold11 ScafM SNP 0038.scaffold00149 418826 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 418857 1 . T scaffold11 ScafM SNP 0038.scaffold00149 418893 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 418925 2 .. TC scaffold11 ScafM SNP 0038.scaffold00149 418991 1 C G scaffold11 ScafM INDEL 0038.scaffold00149 419010 3 ... ATA scaffold11 ScafM SNP 0038.scaffold00149 419034 1 T C scaffold11 ScafM SNP 0038.scaffold00149 419036 1 T G scaffold11 ScafM SNP 0038.scaffold00149 419066 1 T G scaffold11 ScafM SNP 0038.scaffold00149 419072 1 A C scaffold11 ScafM SNP 0038.scaffold00149 419085 1 C T scaffold11 ScafM SNP 0038.scaffold00149 419127 1 C A scaffold11 ScafM SNP 0038.scaffold00149 419133 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 419163 3 ACT ... scaffold11 ScafM SNP 0038.scaffold00149 419191 1 C G scaffold11 ScafM SNP 0038.scaffold00149 419248 1 A T scaffold11 ScafM SNP 0038.scaffold00149 419262 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 419274 3 ... TTT scaffold11 ScafM SNP 0038.scaffold00149 419279 2 AG TA scaffold11 ScafM SNP 0038.scaffold00149 419377 1 C A scaffold11 ScafM SNP 0038.scaffold00149 419399 1 G C scaffold11 ScafM SNP 0038.scaffold00149 419402 1 T A scaffold11 ScafM SNP 0038.scaffold00149 419541 1 C A scaffold11 ScafM SNP 0038.scaffold00149 419552 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 419557 2 .. AC scaffold11 ScafM SNP 0038.scaffold00149 419567 1 A T scaffold11 ScafM SNP 0038.scaffold00149 419576 1 C T scaffold11 ScafM SNP 0038.scaffold00149 419611 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 419646 13 ............. AAATTAATGTAAG scaffold11 ScafM SNP 0038.scaffold00149 419654 1 T C scaffold11 ScafM SNP 0038.scaffold00149 419724 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 419733 11 CGGTCCAAATA ........... scaffold11 ScafM SNP 0038.scaffold00149 419758 1 C G scaffold11 ScafM INDEL 0038.scaffold00149 419830 24 ACCAATGAACATTATGAATTAATG ........................ scaffold11 ScafM SNP 0038.scaffold00149 419917 1 C A scaffold11 ScafM SNP 0038.scaffold00149 419986 1 T G scaffold11 ScafM SNP 0038.scaffold00149 420064 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 420069 2 TC .. scaffold11 ScafM INDEL 0038.scaffold00149 420072 1 C . scaffold11 ScafM INDEL 0038.scaffold00149 420088 1 A . scaffold11 ScafM SNP 0038.scaffold00149 420278 1 A G scaffold11 ScafM SNP 0038.scaffold00149 420319 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 420347 1 C . scaffold11 ScafM SNP 0038.scaffold00149 420368 3 TTC CCT scaffold11 ScafM SNP 0038.scaffold00149 420379 1 C G scaffold11 ScafM SNP 0038.scaffold00149 420646 1 C T scaffold11 ScafM SNP 0038.scaffold00149 420684 2 TA CT scaffold11 ScafM SNP 0038.scaffold00149 421086 1 G A scaffold11 ScafM SNP 0038.scaffold00149 421111 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421115 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421131 1 T C scaffold11 ScafM SNP 0038.scaffold00149 421157 1 T C scaffold11 ScafM SNP 0038.scaffold00149 421168 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 421197 1 C . scaffold11 ScafM SNP 0038.scaffold00149 421234 1 T C scaffold11 ScafM SNP 0038.scaffold00149 421259 1 A G scaffold11 ScafM SNP 0038.scaffold00149 421261 1 A C scaffold11 ScafM SNP 0038.scaffold00149 421276 1 A G scaffold11 ScafM SNP 0038.scaffold00149 421298 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421312 1 G T scaffold11 ScafM SNP 0038.scaffold00149 421318 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421320 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421322 1 G A scaffold11 ScafM SNP 0038.scaffold00149 421354 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421356 1 A G scaffold11 ScafM SNP 0038.scaffold00149 421386 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 421392 1 T . scaffold11 ScafM SNP 0038.scaffold00149 421394 1 G A scaffold11 ScafM SNP 0038.scaffold00149 421402 1 T C scaffold11 ScafM SNP 0038.scaffold00149 421408 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 421414 1 . T scaffold11 ScafM INDEL 0038.scaffold00149 421459 4 CGCA .... scaffold11 ScafM SNP 0038.scaffold00149 421490 2 TG CA scaffold11 ScafM SNP 0038.scaffold00149 421513 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421516 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421576 1 A G scaffold11 ScafM SNP 0038.scaffold00149 421610 1 C T scaffold11 ScafM SNP 0038.scaffold00149 421627 1 A G scaffold11 ScafM SNP 0038.scaffold00149 421631 1 A G scaffold11 ScafM SNP 0038.scaffold00149 422790 1 G A scaffold11 ScafM SNP 0038.scaffold00149 422805 1 A T scaffold11 ScafM SNP 0038.scaffold00149 422807 1 C T scaffold11 ScafM SNP 0038.scaffold00149 422862 1 G C scaffold11 ScafM SNP 0038.scaffold00149 423040 1 T G scaffold11 ScafM INDEL 0038.scaffold00149 423043 1 . T scaffold11 ScafM SNP 0038.scaffold00149 423057 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 423058 1 . C scaffold11 ScafM SNP 0038.scaffold00149 423325 1 A T scaffold11 ScafM SNP 0038.scaffold00149 423352 1 C G scaffold11 ScafM SNP 0038.scaffold00149 423354 1 C A scaffold11 ScafM SNP 0038.scaffold00149 423449 1 G A scaffold11 ScafM SNP 0038.scaffold00149 423480 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 423506 2 .G AC scaffold11 ScafM SNP 0038.scaffold00149 423531 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 423587 3 ATT ... scaffold11 ScafM SNP 0038.scaffold00149 423623 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 424008 1 . T scaffold11 ScafM SNP 0038.scaffold00149 424012 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 424020 1 C . scaffold11 ScafM INDEL 0038.scaffold00149 424029 4 .... CTAA scaffold11 ScafM INDEL 0038.scaffold00149 424032 2 .. GT scaffold11 ScafM SNP 0038.scaffold00149 424037 1 C T scaffold11 ScafM SNP 0038.scaffold00149 424043 1 C T scaffold11 ScafM SNP 0038.scaffold00149 424045 1 C A scaffold11 ScafM SNP 0038.scaffold00149 424054 1 T C scaffold11 ScafM SNP 0038.scaffold00149 424062 1 A G scaffold11 ScafM SNP 0038.scaffold00149 424076 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 424111 1 C . scaffold11 ScafM SNP 0038.scaffold00149 424238 1 G T scaffold11 ScafM SNP 0038.scaffold00149 424540 1 C T scaffold11 ScafM SNP 0038.scaffold00149 424563 1 T A scaffold11 ScafM SNP 0038.scaffold00149 424577 1 C T scaffold11 ScafM SNP 0038.scaffold00149 424590 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 424618 1 . T scaffold11 ScafM SNP 0038.scaffold00149 424736 1 T G scaffold11 ScafM SNP 0038.scaffold00149 424756 1 T A scaffold11 ScafM SNP 0038.scaffold00149 424790 1 T C scaffold11 ScafM SNP 0038.scaffold00149 424822 1 A G scaffold11 ScafM SNP 0038.scaffold00149 424841 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 425223 1 T . scaffold11 ScafM SNP 0038.scaffold00149 425241 1 G A scaffold11 Both SNP 0038.scaffold00149 425304 1 C T scaffold11 Both SNP 0038.scaffold00149 425355 1 C A scaffold11 Both SNP 0038.scaffold00149 425399 1 T C scaffold11 ReadM SNP 0038.scaffold00149 425441 1 C A - ReadM SNP 0038.scaffold00149 425458 1 A C - ReadM SNP 0038.scaffold00149 425583 1 A G - Both SNP 0038.scaffold00149 425735 1 G A scaffold11 Both SNP 0038.scaffold00149 425780 1 C G scaffold11 Both SNP 0038.scaffold00149 425825 1 G A scaffold11 ScafM SNP 0038.scaffold00149 425842 1 G C scaffold11 ScafM SNP 0038.scaffold00149 425864 1 G A scaffold11 ScafM SNP 0038.scaffold00149 425889 1 T C scaffold11 ScafM SNP 0038.scaffold00149 425892 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 425919 2 .. GA scaffold11 ScafM INDEL 0038.scaffold00149 425940 1 . G scaffold11 ScafM SNP 0038.scaffold00149 425964 1 A G scaffold11 Both SNP 0038.scaffold00149 427732 1 A C scaffold11 Both SNP 0038.scaffold00149 427772 1 C T scaffold11 Both SNP 0038.scaffold00149 427959 1 T A scaffold11 Both SNP 0038.scaffold00149 427994 1 T G scaffold11 Both INDEL 0038.scaffold00149 428074 1 . T scaffold11 ScafM SNP 0038.scaffold00149 428292 2 CA GG scaffold11 Both SNP 0038.scaffold00149 428399 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 428452 1 . T scaffold11 ScafM SNP 0038.scaffold00149 428476 1 A C scaffold11 Both SNP 0038.scaffold00149 428524 1 T C scaffold11 ScafM SNP 0038.scaffold00149 428582 1 G T scaffold11 ScafM SNP 0038.scaffold00149 428598 2 TT GC scaffold11 ScafM SNP 0038.scaffold00149 428818 1 G A scaffold11 ScafM SNP 0038.scaffold00149 428851 1 C T scaffold11 ScafM SNP 0038.scaffold00149 428857 1 A G scaffold11 ScafM INDEL 0038.scaffold00149 428872 1 T . scaffold11 ScafM SNP 0038.scaffold00149 428888 1 A T scaffold11 ScafM SNP 0038.scaffold00149 428981 1 A T scaffold11 ScafM SNP 0038.scaffold00149 429001 1 A G scaffold11 ScafM SNP 0038.scaffold00149 429466 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 429471 14 ATGTTACATATTAC .............. scaffold11 ScafM INDEL 0038.scaffold00149 429539 7 ....... AATTTTT scaffold11 ScafM SNP 0038.scaffold00149 429545 1 T A scaffold11 ScafM SNP 0038.scaffold00149 429650 1 A C scaffold11 ScafM SNP 0038.scaffold00149 429652 1 G A scaffold11 Both SNP 0038.scaffold00149 429720 1 C T scaffold11 Both SNP 0038.scaffold00149 429769 1 T C scaffold11 Both SNP 0038.scaffold00149 429780 1 C G scaffold11 Both SNP 0038.scaffold00149 429790 1 C T scaffold11 Both SNP 0038.scaffold00149 429809 1 G C scaffold11 Both SNP 0038.scaffold00149 430336 1 G A scaffold11 Both SNP 0038.scaffold00149 430400 1 G A scaffold11 Both SNP 0038.scaffold00149 430520 1 T C scaffold11 Both SNP 0038.scaffold00149 430561 1 T C scaffold11 Both SNP 0038.scaffold00149 430627 1 T C scaffold11 Both SNP 0038.scaffold00149 430711 1 A G scaffold11 Both SNP 0038.scaffold00149 430727 1 A C scaffold11 Both SNP 0038.scaffold00149 430761 1 T G scaffold11 ScafM SNP 0038.scaffold00149 430784 2 AT GC scaffold11 ScafM SNP 0038.scaffold00149 430793 1 C G scaffold11 Both SNP 0038.scaffold00149 430987 1 C A scaffold11 Both SNP 0038.scaffold00149 431022 1 A G scaffold11 Both SNP 0038.scaffold00149 431052 1 A C scaffold11 Both SNP 0038.scaffold00149 431083 1 C T scaffold11 Both SNP 0038.scaffold00149 431179 1 A G scaffold11 Both SNP 0038.scaffold00149 431217 1 C T scaffold11 Both SNP 0038.scaffold00149 431224 1 T C scaffold11 Both SNP 0038.scaffold00149 431249 1 G A scaffold11 Both SNP 0038.scaffold00149 431346 1 A G scaffold11 Both SNP 0038.scaffold00149 431424 1 T C scaffold11 Both SNP 0038.scaffold00149 431428 1 A G scaffold11 Both SNP 0038.scaffold00149 431463 1 A G scaffold11 Both SNP 0038.scaffold00149 431604 1 G A scaffold11 Both SNP 0038.scaffold00149 431701 1 G C scaffold11 Both SNP 0038.scaffold00149 431837 1 T A scaffold11 Both SNP 0038.scaffold00149 431952 1 A G scaffold11 Both SNP 0038.scaffold00149 432114 1 A G scaffold11 Both SNP 0038.scaffold00149 432246 1 A G scaffold11 Both SNP 0038.scaffold00149 432363 1 A C scaffold11 Both SNP 0038.scaffold00149 432378 1 A G scaffold11 Both SNP 0038.scaffold00149 432672 1 C T scaffold11 Both SNP 0038.scaffold00149 432862 1 T A scaffold11 Both SNP 0038.scaffold00149 432893 1 T A scaffold11 Both SNP 0038.scaffold00149 432905 1 C G scaffold11 Both SNP 0038.scaffold00149 432937 1 C T scaffold11 Both SNP 0038.scaffold00149 432964 1 A G scaffold11 Both SNP 0038.scaffold00149 433316 1 T G scaffold11 Both SNP 0038.scaffold00149 433330 1 A G scaffold11 Both SNP 0038.scaffold00149 433342 1 C T scaffold11 Both SNP 0038.scaffold00149 433521 1 C T scaffold11 Both SNP 0038.scaffold00149 433554 1 T C scaffold11 Both SNP 0038.scaffold00149 433635 1 A G scaffold11 Both SNP 0038.scaffold00149 433740 1 T C scaffold11 Both SNP 0038.scaffold00149 433874 1 C G scaffold11 Both SNP 0038.scaffold00149 433968 1 G A scaffold11 Both SNP 0038.scaffold00149 434009 1 A T scaffold11 Both SNP 0038.scaffold00149 434061 1 T G scaffold11 Both SNP 0038.scaffold00149 434075 1 T C scaffold11 Both SNP 0038.scaffold00149 434135 1 C T scaffold11 ScafM INDEL 0038.scaffold00149 434205 4 .... ACTA scaffold11 ScafM SNP 0038.scaffold00149 434238 1 A T scaffold11 Both SNP 0038.scaffold00149 434265 1 A T scaffold11 Both SNP 0038.scaffold00149 434274 1 T C scaffold11 ScafM INDEL 0038.scaffold00149 434373 2 .. AG scaffold11 ScafM INDEL 0038.scaffold00149 434374 3 ... GAA scaffold11 ScafM INDEL 0038.scaffold00149 434375 3 ... ATT scaffold11 Both SNP 0038.scaffold00149 434443 1 T C scaffold11 ScafM SNP 0038.scaffold00149 434515 1 G C scaffold11 ScafM SNP 0038.scaffold00149 434529 1 T A scaffold11 ScafM SNP 0038.scaffold00149 434563 1 C T scaffold11 ScafM SNP 0038.scaffold00149 434924 1 G A scaffold11 ScafM SNP 0038.scaffold00149 434931 1 G C scaffold11 ScafM INDEL 0038.scaffold00149 435070 2 TA .. scaffold11 ScafM INDEL 0038.scaffold00149 435083 2 TA .. scaffold11 ScafM SNP 0038.scaffold00149 435117 1 T C scaffold11 ScafM SNP 0038.scaffold00149 435133 1 T C scaffold11 ScafM SNP 0038.scaffold00149 435145 1 C G scaffold11 ScafM SNP 0038.scaffold00149 435180 1 A G scaffold11 ScafM SNP 0038.scaffold00149 435196 1 T C scaffold11 ScafM SNP 0038.scaffold00149 435208 1 G T scaffold11 ScafM SNP 0038.scaffold00149 435249 1 G T scaffold11 Both SNP 0038.scaffold00149 435371 1 C A scaffold11 ScafM INDEL 0038.scaffold00149 435498 12 ATGTTTCTGAAT ............ scaffold11 ScafM SNP 0038.scaffold00149 435525 1 A G scaffold11 Both SNP 0038.scaffold00149 435568 1 G T scaffold11 Both SNP 0038.scaffold00149 435710 1 A G scaffold11 Both SNP 0038.scaffold00149 435722 1 G A scaffold11 Both SNP 0038.scaffold00149 435726 1 A C scaffold11 Both SNP 0038.scaffold00149 435866 1 G C scaffold11 Both SNP 0038.scaffold00149 435907 1 G A scaffold11 Both SNP 0038.scaffold00149 435944 1 A G scaffold11 Both SNP 0038.scaffold00149 435964 1 C T scaffold11 Both SNP 0038.scaffold00149 435970 1 A G scaffold11 Both SNP 0038.scaffold00149 436015 1 G C scaffold11 Both SNP 0038.scaffold00149 436190 1 T C scaffold11 ScafM SNP 0038.scaffold00149 436348 1 C T scaffold11 ScafM SNP 0038.scaffold00149 436405 2 GT AC scaffold11 ScafM SNP 0038.scaffold00149 436622 1 T A scaffold11 ScafM SNP 0038.scaffold00149 436636 1 C G scaffold11 ScafM SNP 0038.scaffold00149 436651 1 C T scaffold11 ScafM SNP 0038.scaffold00149 436664 1 G C scaffold11 ScafM INDEL 0038.scaffold00149 436677 23 CGAGTTGATCTACAAGGGAGGAA ....................... scaffold11 ScafM INDEL 0038.scaffold00149 436704 22 TGTGGATTGTTCCGGTACTTCT ...................... scaffold11 ScafM INDEL 0038.scaffold00149 436728 10 AAGCCTTGCA .......... scaffold11 ScafM INDEL 0038.scaffold00149 436742 19 TATTGAAAAAATGCCTGAG ................... scaffold11 ScafM INDEL 0038.scaffold00149 436764 5 TATCT ..... scaffold11 ScafM SNP 0038.scaffold00149 436785 1 G A scaffold11 ScafM INDEL 0038.scaffold00149 436788 1 . C scaffold11 ScafM SNP 0038.scaffold00149 436834 1 A C scaffold11 ScafM SNP 0038.scaffold00149 436876 1 T G scaffold11 ScafM SNP 0038.scaffold00149 437008 2 AG GT scaffold11 ScafM SNP 0038.scaffold00149 442898 1 T A scaffold18373 ScafM SNP 0038.scaffold00149 442932 1 G A scaffold18373 ScafM SNP 0038.scaffold00149 442943 1 C T scaffold18373 ScafM SNP 0038.scaffold00149 442948 1 C T scaffold18373 ScafM SNP 0038.scaffold00149 442965 1 G A scaffold18373 ScafM SNP 0038.scaffold00149 442969 1 G T scaffold18373 ScafM INDEL 0038.scaffold00149 442983 2 AA .. scaffold18373 ScafM SNP 0038.scaffold00149 443006 1 G C scaffold18373 ScafM SNP 0038.scaffold00149 443017 1 A G scaffold18373 ScafM SNP 0038.scaffold00149 443039 1 T C scaffold18373 ScafM SNP 0038.scaffold00149 443069 2 AC TT scaffold18373 ScafM SNP 0038.scaffold00149 443078 1 A G scaffold18373 ScafM SNP 0038.scaffold00149 443085 1 G A scaffold18373 ScafM SNP 0038.scaffold00149 443112 1 A G scaffold18373 ScafM INDEL 0038.scaffold00149 443132 1 T . scaffold18373 ScafM SNP 0038.scaffold00149 443140 1 A C scaffold18373 ScafM SNP 0038.scaffold00149 443152 1 C A scaffold18373 ScafM SNP 0038.scaffold00149 443172 1 A G scaffold18373 ScafM SNP 0038.scaffold00149 443190 1 T C scaffold18373 ScafM INDEL 0038.scaffold00149 443240 2 AT .. scaffold18373 ScafM SNP 0038.scaffold00149 443251 1 C T scaffold18373 ScafM INDEL 0038.scaffold00149 443276 5 ..... TTTAA scaffold18373 ScafM INDEL 0038.scaffold00149 443294 1 . G scaffold18373 ScafM INDEL 0038.scaffold00149 443295 3 ... TTT scaffold18373 ScafM SNP 0038.scaffold00149 443313 1 G A scaffold18373 ScafM SNP 0038.scaffold00149 443542 1 G A scaffold20930 ScafM SNP 0038.scaffold00149 443552 1 G A scaffold20930 ScafM SNP 0038.scaffold00149 443586 1 A G scaffold20930 ScafM SNP 0038.scaffold00149 443591 1 G A scaffold20930 ScafM SNP 0038.scaffold00149 443711 1 T C scaffold20930 ScafM SNP 0038.scaffold00149 443723 1 G T scaffold20930 ScafM SNP 0038.scaffold00149 443729 1 G T scaffold20930 ScafM SNP 0038.scaffold00149 443783 1 C T scaffold20930 ScafM SNP 0038.scaffold00149 443792 1 T G scaffold20930 ScafM SNP 0038.scaffold00149 443797 1 G A scaffold20930 ScafM INDEL 0038.scaffold00149 443807 1 A . scaffold20930 ScafM INDEL 0038.scaffold00149 443877 3 TGT ... scaffold20930 ScafM INDEL 0038.scaffold00149 443887 1 C . scaffold20930 ScafM SNP 0038.scaffold00149 443922 1 G A scaffold20930 ScafM SNP 0038.scaffold00149 443936 1 C T scaffold20930 ScafM INDEL 0038.scaffold00149 444065 1 . G scaffold31656 ScafM INDEL 0038.scaffold00149 444068 1 . G scaffold31656 ScafM SNP 0038.scaffold00149 444072 1 A C scaffold31656 ScafM SNP 0038.scaffold00149 444074 1 T G scaffold31656 ScafM SNP 0038.scaffold00149 444076 1 T A scaffold31656 ScafM SNP 0038.scaffold00149 444081 1 C G scaffold31656 ScafM SNP 0038.scaffold00149 444091 1 C T scaffold31656 ScafM SNP 0038.scaffold00149 444093 2 TC GG scaffold31656 ScafM SNP 0038.scaffold00149 444098 1 G T scaffold31656 ScafM INDEL 0038.scaffold00149 444101 2 GG .A scaffold31656 ScafM SNP 0038.scaffold00149 444107 1 A G scaffold31656 ScafM SNP 0038.scaffold00149 444117 1 T A scaffold31656 ScafM SNP 0038.scaffold00149 444119 1 G T scaffold31656 ScafM SNP 0038.scaffold00149 444133 2 GT TG scaffold31656 ScafM SNP 0038.scaffold00149 444137 2 AA GG scaffold31656 ScafM SNP 0038.scaffold00149 444146 1 A G scaffold31656 ScafM SNP 0038.scaffold00149 445479 1 A C scaffold13439 ScafM SNP 0038.scaffold00149 445554 1 C T scaffold13439 ScafM SNP 0038.scaffold00149 460711 1 T G scaffold2100 ScafM SNP 0038.scaffold00149 460741 1 A G scaffold2100 ScafM SNP 0038.scaffold00149 460745 1 A G scaffold2100 ScafM SNP 0038.scaffold00149 460790 1 A G scaffold2100 ScafM SNP 0038.scaffold00149 460797 1 G A scaffold2100 ScafM SNP 0038.scaffold00149 460806 1 A G scaffold2100 ScafM SNP 0038.scaffold00149 460809 1 G A scaffold2100 ScafM SNP 0038.scaffold00149 460825 1 T G scaffold2100 ScafM SNP 0038.scaffold00149 460841 1 T G scaffold2100 ScafM SNP 0038.scaffold00149 460845 1 G A scaffold2100 ScafM SNP 0038.scaffold00149 467404 1 G C scaffold12406 ScafM SNP 0038.scaffold00149 467407 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467412 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 467415 1 A C scaffold12406 ScafM SNP 0038.scaffold00149 467419 1 A C scaffold12406 ScafM SNP 0038.scaffold00149 467423 1 G A scaffold12406 ScafM SNP 0038.scaffold00149 467427 2 TG CA scaffold12406 ScafM SNP 0038.scaffold00149 467430 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 467433 1 G A scaffold12406 ScafM SNP 0038.scaffold00149 467445 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 467449 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 467516 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467534 2 GT AC scaffold12406 ScafM SNP 0038.scaffold00149 467551 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 467569 1 G A scaffold12406 ScafM SNP 0038.scaffold00149 467573 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 467597 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 467614 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467629 1 T A scaffold12406 ScafM SNP 0038.scaffold00149 467700 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467705 2 AA GC scaffold12406 ScafM SNP 0038.scaffold00149 467711 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 467721 1 A G scaffold12406 ScafM INDEL 0038.scaffold00149 467774 1 T . scaffold12406 ScafM SNP 0038.scaffold00149 467778 1 A T scaffold12406 ScafM SNP 0038.scaffold00149 467782 1 T A scaffold12406 ScafM INDEL 0038.scaffold00149 467804 2 CT .. scaffold12406 ScafM INDEL 0038.scaffold00149 467847 2 GT .A scaffold12406 ScafM SNP 0038.scaffold00149 467851 1 A C scaffold12406 ScafM SNP 0038.scaffold00149 467853 1 A C scaffold12406 ScafM SNP 0038.scaffold00149 467856 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467861 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 467871 2 TT CC scaffold12406 ScafM SNP 0038.scaffold00149 467910 1 G A scaffold12406 ScafM INDEL 0038.scaffold00149 467957 1 . A scaffold12406 ScafM SNP 0038.scaffold00149 467964 1 G T scaffold12406 ScafM SNP 0038.scaffold00149 467994 1 T C scaffold12406 ScafM INDEL 0038.scaffold00149 468015 1 T . scaffold12406 ScafM SNP 0038.scaffold00149 468030 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 468033 1 A C scaffold12406 ScafM SNP 0038.scaffold00149 468057 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468101 1 G A scaffold12406 ScafM SNP 0038.scaffold00149 468124 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468147 1 A G scaffold12406 ScafM SNP 0038.scaffold00149 468170 1 G A scaffold12406 ScafM SNP 0038.scaffold00149 468187 1 G A scaffold12406 ScafM INDEL 0038.scaffold00149 468205 1 A . scaffold12406 ScafM SNP 0038.scaffold00149 468272 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 468276 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468278 1 T A scaffold12406 ScafM SNP 0038.scaffold00149 468282 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468286 1 C G scaffold12406 ScafM SNP 0038.scaffold00149 468295 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468301 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468306 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 468318 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 468336 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 468349 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 468351 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468367 1 T C scaffold12406 ScafM INDEL 0038.scaffold00149 468370 1 T . scaffold12406 ScafM SNP 0038.scaffold00149 468372 2 GT CC scaffold12406 ScafM SNP 0038.scaffold00149 468386 1 T G scaffold12406 ScafM SNP 0038.scaffold00149 468391 1 C A scaffold12406 ScafM SNP 0038.scaffold00149 468393 1 C A scaffold12406 ScafM INDEL 0038.scaffold00149 468394 1 . T scaffold12406 ScafM SNP 0038.scaffold00149 468398 1 A G scaffold12406 ScafM INDEL 0038.scaffold00149 468400 1 G . scaffold12406 ScafM INDEL 0038.scaffold00149 468406 2 .. AA scaffold12406 ScafM SNP 0038.scaffold00149 468409 1 T A scaffold12406 ScafM SNP 0038.scaffold00149 468411 1 A C scaffold12406 ScafM INDEL 0038.scaffold00149 468413 3 ... CCC scaffold12406 ScafM SNP 0038.scaffold00149 468416 1 T C scaffold12406 ScafM SNP 0038.scaffold00149 468419 1 T C scaffold12406 ScafM INDEL 0038.scaffold00149 468429 3 ... CCT scaffold12406 ScafM SNP 0038.scaffold00149 468434 1 A T scaffold12406 ScafM SNP 0038.scaffold00149 468438 1 G T scaffold12406 ScafM SNP 0038.scaffold00149 468441 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468449 2 GA AC scaffold12406 ScafM INDEL 0038.scaffold00149 468457 3 AAT ... scaffold12406 ScafM INDEL 0038.scaffold00149 468490 1 . T scaffold12406 ScafM INDEL 0038.scaffold00149 468495 1 G . scaffold12406 ScafM INDEL 0038.scaffold00149 468499 4 AGCT .... scaffold12406 ScafM INDEL 0038.scaffold00149 468510 1 . G scaffold12406 ScafM SNP 0038.scaffold00149 468517 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 468528 1 A T scaffold12406 ScafM SNP 0038.scaffold00149 468537 1 G T scaffold12406 ScafM SNP 0038.scaffold00149 468539 1 T C scaffold12406 ScafM INDEL 0038.scaffold00149 468552 2 TC .. scaffold12406 ScafM SNP 0038.scaffold00149 468562 1 C T scaffold12406 ScafM SNP 0038.scaffold00149 476930 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 476937 1 T C scaffold4200 ScafM INDEL 0038.scaffold00149 476944 1 T . scaffold4200 ScafM SNP 0038.scaffold00149 476950 1 T A scaffold4200 ScafM SNP 0038.scaffold00149 476989 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 476995 1 A C scaffold4200 ScafM SNP 0038.scaffold00149 477010 2 CT TA scaffold4200 ScafM SNP 0038.scaffold00149 477025 2 AC GA scaffold4200 ScafM SNP 0038.scaffold00149 477037 1 A T scaffold4200 ScafM SNP 0038.scaffold00149 477042 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477051 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477087 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477089 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 477109 2 AT TG scaffold4200 ScafM SNP 0038.scaffold00149 477149 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477160 1 G T scaffold4200 ScafM SNP 0038.scaffold00149 477166 1 A C scaffold4200 ScafM SNP 0038.scaffold00149 477179 1 A C scaffold4200 ScafM SNP 0038.scaffold00149 477259 1 G A scaffold4200 ScafM SNP 0038.scaffold00149 477261 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477275 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 477280 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477322 1 A C scaffold4200 ScafM SNP 0038.scaffold00149 477333 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477396 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477417 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 477437 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477464 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 477478 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 477516 1 G A scaffold4200 ScafM SNP 0038.scaffold00149 477559 1 A G scaffold4200 ScafM INDEL 0038.scaffold00149 477606 1 C . scaffold4200 ScafM SNP 0038.scaffold00149 477614 1 T A scaffold4200 ScafM SNP 0038.scaffold00149 477631 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477665 1 A T scaffold4200 ScafM SNP 0038.scaffold00149 477703 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477718 1 G C scaffold4200 ScafM SNP 0038.scaffold00149 477735 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477741 1 G A scaffold4200 ScafM SNP 0038.scaffold00149 477745 1 G C scaffold4200 ScafM SNP 0038.scaffold00149 477751 1 A C scaffold4200 ScafM SNP 0038.scaffold00149 477772 1 T G scaffold4200 ScafM SNP 0038.scaffold00149 477854 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477896 1 T C scaffold4200 ScafM SNP 0038.scaffold00149 477932 1 T A scaffold4200 ScafM SNP 0038.scaffold00149 477976 1 C A scaffold4200 ScafM SNP 0038.scaffold00149 477997 2 TT GC scaffold4200 ScafM SNP 0038.scaffold00149 478013 1 C A scaffold4200 ScafM SNP 0038.scaffold00149 478068 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 478079 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 478095 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 478216 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 478228 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 478268 1 A T scaffold4200 ScafM SNP 0038.scaffold00149 478315 1 A G scaffold4200 ScafM SNP 0038.scaffold00149 478361 1 C T scaffold4200 ScafM SNP 0038.scaffold00149 478367 1 C T scaffold4200 ReadM SNP 0038.scaffold00149 479289 1 T G - ReadM SNP 0038.scaffold00149 479308 1 T A - ScafM SNP 0038.scaffold00149 481124 1 A T scaffold15677 ScafM SNP 0038.scaffold00149 481126 1 G T scaffold15677 ScafM SNP 0038.scaffold00149 481144 1 T C scaffold15677 ScafM SNP 0038.scaffold00149 481152 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 481204 1 T C scaffold15677 ScafM SNP 0038.scaffold00149 481224 1 T G scaffold15677 ScafM SNP 0038.scaffold00149 481249 1 A T scaffold15677 ScafM SNP 0038.scaffold00149 481273 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481302 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481334 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481356 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481376 1 T A scaffold15677 ScafM SNP 0038.scaffold00149 481403 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 481432 1 A C scaffold15677 ScafM INDEL 0038.scaffold00149 481435 1 T . scaffold15677 ScafM SNP 0038.scaffold00149 481439 1 G A scaffold15677 ScafM SNP 0038.scaffold00149 481451 2 GC AT scaffold15677 ScafM SNP 0038.scaffold00149 481494 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 481519 1 C G scaffold15677 ScafM SNP 0038.scaffold00149 481522 1 G A scaffold15677 ScafM SNP 0038.scaffold00149 481553 1 A C scaffold15677 ScafM SNP 0038.scaffold00149 481573 1 T C scaffold15677 ScafM SNP 0038.scaffold00149 481597 1 C A scaffold15677 ScafM SNP 0038.scaffold00149 481600 1 C T scaffold15677 ScafM INDEL 0038.scaffold00149 481606 1 T . scaffold15677 ScafM SNP 0038.scaffold00149 481614 1 C A scaffold15677 ScafM SNP 0038.scaffold00149 481824 1 A T scaffold15677 ScafM SNP 0038.scaffold00149 481847 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481898 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 481911 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 481947 1 G A scaffold15677 ScafM SNP 0038.scaffold00149 481971 1 A G scaffold15677 ScafM INDEL 0038.scaffold00149 482051 1 T . scaffold15677 ScafM SNP 0038.scaffold00149 482053 3 TTT AAA scaffold15677 ScafM SNP 0038.scaffold00149 482170 1 A T scaffold15677 ScafM SNP 0038.scaffold00149 482182 1 G A scaffold15677 ScafM SNP 0038.scaffold00149 482215 1 T A scaffold15677 ScafM SNP 0038.scaffold00149 482250 1 T C scaffold15677 ScafM SNP 0038.scaffold00149 482260 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 482296 1 T G scaffold15677 ScafM SNP 0038.scaffold00149 482317 1 A C scaffold15677 ScafM SNP 0038.scaffold00149 482368 1 T A scaffold15677 ScafM SNP 0038.scaffold00149 482465 1 A G scaffold15677 ScafM SNP 0038.scaffold00149 482492 1 G T scaffold15677 ScafM SNP 0038.scaffold00149 482502 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 482530 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 482558 2 GT AC scaffold15677 ScafM SNP 0038.scaffold00149 482571 1 A C scaffold15677 ScafM SNP 0038.scaffold00149 482577 1 C A scaffold15677 ScafM SNP 0038.scaffold00149 482590 1 T C scaffold15677 ScafM SNP 0038.scaffold00149 482596 1 C T scaffold15677 ScafM SNP 0038.scaffold00149 482624 1 T A scaffold15677 ScafM SNP 0038.scaffold00149 482669 1 T A scaffold15677 ScafM SNP 0038.scaffold00149 482673 1 G T scaffold15677 ScafM SNP 0038.scaffold00149 487747 2 TA CC scaffold10247 ScafM SNP 0038.scaffold00149 487759 1 T C scaffold10247 ScafM SNP 0038.scaffold00149 487762 1 A C scaffold10247 ScafM SNP 0038.scaffold00149 487790 2 AA CT scaffold10247 ScafM SNP 0038.scaffold00149 487810 1 C T scaffold10247 ScafM SNP 0038.scaffold00149 487966 1 C T scaffold10247 ScafM SNP 0038.scaffold00149 487991 1 T C scaffold10247 ScafM SNP 0038.scaffold00149 488015 1 G A scaffold10247 ScafM SNP 0038.scaffold00149 488033 1 T C scaffold10247 ScafM SNP 0038.scaffold00149 488035 1 T G scaffold10247 ScafM SNP 0038.scaffold00149 488061 1 C G scaffold10247 ScafM SNP 0038.scaffold00149 488090 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488092 1 T G scaffold10247 ScafM SNP 0038.scaffold00149 488108 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488127 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488138 1 T G scaffold10247 ScafM SNP 0038.scaffold00149 488148 1 A T scaffold10247 ScafM SNP 0038.scaffold00149 488157 1 G A scaffold10247 ScafM INDEL 0038.scaffold00149 488171 1 . G scaffold10247 ScafM SNP 0038.scaffold00149 488176 1 T A scaffold10247 ScafM INDEL 0038.scaffold00149 488203 1 . T scaffold10247 ScafM SNP 0038.scaffold00149 488214 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488240 1 C T scaffold10247 ScafM SNP 0038.scaffold00149 488245 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488248 1 G A scaffold10247 ScafM SNP 0038.scaffold00149 488265 2 TG CA scaffold10247 ScafM SNP 0038.scaffold00149 488280 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488377 2 AA CG scaffold10247 ScafM SNP 0038.scaffold00149 488400 1 A C scaffold10247 ScafM SNP 0038.scaffold00149 488407 1 A G scaffold10247 ScafM SNP 0038.scaffold00149 488419 1 A C scaffold10247 ScafM SNP 0038.scaffold00149 488436 1 G C scaffold10247 ScafM SNP 0038.scaffold00149 488473 1 T A scaffold10247 ScafM SNP 0038.scaffold00149 488480 4 CCGA TTAG scaffold10247 ScafM SNP 0038.scaffold00149 488485 1 G A scaffold10247 ScafM SNP 0038.scaffold00149 488504 1 C T scaffold10247 ScafM SNP 0038.scaffold00149 492379 1 C T scaffold2055 ScafM INDEL 0038.scaffold00149 492382 1 T . scaffold2055 ScafM SNP 0038.scaffold00149 492388 1 A G scaffold2055 ScafM SNP 0038.scaffold00149 492390 1 C T scaffold2055 ScafM SNP 0038.scaffold00149 492400 1 T C scaffold2055 ScafM SNP 0038.scaffold00149 492415 1 T C scaffold2055 ScafM SNP 0038.scaffold00149 492418 4 AGAC CTCT scaffold2055 ScafM INDEL 0038.scaffold00149 492430 1 . T scaffold2055 ScafM SNP 0038.scaffold00149 492445 1 A T scaffold2055 ScafM SNP 0038.scaffold00149 492447 1 G C scaffold2055 ScafM INDEL 0038.scaffold00149 492449 1 A . scaffold2055 ScafM INDEL 0038.scaffold00149 492452 1 . G scaffold2055 ScafM SNP 0038.scaffold00149 492455 1 T G scaffold2055 ScafM SNP 0038.scaffold00149 492495 1 A T scaffold2055 ScafM SNP 0038.scaffold00149 492507 1 A G scaffold2055 Both SNP 0038.scaffold00149 503497 1 C T scaffold9966 ScafM INDEL 0038.scaffold00149 503684 3 ... CAT scaffold9966 ScafM SNP 0038.scaffold00149 503693 1 T G scaffold9966 ScafM INDEL 0038.scaffold00149 503710 2 CA .. scaffold9966 ScafM SNP 0038.scaffold00149 503755 1 C G scaffold9966 ScafM SNP 0038.scaffold00149 503760 1 C A scaffold9966 ScafM SNP 0038.scaffold00149 503783 1 C T scaffold9966 ScafM SNP 0038.scaffold00149 503792 1 A G scaffold9966 ScafM SNP 0038.scaffold00149 503810 1 G T scaffold9966 ScafM SNP 0038.scaffold00149 503818 1 T C scaffold9966 ScafM SNP 0038.scaffold00149 503854 1 A C scaffold9966 ScafM SNP 0038.scaffold00149 503871 1 G A scaffold9966 ScafM SNP 0038.scaffold00149 503873 1 G A scaffold9966 ScafM SNP 0038.scaffold00149 503904 1 C A scaffold9966 ScafM SNP 0038.scaffold00149 503939 1 G A scaffold9966 ScafM SNP 0038.scaffold00149 503946 1 G A scaffold9966 Both INDEL 0038.scaffold00149 504027 1 A . scaffold9966 ScafM INDEL 0038.scaffold00149 505683 2 .. AC scaffold8914 ScafM INDEL 0038.scaffold00149 505722 9 ......... TGAAAAGAT scaffold8914 ScafM INDEL 0038.scaffold00149 505723 2 .. AA scaffold8914 ScafM INDEL 0038.scaffold00149 505724 1 . A scaffold8914 ScafM SNP 0038.scaffold00149 505733 2 CA TG scaffold8914 ScafM SNP 0038.scaffold00149 505754 1 T A scaffold8914 ScafM INDEL 0038.scaffold00149 505755 1 . A scaffold8914 ScafM SNP 0038.scaffold00149 505764 1 C A scaffold8914 ScafM SNP 0038.scaffold00149 505768 2 AA GT scaffold8914 ScafM SNP 0038.scaffold00149 505774 1 A G scaffold8914 ScafM SNP 0038.scaffold00149 505796 2 TC GA scaffold8914 ScafM SNP 0038.scaffold00149 505805 1 G T scaffold8914 ScafM SNP 0038.scaffold00149 505830 1 T G scaffold8914 ScafM SNP 0038.scaffold00149 505841 2 GA CC scaffold8914 ScafM INDEL 0038.scaffold00149 505849 1 T . scaffold8914 ScafM SNP 0038.scaffold00149 505862 1 A G scaffold8914 ScafM SNP 0038.scaffold00149 505883 1 T G scaffold8914 ScafM SNP 0038.scaffold00149 505886 1 G T scaffold8914 ScafM SNP 0038.scaffold00149 505895 1 G C scaffold8914 ScafM SNP 0038.scaffold00149 505902 1 T G scaffold8914 ScafM INDEL 0038.scaffold00149 505903 4 .... ACGA scaffold8914 ScafM SNP 0038.scaffold00149 505909 1 T G scaffold8914 ScafM SNP 0038.scaffold00149 505931 1 G A scaffold8914 ScafM SNP 0038.scaffold00149 505940 1 C T scaffold8914 ScafM SNP 0038.scaffold00149 505946 2 GT AC scaffold8914 ScafM SNP 0038.scaffold00149 505954 1 A G scaffold8914 ScafM SNP 0038.scaffold00149 505968 1 C G scaffold8914 ScafM SNP 0038.scaffold00149 505978 1 C T scaffold8914 ScafM SNP 0038.scaffold00149 505980 1 A G scaffold8914 ScafM SNP 0038.scaffold00149 505984 2 CA TT scaffold8914 ScafM SNP 0038.scaffold00149 505990 1 A G scaffold8914 ScafM SNP 0038.scaffold00149 523875 1 C A scaffold8477 ScafM SNP 0038.scaffold00149 523881 1 C T scaffold8477 ScafM SNP 0038.scaffold00149 523884 1 T C scaffold8477 ScafM SNP 0038.scaffold00149 523891 1 A G scaffold8477 ScafM SNP 0038.scaffold00149 523915 1 A G scaffold8477 ScafM SNP 0038.scaffold00149 523918 1 G T scaffold8477 ScafM SNP 0038.scaffold00149 523921 1 G A scaffold8477 ScafM SNP 0038.scaffold00149 523924 1 T C scaffold8477 ScafM INDEL 0038.scaffold00149 523926 3 ... TCA scaffold8477 ScafM SNP 0038.scaffold00149 523928 1 G A scaffold8477 ScafM SNP 0038.scaffold00149 523937 1 T G scaffold8477 ScafM SNP 0038.scaffold00149 523939 1 T C scaffold8477 ScafM SNP 0038.scaffold00149 523944 1 C G scaffold8477 ScafM SNP 0038.scaffold00149 523949 1 C A scaffold8477 ScafM SNP 0038.scaffold00149 523953 2 AC TT scaffold8477 ScafM SNP 0038.scaffold00149 523962 1 C T scaffold8477 ScafM SNP 0038.scaffold00149 523968 1 T G scaffold8477 ScafM SNP 0038.scaffold00149 561260 1 A C scaffold6200 ScafM SNP 0038.scaffold00149 561294 1 A G scaffold6200 ScafM SNP 0038.scaffold00149 561296 1 A G scaffold6200 ScafM SNP 0038.scaffold00149 561321 1 T C scaffold6200 ScafM SNP 0038.scaffold00149 561326 1 G A scaffold6200 ScafM SNP 0038.scaffold00149 566535 1 T C scaffold10106 ScafM SNP 0038.scaffold00149 566549 1 G T scaffold10106 ScafM SNP 0038.scaffold00149 566551 1 G T scaffold10106 ScafM SNP 0038.scaffold00149 566555 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 566587 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 566591 1 C T scaffold10106 ScafM SNP 0038.scaffold00149 566604 1 T G scaffold10106 ScafM SNP 0038.scaffold00149 566621 2 TT CA scaffold10106 ScafM INDEL 0038.scaffold00149 566639 3 ... TTC scaffold10106 ScafM SNP 0038.scaffold00149 566642 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 566669 1 T A scaffold10106 ScafM SNP 0038.scaffold00149 566672 1 C T scaffold10106 ScafM INDEL 0038.scaffold00149 566686 2 CG .. scaffold10106 ScafM SNP 0038.scaffold00149 566689 1 T A scaffold10106 ScafM SNP 0038.scaffold00149 566695 1 A T scaffold10106 ScafM SNP 0038.scaffold00149 566703 1 C T scaffold10106 ScafM INDEL 0038.scaffold00149 566715 3 CTA ... scaffold10106 ScafM INDEL 0038.scaffold00149 566719 2 GG .. scaffold10106 ScafM INDEL 0038.scaffold00149 566729 4 AAAA ...T scaffold10106 ScafM SNP 0038.scaffold00149 566739 1 A C scaffold10106 ScafM INDEL 0038.scaffold00149 566762 2 GA .. scaffold10106 ScafM INDEL 0038.scaffold00149 566766 1 G . scaffold10106 ScafM INDEL 0038.scaffold00149 566769 15 TCGCATTCATCGAAT ............... scaffold10106 ScafM SNP 0038.scaffold00149 566789 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 566793 1 T A scaffold10106 ScafM INDEL 0038.scaffold00149 566798 2 AG .. scaffold10106 ScafM SNP 0038.scaffold00149 566812 1 C T scaffold10106 ScafM SNP 0038.scaffold00149 566819 1 T C scaffold10106 ScafM SNP 0038.scaffold00149 566827 1 T A scaffold10106 ScafM INDEL 0038.scaffold00149 566845 3 ... CAA scaffold10106 ScafM INDEL 0038.scaffold00149 566846 4 .... AAAA scaffold10106 ScafM INDEL 0038.scaffold00149 566849 1 . A scaffold10106 ScafM SNP 0038.scaffold00149 566869 1 G T scaffold10106 ScafM SNP 0038.scaffold00149 566872 1 C T scaffold10106 ScafM SNP 0038.scaffold00149 566887 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 566889 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 566892 2 TG CA scaffold10106 ScafM SNP 0038.scaffold00149 566911 1 A C scaffold10106 ScafM INDEL 0038.scaffold00149 566917 1 G . scaffold10106 ScafM SNP 0038.scaffold00149 566944 1 A G scaffold10106 ScafM INDEL 0038.scaffold00149 566955 7 GAAGAGA ....... scaffold10106 ScafM INDEL 0038.scaffold00149 566964 3 CGA ... scaffold10106 ScafM SNP 0038.scaffold00149 566968 1 G T scaffold10106 ScafM SNP 0038.scaffold00149 566972 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567004 1 T C scaffold10106 ScafM INDEL 0038.scaffold00149 567011 1 G . scaffold10106 ScafM SNP 0038.scaffold00149 567014 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567019 1 T C scaffold10106 ScafM SNP 0038.scaffold00149 567026 1 T A scaffold10106 ScafM SNP 0038.scaffold00149 567028 2 CG TA scaffold10106 ScafM SNP 0038.scaffold00149 567042 2 CA AG scaffold10106 ScafM SNP 0038.scaffold00149 567050 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567053 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567059 1 C A scaffold10106 ScafM SNP 0038.scaffold00149 567064 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567076 1 C T scaffold10106 ScafM SNP 0038.scaffold00149 567090 1 C A scaffold10106 ScafM SNP 0038.scaffold00149 567097 2 TT CG scaffold10106 ScafM SNP 0038.scaffold00149 567107 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567112 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567117 1 G T scaffold10106 ScafM SNP 0038.scaffold00149 567126 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567130 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567138 1 T G scaffold10106 ScafM SNP 0038.scaffold00149 567147 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567162 1 C T scaffold10106 ScafM SNP 0038.scaffold00149 567174 3 GTG ACA scaffold10106 ScafM SNP 0038.scaffold00149 567180 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567184 1 A G scaffold10106 ScafM SNP 0038.scaffold00149 567186 2 CA GG scaffold10106 ScafM SNP 0038.scaffold00149 567196 1 T G scaffold10106 ScafM SNP 0038.scaffold00149 567202 1 G A scaffold10106 ScafM SNP 0038.scaffold00149 567204 1 G T scaffold10106 ReadM SNP 0038.scaffold00149 599507 1 G A - ReadM SNP 0038.scaffold00149 599609 1 A G - ReadM SNP 0038.scaffold00149 599776 1 C T - ReadM SNP 0038.scaffold00149 600034 1 G A - ReadM SNP 0038.scaffold00149 600071 1 T C - ReadM SNP 0038.scaffold00149 600222 1 C T - ReadM SNP 0038.scaffold00149 600289 1 A T - ReadM SNP 0038.scaffold00149 600581 1 T C - ReadM SNP 0038.scaffold00149 600593 1 T C - ReadM SNP 0038.scaffold00149 600626 1 A G - ReadM SNP 0038.scaffold00149 600735 1 C A - ReadM SNP 0038.scaffold00149 600765 1 T G - ScafM SNP 0038.scaffold00149 601505 1 T C scaffold11102 ScafM SNP 0038.scaffold00149 601541 1 A C scaffold11102 ScafM SNP 0038.scaffold00149 601564 1 A T scaffold11102 ScafM SNP 0038.scaffold00149 601573 1 C T scaffold11102 ScafM SNP 0038.scaffold00149 601575 1 A G scaffold11102 ScafM SNP 0038.scaffold00149 601577 2 CC GT scaffold11102 ReadM SNP 0038.scaffold00149 602501 1 A G - ReadM SNP 0038.scaffold00149 602508 1 G C - ScafM SNP 0038.scaffold00149 636264 1 T A scaffold11 ScafM SNP 0038.scaffold00149 636302 1 T C scaffold11 ScafM SNP 0038.scaffold00149 636686 1 G A scaffold11 ScafM SNP 0038.scaffold00149 636859 1 A T scaffold11 ScafM SNP 0038.scaffold00149 636885 1 T A scaffold11 ScafM INDEL 0038.scaffold00149 636900 4 .... TTTA scaffold11 ScafM SNP 0038.scaffold00149 637194 1 A G scaffold11 ScafM SNP 0038.scaffold00149 637202 1 T A scaffold11 ScafM SNP 0038.scaffold00149 637217 1 C G scaffold11 ScafM SNP 0038.scaffold00149 637230 1 T C scaffold11 ScafM SNP 0038.scaffold00149 637253 1 A G scaffold11 ScafM SNP 0038.scaffold00149 637412 1 T C scaffold13123 ScafM SNP 0038.scaffold00149 637444 1 T G scaffold13123 ScafM SNP 0038.scaffold00149 637456 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637463 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637485 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637492 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637541 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637555 1 C G scaffold13123 ScafM SNP 0038.scaffold00149 637570 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 637574 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 637587 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 637589 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 637595 1 T A scaffold13123 ScafM SNP 0038.scaffold00149 637701 1 T G scaffold13123 ScafM SNP 0038.scaffold00149 637726 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 637864 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 637871 1 A T scaffold13123 ScafM SNP 0038.scaffold00149 637937 1 T C scaffold13123 ScafM INDEL 0038.scaffold00149 637980 2 .. TT scaffold13123 ScafM SNP 0038.scaffold00149 638001 1 T C scaffold13123 ScafM SNP 0038.scaffold00149 638101 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 638162 1 C G scaffold13123 ScafM SNP 0038.scaffold00149 638183 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 638494 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 638526 1 T C scaffold13123 ScafM SNP 0038.scaffold00149 638541 1 A G scaffold13123 Both SNP 0038.scaffold00149 638595 1 C T scaffold13123 Both SNP 0038.scaffold00149 638678 1 G A scaffold13123 Both SNP 0038.scaffold00149 638768 1 A T scaffold13123 Both SNP 0038.scaffold00149 638997 1 C T scaffold13123 Both SNP 0038.scaffold00149 639141 1 C T scaffold13123 Both SNP 0038.scaffold00149 639250 1 T C scaffold13123 Both SNP 0038.scaffold00149 639322 1 T C scaffold13123 Both SNP 0038.scaffold00149 639372 1 G T scaffold13123 ScafM INDEL 0038.scaffold00149 639588 1 . T scaffold13123 ScafM SNP 0038.scaffold00149 639626 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 639630 1 G T scaffold13123 ScafM INDEL 0038.scaffold00149 639636 1 . A scaffold13123 Both SNP 0038.scaffold00149 639713 1 A T scaffold13123 Both SNP 0038.scaffold00149 639788 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 639806 1 A T scaffold13123 ScafM INDEL 0038.scaffold00149 639859 1 . A scaffold13123 ScafM SNP 0038.scaffold00149 639861 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 639873 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 639925 1 T A scaffold13123 ScafM SNP 0038.scaffold00149 639974 1 C A scaffold13123 ScafM SNP 0038.scaffold00149 639979 1 T A scaffold13123 ScafM SNP 0038.scaffold00149 640005 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 640027 1 A G scaffold13123 Both SNP 0038.scaffold00149 640335 1 C A scaffold13123 ScafM SNP 0038.scaffold00149 640432 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 640456 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 640473 2 GG AT scaffold13123 ScafM SNP 0038.scaffold00149 640499 1 A G scaffold13123 ScafM SNP 0038.scaffold00149 640601 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 640621 1 A G scaffold13123 Both INDEL 0038.scaffold00149 640688 1 A . scaffold13123 ScafM SNP 0038.scaffold00149 640720 1 C T scaffold13123 ScafM SNP 0038.scaffold00149 640759 1 G A scaffold13123 ScafM SNP 0038.scaffold00149 640794 1 C T scaffold13123 ScafM INDEL 0038.scaffold00149 640801 9 AGCTGGTTG ......... scaffold13123 ReadM SNP 0038.scaffold00149 641388 1 T A - ReadM SNP 0038.scaffold00149 641506 1 G A - Both SNP 0038.scaffold00149 641527 1 A T scaffold13123 Both SNP 0038.scaffold00149 641544 1 G A scaffold13123 Both INDEL 0038.scaffold00149 641608 1 C . scaffold13123 Both SNP 0038.scaffold00149 641617 1 T C scaffold13123 Both SNP 0038.scaffold00149 641642 1 C T scaffold13123 ScafM INDEL 0038.scaffold00149 642762 1 A . scaffold10013 ScafM SNP 0038.scaffold00149 642780 1 G C scaffold10013 Both SNP 0038.scaffold00149 642810 1 C T scaffold10013 Both SNP 0038.scaffold00149 642928 1 A T scaffold10013 Both SNP 0038.scaffold00149 642971 1 C T scaffold10013 Both INDEL 0038.scaffold00149 642997 1 A . scaffold10013 Both SNP 0038.scaffold00149 643044 1 T C scaffold10013 ReadM SNP 0038.scaffold00149 643212 1 C A - ReadM SNP 0038.scaffold00149 643241 1 T A - ReadM INDEL 0038.scaffold00149 643550 1 T . - ReadM SNP 0038.scaffold00149 643858 1 C A - ReadM SNP 0038.scaffold00149 643922 1 G T - ReadM SNP 0038.scaffold00149 643942 1 T C - ReadM SNP 0038.scaffold00149 644019 1 G A - ReadM SNP 0038.scaffold00149 644159 1 A G - ReadM SNP 0038.scaffold00149 644213 1 T C - ReadM SNP 0038.scaffold00149 644231 1 G C - ReadM SNP 0038.scaffold00149 644270 1 C T - ReadM SNP 0038.scaffold00149 644322 1 T C - ReadM SNP 0038.scaffold00149 644375 1 T A - Both SNP 0038.scaffold00149 644689 1 G A scaffold10013 ScafM INDEL 0038.scaffold00149 644767 3 ..C TTT scaffold10013 ScafM SNP 0038.scaffold00149 644790 1 C A scaffold10013 ScafM SNP 0038.scaffold00149 644830 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 644863 1 G C scaffold10013 Both SNP 0038.scaffold00149 644888 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 644950 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 645135 1 G C scaffold10013 ScafM INDEL 0038.scaffold00149 645164 18 CCGTCACCGTCACCGTCA .................. scaffold10013 Both SNP 0038.scaffold00149 645189 1 T C scaffold10013 Both SNP 0038.scaffold00149 645226 1 C G scaffold10013 Both SNP 0038.scaffold00149 645320 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 645389 2 AT GG scaffold10013 Both SNP 0038.scaffold00149 645410 1 C T scaffold10013 Both SNP 0038.scaffold00149 645529 1 T C scaffold10013 Both SNP 0038.scaffold00149 645553 1 A G scaffold10013 ReadM SNP 0038.scaffold00149 645627 1 A T - ReadM SNP 0038.scaffold00149 645711 1 C G - ReadM SNP 0038.scaffold00149 645857 1 C A - ReadM SNP 0038.scaffold00149 645860 1 C A - ReadM SNP 0038.scaffold00149 645964 1 T A - ReadM SNP 0038.scaffold00149 645993 1 G A - ReadM INDEL 0038.scaffold00149 646036 1 . G - ReadM SNP 0038.scaffold00149 646053 1 A G - ReadM SNP 0038.scaffold00149 646126 1 T A - ReadM SNP 0038.scaffold00149 646144 1 G A - ReadM SNP 0038.scaffold00149 646169 1 G A - ScafM SNP 0038.scaffold00149 646221 1 G T scaffold10013 ScafM INDEL 0038.scaffold00149 646227 3 ... CCC scaffold10013 ScafM SNP 0038.scaffold00149 646263 1 C A scaffold10013 ScafM INDEL 0038.scaffold00149 646302 1 . G scaffold10013 ScafM INDEL 0038.scaffold00149 646305 3 ... ATG scaffold10013 Both SNP 0038.scaffold00149 646340 1 A G scaffold10013 ReadM SNP 0038.scaffold00149 646420 1 A G - ReadM SNP 0038.scaffold00149 646446 1 A G - ReadM SNP 0038.scaffold00149 646507 1 C T - ReadM SNP 0038.scaffold00149 646524 1 C G - ReadM SNP 0038.scaffold00149 646555 1 C T - ReadM SNP 0038.scaffold00149 646579 1 T A - ReadM SNP 0038.scaffold00149 646726 1 A T - ReadM SNP 0038.scaffold00149 646734 1 T C - ReadM SNP 0038.scaffold00149 646793 1 A G - ReadM SNP 0038.scaffold00149 646929 1 G A - ReadM SNP 0038.scaffold00149 647020 1 C T - ReadM SNP 0038.scaffold00149 647224 1 T C - ReadM SNP 0038.scaffold00149 647353 1 C A - ReadM SNP 0038.scaffold00149 647384 1 A C - ReadM SNP 0038.scaffold00149 647484 1 C T - ReadM SNP 0038.scaffold00149 647597 1 C G - ReadM SNP 0038.scaffold00149 647625 1 T G - ReadM SNP 0038.scaffold00149 647668 1 G A - ReadM SNP 0038.scaffold00149 647980 1 C T - ReadM SNP 0038.scaffold00149 648183 1 A T - ReadM SNP 0038.scaffold00149 648218 1 G A - ReadM SNP 0038.scaffold00149 648323 1 A T - ReadM SNP 0038.scaffold00149 648340 1 C T - ReadM SNP 0038.scaffold00149 648353 1 C A - ScafM SNP 0038.scaffold00149 648596 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 648645 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 648647 1 T A scaffold10013 Both SNP 0038.scaffold00149 648709 1 T A scaffold10013 Both SNP 0038.scaffold00149 648732 1 A G scaffold10013 ScafM INDEL 0038.scaffold00149 648759 3 ... TTT scaffold10013 Both SNP 0038.scaffold00149 648829 1 A C scaffold10013 Both SNP 0038.scaffold00149 648873 1 T G scaffold10013 Both SNP 0038.scaffold00149 648883 1 C A scaffold10013 ScafM INDEL 0038.scaffold00149 649015 2 .. TC scaffold10013 ScafM SNP 0038.scaffold00149 649028 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 649041 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 649059 1 T C scaffold10013 ScafM INDEL 0038.scaffold00149 649090 2 AA .. scaffold10013 ScafM SNP 0038.scaffold00149 649099 1 A T scaffold10013 ScafM INDEL 0038.scaffold00149 649146 3 ... AAA scaffold10013 Both SNP 0038.scaffold00149 649206 1 T C scaffold10013 Both INDEL 0038.scaffold00149 649276 2 AA .. scaffold10013 Both SNP 0038.scaffold00149 649331 1 G A scaffold10013 Both SNP 0038.scaffold00149 649340 1 A T scaffold10013 Both SNP 0038.scaffold00149 649443 1 T G scaffold10013 Both SNP 0038.scaffold00149 649494 1 C T scaffold10013 Both SNP 0038.scaffold00149 649528 1 A G scaffold10013 Both SNP 0038.scaffold00149 649532 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 649804 1 T A scaffold10013 ScafM INDEL 0038.scaffold00149 649808 4 TTTA .... scaffold10013 Both SNP 0038.scaffold00149 649988 1 A C scaffold10013 ReadM INDEL 0038.scaffold00149 650222 1 . T - Both SNP 0038.scaffold00149 650258 1 C T scaffold10013 ScafM INDEL 0038.scaffold00149 650323 74 .......................................................................... AACTCAATAATGTTGGTTCAATAAATATTAACCACATTAGAAAAAATATAAAAAATTAAAAATTGTTTAAAAAA scaffold10013 Both SNP 0038.scaffold00149 650380 1 T A scaffold10013 Both SNP 0038.scaffold00149 650484 1 G C scaffold10013 ScafM INDEL 0038.scaffold00149 650821 1 A . scaffold10013 ScafM SNP 0038.scaffold00149 650823 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 650844 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 652173 1 T C scaffold10013 ScafM INDEL 0038.scaffold00149 652203 7 ....... TGTCCGT scaffold10013 ScafM SNP 0038.scaffold00149 652286 2 TG CC scaffold10013 ScafM SNP 0038.scaffold00149 652293 1 C T scaffold10013 ReadM SNP 0038.scaffold00149 652678 1 C G - ReadM SNP 0038.scaffold00149 652745 1 A C - ReadM SNP 0038.scaffold00149 652847 1 A C - ReadM SNP 0038.scaffold00149 652931 1 A G - ReadM SNP 0038.scaffold00149 652956 1 T C - ReadM SNP 0038.scaffold00149 652981 1 C T - ReadM SNP 0038.scaffold00149 653075 1 A T - ReadM SNP 0038.scaffold00149 653133 1 C T - ReadM SNP 0038.scaffold00149 653150 1 T A - ReadM SNP 0038.scaffold00149 653152 1 T A - ReadM SNP 0038.scaffold00149 653197 1 A G - ReadM SNP 0038.scaffold00149 653235 1 C G - ReadM SNP 0038.scaffold00149 653304 1 G T - ReadM SNP 0038.scaffold00149 653361 2 CA GG - Both SNP 0038.scaffold00149 653523 1 T C scaffold10013 Both SNP 0038.scaffold00149 653632 1 C T scaffold10013 Both SNP 0038.scaffold00149 653656 1 C G scaffold10013 Both SNP 0038.scaffold00149 653669 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 653760 1 G A scaffold10013 Both SNP 0038.scaffold00149 653778 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 653855 1 A C scaffold10013 ScafM INDEL 0038.scaffold00149 653865 8 AATCCCAA ........ scaffold10013 ScafM SNP 0038.scaffold00149 653988 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 653999 1 C A scaffold10013 ScafM SNP 0038.scaffold00149 654055 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 654130 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 664015 1 T G scaffold1030 ScafM SNP 0038.scaffold00149 664084 1 A G scaffold1030 ScafM SNP 0038.scaffold00149 664139 1 G A scaffold1030 ScafM SNP 0038.scaffold00149 664150 1 G T scaffold1030 ReadM SNP 0038.scaffold00149 664264 1 C A - ScafM SNP 0038.scaffold00149 664832 1 G A scaffold1030 Both SNP 0038.scaffold00149 664844 1 T C scaffold1030 Both SNP 0038.scaffold00149 664884 1 T A scaffold1030 ScafM SNP 0038.scaffold00149 664987 1 A T scaffold1030 ReadM SNP 0038.scaffold00149 665117 1 T G - ReadM SNP 0038.scaffold00149 665355 1 T G - ReadM SNP 0038.scaffold00149 665843 1 T C - ReadM SNP 0038.scaffold00149 665898 1 G C - Both SNP 0038.scaffold00149 665971 1 C G scaffold1030 Both SNP 0038.scaffold00149 665977 1 A G scaffold1030 ScafM SNP 0038.scaffold00149 665988 1 A C scaffold1030 ScafM SNP 0038.scaffold00149 666007 1 G A scaffold1030 ScafM INDEL 0038.scaffold00149 666014 1 . A scaffold1030 ScafM SNP 0038.scaffold00149 666037 1 T A scaffold1030 ScafM SNP 0038.scaffold00149 666077 1 A G scaffold1030 ScafM SNP 0038.scaffold00149 666116 1 C A scaffold1030 Both SNP 0038.scaffold00149 666139 1 A C scaffold1030 ScafM SNP 0038.scaffold00149 666201 1 C T scaffold1030 ScafM SNP 0038.scaffold00149 666203 1 A G scaffold1030 ReadM SNP 0038.scaffold00149 667323 1 A G - ReadM SNP 0038.scaffold00149 667336 1 A G - ReadM SNP 0038.scaffold00149 667511 1 C T - ReadM SNP 0038.scaffold00149 667659 1 A G - ReadM SNP 0038.scaffold00149 667674 1 A G - ReadM SNP 0038.scaffold00149 668041 1 A G - ReadM SNP 0038.scaffold00149 668237 1 C T - Both SNP 0038.scaffold00149 668265 1 C G scaffold1030 Both SNP 0038.scaffold00149 668294 1 G A scaffold1030 Both SNP 0038.scaffold00149 668322 1 C T scaffold1030 Both SNP 0038.scaffold00149 668386 1 C T scaffold1030 Both SNP 0038.scaffold00149 668442 1 T G scaffold1030 ScafM SNP 0038.scaffold00149 668580 1 C T scaffold1030 ScafM INDEL 0038.scaffold00149 668594 2 .. TT scaffold1030 ScafM SNP 0038.scaffold00149 668613 1 G A scaffold1030 ScafM SNP 0038.scaffold00149 671162 1 A C scaffold2948 ScafM SNP 0038.scaffold00149 671164 1 G A scaffold2948 ScafM SNP 0038.scaffold00149 671180 2 TC CT scaffold2948 ScafM SNP 0038.scaffold00149 671195 1 C G scaffold2948 ScafM SNP 0038.scaffold00149 671224 1 G T scaffold2948 ScafM SNP 0038.scaffold00149 671241 1 C T scaffold2948 ScafM SNP 0038.scaffold00149 671243 1 G A scaffold2948 ReadM SNP 0038.scaffold00149 671695 1 T C - ReadM SNP 0038.scaffold00149 671846 1 G A - ReadM SNP 0038.scaffold00149 671917 1 C G - ReadM SNP 0038.scaffold00149 671967 1 G A - ReadM SNP 0038.scaffold00149 672009 1 T C - ReadM SNP 0038.scaffold00149 672095 1 A G - ReadM SNP 0038.scaffold00149 672152 1 C T - ReadM SNP 0038.scaffold00149 672164 1 T C - ReadM SNP 0038.scaffold00149 672345 1 C T - ReadM SNP 0038.scaffold00149 672356 1 C T - ReadM SNP 0038.scaffold00149 672725 1 C G - ReadM SNP 0038.scaffold00149 672977 1 A G - ReadM SNP 0038.scaffold00149 673016 1 C A - ScafM SNP 0038.scaffold00149 673043 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 673098 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 673117 1 A C scaffold10013 ReadM SNP 0038.scaffold00149 673419 1 A G - ScafM INDEL 0038.scaffold00149 680658 3 ACT ... scaffold14620 ScafM INDEL 0038.scaffold00149 680663 1 C . scaffold14620 ScafM INDEL 0038.scaffold00149 680666 3 TCT ... scaffold14620 ScafM SNP 0038.scaffold00149 680748 1 A G scaffold14620 ScafM SNP 0038.scaffold00149 681110 1 C T scaffold9862 ScafM SNP 0038.scaffold00149 681112 1 G A scaffold9862 ScafM SNP 0038.scaffold00149 681128 1 G A scaffold9862 ScafM SNP 0038.scaffold00149 681147 1 C A scaffold9862 ScafM INDEL 0038.scaffold00149 681181 1 T . scaffold9862 ScafM SNP 0038.scaffold00149 681206 1 A G scaffold9862 ScafM SNP 0038.scaffold00149 681266 1 G T scaffold9862 ReadM SNP 0038.scaffold00149 681309 1 G A - ReadM SNP 0038.scaffold00149 681710 1 T C - ReadM SNP 0038.scaffold00149 681770 1 A G - ReadM SNP 0038.scaffold00149 681800 1 C T - ReadM SNP 0038.scaffold00149 684566 1 T C - ReadM SNP 0038.scaffold00149 684697 1 A C - ReadM SNP 0038.scaffold00149 685288 1 C T - ReadM SNP 0038.scaffold00149 685322 1 A C - ReadM SNP 0038.scaffold00149 685426 1 T G - ReadM SNP 0038.scaffold00149 685515 1 T C - ReadM SNP 0038.scaffold00149 685588 1 C A - ReadM INDEL 0038.scaffold00149 685603 1 . G - ReadM SNP 0038.scaffold00149 685628 1 A C - ReadM SNP 0038.scaffold00149 685678 1 T G - ReadM SNP 0038.scaffold00149 685801 1 G A - ReadM SNP 0038.scaffold00149 685851 1 G A - ReadM SNP 0038.scaffold00149 685967 1 A G - ReadM SNP 0038.scaffold00149 686027 1 A G - ReadM SNP 0038.scaffold00149 686256 1 A C - ReadM SNP 0038.scaffold00149 686294 1 A C - ScafM SNP 0038.scaffold00149 687145 1 A G scaffold1032 ScafM SNP 0038.scaffold00149 687178 1 A G scaffold1032 ScafM SNP 0038.scaffold00149 687199 1 G A scaffold1032 ScafM SNP 0038.scaffold00149 687203 1 C T scaffold1032 ScafM SNP 0038.scaffold00149 687209 1 A G scaffold1032 ScafM SNP 0038.scaffold00149 687217 1 A G scaffold1032 ScafM SNP 0038.scaffold00149 687252 1 G A scaffold1032 ScafM SNP 0038.scaffold00149 687255 2 AC GT scaffold1032 ScafM SNP 0038.scaffold00149 687289 1 T G scaffold1032 ScafM SNP 0038.scaffold00149 687293 1 G T scaffold1032 ScafM SNP 0038.scaffold00149 687306 1 C T scaffold1032 ScafM SNP 0038.scaffold00149 687332 1 G C scaffold1032 ScafM SNP 0038.scaffold00149 687334 1 G C scaffold1032 ScafM SNP 0038.scaffold00149 687343 1 C T scaffold1032 ScafM SNP 0038.scaffold00149 687358 1 A T scaffold1032 ScafM INDEL 0038.scaffold00149 688433 2 TC .. scaffold10013 ScafM INDEL 0038.scaffold00149 688437 3 TCT ... scaffold10013 ScafM SNP 0038.scaffold00149 688464 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 688478 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688487 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688495 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 688507 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 688529 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688553 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 688567 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 688582 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 688631 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 688640 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 688651 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 688694 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 688700 1 A T scaffold10013 Both SNP 0038.scaffold00149 688717 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 688739 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 688744 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688750 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 688835 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 688849 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 688854 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688860 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 688876 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 689405 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 689439 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 700637 1 A C scaffold2350 ScafM SNP 0038.scaffold00149 700644 1 A T scaffold2350 ScafM SNP 0038.scaffold00149 700688 1 A C scaffold2350 ScafM SNP 0038.scaffold00149 700698 1 A C scaffold2350 ScafM SNP 0038.scaffold00149 700714 2 AA TC scaffold2350 ScafM SNP 0038.scaffold00149 719386 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 719394 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 719454 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 719461 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 719466 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 719472 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 719488 1 A T scaffold10013 ReadM SNP 0038.scaffold00149 719544 1 A G - ReadM SNP 0038.scaffold00149 719607 1 A T - ReadM SNP 0038.scaffold00149 719751 1 A G - ReadM INDEL 0038.scaffold00149 719756 1 G . - ReadM SNP 0038.scaffold00149 719763 1 A G - ReadM SNP 0038.scaffold00149 719853 1 C G - ReadM SNP 0038.scaffold00149 719871 1 A G - ReadM SNP 0038.scaffold00149 719899 1 G C - ReadM SNP 0038.scaffold00149 719947 1 G A - ReadM INDEL 0038.scaffold00149 719951 1 . T - ReadM SNP 0038.scaffold00149 720152 1 A G - ReadM SNP 0038.scaffold00149 720158 1 A G - ReadM SNP 0038.scaffold00149 720213 1 C A - ReadM SNP 0038.scaffold00149 720324 1 A C - ReadM SNP 0038.scaffold00149 720383 1 A G - Both SNP 0038.scaffold00149 720408 1 G T scaffold10013 ScafM INDEL 0038.scaffold00149 720447 2 AA .C scaffold10013 ScafM SNP 0038.scaffold00149 720450 1 T A scaffold10013 Both SNP 0038.scaffold00149 720519 1 A C scaffold10013 Both SNP 0038.scaffold00149 720609 1 G A scaffold10013 Both SNP 0038.scaffold00149 720620 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 720658 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 720687 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 720694 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 720699 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 720711 1 C T scaffold10013 ScafM INDEL 0038.scaffold00149 720717 1 . A scaffold10013 Both SNP 0038.scaffold00149 720794 1 G A scaffold10013 Both SNP 0038.scaffold00149 720834 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 720871 1 A C scaffold10013 ScafM INDEL 0038.scaffold00149 720910 6 GTTTGA ...... scaffold10013 ScafM SNP 0038.scaffold00149 720923 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 720950 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 720967 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 721179 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 721249 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 721277 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 721362 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 721625 1 T C scaffold5936 ScafM SNP 0038.scaffold00149 721640 1 C G scaffold5936 ScafM SNP 0038.scaffold00149 722333 1 G A scaffold10013 ScafM INDEL 0038.scaffold00149 722584 2 .. AA scaffold10013 ScafM SNP 0038.scaffold00149 722597 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 722649 1 T A scaffold10013 Both INDEL 0038.scaffold00149 722685 1 . C scaffold10013 Both SNP 0038.scaffold00149 722744 1 G A scaffold10013 Both SNP 0038.scaffold00149 722769 1 G C scaffold10013 Both SNP 0038.scaffold00149 722822 1 C G scaffold10013 Both SNP 0038.scaffold00149 722879 1 T C scaffold10013 Both INDEL 0038.scaffold00149 722889 1 T . scaffold10013 ReadM SNP 0038.scaffold00149 723071 1 G T - ReadM SNP 0038.scaffold00149 723127 1 T C - ReadM SNP 0038.scaffold00149 723160 1 T C - ReadM SNP 0038.scaffold00149 723176 1 T C - Both SNP 0038.scaffold00149 723222 1 T G scaffold10013 Both SNP 0038.scaffold00149 723261 1 A G scaffold10013 ReadM SNP 0038.scaffold00149 723314 1 C T - ReadM SNP 0038.scaffold00149 723333 1 T C - ReadM SNP 0038.scaffold00149 723471 1 T G - ReadM SNP 0038.scaffold00149 723511 1 G A - ReadM INDEL 0038.scaffold00149 723575 1 C . - ScafM SNP 0038.scaffold00149 723592 1 G A scaffold10013 ScafM INDEL 0038.scaffold00149 723598 2 AT .. scaffold10013 ScafM SNP 0038.scaffold00149 723601 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 723639 1 C T scaffold10013 ScafM INDEL 0038.scaffold00149 723642 2 .. CT scaffold10013 ScafM SNP 0038.scaffold00149 723695 2 CC TT scaffold10013 ScafM SNP 0038.scaffold00149 723924 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 723948 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 723954 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 723962 1 A C scaffold10013 ScafM INDEL 0038.scaffold00149 724027 24 ........................ GAGAGGAACTCTCATTGTTGAAAA scaffold10013 ScafM SNP 0038.scaffold00149 724121 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 724179 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 724193 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 724212 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 724225 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 724242 1 A G scaffold10013 ScafM INDEL 0038.scaffold00149 724286 2 AT .. scaffold10013 ScafM SNP 0038.scaffold00149 724291 2 GT TA scaffold10013 ScafM SNP 0038.scaffold00149 724294 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 724345 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 724358 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 724377 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 724395 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 724408 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 724433 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 724467 1 A C scaffold10013 Both SNP 0038.scaffold00149 724524 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 724635 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 724679 1 C T scaffold10013 ScafM INDEL 0038.scaffold00149 724686 2 .. TT scaffold10013 ScafM SNP 0038.scaffold00149 724688 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 724699 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 724706 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 724780 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 724793 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 724817 1 G A scaffold10013 ScafM INDEL 0038.scaffold00149 724891 4 GACA .... scaffold10013 ScafM SNP 0038.scaffold00149 724950 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 724958 1 A T scaffold10013 Both SNP 0038.scaffold00149 725037 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 725080 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 725134 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 725137 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 725175 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 725205 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 725208 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 725219 1 G A scaffold10013 Both SNP 0038.scaffold00149 725296 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 725310 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 725312 1 G T scaffold10013 Both SNP 0038.scaffold00149 725419 1 T C scaffold10013 Both INDEL 0038.scaffold00149 725438 1 A . scaffold10013 Both SNP 0038.scaffold00149 725498 1 T C scaffold10013 Both SNP 0038.scaffold00149 725542 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 725615 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 725626 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 725634 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 725645 1 A G scaffold10013 Both SNP 0038.scaffold00149 725731 1 C G scaffold10013 Both SNP 0038.scaffold00149 725741 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 725750 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 725775 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 725801 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 725808 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 725841 1 G T scaffold10013 Both SNP 0038.scaffold00149 725846 1 A G scaffold10013 Both SNP 0038.scaffold00149 725866 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 725944 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 725947 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 725962 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 725979 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 725986 1 T C scaffold10013 ReadM SNP 0038.scaffold00149 726031 1 T C - ReadM SNP 0038.scaffold00149 726055 1 T C - Both SNP 0038.scaffold00149 726191 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 726231 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 726234 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 726249 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 726251 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 726318 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 726322 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 726325 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 726362 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 726378 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 726383 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 726396 1 A G scaffold10013 Both SNP 0038.scaffold00149 726418 1 G A scaffold10013 Both SNP 0038.scaffold00149 726422 1 C A scaffold10013 Both SNP 0038.scaffold00149 726508 1 C T scaffold10013 Both SNP 0038.scaffold00149 726525 1 G A scaffold10013 Both SNP 0038.scaffold00149 726582 1 C T scaffold10013 Both SNP 0038.scaffold00149 726604 1 C T scaffold10013 Both SNP 0038.scaffold00149 726703 1 G C scaffold10013 Both SNP 0038.scaffold00149 726770 1 C T scaffold10013 Both SNP 0038.scaffold00149 726813 1 G T scaffold10013 ReadM SNP 0038.scaffold00149 726914 1 T C - ReadM SNP 0038.scaffold00149 726944 1 G T - ReadM SNP 0038.scaffold00149 726964 1 A T - ReadM SNP 0038.scaffold00149 727611 1 T A - ReadM SNP 0038.scaffold00149 727639 1 G T - ReadM SNP 0038.scaffold00149 727658 1 A C - ReadM SNP 0038.scaffold00149 727777 1 A G - ScafM SNP 0038.scaffold00149 727940 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 727967 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 727973 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 727977 1 A C scaffold10013 Both SNP 0038.scaffold00149 728058 1 C T scaffold10013 Both SNP 0038.scaffold00149 728066 1 G A scaffold10013 Both SNP 0038.scaffold00149 728089 1 G T scaffold10013 Both SNP 0038.scaffold00149 728167 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 728213 2 AG GC scaffold10013 ScafM SNP 0038.scaffold00149 728221 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 728231 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 728352 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 728382 1 C A scaffold10013 ScafM SNP 0038.scaffold00149 728387 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 728413 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 728428 1 G A scaffold10013 ScafM INDEL 0038.scaffold00149 728431 1 A . scaffold10013 ScafM SNP 0038.scaffold00149 728434 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 736384 1 G A scaffold11049 ScafM SNP 0038.scaffold00149 736482 1 T A scaffold11049 ScafM INDEL 0038.scaffold00149 736487 1 . A scaffold11049 ScafM SNP 0038.scaffold00149 736496 1 T A scaffold11049 ScafM SNP 0038.scaffold00149 736499 1 C T scaffold11049 ScafM SNP 0038.scaffold00149 738350 1 C T scaffold10013 ReadM SNP 0038.scaffold00149 738707 1 A G - ReadM SNP 0038.scaffold00149 738718 1 T C - ReadM SNP 0038.scaffold00149 738855 1 T A - Both SNP 0038.scaffold00149 738894 1 T G scaffold10013 ScafM INDEL 0038.scaffold00149 738951 1 T . scaffold10013 ScafM SNP 0038.scaffold00149 738959 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 738969 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 738981 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 738984 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 738988 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 738990 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 739004 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 739028 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 739033 1 A G scaffold10013 Both SNP 0038.scaffold00149 739052 1 A G scaffold10013 Both INDEL 0038.scaffold00149 739074 1 . A scaffold10013 ReadM SNP 0038.scaffold00149 739094 1 C T - ReadM SNP 0038.scaffold00149 739152 1 A T - ReadM SNP 0038.scaffold00149 739197 1 T C - ReadM SNP 0038.scaffold00149 739227 1 C T - ReadM SNP 0038.scaffold00149 739243 1 C G - ReadM SNP 0038.scaffold00149 739266 1 C T - ReadM INDEL 0038.scaffold00149 739364 1 . T - ReadM SNP 0038.scaffold00149 739456 1 C A - ReadM SNP 0038.scaffold00149 739529 1 G A - ReadM SNP 0038.scaffold00149 739533 1 C G - ReadM SNP 0038.scaffold00149 739574 1 G C - ReadM SNP 0038.scaffold00149 739633 1 T A - ReadM SNP 0038.scaffold00149 739636 1 A T - ReadM SNP 0038.scaffold00149 739739 1 A G - ReadM SNP 0038.scaffold00149 739749 1 G A - ReadM SNP 0038.scaffold00149 739776 1 T C - ReadM INDEL 0038.scaffold00149 739798 1 T . - ReadM SNP 0038.scaffold00149 739951 1 A G - ReadM SNP 0038.scaffold00149 740066 1 T A - ReadM INDEL 0038.scaffold00149 740074 1 T . - ReadM SNP 0038.scaffold00149 740110 1 G A - ReadM SNP 0038.scaffold00149 740136 1 C A - ReadM SNP 0038.scaffold00149 740166 1 A G - ReadM SNP 0038.scaffold00149 740383 1 T C - Both INDEL 0038.scaffold00149 740478 1 . T scaffold10013 ScafM SNP 0038.scaffold00149 740518 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 740522 1 C T scaffold10013 ScafM INDEL 0038.scaffold00149 740524 1 . G scaffold10013 ScafM SNP 0038.scaffold00149 740531 1 A C scaffold10013 Both SNP 0038.scaffold00149 740565 1 T G scaffold10013 Both SNP 0038.scaffold00149 740604 1 G A scaffold10013 Both SNP 0038.scaffold00149 740630 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 740654 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 740658 1 C T scaffold10013 ReadM SNP 0038.scaffold00149 740699 1 C A - ReadM SNP 0038.scaffold00149 740706 1 A G - ReadM INDEL 0038.scaffold00149 740724 1 . T - ReadM SNP 0038.scaffold00149 740779 1 C G - ReadM SNP 0038.scaffold00149 741020 1 C T - ReadM SNP 0038.scaffold00149 741129 1 T C - ReadM SNP 0038.scaffold00149 741146 1 C A - ReadM SNP 0038.scaffold00149 741274 1 T C - ReadM SNP 0038.scaffold00149 741297 1 C G - ReadM SNP 0038.scaffold00149 741510 1 T C - ReadM SNP 0038.scaffold00149 741541 1 G A - ReadM SNP 0038.scaffold00149 741593 1 G T - ReadM SNP 0038.scaffold00149 741650 1 A G - ReadM SNP 0038.scaffold00149 741666 1 G A - ReadM SNP 0038.scaffold00149 741675 1 G C - ReadM SNP 0038.scaffold00149 741761 1 T C - ReadM SNP 0038.scaffold00149 741773 1 C G - ReadM SNP 0038.scaffold00149 741806 1 G A - ReadM SNP 0038.scaffold00149 741842 1 C T - ReadM SNP 0038.scaffold00149 741876 1 T A - ReadM SNP 0038.scaffold00149 741899 1 C T - ReadM SNP 0038.scaffold00149 741916 1 T C - ReadM SNP 0038.scaffold00149 741989 1 T A - ReadM SNP 0038.scaffold00149 742094 1 A G - ReadM SNP 0038.scaffold00149 742233 1 C T - ReadM SNP 0038.scaffold00149 742246 1 G A - ReadM SNP 0038.scaffold00149 742256 1 C T - ReadM SNP 0038.scaffold00149 742316 1 A G - ReadM SNP 0038.scaffold00149 742351 1 G A - ReadM SNP 0038.scaffold00149 742387 1 T C - Both SNP 0038.scaffold00149 742474 1 C G scaffold10013 Both SNP 0038.scaffold00149 742497 1 A G scaffold10013 Both SNP 0038.scaffold00149 742522 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 742535 1 G C scaffold10013 ScafM INDEL 0038.scaffold00149 742549 2 CT .. scaffold10013 ScafM SNP 0038.scaffold00149 742556 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 742570 1 T A scaffold10013 ScafM INDEL 0038.scaffold00149 742596 3 GAA ... scaffold10013 Both SNP 0038.scaffold00149 742619 1 G A scaffold10013 Both SNP 0038.scaffold00149 742664 1 C T scaffold10013 Both SNP 0038.scaffold00149 742696 1 G C scaffold10013 Both SNP 0038.scaffold00149 742752 1 T C scaffold10013 Both SNP 0038.scaffold00149 742797 1 G A scaffold10013 Both SNP 0038.scaffold00149 742852 1 G A scaffold10013 Both SNP 0038.scaffold00149 743093 1 C T scaffold10013 Both SNP 0038.scaffold00149 743148 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 743290 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 743325 1 T C scaffold10013 ScafM INDEL 0038.scaffold00149 743341 2 TT .. scaffold10013 ScafM SNP 0038.scaffold00149 743352 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 743398 1 A G scaffold10013 Both SNP 0038.scaffold00149 743430 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 743490 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 743537 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 743569 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 743652 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 743654 1 A T scaffold10013 ScafM SNP 0038.scaffold00149 743719 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 743721 4 GGGG AAAT scaffold10013 ScafM SNP 0038.scaffold00149 743729 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 743742 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 743806 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 743862 1 G C scaffold10013 ScafM SNP 0038.scaffold00149 743873 1 C T scaffold10013 Both SNP 0038.scaffold00149 744681 1 G T scaffold10013 Both SNP 0038.scaffold00149 744692 1 T G scaffold10013 Both INDEL 0038.scaffold00149 744711 1 . C scaffold10013 ScafM SNP 0038.scaffold00149 744790 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 744811 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 744852 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 744881 1 C G scaffold10013 ScafM SNP 0038.scaffold00149 744890 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 744914 1 C A scaffold10013 ReadM SNP 0038.scaffold00149 749333 1 C T - ReadM SNP 0038.scaffold00149 750647 1 C T - ReadM SNP 0038.scaffold00149 750930 1 A G - ReadM SNP 0038.scaffold00149 751107 1 A T - ReadM SNP 0038.scaffold00149 751133 1 T C - ReadM SNP 0038.scaffold00149 751502 1 G A - ReadM SNP 0038.scaffold00149 751888 1 C T - ReadM SNP 0038.scaffold00149 753312 1 C T - ReadM SNP 0038.scaffold00149 753517 1 T C - ReadM SNP 0038.scaffold00149 753670 1 A T - ScafM INDEL 0038.scaffold00149 760981 1 . C scaffold10013 ScafM SNP 0038.scaffold00149 761002 1 T G scaffold10013 ScafM SNP 0038.scaffold00149 761010 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 761088 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 761114 2 AA GG scaffold10013 ScafM SNP 0038.scaffold00149 761131 1 G A scaffold10013 Both SNP 0038.scaffold00149 761165 1 G C scaffold10013 Both SNP 0038.scaffold00149 761220 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 761319 1 A C scaffold10013 ScafM SNP 0038.scaffold00149 761321 1 G A scaffold10013 Both SNP 0038.scaffold00149 761361 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 761397 1 T C scaffold10013 ScafM SNP 0038.scaffold00149 761407 1 G A scaffold10013 ScafM SNP 0038.scaffold00149 761414 1 A T scaffold10013 Both INDEL 0038.scaffold00149 761441 2 GA .. scaffold10013 Both SNP 0038.scaffold00149 761544 1 A G scaffold10013 Both SNP 0038.scaffold00149 761561 1 G T scaffold10013 Both SNP 0038.scaffold00149 761603 1 T G scaffold10013 Both SNP 0038.scaffold00149 761625 1 G A scaffold10013 Both SNP 0038.scaffold00149 761652 1 T G scaffold10013 Both SNP 0038.scaffold00149 761664 1 C T scaffold10013 Both SNP 0038.scaffold00149 761813 1 C T scaffold10013 ScafM SNP 0038.scaffold00149 761849 1 A G scaffold10013 ScafM SNP 0038.scaffold00149 761863 1 G T scaffold10013 ScafM SNP 0038.scaffold00149 761866 1 T A scaffold10013 ScafM SNP 0038.scaffold00149 761872 1 A G scaffold10013 Both SNP 0038.scaffold00149 761945 1 T C scaffold10013 Both SNP 0038.scaffold00149 761958 1 T C scaffold10013 ReadM SNP 0038.scaffold00149 762275 1 T C - ReadM SNP 0038.scaffold00149 763878 1 G C - ReadM SNP 0038.scaffold00149 763971 1 A G - ReadM SNP 0038.scaffold00149 765053 1 T C - ReadM SNP 0038.scaffold00149 765082 1 G A - ReadM SNP 0038.scaffold00149 765166 1 C G - ReadM INDEL 0038.scaffold00149 765385 1 . G - ReadM SNP 0038.scaffold00149 765444 1 A G - ReadM SNP 0038.scaffold00149 765913 1 C T - ScafM SNP 0038.scaffold00149 766159 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 766164 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 766176 2 GG AA scaffold10954 ScafM SNP 0038.scaffold00149 766185 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 766205 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 766213 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 766248 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 767782 1 G A scaffold10954 ScafM INDEL 0038.scaffold00149 767801 2 .. AA scaffold10954 ScafM SNP 0038.scaffold00149 767839 1 C A scaffold10954 ScafM SNP 0038.scaffold00149 767919 1 A G scaffold10954 ReadM SNP 0038.scaffold00149 768741 1 G A - ReadM SNP 0038.scaffold00149 768777 1 C T - ReadM SNP 0038.scaffold00149 768826 1 T A - ReadM SNP 0038.scaffold00149 768944 1 A C - ReadM SNP 0038.scaffold00149 768977 1 C T - ReadM SNP 0038.scaffold00149 769051 1 C G - ReadM SNP 0038.scaffold00149 769063 1 C T - ReadM SNP 0038.scaffold00149 769194 1 T C - ReadM SNP 0038.scaffold00149 769213 1 C T - ReadM SNP 0038.scaffold00149 770637 1 A T - ReadM SNP 0038.scaffold00149 770665 1 A G - ReadM SNP 0038.scaffold00149 771159 1 T G - ReadM SNP 0038.scaffold00149 771176 1 A T - ReadM SNP 0038.scaffold00149 771261 1 T C - ReadM SNP 0038.scaffold00149 771321 1 A G - ReadM SNP 0038.scaffold00149 772741 1 A G - ReadM SNP 0038.scaffold00149 772811 1 A C - ReadM SNP 0038.scaffold00149 772934 1 G T - ReadM SNP 0038.scaffold00149 773552 1 G A - ReadM SNP 0038.scaffold00149 773607 1 A T - ReadM SNP 0038.scaffold00149 773619 1 A G - ReadM SNP 0038.scaffold00149 773670 1 A G - ReadM SNP 0038.scaffold00149 773705 1 T G - ReadM SNP 0038.scaffold00149 773739 1 C A - ReadM SNP 0038.scaffold00149 773788 1 T C - ReadM SNP 0038.scaffold00149 773805 1 G C - ReadM SNP 0038.scaffold00149 773861 1 C T - ReadM SNP 0038.scaffold00149 774126 1 C T - ReadM SNP 0038.scaffold00149 774184 1 A T - ReadM SNP 0038.scaffold00149 774364 1 G A - ReadM SNP 0038.scaffold00149 774406 1 C T - ReadM SNP 0038.scaffold00149 774608 1 C T - ReadM SNP 0038.scaffold00149 774646 1 A G - ScafM INDEL 0038.scaffold00149 779583 3 CAC ... scaffold2348 ScafM SNP 0038.scaffold00149 779592 1 A G scaffold2348 ScafM SNP 0038.scaffold00149 779609 1 A G scaffold2348 ScafM SNP 0038.scaffold00149 779630 1 T A scaffold2348 ScafM SNP 0038.scaffold00149 779688 1 C A scaffold2348 ScafM SNP 0038.scaffold00149 779690 1 A G scaffold2348 ScafM SNP 0038.scaffold00149 779699 2 TG CA scaffold2348 ScafM SNP 0038.scaffold00149 779746 1 G A scaffold2348 ScafM INDEL 0038.scaffold00149 779762 1 C . scaffold2348 ScafM INDEL 0038.scaffold00149 779776 2 .. TT scaffold2348 ScafM INDEL 0038.scaffold00149 779838 2 GT .A scaffold2348 ScafM INDEL 0038.scaffold00149 779842 1 . G scaffold2348 ScafM SNP 0038.scaffold00149 779848 1 T G scaffold2348 ScafM SNP 0038.scaffold00149 779851 1 T G scaffold2348 ScafM SNP 0038.scaffold00149 779865 1 A T scaffold2348 ScafM SNP 0038.scaffold00149 779890 1 A T scaffold2348 ScafM SNP 0038.scaffold00149 779899 1 C T scaffold2348 ScafM SNP 0038.scaffold00149 779903 1 T C scaffold2348 ScafM SNP 0038.scaffold00149 779922 1 A G scaffold2348 ScafM SNP 0038.scaffold00149 779924 1 G A scaffold2348 ScafM INDEL 0038.scaffold00149 780006 14 .............. GTATATAAAATTTT scaffold2348 ScafM SNP 0038.scaffold00149 780027 1 G A scaffold2348 ScafM SNP 0038.scaffold00149 780030 1 T G scaffold2348 ScafM SNP 0038.scaffold00149 780072 1 T C scaffold2348 ScafM INDEL 0038.scaffold00149 780084 4 .... AAAT scaffold2348 ScafM SNP 0038.scaffold00149 780105 1 C T scaffold2348 ScafM SNP 0038.scaffold00149 780114 1 A G scaffold2348 ScafM SNP 0038.scaffold00149 780122 1 G A scaffold2348 ScafM INDEL 0038.scaffold00149 780127 1 . A scaffold2348 ScafM SNP 0038.scaffold00149 780132 1 G A scaffold2348 ScafM SNP 0038.scaffold00149 780141 1 G T scaffold2348 ReadM SNP 0038.scaffold00149 781706 1 C T - ReadM SNP 0038.scaffold00149 781730 1 T C - ReadM SNP 0038.scaffold00149 781922 1 G A - ReadM SNP 0038.scaffold00149 781932 1 A C - ReadM SNP 0038.scaffold00149 782121 1 G A - ScafM SNP 0038.scaffold00149 782725 1 T G scaffold10954 ScafM SNP 0038.scaffold00149 782748 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 782766 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 782781 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 782836 1 A T scaffold10954 ScafM SNP 0038.scaffold00149 782844 2 TA CG scaffold10954 ScafM SNP 0038.scaffold00149 782866 1 T G scaffold10954 Both SNP 0038.scaffold00149 782920 1 A G scaffold10954 Both SNP 0038.scaffold00149 782966 1 G T scaffold10954 ScafM SNP 0038.scaffold00149 782986 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 783010 1 T C scaffold10954 ReadM SNP 0038.scaffold00149 783146 1 T A - ReadM SNP 0038.scaffold00149 783266 1 A G - ReadM SNP 0038.scaffold00149 783276 1 G A - ReadM SNP 0038.scaffold00149 783433 1 A T - ReadM SNP 0038.scaffold00149 783491 1 A G - ReadM INDEL 0038.scaffold00149 783559 1 . C - ReadM SNP 0038.scaffold00149 783778 1 T C - ReadM SNP 0038.scaffold00149 783781 1 G T - ReadM SNP 0038.scaffold00149 783830 1 A T - ReadM SNP 0038.scaffold00149 783861 1 A C - ReadM SNP 0038.scaffold00149 783874 1 A G - ReadM SNP 0038.scaffold00149 784005 1 A G - ReadM SNP 0038.scaffold00149 784017 1 A T - ReadM SNP 0038.scaffold00149 784200 1 A C - ReadM INDEL 0038.scaffold00149 784220 1 A . - ReadM SNP 0038.scaffold00149 784313 1 G A - ReadM INDEL 0038.scaffold00149 784984 1 . A - ReadM SNP 0038.scaffold00149 785027 1 G A - ReadM SNP 0038.scaffold00149 785058 1 T C - ReadM SNP 0038.scaffold00149 785112 1 T C - ReadM INDEL 0038.scaffold00149 785134 1 . T - ReadM SNP 0038.scaffold00149 785147 1 T C - ReadM INDEL 0038.scaffold00149 785188 1 . A - ReadM SNP 0038.scaffold00149 785286 1 A T - ReadM SNP 0038.scaffold00149 785343 1 T C - ReadM INDEL 0038.scaffold00149 785380 1 T . - ReadM SNP 0038.scaffold00149 785417 1 C T - ReadM SNP 0038.scaffold00149 785419 1 A G - ReadM SNP 0038.scaffold00149 785461 1 A G - ReadM SNP 0038.scaffold00149 785488 1 A T - ReadM SNP 0038.scaffold00149 785558 1 C T - ReadM SNP 0038.scaffold00149 785568 1 A C - ReadM SNP 0038.scaffold00149 785590 1 T A - ReadM SNP 0038.scaffold00149 785653 1 A T - ReadM SNP 0038.scaffold00149 785721 1 T C - ReadM SNP 0038.scaffold00149 785763 1 G A - ReadM SNP 0038.scaffold00149 785775 1 G A - ReadM SNP 0038.scaffold00149 785819 1 A C - ReadM SNP 0038.scaffold00149 785853 1 A T - ReadM SNP 0038.scaffold00149 785967 1 C G - ReadM SNP 0038.scaffold00149 785991 1 G A - ReadM SNP 0038.scaffold00149 786696 1 G A - ScafM SNP 0038.scaffold00149 786872 1 G A scaffold10954 ReadM SNP 0038.scaffold00149 786962 1 A T - ReadM SNP 0038.scaffold00149 787171 1 C T - ReadM SNP 0038.scaffold00149 787182 1 C T - ReadM SNP 0038.scaffold00149 787407 1 G C - ReadM SNP 0038.scaffold00149 788130 1 A G - ReadM INDEL 0038.scaffold00149 788149 1 . A - ReadM SNP 0038.scaffold00149 788164 1 G T - ReadM SNP 0038.scaffold00149 788321 1 A G - ReadM SNP 0038.scaffold00149 788333 1 T G - ReadM SNP 0038.scaffold00149 788396 1 C A - ReadM INDEL 0038.scaffold00149 788462 1 . A - Both SNP 0038.scaffold00149 788549 1 T G scaffold10954 Both SNP 0038.scaffold00149 788623 1 C A scaffold10954 Both SNP 0038.scaffold00149 788727 1 A G scaffold10954 Both SNP 0038.scaffold00149 788786 1 C A scaffold10954 Both SNP 0038.scaffold00149 788817 1 C T scaffold10954 Both SNP 0038.scaffold00149 788822 1 T C scaffold10954 ReadM SNP 0038.scaffold00149 789082 1 A G - ReadM SNP 0038.scaffold00149 789109 1 G C - ReadM SNP 0038.scaffold00149 789116 1 A G - ReadM SNP 0038.scaffold00149 789196 1 A C - ReadM SNP 0038.scaffold00149 789212 1 C T - ReadM SNP 0038.scaffold00149 789428 1 G A - ReadM SNP 0038.scaffold00149 789618 1 T A - ReadM SNP 0038.scaffold00149 789667 1 G A - ReadM INDEL 0038.scaffold00149 789855 1 . A - ReadM SNP 0038.scaffold00149 789866 1 G A - ReadM SNP 0038.scaffold00149 789923 1 G A - ReadM SNP 0038.scaffold00149 789944 1 C T - ReadM SNP 0038.scaffold00149 790046 1 G C - ReadM SNP 0038.scaffold00149 790154 1 G T - ReadM SNP 0038.scaffold00149 799341 1 C T - ReadM SNP 0038.scaffold00149 799365 1 G T - ReadM INDEL 0038.scaffold00149 799418 1 . T - ReadM SNP 0038.scaffold00149 799443 1 C G - Both SNP 0038.scaffold00149 799631 1 C T scaffold10954 Both SNP 0038.scaffold00149 799671 1 C T scaffold10954 ReadM SNP 0038.scaffold00149 799711 1 G A - ReadM SNP 0038.scaffold00149 799924 1 G A - ReadM SNP 0038.scaffold00149 799937 1 A G - ReadM SNP 0038.scaffold00149 800109 1 G T - ReadM SNP 0038.scaffold00149 800136 1 C T - Both SNP 0038.scaffold00149 800263 1 G T scaffold10954 ScafM INDEL 0038.scaffold00149 800267 2 .. AA scaffold10954 ScafM SNP 0038.scaffold00149 800279 1 C T scaffold10954 ScafM SNP 0038.scaffold00149 800306 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 800313 1 A G scaffold10954 Both SNP 0038.scaffold00149 800322 1 G A scaffold10954 ReadM SNP 0038.scaffold00149 800386 1 C T - ReadM SNP 0038.scaffold00149 800444 1 T C - ReadM SNP 0038.scaffold00149 800495 1 T C - ReadM SNP 0038.scaffold00149 800538 1 C G - ReadM SNP 0038.scaffold00149 800611 1 C T - ReadM SNP 0038.scaffold00149 800670 1 A G - ReadM SNP 0038.scaffold00149 800699 1 G A - ReadM SNP 0038.scaffold00149 800722 1 G A - ReadM SNP 0038.scaffold00149 800756 1 G A - ReadM SNP 0038.scaffold00149 800794 1 T C - ReadM SNP 0038.scaffold00149 800827 1 C G - ReadM SNP 0038.scaffold00149 800911 1 G T - ReadM SNP 0038.scaffold00149 800920 1 C A - ReadM SNP 0038.scaffold00149 800930 1 A C - ReadM SNP 0038.scaffold00149 801110 1 T G - ReadM SNP 0038.scaffold00149 801133 1 A G - ReadM SNP 0038.scaffold00149 801154 1 A C - ReadM SNP 0038.scaffold00149 801172 1 A C - ReadM SNP 0038.scaffold00149 801252 1 G A - ReadM SNP 0038.scaffold00149 801461 1 A G - ReadM SNP 0038.scaffold00149 801467 1 T C - ReadM SNP 0038.scaffold00149 801510 1 C T - ReadM SNP 0038.scaffold00149 801540 1 T C - ReadM SNP 0038.scaffold00149 801547 1 T C - ReadM SNP 0038.scaffold00149 801598 1 T C - ReadM SNP 0038.scaffold00149 801657 1 G A - ReadM SNP 0038.scaffold00149 801718 1 G A - ReadM SNP 0038.scaffold00149 801776 1 G A - ReadM INDEL 0038.scaffold00149 801793 1 A . - ReadM SNP 0038.scaffold00149 801873 1 G A - ReadM SNP 0038.scaffold00149 803148 1 T C - ReadM SNP 0038.scaffold00149 803157 1 T C - ReadM SNP 0038.scaffold00149 803264 1 G A - ReadM SNP 0038.scaffold00149 803277 1 C T - ReadM SNP 0038.scaffold00149 803421 1 A C - ReadM SNP 0038.scaffold00149 803455 1 A G - ReadM SNP 0038.scaffold00149 803500 1 A G - ReadM SNP 0038.scaffold00149 803511 1 C G - ReadM SNP 0038.scaffold00149 803569 1 T C - ReadM SNP 0038.scaffold00149 803589 1 G A - ReadM SNP 0038.scaffold00149 803612 1 A C - ReadM SNP 0038.scaffold00149 803687 1 T C - ReadM SNP 0038.scaffold00149 803696 1 G A - ReadM SNP 0038.scaffold00149 803712 1 G C - ReadM SNP 0038.scaffold00149 803851 1 A G - ReadM SNP 0038.scaffold00149 804090 1 C T - ReadM SNP 0038.scaffold00149 804095 1 G A - ReadM SNP 0038.scaffold00149 804135 1 T C - ReadM SNP 0038.scaffold00149 804219 1 C T - ReadM SNP 0038.scaffold00149 804246 1 A G - ReadM SNP 0038.scaffold00149 804301 1 C T - ReadM SNP 0038.scaffold00149 804539 1 C T - ReadM SNP 0038.scaffold00149 804642 1 T C - ReadM SNP 0038.scaffold00149 804661 1 G A - ReadM SNP 0038.scaffold00149 804681 1 T A - ReadM SNP 0038.scaffold00149 804734 1 T A - ReadM SNP 0038.scaffold00149 804815 1 G A - ReadM SNP 0038.scaffold00149 804831 1 G A - ReadM SNP 0038.scaffold00149 804942 1 G A - ReadM SNP 0038.scaffold00149 804994 1 A C - ReadM SNP 0038.scaffold00149 804999 1 G A - ReadM SNP 0038.scaffold00149 805493 1 T A - ReadM SNP 0038.scaffold00149 805501 1 T A - ReadM SNP 0038.scaffold00149 805559 1 A G - ReadM SNP 0038.scaffold00149 806467 1 G C - ReadM SNP 0038.scaffold00149 806691 1 A G - ReadM SNP 0038.scaffold00149 806701 1 T C - Both INDEL 0038.scaffold00149 806731 1 . T scaffold10954 ScafM SNP 0038.scaffold00149 806900 1 A T scaffold10954 ScafM SNP 0038.scaffold00149 806905 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 806979 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 806981 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 807002 1 A G scaffold10954 Both SNP 0038.scaffold00149 807008 1 A G scaffold10954 Both SNP 0038.scaffold00149 807068 1 A C scaffold10954 Both SNP 0038.scaffold00149 807148 1 C T scaffold10954 Both SNP 0038.scaffold00149 807215 1 G C scaffold10954 Both SNP 0038.scaffold00149 807317 1 C T scaffold10954 Both SNP 0038.scaffold00149 807332 1 T A scaffold10954 Both SNP 0038.scaffold00149 807345 1 G C scaffold10954 Both SNP 0038.scaffold00149 807424 1 T C scaffold10954 ReadM SNP 0038.scaffold00149 807454 1 G A - ReadM SNP 0038.scaffold00149 807480 1 T C - ScafM SNP 0038.scaffold00149 807534 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 807536 2 AT GC scaffold10954 ScafM SNP 0038.scaffold00149 807544 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 807584 1 A C scaffold10954 ScafM SNP 0038.scaffold00149 807587 1 C A scaffold10954 ScafM SNP 0038.scaffold00149 807733 1 T G scaffold10954 ScafM SNP 0038.scaffold00149 807827 1 T A scaffold10954 ScafM SNP 0038.scaffold00149 807905 1 A G scaffold10954 ScafM INDEL 0038.scaffold00149 807917 28 TCTAATAATTCGATAATAACTTCTTTTT ............................ scaffold10954 ScafM INDEL 0038.scaffold00149 807949 3 CTC ... scaffold10954 ScafM SNP 0038.scaffold00149 807970 1 G A scaffold10954 ReadM SNP 0038.scaffold00149 808782 1 T A - ReadM SNP 0038.scaffold00149 808811 1 G A - ReadM INDEL 0038.scaffold00149 808852 1 A . - ReadM SNP 0038.scaffold00149 808859 1 G A - ReadM SNP 0038.scaffold00149 808885 1 C T - ReadM SNP 0038.scaffold00149 808967 1 T G - ReadM SNP 0038.scaffold00149 809004 1 C T - ReadM SNP 0038.scaffold00149 809039 1 A C - ReadM SNP 0038.scaffold00149 809085 1 G A - ReadM SNP 0038.scaffold00149 809135 1 T C - ReadM SNP 0038.scaffold00149 809328 1 A C - ReadM SNP 0038.scaffold00149 809426 1 C T - ReadM SNP 0038.scaffold00149 809499 1 A G - ReadM SNP 0038.scaffold00149 809919 1 G T - ReadM SNP 0038.scaffold00149 809929 1 G T - ReadM SNP 0038.scaffold00149 809938 1 A G - ReadM SNP 0038.scaffold00149 811482 1 T G - ReadM SNP 0038.scaffold00149 811543 1 T A - ReadM SNP 0038.scaffold00149 811837 1 T A - ReadM SNP 0038.scaffold00149 811874 1 T C - ReadM SNP 0038.scaffold00149 811892 1 G T - ReadM SNP 0038.scaffold00149 820196 1 G T - ReadM SNP 0038.scaffold00149 820212 1 G A - ReadM SNP 0038.scaffold00149 821258 1 G T - ScafM SNP 0038.scaffold00149 823017 1 C A scaffold10954 ReadM SNP 0038.scaffold00149 823307 1 A G - ReadM SNP 0038.scaffold00149 823420 1 A G - ReadM SNP 0038.scaffold00149 823451 1 G A - Both SNP 0038.scaffold00149 823540 1 G A scaffold10954 Both INDEL 0038.scaffold00149 823561 1 . T scaffold10954 Both SNP 0038.scaffold00149 823574 1 A G scaffold10954 Both SNP 0038.scaffold00149 823651 1 A G scaffold10954 ReadM SNP 0038.scaffold00149 823700 1 A G - ReadM SNP 0038.scaffold00149 823758 1 G A - ReadM SNP 0038.scaffold00149 823943 1 G T - Both INDEL 0038.scaffold00149 824006 1 A . scaffold10954 ScafM INDEL 0038.scaffold00149 824045 5 ATATC ..... scaffold10954 ScafM INDEL 0038.scaffold00149 824051 3 AAT ... scaffold10954 ScafM SNP 0038.scaffold00149 824087 1 T G scaffold10954 ScafM INDEL 0038.scaffold00149 824106 2 AT .. scaffold10954 ScafM INDEL 0038.scaffold00149 824109 5 GGGAC ..... scaffold10954 Both INDEL 0038.scaffold00149 824641 1 T . scaffold10954 Both SNP 0038.scaffold00149 824666 1 A G scaffold10954 ScafM INDEL 0038.scaffold00149 824669 1 T . scaffold10954 Both SNP 0038.scaffold00149 824684 1 A G scaffold10954 ReadM SNP 0038.scaffold00149 824777 1 A T - ReadM SNP 0038.scaffold00149 824837 1 C A - ReadM SNP 0038.scaffold00149 824849 1 C G - ReadM INDEL 0038.scaffold00149 824926 1 . A - ReadM SNP 0038.scaffold00149 824974 1 A G - ReadM SNP 0038.scaffold00149 824982 1 T C - ReadM INDEL 0038.scaffold00149 825028 1 . G - ReadM SNP 0038.scaffold00149 825176 1 A T - ReadM SNP 0038.scaffold00149 825193 1 C T - ReadM SNP 0038.scaffold00149 825199 1 T C - ReadM SNP 0038.scaffold00149 825267 1 C A - Both SNP 0038.scaffold00149 825315 1 T G scaffold10954 Both SNP 0038.scaffold00149 825349 1 C T scaffold10954 Both SNP 0038.scaffold00149 825355 1 G A scaffold10954 Both SNP 0038.scaffold00149 825411 1 C T scaffold10954 Both SNP 0038.scaffold00149 825497 1 A G scaffold10954 Both SNP 0038.scaffold00149 825512 1 A T scaffold10954 Both SNP 0038.scaffold00149 825602 1 T C scaffold10954 ScafM INDEL 0038.scaffold00149 825718 23 ....................... TTTTTTTTTTTTTTTTTTTTTTC scaffold10954 ScafM INDEL 0038.scaffold00149 825719 34 .................................. AATTTTTAATTTTTTTTTTTTTTTTTTTTTTTTT scaffold10954 ScafM SNP 0038.scaffold00149 825736 1 T G scaffold10954 ScafM SNP 0038.scaffold00149 825895 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 825910 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 825916 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 825923 1 T A scaffold10954 Both SNP 0038.scaffold00149 825976 1 T C scaffold10954 Both SNP 0038.scaffold00149 826099 1 A G scaffold10954 Both SNP 0038.scaffold00149 826241 1 C T scaffold10954 Both SNP 0038.scaffold00149 826396 1 T G scaffold10954 Both INDEL 0038.scaffold00149 826423 1 . T scaffold10954 Both SNP 0038.scaffold00149 826516 1 G A scaffold10954 Both SNP 0038.scaffold00149 826814 1 T C scaffold10954 Both SNP 0038.scaffold00149 826850 1 T C scaffold10954 Both SNP 0038.scaffold00149 826951 1 G C scaffold10954 Both SNP 0038.scaffold00149 826954 1 T A scaffold10954 ReadM SNP 0038.scaffold00149 827057 1 A G - ReadM SNP 0038.scaffold00149 827066 1 A G - Both SNP 0038.scaffold00149 827370 1 A T scaffold10954 Both SNP 0038.scaffold00149 827428 1 A G scaffold10954 ScafM INDEL 0038.scaffold00149 827442 1 . G scaffold10954 ScafM SNP 0038.scaffold00149 829614 1 G T scaffold10954 ScafM INDEL 0038.scaffold00149 829712 1 . T scaffold10954 ScafM SNP 0038.scaffold00149 829749 1 A C scaffold10954 ScafM SNP 0038.scaffold00149 829771 1 C T scaffold10954 ScafM INDEL 0038.scaffold00149 829786 1 . A scaffold10954 Both SNP 0038.scaffold00149 830023 1 G A scaffold10954 ReadM SNP 0038.scaffold00149 830147 1 A G - ReadM SNP 0038.scaffold00149 830301 1 T A - ReadM SNP 0038.scaffold00149 830355 1 A T - ReadM SNP 0038.scaffold00149 830384 1 G A - ReadM SNP 0038.scaffold00149 830527 1 A G - Both INDEL 0038.scaffold00149 830697 1 A . scaffold10954 ReadM SNP 0038.scaffold00149 830737 1 T G - ReadM SNP 0038.scaffold00149 831647 1 A C - ReadM SNP 0038.scaffold00149 832157 1 G A - ReadM SNP 0038.scaffold00149 832205 1 T A - ScafM SNP 0038.scaffold00149 833327 1 G T scaffold10954 ScafM SNP 0038.scaffold00149 833332 1 A C scaffold10954 ReadM SNP 0038.scaffold00149 834208 1 G A - ReadM SNP 0038.scaffold00149 834315 1 T A - ReadM SNP 0038.scaffold00149 834339 1 G T - Both SNP 0038.scaffold00149 834395 1 G T scaffold10954 Both SNP 0038.scaffold00149 834404 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 834418 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 834458 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 834469 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 834495 1 C T scaffold10954 ScafM SNP 0038.scaffold00149 834511 1 C T scaffold10954 Both SNP 0038.scaffold00149 834556 1 A T scaffold10954 Both SNP 0038.scaffold00149 834565 1 T C scaffold10954 Both SNP 0038.scaffold00149 834666 1 A T scaffold10954 Both SNP 0038.scaffold00149 834726 1 T C scaffold10954 Both SNP 0038.scaffold00149 834735 1 C A scaffold10954 ScafM INDEL 0038.scaffold00149 835005 9 TACTGACTG ......... scaffold10954 Both SNP 0038.scaffold00149 835020 1 G T scaffold10954 ScafM SNP 0038.scaffold00149 835206 1 T A scaffold10954 ScafM INDEL 0038.scaffold00149 835218 5 ..... CTTAA scaffold10954 ScafM SNP 0038.scaffold00149 835277 1 A G scaffold10954 Both SNP 0038.scaffold00149 835432 1 G A scaffold10954 Both SNP 0038.scaffold00149 835455 1 C T scaffold10954 Both INDEL 0038.scaffold00149 835459 1 A . scaffold10954 ScafM SNP 0038.scaffold00149 835493 1 C T scaffold10954 Both SNP 0038.scaffold00149 835512 1 G T scaffold10954 Both SNP 0038.scaffold00149 835539 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 835554 1 T G scaffold10954 ScafM INDEL 0038.scaffold00149 835600 1 . T scaffold10954 ScafM SNP 0038.scaffold00149 835605 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 835617 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 835652 1 G A scaffold10954 ScafM SNP 0038.scaffold00149 835677 1 A C scaffold10954 Both INDEL 0038.scaffold00149 835710 2 TA .. scaffold10954 ScafM SNP 0038.scaffold00149 835830 1 T G scaffold10954 ScafM SNP 0038.scaffold00149 835884 1 T A scaffold10954 ScafM INDEL 0038.scaffold00149 835947 3 ... ATC scaffold10954 ReadM SNP 0038.scaffold00149 836077 1 A G - ScafM SNP 0038.scaffold00149 836188 1 C G scaffold10954 ScafM SNP 0038.scaffold00149 836401 1 T A scaffold10954 ScafM INDEL 0038.scaffold00149 836613 2 CT .A scaffold10954 ScafM INDEL 0038.scaffold00149 837700 6 ...... AGGAGA scaffold10954 ScafM SNP 0038.scaffold00149 837724 1 A G scaffold10954 ScafM INDEL 0038.scaffold00149 837793 1 . A scaffold10954 ScafM SNP 0038.scaffold00149 837824 1 A T scaffold10954 ScafM SNP 0038.scaffold00149 837841 1 G A scaffold10954 Both INDEL 0038.scaffold00149 837876 1 . G scaffold10954 Both SNP 0038.scaffold00149 837912 1 T C scaffold10954 ScafM INDEL 0038.scaffold00149 837993 3 GAG ... scaffold10954 ScafM SNP 0038.scaffold00149 838009 1 A T scaffold10954 ScafM SNP 0038.scaffold00149 838024 1 C T scaffold10954 Both SNP 0038.scaffold00149 838217 1 A G scaffold10954 ReadM SNP 0038.scaffold00149 838293 1 T C - Both SNP 0038.scaffold00149 838353 1 C G scaffold10954 Both SNP 0038.scaffold00149 838362 1 T C scaffold10954 Both SNP 0038.scaffold00149 838423 1 T A scaffold10954 Both SNP 0038.scaffold00149 838443 1 T C scaffold10954 Both SNP 0038.scaffold00149 838495 1 T A scaffold10954 Both SNP 0038.scaffold00149 838572 1 G T scaffold10954 Both SNP 0038.scaffold00149 838574 1 C T scaffold10954 Both SNP 0038.scaffold00149 838588 1 A G scaffold10954 Both SNP 0038.scaffold00149 838618 1 T C scaffold10954 Both SNP 0038.scaffold00149 838626 1 C T scaffold10954 Both SNP 0038.scaffold00149 838680 1 G A scaffold10954 Both SNP 0038.scaffold00149 838707 1 T C scaffold10954 Both SNP 0038.scaffold00149 838790 1 T C scaffold10954 Both SNP 0038.scaffold00149 838807 1 A T scaffold10954 Both SNP 0038.scaffold00149 838843 1 A T scaffold10954 ScafM SNP 0038.scaffold00149 838861 2 TT AA scaffold10954 Both SNP 0038.scaffold00149 838932 1 A C scaffold10954 Both SNP 0038.scaffold00149 838980 1 C T scaffold10954 ScafM SNP 0038.scaffold00149 839122 2 AT TC scaffold10954 Both SNP 0038.scaffold00149 839153 1 T C scaffold10954 Both SNP 0038.scaffold00149 839161 1 G A scaffold10954 Both SNP 0038.scaffold00149 839317 1 T A scaffold10954 Both SNP 0038.scaffold00149 839375 1 A C scaffold10954 Both SNP 0038.scaffold00149 839383 1 G T scaffold10954 Both SNP 0038.scaffold00149 839560 1 G A scaffold10954 Both SNP 0038.scaffold00149 839598 1 A C scaffold10954 Both SNP 0038.scaffold00149 839714 1 A T scaffold10954 Both INDEL 0038.scaffold00149 839735 1 . C scaffold10954 ScafM SNP 0038.scaffold00149 839807 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 839828 1 C T scaffold10954 ScafM INDEL 0038.scaffold00149 840005 1 . T scaffold10954 ScafM SNP 0038.scaffold00149 840010 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 840012 1 T C scaffold10954 ScafM SNP 0038.scaffold00149 840024 1 T A scaffold10954 ScafM SNP 0038.scaffold00149 840026 1 T A scaffold10954 ScafM SNP 0038.scaffold00149 840040 1 C T scaffold10954 ScafM SNP 0038.scaffold00149 840047 1 A G scaffold10954 ScafM SNP 0038.scaffold00149 840054 1 G A scaffold10954 ScafM INDEL 0038.scaffold00149 840071 4 AAAG ...T scaffold10954 ScafM SNP 0038.scaffold00149 840137 1 T C scaffold10954 ScafM INDEL 0038.scaffold00149 840189 1 T . scaffold10954 ScafM INDEL 0038.scaffold00149 840195 4 AAGT .... scaffold10954 ScafM SNP 0038.scaffold00149 840280 1 C T scaffold10954 ScafM SNP 0038.scaffold00149 840351 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 840382 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 840385 1 C G scaffold13193 ScafM INDEL 0038.scaffold00149 840399 20 .................... AAATTAAGGTAGGAGTTGTA scaffold13193 ScafM INDEL 0038.scaffold00149 840401 3 ... GCA scaffold13193 ScafM SNP 0038.scaffold00149 840481 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 840516 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 840583 2 GG AT scaffold13193 ScafM INDEL 0038.scaffold00149 840627 2 GG .A scaffold13193 ScafM SNP 0038.scaffold00149 840630 2 TT AC scaffold13193 ScafM SNP 0038.scaffold00149 840646 2 GA AG scaffold13193 ScafM SNP 0038.scaffold00149 840814 1 C G scaffold13193 ScafM SNP 0038.scaffold00149 840894 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 846721 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 846729 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 846759 1 G T scaffold13193 ScafM SNP 0038.scaffold00149 846784 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 846803 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 846814 1 T G scaffold13193 ScafM SNP 0038.scaffold00149 846862 1 A T scaffold13193 Both SNP 0038.scaffold00149 846914 1 A G scaffold13193 Both SNP 0038.scaffold00149 846923 1 C T scaffold13193 Both SNP 0038.scaffold00149 846987 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 847027 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 847212 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 847240 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 847281 1 T G scaffold13193 ScafM SNP 0038.scaffold00149 847296 1 C G scaffold13193 ScafM INDEL 0038.scaffold00149 847305 4 TTTT .... scaffold13193 ScafM INDEL 0038.scaffold00149 847331 5 ..... GCATT scaffold13193 ScafM SNP 0038.scaffold00149 847382 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 847398 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 847419 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 847448 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 847459 1 A G scaffold13193 Both SNP 0038.scaffold00149 847548 1 A G scaffold13193 ReadM SNP 0038.scaffold00149 847564 1 T C - ReadM INDEL 0038.scaffold00149 847901 1 A . - ReadM SNP 0038.scaffold00149 847989 1 C G - ReadM SNP 0038.scaffold00149 848065 1 G A - ReadM SNP 0038.scaffold00149 848224 1 C T - ReadM SNP 0038.scaffold00149 848303 1 A G - ReadM SNP 0038.scaffold00149 848366 1 T C - ReadM SNP 0038.scaffold00149 848374 1 T C - ReadM SNP 0038.scaffold00149 848409 1 A G - ReadM SNP 0038.scaffold00149 848415 1 A G - ReadM SNP 0038.scaffold00149 848529 1 G A - ReadM SNP 0038.scaffold00149 848532 1 T G - ReadM SNP 0038.scaffold00149 848537 1 A G - ReadM SNP 0038.scaffold00149 848625 1 T C - ReadM SNP 0038.scaffold00149 848650 1 A T - ReadM SNP 0038.scaffold00149 848699 1 A G - ReadM SNP 0038.scaffold00149 848843 1 C T - ReadM SNP 0038.scaffold00149 848868 1 C T - ReadM SNP 0038.scaffold00149 848883 1 A G - ReadM SNP 0038.scaffold00149 848890 1 T G - ReadM SNP 0038.scaffold00149 848967 1 A T - ReadM SNP 0038.scaffold00149 849010 1 G A - ReadM SNP 0038.scaffold00149 849124 1 T G - Both INDEL 0038.scaffold00149 849137 1 T . scaffold13193 ScafM INDEL 0038.scaffold00149 849209 1 T . scaffold13193 ScafM SNP 0038.scaffold00149 849222 1 C T scaffold13193 Both SNP 0038.scaffold00149 849251 1 G A scaffold13193 Both SNP 0038.scaffold00149 849270 1 T A scaffold13193 Both SNP 0038.scaffold00149 849305 1 C T scaffold13193 Both SNP 0038.scaffold00149 849352 1 T C scaffold13193 Both SNP 0038.scaffold00149 849422 1 G A scaffold13193 Both SNP 0038.scaffold00149 849439 1 G A scaffold13193 Both SNP 0038.scaffold00149 849543 1 C G scaffold13193 Both SNP 0038.scaffold00149 849569 1 C T scaffold13193 Both SNP 0038.scaffold00149 849594 1 G T scaffold13193 ScafM SNP 0038.scaffold00149 849693 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 849706 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 849709 1 A C scaffold13193 ScafM SNP 0038.scaffold00149 849803 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 849975 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 849980 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 849990 1 A G scaffold13193 ScafM INDEL 0038.scaffold00149 849993 1 . G scaffold13193 ScafM SNP 0038.scaffold00149 850019 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 850027 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 850047 1 T A scaffold13193 ScafM INDEL 0038.scaffold00149 850053 1 . T scaffold13193 ScafM SNP 0038.scaffold00149 850222 1 C G scaffold13193 Both INDEL 0038.scaffold00149 850327 1 C . scaffold13193 Both SNP 0038.scaffold00149 850428 1 G A scaffold13193 Both SNP 0038.scaffold00149 850481 1 T G scaffold13193 Both SNP 0038.scaffold00149 850910 1 T A scaffold13193 Both SNP 0038.scaffold00149 851116 1 T G scaffold13193 Both SNP 0038.scaffold00149 851141 1 C T scaffold13193 Both SNP 0038.scaffold00149 851144 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 851248 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 851260 1 G A scaffold13193 Both SNP 0038.scaffold00149 851273 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 851318 1 C G scaffold13193 ScafM INDEL 0038.scaffold00149 851322 3 ... AAC scaffold13193 ScafM SNP 0038.scaffold00149 851334 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 851340 2 TG GC scaffold13193 Both SNP 0038.scaffold00149 851402 1 G C scaffold13193 Both SNP 0038.scaffold00149 851414 1 T G scaffold13193 Both SNP 0038.scaffold00149 851418 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 851467 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 851482 2 CC TT scaffold13193 ScafM INDEL 0038.scaffold00149 851487 29 ............................. AAATAAATAAAATTATCATTAAGGAACAG scaffold13193 ScafM SNP 0038.scaffold00149 851506 1 G C scaffold13193 ScafM SNP 0038.scaffold00149 851508 1 A T scaffold13193 ScafM SNP 0038.scaffold00149 851532 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 851547 1 C G scaffold13193 ScafM SNP 0038.scaffold00149 851561 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 851581 1 A T scaffold13193 ScafM SNP 0038.scaffold00149 851585 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 851622 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 851625 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 851630 1 A G scaffold13193 Both SNP 0038.scaffold00149 852775 1 G C scaffold13193 ScafM SNP 0038.scaffold00149 852905 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 852908 1 A T scaffold13193 ScafM SNP 0038.scaffold00149 852910 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 852919 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 852923 1 T A scaffold13193 ScafM INDEL 0038.scaffold00149 852928 3 TTT ... scaffold13193 ScafM SNP 0038.scaffold00149 852952 1 A C scaffold13193 ScafM SNP 0038.scaffold00149 852968 1 G C scaffold13193 ScafM SNP 0038.scaffold00149 852983 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 853018 1 A T scaffold13193 ScafM SNP 0038.scaffold00149 853046 1 A C scaffold13193 ScafM SNP 0038.scaffold00149 853094 2 CC TG scaffold13193 ScafM SNP 0038.scaffold00149 853113 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 853139 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 853145 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 853149 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 853151 1 A T scaffold13193 ScafM INDEL 0038.scaffold00149 853172 1 . A scaffold13193 ScafM SNP 0038.scaffold00149 853175 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 853438 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 853443 1 A C scaffold13193 ScafM SNP 0038.scaffold00149 853452 1 T C scaffold13193 ScafM INDEL 0038.scaffold00149 853458 1 T . scaffold13193 ScafM SNP 0038.scaffold00149 853461 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 853464 1 T G scaffold13193 ScafM SNP 0038.scaffold00149 853467 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 853473 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 853492 2 TG GT scaffold13193 ScafM SNP 0038.scaffold00149 853504 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 853513 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 853516 1 A T scaffold13193 ScafM SNP 0038.scaffold00149 853534 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 853640 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 853644 1 C T scaffold13193 ScafM INDEL 0038.scaffold00149 853650 1 . G scaffold13193 ScafM SNP 0038.scaffold00149 853690 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 853692 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 853718 1 G A scaffold13193 ScafM INDEL 0038.scaffold00149 853730 8 TGACGGAC ........ scaffold13193 ScafM INDEL 0038.scaffold00149 853787 3 CAT ... scaffold13193 Both SNP 0038.scaffold00149 853848 1 C T scaffold13193 Both SNP 0038.scaffold00149 853864 1 A G scaffold13193 Both INDEL 0038.scaffold00149 853947 1 . A scaffold13193 Both SNP 0038.scaffold00149 853997 1 A T scaffold13193 Both SNP 0038.scaffold00149 854010 1 T A scaffold13193 Both SNP 0038.scaffold00149 854105 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 854128 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 854152 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 856163 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 856172 1 T G scaffold13193 ScafM SNP 0038.scaffold00149 856211 1 T C scaffold13193 ScafM INDEL 0038.scaffold00149 856233 19 ................... TAGTAACTCTGTAGTTTTC scaffold13193 ScafM INDEL 0038.scaffold00149 856237 7 ....... TCCCAAA scaffold13193 ScafM INDEL 0038.scaffold00149 856239 3 ... TAC scaffold13193 ScafM SNP 0038.scaffold00149 856289 2 CT AC scaffold13193 ScafM SNP 0038.scaffold00149 856298 1 G C scaffold13193 ReadM SNP 0038.scaffold00149 856408 1 T C - Both INDEL 0038.scaffold00149 856412 1 . T scaffold13193 ReadM SNP 0038.scaffold00149 856472 1 C T - ReadM SNP 0038.scaffold00149 856486 1 C T - ReadM SNP 0038.scaffold00149 856527 1 A C - ReadM SNP 0038.scaffold00149 856552 1 A T - ScafM SNP 0038.scaffold00149 856619 1 A G scaffold13193 ScafM INDEL 0038.scaffold00149 856635 1 A . scaffold13193 ScafM INDEL 0038.scaffold00149 856637 1 . T scaffold13193 ScafM SNP 0038.scaffold00149 856794 1 C G scaffold13193 ScafM SNP 0038.scaffold00149 856816 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 856833 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857353 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857371 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 857382 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857386 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857388 1 T A scaffold13193 ScafM SNP 0038.scaffold00149 857406 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857422 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857450 1 C A scaffold13193 ScafM SNP 0038.scaffold00149 857496 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 857523 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857558 1 G T scaffold13193 ScafM SNP 0038.scaffold00149 857605 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857628 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857645 2 GA AG scaffold13193 ScafM SNP 0038.scaffold00149 857665 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857695 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857703 1 T C scaffold13193 ScafM SNP 0038.scaffold00149 857722 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 857756 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 857834 1 A G scaffold13193 ScafM SNP 0038.scaffold00149 857843 1 C T scaffold13193 ScafM SNP 0038.scaffold00149 857884 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857894 1 G A scaffold13193 ScafM SNP 0038.scaffold00149 857932 1 C G scaffold13193 ReadM SNP 0038.scaffold00149 859885 1 T C - Both SNP 0038.scaffold00149 860545 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 860591 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 860611 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 860617 1 C A scaffold15679 ScafM SNP 0038.scaffold00149 860622 1 T G scaffold15679 ScafM INDEL 0038.scaffold00149 860670 1 A . scaffold15679 ScafM SNP 0038.scaffold00149 862169 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 862198 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 862209 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 862323 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 862336 1 A C scaffold15679 ScafM SNP 0038.scaffold00149 862363 1 G T scaffold15679 ScafM SNP 0038.scaffold00149 862367 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 862383 1 T G scaffold15679 ScafM INDEL 0038.scaffold00149 862419 2 .A CG scaffold15679 ScafM SNP 0038.scaffold00149 862427 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 862443 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 862469 1 C A scaffold15679 ScafM SNP 0038.scaffold00149 862481 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 862496 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 862509 1 T C scaffold15679 Both SNP 0038.scaffold00149 862996 1 A G scaffold15679 Both SNP 0038.scaffold00149 863150 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 863607 1 A C scaffold15679 ScafM INDEL 0038.scaffold00149 863618 3 ACT ... scaffold15679 Both SNP 0038.scaffold00149 863699 1 G T scaffold15679 Both SNP 0038.scaffold00149 863714 1 G T scaffold15679 Both SNP 0038.scaffold00149 863933 1 T C scaffold15679 Both SNP 0038.scaffold00149 864090 1 A G scaffold15679 Both SNP 0038.scaffold00149 864093 1 A T scaffold15679 ReadM SNP 0038.scaffold00149 864136 1 G C - Both SNP 0038.scaffold00149 864218 1 A T scaffold15679 Both SNP 0038.scaffold00149 864245 1 T G scaffold15679 Both SNP 0038.scaffold00149 864278 1 G T scaffold15679 ScafM SNP 0038.scaffold00149 865281 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 865364 1 C A scaffold15679 ScafM SNP 0038.scaffold00149 865371 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 865379 1 C A scaffold15679 ScafM INDEL 0038.scaffold00149 865429 41 ......................................... GGAAATCGTACATATTGACAAGAGTTAAACTCTAAACTACA scaffold15679 ScafM SNP 0038.scaffold00149 865771 1 C A scaffold15679 ScafM SNP 0038.scaffold00149 865829 1 A G scaffold15679 ScafM INDEL 0038.scaffold00149 866093 2 TC .. scaffold15679 Both SNP 0038.scaffold00149 866169 1 G C scaffold15679 ScafM INDEL 0038.scaffold00149 866516 2 .. AA scaffold15679 Both SNP 0038.scaffold00149 866541 1 C T scaffold15679 Both SNP 0038.scaffold00149 866683 1 G C scaffold15679 ScafM INDEL 0038.scaffold00149 866697 4 TCGT .... scaffold15679 ScafM SNP 0038.scaffold00149 866702 1 T A scaffold15679 ReadM SNP 0038.scaffold00149 866758 1 A G - ReadM SNP 0038.scaffold00149 866768 1 G A - ScafM SNP 0038.scaffold00149 866891 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 866912 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 866943 1 G T scaffold15679 ScafM SNP 0038.scaffold00149 866945 1 A G scaffold15679 Both SNP 0038.scaffold00149 867002 1 T A scaffold15679 ReadM SNP 0038.scaffold00149 867564 1 G A - ReadM SNP 0038.scaffold00149 867567 1 T C - ReadM SNP 0038.scaffold00149 867603 1 A G - ScafM SNP 0038.scaffold00149 867764 1 T A scaffold15679 ScafM SNP 0038.scaffold00149 867772 1 T A scaffold15679 ScafM SNP 0038.scaffold00149 867804 1 A G scaffold15679 ScafM INDEL 0038.scaffold00149 867815 2 TG .. scaffold15679 Both SNP 0038.scaffold00149 868472 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 868501 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 868555 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 868562 1 A T scaffold15679 ScafM SNP 0038.scaffold00149 868564 1 A T scaffold15679 ScafM SNP 0038.scaffold00149 868569 1 T G scaffold15679 ScafM SNP 0038.scaffold00149 868573 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 868604 1 T C scaffold15679 ScafM INDEL 0038.scaffold00149 869025 1 A . scaffold15679 ScafM SNP 0038.scaffold00149 869053 1 C T scaffold15679 Both SNP 0038.scaffold00149 869096 1 C T scaffold15679 ScafM INDEL 0038.scaffold00149 869129 1 T . scaffold15679 ScafM SNP 0038.scaffold00149 869217 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 869240 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 869275 1 G T scaffold15679 ScafM SNP 0038.scaffold00149 869279 1 A G scaffold15679 Both SNP 0038.scaffold00149 869426 1 T A scaffold15679 Both SNP 0038.scaffold00149 869453 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 869508 1 T C scaffold15679 ScafM SNP 0038.scaffold00149 869512 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 869533 2 GG CA scaffold15679 ScafM INDEL 0038.scaffold00149 869571 9 TTCATACCA ......... scaffold15679 ScafM INDEL 0038.scaffold00149 869582 12 TAAGAATTATTT ............ scaffold15679 ScafM SNP 0038.scaffold00149 869612 1 A G scaffold15679 Both SNP 0038.scaffold00149 869646 1 C A scaffold15679 Both SNP 0038.scaffold00149 869736 1 A G scaffold15679 Both SNP 0038.scaffold00149 869752 1 C A scaffold15679 Both SNP 0038.scaffold00149 869756 1 T G scaffold15679 Both SNP 0038.scaffold00149 869850 1 G A scaffold15679 Both SNP 0038.scaffold00149 869875 1 G C scaffold15679 Both SNP 0038.scaffold00149 869934 1 C G scaffold15679 Both SNP 0038.scaffold00149 869994 1 T C scaffold15679 Both SNP 0038.scaffold00149 870013 1 C A scaffold15679 Both SNP 0038.scaffold00149 870024 1 C T scaffold15679 ScafM INDEL 0038.scaffold00149 870225 10 .......... AGAAAAAAAA scaffold15679 ScafM INDEL 0038.scaffold00149 870229 1 . G scaffold15679 ScafM SNP 0038.scaffold00149 870249 1 A T scaffold15679 ScafM INDEL 0038.scaffold00149 870282 2 GG .A scaffold15679 ScafM SNP 0038.scaffold00149 872166 1 A G scaffold15679 ScafM SNP 0038.scaffold00149 872181 2 CA TT scaffold15679 ScafM INDEL 0038.scaffold00149 872202 1 . A scaffold15679 ScafM SNP 0038.scaffold00149 872211 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 872234 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 872292 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 872317 1 C T scaffold15679 ScafM SNP 0038.scaffold00149 872329 1 T A scaffold15679 ScafM SNP 0038.scaffold00149 872337 1 C A scaffold15679 ScafM SNP 0038.scaffold00149 872347 1 G A scaffold15679 ScafM SNP 0038.scaffold00149 873586 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 873679 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 873729 1 A . scaffold1815 ScafM SNP 0038.scaffold00149 873747 1 A G scaffold1815 ScafM INDEL 0038.scaffold00149 873752 1 . A scaffold1815 ScafM SNP 0038.scaffold00149 873761 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 873780 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 873797 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 873840 1 C T scaffold1815 ReadM SNP 0038.scaffold00149 873893 1 C A - Both INDEL 0038.scaffold00149 873958 1 C . scaffold1815 ScafM SNP 0038.scaffold00149 874002 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 874008 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 874027 1 A . scaffold1815 Both SNP 0038.scaffold00149 874107 1 T C scaffold1815 Both SNP 0038.scaffold00149 874129 1 A G scaffold1815 Both SNP 0038.scaffold00149 874204 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 874254 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 874262 1 C A scaffold1815 ScafM SNP 0038.scaffold00149 874275 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 874304 1 A G scaffold1815 ScafM INDEL 0038.scaffold00149 874308 2 TT .. scaffold1815 ScafM INDEL 0038.scaffold00149 874327 1 G . scaffold1815 ScafM SNP 0038.scaffold00149 874340 1 G T scaffold1815 ScafM SNP 0038.scaffold00149 874375 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 874399 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 874418 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 874427 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 874485 1 T A scaffold1815 Both INDEL 0038.scaffold00149 874487 2 .. TT scaffold1815 ReadM SNP 0038.scaffold00149 874588 1 C T - Both SNP 0038.scaffold00149 874697 1 G A scaffold1815 Both SNP 0038.scaffold00149 874756 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 874825 2 CT AA scaffold1815 ScafM SNP 0038.scaffold00149 874838 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 874845 1 A T scaffold1815 ScafM INDEL 0038.scaffold00149 874856 12 ............ GTGGGTGTGGGT scaffold1815 ScafM SNP 0038.scaffold00149 874876 1 C A scaffold1815 ScafM SNP 0038.scaffold00149 874889 1 G T scaffold1815 ReadM SNP 0038.scaffold00149 875052 1 A G - ReadM SNP 0038.scaffold00149 875121 1 T G - ReadM SNP 0038.scaffold00149 875162 1 A G - ScafM SNP 0038.scaffold00149 875314 1 G A scaffold1815 ScafM INDEL 0038.scaffold00149 875359 2 .. AC scaffold1815 ScafM SNP 0038.scaffold00149 875367 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 875372 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 875582 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 875602 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 875607 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 875679 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 875686 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 875707 1 A T scaffold1815 ScafM SNP 0038.scaffold00149 875715 1 C A scaffold1815 ScafM INDEL 0038.scaffold00149 875716 3 ... TTT scaffold1815 ScafM SNP 0038.scaffold00149 875769 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 875787 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 875797 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 875847 1 A T scaffold1815 ScafM INDEL 0038.scaffold00149 875967 1 G . scaffold1815 ScafM SNP 0038.scaffold00149 875970 1 A T scaffold1815 ScafM SNP 0038.scaffold00149 875974 1 C G scaffold1815 ScafM SNP 0038.scaffold00149 875977 2 AG TT scaffold1815 ScafM INDEL 0038.scaffold00149 876032 1 C . scaffold1815 ScafM SNP 0038.scaffold00149 876034 1 C T scaffold1815 ReadM SNP 0038.scaffold00149 876196 1 C A - ReadM INDEL 0038.scaffold00149 876310 1 A . - ReadM SNP 0038.scaffold00149 876377 1 C T - ReadM INDEL 0038.scaffold00149 876383 1 . T - ReadM SNP 0038.scaffold00149 876533 1 T C - ReadM SNP 0038.scaffold00149 876581 1 A G - ReadM SNP 0038.scaffold00149 877015 1 C T - ReadM SNP 0038.scaffold00149 877074 1 A T - ScafM SNP 0038.scaffold00149 877265 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 877286 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 877296 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 877298 1 C G scaffold1815 ScafM SNP 0038.scaffold00149 877348 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 877435 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 877452 1 T G scaffold1815 ScafM SNP 0038.scaffold00149 877462 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 877467 1 T C scaffold1815 ScafM INDEL 0038.scaffold00149 877653 1 . A scaffold1815 ScafM SNP 0038.scaffold00149 877655 1 G C scaffold1815 ScafM SNP 0038.scaffold00149 877688 1 A G scaffold1815 ScafM INDEL 0038.scaffold00149 877784 3 ... AAA scaffold1815 ScafM SNP 0038.scaffold00149 877817 1 G T scaffold1815 ScafM SNP 0038.scaffold00149 877822 1 G A scaffold1815 ScafM INDEL 0038.scaffold00149 877843 12 ............ AGTTGCCATACT scaffold1815 ScafM INDEL 0038.scaffold00149 877844 7 ....... CCATATT scaffold1815 ScafM INDEL 0038.scaffold00149 877845 5 ..... CCATA scaffold1815 ScafM INDEL 0038.scaffold00149 877906 1 T . scaffold1815 ScafM INDEL 0038.scaffold00149 878679 1 . T scaffold1815 ReadM SNP 0038.scaffold00149 878710 1 A C - ReadM SNP 0038.scaffold00149 878748 1 T C - ReadM SNP 0038.scaffold00149 878769 1 G A - ReadM SNP 0038.scaffold00149 878851 1 G A - ReadM SNP 0038.scaffold00149 878884 1 G A - ReadM SNP 0038.scaffold00149 878929 1 A G - ReadM SNP 0038.scaffold00149 878941 1 T G - ScafM SNP 0038.scaffold00149 879083 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 879424 6 ATATTT ...... scaffold1815 ScafM INDEL 0038.scaffold00149 879431 3 ACA ... scaffold1815 ScafM SNP 0038.scaffold00149 879443 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 879469 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 879564 1 . T scaffold1815 ScafM SNP 0038.scaffold00149 879650 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 879756 1 A T scaffold1815 ScafM SNP 0038.scaffold00149 879949 1 G T scaffold1815 ScafM SNP 0038.scaffold00149 879984 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 879993 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 880009 2 AA TG scaffold1815 ScafM SNP 0038.scaffold00149 880433 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 880438 1 G A scaffold1815 ReadM SNP 0038.scaffold00149 880892 1 C A - ReadM SNP 0038.scaffold00149 880907 1 A G - ReadM SNP 0038.scaffold00149 880941 1 G A - ReadM SNP 0038.scaffold00149 881174 1 G T - ReadM SNP 0038.scaffold00149 881201 1 G A - ReadM SNP 0038.scaffold00149 881222 1 G A - ReadM SNP 0038.scaffold00149 881273 1 G A - ReadM SNP 0038.scaffold00149 881354 1 T C - ReadM SNP 0038.scaffold00149 881399 1 C T - ReadM SNP 0038.scaffold00149 881487 1 G T - ReadM SNP 0038.scaffold00149 881523 1 G A - ReadM SNP 0038.scaffold00149 881531 1 T C - ReadM SNP 0038.scaffold00149 881681 1 C T - ReadM SNP 0038.scaffold00149 881708 1 C T - ReadM SNP 0038.scaffold00149 881770 1 C T - ReadM SNP 0038.scaffold00149 881800 1 A G - ReadM SNP 0038.scaffold00149 881835 1 T A - ReadM SNP 0038.scaffold00149 881861 1 C T - ReadM SNP 0038.scaffold00149 881891 1 A T - ReadM SNP 0038.scaffold00149 882078 1 A G - ReadM SNP 0038.scaffold00149 882112 1 A C - ReadM SNP 0038.scaffold00149 882153 1 A C - ReadM SNP 0038.scaffold00149 882417 1 T C - ReadM SNP 0038.scaffold00149 882463 1 G A - ReadM SNP 0038.scaffold00149 882551 1 A G - ReadM SNP 0038.scaffold00149 882622 1 C A - ReadM SNP 0038.scaffold00149 882624 1 G T - ReadM SNP 0038.scaffold00149 882707 1 T C - ReadM SNP 0038.scaffold00149 882711 1 A G - ReadM SNP 0038.scaffold00149 882787 1 G A - ReadM SNP 0038.scaffold00149 882931 1 T G - ReadM SNP 0038.scaffold00149 882951 1 G T - Both SNP 0038.scaffold00149 883071 1 A G scaffold1815 Both SNP 0038.scaffold00149 883088 1 A G scaffold1815 ReadM SNP 0038.scaffold00149 883163 1 G A - ReadM SNP 0038.scaffold00149 883177 1 C T - ReadM SNP 0038.scaffold00149 883248 1 G A - ReadM SNP 0038.scaffold00149 883362 1 T C - ReadM SNP 0038.scaffold00149 883401 1 T C - ReadM SNP 0038.scaffold00149 883441 1 G T - Both SNP 0038.scaffold00149 883543 1 G A scaffold1815 Both SNP 0038.scaffold00149 883564 1 C T scaffold1815 ReadM SNP 0038.scaffold00149 883620 1 T G - ReadM SNP 0038.scaffold00149 883698 1 G A - ReadM SNP 0038.scaffold00149 883718 1 C G - ReadM SNP 0038.scaffold00149 883749 1 C T - ReadM INDEL 0038.scaffold00149 883812 1 . G - ReadM SNP 0038.scaffold00149 883835 1 T C - ReadM SNP 0038.scaffold00149 883923 1 G A - ReadM SNP 0038.scaffold00149 883977 1 T C - ReadM SNP 0038.scaffold00149 884026 1 A G - ReadM SNP 0038.scaffold00149 884038 1 G T - ReadM SNP 0038.scaffold00149 884122 1 C T - Both SNP 0038.scaffold00149 884144 1 G T scaffold1815 ScafM SNP 0038.scaffold00149 884154 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 884171 1 A G scaffold1815 Both SNP 0038.scaffold00149 884189 1 T A scaffold1815 Both SNP 0038.scaffold00149 884242 1 C T scaffold1815 Both SNP 0038.scaffold00149 884316 1 A C scaffold1815 Both SNP 0038.scaffold00149 884322 1 A G scaffold1815 Both SNP 0038.scaffold00149 884426 1 C T scaffold1815 Both SNP 0038.scaffold00149 884437 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 884506 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 884515 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 884568 44 TCCACAAGTGGATGTGTGTTTTTCTTGGAGGAGGTGCTATTTCA ............................................ scaffold1815 Both SNP 0038.scaffold00149 884701 1 A G scaffold1815 Both SNP 0038.scaffold00149 884713 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 884734 2 CT GG scaffold1815 ScafM SNP 0038.scaffold00149 884748 1 C A scaffold1815 Both SNP 0038.scaffold00149 884782 1 C T scaffold1815 Both SNP 0038.scaffold00149 884788 1 T C scaffold1815 Both SNP 0038.scaffold00149 884799 1 G A scaffold1815 Both SNP 0038.scaffold00149 884898 1 T C scaffold1815 Both SNP 0038.scaffold00149 884939 1 T A scaffold1815 Both SNP 0038.scaffold00149 885005 1 A G scaffold1815 ReadM SNP 0038.scaffold00149 885043 1 G A - ReadM SNP 0038.scaffold00149 885048 1 T C - ReadM SNP 0038.scaffold00149 885100 1 C T - ReadM SNP 0038.scaffold00149 885209 1 G A - ReadM SNP 0038.scaffold00149 885302 1 C T - ReadM SNP 0038.scaffold00149 885332 1 G A - ReadM SNP 0038.scaffold00149 885404 1 T G - ReadM SNP 0038.scaffold00149 885517 1 G A - ReadM SNP 0038.scaffold00149 885536 1 G A - ReadM SNP 0038.scaffold00149 885857 1 T C - ReadM SNP 0038.scaffold00149 886044 1 A G - ReadM SNP 0038.scaffold00149 886190 1 A T - Both SNP 0038.scaffold00149 886274 1 C T scaffold1815 Both SNP 0038.scaffold00149 886281 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 886394 1 T G scaffold1815 ScafM SNP 0038.scaffold00149 886397 1 G T scaffold1815 ScafM INDEL 0038.scaffold00149 886627 12 ............ AACAACAACAAC scaffold1815 ScafM SNP 0038.scaffold00149 886629 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 886670 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 886673 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 886680 1 T C scaffold1815 Both SNP 0038.scaffold00149 886700 1 C T scaffold1815 Both SNP 0038.scaffold00149 886759 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 887128 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 887183 5 ..... GCCGG scaffold1815 ScafM INDEL 0038.scaffold00149 887235 4 .... GATC scaffold1815 ScafM INDEL 0038.scaffold00149 887237 5 ..... GGAAA scaffold1815 ScafM INDEL 0038.scaffold00149 887239 3 ... ATA scaffold1815 ScafM INDEL 0038.scaffold00149 887240 1 . A scaffold1815 ScafM INDEL 0038.scaffold00149 887326 11 AAAAATTTATT ........... scaffold1815 ReadM SNP 0038.scaffold00149 888020 1 C T - ReadM SNP 0038.scaffold00149 888033 1 G A - ReadM INDEL 0038.scaffold00149 888641 1 A . - ReadM SNP 0038.scaffold00149 888730 1 T C - ScafM SNP 0038.scaffold00149 888787 1 T C scaffold1815 Both SNP 0038.scaffold00149 888865 1 C T scaffold1815 Both SNP 0038.scaffold00149 888892 1 G C scaffold1815 ScafM SNP 0038.scaffold00149 888948 1 C A scaffold1815 ScafM INDEL 0038.scaffold00149 888961 3 ... AAT scaffold1815 ScafM INDEL 0038.scaffold00149 888978 2 .. AA scaffold1815 ScafM SNP 0038.scaffold00149 888983 1 C T scaffold1815 ScafM INDEL 0038.scaffold00149 888990 1 . A scaffold1815 ScafM INDEL 0038.scaffold00149 889046 1 A . scaffold1815 ScafM SNP 0038.scaffold00149 889053 1 T C scaffold1815 Both SNP 0038.scaffold00149 889114 1 C G scaffold1815 Both SNP 0038.scaffold00149 889126 1 C A scaffold1815 Both SNP 0038.scaffold00149 889161 1 C A scaffold1815 Both INDEL 0038.scaffold00149 889208 1 T . scaffold1815 Both SNP 0038.scaffold00149 889316 1 C T scaffold1815 Both SNP 0038.scaffold00149 889414 1 C T scaffold1815 Both SNP 0038.scaffold00149 889427 1 G T scaffold1815 ScafM SNP 0038.scaffold00149 889471 1 C A scaffold1815 ScafM SNP 0038.scaffold00149 889513 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 889534 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 889561 1 G T scaffold1815 ScafM INDEL 0038.scaffold00149 889758 1 A . scaffold1815 ScafM INDEL 0038.scaffold00149 889769 3 ... ATA scaffold1815 ReadM SNP 0038.scaffold00149 890202 1 G T - ReadM SNP 0038.scaffold00149 890780 1 C T - ReadM SNP 0038.scaffold00149 890796 1 A G - ScafM SNP 0038.scaffold00149 892984 1 G A scaffold1815 ScafM INDEL 0038.scaffold00149 893018 4 .... AAAT scaffold1815 ScafM SNP 0038.scaffold00149 893062 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 893072 1 T G scaffold1815 ReadM SNP 0038.scaffold00149 893544 1 G C - ReadM SNP 0038.scaffold00149 893594 1 G C - ReadM SNP 0038.scaffold00149 893749 1 T A - ReadM SNP 0038.scaffold00149 893791 1 T C - ReadM SNP 0038.scaffold00149 893917 1 G A - ReadM SNP 0038.scaffold00149 893960 1 G A - ReadM SNP 0038.scaffold00149 893990 1 C T - ReadM SNP 0038.scaffold00149 894191 1 G A - ReadM SNP 0038.scaffold00149 894239 1 G A - ReadM SNP 0038.scaffold00149 894308 1 A G - ReadM INDEL 0038.scaffold00149 894361 1 . G - ReadM SNP 0038.scaffold00149 894372 1 C T - ReadM SNP 0038.scaffold00149 894451 1 C T - ReadM SNP 0038.scaffold00149 894486 1 A C - ReadM SNP 0038.scaffold00149 894526 1 C T - ReadM SNP 0038.scaffold00149 894917 1 G C - ReadM SNP 0038.scaffold00149 894930 1 C T - ReadM INDEL 0038.scaffold00149 894978 1 . T - ReadM SNP 0038.scaffold00149 895021 1 A G - ReadM SNP 0038.scaffold00149 895175 1 C T - ReadM SNP 0038.scaffold00149 895217 1 G A - ReadM SNP 0038.scaffold00149 895268 1 A G - ReadM SNP 0038.scaffold00149 895304 1 C A - ReadM SNP 0038.scaffold00149 895316 1 T C - ReadM SNP 0038.scaffold00149 895435 1 T A - ReadM SNP 0038.scaffold00149 895625 1 T C - ReadM SNP 0038.scaffold00149 895639 1 G T - ReadM SNP 0038.scaffold00149 895676 1 T G - ReadM SNP 0038.scaffold00149 895951 1 G C - ReadM SNP 0038.scaffold00149 897469 1 C G - ReadM SNP 0038.scaffold00149 897495 1 C A - ReadM SNP 0038.scaffold00149 899028 1 A G - ReadM SNP 0038.scaffold00149 899090 1 A T - ReadM SNP 0038.scaffold00149 899130 1 T G - ReadM SNP 0038.scaffold00149 899226 1 A T - ReadM SNP 0038.scaffold00149 899235 1 G T - ReadM SNP 0038.scaffold00149 899252 1 C T - ReadM SNP 0038.scaffold00149 899282 1 G C - ReadM SNP 0038.scaffold00149 899303 1 T C - ReadM SNP 0038.scaffold00149 899365 1 T G - ReadM SNP 0038.scaffold00149 899428 1 T A - ReadM INDEL 0038.scaffold00149 899504 1 . A - ReadM SNP 0038.scaffold00149 899520 1 G A - ReadM SNP 0038.scaffold00149 899620 1 C G - ReadM SNP 0038.scaffold00149 899650 1 G A - ReadM SNP 0038.scaffold00149 899754 1 T C - ReadM SNP 0038.scaffold00149 899835 1 C T - ReadM SNP 0038.scaffold00149 899876 1 T C - ReadM SNP 0038.scaffold00149 899997 1 A T - ReadM SNP 0038.scaffold00149 900004 1 G T - ReadM SNP 0038.scaffold00149 900070 1 A C - ReadM SNP 0038.scaffold00149 900089 1 A T - ReadM SNP 0038.scaffold00149 900554 1 A T - ReadM SNP 0038.scaffold00149 900559 1 A T - ReadM SNP 0038.scaffold00149 900630 1 T C - ReadM SNP 0038.scaffold00149 900649 1 A T - ReadM SNP 0038.scaffold00149 900715 1 C T - ReadM SNP 0038.scaffold00149 900797 1 A G - ReadM SNP 0038.scaffold00149 900831 1 T C - ReadM SNP 0038.scaffold00149 900846 1 C T - ReadM SNP 0038.scaffold00149 900958 1 A C - ReadM SNP 0038.scaffold00149 901032 1 C A - ReadM SNP 0038.scaffold00149 901094 1 G A - ReadM SNP 0038.scaffold00149 901132 1 G A - ReadM SNP 0038.scaffold00149 901137 1 C A - ScafM SNP 0038.scaffold00149 901975 1 A C scaffold1815 ScafM SNP 0038.scaffold00149 901982 1 T A scaffold1815 ScafM SNP 0038.scaffold00149 902022 1 T C scaffold1815 ScafM SNP 0038.scaffold00149 902056 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 902070 1 C T scaffold1815 ScafM SNP 0038.scaffold00149 902093 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 902098 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 902127 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 902166 1 A G scaffold1815 ScafM SNP 0038.scaffold00149 902176 1 G A scaffold1815 ScafM SNP 0038.scaffold00149 902266 1 A G scaffold1815 ReadM SNP 0038.scaffold00149 903604 1 A G - ScafM SNP 0038.scaffold00149 903935 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 903963 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 903982 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 904027 1 A . scaffold1721 ScafM SNP 0038.scaffold00149 904056 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 904092 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 904205 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 904208 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 904251 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 904282 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904302 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 904346 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904372 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 904401 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 904571 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904681 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 904694 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904700 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 904720 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 904758 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 904797 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904818 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 904827 1 T C scaffold1721 ReadM INDEL 0038.scaffold00149 904910 1 A . - ScafM SNP 0038.scaffold00149 904957 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 904973 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 904990 2 GT AC scaffold1721 ScafM SNP 0038.scaffold00149 905023 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 905057 27 CAACATAAATTTTGTTTTTATTTGATT ........................... scaffold1721 ScafM INDEL 0038.scaffold00149 905085 8 ACATTTAT ........ scaffold1721 ScafM SNP 0038.scaffold00149 905106 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 905108 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 905148 1 G A scaffold1721 Both SNP 0038.scaffold00149 905172 1 C T scaffold1721 Both SNP 0038.scaffold00149 905276 1 G T scaffold1721 Both SNP 0038.scaffold00149 905317 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 905403 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 905406 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 905411 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 905442 2 TT CA scaffold1721 ScafM SNP 0038.scaffold00149 905449 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 905468 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 905473 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 905548 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 905578 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 905625 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 905653 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 905662 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 905670 1 A . scaffold1721 ScafM SNP 0038.scaffold00149 905688 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 905693 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 905731 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 905758 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 905835 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 905853 1 C A scaffold1721 ScafM INDEL 0038.scaffold00149 905910 1 . T scaffold1721 ScafM INDEL 0038.scaffold00149 905954 7 ATTCAAC ....... scaffold1721 ScafM SNP 0038.scaffold00149 905985 1 A C scaffold1721 ScafM INDEL 0038.scaffold00149 911842 2 AT .G scaffold1721 ScafM SNP 0038.scaffold00149 911913 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 911931 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 912015 2 AA CT scaffold1721 ScafM SNP 0038.scaffold00149 912051 1 A G scaffold1721 Both SNP 0038.scaffold00149 912193 1 G A scaffold1721 ReadM INDEL 0038.scaffold00149 912509 1 . C - ReadM SNP 0038.scaffold00149 912519 1 G C - ReadM SNP 0038.scaffold00149 912575 1 A C - ReadM SNP 0038.scaffold00149 912739 1 A T - ReadM SNP 0038.scaffold00149 912755 1 T G - Both SNP 0038.scaffold00149 912894 1 A G scaffold1721 Both SNP 0038.scaffold00149 912904 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 912923 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 912931 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 912935 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 912938 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 912949 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 912988 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 913021 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 913027 1 A G scaffold1721 ReadM SNP 0038.scaffold00149 913128 1 G T - ReadM SNP 0038.scaffold00149 913132 1 G A - ReadM SNP 0038.scaffold00149 913216 1 C A - ReadM SNP 0038.scaffold00149 913312 1 A G - ReadM INDEL 0038.scaffold00149 913346 1 . A - ReadM INDEL 0038.scaffold00149 913436 1 . A - ReadM SNP 0038.scaffold00149 913589 1 T C - ReadM SNP 0038.scaffold00149 913602 1 A G - ReadM SNP 0038.scaffold00149 913764 1 A G - ReadM SNP 0038.scaffold00149 913806 1 T C - ReadM INDEL 0038.scaffold00149 913839 1 . G - ReadM SNP 0038.scaffold00149 913848 1 T G - ReadM SNP 0038.scaffold00149 914077 1 C T - ReadM SNP 0038.scaffold00149 914205 1 A C - ReadM SNP 0038.scaffold00149 914208 1 C T - Both SNP 0038.scaffold00149 914236 1 A G scaffold1721 ReadM SNP 0038.scaffold00149 914333 1 T C - ReadM SNP 0038.scaffold00149 914369 1 G A - ScafM SNP 0038.scaffold00149 914422 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 914429 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 914452 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 914462 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 914464 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 914484 4 .... TTTG scaffold1721 ScafM SNP 0038.scaffold00149 914494 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 914536 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 914539 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914549 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 914557 9 GGTTATCAC ......... scaffold1721 ScafM SNP 0038.scaffold00149 914571 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 914575 2 .T AA scaffold1721 ScafM SNP 0038.scaffold00149 914578 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 914581 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 914583 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 914593 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914604 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 914606 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914619 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914643 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 914646 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914648 1 A T scaffold1721 Both SNP 0038.scaffold00149 914684 1 A T scaffold1721 Both SNP 0038.scaffold00149 914741 1 C A scaffold1721 Both SNP 0038.scaffold00149 914749 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 914798 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 914806 1 T A scaffold1721 Both SNP 0038.scaffold00149 915370 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 915415 2 TG CA scaffold1721 ScafM SNP 0038.scaffold00149 915454 2 CA AT scaffold1721 ScafM INDEL 0038.scaffold00149 915456 2 .C AA scaffold1721 ScafM SNP 0038.scaffold00149 915480 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 915525 2 AC GT scaffold1721 ScafM SNP 0038.scaffold00149 915531 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 915562 1 C . scaffold1721 ScafM SNP 0038.scaffold00149 915830 1 A G scaffold1721 Both SNP 0038.scaffold00149 915866 1 G A scaffold1721 Both SNP 0038.scaffold00149 915917 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 915978 2 GT TC scaffold1721 ScafM SNP 0038.scaffold00149 916023 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 916025 1 G A scaffold1721 Both SNP 0038.scaffold00149 916049 1 T C scaffold1721 Both SNP 0038.scaffold00149 916098 1 G A scaffold1721 Both SNP 0038.scaffold00149 916153 1 C A scaffold1721 Both SNP 0038.scaffold00149 916189 1 T C scaffold1721 Both SNP 0038.scaffold00149 916300 1 A G scaffold1721 Both SNP 0038.scaffold00149 916385 1 C A scaffold1721 Both SNP 0038.scaffold00149 916431 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 916461 1 A . scaffold1721 ScafM SNP 0038.scaffold00149 916473 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 916496 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 916522 3 TAC ... scaffold1721 ScafM SNP 0038.scaffold00149 916546 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 916591 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 916668 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 916678 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 916702 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 916711 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 916753 1 . T scaffold1721 ScafM INDEL 0038.scaffold00149 916760 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 922586 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 922593 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 922596 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 922599 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 922602 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 922632 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 922664 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 922667 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 922709 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 922828 3 TGT ... scaffold1721 ScafM SNP 0038.scaffold00149 922835 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 922879 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 922888 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 922911 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 922954 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 922982 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 932508 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 932551 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 932577 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 932581 2 AC TT scaffold1721 ScafM SNP 0038.scaffold00149 932584 2 AC GT scaffold1721 ScafM SNP 0038.scaffold00149 932589 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 932591 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 932606 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 932616 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 932636 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 932640 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 932642 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 932651 2 TT CC scaffold1721 ScafM SNP 0038.scaffold00149 932677 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 932731 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 932745 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 932753 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 932765 1 C A scaffold1721 Both SNP 0038.scaffold00149 932813 1 T C scaffold1721 Both SNP 0038.scaffold00149 932876 1 G A scaffold1721 Both SNP 0038.scaffold00149 932921 1 C T scaffold1721 Both SNP 0038.scaffold00149 932998 1 G A scaffold1721 Both SNP 0038.scaffold00149 933007 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 933031 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 933034 1 . A scaffold1721 Both SNP 0038.scaffold00149 933056 1 A C scaffold1721 Both SNP 0038.scaffold00149 933126 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 933225 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 933270 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 933274 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 933293 1 C A scaffold1721 ReadM SNP 0038.scaffold00149 934385 1 G C - ReadM SNP 0038.scaffold00149 934478 1 T C - ReadM SNP 0038.scaffold00149 934488 1 C T - ReadM SNP 0038.scaffold00149 934727 1 T C - ReadM SNP 0038.scaffold00149 934755 1 A G - ReadM SNP 0038.scaffold00149 934923 1 T C - ReadM SNP 0038.scaffold00149 934927 1 T A - ReadM SNP 0038.scaffold00149 935158 1 T C - ReadM SNP 0038.scaffold00149 935182 1 G A - ReadM SNP 0038.scaffold00149 937701 1 C T - ReadM SNP 0038.scaffold00149 937714 1 T G - ScafM SNP 0038.scaffold00149 937935 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 937942 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 937955 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 937984 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 938007 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 938019 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 938024 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 938026 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 938035 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 938048 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 938052 1 A G scaffold1721 Both SNP 0038.scaffold00149 938067 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 938250 2 .. TA scaffold1721 ScafM SNP 0038.scaffold00149 938264 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 938282 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 938293 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 938307 2 CA TG scaffold1721 Both SNP 0038.scaffold00149 938391 1 A G scaffold1721 Both SNP 0038.scaffold00149 938472 1 A G scaffold1721 Both SNP 0038.scaffold00149 938480 1 G A scaffold1721 Both SNP 0038.scaffold00149 938533 1 A G scaffold1721 Both SNP 0038.scaffold00149 938551 1 T C scaffold1721 Both SNP 0038.scaffold00149 938579 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 938609 1 . A scaffold1721 ScafM SNP 0038.scaffold00149 938613 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 938676 2 GT AG scaffold1721 Both SNP 0038.scaffold00149 938704 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 938724 1 C G scaffold1721 Both SNP 0038.scaffold00149 938734 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 938813 2 TA .. scaffold1721 ScafM SNP 0038.scaffold00149 938839 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 938848 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 938876 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 938901 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 938908 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 938945 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 938947 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 938957 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 938961 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 938977 2 TG AA scaffold1721 Both SNP 0038.scaffold00149 939001 1 T G scaffold1721 Both SNP 0038.scaffold00149 939073 1 T C scaffold1721 Both SNP 0038.scaffold00149 939102 1 G A scaffold1721 Both INDEL 0038.scaffold00149 939104 1 G . scaffold1721 ScafM SNP 0038.scaffold00149 939200 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 939207 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 939252 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 939255 1 C T scaffold1721 Both SNP 0038.scaffold00149 939282 1 A G scaffold1721 Both SNP 0038.scaffold00149 939300 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 939424 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 939433 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 939435 1 A C scaffold1721 Both SNP 0038.scaffold00149 939463 1 T C scaffold1721 Both SNP 0038.scaffold00149 939530 1 G A scaffold1721 Both SNP 0038.scaffold00149 939546 1 G A scaffold1721 Both SNP 0038.scaffold00149 939631 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 939641 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 939668 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 939670 1 G A scaffold1721 Both INDEL 0038.scaffold00149 939724 3 TAA ... scaffold1721 ReadM INDEL 0038.scaffold00149 939806 1 A . - ReadM SNP 0038.scaffold00149 939814 1 T A - ReadM SNP 0038.scaffold00149 939864 1 T C - ReadM SNP 0038.scaffold00149 939891 1 T A - Both SNP 0038.scaffold00149 939981 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 940009 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 940019 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 940028 1 A G scaffold1721 ReadM SNP 0038.scaffold00149 940121 1 T C - ReadM INDEL 0038.scaffold00149 940141 1 A . - ScafM SNP 0038.scaffold00149 940237 2 GC AG scaffold1721 ReadM SNP 0038.scaffold00149 940360 1 A T - ReadM SNP 0038.scaffold00149 940373 1 A G - ReadM SNP 0038.scaffold00149 940438 1 C A - ReadM INDEL 0038.scaffold00149 940491 1 . T - ReadM SNP 0038.scaffold00149 940570 1 G A - ReadM SNP 0038.scaffold00149 940640 1 A G - ReadM SNP 0038.scaffold00149 940660 1 C A - Both SNP 0038.scaffold00149 940710 1 G A scaffold1721 Both SNP 0038.scaffold00149 940756 1 A G scaffold1721 ReadM SNP 0038.scaffold00149 940824 1 T C - ReadM SNP 0038.scaffold00149 941139 1 G C - ReadM SNP 0038.scaffold00149 941260 1 G C - ReadM SNP 0038.scaffold00149 941425 1 T C - ReadM SNP 0038.scaffold00149 941458 1 A G - ReadM SNP 0038.scaffold00149 941622 1 T A - ReadM SNP 0038.scaffold00149 941652 1 C G - ReadM SNP 0038.scaffold00149 941659 1 A G - ReadM SNP 0038.scaffold00149 941777 1 T C - ReadM SNP 0038.scaffold00149 941853 1 T C - ReadM SNP 0038.scaffold00149 941987 1 C T - ReadM SNP 0038.scaffold00149 942023 1 G T - ReadM INDEL 0038.scaffold00149 942054 1 . T - ReadM SNP 0038.scaffold00149 942090 1 G C - ReadM SNP 0038.scaffold00149 942190 1 T C - ReadM SNP 0038.scaffold00149 942225 1 C G - ReadM SNP 0038.scaffold00149 942236 1 T G - ReadM SNP 0038.scaffold00149 942322 1 A G - ReadM SNP 0038.scaffold00149 942339 1 A G - ReadM SNP 0038.scaffold00149 942383 1 G A - ReadM SNP 0038.scaffold00149 942441 1 C T - ReadM SNP 0038.scaffold00149 942582 1 A T - ReadM SNP 0038.scaffold00149 942600 2 TG CA - ReadM SNP 0038.scaffold00149 942656 1 C A - ReadM SNP 0038.scaffold00149 942747 1 G T - ReadM SNP 0038.scaffold00149 942757 1 C A - ReadM SNP 0038.scaffold00149 943019 1 A C - ReadM SNP 0038.scaffold00149 943062 1 C T - ReadM SNP 0038.scaffold00149 943185 1 C A - ReadM SNP 0038.scaffold00149 943200 1 C T - ReadM SNP 0038.scaffold00149 943244 1 G A - ReadM SNP 0038.scaffold00149 943271 1 A G - ReadM SNP 0038.scaffold00149 943585 1 C T - ReadM SNP 0038.scaffold00149 943596 1 G T - ReadM SNP 0038.scaffold00149 943695 1 A G - ReadM SNP 0038.scaffold00149 943731 1 A G - ReadM INDEL 0038.scaffold00149 943734 1 . G - ReadM SNP 0038.scaffold00149 944178 1 C T - ReadM SNP 0038.scaffold00149 944224 1 G A - ReadM SNP 0038.scaffold00149 944240 1 A G - ReadM SNP 0038.scaffold00149 944404 1 C A - ReadM SNP 0038.scaffold00149 944414 1 T C - ReadM SNP 0038.scaffold00149 944474 1 A G - ReadM SNP 0038.scaffold00149 944493 1 G A - ReadM SNP 0038.scaffold00149 944540 1 T C - ReadM SNP 0038.scaffold00149 944733 1 T C - ReadM SNP 0038.scaffold00149 944738 1 T A - ReadM SNP 0038.scaffold00149 944777 1 A G - ReadM SNP 0038.scaffold00149 944823 1 G C - ReadM SNP 0038.scaffold00149 945019 1 T C - ReadM SNP 0038.scaffold00149 945065 1 C T - ReadM SNP 0038.scaffold00149 945072 1 A G - ReadM INDEL 0038.scaffold00149 945163 1 G . - ReadM SNP 0038.scaffold00149 945221 1 T C - ReadM SNP 0038.scaffold00149 945374 1 C T - ReadM SNP 0038.scaffold00149 945383 1 T A - ReadM SNP 0038.scaffold00149 945435 1 T C - ReadM SNP 0038.scaffold00149 945626 1 A G - ScafM SNP 0038.scaffold00149 946448 1 T G scaffold7667 ScafM SNP 0038.scaffold00149 946478 1 C G scaffold7667 ScafM SNP 0038.scaffold00149 946509 1 C G scaffold7667 ScafM SNP 0038.scaffold00149 946517 1 T C scaffold7667 ScafM SNP 0038.scaffold00149 946532 1 T C scaffold7667 ScafM SNP 0038.scaffold00149 946541 1 A G scaffold7667 ScafM SNP 0038.scaffold00149 946558 1 T C scaffold7667 ScafM SNP 0038.scaffold00149 946560 1 C A scaffold7667 ScafM SNP 0038.scaffold00149 946572 1 A G scaffold7667 ScafM SNP 0038.scaffold00149 946577 1 T C scaffold7667 ScafM INDEL 0038.scaffold00149 946630 1 . T scaffold7667 ScafM INDEL 0038.scaffold00149 946643 1 A . scaffold7667 ScafM SNP 0038.scaffold00149 946661 1 T C scaffold7667 ScafM INDEL 0038.scaffold00149 946669 1 . T scaffold7667 ScafM SNP 0038.scaffold00149 946674 1 A C scaffold7667 ScafM SNP 0038.scaffold00149 946694 1 G A scaffold7667 ScafM SNP 0038.scaffold00149 946756 1 A G scaffold7667 ScafM SNP 0038.scaffold00149 946760 1 A C scaffold7667 ScafM INDEL 0038.scaffold00149 946765 1 G . scaffold7667 ScafM INDEL 0038.scaffold00149 946767 1 C . scaffold7667 ScafM INDEL 0038.scaffold00149 946769 1 G . scaffold7667 ScafM INDEL 0038.scaffold00149 946773 3 TGG ... scaffold7667 ScafM SNP 0038.scaffold00149 946777 1 G A scaffold7667 ScafM SNP 0038.scaffold00149 946782 1 T C scaffold7667 ScafM INDEL 0038.scaffold00149 946815 1 . A scaffold7667 ScafM SNP 0038.scaffold00149 946817 2 TT AA scaffold7667 ScafM SNP 0038.scaffold00149 946825 1 A C scaffold7667 ScafM INDEL 0038.scaffold00149 946827 1 A . scaffold7667 ScafM SNP 0038.scaffold00149 946839 1 A C scaffold7667 ScafM SNP 0038.scaffold00149 946843 2 CC AA scaffold7667 ScafM INDEL 0038.scaffold00149 946848 2 .. TA scaffold7667 ScafM SNP 0038.scaffold00149 946849 1 C A scaffold7667 ScafM SNP 0038.scaffold00149 946921 1 G A scaffold7667 ScafM SNP 0038.scaffold00149 946923 1 A G scaffold7667 ScafM SNP 0038.scaffold00149 946929 1 A G scaffold7667 ScafM SNP 0038.scaffold00149 946960 1 G A scaffold7667 ScafM SNP 0038.scaffold00149 947001 1 T C scaffold7667 ScafM SNP 0038.scaffold00149 947155 1 C G scaffold3532 ScafM SNP 0038.scaffold00149 947193 1 T G scaffold3532 ScafM INDEL 0038.scaffold00149 947208 45 ............................................. GAGGGTGTAAGGTTGTGACTTCGTCGGAGGCTCCAGAAAGAAAGC scaffold3532 ScafM INDEL 0038.scaffold00149 947212 24 ........................ ACGACGATCATCCAATGTGTGGCA scaffold3532 ScafM SNP 0038.scaffold00149 947239 1 G A scaffold3532 ScafM SNP 0038.scaffold00149 948594 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 948627 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 948648 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 948672 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 948693 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 948715 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 948743 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 948781 1 . T scaffold1721 ScafM SNP 0038.scaffold00149 948818 2 CA TT scaffold1721 ScafM SNP 0038.scaffold00149 948826 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 948840 1 T A scaffold1721 Both SNP 0038.scaffold00149 948930 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 948997 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 949013 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 949043 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 949069 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 949080 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 949095 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 949119 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949127 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949200 2 AG TC scaffold1721 ScafM INDEL 0038.scaffold00149 949216 5 ..... CGGCC scaffold1721 ScafM INDEL 0038.scaffold00149 949220 35 ................................... TTTATGCTGAGGAGGCGGTGCATTCATTTCATGTA scaffold1721 ScafM INDEL 0038.scaffold00149 949222 1 . T scaffold1721 ScafM INDEL 0038.scaffold00149 949224 2 .. TA scaffold1721 ScafM INDEL 0038.scaffold00149 949225 7 ....... AGTTTGA scaffold1721 ScafM INDEL 0038.scaffold00149 949226 7 ....... TTGGAAA scaffold1721 ScafM SNP 0038.scaffold00149 949242 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 949259 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 949292 2 CG TC scaffold1721 ScafM INDEL 0038.scaffold00149 949335 8 ........ ATTTATAT scaffold1721 ScafM SNP 0038.scaffold00149 949371 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 949385 2 .. AC scaffold1721 ScafM SNP 0038.scaffold00149 949419 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 949486 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 949715 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 949724 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949732 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949747 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949749 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 949753 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 949808 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 949811 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 949830 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 949837 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 949886 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 949895 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 949938 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 949958 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 949981 1 G C scaffold1721 ScafM INDEL 0038.scaffold00149 950018 3 ... AAC scaffold1721 ScafM SNP 0038.scaffold00149 950025 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 950054 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 950056 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 950101 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 950136 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 950160 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 950208 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 950211 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 950216 1 . A scaffold1721 ScafM SNP 0038.scaffold00149 950220 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 950277 4 TTTT .... scaffold1721 ScafM SNP 0038.scaffold00149 950286 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 950316 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 950394 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 950428 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 950431 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 950564 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 950602 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 950608 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 950612 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 950616 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 950641 5 CACCT ..... scaffold1721 ScafM SNP 0038.scaffold00149 950651 1 G C scaffold1721 ScafM INDEL 0038.scaffold00149 950662 2 AT .. scaffold1721 ScafM SNP 0038.scaffold00149 950700 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 950728 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 950756 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 950827 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 950852 1 . A scaffold1721 ScafM SNP 0038.scaffold00149 950866 2 GA AC scaffold1721 ScafM SNP 0038.scaffold00149 950907 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 950911 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 950959 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 950966 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 951020 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 951177 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 951183 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 951191 4 AAAT .... scaffold1721 ScafM SNP 0038.scaffold00149 951236 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 951262 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 951266 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 951285 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 951343 1 T G scaffold1721 ScafM INDEL 0038.scaffold00149 951420 2 TT .C scaffold1721 Both SNP 0038.scaffold00149 951510 1 A G scaffold1721 Both SNP 0038.scaffold00149 951584 1 A T scaffold1721 Both SNP 0038.scaffold00149 951596 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 951648 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 951659 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 951663 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 951682 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 951722 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 951732 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 951772 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 951866 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 951899 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 951919 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 951921 2 TG .. scaffold1721 ScafM SNP 0038.scaffold00149 951942 1 A C scaffold1721 ReadM SNP 0038.scaffold00149 952036 1 G A - ScafM SNP 0038.scaffold00149 953058 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953085 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953179 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 953197 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953213 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 953237 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 953242 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 953300 1 G C scaffold1721 Both SNP 0038.scaffold00149 953342 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 953623 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 953657 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 953691 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953738 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953752 2 GC AT scaffold1721 ScafM SNP 0038.scaffold00149 953767 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 953798 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 953806 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 953810 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 953817 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 953821 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 953840 1 G A scaffold1721 ScafM INDEL 0038.scaffold00149 953857 1 . C scaffold1721 ScafM INDEL 0038.scaffold00149 953858 3 ... AGC scaffold1721 ScafM SNP 0038.scaffold00149 953875 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 953891 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 953904 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 953916 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 953949 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 953961 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 953968 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 953971 2 .C TT scaffold1721 ScafM SNP 0038.scaffold00149 954039 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954048 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954064 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 954103 1 G . scaffold1721 ScafM SNP 0038.scaffold00149 954128 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954134 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954136 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 954139 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 954149 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954200 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 954232 1 A G scaffold1721 Both SNP 0038.scaffold00149 954258 1 T G scaffold1721 Both SNP 0038.scaffold00149 954363 1 A G scaffold1721 Both SNP 0038.scaffold00149 954411 1 G T scaffold1721 Both SNP 0038.scaffold00149 954416 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 954427 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 954444 2 TG AA scaffold1721 ScafM SNP 0038.scaffold00149 954447 1 T G scaffold1721 Both SNP 0038.scaffold00149 954463 1 C T scaffold1721 Both SNP 0038.scaffold00149 954563 1 C T scaffold1721 Both SNP 0038.scaffold00149 954573 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 954589 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 954608 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 954629 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 954631 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 954634 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 954651 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 954666 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 954687 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 954690 1 A . scaffold1721 Both SNP 0038.scaffold00149 954725 1 G A scaffold1721 Both SNP 0038.scaffold00149 954752 1 A G scaffold1721 Both SNP 0038.scaffold00149 954768 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 954818 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 954905 1 A G scaffold1721 Both SNP 0038.scaffold00149 954925 1 C G scaffold1721 ScafM INDEL 0038.scaffold00149 954935 1 G . scaffold1721 ScafM SNP 0038.scaffold00149 954938 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 954943 2 AT TC scaffold1721 Both SNP 0038.scaffold00149 954979 1 A G scaffold1721 Both SNP 0038.scaffold00149 954990 1 G A scaffold1721 Both SNP 0038.scaffold00149 955056 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 955079 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 955089 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 955103 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 955109 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 955128 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 955132 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955147 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 955168 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 955173 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 955234 1 . C scaffold1721 ScafM SNP 0038.scaffold00149 955246 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 955268 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955270 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955285 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 955291 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955294 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 955329 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 955346 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955350 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 955358 2 CA TG scaffold1721 ScafM SNP 0038.scaffold00149 955365 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955396 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 955408 1 G . scaffold1721 ScafM SNP 0038.scaffold00149 955410 1 G T scaffold1721 Both SNP 0038.scaffold00149 955500 1 G A scaffold1721 Both SNP 0038.scaffold00149 955518 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 955533 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 955538 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 955547 1 T G scaffold1721 ScafM INDEL 0038.scaffold00149 955555 4 .... TGAA scaffold1721 ScafM SNP 0038.scaffold00149 955564 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 955570 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 955600 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 955628 2 .. GA scaffold1721 ScafM SNP 0038.scaffold00149 955656 1 G T scaffold1721 ScafM INDEL 0038.scaffold00149 955664 1 . T scaffold1721 ScafM SNP 0038.scaffold00149 955680 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 955691 1 T G scaffold1721 ScafM INDEL 0038.scaffold00149 955780 1 . T scaffold1721 ScafM SNP 0038.scaffold00149 955811 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 955842 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 955902 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 955919 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 955922 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 955948 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 955950 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 955973 3 TTA ... scaffold1721 ScafM SNP 0038.scaffold00149 956005 1 G A scaffold1721 Both SNP 0038.scaffold00149 956043 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 956058 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 956102 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 956135 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 956161 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 956183 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 956199 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 956202 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956246 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 956268 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 956273 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 956362 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 956364 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 956377 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956401 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 956419 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 956438 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 956453 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956524 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 956593 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 956598 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 956613 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 956625 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956627 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 956637 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 956641 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956651 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 956664 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 956680 2 AA TG scaffold1721 ScafM SNP 0038.scaffold00149 956716 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 956724 2 AG GC scaffold1721 Both SNP 0038.scaffold00149 956791 1 A G scaffold1721 Both SNP 0038.scaffold00149 956820 1 G A scaffold1721 Both SNP 0038.scaffold00149 956839 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 956939 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 956942 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 956954 1 A G scaffold1721 Both SNP 0038.scaffold00149 956963 1 C A scaffold1721 Both SNP 0038.scaffold00149 957034 1 C G scaffold1721 Both SNP 0038.scaffold00149 957053 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 957075 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 957080 1 G T scaffold1721 Both SNP 0038.scaffold00149 957124 1 T G scaffold1721 Both INDEL 0038.scaffold00149 957214 1 . A scaffold1721 Both SNP 0038.scaffold00149 957222 1 G T scaffold1721 Both SNP 0038.scaffold00149 957237 1 G T scaffold1721 Both SNP 0038.scaffold00149 957265 1 A G scaffold1721 Both SNP 0038.scaffold00149 957273 1 T C scaffold1721 Both SNP 0038.scaffold00149 957340 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 957344 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 957349 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 957384 1 G T scaffold1721 ScafM SNP 0038.scaffold00149 957393 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 957422 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 957424 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 957471 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957509 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957525 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 957530 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 957550 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957580 1 G T scaffold1721 Both SNP 0038.scaffold00149 957611 1 G A scaffold1721 Both SNP 0038.scaffold00149 957620 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 957705 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 957709 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957711 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 957717 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 957724 1 T C scaffold1721 ScafM INDEL 0038.scaffold00149 957726 4 AGAT .... scaffold1721 ScafM SNP 0038.scaffold00149 957767 1 G C scaffold1721 Both SNP 0038.scaffold00149 957783 1 G C scaffold1721 Both SNP 0038.scaffold00149 957822 1 T C scaffold1721 Both SNP 0038.scaffold00149 957845 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 957884 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 957907 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 957928 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957970 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 957982 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 957987 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 958030 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 958043 2 .. AT scaffold1721 ScafM SNP 0038.scaffold00149 958048 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 958089 2 AT TA scaffold1721 ScafM SNP 0038.scaffold00149 958100 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 958187 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 958211 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 958224 1 T G scaffold1721 ScafM SNP 0038.scaffold00149 958255 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 958301 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 958323 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 958390 1 G A scaffold1721 Both SNP 0038.scaffold00149 958446 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 958462 1 T C scaffold1721 ScafM SNP 0038.scaffold00149 958509 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 958522 3 ... GTA scaffold1721 ScafM SNP 0038.scaffold00149 958548 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 958878 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 959003 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 959053 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 959071 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 959086 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 959102 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 959130 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 959161 1 A C scaffold5328 Both SNP 0038.scaffold00149 959225 1 G A scaffold5328 ReadM SNP 0038.scaffold00149 959408 1 T C - Both SNP 0038.scaffold00149 959477 1 C A scaffold5328 Both SNP 0038.scaffold00149 959523 1 A C scaffold5328 Both SNP 0038.scaffold00149 959546 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 959568 1 G A scaffold5328 Both SNP 0038.scaffold00149 959581 1 A G scaffold5328 Both SNP 0038.scaffold00149 959685 1 T C scaffold5328 Both INDEL 0038.scaffold00149 959691 1 . A scaffold5328 Both SNP 0038.scaffold00149 959735 1 C G scaffold5328 Both SNP 0038.scaffold00149 959767 1 A G scaffold5328 Both SNP 0038.scaffold00149 959782 1 A C scaffold5328 Both SNP 0038.scaffold00149 959825 1 G A scaffold5328 Both SNP 0038.scaffold00149 959879 1 A G scaffold5328 Both SNP 0038.scaffold00149 959973 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 960032 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 960035 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 960058 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 960069 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 960093 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 960100 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 960113 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 960127 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 960154 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 960175 2 CC TA scaffold5328 ScafM SNP 0038.scaffold00149 960178 1 G A scaffold5328 Both SNP 0038.scaffold00149 960209 1 C T scaffold5328 Both SNP 0038.scaffold00149 960238 1 T A scaffold5328 Both SNP 0038.scaffold00149 960267 1 G A scaffold5328 ScafM INDEL 0038.scaffold00149 960339 1 C . scaffold5328 ScafM SNP 0038.scaffold00149 960413 2 GT AA scaffold5328 ScafM SNP 0038.scaffold00149 960452 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 960462 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 960503 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 960517 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 960537 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 960543 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 960595 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 960603 2 CA GG scaffold5328 Both SNP 0038.scaffold00149 960653 1 A C scaffold5328 Both SNP 0038.scaffold00149 960662 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960718 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 960724 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 960741 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 960752 2 AG CC scaffold5328 ScafM SNP 0038.scaffold00149 960810 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960838 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 960843 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 960861 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 960875 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 960897 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960942 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960946 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 960959 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960968 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 960986 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 960994 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 960999 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 961023 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961036 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 961058 1 T G scaffold5328 Both SNP 0038.scaffold00149 961080 1 T C scaffold5328 Both INDEL 0038.scaffold00149 961097 1 G . scaffold5328 Both SNP 0038.scaffold00149 961143 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 961190 1 G A scaffold5328 Both SNP 0038.scaffold00149 961210 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961262 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 961264 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961275 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 961279 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961294 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961296 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961305 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961310 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961321 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 961325 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961347 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 961359 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961440 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961453 1 G A scaffold5328 ScafM INDEL 0038.scaffold00149 961463 4 GGGG .... scaffold5328 ScafM SNP 0038.scaffold00149 961469 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 961480 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 961488 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 961528 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 961533 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 961561 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 961577 2 CA AG scaffold5328 ScafM SNP 0038.scaffold00149 961583 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961597 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 961615 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961617 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961621 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 961623 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961634 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 961673 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961676 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961690 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961697 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961751 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961763 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961767 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961790 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961796 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 961798 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 961802 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 961811 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961816 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961835 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 961839 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961844 2 AG TA scaffold5328 ScafM SNP 0038.scaffold00149 961852 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961866 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 961886 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961893 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961903 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 961905 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961910 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961915 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 961925 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 961939 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 961977 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 961979 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 962931 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 962977 2 CG AT scaffold5328 ScafM SNP 0038.scaffold00149 983647 2 CA TG scaffold5328 ScafM SNP 0038.scaffold00149 983654 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 983660 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 983670 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 983681 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 983704 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 983712 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 983757 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 986246 1 G T scaffold5328 ScafM INDEL 0038.scaffold00149 986305 7 GTATAGA ....... scaffold5328 ScafM INDEL 0038.scaffold00149 986315 1 A . scaffold5328 ScafM INDEL 0038.scaffold00149 986317 5 GGGGG ..... scaffold5328 ScafM SNP 0038.scaffold00149 986339 2 AT GC scaffold5328 ReadM SNP 0038.scaffold00149 986766 1 T G - ReadM SNP 0038.scaffold00149 986807 1 C G - ReadM SNP 0038.scaffold00149 986855 1 A G - ReadM SNP 0038.scaffold00149 986946 1 G T - ReadM SNP 0038.scaffold00149 986952 1 C A - ReadM INDEL 0038.scaffold00149 987097 1 . C - ScafM SNP 0038.scaffold00149 990731 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 990922 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 990942 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 991029 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 991055 1 C T scaffold5328 Both SNP 0038.scaffold00149 991075 1 C A scaffold5328 Both SNP 0038.scaffold00149 991104 1 T A scaffold5328 Both SNP 0038.scaffold00149 991131 1 T A scaffold5328 Both SNP 0038.scaffold00149 991173 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 991273 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 991291 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 991293 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 991318 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 991327 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 991343 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 991376 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 991385 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 991436 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 991471 1 T A scaffold5328 Both SNP 0038.scaffold00149 991487 1 T G scaffold5328 Both SNP 0038.scaffold00149 991521 1 A G scaffold5328 ReadM SNP 0038.scaffold00149 991539 1 T G - Both INDEL 0038.scaffold00149 991696 3 GTG ... scaffold5328 Both INDEL 0038.scaffold00149 991843 1 . C scaffold5328 Both SNP 0038.scaffold00149 991940 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 992029 2 GA TT scaffold5328 ScafM SNP 0038.scaffold00149 992033 1 A G scaffold5328 Both SNP 0038.scaffold00149 992076 1 G A scaffold5328 Both SNP 0038.scaffold00149 992080 1 A G scaffold5328 Both SNP 0038.scaffold00149 992138 1 A G scaffold5328 Both SNP 0038.scaffold00149 992190 1 G C scaffold5328 ScafM INDEL 0038.scaffold00149 992211 4 GATA .... scaffold5328 ScafM SNP 0038.scaffold00149 992233 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 992236 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 992247 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 992262 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 992280 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 992292 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 992322 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 992346 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 992353 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 992367 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 992401 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 992409 1 G A scaffold5328 Both SNP 0038.scaffold00149 992422 1 G A scaffold5328 Both INDEL 0038.scaffold00149 992462 1 . A scaffold5328 Both SNP 0038.scaffold00149 992529 1 T C scaffold5328 Both SNP 0038.scaffold00149 992553 1 T G scaffold5328 Both SNP 0038.scaffold00149 992619 1 C T scaffold5328 Both SNP 0038.scaffold00149 992694 1 G A scaffold5328 Both SNP 0038.scaffold00149 992818 1 T G scaffold5328 Both SNP 0038.scaffold00149 992885 1 T G scaffold5328 Both SNP 0038.scaffold00149 992903 1 G A scaffold5328 Both SNP 0038.scaffold00149 992949 1 C T scaffold5328 Both SNP 0038.scaffold00149 993023 1 A C scaffold5328 Both SNP 0038.scaffold00149 993098 1 C T scaffold5328 Both SNP 0038.scaffold00149 993133 1 C T scaffold5328 Both SNP 0038.scaffold00149 993141 1 T C scaffold5328 Both SNP 0038.scaffold00149 993182 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 993212 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 993233 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 993249 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 993267 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 993299 2 TG CA scaffold5328 ScafM SNP 0038.scaffold00149 993312 2 CA AG scaffold5328 ScafM INDEL 0038.scaffold00149 993326 1 C . scaffold5328 ScafM SNP 0038.scaffold00149 993337 2 AA CG scaffold5328 ScafM SNP 0038.scaffold00149 993373 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 993423 1 C T scaffold5328 ScafM INDEL 0038.scaffold00149 993442 6 ...... AATAAC scaffold5328 ScafM SNP 0038.scaffold00149 993479 1 T G scaffold5328 Both SNP 0038.scaffold00149 993508 1 C T scaffold5328 Both SNP 0038.scaffold00149 993589 1 T C scaffold5328 Both SNP 0038.scaffold00149 993626 1 C T scaffold5328 Both SNP 0038.scaffold00149 993641 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 993684 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 993707 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 993731 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 993765 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 993776 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 993784 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 993790 1 C T scaffold5328 Both SNP 0038.scaffold00149 993832 1 A C scaffold5328 Both SNP 0038.scaffold00149 993854 1 C T scaffold5328 Both SNP 0038.scaffold00149 993993 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 994012 1 A G scaffold5328 Both SNP 0038.scaffold00149 994038 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 994068 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 994092 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 994153 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 994162 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 994181 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 994184 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 994191 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 994203 1 C T scaffold5328 Both SNP 0038.scaffold00149 994287 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 994307 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 994349 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 994354 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 994360 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1004384 1 G T scaffold10481 ScafM SNP 0038.scaffold00149 1004409 2 CT TC scaffold10481 ScafM SNP 0038.scaffold00149 1004415 1 G A scaffold10481 ScafM SNP 0038.scaffold00149 1004421 1 G A scaffold10481 ReadM SNP 0038.scaffold00149 1008128 1 G A - ReadM SNP 0038.scaffold00149 1013662 1 T G - ReadM SNP 0038.scaffold00149 1013664 1 C G - ReadM SNP 0038.scaffold00149 1013741 1 C A - ScafM SNP 0038.scaffold00149 1014267 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 1014278 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1014280 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1014297 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1014345 1 T A scaffold5328 ScafM INDEL 0038.scaffold00149 1014373 1 . G scaffold7621 ScafM SNP 0038.scaffold00149 1014376 1 G T scaffold7621 ScafM SNP 0038.scaffold00149 1014384 1 C T scaffold7621 ScafM INDEL 0038.scaffold00149 1014464 1 T . scaffold7621 ReadM SNP 0038.scaffold00149 1014909 1 T G - ScafM SNP 0038.scaffold00149 1015323 1 G A scaffold16686 ScafM SNP 0038.scaffold00149 1015423 1 A T scaffold16686 ReadM SNP 0038.scaffold00149 1015625 1 T A - ReadM SNP 0038.scaffold00149 1015777 1 A T - ReadM SNP 0038.scaffold00149 1016162 1 T C - ReadM SNP 0038.scaffold00149 1016190 1 G A - ReadM SNP 0038.scaffold00149 1016217 1 G C - ReadM SNP 0038.scaffold00149 1016259 1 G A - ReadM SNP 0038.scaffold00149 1016360 1 A T - ReadM SNP 0038.scaffold00149 1016392 1 C T - ReadM SNP 0038.scaffold00149 1016444 1 G T - ScafM SNP 0038.scaffold00149 1019108 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1019165 1 G A scaffold5328 ScafM INDEL 0038.scaffold00149 1019197 1 G . scaffold5328 ScafM SNP 0038.scaffold00149 1019199 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 1019203 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1019241 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1019249 1 C T scaffold5328 ReadM SNP 0038.scaffold00149 1020723 1 A G - ReadM SNP 0038.scaffold00149 1020759 1 T A - ReadM SNP 0038.scaffold00149 1020805 1 T C - ReadM SNP 0038.scaffold00149 1021206 1 C T - ReadM SNP 0038.scaffold00149 1021241 1 T C - ReadM SNP 0038.scaffold00149 1021252 1 T C - ReadM SNP 0038.scaffold00149 1021597 1 T C - ScafM SNP 0038.scaffold00149 1022671 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1022723 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1022750 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 1022773 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 1022821 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 1022831 1 A G scaffold5328 ScafM INDEL 0038.scaffold00149 1022930 1 . T scaffold5328 ScafM SNP 0038.scaffold00149 1022953 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1022959 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 1022979 1 A T scaffold5328 Both SNP 0038.scaffold00149 1023017 1 A G scaffold5328 Both SNP 0038.scaffold00149 1023037 1 G A scaffold5328 Both INDEL 0038.scaffold00149 1023064 1 . A scaffold5328 ReadM INDEL 0038.scaffold00149 1023096 1 . A - ReadM SNP 0038.scaffold00149 1023131 1 G C - ReadM SNP 0038.scaffold00149 1023193 1 T C - Both SNP 0038.scaffold00149 1023250 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1023257 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1023270 1 G T scaffold5328 ScafM INDEL 0038.scaffold00149 1023272 1 T . scaffold5328 ScafM SNP 0038.scaffold00149 1023288 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1023298 1 T C scaffold5328 Both SNP 0038.scaffold00149 1023337 1 A G scaffold5328 ReadM SNP 0038.scaffold00149 1023369 1 C T - ScafM SNP 0038.scaffold00149 1023703 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1023725 2 CA TT scaffold5328 ScafM SNP 0038.scaffold00149 1023753 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 1023795 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1024924 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 1024926 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 1024944 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1024946 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1024968 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1024996 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1025007 1 T C scaffold5328 ScafM INDEL 0038.scaffold00149 1025039 8 ........ TGTCTACC scaffold5328 ScafM SNP 0038.scaffold00149 1025070 2 TC CG scaffold5328 ScafM SNP 0038.scaffold00149 1025075 1 T G scaffold5328 ScafM INDEL 0038.scaffold00149 1025101 2 .. CT scaffold5328 ScafM SNP 0038.scaffold00149 1025126 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 1025131 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1025141 1 A T scaffold5328 ScafM SNP 0038.scaffold00149 1025171 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 1025173 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 1025176 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1025241 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 1025243 1 T A scaffold5328 ScafM INDEL 0038.scaffold00149 1025251 9 ......... ACATTGAGA scaffold5328 ScafM SNP 0038.scaffold00149 1025297 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 1025305 1 T C scaffold5328 ScafM INDEL 0038.scaffold00149 1025311 1 A . scaffold5328 ScafM SNP 0038.scaffold00149 1025332 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 1025380 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 1025389 1 G C scaffold5328 ScafM INDEL 0038.scaffold00149 1025393 1 . A scaffold5328 ScafM SNP 0038.scaffold00149 1025407 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 1025422 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1025431 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1025445 1 A C scaffold5328 ScafM SNP 0038.scaffold00149 1025456 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 1025481 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1026812 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1026835 1 A T scaffold5328 ScafM INDEL 0038.scaffold00149 1026846 1 . C scaffold5328 ScafM SNP 0038.scaffold00149 1026848 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1026855 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 1026862 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 1026891 1 C G scaffold5328 ScafM SNP 0038.scaffold00149 1026896 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1026904 1 C G scaffold5328 ScafM INDEL 0038.scaffold00149 1026919 4 ...A CTGC scaffold5328 ScafM INDEL 0038.scaffold00149 1026952 1 . T scaffold5328 ScafM INDEL 0038.scaffold00149 1026961 1 G . scaffold5328 ScafM INDEL 0038.scaffold00149 1026969 5 ..... AAAGA scaffold5328 ScafM INDEL 0038.scaffold00149 1026972 1 . A scaffold5328 ScafM INDEL 0038.scaffold00149 1027195 1 . A scaffold5328 ScafM INDEL 0038.scaffold00149 1027218 1 . A scaffold5328 ScafM SNP 0038.scaffold00149 1027221 2 CC TA scaffold5328 ScafM SNP 0038.scaffold00149 1027228 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1027235 1 A G scaffold5328 ScafM SNP 0038.scaffold00149 1027259 1 G A scaffold5328 Both SNP 0038.scaffold00149 1027328 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1027381 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 1027383 1 G A scaffold5328 ScafM INDEL 0038.scaffold00149 1027405 3 ... TAG scaffold5328 ScafM INDEL 0038.scaffold00149 1027408 1 . C scaffold5328 ScafM SNP 0038.scaffold00149 1027417 1 G A scaffold5328 ScafM SNP 0038.scaffold00149 1027441 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 1027468 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1027510 1 C T scaffold5328 ScafM INDEL 0038.scaffold00149 1027515 8 ........ GTTGAACT scaffold5328 ScafM INDEL 0038.scaffold00149 1027555 1 . C scaffold5328 ScafM SNP 0038.scaffold00149 1027620 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1027624 1 G C scaffold5328 ScafM SNP 0038.scaffold00149 1027630 1 G A scaffold5328 ScafM INDEL 0038.scaffold00149 1027648 4 TGGC .AAT scaffold5328 ScafM SNP 0038.scaffold00149 1027653 1 G T scaffold5328 ScafM SNP 0038.scaffold00149 1027656 1 C A scaffold5328 ScafM SNP 0038.scaffold00149 1027660 2 AA TT scaffold5328 ScafM SNP 0038.scaffold00149 1027675 1 T A scaffold5328 ScafM SNP 0038.scaffold00149 1027679 1 C A scaffold5328 ScafM INDEL 0038.scaffold00149 1027683 6 CACTAC .....G scaffold5328 ScafM SNP 0038.scaffold00149 1027693 2 TG CT scaffold5328 ScafM SNP 0038.scaffold00149 1027729 1 T C scaffold5328 ScafM SNP 0038.scaffold00149 1027737 1 T C scaffold5328 ScafM INDEL 0038.scaffold00149 1027751 1 A . scaffold5328 ScafM SNP 0038.scaffold00149 1027762 1 C T scaffold5328 ScafM SNP 0038.scaffold00149 1027781 1 T G scaffold5328 ScafM SNP 0038.scaffold00149 1049144 1 C T scaffold3438 ScafM SNP 0038.scaffold00149 1049157 1 T C scaffold3438 ScafM SNP 0038.scaffold00149 1049159 1 C A scaffold3438 ScafM SNP 0038.scaffold00149 1049165 1 C T scaffold3438 ScafM SNP 0038.scaffold00149 1049295 1 C T scaffold3438 ScafM SNP 0038.scaffold00149 1049318 1 A C scaffold3438 ScafM SNP 0038.scaffold00149 1049337 1 C G scaffold3438 ScafM SNP 0038.scaffold00149 1049356 1 T C scaffold3438 ScafM INDEL 0038.scaffold00149 1049404 7 TTTTGAA ....... scaffold3438 ScafM INDEL 0038.scaffold00149 1049413 4 AACC .... scaffold3438 ScafM SNP 0038.scaffold00149 1049465 1 G A scaffold3438 ScafM SNP 0038.scaffold00149 1049468 1 A G scaffold3438 ScafM SNP 0038.scaffold00149 1049501 3 ATT GAA scaffold3438 ScafM SNP 0038.scaffold00149 1049551 1 A T scaffold3438 ScafM SNP 0038.scaffold00149 1049562 1 T A scaffold3438 ScafM SNP 0038.scaffold00149 1049565 1 A C scaffold3438 ScafM INDEL 0038.scaffold00149 1049582 1 T . scaffold3438 ScafM INDEL 0038.scaffold00149 1049638 2 TT .. scaffold3438 ScafM INDEL 0038.scaffold00149 1049645 1 . A scaffold3438 ScafM SNP 0038.scaffold00149 1049673 1 G A scaffold3438 ScafM SNP 0038.scaffold00149 1049697 1 C T scaffold3438 ReadM SNP 0038.scaffold00149 1058833 1 C T - ReadM SNP 0038.scaffold00149 1059125 1 T C - ReadM SNP 0038.scaffold00149 1060049 1 A G - ScafM SNP 0038.scaffold00149 1062074 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 1062111 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 1062148 2 CT .. scaffold1721 ScafM SNP 0038.scaffold00149 1062153 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1062157 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 1062160 3 CAC ... scaffold1721 ScafM INDEL 0038.scaffold00149 1062166 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 1062175 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 1062182 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 1062193 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1062196 1 G A scaffold1721 ScafM SNP 0038.scaffold00149 1062225 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 1062232 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1062242 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1062245 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1062255 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 1062259 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 1062280 1 T A scaffold1721 ScafM INDEL 0038.scaffold00149 1062284 3 CAT ... scaffold1721 ScafM INDEL 0038.scaffold00149 1062294 3 ATC ... scaffold1721 ScafM SNP 0038.scaffold00149 1062304 1 T C scaffold1721 Both SNP 0038.scaffold00149 1062393 1 C T scaffold1721 Both SNP 0038.scaffold00149 1062451 1 A C scaffold1721 Both SNP 0038.scaffold00149 1062526 1 C T scaffold1721 Both SNP 0038.scaffold00149 1062676 1 T C scaffold1721 Both SNP 0038.scaffold00149 1062742 1 G A scaffold1721 Both SNP 0038.scaffold00149 1062790 1 A G scaffold1721 Both SNP 0038.scaffold00149 1062865 1 T C scaffold1721 Both SNP 0038.scaffold00149 1063003 1 C T scaffold1721 Both SNP 0038.scaffold00149 1063060 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 1063084 1 C G scaffold1721 ScafM INDEL 0038.scaffold00149 1063093 4 TCTG .... scaffold1721 ScafM SNP 0038.scaffold00149 1063116 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 1063129 1 G . scaffold1721 ScafM INDEL 0038.scaffold00149 1063132 4 GTAA .... scaffold1721 ScafM INDEL 0038.scaffold00149 1063137 1 C . scaffold1721 ScafM INDEL 0038.scaffold00149 1063139 1 C . scaffold1721 ScafM SNP 0038.scaffold00149 1063172 2 TC AT scaffold1721 Both SNP 0038.scaffold00149 1063384 1 T A scaffold1721 Both SNP 0038.scaffold00149 1063421 1 T C scaffold1721 Both INDEL 0038.scaffold00149 1063424 1 C . scaffold1721 ScafM INDEL 0038.scaffold00149 1063467 8 TCCTATAT ........ scaffold1721 Both SNP 0038.scaffold00149 1063535 1 G T scaffold1721 Both SNP 0038.scaffold00149 1063655 1 C G scaffold1721 ScafM SNP 0038.scaffold00149 1063660 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 1063672 4 .... TCTG scaffold1721 Both INDEL 0038.scaffold00149 1063714 2 GA .. scaffold1721 Both SNP 0038.scaffold00149 1063749 1 A C scaffold1721 ScafM SNP 0038.scaffold00149 1063816 1 C T scaffold1721 Both SNP 0038.scaffold00149 1063865 1 A G scaffold1721 Both SNP 0038.scaffold00149 1064211 1 A C scaffold1721 Both SNP 0038.scaffold00149 1064261 1 G A scaffold1721 Both SNP 0038.scaffold00149 1064314 1 A T scaffold1721 ScafM SNP 0038.scaffold00149 1064348 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 1064356 1 C T scaffold1721 ScafM SNP 0038.scaffold00149 1064365 1 A G scaffold1721 ScafM SNP 0038.scaffold00149 1064386 1 A C scaffold1721 Both SNP 0038.scaffold00149 1064481 1 A C scaffold1721 Both SNP 0038.scaffold00149 1064592 1 C T scaffold1721 Both INDEL 0038.scaffold00149 1064630 2 .. TG scaffold1721 ScafM INDEL 0038.scaffold00149 1064642 7 TATAGTC ....... scaffold1721 Both INDEL 0038.scaffold00149 1064862 1 A . scaffold1721 Both SNP 0038.scaffold00149 1064904 1 T G scaffold1721 Both SNP 0038.scaffold00149 1065019 1 C T scaffold1721 Both SNP 0038.scaffold00149 1065093 1 G A scaffold1721 Both SNP 0038.scaffold00149 1065336 1 A T scaffold1721 Both SNP 0038.scaffold00149 1065369 1 G T scaffold1721 ScafM INDEL 0038.scaffold00149 1065469 13 ............. AGCATTTAGCCGT scaffold1721 ScafM INDEL 0038.scaffold00149 1065471 6 ...... GCATGG scaffold1721 ScafM INDEL 0038.scaffold00149 1065472 1 . T scaffold1721 ScafM SNP 0038.scaffold00149 1065577 1 C T scaffold1721 ScafM INDEL 0038.scaffold00149 1065596 1 T . scaffold1721 ScafM SNP 0038.scaffold00149 1065598 1 T A scaffold1721 ScafM SNP 0038.scaffold00149 1065616 1 A G scaffold1721 ScafM INDEL 0038.scaffold00149 1065697 2 .. TT scaffold1721 ScafM SNP 0038.scaffold00149 1065699 3 CAA TGT scaffold1721 ScafM SNP 0038.scaffold00149 1065718 1 C A scaffold1721 ScafM SNP 0038.scaffold00149 1065741 1 A T scaffold1721 ScafM INDEL 0038.scaffold00149 1065820 7 ....... ACCGCCC scaffold1721 ScafM SNP 0038.scaffold00149 1065833 1 G C scaffold1721 ScafM SNP 0038.scaffold00149 1065872 1 G A scaffold1721 ScafM SNP 0039.scaffold00152 6285 1 G A scaffold3276 Both SNP 0039.scaffold00152 13620 1 A G scaffold3276 ScafM INDEL 0039.scaffold00152 15526 4 .... TTTT scaffold3276 Both SNP 0039.scaffold00152 15557 1 A C scaffold3276 ReadM SNP 0039.scaffold00152 27704 1 C A - ReadM INDEL 0039.scaffold00152 29389 1 A . - ScafM SNP 0039.scaffold00152 37514 1 G A scaffold3276 ScafM INDEL 0039.scaffold00152 45578 1 . T scaffold3276 Both SNP 0039.scaffold00152 58384 1 C T scaffold1930 Both SNP 0039.scaffold00152 61802 1 G A scaffold1930 ScafM SNP 0039.scaffold00152 77349 1 G A scaffold14255 ScafM SNP 0039.scaffold00152 77385 1 G A scaffold14255 ScafM SNP 0039.scaffold00152 77399 1 C G scaffold14255 ScafM INDEL 0039.scaffold00152 77428 3 TTT .GA scaffold14255 ScafM INDEL 0039.scaffold00152 77433 6 AGAGAA ..TTCT scaffold14255 ScafM SNP 0039.scaffold00152 77440 1 G C scaffold14255 ScafM SNP 0039.scaffold00152 77442 1 T G scaffold14255 ScafM INDEL 0039.scaffold00152 77452 4 .... GAGC scaffold14255 ScafM SNP 0039.scaffold00152 77455 1 T G scaffold14255 ScafM INDEL 0039.scaffold00152 77475 8 ........ TGTGTTAA scaffold14255 ScafM SNP 0039.scaffold00152 82356 1 G A scaffold14255 ReadM INDEL 0039.scaffold00152 83607 1 T . - ReadM SNP 0039.scaffold00152 86631 1 T C - ScafM SNP 0039.scaffold00152 89585 1 G A scaffold1726 ScafM SNP 0039.scaffold00152 91208 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 91271 1 A T scaffold1726 ScafM SNP 0039.scaffold00152 91346 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 91424 1 A C scaffold1726 ScafM SNP 0039.scaffold00152 91430 1 C T scaffold1726 ScafM SNP 0039.scaffold00152 91700 1 T G scaffold1726 ScafM SNP 0039.scaffold00152 91883 1 C G scaffold1726 ScafM SNP 0039.scaffold00152 91951 2 CG TC scaffold1726 ScafM SNP 0039.scaffold00152 92480 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 92485 1 T C scaffold1726 ScafM SNP 0039.scaffold00152 92529 1 A T scaffold1726 ScafM SNP 0039.scaffold00152 92545 1 T C scaffold1726 ScafM SNP 0039.scaffold00152 92553 1 G A scaffold1726 ScafM SNP 0039.scaffold00152 92557 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 92602 1 T C scaffold1726 ScafM INDEL 0039.scaffold00152 92605 1 G . scaffold1726 ScafM SNP 0039.scaffold00152 92614 1 G A scaffold1726 ScafM INDEL 0039.scaffold00152 92626 1 G . scaffold1726 ScafM INDEL 0039.scaffold00152 92629 1 . A scaffold1726 ScafM SNP 0039.scaffold00152 92642 1 A T scaffold1726 ScafM SNP 0039.scaffold00152 92730 1 G A scaffold1726 ScafM SNP 0039.scaffold00152 92800 1 C T scaffold1726 ScafM SNP 0039.scaffold00152 92855 2 TG GA scaffold1726 ScafM SNP 0039.scaffold00152 92865 1 G A scaffold1726 ScafM SNP 0039.scaffold00152 92942 1 C T scaffold1726 ScafM SNP 0039.scaffold00152 93005 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 93025 1 T G scaffold1726 ScafM SNP 0039.scaffold00152 93038 1 T C scaffold1726 ScafM SNP 0039.scaffold00152 93080 1 T A scaffold1726 ScafM SNP 0039.scaffold00152 93112 1 A G scaffold1726 ScafM SNP 0039.scaffold00152 93164 1 A T scaffold1726 ScafM SNP 0039.scaffold00152 93251 1 T C scaffold1726 ScafM INDEL 0039.scaffold00152 113284 1 A . scaffold1726 ReadM INDEL 0039.scaffold00152 114730 1 . T - ScafM INDEL 0039.scaffold00152 118943 1 A . scaffold1726 ScafM INDEL 0039.scaffold00152 119708 1 . A scaffold1726 ScafM INDEL 0039.scaffold00152 134108 11 ........... CTCCCCCCCCC scaffold1726 ScafM SNP 0039.scaffold00152 134111 1 T C scaffold1726 ScafM INDEL 0039.scaffold00152 134122 27 ........................... TTTTTTTTTTTTTTTTTTTTTTTTTTT scaffold1726 ScafM SNP 0039.scaffold00152 182634 1 A C scaffold1726 ScafM INDEL 0039.scaffold00152 196085 1 . C scaffold1726 ScafM INDEL 0039.scaffold00152 196090 15 ............... CCCCCCCCCCCCCCC scaffold1726 ScafM SNP 0039.scaffold00152 196114 1 C A scaffold1726 ScafM INDEL 0039.scaffold00152 196116 1 A . scaffold1726 Both INDEL 0039.scaffold00152 196508 1 . G scaffold1726 ScafM INDEL 0039.scaffold00152 216349 1 . A scaffold1726 ReadM SNP 0039.scaffold00152 242488 1 T C - ReadM INDEL 0039.scaffold00152 242814 1 . A - ReadM INDEL 0039.scaffold00152 264444 2 .. CT - ScafM SNP 0039.scaffold00152 273678 1 G C scaffold21374 ScafM INDEL 0039.scaffold00152 275868 43 TTGAGGATTTCGCAACACCTACCTATCCAAAATATATAGATGA ........................................... scaffold21374 ScafM INDEL 0039.scaffold00152 276331 1 . T scaffold21374 ReadM SNP 0039.scaffold00152 281013 1 C T - ScafM SNP 0039.scaffold00152 286717 1 A C scaffold5785 ScafM SNP 0039.scaffold00152 286724 1 A G scaffold5785 ScafM SNP 0039.scaffold00152 286778 1 A G scaffold5785 ScafM SNP 0039.scaffold00152 293958 1 G A scaffold7262 ScafM INDEL 0039.scaffold00152 304741 1 . T scaffold7262 ScafM SNP 0039.scaffold00152 323017 1 G A scaffold13016 ScafM SNP 0039.scaffold00152 323031 1 C T scaffold13016 ScafM SNP 0039.scaffold00152 323066 1 G A scaffold13016 ScafM INDEL 0039.scaffold00152 323106 2 TT .. scaffold13016 ScafM INDEL 0039.scaffold00152 323140 1 T . scaffold13016 ScafM SNP 0039.scaffold00152 323183 1 A C scaffold13016 ScafM SNP 0039.scaffold00152 323197 1 C A scaffold13016 ScafM SNP 0039.scaffold00152 323200 1 G A scaffold13016 ScafM SNP 0039.scaffold00152 323214 1 T C scaffold13016 ScafM SNP 0039.scaffold00152 323220 1 A C scaffold13016 ScafM SNP 0039.scaffold00152 323222 1 G T scaffold13016 ReadM SNP 0039.scaffold00152 326078 1 C T - ReadM SNP 0039.scaffold00152 329799 1 G T - Both SNP 0039.scaffold00152 371327 1 C G scaffold7262 ScafM INDEL 0039.scaffold00152 372765 1 . A scaffold7262 ScafM INDEL 0039.scaffold00152 374619 58 .......................................................... GGCGGATGCGGTGCCACCCACTACCCACCAAAGTCATATCCATACCCGCCCCAACTGG scaffold7262 ScafM INDEL 0039.scaffold00152 379022 21 ..................... TATTTATACTCTATCAGATCC scaffold7262 ScafM INDEL 0039.scaffold00152 383359 1 G . scaffold7262 ScafM INDEL 0039.scaffold00152 383362 14 GAGTTGTGACTTCC .............. scaffold7262 ReadM SNP 0039.scaffold00152 385643 1 G A - ReadM SNP 0039.scaffold00152 397176 1 C A - ScafM SNP 0039.scaffold00152 401943 1 C T scaffold3840 ScafM SNP 0039.scaffold00152 401985 1 A T scaffold3840 ScafM SNP 0039.scaffold00152 401995 1 C T scaffold3840 ScafM INDEL 0039.scaffold00152 401997 1 . A scaffold3840 ScafM SNP 0039.scaffold00152 402025 1 C T scaffold3840 ScafM SNP 0039.scaffold00152 402033 1 T C scaffold3840 ScafM SNP 0039.scaffold00152 402051 1 T C scaffold3840 ScafM INDEL 0039.scaffold00152 407598 1 . T scaffold8186 ReadM SNP 0039.scaffold00152 414156 1 A G - Both SNP 0039.scaffold00152 435684 1 A G scaffold12775 ScafM SNP 0039.scaffold00152 435998 1 G A scaffold12775 ScafM SNP 0039.scaffold00152 436459 1 A G scaffold12775 ScafM INDEL 0039.scaffold00152 440820 1 . A scaffold5709 ScafM INDEL 0039.scaffold00152 452351 1 T . scaffold5709 ReadM SNP 0039.scaffold00152 458729 1 C T - ReadM SNP 0039.scaffold00152 483402 1 C T - ScafM INDEL 0039.scaffold00152 485649 2 .. CA scaffold5709 ScafM SNP 0039.scaffold00152 485651 2 GG AA scaffold5709 ScafM SNP 0039.scaffold00152 485654 2 TT GC scaffold5709 ScafM INDEL 0039.scaffold00152 485659 4 GGTT ..CA scaffold5709 ScafM SNP 0039.scaffold00152 485667 1 G A scaffold5709 ScafM SNP 0039.scaffold00152 485669 2 AC GG scaffold5709 ScafM SNP 0039.scaffold00152 485672 1 G T scaffold5709 ScafM SNP 0039.scaffold00152 485674 1 C T scaffold5709 ScafM SNP 0039.scaffold00152 485676 3 CGG TTT scaffold5709 ScafM SNP 0039.scaffold00152 485680 2 CT AG scaffold5709 ScafM SNP 0039.scaffold00152 485684 1 T G scaffold5709 ScafM INDEL 0039.scaffold00152 485686 2 .. AA scaffold5709 Both SNP 0039.scaffold00152 489167 1 C A scaffold5709 Both SNP 0039.scaffold00152 489318 1 A C scaffold5709 Both SNP 0039.scaffold00152 489573 1 A G scaffold5709 Both SNP 0039.scaffold00152 489677 1 A G scaffold5709 Both SNP 0039.scaffold00152 489781 1 T C scaffold5709 ReadM SNP 0039.scaffold00152 490157 1 T G - ReadM SNP 0039.scaffold00152 490493 1 T A - ReadM SNP 0039.scaffold00152 490500 1 C A - ReadM SNP 0039.scaffold00152 490504 1 G A - ReadM SNP 0039.scaffold00152 490579 1 T G - ReadM SNP 0039.scaffold00152 490628 1 T C - ReadM SNP 0039.scaffold00152 490665 1 G A - ReadM SNP 0039.scaffold00152 490708 1 A G - ReadM SNP 0039.scaffold00152 491445 1 C T - ReadM SNP 0039.scaffold00152 493279 1 A C - ScafM SNP 0039.scaffold00152 496415 1 G T scaffold7644 ScafM SNP 0039.scaffold00152 496426 1 T A scaffold7644 ScafM SNP 0039.scaffold00152 496450 2 TG CA scaffold7644 ScafM SNP 0039.scaffold00152 496480 1 A T scaffold7644 ScafM INDEL 0039.scaffold00152 496532 4 TATA .... scaffold7644 ScafM SNP 0039.scaffold00152 496559 1 A T scaffold7644 ScafM SNP 0039.scaffold00152 496588 1 C T scaffold7644 ScafM SNP 0039.scaffold00152 496606 1 A T scaffold7644 ScafM INDEL 0039.scaffold00152 496629 1 A . scaffold7644 ScafM SNP 0039.scaffold00152 496631 1 A T scaffold7644 ScafM SNP 0039.scaffold00152 496650 1 G A scaffold7644 ScafM SNP 0039.scaffold00152 496652 1 G A scaffold7644 ScafM SNP 0039.scaffold00152 496662 1 C T scaffold7644 ScafM SNP 0039.scaffold00152 496706 1 G A scaffold7644 ScafM SNP 0039.scaffold00152 496723 1 G A scaffold7644 ScafM SNP 0039.scaffold00152 496729 1 G T scaffold7644 ScafM INDEL 0039.scaffold00152 496735 2 CA .G scaffold7644 ScafM SNP 0039.scaffold00152 496763 1 A T scaffold7644 ScafM SNP 0039.scaffold00152 496781 1 T G scaffold7644 ScafM INDEL 0039.scaffold00152 496810 1 . T scaffold7644 ScafM SNP 0039.scaffold00152 496838 1 T C scaffold7644 ScafM SNP 0039.scaffold00152 496840 1 G A scaffold7644 ScafM SNP 0039.scaffold00152 496846 2 TC CT scaffold7644 ScafM SNP 0039.scaffold00152 496881 2 CG TT scaffold7644 ScafM SNP 0039.scaffold00152 496939 1 C A scaffold7644 ScafM SNP 0039.scaffold00152 497881 1 A G scaffold5709 ScafM SNP 0039.scaffold00152 497935 1 T C scaffold5709 ScafM INDEL 0039.scaffold00152 498149 1 . T scaffold5709 ScafM INDEL 0039.scaffold00152 498150 1 . T scaffold5709 ScafM SNP 0039.scaffold00152 498152 1 A G scaffold5709 ScafM SNP 0039.scaffold00152 498234 1 G A scaffold5709 ScafM SNP 0039.scaffold00152 498289 1 C G scaffold5709 ScafM SNP 0039.scaffold00152 498326 2 TC CT scaffold5709 Both SNP 0039.scaffold00152 498347 1 G A scaffold5709 ReadM INDEL 0039.scaffold00152 498477 1 G . - ReadM SNP 0039.scaffold00152 498502 1 G A - ReadM SNP 0039.scaffold00152 498510 1 C A - ReadM SNP 0039.scaffold00152 498542 1 A G - ReadM SNP 0039.scaffold00152 498581 1 G T - ReadM SNP 0039.scaffold00152 498654 1 T G - ReadM SNP 0039.scaffold00152 498673 1 G T - ReadM SNP 0039.scaffold00152 498704 1 T G - ReadM SNP 0039.scaffold00152 498809 1 G A - ReadM SNP 0039.scaffold00152 498891 1 G A - ReadM SNP 0039.scaffold00152 498958 1 G A - ReadM SNP 0039.scaffold00152 499069 1 A C - ReadM SNP 0039.scaffold00152 499130 1 C T - ReadM SNP 0039.scaffold00152 499198 1 G T - ReadM SNP 0039.scaffold00152 499226 1 C T - ReadM SNP 0039.scaffold00152 499451 1 C T - ReadM SNP 0039.scaffold00152 499500 1 G T - ReadM SNP 0039.scaffold00152 499639 1 G A - ReadM SNP 0039.scaffold00152 499688 1 T A - ReadM SNP 0039.scaffold00152 499777 1 G T - ReadM SNP 0039.scaffold00152 499793 1 G A - ReadM SNP 0039.scaffold00152 499853 1 C T - ReadM SNP 0039.scaffold00152 499922 1 A C - ReadM SNP 0039.scaffold00152 500059 1 G A - ReadM SNP 0039.scaffold00152 500073 1 C T - ReadM SNP 0039.scaffold00152 500096 1 T G - ReadM SNP 0039.scaffold00152 500166 1 G A - ReadM SNP 0039.scaffold00152 500179 1 G T - ReadM SNP 0039.scaffold00152 500192 1 G T - ReadM SNP 0039.scaffold00152 500259 1 C T - ReadM INDEL 0039.scaffold00152 500273 1 T . - ReadM SNP 0039.scaffold00152 500280 1 A G - ReadM SNP 0039.scaffold00152 500324 1 A G - ReadM SNP 0039.scaffold00152 500390 1 G A - ReadM SNP 0039.scaffold00152 500464 1 G T - ReadM SNP 0039.scaffold00152 500495 1 C A - ReadM SNP 0039.scaffold00152 500522 1 C T - ReadM SNP 0039.scaffold00152 500635 1 G A - ReadM SNP 0039.scaffold00152 500676 1 G A - ReadM SNP 0039.scaffold00152 500691 1 T C - ReadM SNP 0039.scaffold00152 500765 1 C A - ReadM SNP 0039.scaffold00152 500823 1 T C - ReadM SNP 0039.scaffold00152 500908 1 A T - ReadM SNP 0039.scaffold00152 500923 1 C T - ReadM SNP 0039.scaffold00152 501250 1 C T - ReadM SNP 0039.scaffold00152 501359 1 G T - ReadM SNP 0039.scaffold00152 501392 1 C T - ReadM SNP 0039.scaffold00152 501442 1 C T - ReadM SNP 0039.scaffold00152 501478 1 T C - ReadM SNP 0039.scaffold00152 501525 1 T G - ReadM SNP 0039.scaffold00152 501732 1 T C - ReadM SNP 0039.scaffold00152 501737 1 T C - ReadM INDEL 0039.scaffold00152 501762 1 . T - Both SNP 0039.scaffold00152 501848 1 A G scaffold5709 ScafM SNP 0039.scaffold00152 502204 1 A G scaffold5709 ScafM SNP 0039.scaffold00152 502235 1 A C scaffold5709 ScafM INDEL 0039.scaffold00152 502239 1 G . scaffold5709 ScafM SNP 0039.scaffold00152 502241 1 C T scaffold5709 ScafM SNP 0039.scaffold00152 502452 1 G T scaffold5709 Both SNP 0039.scaffold00152 502498 1 A G scaffold5709 Both SNP 0039.scaffold00152 502585 1 A T scaffold5709 ReadM SNP 0039.scaffold00152 503041 1 C T - ReadM SNP 0039.scaffold00152 503091 1 C T - ScafM INDEL 0039.scaffold00152 503262 1 T . scaffold5709 Both SNP 0039.scaffold00152 503336 1 T C scaffold5709 Both SNP 0039.scaffold00152 503374 1 A G scaffold5709 Both SNP 0039.scaffold00152 503419 1 A C scaffold5709 Both INDEL 0039.scaffold00152 503420 2 .. TT scaffold5709 Both SNP 0039.scaffold00152 503510 1 G T scaffold5709 Both SNP 0039.scaffold00152 503527 1 A C scaffold5709 ReadM INDEL 0039.scaffold00152 503829 2 .. CA - ReadM SNP 0039.scaffold00152 503894 1 G A - ReadM SNP 0039.scaffold00152 503977 1 G A - ReadM SNP 0039.scaffold00152 504093 1 G T - ReadM SNP 0039.scaffold00152 504097 1 G A - ReadM SNP 0039.scaffold00152 504150 1 A T - ReadM SNP 0039.scaffold00152 504337 1 T C - ScafM SNP 0039.scaffold00152 504586 1 T C scaffold5709 ScafM INDEL 0039.scaffold00152 504662 2 .. TT scaffold5709 ScafM SNP 0039.scaffold00152 504718 1 T C scaffold5709 ScafM SNP 0039.scaffold00152 504726 1 C T scaffold5709 ScafM SNP 0039.scaffold00152 505812 1 A C scaffold5709 ScafM INDEL 0039.scaffold00152 505957 1 . A scaffold5709 ReadM SNP 0039.scaffold00152 507477 1 G A - Both INDEL 0039.scaffold00152 507572 1 T . scaffold5709 ScafM SNP 0039.scaffold00152 507588 1 T C scaffold5709 ReadM INDEL 0039.scaffold00152 507916 3 ... TCG - ReadM SNP 0039.scaffold00152 507999 1 A G - ReadM SNP 0039.scaffold00152 508365 1 G A - ReadM SNP 0039.scaffold00152 510469 1 T C - ReadM SNP 0039.scaffold00152 510502 1 T A - ReadM SNP 0039.scaffold00152 510558 1 G C - ReadM INDEL 0039.scaffold00152 510693 1 A . - ReadM SNP 0039.scaffold00152 510706 1 A G - ReadM SNP 0039.scaffold00152 510763 1 C A - Both SNP 0039.scaffold00152 510929 1 C T scaffold5709 Both SNP 0039.scaffold00152 511003 1 C G scaffold5709 Both INDEL 0039.scaffold00152 511023 1 . T scaffold5709 ReadM SNP 0039.scaffold00152 511066 1 G A - ReadM SNP 0039.scaffold00152 511124 1 A G - ReadM SNP 0039.scaffold00152 511145 1 T G - Both SNP 0039.scaffold00152 511254 1 G A scaffold5709 Both SNP 0039.scaffold00152 511314 1 C T scaffold5709 Both SNP 0039.scaffold00152 511425 1 C A scaffold5709 Both SNP 0039.scaffold00152 511546 1 C T scaffold5709 Both SNP 0039.scaffold00152 511620 1 T C scaffold5709 Both SNP 0039.scaffold00152 511659 1 T A scaffold5709 ReadM SNP 0039.scaffold00152 512111 1 A G - ReadM SNP 0039.scaffold00152 512240 1 A G - ReadM SNP 0039.scaffold00152 512285 1 A C - ReadM SNP 0039.scaffold00152 512655 1 C A - ReadM SNP 0039.scaffold00152 512857 1 T G - ReadM SNP 0039.scaffold00152 512950 1 G A - ReadM SNP 0039.scaffold00152 513003 1 G A - ReadM SNP 0039.scaffold00152 513042 1 T A - ReadM SNP 0039.scaffold00152 513077 1 T C - ReadM SNP 0039.scaffold00152 513098 1 C T - ReadM SNP 0039.scaffold00152 513148 1 G A - ReadM INDEL 0039.scaffold00152 513228 2 TT .. - ReadM SNP 0039.scaffold00152 513304 1 A G - ReadM SNP 0039.scaffold00152 515837 1 A T - ReadM SNP 0039.scaffold00152 516017 1 T C - ReadM SNP 0039.scaffold00152 516031 1 A G - ReadM SNP 0039.scaffold00152 516119 1 A G - ReadM SNP 0039.scaffold00152 516217 1 C A - ReadM SNP 0039.scaffold00152 516420 1 T A - ReadM SNP 0039.scaffold00152 516809 1 T C - ReadM SNP 0039.scaffold00152 519207 1 A C - ReadM SNP 0039.scaffold00152 519546 1 C T - Both INDEL 0039.scaffold00152 519884 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 519940 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 520077 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 520094 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 520329 1 G A scaffold1128 Both SNP 0039.scaffold00152 520382 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 520444 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 520460 1 G C scaffold1128 Both SNP 0039.scaffold00152 520608 1 A G scaffold1128 Both SNP 0039.scaffold00152 520755 1 T C scaffold1128 Both SNP 0039.scaffold00152 521115 1 A G scaffold1128 ScafM INDEL 0039.scaffold00152 521251 4 .... TTGC scaffold1128 Both SNP 0039.scaffold00152 521391 1 C T scaffold1128 Both INDEL 0039.scaffold00152 521583 1 . C scaffold1128 ReadM SNP 0039.scaffold00152 521870 1 C T - Both SNP 0039.scaffold00152 522124 1 T A scaffold1128 ScafM INDEL 0039.scaffold00152 522427 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 522558 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 522658 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 522671 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 522716 1 G T scaffold1128 ScafM INDEL 0039.scaffold00152 522735 7 ....... TTAAGAG scaffold1128 ScafM SNP 0039.scaffold00152 522776 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 522800 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 522814 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 522815 1 . A scaffold1128 ScafM SNP 0039.scaffold00152 522901 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 522904 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 522967 1 A T scaffold1128 ScafM INDEL 0039.scaffold00152 522973 1 A . scaffold1128 ScafM SNP 0039.scaffold00152 523004 1 G T scaffold1128 ScafM INDEL 0039.scaffold00152 523081 2 TC .. scaffold1128 ScafM SNP 0039.scaffold00152 523115 1 C A scaffold1128 Both SNP 0039.scaffold00152 523190 1 T C scaffold1128 Both SNP 0039.scaffold00152 523279 1 T A scaffold1128 Both SNP 0039.scaffold00152 523368 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 523416 1 T C scaffold1128 Both SNP 0039.scaffold00152 523603 1 C T scaffold1128 Both SNP 0039.scaffold00152 523943 1 T C scaffold1128 Both SNP 0039.scaffold00152 524560 1 C A scaffold1128 ReadM SNP 0039.scaffold00152 525450 1 T A - ReadM SNP 0039.scaffold00152 525727 1 C T - ScafM SNP 0039.scaffold00152 526022 1 A G scaffold1128 ReadM SNP 0039.scaffold00152 529709 1 T C - ReadM SNP 0039.scaffold00152 530265 1 G A - Both SNP 0039.scaffold00152 530335 1 A T scaffold1128 Both SNP 0039.scaffold00152 530343 1 A C scaffold1128 Both INDEL 0039.scaffold00152 530359 1 . T scaffold1128 Both SNP 0039.scaffold00152 530507 1 C T scaffold1128 Both SNP 0039.scaffold00152 530734 1 T G scaffold1128 ReadM SNP 0039.scaffold00152 530830 1 T A - Both SNP 0039.scaffold00152 530861 1 C T scaffold1128 Both INDEL 0039.scaffold00152 531031 1 . A scaffold1128 ReadM SNP 0039.scaffold00152 531085 1 T C - Both SNP 0039.scaffold00152 531224 1 C T scaffold1128 Both SNP 0039.scaffold00152 531281 1 G C scaffold1128 Both SNP 0039.scaffold00152 531285 1 A T scaffold1128 ReadM SNP 0039.scaffold00152 531568 1 A T - ReadM SNP 0039.scaffold00152 531691 1 G A - ReadM SNP 0039.scaffold00152 531717 1 G A - ReadM SNP 0039.scaffold00152 531732 1 T C - ReadM SNP 0039.scaffold00152 531798 1 A G - ReadM SNP 0039.scaffold00152 531896 1 T A - ReadM SNP 0039.scaffold00152 532271 1 A G - ReadM SNP 0039.scaffold00152 532666 1 C T - ReadM SNP 0039.scaffold00152 532674 1 G T - ReadM SNP 0039.scaffold00152 532695 1 C T - ReadM SNP 0039.scaffold00152 532820 1 T G - ReadM SNP 0039.scaffold00152 533064 1 T C - ReadM INDEL 0039.scaffold00152 533102 1 T . - ReadM SNP 0039.scaffold00152 533295 1 C T - ReadM SNP 0039.scaffold00152 533973 1 T A - ReadM SNP 0039.scaffold00152 534091 2 GG TA - ReadM SNP 0039.scaffold00152 534110 1 A T - ReadM SNP 0039.scaffold00152 534309 1 C T - ReadM SNP 0039.scaffold00152 534478 1 C T - ReadM SNP 0039.scaffold00152 534484 1 T C - ReadM SNP 0039.scaffold00152 534863 1 A T - ReadM SNP 0039.scaffold00152 535228 1 C T - ReadM SNP 0039.scaffold00152 535278 1 T C - ReadM SNP 0039.scaffold00152 535333 1 C T - ReadM SNP 0039.scaffold00152 535647 1 C T - ReadM INDEL 0039.scaffold00152 535706 1 . T - ReadM SNP 0039.scaffold00152 535715 1 G T - ReadM SNP 0039.scaffold00152 535885 1 A T - ReadM SNP 0039.scaffold00152 535970 1 G A - ReadM SNP 0039.scaffold00152 536270 1 T C - ReadM SNP 0039.scaffold00152 536562 1 C T - ReadM SNP 0039.scaffold00152 536727 1 G A - ReadM SNP 0039.scaffold00152 536829 1 T A - ScafM INDEL 0039.scaffold00152 536987 11 ........... GGGGGGGGGGG scaffold1128 Both SNP 0039.scaffold00152 537266 1 G A scaffold1128 Both SNP 0039.scaffold00152 537280 1 G C scaffold1128 Both SNP 0039.scaffold00152 537288 1 G C scaffold1128 Both SNP 0039.scaffold00152 537319 1 A G scaffold1128 Both SNP 0039.scaffold00152 537383 1 T C scaffold1128 Both SNP 0039.scaffold00152 537387 1 T C scaffold1128 Both SNP 0039.scaffold00152 537430 1 T G scaffold1128 Both SNP 0039.scaffold00152 537630 1 A T scaffold1128 Both SNP 0039.scaffold00152 537862 1 T C scaffold1128 Both SNP 0039.scaffold00152 537886 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 537968 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 537991 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 537993 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 537996 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 538021 1 C T scaffold1128 Both SNP 0039.scaffold00152 538044 1 G A scaffold1128 Both INDEL 0039.scaffold00152 538111 2 .. AT scaffold1128 ScafM INDEL 0039.scaffold00152 538147 8 ........ GACCTATT scaffold1128 ScafM SNP 0039.scaffold00152 538154 1 T G scaffold1128 ReadM SNP 0039.scaffold00152 538295 1 C G - ReadM INDEL 0039.scaffold00152 538311 1 . A - ReadM SNP 0039.scaffold00152 538389 1 A C - ReadM SNP 0039.scaffold00152 538561 1 T C - ReadM SNP 0039.scaffold00152 538581 1 A C - ReadM SNP 0039.scaffold00152 538662 1 G A - ReadM SNP 0039.scaffold00152 538671 1 G A - ReadM SNP 0039.scaffold00152 538711 1 C T - ReadM SNP 0039.scaffold00152 539019 1 G A - ReadM SNP 0039.scaffold00152 539046 1 C T - ReadM SNP 0039.scaffold00152 540802 1 C G - ScafM SNP 0039.scaffold00152 540883 1 T C scaffold1128 Both SNP 0039.scaffold00152 540933 1 C T scaffold1128 Both SNP 0039.scaffold00152 540954 1 C T scaffold1128 Both SNP 0039.scaffold00152 541012 1 T G scaffold1128 Both SNP 0039.scaffold00152 541042 1 T A scaffold1128 Both SNP 0039.scaffold00152 541060 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 541079 1 C T scaffold1128 Both SNP 0039.scaffold00152 541162 1 C T scaffold1128 Both SNP 0039.scaffold00152 541179 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 541237 3 TAA ... scaffold1128 ScafM SNP 0039.scaffold00152 541286 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 541299 1 C A scaffold1128 Both SNP 0039.scaffold00152 541323 1 T G scaffold1128 Both SNP 0039.scaffold00152 541336 1 C T scaffold1128 Both SNP 0039.scaffold00152 541400 1 A T scaffold1128 Both SNP 0039.scaffold00152 541428 1 T A scaffold1128 Both SNP 0039.scaffold00152 541459 1 G A scaffold1128 Both SNP 0039.scaffold00152 541526 1 A G scaffold1128 Both SNP 0039.scaffold00152 541558 1 T G scaffold1128 Both SNP 0039.scaffold00152 541565 1 T A scaffold1128 Both INDEL 0039.scaffold00152 541639 1 T . scaffold1128 Both SNP 0039.scaffold00152 541667 1 G A scaffold1128 Both SNP 0039.scaffold00152 541670 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 541695 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 541699 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 541701 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 541710 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 541762 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 541777 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 541787 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 541795 2 .. AT scaffold1128 ScafM SNP 0039.scaffold00152 541813 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 541851 1 T A scaffold1128 ScafM INDEL 0039.scaffold00152 541859 1 G . scaffold1128 ScafM SNP 0039.scaffold00152 541865 1 T G scaffold1128 Both SNP 0039.scaffold00152 541907 1 G A scaffold1128 Both SNP 0039.scaffold00152 541921 1 A T scaffold1128 Both SNP 0039.scaffold00152 541925 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 560123 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 560131 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 560225 1 T A scaffold1128 ScafM INDEL 0039.scaffold00152 560265 1 A . scaffold1128 ScafM SNP 0039.scaffold00152 560268 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 560302 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 560304 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 560345 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 560354 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 560371 5 ..... CAGTC scaffold1128 ScafM INDEL 0039.scaffold00152 560372 2 .. TC scaffold1128 ScafM SNP 0039.scaffold00152 560418 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 560428 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 560431 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 560443 1 C T scaffold1128 ReadM SNP 0039.scaffold00152 563835 1 C T - ReadM SNP 0039.scaffold00152 564260 1 A G - ReadM SNP 0039.scaffold00152 564358 1 A T - ScafM INDEL 0039.scaffold00152 565249 1 G . scaffold1128 ScafM INDEL 0039.scaffold00152 565316 1 . A scaffold1128 ScafM SNP 0039.scaffold00152 565345 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 565396 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 565405 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 565429 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 565432 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 565461 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 565612 2 TG CC scaffold1128 ScafM SNP 0039.scaffold00152 565616 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 565630 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 565659 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 565680 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 565689 1 A . scaffold1128 ScafM INDEL 0039.scaffold00152 565720 3 ... AAG scaffold1128 ScafM SNP 0039.scaffold00152 565727 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 565740 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 565769 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 565794 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 567606 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 567648 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 567653 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 567666 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 567679 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 568005 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 568021 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 568032 1 C G scaffold1128 ScafM INDEL 0039.scaffold00152 568067 2 TT .. scaffold1128 ScafM SNP 0039.scaffold00152 568082 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 568113 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 568119 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 568151 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 568195 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 568224 1 A G scaffold1128 ScafM INDEL 0039.scaffold00152 568251 23 AAAAATAGTAATGCTATCAGTAT ....................... scaffold1128 ScafM SNP 0039.scaffold00152 568300 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 569082 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 569087 1 T A scaffold1128 ScafM INDEL 0039.scaffold00152 569095 2 .. AA scaffold1128 ScafM SNP 0039.scaffold00152 569101 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 569131 1 G C scaffold1128 ScafM INDEL 0039.scaffold00152 569139 1 C . scaffold1128 ScafM INDEL 0039.scaffold00152 569149 6 AAAAAG ...... scaffold1128 ScafM SNP 0039.scaffold00152 569266 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 569302 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 569307 1 T A scaffold1128 ReadM SNP 0039.scaffold00152 569447 1 C A - ReadM SNP 0039.scaffold00152 569524 1 A C - ReadM SNP 0039.scaffold00152 569528 1 T A - ReadM INDEL 0039.scaffold00152 569569 1 C . - ReadM SNP 0039.scaffold00152 569694 1 T A - ScafM SNP 0039.scaffold00152 570348 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 570356 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 570366 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 570373 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 570387 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 570395 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 570433 2 AA GT scaffold1128 ScafM SNP 0039.scaffold00152 570481 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 570513 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 570520 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 570602 1 . A scaffold1128 ScafM SNP 0039.scaffold00152 570621 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 570635 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 570674 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 570683 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 570742 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 570748 1 A G scaffold1128 ReadM SNP 0039.scaffold00152 571219 1 G A - ReadM SNP 0039.scaffold00152 571260 1 C A - ReadM SNP 0039.scaffold00152 571262 1 T A - ReadM SNP 0039.scaffold00152 571304 1 G A - ReadM SNP 0039.scaffold00152 571331 1 G C - ReadM SNP 0039.scaffold00152 571339 1 A G - ReadM SNP 0039.scaffold00152 571406 1 C G - ReadM SNP 0039.scaffold00152 571492 1 A T - ReadM SNP 0039.scaffold00152 571539 1 T C - ReadM SNP 0039.scaffold00152 571543 1 T C - ReadM SNP 0039.scaffold00152 572038 1 A T - ReadM SNP 0039.scaffold00152 572066 1 G A - ReadM SNP 0039.scaffold00152 572607 1 T C - ReadM SNP 0039.scaffold00152 572647 1 A G - ReadM SNP 0039.scaffold00152 573030 1 A T - ReadM SNP 0039.scaffold00152 573158 1 G T - ReadM SNP 0039.scaffold00152 573181 1 A G - ReadM SNP 0039.scaffold00152 573265 1 G A - ReadM SNP 0039.scaffold00152 573386 1 T A - ReadM SNP 0039.scaffold00152 573566 1 G T - ReadM SNP 0039.scaffold00152 573576 1 T C - ReadM SNP 0039.scaffold00152 573748 1 T G - ReadM SNP 0039.scaffold00152 573831 1 C G - ReadM SNP 0039.scaffold00152 573855 1 G A - ReadM SNP 0039.scaffold00152 574114 1 A G - ReadM SNP 0039.scaffold00152 574117 1 T A - ReadM SNP 0039.scaffold00152 574163 1 C T - ReadM SNP 0039.scaffold00152 574239 1 C T - ReadM SNP 0039.scaffold00152 574249 1 T C - ReadM SNP 0039.scaffold00152 576701 1 C T - ReadM SNP 0039.scaffold00152 576708 1 T C - ReadM SNP 0039.scaffold00152 576771 1 A T - ReadM SNP 0039.scaffold00152 576797 1 G C - ReadM SNP 0039.scaffold00152 577140 1 T A - ReadM SNP 0039.scaffold00152 577168 1 T A - ReadM SNP 0039.scaffold00152 577192 1 G C - ReadM SNP 0039.scaffold00152 577258 1 C T - ReadM SNP 0039.scaffold00152 577286 1 A G - ReadM SNP 0039.scaffold00152 577362 1 C G - ReadM SNP 0039.scaffold00152 577441 1 A T - ReadM SNP 0039.scaffold00152 577499 1 G A - ReadM SNP 0039.scaffold00152 577614 1 G C - ReadM SNP 0039.scaffold00152 577651 1 T C - ReadM SNP 0039.scaffold00152 577709 1 G A - ReadM SNP 0039.scaffold00152 577730 1 G A - ReadM SNP 0039.scaffold00152 577768 1 T G - ScafM SNP 0039.scaffold00152 579540 1 A G scaffold1128 ScafM INDEL 0039.scaffold00152 579597 5 ATTCA ..... scaffold1128 ScafM SNP 0039.scaffold00152 579610 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 579622 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 579651 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 579762 5 ..... GGTAC scaffold1128 Both SNP 0039.scaffold00152 579851 1 A G scaffold1128 Both SNP 0039.scaffold00152 579899 1 C G scaffold1128 Both INDEL 0039.scaffold00152 580023 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 580464 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 580487 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 580493 2 AG TA scaffold1128 ScafM SNP 0039.scaffold00152 580522 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 580528 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 580531 1 T . scaffold1128 ScafM INDEL 0039.scaffold00152 580534 2 TC .. scaffold1128 ScafM SNP 0039.scaffold00152 580549 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 580556 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 580590 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 580598 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 580622 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 580663 2 AA GC scaffold1128 ScafM SNP 0039.scaffold00152 580714 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 580717 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 580745 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 580777 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 580787 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 580866 2 CG TA scaffold1128 ScafM SNP 0039.scaffold00152 580887 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 580900 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 580907 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 580913 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 580928 1 C G scaffold1128 ScafM INDEL 0039.scaffold00152 580938 3 ... ATA scaffold1128 ScafM SNP 0039.scaffold00152 580944 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 580973 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 580983 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581004 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581014 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581017 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581020 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 581033 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 581039 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581051 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581054 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 581058 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581064 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 581070 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581078 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581081 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 581084 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581103 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581108 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581113 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581138 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 581149 4 .... GAGC scaffold1128 ScafM SNP 0039.scaffold00152 581175 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 581179 5 ..... ATATC scaffold1128 ScafM SNP 0039.scaffold00152 581186 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581198 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 581224 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 581242 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 581258 2 GG AC scaffold1128 ScafM INDEL 0039.scaffold00152 581266 1 G . scaffold1128 ScafM SNP 0039.scaffold00152 581275 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581279 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581305 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 581309 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581317 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581324 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 581338 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581356 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581741 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581748 1 C G scaffold1128 ScafM INDEL 0039.scaffold00152 581794 3 ... TAT scaffold1128 ScafM SNP 0039.scaffold00152 581804 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 581846 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 581863 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 581869 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 581874 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 581886 7 ....... ATTTTTG scaffold1128 ScafM INDEL 0039.scaffold00152 581891 2 .. TT scaffold1128 ScafM SNP 0039.scaffold00152 581907 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 581910 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 581922 1 A T scaffold1128 ScafM INDEL 0039.scaffold00152 581924 2 CA .. scaffold1128 ReadM SNP 0039.scaffold00152 586609 1 G C - ReadM SNP 0039.scaffold00152 586629 1 C T - ReadM SNP 0039.scaffold00152 587520 1 G A - ScafM SNP 0039.scaffold00152 587667 1 A C scaffold1128 ScafM INDEL 0039.scaffold00152 587762 3 CTA ... scaffold1128 ScafM SNP 0039.scaffold00152 587787 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 587828 1 G . scaffold1128 ScafM INDEL 0039.scaffold00152 587832 3 CAA ... scaffold1128 ScafM SNP 0039.scaffold00152 587861 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 587875 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 587891 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 587925 1 . A scaffold1128 ScafM SNP 0039.scaffold00152 587974 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 587984 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 588012 2 CT TC scaffold1128 ScafM SNP 0039.scaffold00152 588037 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 588046 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 588058 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 588064 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 588069 1 C A scaffold1128 Both SNP 0039.scaffold00152 588119 1 A T scaffold1128 ReadM INDEL 0039.scaffold00152 588216 1 . A - ReadM SNP 0039.scaffold00152 588226 1 G C - ReadM SNP 0039.scaffold00152 588243 1 A G - ReadM SNP 0039.scaffold00152 588308 1 G A - ReadM SNP 0039.scaffold00152 588390 1 C T - ReadM SNP 0039.scaffold00152 588632 1 A G - ReadM SNP 0039.scaffold00152 588690 1 T C - ReadM SNP 0039.scaffold00152 589087 1 A G - ReadM INDEL 0039.scaffold00152 589098 1 C . - ReadM SNP 0039.scaffold00152 589138 1 C T - ReadM SNP 0039.scaffold00152 589305 1 C T - ReadM SNP 0039.scaffold00152 589316 1 A G - ReadM SNP 0039.scaffold00152 589412 1 C A - ReadM SNP 0039.scaffold00152 589424 1 A C - ReadM SNP 0039.scaffold00152 589477 1 A T - ReadM INDEL 0039.scaffold00152 589548 1 T . - ReadM SNP 0039.scaffold00152 589571 1 G A - ReadM SNP 0039.scaffold00152 589594 1 A G - ReadM SNP 0039.scaffold00152 589913 1 A C - ReadM SNP 0039.scaffold00152 589966 1 C T - ScafM INDEL 0039.scaffold00152 592858 2 CA .G scaffold1128 ScafM INDEL 0039.scaffold00152 592889 16 ................ ATATCAACCTCTATAA scaffold1128 ScafM SNP 0039.scaffold00152 592951 1 A G scaffold1128 ScafM INDEL 0039.scaffold00152 592958 1 A . scaffold1128 ScafM SNP 0039.scaffold00152 592962 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 592968 6 AGGGAA ...... scaffold1128 ScafM INDEL 0039.scaffold00152 592975 6 GAATGT ...... scaffold1128 ScafM INDEL 0039.scaffold00152 592983 3 TTC ... scaffold1128 ScafM INDEL 0039.scaffold00152 592988 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 592996 2 TA CG scaffold1128 ScafM SNP 0039.scaffold00152 593049 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 593052 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 593080 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 593115 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 593143 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 593145 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 593176 2 AT CC scaffold1128 ScafM SNP 0039.scaffold00152 593180 2 GA AG scaffold1128 ScafM INDEL 0039.scaffold00152 593209 4 GAGA .... scaffold1128 ScafM SNP 0039.scaffold00152 593229 2 AG CT scaffold1128 ScafM SNP 0039.scaffold00152 593239 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 593243 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 593251 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 593253 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 593269 2 TG CA scaffold1128 ScafM SNP 0039.scaffold00152 593288 3 AAA GCG scaffold1128 ScafM SNP 0039.scaffold00152 593292 1 A G scaffold1128 Both SNP 0039.scaffold00152 593832 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 593873 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 593896 1 T G scaffold1128 ScafM INDEL 0039.scaffold00152 593903 2 .. AC scaffold1128 ScafM SNP 0039.scaffold00152 593904 3 TTT GGA scaffold1128 ScafM INDEL 0039.scaffold00152 593908 1 . G scaffold1128 ScafM INDEL 0039.scaffold00152 593911 11 ........... AAGATGAAATC scaffold1128 ScafM SNP 0039.scaffold00152 593916 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 593926 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 593968 2 GA AG scaffold1128 ScafM SNP 0039.scaffold00152 593994 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 593997 1 G A scaffold1128 ReadM SNP 0039.scaffold00152 594051 1 G T - ReadM SNP 0039.scaffold00152 594135 1 A G - ReadM SNP 0039.scaffold00152 594155 1 A T - ReadM INDEL 0039.scaffold00152 594226 2 .. CA - ReadM SNP 0039.scaffold00152 594729 1 C T - ReadM SNP 0039.scaffold00152 594807 1 T G - ScafM SNP 0039.scaffold00152 595337 1 A G scaffold6383 ReadM SNP 0039.scaffold00152 595608 1 T C - ReadM SNP 0039.scaffold00152 595628 1 A G - Both SNP 0039.scaffold00152 595761 1 T A scaffold6383 ScafM SNP 0039.scaffold00152 595791 1 T A scaffold6383 ScafM SNP 0039.scaffold00152 595835 2 GG TT scaffold6383 ScafM SNP 0039.scaffold00152 595862 1 A G scaffold6383 Both SNP 0039.scaffold00152 596123 1 G T scaffold6383 Both SNP 0039.scaffold00152 596136 1 G T scaffold6383 ScafM SNP 0039.scaffold00152 596193 1 A G scaffold6383 ScafM INDEL 0039.scaffold00152 596233 1 . G scaffold6383 Both SNP 0039.scaffold00152 596345 1 G A scaffold6383 ScafM SNP 0039.scaffold00152 596396 1 T G scaffold6383 ScafM SNP 0039.scaffold00152 596433 1 T G scaffold6383 ScafM INDEL 0039.scaffold00152 596497 1 . C scaffold6383 ReadM SNP 0039.scaffold00152 596611 1 G A - ReadM SNP 0039.scaffold00152 596626 1 C T - ReadM SNP 0039.scaffold00152 596661 1 G A - ScafM INDEL 0039.scaffold00152 596745 1 T . scaffold6383 ScafM INDEL 0039.scaffold00152 596862 2 .. AT scaffold6383 ScafM SNP 0039.scaffold00152 596917 1 T G scaffold6383 Both SNP 0039.scaffold00152 597047 1 T C scaffold6383 ReadM SNP 0039.scaffold00152 597232 1 A C - ReadM SNP 0039.scaffold00152 597503 1 G T - ReadM SNP 0039.scaffold00152 601895 1 G T - ReadM INDEL 0039.scaffold00152 601951 2 .. AC - Both SNP 0039.scaffold00152 602001 1 T C scaffold1128 Both INDEL 0039.scaffold00152 602038 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 602042 1 G C scaffold1128 Both SNP 0039.scaffold00152 602062 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 602129 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 602147 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 602215 1 A C scaffold1128 ScafM INDEL 0039.scaffold00152 602243 2 .. AA scaffold1128 ScafM INDEL 0039.scaffold00152 602245 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 602257 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 602351 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 602388 2 AC .. scaffold1128 ScafM SNP 0039.scaffold00152 603169 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 603181 1 G C scaffold1128 ReadM SNP 0039.scaffold00152 603261 1 G T - ReadM SNP 0039.scaffold00152 603453 1 G T - ReadM INDEL 0039.scaffold00152 603490 1 A . - ReadM SNP 0039.scaffold00152 603504 1 C T - Both INDEL 0039.scaffold00152 603621 3 ... TAA scaffold1128 ScafM SNP 0039.scaffold00152 603669 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 603678 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 603683 1 . G scaffold1128 ScafM INDEL 0039.scaffold00152 603686 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 603693 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 603702 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 603705 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 603711 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 603717 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 603840 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 603851 1 T G scaffold1128 ScafM INDEL 0039.scaffold00152 603862 1 . T scaffold1128 ScafM INDEL 0039.scaffold00152 603874 1 G . scaffold1128 ScafM SNP 0039.scaffold00152 603877 3 TTT AAA scaffold1128 ScafM SNP 0039.scaffold00152 603914 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 603945 2 GA TT scaffold1128 ScafM SNP 0039.scaffold00152 603963 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 603966 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 603990 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 604001 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 604025 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 604065 1 T . scaffold1128 ScafM INDEL 0039.scaffold00152 604071 1 . T scaffold1128 ScafM SNP 0039.scaffold00152 604091 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 604101 3 ... AAT scaffold1128 ScafM SNP 0039.scaffold00152 604113 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 604139 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 604177 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 604186 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 604229 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 604256 2 AT TA scaffold1128 ScafM SNP 0039.scaffold00152 604260 1 G A scaffold1128 ReadM SNP 0039.scaffold00152 604982 1 T C - ScafM SNP 0039.scaffold00152 605271 1 C T scaffold1128 ScafM INDEL 0039.scaffold00152 605287 1 C . scaffold1128 ScafM SNP 0039.scaffold00152 605406 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 605408 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 605440 1 A T scaffold1128 ScafM INDEL 0039.scaffold00152 605444 5 ..... TTGAA scaffold1128 ScafM SNP 0039.scaffold00152 605451 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 605456 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 605549 1 G A scaffold1128 Both SNP 0039.scaffold00152 606019 1 C G scaffold1128 Both INDEL 0039.scaffold00152 606041 1 . A scaffold1128 Both SNP 0039.scaffold00152 606123 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 606194 2 .. TA scaffold1128 ScafM SNP 0039.scaffold00152 606207 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 606213 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 606215 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 606270 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 606279 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 606297 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 606311 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 606319 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 607835 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 607866 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 607888 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 607911 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 607925 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 607949 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 607991 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 608005 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 608024 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 608035 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 608044 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 608053 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 608082 2 GT AC scaffold1128 ScafM SNP 0039.scaffold00152 608089 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 608111 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 608131 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 608155 2 TT CC scaffold1128 ScafM SNP 0039.scaffold00152 608168 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 608175 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 608180 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 608199 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 608205 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 608217 3 CCA TTG scaffold1128 ScafM SNP 0039.scaffold00152 608243 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 608258 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 608263 1 . A scaffold1128 ScafM SNP 0039.scaffold00152 608277 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 608304 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 608332 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 608336 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 608964 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 608969 2 TC CT scaffold1128 ScafM SNP 0039.scaffold00152 608977 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 609010 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 609055 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 609073 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 609075 1 A T scaffold1128 ScafM INDEL 0039.scaffold00152 609098 1 C . scaffold1128 ScafM INDEL 0039.scaffold00152 609134 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 609150 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 609176 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 609192 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 609253 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 609263 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 609292 2 TG CA scaffold1128 ScafM SNP 0039.scaffold00152 609302 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 609315 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 609328 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 609337 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 609394 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 609417 1 G C scaffold1128 ScafM SNP 0039.scaffold00152 609427 1 C T scaffold1128 ReadM SNP 0039.scaffold00152 610135 1 A G - ReadM SNP 0039.scaffold00152 610166 1 G T - ReadM SNP 0039.scaffold00152 610550 1 A T - ReadM SNP 0039.scaffold00152 610563 1 A G - Both SNP 0039.scaffold00152 611732 1 A G scaffold1128 Both SNP 0039.scaffold00152 611765 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 611788 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 611794 1 T G scaffold1128 ScafM INDEL 0039.scaffold00152 611804 2 .A CC scaffold1128 ScafM SNP 0039.scaffold00152 611846 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 611852 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 611869 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 611884 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 611890 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 611904 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 611943 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 611949 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 611956 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 611966 1 A T scaffold1128 ScafM SNP 0039.scaffold00152 611977 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 611981 1 G C scaffold1128 Both SNP 0039.scaffold00152 612013 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 612073 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612077 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 612085 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612101 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 612104 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 612153 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612163 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612165 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612173 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 612232 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 612235 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 612238 2 CC TT scaffold1128 ScafM SNP 0039.scaffold00152 612242 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 612253 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 612255 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612260 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612263 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 612266 1 . G scaffold1128 ScafM SNP 0039.scaffold00152 612282 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612291 1 A C scaffold1128 ScafM INDEL 0039.scaffold00152 612329 3 ... CAT scaffold1128 ScafM SNP 0039.scaffold00152 612337 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 612370 3 ... GGG scaffold1128 ScafM SNP 0039.scaffold00152 612405 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 612414 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612451 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612474 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612486 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 612494 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 612517 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612554 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 612559 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 612563 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 612572 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 612586 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 612599 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612612 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612647 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 612649 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612654 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 612674 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612689 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612694 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 612697 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 612709 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612750 1 C A scaffold1128 ScafM INDEL 0039.scaffold00152 612752 1 G . scaffold1128 ScafM SNP 0039.scaffold00152 612762 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612774 2 TA GT scaffold1128 ScafM SNP 0039.scaffold00152 612786 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 612790 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 612816 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612842 2 AA GG scaffold1128 ScafM SNP 0039.scaffold00152 612861 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612870 2 GC AA scaffold1128 ScafM SNP 0039.scaffold00152 612876 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 612915 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 612930 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 613251 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 613263 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 613269 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613275 2 TG CA scaffold1128 ScafM SNP 0039.scaffold00152 613278 2 CG AA scaffold1128 ScafM SNP 0039.scaffold00152 613300 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613326 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 613512 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613529 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613536 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613596 2 GA AT scaffold1128 ScafM SNP 0039.scaffold00152 613664 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 613675 2 AA CT scaffold1128 ScafM SNP 0039.scaffold00152 613691 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 613695 1 C A scaffold1128 ScafM SNP 0039.scaffold00152 613718 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613730 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613760 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 613779 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613800 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 613818 1 G A scaffold1128 ScafM INDEL 0039.scaffold00152 613824 5 TCTCT ..... scaffold1128 ScafM INDEL 0039.scaffold00152 613833 15 TCTTCGTTGTGCTGT ............... scaffold1128 ScafM SNP 0039.scaffold00152 613853 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613894 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 613897 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 613900 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613910 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 613917 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613936 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 613951 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 613974 2 AT CG scaffold1128 ScafM SNP 0039.scaffold00152 613977 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 613997 1 A C scaffold1128 ScafM SNP 0039.scaffold00152 614003 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 614006 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 614063 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 614070 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 614101 1 T A scaffold1128 ScafM SNP 0039.scaffold00152 614117 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 614120 1 C G scaffold1128 ScafM SNP 0039.scaffold00152 614156 1 C T scaffold1128 Both SNP 0039.scaffold00152 614279 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 614296 1 G T scaffold1128 ScafM SNP 0039.scaffold00152 614354 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 614411 1 A G scaffold1128 ScafM INDEL 0039.scaffold00152 614413 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 614599 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 614622 1 C T scaffold1128 ScafM SNP 0039.scaffold00152 614635 2 CT TC scaffold1128 ScafM SNP 0039.scaffold00152 614676 1 G A scaffold1128 Both SNP 0039.scaffold00152 614770 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 614800 1 T . scaffold1128 ScafM SNP 0039.scaffold00152 614821 1 C G scaffold1128 ReadM SNP 0039.scaffold00152 614898 1 C T - ReadM SNP 0039.scaffold00152 614928 1 A G - ReadM SNP 0039.scaffold00152 615563 1 T C - ReadM SNP 0039.scaffold00152 615577 1 A G - ReadM SNP 0039.scaffold00152 615981 1 G A - ReadM SNP 0039.scaffold00152 616030 1 C T - ReadM INDEL 0039.scaffold00152 616073 1 C . - ReadM SNP 0039.scaffold00152 616101 1 A C - ScafM SNP 0039.scaffold00152 620000 1 G A scaffold13682 ScafM INDEL 0039.scaffold00152 620005 3 CAA ... scaffold13682 ScafM INDEL 0039.scaffold00152 620010 3 TTA ... scaffold13682 ScafM SNP 0039.scaffold00152 620024 1 G A scaffold13682 ScafM INDEL 0039.scaffold00152 620035 4 .... TGCA scaffold13682 ScafM SNP 0039.scaffold00152 620046 1 A G scaffold13682 ScafM SNP 0039.scaffold00152 620055 1 G C scaffold13682 ScafM SNP 0039.scaffold00152 620094 1 C A scaffold13682 ScafM SNP 0039.scaffold00152 620100 1 T C scaffold13682 ScafM SNP 0039.scaffold00152 620125 1 G C scaffold13682 ScafM SNP 0039.scaffold00152 620154 1 C T scaffold13682 ScafM SNP 0039.scaffold00152 620200 1 A G scaffold13682 ScafM INDEL 0039.scaffold00152 620217 1 . G scaffold13682 ScafM SNP 0039.scaffold00152 620248 1 G A scaffold13682 ScafM SNP 0039.scaffold00152 620266 1 T C scaffold13682 ScafM SNP 0039.scaffold00152 620268 1 A G scaffold13682 ScafM SNP 0039.scaffold00152 620272 1 A T scaffold13682 ScafM INDEL 0039.scaffold00152 620283 1 . A scaffold13682 ScafM SNP 0039.scaffold00152 620307 2 GT TC scaffold13682 ScafM SNP 0039.scaffold00152 620318 1 G T scaffold13682 ScafM SNP 0039.scaffold00152 620339 1 A T scaffold13682 ScafM INDEL 0039.scaffold00152 620405 1 . T scaffold13682 ScafM SNP 0039.scaffold00152 620420 1 G T scaffold13682 ScafM INDEL 0039.scaffold00152 620456 2 TA .. scaffold13682 ScafM SNP 0039.scaffold00152 620525 1 G T scaffold13682 ScafM SNP 0039.scaffold00152 621285 1 T C scaffold1128 ScafM INDEL 0039.scaffold00152 621291 2 .. TA scaffold1128 ScafM INDEL 0039.scaffold00152 621319 29 GTTATGTAATGGAATGAATCAAGGAATTA ............................. scaffold1128 ScafM INDEL 0039.scaffold00152 621349 2 AT .. scaffold1128 ScafM INDEL 0039.scaffold00152 621352 1 A . scaffold1128 ScafM INDEL 0039.scaffold00152 621355 7 TTCAGGG ....... scaffold1128 ScafM SNP 0039.scaffold00152 621404 1 A G scaffold1128 ScafM SNP 0039.scaffold00152 621412 1 T C scaffold1128 ScafM SNP 0039.scaffold00152 621420 1 T G scaffold1128 ScafM SNP 0039.scaffold00152 621472 1 G A scaffold1128 ScafM SNP 0039.scaffold00152 621495 1 C A scaffold1128 ReadM SNP 0039.scaffold00152 623731 1 G A - ScafM INDEL 0039.scaffold00152 624529 7 ....... TATGACA scaffold2843 ScafM SNP 0039.scaffold00152 624568 1 C T scaffold2843 ScafM SNP 0039.scaffold00152 625654 1 C A scaffold4624 ScafM SNP 0039.scaffold00152 625659 1 A G scaffold4624 ScafM SNP 0039.scaffold00152 625677 1 T A scaffold4624 ScafM SNP 0039.scaffold00152 625699 1 T C scaffold4624 ScafM SNP 0039.scaffold00152 625705 1 A G scaffold4624 ScafM SNP 0039.scaffold00152 631697 1 A G scaffold8565 ScafM SNP 0039.scaffold00152 631700 1 T G scaffold8565 ScafM SNP 0039.scaffold00152 631711 1 T G scaffold8565 ScafM SNP 0039.scaffold00152 631729 1 A G scaffold8565 ReadM SNP 0039.scaffold00152 635738 1 A G - ReadM SNP 0039.scaffold00152 635836 1 T C - ReadM SNP 0039.scaffold00152 635858 1 A G - ReadM INDEL 0039.scaffold00152 635922 1 C . - ReadM SNP 0039.scaffold00152 635935 1 T C - ReadM SNP 0039.scaffold00152 635940 1 C G - ReadM SNP 0039.scaffold00152 636268 1 C T - ReadM SNP 0039.scaffold00152 636290 1 G T - ReadM SNP 0039.scaffold00152 636315 1 A G - ScafM SNP 0039.scaffold00152 636480 1 T C scaffold234 ScafM SNP 0039.scaffold00152 636492 1 T A scaffold234 ScafM SNP 0039.scaffold00152 636524 1 A G scaffold234 ScafM SNP 0039.scaffold00152 636553 1 C T scaffold234 ScafM SNP 0039.scaffold00152 636556 1 C A scaffold234 ScafM SNP 0039.scaffold00152 636560 1 T C scaffold234 ScafM SNP 0039.scaffold00152 636565 1 T C scaffold234 ScafM SNP 0039.scaffold00152 636591 1 C T scaffold234 ScafM SNP 0039.scaffold00152 636608 1 C T scaffold234 ReadM SNP 0039.scaffold00152 636624 1 G A - ReadM SNP 0039.scaffold00152 636629 1 T C - ReadM SNP 0039.scaffold00152 636765 1 A G - ReadM SNP 0039.scaffold00152 636780 1 T C - ReadM SNP 0039.scaffold00152 636820 1 T C - ScafM SNP 0039.scaffold00152 637075 1 C T scaffold234 Both SNP 0039.scaffold00152 637106 1 T C scaffold234 Both SNP 0039.scaffold00152 637143 1 T C scaffold234 Both SNP 0039.scaffold00152 637219 1 C T scaffold234 ScafM SNP 0039.scaffold00152 637234 1 G A scaffold234 ScafM SNP 0039.scaffold00152 637237 1 A G scaffold234 ScafM SNP 0039.scaffold00152 637255 1 C A scaffold234 ScafM SNP 0039.scaffold00152 637257 1 C A scaffold234 ScafM SNP 0039.scaffold00152 637288 1 C T scaffold234 ScafM SNP 0039.scaffold00152 637335 1 C T scaffold234 ScafM SNP 0039.scaffold00152 637337 1 C T scaffold234 Both SNP 0039.scaffold00152 637392 1 C T scaffold234 Both SNP 0039.scaffold00152 637398 1 C T scaffold234 ScafM INDEL 0039.scaffold00152 637445 21 ACTACTTTTTGTATTTTTTGC ..................... scaffold234 Both SNP 0039.scaffold00152 637538 1 G A scaffold234 ScafM SNP 0039.scaffold00152 637593 2 TT CC scaffold234 ScafM SNP 0039.scaffold00152 637628 1 A C scaffold234 ScafM SNP 0039.scaffold00152 637633 1 C A scaffold234 Both SNP 0039.scaffold00152 637690 1 A T scaffold234 Both SNP 0039.scaffold00152 637699 1 A G scaffold234 Both SNP 0039.scaffold00152 637713 1 C T scaffold234 ScafM SNP 0039.scaffold00152 637778 1 A G scaffold234 ScafM SNP 0039.scaffold00152 637803 1 C T scaffold234 ScafM SNP 0039.scaffold00152 637809 1 G A scaffold234 ScafM SNP 0039.scaffold00152 637816 1 G T scaffold234 ScafM SNP 0039.scaffold00152 637834 1 A G scaffold234 ScafM SNP 0039.scaffold00152 637841 1 A G scaffold234 ScafM SNP 0039.scaffold00152 637874 1 T C scaffold234 ScafM SNP 0039.scaffold00152 637877 1 A C scaffold234 ScafM SNP 0039.scaffold00152 637928 1 T C scaffold234 ScafM SNP 0039.scaffold00152 637935 2 CC TT scaffold234 ScafM SNP 0039.scaffold00152 637964 1 G A scaffold234 ScafM SNP 0039.scaffold00152 637974 1 G A scaffold234 ScafM SNP 0039.scaffold00152 637983 1 A T scaffold234 ScafM SNP 0039.scaffold00152 637991 1 C T scaffold234 ScafM SNP 0039.scaffold00152 638011 1 G A scaffold234 ScafM SNP 0039.scaffold00152 638024 1 T C scaffold234 ScafM SNP 0039.scaffold00152 638112 1 A T scaffold234 ScafM INDEL 0039.scaffold00152 638127 5 ..... CTTAG scaffold234 ScafM SNP 0039.scaffold00152 638162 1 A G scaffold234 ScafM SNP 0039.scaffold00152 638168 1 T C scaffold234 ScafM SNP 0039.scaffold00152 638196 1 C A scaffold234 ScafM SNP 0039.scaffold00152 638248 1 T A scaffold234 ScafM SNP 0039.scaffold00152 638267 1 C A scaffold234 ScafM SNP 0039.scaffold00152 638312 1 C T scaffold234 ScafM SNP 0039.scaffold00152 638316 1 T A scaffold234 ReadM SNP 0039.scaffold00152 638338 1 G T - ReadM SNP 0039.scaffold00152 638462 1 C A - ReadM SNP 0039.scaffold00152 638466 1 G A - Both SNP 0039.scaffold00152 638666 1 G C scaffold234 Both SNP 0039.scaffold00152 638678 1 T C scaffold234 ScafM SNP 0039.scaffold00152 638702 1 G C scaffold234 ScafM SNP 0039.scaffold00152 638704 1 A C scaffold234 ScafM SNP 0039.scaffold00152 638722 1 C A scaffold234 ScafM SNP 0039.scaffold00152 638730 1 A G scaffold234 ScafM INDEL 0039.scaffold00152 638776 4 .... CACC scaffold234 ScafM SNP 0039.scaffold00152 638786 1 T G scaffold234 ScafM SNP 0039.scaffold00152 638801 1 T C scaffold234 ScafM SNP 0039.scaffold00152 638809 1 C T scaffold234 ScafM SNP 0039.scaffold00152 638811 2 AT GC scaffold234 ScafM SNP 0039.scaffold00152 638851 1 C T scaffold234 ScafM SNP 0039.scaffold00152 638874 1 G A scaffold234 ScafM SNP 0039.scaffold00152 638877 1 G A scaffold234 ScafM SNP 0039.scaffold00152 638890 1 T C scaffold234 Both SNP 0039.scaffold00152 638946 1 G A scaffold234 Both SNP 0039.scaffold00152 638951 1 G A scaffold234 Both SNP 0039.scaffold00152 639005 1 C A scaffold234 ScafM SNP 0039.scaffold00152 639099 2 GA AG scaffold234 ScafM INDEL 0039.scaffold00152 639147 1 T . scaffold234 Both SNP 0039.scaffold00152 639188 1 A G scaffold234 Both INDEL 0039.scaffold00152 639197 1 . A scaffold234 ScafM SNP 0039.scaffold00152 639276 1 T C scaffold234 Both INDEL 0039.scaffold00152 639278 1 G . scaffold234 ScafM SNP 0039.scaffold00152 639303 1 C T scaffold234 ScafM SNP 0039.scaffold00152 639311 1 G T scaffold234 ScafM INDEL 0039.scaffold00152 639327 1 . T scaffold234 Both SNP 0039.scaffold00152 639355 1 G A scaffold234 Both SNP 0039.scaffold00152 639417 1 G A scaffold234 Both SNP 0039.scaffold00152 639423 1 G C scaffold234 Both SNP 0039.scaffold00152 639466 1 A G scaffold234 ScafM SNP 0039.scaffold00152 639487 1 T C scaffold234 ScafM SNP 0039.scaffold00152 639490 1 A C scaffold234 Both SNP 0039.scaffold00152 639541 1 T C scaffold234 Both SNP 0039.scaffold00152 639595 1 A G scaffold234 Both SNP 0039.scaffold00152 639597 1 A G scaffold234 ScafM SNP 0039.scaffold00152 639671 1 G A scaffold234 ScafM SNP 0039.scaffold00152 639676 1 T C scaffold234 ScafM SNP 0039.scaffold00152 639693 1 C T scaffold234 ScafM INDEL 0039.scaffold00152 639797 6 ...... CAAACC scaffold234 ScafM INDEL 0039.scaffold00152 639847 31 ............................... ACATCGAAATTACCTAAAATTTGAGAAAGAT scaffold234 ReadM SNP 0039.scaffold00152 639848 1 G A - ScafM INDEL 0039.scaffold00152 639848 11 ........... AAATTTTTAAA scaffold234 Both SNP 0039.scaffold00152 639885 1 A G scaffold234 Both SNP 0039.scaffold00152 639909 1 T A scaffold234 ScafM SNP 0039.scaffold00152 639963 1 G A scaffold234 ScafM INDEL 0039.scaffold00152 639970 37 AAATCTTTAATTTCCTTGCTTCATCCAAGTCTGAGAA ..................................... scaffold234 Both SNP 0039.scaffold00152 640103 1 T G scaffold234 Both SNP 0039.scaffold00152 640171 1 C T scaffold234 Both SNP 0039.scaffold00152 640179 1 T C scaffold234 ReadM SNP 0039.scaffold00152 640229 1 A C - ScafM SNP 0039.scaffold00152 640407 1 C A scaffold234 ScafM SNP 0039.scaffold00152 640555 1 A G scaffold234 ScafM SNP 0039.scaffold00152 640588 1 A C scaffold234 ScafM SNP 0039.scaffold00152 640602 1 G A scaffold234 ScafM SNP 0039.scaffold00152 640694 1 T A scaffold234 ReadM SNP 0039.scaffold00152 641585 1 G A - ReadM SNP 0039.scaffold00152 641590 1 T G - ReadM SNP 0039.scaffold00152 641758 1 T A - ReadM SNP 0039.scaffold00152 641773 1 A G - ReadM SNP 0039.scaffold00152 641811 1 T C - ReadM SNP 0039.scaffold00152 641894 1 C T - ReadM SNP 0039.scaffold00152 641928 1 C G - ScafM SNP 0039.scaffold00152 642377 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642429 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642432 1 G A scaffold2843 ScafM INDEL 0039.scaffold00152 642457 4 GCTT .... scaffold2843 ScafM SNP 0039.scaffold00152 642477 1 T G scaffold2843 ScafM SNP 0039.scaffold00152 642481 1 C A scaffold2843 ScafM SNP 0039.scaffold00152 642491 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642497 1 G T scaffold2843 ScafM SNP 0039.scaffold00152 642504 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642530 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642532 2 TA AC scaffold2843 ScafM SNP 0039.scaffold00152 642535 3 AAA TTT scaffold2843 ScafM INDEL 0039.scaffold00152 642546 6 ...... TTGTAA scaffold2843 ScafM SNP 0039.scaffold00152 642559 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642568 1 C T scaffold2843 ScafM SNP 0039.scaffold00152 642588 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642612 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642636 1 C T scaffold2843 ScafM SNP 0039.scaffold00152 642647 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642664 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642687 1 T C scaffold2843 ScafM INDEL 0039.scaffold00152 642715 2 .. GA scaffold2843 ScafM INDEL 0039.scaffold00152 642718 3 ... TAA scaffold2843 ScafM SNP 0039.scaffold00152 642732 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642742 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642762 2 AT TC scaffold2843 ScafM SNP 0039.scaffold00152 642798 1 G C scaffold2843 ScafM SNP 0039.scaffold00152 642816 1 G T scaffold2843 ScafM SNP 0039.scaffold00152 642834 1 C T scaffold2843 ScafM SNP 0039.scaffold00152 642838 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642843 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642854 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642864 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642875 1 T G scaffold2843 ScafM SNP 0039.scaffold00152 642885 1 A T scaffold2843 ScafM SNP 0039.scaffold00152 642889 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642892 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 642902 1 T A scaffold2843 ScafM SNP 0039.scaffold00152 642904 1 T A scaffold2843 ScafM SNP 0039.scaffold00152 642917 1 T G scaffold2843 ScafM SNP 0039.scaffold00152 642946 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642953 1 T A scaffold2843 ScafM SNP 0039.scaffold00152 642962 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642968 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 642971 1 A G scaffold2843 ScafM SNP 0039.scaffold00152 642979 1 T G scaffold2843 ScafM SNP 0039.scaffold00152 643001 1 A T scaffold2843 ScafM SNP 0039.scaffold00152 643008 1 G A scaffold2843 ScafM SNP 0039.scaffold00152 643016 1 T C scaffold2843 ScafM SNP 0039.scaffold00152 644947 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 644952 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 644959 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 644972 2 TA .. scaffold2580 ScafM INDEL 0039.scaffold00152 644980 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 644991 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 644996 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 645011 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 645017 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 645019 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 645021 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 645040 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 645070 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 645150 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 645171 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 645173 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 645194 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 645199 3 AAA .GG scaffold2580 ScafM INDEL 0039.scaffold00152 645207 4 CTAC .... scaffold2580 ScafM INDEL 0039.scaffold00152 645219 12 GAAAAATAAATC ............ scaffold2580 ScafM INDEL 0039.scaffold00152 645238 1 G . scaffold2580 ScafM INDEL 0039.scaffold00152 645243 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 645249 2 TA CC scaffold2580 ScafM SNP 0039.scaffold00152 645260 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 645261 1 . T scaffold2580 ScafM INDEL 0039.scaffold00152 645263 1 . G scaffold2580 ScafM INDEL 0039.scaffold00152 645267 1 C . scaffold2580 ScafM INDEL 0039.scaffold00152 645315 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 645325 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 645329 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 645331 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 645343 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 645350 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 645363 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 645396 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 645408 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 645413 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 645426 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 645434 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 648677 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648686 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648692 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648708 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648710 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648736 1 T . scaffold4391 ScafM INDEL 0039.scaffold00152 648854 1 . T scaffold4391 ReadM SNP 0039.scaffold00152 649017 1 G C - ScafM SNP 0039.scaffold00152 651728 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 651862 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 652910 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 652912 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 652923 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 652934 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 652945 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 652958 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 652991 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 653015 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 653021 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 653022 2 .. TG scaffold2580 ScafM INDEL 0039.scaffold00152 653025 5 ..... GCCTA scaffold2580 ScafM SNP 0039.scaffold00152 653077 2 GT AG scaffold2580 ScafM SNP 0039.scaffold00152 653083 2 AG CA scaffold2580 ScafM INDEL 0039.scaffold00152 653097 2 AG .. scaffold2580 ScafM SNP 0039.scaffold00152 653102 2 TA CC scaffold2580 ScafM INDEL 0039.scaffold00152 653106 2 GT .. scaffold2580 ScafM INDEL 0039.scaffold00152 653112 2 CC .. scaffold2580 ScafM INDEL 0039.scaffold00152 653115 2 CC .. scaffold2580 ScafM SNP 0039.scaffold00152 653163 1 C A scaffold2580 Both SNP 0039.scaffold00152 653191 1 A G scaffold2580 Both SNP 0039.scaffold00152 653228 1 T C scaffold2580 Both SNP 0039.scaffold00152 653233 1 C T scaffold2580 Both SNP 0039.scaffold00152 653324 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 653372 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 653381 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 653391 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 653442 1 C A scaffold2580 ReadM SNP 0039.scaffold00152 653780 1 T A - Both INDEL 0039.scaffold00152 653815 2 AA .. scaffold2580 ScafM SNP 0039.scaffold00152 653881 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 653904 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 653961 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 653965 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 654015 1 C G scaffold2580 Both SNP 0039.scaffold00152 654203 1 A G scaffold2580 Both SNP 0039.scaffold00152 654214 1 C T scaffold2580 Both SNP 0039.scaffold00152 654290 1 C T scaffold2580 Both SNP 0039.scaffold00152 654311 1 T C scaffold2580 Both SNP 0039.scaffold00152 654685 1 T A scaffold2580 Both SNP 0039.scaffold00152 654835 1 C T scaffold2580 Both SNP 0039.scaffold00152 654904 1 C T scaffold2580 Both SNP 0039.scaffold00152 655141 1 T C scaffold2580 Both SNP 0039.scaffold00152 655420 1 C A scaffold2580 ScafM INDEL 0039.scaffold00152 655497 7 ....... TACATTT scaffold2580 Both INDEL 0039.scaffold00152 655526 1 . T scaffold2580 ScafM INDEL 0039.scaffold00152 655668 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 656035 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 656042 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 656104 1 G T scaffold2580 Both SNP 0039.scaffold00152 656422 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 656495 8 ........ ACTTTTTC scaffold2580 ScafM SNP 0039.scaffold00152 656505 1 A G scaffold2580 Both SNP 0039.scaffold00152 656541 1 G C scaffold2580 Both SNP 0039.scaffold00152 656638 1 T G scaffold2580 Both SNP 0039.scaffold00152 656761 1 C G scaffold2580 Both SNP 0039.scaffold00152 656858 1 C T scaffold2580 Both SNP 0039.scaffold00152 656880 1 G A scaffold2580 Both SNP 0039.scaffold00152 656935 1 G A scaffold2580 Both SNP 0039.scaffold00152 656950 1 G A scaffold2580 Both SNP 0039.scaffold00152 656952 1 G C scaffold2580 Both SNP 0039.scaffold00152 657013 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 657090 3 ... AAG scaffold2580 Both SNP 0039.scaffold00152 657116 1 T C scaffold2580 Both SNP 0039.scaffold00152 657156 1 C A scaffold2580 Both SNP 0039.scaffold00152 657159 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 657214 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 657228 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 657230 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 657262 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 657270 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 657293 2 AT GC scaffold2580 Both SNP 0039.scaffold00152 657320 1 C T scaffold2580 Both SNP 0039.scaffold00152 657331 1 T C scaffold2580 Both SNP 0039.scaffold00152 657486 1 A T scaffold2580 Both SNP 0039.scaffold00152 657515 1 T C scaffold2580 Both SNP 0039.scaffold00152 657535 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 657553 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 657565 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 657567 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 657586 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 657604 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 657611 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 657619 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 657646 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 657684 4 ATAC .... scaffold2580 ScafM INDEL 0039.scaffold00152 657689 2 AA .. scaffold2580 ScafM SNP 0039.scaffold00152 657702 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 657720 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 657753 1 T . scaffold2580 Both SNP 0039.scaffold00152 657763 1 G A scaffold2580 Both SNP 0039.scaffold00152 657794 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 657871 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 657900 2 AC GT scaffold2580 ScafM SNP 0039.scaffold00152 657921 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 657928 2 TT .. scaffold2580 ScafM SNP 0039.scaffold00152 657948 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 657966 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 658030 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 658041 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 658060 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 658104 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 658549 1 A G - ReadM SNP 0039.scaffold00152 658665 1 A C - ReadM SNP 0039.scaffold00152 658892 1 C T - ReadM SNP 0039.scaffold00152 658968 1 T C - ReadM SNP 0039.scaffold00152 659003 1 T G - ReadM SNP 0039.scaffold00152 659055 1 C T - ReadM SNP 0039.scaffold00152 659100 1 C T - ReadM SNP 0039.scaffold00152 659149 1 C G - ReadM SNP 0039.scaffold00152 659161 1 C T - ReadM SNP 0039.scaffold00152 659287 1 C A - ReadM SNP 0039.scaffold00152 659290 1 T G - ReadM SNP 0039.scaffold00152 659324 1 C G - ReadM SNP 0039.scaffold00152 659377 1 A C - ReadM SNP 0039.scaffold00152 659530 1 C A - ReadM INDEL 0039.scaffold00152 659586 1 T . - ReadM SNP 0039.scaffold00152 659695 1 A G - ReadM SNP 0039.scaffold00152 659792 1 A G - ReadM SNP 0039.scaffold00152 659918 1 T C - ReadM SNP 0039.scaffold00152 659920 1 G A - ReadM INDEL 0039.scaffold00152 659961 3 TTA ... - ReadM SNP 0039.scaffold00152 660104 1 G T - ReadM SNP 0039.scaffold00152 660213 1 G C - ReadM SNP 0039.scaffold00152 660217 1 G A - ReadM SNP 0039.scaffold00152 660248 1 T C - ReadM SNP 0039.scaffold00152 660329 1 G A - ReadM INDEL 0039.scaffold00152 660353 2 .. TC - Both SNP 0039.scaffold00152 660465 1 G A scaffold2580 Both SNP 0039.scaffold00152 660501 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 660601 2 TG .. scaffold2580 ScafM INDEL 0039.scaffold00152 660604 5 GAGAG ..... scaffold2580 ScafM INDEL 0039.scaffold00152 660611 1 G . scaffold2580 ScafM SNP 0039.scaffold00152 660623 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 660664 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 660715 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 660729 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 660769 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 662283 1 G T scaffold688 ScafM SNP 0039.scaffold00152 662292 1 T G scaffold688 ScafM SNP 0039.scaffold00152 662324 1 A G scaffold688 ScafM SNP 0039.scaffold00152 662750 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 662769 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 662788 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 662985 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 662995 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 663000 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 663012 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 663025 2 TT CC scaffold2580 ScafM SNP 0039.scaffold00152 663079 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 663085 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 663091 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 663095 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 663123 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 663147 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 663169 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 663181 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 663232 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 663237 1 A C scaffold2580 ReadM SNP 0039.scaffold00152 665123 1 A G - ReadM SNP 0039.scaffold00152 665251 1 G A - ReadM SNP 0039.scaffold00152 665904 1 A G - ReadM SNP 0039.scaffold00152 665909 1 A C - ReadM SNP 0039.scaffold00152 665915 1 T C - ScafM SNP 0039.scaffold00152 668356 1 C G scaffold2580 ScafM INDEL 0039.scaffold00152 668417 2 TC .. scaffold2580 ScafM INDEL 0039.scaffold00152 668816 3 ... AAT scaffold2580 ScafM SNP 0039.scaffold00152 668852 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 668882 1 . G scaffold2580 ScafM INDEL 0039.scaffold00152 668957 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 668994 2 AT TA scaffold2580 ScafM SNP 0039.scaffold00152 669026 3 TTG AAT scaffold2580 ScafM SNP 0039.scaffold00152 669101 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 669115 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 669180 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 669249 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 669612 4 .... GTTA scaffold2580 Both SNP 0039.scaffold00152 669740 1 G A scaffold2580 Both SNP 0039.scaffold00152 669839 1 C T scaffold2580 Both SNP 0039.scaffold00152 670124 1 G A scaffold2580 Both SNP 0039.scaffold00152 670258 1 C G scaffold2580 Both SNP 0039.scaffold00152 670267 1 A C scaffold2580 Both SNP 0039.scaffold00152 670376 2 TG AA scaffold2580 Both SNP 0039.scaffold00152 670431 1 C T scaffold2580 Both INDEL 0039.scaffold00152 670649 1 . C scaffold2580 Both SNP 0039.scaffold00152 670672 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 670691 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 670705 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 670712 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 670715 1 T A scaffold2580 ReadM INDEL 0039.scaffold00152 670779 1 . G - ReadM SNP 0039.scaffold00152 670787 1 T G - ReadM INDEL 0039.scaffold00152 670850 1 . T - ReadM SNP 0039.scaffold00152 670855 1 T C - ReadM SNP 0039.scaffold00152 671102 1 G A - Both SNP 0039.scaffold00152 671211 1 T C scaffold2580 Both SNP 0039.scaffold00152 671225 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 671237 2 TG AA scaffold2580 Both SNP 0039.scaffold00152 671471 1 G A scaffold2580 Both SNP 0039.scaffold00152 671515 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 671549 2 TT AG scaffold2580 Both SNP 0039.scaffold00152 671620 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 671637 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 671639 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 671648 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 671689 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 671720 5 GGCTC ..... scaffold2580 ScafM INDEL 0039.scaffold00152 671727 23 GGAAACGTGAAACTGATATATCC ....................... scaffold2580 ScafM INDEL 0039.scaffold00152 671751 2 CC .. scaffold2580 ScafM INDEL 0039.scaffold00152 671756 11 TCCTTTTATGG ........... scaffold2580 ScafM SNP 0039.scaffold00152 671776 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 671787 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 671792 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 671910 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 671914 2 AA GG scaffold2580 ScafM SNP 0039.scaffold00152 671926 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 671958 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 671972 2 GT AA scaffold2580 ScafM SNP 0039.scaffold00152 672038 2 GC CA scaffold2580 Both SNP 0039.scaffold00152 672126 1 A G scaffold2580 Both INDEL 0039.scaffold00152 672226 1 A . scaffold2580 Both SNP 0039.scaffold00152 672229 1 A G scaffold2580 Both SNP 0039.scaffold00152 672241 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 672287 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 672291 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 672305 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 672310 1 T A scaffold2580 Both SNP 0039.scaffold00152 672400 1 T C scaffold2580 Both SNP 0039.scaffold00152 672635 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 672672 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 672675 2 TG CA scaffold2580 Both SNP 0039.scaffold00152 673091 1 T A scaffold2580 Both SNP 0039.scaffold00152 673129 1 A G scaffold2580 Both SNP 0039.scaffold00152 673514 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 673563 4 TTAT .... scaffold2580 ScafM SNP 0039.scaffold00152 673568 1 G C scaffold2580 ScafM INDEL 0039.scaffold00152 673754 1 . A scaffold2580 ScafM INDEL 0039.scaffold00152 673759 1 . G scaffold2580 Both SNP 0039.scaffold00152 673804 1 C T scaffold2580 Both SNP 0039.scaffold00152 673914 1 G T scaffold2580 Both SNP 0039.scaffold00152 673919 1 A C scaffold2580 Both SNP 0039.scaffold00152 674004 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 674145 1 C T - Both SNP 0039.scaffold00152 674240 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 676067 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 676088 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 676319 1 C T - ReadM SNP 0039.scaffold00152 676356 1 T A - ReadM SNP 0039.scaffold00152 676397 1 T C - ReadM SNP 0039.scaffold00152 676518 1 G C - ReadM SNP 0039.scaffold00152 676595 1 T A - ReadM SNP 0039.scaffold00152 676689 1 A G - ReadM INDEL 0039.scaffold00152 676797 1 T . - ReadM SNP 0039.scaffold00152 677179 1 C A - ReadM SNP 0039.scaffold00152 677367 1 G C - ReadM INDEL 0039.scaffold00152 677409 1 . C - ReadM SNP 0039.scaffold00152 677436 1 A G - ReadM SNP 0039.scaffold00152 677633 1 C G - ReadM SNP 0039.scaffold00152 677639 1 A G - ReadM SNP 0039.scaffold00152 677710 1 C T - ReadM SNP 0039.scaffold00152 677919 1 C T - ReadM SNP 0039.scaffold00152 678140 1 C T - ReadM SNP 0039.scaffold00152 678237 1 C A - ReadM SNP 0039.scaffold00152 678271 1 G A - ReadM SNP 0039.scaffold00152 678389 1 G C - ReadM SNP 0039.scaffold00152 678744 1 T C - ReadM SNP 0039.scaffold00152 678852 1 T C - ReadM INDEL 0039.scaffold00152 678902 1 T . - ScafM SNP 0039.scaffold00152 680374 1 C A scaffold2580 ReadM SNP 0039.scaffold00152 682748 1 A T - ReadM INDEL 0039.scaffold00152 697099 1 . A - ReadM SNP 0039.scaffold00152 697390 1 A G - ReadM SNP 0039.scaffold00152 697403 1 A T - ReadM SNP 0039.scaffold00152 697575 1 G T - ReadM SNP 0039.scaffold00152 698006 1 A G - ScafM SNP 0039.scaffold00152 698093 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 698339 1 C T - ReadM SNP 0039.scaffold00152 698390 1 T G - ReadM SNP 0039.scaffold00152 698762 1 T C - ReadM SNP 0039.scaffold00152 698833 1 G A - ReadM SNP 0039.scaffold00152 699100 1 T G - ReadM SNP 0039.scaffold00152 699169 1 C T - ReadM SNP 0039.scaffold00152 699259 1 T A - ReadM SNP 0039.scaffold00152 699283 1 T C - ReadM SNP 0039.scaffold00152 699294 1 T C - ReadM SNP 0039.scaffold00152 699343 1 T C - ScafM SNP 0039.scaffold00152 699519 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 699668 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 699690 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 699707 2 .. AT scaffold2580 ScafM SNP 0039.scaffold00152 699851 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 699863 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 699986 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 700052 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 700100 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 700368 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 700490 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 701493 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 701497 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 701578 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 701638 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 701666 1 T . scaffold2580 ScafM INDEL 0039.scaffold00152 701677 4 .... TAAG scaffold2580 ReadM SNP 0039.scaffold00152 701692 1 G A - ReadM SNP 0039.scaffold00152 701753 1 G A - ScafM SNP 0039.scaffold00152 701778 1 G A scaffold2580 Both INDEL 0039.scaffold00152 701780 1 A . scaffold2580 Both SNP 0039.scaffold00152 702016 1 C G scaffold2580 Both SNP 0039.scaffold00152 702165 1 G A scaffold2580 Both SNP 0039.scaffold00152 703222 1 A G scaffold2580 Both SNP 0039.scaffold00152 704070 1 G A scaffold2580 Both SNP 0039.scaffold00152 705034 1 C T scaffold2580 Both INDEL 0039.scaffold00152 705044 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 705078 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 705085 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 705090 1 C T scaffold2580 Both SNP 0039.scaffold00152 705150 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 705274 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 705284 2 AG TT scaffold2580 ScafM SNP 0039.scaffold00152 705292 1 A G scaffold2580 Both SNP 0039.scaffold00152 705353 1 A G scaffold2580 Both SNP 0039.scaffold00152 705421 1 C T scaffold2580 Both SNP 0039.scaffold00152 705680 1 C T scaffold2580 ReadM INDEL 0039.scaffold00152 705727 1 . A - Both SNP 0039.scaffold00152 705891 1 G T scaffold2580 Both SNP 0039.scaffold00152 705914 1 T C scaffold2580 Both SNP 0039.scaffold00152 705938 1 C T scaffold2580 Both INDEL 0039.scaffold00152 705984 2 TA .. scaffold2580 Both SNP 0039.scaffold00152 706144 1 G A scaffold2580 Both SNP 0039.scaffold00152 706204 1 T C scaffold2580 Both SNP 0039.scaffold00152 706268 1 A G scaffold2580 Both SNP 0039.scaffold00152 706342 1 A C scaffold2580 Both SNP 0039.scaffold00152 706393 1 C T scaffold2580 Both SNP 0039.scaffold00152 706468 1 T A scaffold2580 Both SNP 0039.scaffold00152 706488 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 706596 2 TG CC scaffold2580 Both SNP 0039.scaffold00152 706637 1 T G scaffold2580 Both SNP 0039.scaffold00152 706693 1 G C scaffold2580 Both SNP 0039.scaffold00152 706720 1 A G scaffold2580 ReadM INDEL 0039.scaffold00152 707017 2 AG .. - ReadM SNP 0039.scaffold00152 707342 1 T G - ReadM SNP 0039.scaffold00152 707372 1 C G - ReadM SNP 0039.scaffold00152 707393 1 G A - Both SNP 0039.scaffold00152 707560 1 G A scaffold2580 Both SNP 0039.scaffold00152 707602 1 A G scaffold2580 Both SNP 0039.scaffold00152 707632 1 G T scaffold2580 Both SNP 0039.scaffold00152 707702 1 A G scaffold2580 Both SNP 0039.scaffold00152 707774 1 C T scaffold2580 Both SNP 0039.scaffold00152 707829 1 C A scaffold2580 Both INDEL 0039.scaffold00152 707833 1 T . scaffold2580 Both SNP 0039.scaffold00152 707877 1 G A scaffold2580 Both SNP 0039.scaffold00152 707893 1 G T scaffold2580 Both SNP 0039.scaffold00152 708000 1 G A scaffold2580 Both SNP 0039.scaffold00152 708076 1 A T scaffold2580 Both SNP 0039.scaffold00152 708317 1 G A scaffold2580 Both SNP 0039.scaffold00152 708396 1 G T scaffold2580 Both SNP 0039.scaffold00152 708493 1 A C scaffold2580 Both SNP 0039.scaffold00152 708616 1 A G scaffold2580 Both SNP 0039.scaffold00152 708646 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 708712 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 709489 1 C A scaffold2580 Both SNP 0039.scaffold00152 709626 1 C G scaffold2580 Both SNP 0039.scaffold00152 709628 1 C A scaffold2580 Both SNP 0039.scaffold00152 709657 1 C T scaffold2580 Both SNP 0039.scaffold00152 709790 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 709815 1 G A scaffold2580 Both SNP 0039.scaffold00152 709845 1 C T scaffold2580 Both SNP 0039.scaffold00152 709854 1 T C scaffold2580 Both INDEL 0039.scaffold00152 709876 1 . G scaffold2580 Both SNP 0039.scaffold00152 710011 1 G A scaffold2580 Both SNP 0039.scaffold00152 710067 1 T C scaffold2580 Both SNP 0039.scaffold00152 710123 1 C G scaffold2580 Both SNP 0039.scaffold00152 710153 1 C G scaffold2580 Both SNP 0039.scaffold00152 710168 1 A C scaffold2580 Both SNP 0039.scaffold00152 710218 1 T C scaffold2580 Both SNP 0039.scaffold00152 710271 1 T C scaffold2580 Both INDEL 0039.scaffold00152 710312 1 . A scaffold2580 Both SNP 0039.scaffold00152 710393 1 T A scaffold2580 Both SNP 0039.scaffold00152 710438 1 T C scaffold2580 Both SNP 0039.scaffold00152 710448 1 G A scaffold2580 Both SNP 0039.scaffold00152 710528 1 T C scaffold2580 Both SNP 0039.scaffold00152 710575 1 T A scaffold2580 Both SNP 0039.scaffold00152 710619 1 T C scaffold2580 Both SNP 0039.scaffold00152 710640 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 710830 1 G C scaffold2580 ScafM INDEL 0039.scaffold00152 710870 3 ... GAA scaffold2580 ScafM SNP 0039.scaffold00152 710894 1 A G scaffold2580 Both SNP 0039.scaffold00152 710918 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 711266 3 ... ACG scaffold2580 Both SNP 0039.scaffold00152 711421 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 711516 1 G A scaffold2580 Both SNP 0039.scaffold00152 711598 2 TG CA scaffold2580 Both SNP 0039.scaffold00152 711753 1 G A scaffold2580 Both SNP 0039.scaffold00152 711778 1 A G scaffold2580 Both SNP 0039.scaffold00152 711788 1 A T scaffold2580 Both SNP 0039.scaffold00152 711875 1 G A scaffold2580 Both SNP 0039.scaffold00152 711897 1 A G scaffold2580 Both SNP 0039.scaffold00152 711913 1 G A scaffold2580 Both SNP 0039.scaffold00152 712001 1 A T scaffold2580 Both SNP 0039.scaffold00152 712027 1 C A scaffold2580 Both SNP 0039.scaffold00152 712029 1 G A scaffold2580 Both SNP 0039.scaffold00152 712157 1 G A scaffold2580 Both SNP 0039.scaffold00152 712195 1 A T scaffold2580 Both SNP 0039.scaffold00152 712218 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 712266 3 ATC ... scaffold2580 ScafM SNP 0039.scaffold00152 712271 1 T C scaffold2580 Both SNP 0039.scaffold00152 712448 1 A G scaffold2580 Both SNP 0039.scaffold00152 712471 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 712530 1 T C scaffold2580 Both SNP 0039.scaffold00152 712545 1 A G scaffold2580 Both SNP 0039.scaffold00152 712578 1 A C scaffold2580 Both SNP 0039.scaffold00152 712599 1 A G scaffold2580 Both SNP 0039.scaffold00152 712620 1 G A scaffold2580 Both SNP 0039.scaffold00152 712708 1 G T scaffold2580 Both SNP 0039.scaffold00152 712722 1 C G scaffold2580 Both SNP 0039.scaffold00152 712819 1 C T scaffold2580 Both SNP 0039.scaffold00152 712835 1 G A scaffold2580 Both SNP 0039.scaffold00152 712845 1 C G scaffold2580 Both SNP 0039.scaffold00152 712849 1 G A scaffold2580 Both SNP 0039.scaffold00152 712922 1 C A scaffold2580 Both INDEL 0039.scaffold00152 713031 2 GG .. scaffold2580 Both SNP 0039.scaffold00152 713066 1 G C scaffold2580 Both SNP 0039.scaffold00152 713298 1 G A scaffold2580 Both SNP 0039.scaffold00152 713308 1 T G scaffold2580 Both INDEL 0039.scaffold00152 713525 1 G . scaffold2580 ScafM SNP 0039.scaffold00152 713527 1 T A scaffold2580 Both SNP 0039.scaffold00152 713701 1 G A scaffold2580 Both SNP 0039.scaffold00152 713731 1 T G scaffold2580 Both SNP 0039.scaffold00152 713785 1 A G scaffold2580 Both SNP 0039.scaffold00152 713809 1 C T scaffold2580 Both SNP 0039.scaffold00152 713814 1 A G scaffold2580 Both SNP 0039.scaffold00152 713933 1 G T scaffold2580 Both SNP 0039.scaffold00152 713937 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 713984 1 T C - ScafM SNP 0039.scaffold00152 714199 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 714602 1 C T - ReadM SNP 0039.scaffold00152 714620 1 T A - ReadM SNP 0039.scaffold00152 714707 1 T A - Both SNP 0039.scaffold00152 715006 1 T A scaffold2580 Both SNP 0039.scaffold00152 715058 1 A T scaffold2580 Both SNP 0039.scaffold00152 715124 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 715131 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 715133 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 715208 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 715289 54 GAACAACCCGTGTAGCTTCACTACAATGAACTAAAAAGAGTGGTGCATGAATTT ...................................................... scaffold2580 ScafM SNP 0039.scaffold00152 715363 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 715390 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 715420 6 ...... AAAAAG scaffold2580 ScafM SNP 0039.scaffold00152 715495 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 715536 1 T C scaffold2580 Both SNP 0039.scaffold00152 715574 1 T A scaffold2580 Both SNP 0039.scaffold00152 715585 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 715661 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 715675 1 T A scaffold2580 Both SNP 0039.scaffold00152 715686 1 A G scaffold2580 Both SNP 0039.scaffold00152 715746 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 715936 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 715944 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 716320 1 G A scaffold2580 Both SNP 0039.scaffold00152 716335 1 T A scaffold2580 ReadM SNP 0039.scaffold00152 716561 1 G A - ReadM SNP 0039.scaffold00152 717027 1 A G - Both SNP 0039.scaffold00152 717157 1 T G scaffold2580 Both INDEL 0039.scaffold00152 717339 1 A . scaffold2580 ReadM SNP 0039.scaffold00152 717444 1 G A - ReadM INDEL 0039.scaffold00152 717459 2 CG .. - ReadM SNP 0039.scaffold00152 717643 1 T C - ReadM SNP 0039.scaffold00152 717742 1 A C - ReadM SNP 0039.scaffold00152 717926 1 G A - ReadM SNP 0039.scaffold00152 717938 1 T C - ReadM SNP 0039.scaffold00152 717943 1 T C - ScafM SNP 0039.scaffold00152 718005 2 TC AT scaffold2580 Both SNP 0039.scaffold00152 718063 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 718119 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 718123 2 TC CT scaffold2580 ScafM SNP 0039.scaffold00152 718129 1 A G scaffold2580 Both SNP 0039.scaffold00152 718243 1 T A scaffold2580 ReadM SNP 0039.scaffold00152 718466 1 T C - Both SNP 0039.scaffold00152 718748 1 C A scaffold2580 ReadM SNP 0039.scaffold00152 718957 1 T C - ReadM SNP 0039.scaffold00152 718968 1 G T - ReadM SNP 0039.scaffold00152 719010 1 T C - Both SNP 0039.scaffold00152 719165 1 T A scaffold2580 Both SNP 0039.scaffold00152 719353 1 C T scaffold2580 Both SNP 0039.scaffold00152 719395 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 719552 1 G T - ReadM SNP 0039.scaffold00152 719664 1 T G - ReadM INDEL 0039.scaffold00152 719692 1 . T - ReadM SNP 0039.scaffold00152 719825 1 A G - ReadM SNP 0039.scaffold00152 719854 1 A G - ReadM SNP 0039.scaffold00152 719945 1 A G - ReadM SNP 0039.scaffold00152 720009 1 C T - ReadM SNP 0039.scaffold00152 720048 1 A C - ReadM SNP 0039.scaffold00152 720204 1 G C - ReadM SNP 0039.scaffold00152 720364 1 T A - ReadM SNP 0039.scaffold00152 720533 1 T C - ReadM SNP 0039.scaffold00152 720607 1 C T - ReadM SNP 0039.scaffold00152 720646 1 C T - ReadM SNP 0039.scaffold00152 720672 1 G A - ScafM INDEL 0039.scaffold00152 720778 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 721340 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 721346 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 721360 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 721384 2 CA GG scaffold2580 ScafM SNP 0039.scaffold00152 721387 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 721397 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 721418 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 721430 2 TG CA scaffold2580 ScafM SNP 0039.scaffold00152 721438 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 721471 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 721510 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 721547 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 727799 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 727862 1 . A scaffold2580 ScafM INDEL 0039.scaffold00152 727874 16 ................ TGGCAAATAGTAATGA scaffold2580 ScafM SNP 0039.scaffold00152 727893 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 727900 6 ...... TTTGCC scaffold2580 ScafM INDEL 0039.scaffold00152 727901 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 727905 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 727920 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 727982 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 728005 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 728013 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 728026 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 728052 1 A G scaffold2580 Both SNP 0039.scaffold00152 728072 1 T C scaffold2580 Both SNP 0039.scaffold00152 728095 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 729979 1 T A scaffold2580 Both INDEL 0039.scaffold00152 736142 1 . C scaffold2580 ScafM SNP 0039.scaffold00152 736190 2 AT TA scaffold2580 Both SNP 0039.scaffold00152 736242 1 A C scaffold2580 Both SNP 0039.scaffold00152 736330 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 736391 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 736418 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 736419 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 736421 2 CT AA scaffold2580 ScafM INDEL 0039.scaffold00152 736423 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 736428 5 AAAGA CTCAT scaffold2580 ScafM SNP 0039.scaffold00152 736438 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 736468 1 A T scaffold2580 Both INDEL 0039.scaffold00152 736470 1 T . scaffold2580 Both SNP 0039.scaffold00152 736625 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 736817 1 A G scaffold2580 Both SNP 0039.scaffold00152 736919 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 737158 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 737218 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 737237 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 737243 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 737432 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 737499 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 737512 2 TT .. scaffold2580 ScafM INDEL 0039.scaffold00152 737524 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 737530 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 737605 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 737622 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 737635 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 737676 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 737680 1 G . scaffold2580 ScafM SNP 0039.scaffold00152 737687 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 737690 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 737705 4 .... GTTA scaffold2580 ScafM INDEL 0039.scaffold00152 737744 3 ... TAT scaffold2580 ScafM INDEL 0039.scaffold00152 737808 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 737823 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 737828 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 737844 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 737860 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 737922 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 737927 1 . G scaffold2580 ScafM INDEL 0039.scaffold00152 737984 2 .. TT scaffold2580 ScafM SNP 0039.scaffold00152 738098 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 738121 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 738146 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 738148 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 738155 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 738284 2 TT CG scaffold2580 ScafM SNP 0039.scaffold00152 738767 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 738833 2 .. AT scaffold2580 ScafM SNP 0039.scaffold00152 738851 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 738885 2 .. TC scaffold2580 ScafM SNP 0039.scaffold00152 738924 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 738959 29 ............................. CTTCTCAGTTTGCCTCTCTCTCTCTCTCT scaffold2580 Both SNP 0039.scaffold00152 738996 1 T C scaffold2580 Both SNP 0039.scaffold00152 739043 1 C T scaffold2580 Both SNP 0039.scaffold00152 739077 1 A T scaffold2580 Both SNP 0039.scaffold00152 739102 1 T A scaffold2580 Both SNP 0039.scaffold00152 739169 1 T G scaffold2580 ReadM SNP 0039.scaffold00152 739276 1 C T - ReadM SNP 0039.scaffold00152 739378 1 G A - ReadM SNP 0039.scaffold00152 739396 1 C G - ReadM SNP 0039.scaffold00152 739525 1 T C - Both SNP 0039.scaffold00152 739662 1 G A scaffold2580 Both SNP 0039.scaffold00152 739665 1 C T scaffold2580 Both SNP 0039.scaffold00152 739671 1 T C scaffold2580 Both SNP 0039.scaffold00152 739737 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 739742 2 CC TT scaffold2580 Both SNP 0039.scaffold00152 739877 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 739932 1 T C scaffold2580 Both SNP 0039.scaffold00152 739948 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 740316 1 G A - ScafM SNP 0039.scaffold00152 740612 1 C T scaffold2580 ReadM INDEL 0039.scaffold00152 740718 1 . A - ReadM INDEL 0039.scaffold00152 740847 1 A . - ReadM SNP 0039.scaffold00152 740949 1 A G - ReadM SNP 0039.scaffold00152 741968 1 G T - ReadM INDEL 0039.scaffold00152 741971 1 A . - ReadM SNP 0039.scaffold00152 742076 1 A G - ReadM SNP 0039.scaffold00152 742094 1 G T - ReadM SNP 0039.scaffold00152 742318 1 T C - ScafM SNP 0039.scaffold00152 742799 1 A G scaffold5506 ReadM SNP 0039.scaffold00152 742959 1 A G - ScafM SNP 0039.scaffold00152 743304 1 C A scaffold5506 ScafM SNP 0039.scaffold00152 743340 1 A C scaffold5506 ScafM SNP 0039.scaffold00152 743348 1 C T scaffold5506 ScafM SNP 0039.scaffold00152 743360 1 T A scaffold5506 ScafM SNP 0039.scaffold00152 743495 1 T A scaffold5506 ReadM SNP 0039.scaffold00152 744526 1 T A - ReadM SNP 0039.scaffold00152 744921 1 C T - ReadM SNP 0039.scaffold00152 744981 1 A G - ReadM SNP 0039.scaffold00152 744991 1 T G - Both SNP 0039.scaffold00152 745030 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 745369 1 T A - Both SNP 0039.scaffold00152 745652 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 745724 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 745726 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 745733 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 745741 1 G A scaffold2580 Both SNP 0039.scaffold00152 745817 1 A T scaffold2580 ReadM SNP 0039.scaffold00152 745915 1 A C - ReadM SNP 0039.scaffold00152 746062 1 A T - ReadM SNP 0039.scaffold00152 746156 1 A C - ReadM SNP 0039.scaffold00152 746206 1 A T - ReadM SNP 0039.scaffold00152 746285 1 T C - ReadM SNP 0039.scaffold00152 746324 1 C T - ReadM INDEL 0039.scaffold00152 746396 1 T . - ReadM INDEL 0039.scaffold00152 746427 1 A . - ReadM SNP 0039.scaffold00152 746480 1 C T - ReadM SNP 0039.scaffold00152 746593 1 C A - ReadM SNP 0039.scaffold00152 746609 1 C G - ReadM SNP 0039.scaffold00152 746649 1 C T - ReadM SNP 0039.scaffold00152 746670 1 C T - ReadM SNP 0039.scaffold00152 746794 1 T C - ReadM SNP 0039.scaffold00152 747537 1 T A - ReadM SNP 0039.scaffold00152 747557 1 G T - ReadM SNP 0039.scaffold00152 747624 1 A G - ReadM SNP 0039.scaffold00152 747660 1 A T - ReadM SNP 0039.scaffold00152 747686 1 T C - ReadM SNP 0039.scaffold00152 747751 1 A T - ReadM SNP 0039.scaffold00152 747774 1 C A - ReadM SNP 0039.scaffold00152 748203 1 A C - ReadM SNP 0039.scaffold00152 748250 1 A T - ReadM SNP 0039.scaffold00152 748269 1 C A - ReadM SNP 0039.scaffold00152 748434 1 T C - ReadM SNP 0039.scaffold00152 748470 1 G A - ReadM SNP 0039.scaffold00152 748519 1 C T - ReadM SNP 0039.scaffold00152 748553 1 T A - ReadM SNP 0039.scaffold00152 748633 1 T C - ReadM SNP 0039.scaffold00152 748641 1 A T - Both SNP 0039.scaffold00152 749075 1 T C scaffold2580 Both SNP 0039.scaffold00152 749130 1 G T scaffold2580 Both SNP 0039.scaffold00152 749164 1 G A scaffold2580 Both SNP 0039.scaffold00152 749190 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 749240 1 C G - ReadM SNP 0039.scaffold00152 749327 1 A C - ReadM SNP 0039.scaffold00152 749448 1 C T - ReadM SNP 0039.scaffold00152 749642 1 G C - ReadM SNP 0039.scaffold00152 749720 1 C A - ReadM SNP 0039.scaffold00152 749733 1 T G - Both SNP 0039.scaffold00152 749899 1 T G scaffold2580 Both SNP 0039.scaffold00152 749983 1 A G scaffold2580 Both SNP 0039.scaffold00152 749987 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 750007 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 750021 3 ... TGA scaffold2580 Both INDEL 0039.scaffold00152 750061 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 750072 1 T G scaffold2580 ReadM SNP 0039.scaffold00152 750219 1 G T - Both SNP 0039.scaffold00152 750337 1 C T scaffold2580 Both SNP 0039.scaffold00152 750366 1 C A scaffold2580 Both SNP 0039.scaffold00152 750464 1 T C scaffold2580 Both SNP 0039.scaffold00152 750696 1 A G scaffold2580 Both SNP 0039.scaffold00152 750731 1 C T scaffold2580 Both SNP 0039.scaffold00152 750853 1 G A scaffold2580 Both SNP 0039.scaffold00152 750863 1 G T scaffold2580 Both SNP 0039.scaffold00152 750958 1 T A scaffold2580 Both INDEL 0039.scaffold00152 750965 1 T . scaffold2580 Both SNP 0039.scaffold00152 751113 1 A G scaffold2580 Both SNP 0039.scaffold00152 751132 1 C G scaffold2580 Both SNP 0039.scaffold00152 751201 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 751231 1 G T scaffold2580 Both SNP 0039.scaffold00152 751234 1 C T scaffold2580 Both SNP 0039.scaffold00152 751414 1 G A scaffold2580 Both SNP 0039.scaffold00152 751442 1 T G scaffold2580 Both SNP 0039.scaffold00152 751513 1 G A scaffold2580 Both SNP 0039.scaffold00152 751545 1 T A scaffold2580 Both SNP 0039.scaffold00152 751721 1 T C scaffold2580 Both INDEL 0039.scaffold00152 751764 1 G . scaffold2580 ReadM SNP 0039.scaffold00152 751817 1 C T - ReadM SNP 0039.scaffold00152 751889 1 T C - ReadM SNP 0039.scaffold00152 751971 1 C T - ReadM SNP 0039.scaffold00152 752107 1 T G - ReadM SNP 0039.scaffold00152 752176 1 A C - ReadM SNP 0039.scaffold00152 752180 1 T C - ReadM INDEL 0039.scaffold00152 752186 1 . C - ReadM SNP 0039.scaffold00152 752267 1 T A - ReadM SNP 0039.scaffold00152 752497 1 T C - ScafM SNP 0039.scaffold00152 752593 1 G A scaffold2580 Both INDEL 0039.scaffold00152 752709 1 . T scaffold2580 Both SNP 0039.scaffold00152 752759 1 A G scaffold2580 Both SNP 0039.scaffold00152 752876 1 T C scaffold2580 Both SNP 0039.scaffold00152 752900 1 G A scaffold2580 Both SNP 0039.scaffold00152 752915 1 G T scaffold2580 Both SNP 0039.scaffold00152 752945 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 753057 1 T C - ReadM SNP 0039.scaffold00152 753182 1 T C - ReadM SNP 0039.scaffold00152 753184 1 G A - ReadM SNP 0039.scaffold00152 753378 1 C T - ReadM INDEL 0039.scaffold00152 753665 2 CA .. - ReadM SNP 0039.scaffold00152 753795 1 C T - ReadM SNP 0039.scaffold00152 753812 1 C A - Both SNP 0039.scaffold00152 753880 1 C G scaffold2580 Both SNP 0039.scaffold00152 753918 1 G A scaffold2580 Both SNP 0039.scaffold00152 753938 2 AA GG scaffold2580 Both SNP 0039.scaffold00152 754101 1 A T scaffold2580 Both SNP 0039.scaffold00152 754121 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 755512 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 755670 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 755701 1 C A scaffold2580 ScafM INDEL 0039.scaffold00152 756022 3 TTT ... scaffold2580 ScafM SNP 0039.scaffold00152 756157 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 756221 2 AT .. scaffold2580 ScafM SNP 0039.scaffold00152 756651 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 756701 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 756792 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 756816 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 756819 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 757226 1 C T - ScafM SNP 0039.scaffold00152 757341 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 757359 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 757395 1 . C scaffold2580 Both SNP 0039.scaffold00152 758045 1 C T scaffold2580 Both SNP 0039.scaffold00152 758149 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 758376 1 . A scaffold2580 ReadM INDEL 0039.scaffold00152 758377 1 . G - ReadM SNP 0039.scaffold00152 758525 1 C G - ScafM SNP 0039.scaffold00152 758777 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 758782 2 AA GG scaffold2580 Both SNP 0039.scaffold00152 758948 1 A G scaffold2580 Both SNP 0039.scaffold00152 758953 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 759046 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 759071 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 759091 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 759119 1 T C scaffold2580 Both SNP 0039.scaffold00152 759263 1 G A scaffold2580 Both SNP 0039.scaffold00152 759314 1 A T scaffold2580 Both SNP 0039.scaffold00152 759363 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 759469 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 759539 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 759961 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 759963 1 T . scaffold2580 ScafM INDEL 0039.scaffold00152 760025 1 . A scaffold2580 ScafM INDEL 0039.scaffold00152 760114 1 G . scaffold2580 ScafM SNP 0039.scaffold00152 760156 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 760174 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 760202 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 760214 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 760489 2 TA CT scaffold2580 ReadM SNP 0039.scaffold00152 760730 1 A G - ReadM INDEL 0039.scaffold00152 761026 1 . G - ReadM SNP 0039.scaffold00152 761242 1 T G - ReadM SNP 0039.scaffold00152 761311 1 A T - ReadM SNP 0039.scaffold00152 761367 1 C T - ReadM INDEL 0039.scaffold00152 761382 1 . T - Both SNP 0039.scaffold00152 761419 1 G C scaffold2580 Both SNP 0039.scaffold00152 761560 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 761637 4 .... AATT scaffold2580 Both SNP 0039.scaffold00152 761739 1 G A scaffold2580 Both INDEL 0039.scaffold00152 761762 1 A . scaffold2580 Both SNP 0039.scaffold00152 761776 1 C A scaffold2580 Both SNP 0039.scaffold00152 761876 1 A G scaffold2580 Both SNP 0039.scaffold00152 761894 1 T C scaffold2580 Both SNP 0039.scaffold00152 761987 1 A G scaffold2580 Both SNP 0039.scaffold00152 761997 1 A C scaffold2580 Both SNP 0039.scaffold00152 762014 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 762258 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 762265 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 762272 1 T C scaffold2580 Both SNP 0039.scaffold00152 762287 1 T C scaffold2580 Both SNP 0039.scaffold00152 762310 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 762399 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 762431 1 A C scaffold2580 Both SNP 0039.scaffold00152 762440 1 G T scaffold2580 Both SNP 0039.scaffold00152 762486 1 G A scaffold2580 Both SNP 0039.scaffold00152 762703 1 C T scaffold2580 ReadM SNP 0039.scaffold00152 762808 1 C T - ReadM SNP 0039.scaffold00152 763221 1 T C - ReadM SNP 0039.scaffold00152 763242 1 G C - ScafM SNP 0039.scaffold00152 763469 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 763474 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 763482 4 .... CACT scaffold2580 ScafM SNP 0039.scaffold00152 763485 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 763518 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 763527 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 763545 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 763548 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 763550 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 763554 1 C . scaffold2580 ScafM SNP 0039.scaffold00152 763558 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 763573 2 TT CC scaffold2580 ScafM SNP 0039.scaffold00152 763589 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 763617 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 763631 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 763674 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 763745 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 763748 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 763772 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 763816 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 763818 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 763837 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 763849 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 764252 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 764292 1 A . scaffold2580 Both SNP 0039.scaffold00152 764510 1 T C scaffold2580 Both SNP 0039.scaffold00152 764579 1 A G scaffold2580 Both SNP 0039.scaffold00152 764654 1 C T scaffold2580 Both SNP 0039.scaffold00152 764755 1 G A scaffold2580 ReadM INDEL 0039.scaffold00152 764911 1 A . - ReadM SNP 0039.scaffold00152 764952 1 T C - ReadM SNP 0039.scaffold00152 764954 1 G A - ReadM SNP 0039.scaffold00152 764959 1 A T - ReadM SNP 0039.scaffold00152 765034 1 T C - ReadM SNP 0039.scaffold00152 765138 1 T A - Both SNP 0039.scaffold00152 765209 1 T C scaffold2580 Both SNP 0039.scaffold00152 765267 1 T A scaffold2580 Both SNP 0039.scaffold00152 765446 1 T C scaffold2580 Both SNP 0039.scaffold00152 765556 1 T A scaffold2580 Both SNP 0039.scaffold00152 765578 1 A G scaffold2580 Both SNP 0039.scaffold00152 765629 1 G T scaffold2580 Both SNP 0039.scaffold00152 765646 1 T A scaffold2580 Both SNP 0039.scaffold00152 765813 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 765919 1 T C - ReadM SNP 0039.scaffold00152 765947 1 G A - ReadM SNP 0039.scaffold00152 765977 1 A G - ReadM SNP 0039.scaffold00152 766071 1 G A - ReadM SNP 0039.scaffold00152 766091 1 G A - ReadM SNP 0039.scaffold00152 766151 1 T C - ReadM SNP 0039.scaffold00152 766239 1 G A - ReadM SNP 0039.scaffold00152 766284 1 C T - ReadM SNP 0039.scaffold00152 766293 1 C T - Both SNP 0039.scaffold00152 766488 1 G T scaffold2580 Both SNP 0039.scaffold00152 766499 1 C T scaffold2580 Both SNP 0039.scaffold00152 766513 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 766549 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 766573 1 G C scaffold2580 ScafM INDEL 0039.scaffold00152 766596 7 ATCCTTT ....... scaffold2580 Both INDEL 0039.scaffold00152 766706 1 . A scaffold2580 Both SNP 0039.scaffold00152 766801 1 G A scaffold2580 Both SNP 0039.scaffold00152 766856 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 766903 2 .. TC scaffold2580 Both SNP 0039.scaffold00152 767137 1 T A scaffold2580 Both SNP 0039.scaffold00152 767155 1 T C scaffold2580 ReadM INDEL 0039.scaffold00152 767236 2 TA .. - ReadM SNP 0039.scaffold00152 767340 1 G T - ReadM SNP 0039.scaffold00152 767382 1 A G - ReadM SNP 0039.scaffold00152 767403 1 C T - Both SNP 0039.scaffold00152 767530 1 A G scaffold2580 Both SNP 0039.scaffold00152 767622 1 T C scaffold2580 Both SNP 0039.scaffold00152 767747 1 C G scaffold2580 ReadM SNP 0039.scaffold00152 767773 1 A G - ReadM SNP 0039.scaffold00152 767838 1 G T - ReadM SNP 0039.scaffold00152 767932 1 A G - ReadM SNP 0039.scaffold00152 767957 1 G A - ReadM SNP 0039.scaffold00152 768121 1 C T - ReadM SNP 0039.scaffold00152 768146 1 T G - ReadM SNP 0039.scaffold00152 768220 1 A T - ReadM SNP 0039.scaffold00152 768306 1 G A - ReadM SNP 0039.scaffold00152 768396 1 T C - ReadM SNP 0039.scaffold00152 768468 1 A G - ReadM SNP 0039.scaffold00152 768640 1 C G - ReadM SNP 0039.scaffold00152 768808 1 T G - ReadM SNP 0039.scaffold00152 768820 1 T C - ReadM SNP 0039.scaffold00152 768838 1 G A - ReadM SNP 0039.scaffold00152 768926 1 G A - ReadM SNP 0039.scaffold00152 769076 1 A G - ReadM SNP 0039.scaffold00152 769158 1 G A - ReadM SNP 0039.scaffold00152 769179 1 G A - Both INDEL 0039.scaffold00152 769685 2 AG .. scaffold2580 ScafM INDEL 0039.scaffold00152 769965 15 ............... AGCCCAAATGGCTGG scaffold2580 Both INDEL 0039.scaffold00152 770059 1 A . scaffold2580 Both SNP 0039.scaffold00152 770107 1 G A scaffold2580 Both SNP 0039.scaffold00152 770153 1 A G scaffold2580 Both SNP 0039.scaffold00152 770345 1 G T scaffold2580 Both SNP 0039.scaffold00152 770491 1 T G scaffold2580 Both SNP 0039.scaffold00152 770611 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 771648 1 A G scaffold2580 Both SNP 0039.scaffold00152 771693 1 A G scaffold2580 Both SNP 0039.scaffold00152 771880 1 A T scaffold2580 Both INDEL 0039.scaffold00152 772242 2 AA .. scaffold2580 Both SNP 0039.scaffold00152 772337 1 G A scaffold2580 Both SNP 0039.scaffold00152 772471 1 A C scaffold2580 Both SNP 0039.scaffold00152 772643 1 G A scaffold2580 Both SNP 0039.scaffold00152 772874 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 772964 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 772966 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 773141 1 C T scaffold2580 Both SNP 0039.scaffold00152 773749 1 A G scaffold2580 Both SNP 0039.scaffold00152 773803 1 A G scaffold2580 Both SNP 0039.scaffold00152 773842 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 774097 16 ................ TCAACTAAAAATTAGA scaffold2580 ScafM SNP 0039.scaffold00152 774130 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 774135 1 T C scaffold2580 Both SNP 0039.scaffold00152 774155 1 T C scaffold2580 Both SNP 0039.scaffold00152 774360 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 774659 2 .. AT scaffold2580 ScafM SNP 0039.scaffold00152 774682 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 774685 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 774691 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 774840 3 ... AAA scaffold2580 Both SNP 0039.scaffold00152 775051 1 G A scaffold2580 Both SNP 0039.scaffold00152 775386 1 G A scaffold2580 Both SNP 0039.scaffold00152 775459 1 A G scaffold2580 Both SNP 0039.scaffold00152 775486 1 G A scaffold2580 Both INDEL 0039.scaffold00152 775519 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 775552 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 775559 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 775602 1 . C scaffold2580 ScafM SNP 0039.scaffold00152 775610 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 775624 2 TT .. scaffold2580 ScafM SNP 0039.scaffold00152 775752 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 775765 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 775773 2 TT .. scaffold2580 ScafM SNP 0039.scaffold00152 775823 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 775833 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 775842 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 775862 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 776316 1 A G - ReadM SNP 0039.scaffold00152 776416 1 G A - ReadM SNP 0039.scaffold00152 776528 1 T C - ReadM SNP 0039.scaffold00152 776618 1 C T - ReadM SNP 0039.scaffold00152 776628 1 C A - ScafM SNP 0039.scaffold00152 776955 1 G A scaffold2580 Both SNP 0039.scaffold00152 777237 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 777284 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 777311 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 777355 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 777382 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 777407 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 777458 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 777493 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 777502 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 777517 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 777912 10 .......... GCCCGATATA scaffold2580 ScafM SNP 0039.scaffold00152 791255 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 791337 2 TG CT scaffold2580 Both INDEL 0039.scaffold00152 791375 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 791436 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 791459 7 ....... ACGTTGC scaffold2580 ScafM INDEL 0039.scaffold00152 791587 1 C . scaffold2580 ScafM SNP 0039.scaffold00152 791636 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 791643 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 791669 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 791747 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 791813 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 792417 6 ...... AATGGA scaffold2580 ScafM SNP 0039.scaffold00152 792507 1 T A scaffold2580 Both SNP 0039.scaffold00152 792532 1 A T scaffold2580 Both SNP 0039.scaffold00152 792594 1 G A scaffold2580 Both SNP 0039.scaffold00152 792598 1 A T scaffold2580 Both SNP 0039.scaffold00152 792682 1 C T scaffold2580 Both SNP 0039.scaffold00152 792710 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 792776 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 792801 6 ...... ATTACC scaffold2580 ReadM SNP 0039.scaffold00152 793023 1 C G - ReadM SNP 0039.scaffold00152 793038 1 G T - ReadM SNP 0039.scaffold00152 793064 1 A C - ReadM INDEL 0039.scaffold00152 793136 1 . T - ReadM SNP 0039.scaffold00152 793177 1 A G - ReadM SNP 0039.scaffold00152 793339 1 A T - ReadM SNP 0039.scaffold00152 793402 1 A G - ReadM SNP 0039.scaffold00152 793436 1 T G - ReadM SNP 0039.scaffold00152 793439 1 G A - Both SNP 0039.scaffold00152 793660 1 G T scaffold2580 ReadM SNP 0039.scaffold00152 793960 1 A G - ReadM SNP 0039.scaffold00152 794116 1 C T - ReadM SNP 0039.scaffold00152 794142 1 C A - ReadM SNP 0039.scaffold00152 794237 1 G T - ReadM SNP 0039.scaffold00152 794266 1 G A - ReadM SNP 0039.scaffold00152 794447 1 T C - ReadM SNP 0039.scaffold00152 794477 1 C T - Both SNP 0039.scaffold00152 794557 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 794617 2 AT .. scaffold2580 ScafM SNP 0039.scaffold00152 794696 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 794765 10 CAGGTGGTGG .......... scaffold2580 ScafM INDEL 0039.scaffold00152 794776 3 GGG ... scaffold2580 ReadM SNP 0039.scaffold00152 797753 1 G T - ReadM SNP 0039.scaffold00152 797773 1 C T - ReadM SNP 0039.scaffold00152 797875 1 T A - ReadM SNP 0039.scaffold00152 797903 1 T G - ReadM SNP 0039.scaffold00152 797983 1 C T - ReadM SNP 0039.scaffold00152 798065 1 C T - ReadM SNP 0039.scaffold00152 798120 1 T C - ReadM SNP 0039.scaffold00152 798497 1 C T - ScafM SNP 0039.scaffold00152 799700 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 799714 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 799739 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 799760 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 799772 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 800184 1 A G - ReadM SNP 0039.scaffold00152 800679 1 C G - ReadM SNP 0039.scaffold00152 800699 1 A G - ReadM INDEL 0039.scaffold00152 800701 1 . C - Both SNP 0039.scaffold00152 801125 1 T C scaffold2580 Both SNP 0039.scaffold00152 801257 1 C T scaffold2580 Both SNP 0039.scaffold00152 801307 1 A T scaffold2580 Both SNP 0039.scaffold00152 801347 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 801403 2 GG AA scaffold2580 ScafM SNP 0039.scaffold00152 801410 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 801421 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 801423 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 801430 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 801439 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 801446 1 . C scaffold2580 ScafM INDEL 0039.scaffold00152 801449 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 801476 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 801487 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 801495 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 801529 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 801531 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 801533 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 801546 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 801571 2 AA GG scaffold2580 Both SNP 0039.scaffold00152 801606 1 G C scaffold2580 Both SNP 0039.scaffold00152 801705 1 G A scaffold2580 Both SNP 0039.scaffold00152 801783 1 A T scaffold2580 Both SNP 0039.scaffold00152 801857 1 G C scaffold2580 Both SNP 0039.scaffold00152 801867 1 G A scaffold2580 Both SNP 0039.scaffold00152 801976 1 T G scaffold2580 Both SNP 0039.scaffold00152 802021 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 802064 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 802067 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 802071 1 C T scaffold2580 Both SNP 0039.scaffold00152 802193 1 C G scaffold2580 Both SNP 0039.scaffold00152 802225 1 A G scaffold2580 Both SNP 0039.scaffold00152 802270 1 C T scaffold2580 Both SNP 0039.scaffold00152 802350 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 802371 1 G A scaffold2580 Both SNP 0039.scaffold00152 802535 1 C T scaffold2580 Both SNP 0039.scaffold00152 802646 1 G T scaffold2580 Both SNP 0039.scaffold00152 802650 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 802659 7 ....... AAAAAAG scaffold2580 Both SNP 0039.scaffold00152 802715 1 G A scaffold2580 Both SNP 0039.scaffold00152 802732 1 G A scaffold2580 Both SNP 0039.scaffold00152 802775 1 T C scaffold2580 Both SNP 0039.scaffold00152 802796 1 T A scaffold2580 Both SNP 0039.scaffold00152 802802 1 C T scaffold2580 Both SNP 0039.scaffold00152 802870 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 802882 5 TTTCA ....G scaffold2580 Both SNP 0039.scaffold00152 802986 1 A C scaffold2580 Both SNP 0039.scaffold00152 803003 1 T C scaffold2580 Both SNP 0039.scaffold00152 803104 1 A T scaffold2580 Both SNP 0039.scaffold00152 803114 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 803141 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 803143 2 AT GC scaffold2580 Both SNP 0039.scaffold00152 803163 1 C A scaffold2580 Both SNP 0039.scaffold00152 803220 1 A G scaffold2580 Both SNP 0039.scaffold00152 803443 1 G A scaffold2580 Both SNP 0039.scaffold00152 803531 1 C T scaffold2580 Both INDEL 0039.scaffold00152 803683 2 TT .. scaffold2580 Both SNP 0039.scaffold00152 803703 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 803733 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 803749 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 803776 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 803780 11 ........... CCCCCCCCAAG scaffold2580 ScafM INDEL 0039.scaffold00152 803792 8 ........ AACCCTCT scaffold2580 ScafM SNP 0039.scaffold00152 803812 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 803825 2 GA TT scaffold2580 Both SNP 0039.scaffold00152 804042 1 A T scaffold2580 Both SNP 0039.scaffold00152 804060 1 T G scaffold2580 Both SNP 0039.scaffold00152 804079 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 804121 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 804128 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804171 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 804181 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804187 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 804201 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 804206 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 804208 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 804210 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 804227 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 804236 7 ....... TAGCTAT scaffold2580 ScafM INDEL 0039.scaffold00152 804248 1 G . scaffold2580 ScafM SNP 0039.scaffold00152 804255 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 804263 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 804284 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 804286 2 TT CC scaffold2580 ScafM SNP 0039.scaffold00152 804295 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 804320 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 804376 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804386 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804390 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 804392 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804415 2 GA AG scaffold2580 ScafM SNP 0039.scaffold00152 804431 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804447 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804453 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804478 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804496 2 GA AC scaffold2580 ScafM SNP 0039.scaffold00152 804514 2 AC TT scaffold2580 ScafM SNP 0039.scaffold00152 804529 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 804533 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 804536 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 804540 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 804562 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 804571 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 804590 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 804616 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 804618 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 804634 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 804645 1 A G scaffold2580 Both SNP 0039.scaffold00152 804686 1 A C scaffold2580 Both INDEL 0039.scaffold00152 804710 1 . T scaffold2580 Both SNP 0039.scaffold00152 804761 1 G C scaffold2580 Both SNP 0039.scaffold00152 804765 1 A G scaffold2580 Both INDEL 0039.scaffold00152 804809 1 . T scaffold2580 Both SNP 0039.scaffold00152 804869 1 A G scaffold2580 Both SNP 0039.scaffold00152 804911 1 G A scaffold2580 Both SNP 0039.scaffold00152 804999 1 G A scaffold2580 Both SNP 0039.scaffold00152 805009 1 C T scaffold2580 Both SNP 0039.scaffold00152 805021 1 C T scaffold2580 Both SNP 0039.scaffold00152 805102 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 805117 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 805143 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 805177 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 805197 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805212 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805214 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 805251 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 805254 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805258 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 805260 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 805281 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805289 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805313 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 805331 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 805351 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805357 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 805371 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 805374 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 805383 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 805391 3 GAC ..T scaffold2580 ScafM SNP 0039.scaffold00152 805434 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 805436 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 805443 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805482 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 805505 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 805517 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 805550 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 805561 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805574 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805592 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805623 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 805634 2 CG TA scaffold2580 ScafM INDEL 0039.scaffold00152 805655 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 805658 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805675 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 805698 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805704 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 805707 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 805741 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 805760 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 805763 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 805767 2 .T GA scaffold2580 ScafM SNP 0039.scaffold00152 805809 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 805843 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 805893 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 805909 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 805919 20 TTGACAACAAATTAGTATTA .................... scaffold2580 ScafM INDEL 0039.scaffold00152 805941 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 805962 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 805974 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 805985 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 805987 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 806000 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 806058 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 806074 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 806105 1 C T scaffold2580 Both SNP 0039.scaffold00152 806112 1 A G scaffold2580 Both SNP 0039.scaffold00152 806158 1 A T scaffold2580 Both SNP 0039.scaffold00152 806236 1 C T scaffold2580 Both SNP 0039.scaffold00152 806279 1 A G scaffold2580 Both SNP 0039.scaffold00152 806344 1 A T scaffold2580 Both SNP 0039.scaffold00152 806354 1 T C scaffold2580 Both INDEL 0039.scaffold00152 806497 1 T . scaffold2580 Both SNP 0039.scaffold00152 806521 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 806617 2 AA GG scaffold2580 Both SNP 0039.scaffold00152 806622 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 806781 2 TC GT scaffold2580 Both SNP 0039.scaffold00152 806897 1 A G scaffold2580 Both SNP 0039.scaffold00152 806946 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 807009 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 807016 1 G A scaffold2580 Both SNP 0039.scaffold00152 807027 1 G T scaffold2580 Both SNP 0039.scaffold00152 807066 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 807146 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 807172 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 807209 5 ..... ATATT scaffold2580 Both SNP 0039.scaffold00152 807418 1 C T scaffold2580 Both SNP 0039.scaffold00152 807786 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 807905 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 808041 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 808052 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 808099 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 808102 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 808112 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 808117 2 TT AA scaffold2580 ScafM SNP 0039.scaffold00152 808127 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 808497 1 T . scaffold2580 ScafM INDEL 0039.scaffold00152 808506 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 808512 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 808519 2 CG TA scaffold2580 ScafM SNP 0039.scaffold00152 808662 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 808666 1 C . scaffold2580 ScafM INDEL 0039.scaffold00152 808669 3 ..A CGG scaffold2580 ScafM SNP 0039.scaffold00152 808673 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 808692 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 808694 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 808709 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 808723 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 808759 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 808783 4 TTAT .... scaffold2580 ScafM INDEL 0039.scaffold00152 808794 3 ATA ... scaffold2580 ScafM INDEL 0039.scaffold00152 808798 6 TATTTA ...... scaffold2580 ScafM SNP 0039.scaffold00152 808810 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 808824 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 808842 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 808855 2 AG GC scaffold2580 ScafM INDEL 0039.scaffold00152 808878 9 ........G AATTTTAAT scaffold2580 ScafM SNP 0039.scaffold00152 808902 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 808941 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 808972 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 809001 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 809120 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 809138 2 AA GG scaffold2580 ScafM SNP 0039.scaffold00152 809142 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 809145 2 GC TT scaffold2580 ScafM SNP 0039.scaffold00152 809159 2 GA AG scaffold2580 ScafM SNP 0039.scaffold00152 809167 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 809174 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 809177 2 AA TG scaffold2580 ScafM SNP 0039.scaffold00152 809182 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 809187 2 GT AC scaffold2580 ScafM SNP 0039.scaffold00152 809193 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 809196 2 TC CT scaffold2580 ScafM SNP 0039.scaffold00152 809200 2 CT TC scaffold2580 ScafM SNP 0039.scaffold00152 809203 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 809210 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 809217 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 809219 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 809221 2 GC AA scaffold2580 ScafM INDEL 0039.scaffold00152 809225 1 . A scaffold2580 ScafM SNP 0039.scaffold00152 809234 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 809236 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 809239 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 809249 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 809254 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 809264 2 CT TC scaffold2580 ScafM SNP 0039.scaffold00152 809270 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 809283 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 809291 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 809295 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 810285 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 810321 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 810327 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 810339 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 810347 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 810379 2 TG CA scaffold2580 ScafM INDEL 0039.scaffold00152 810400 1 . T scaffold2580 ScafM INDEL 0039.scaffold00152 810402 2 .. TT scaffold2580 ScafM SNP 0039.scaffold00152 810408 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 810411 2 CA TG scaffold2580 ScafM INDEL 0039.scaffold00152 810443 1 T . scaffold2580 ScafM SNP 0039.scaffold00152 811687 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 811695 2 CA TG scaffold2580 ScafM SNP 0039.scaffold00152 811699 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 811708 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 811714 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 811720 2 .A GG scaffold2580 ScafM SNP 0039.scaffold00152 811725 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 811731 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 811762 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 811766 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 811791 1 C A scaffold2580 Both SNP 0039.scaffold00152 811851 1 G A scaffold2580 Both SNP 0039.scaffold00152 811875 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 811984 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 811992 1 T A scaffold2580 Both SNP 0039.scaffold00152 812076 1 G C scaffold2580 Both SNP 0039.scaffold00152 812122 1 T C scaffold2580 Both SNP 0039.scaffold00152 812145 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 812306 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 812312 3 TTA ... scaffold2580 ScafM SNP 0039.scaffold00152 812319 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 812325 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 812339 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 812361 1 G A scaffold2580 Both SNP 0039.scaffold00152 812410 1 T A scaffold2580 Both INDEL 0039.scaffold00152 812466 2 GG .. scaffold2580 Both SNP 0039.scaffold00152 812502 1 C T scaffold2580 Both SNP 0039.scaffold00152 812533 1 T A scaffold2580 Both SNP 0039.scaffold00152 812612 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 812644 1 A T scaffold2580 Both SNP 0039.scaffold00152 812711 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 812742 14 AACTATTTACTATT .............. scaffold2580 ScafM SNP 0039.scaffold00152 812775 1 A T scaffold2580 Both INDEL 0039.scaffold00152 812848 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 812853 1 A G scaffold2580 Both SNP 0039.scaffold00152 812861 1 C T scaffold2580 Both SNP 0039.scaffold00152 812937 1 A G scaffold2580 Both SNP 0039.scaffold00152 812968 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 813009 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 813012 7 ....... GGATTCA scaffold2580 Both SNP 0039.scaffold00152 813047 1 T G scaffold2580 Both SNP 0039.scaffold00152 813053 1 A T scaffold2580 Both SNP 0039.scaffold00152 813059 1 C G scaffold2580 Both SNP 0039.scaffold00152 813167 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 813266 1 T C scaffold2580 Both SNP 0039.scaffold00152 813320 1 T C scaffold2580 Both SNP 0039.scaffold00152 813361 1 G A scaffold2580 ReadM SNP 0039.scaffold00152 813492 1 C T - ReadM SNP 0039.scaffold00152 813565 1 C T - ReadM SNP 0039.scaffold00152 813604 1 G A - ScafM SNP 0039.scaffold00152 817326 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 817329 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 817334 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817342 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 817348 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 817350 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 817354 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 817358 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 817385 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 817398 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 817818 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 817821 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 817834 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817844 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 817850 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 817853 2 TC CT scaffold2580 ScafM SNP 0039.scaffold00152 817860 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817869 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 817888 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817896 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817898 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 817902 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 817906 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 817937 3 CCA ... scaffold2580 ScafM SNP 0039.scaffold00152 817949 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 817964 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 817993 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 818580 1 G C scaffold2580 ScafM INDEL 0039.scaffold00152 818602 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 818643 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 818670 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 818671 1 . C scaffold2580 ScafM SNP 0039.scaffold00152 818675 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 818806 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 818816 6 TCAGGC ...... scaffold2580 ScafM SNP 0039.scaffold00152 818836 2 CT GG scaffold2580 ScafM INDEL 0039.scaffold00152 818842 3 CTT ... scaffold2580 ScafM SNP 0039.scaffold00152 818871 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 818876 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 818917 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 818936 13 CCCTGATTCGGGC ............. scaffold2580 ScafM INDEL 0039.scaffold00152 818999 7 ACTCCAA ....... scaffold2580 ScafM SNP 0039.scaffold00152 819037 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 819039 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 819045 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 819058 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 819103 1 G . scaffold2580 ScafM INDEL 0039.scaffold00152 819105 2 TC .. scaffold2580 ScafM INDEL 0039.scaffold00152 819108 2 GG .. scaffold2580 ScafM INDEL 0039.scaffold00152 819113 3 AAT ... scaffold2580 ScafM SNP 0039.scaffold00152 819139 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 819147 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 819607 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819623 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 819645 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819662 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 819667 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 819676 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 819693 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 819712 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 819718 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 819756 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819844 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819864 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819872 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 819875 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 819888 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819893 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 819909 1 C . scaffold2580 ScafM SNP 0039.scaffold00152 819931 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 819960 1 C . scaffold2580 ScafM SNP 0039.scaffold00152 819980 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 819982 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 819985 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 819988 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 819996 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 820022 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 820033 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 820053 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 820072 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 820143 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 820154 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 820156 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 820187 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 820189 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 820190 5 ..... GCCGG scaffold2580 ScafM SNP 0039.scaffold00152 820218 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 820230 1 C T scaffold2580 Both SNP 0039.scaffold00152 820314 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 820395 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 820398 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 820417 4 TAAA .... scaffold2580 Both SNP 0039.scaffold00152 820434 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 820549 1 G A scaffold2580 Both SNP 0039.scaffold00152 820620 1 A G scaffold2580 Both SNP 0039.scaffold00152 820752 1 G T scaffold2580 Both SNP 0039.scaffold00152 820755 1 G C scaffold2580 Both SNP 0039.scaffold00152 820872 1 G A scaffold2580 Both SNP 0039.scaffold00152 820891 1 G A scaffold2580 Both SNP 0039.scaffold00152 820968 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 821026 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 821034 1 A T scaffold2580 ScafM INDEL 0039.scaffold00152 821080 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 821087 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 821185 1 C . scaffold2580 ScafM INDEL 0039.scaffold00152 821207 7 ....... TAAACGA scaffold2580 ScafM SNP 0039.scaffold00152 821298 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 821340 1 T G - ReadM SNP 0039.scaffold00152 821383 1 T A - ReadM SNP 0039.scaffold00152 821408 1 G A - ScafM INDEL 0039.scaffold00152 821470 4 .... ATAA scaffold2580 Both SNP 0039.scaffold00152 821638 1 G A scaffold2580 Both SNP 0039.scaffold00152 821671 1 G C scaffold2580 Both SNP 0039.scaffold00152 821680 1 T A scaffold2580 ScafM INDEL 0039.scaffold00152 821776 1 . T scaffold2580 ScafM SNP 0039.scaffold00152 821953 1 C T scaffold2580 Both SNP 0039.scaffold00152 822906 1 T C scaffold2580 Both SNP 0039.scaffold00152 823103 1 C T scaffold2580 Both INDEL 0039.scaffold00152 823290 1 A . scaffold2580 Both SNP 0039.scaffold00152 823626 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 823976 1 . C scaffold2580 Both SNP 0039.scaffold00152 824766 1 A G scaffold2580 Both SNP 0039.scaffold00152 824803 1 A C scaffold2580 ReadM SNP 0039.scaffold00152 825888 1 T C - ReadM SNP 0039.scaffold00152 825901 1 T C - ReadM INDEL 0039.scaffold00152 826089 1 . T - Both INDEL 0039.scaffold00152 826422 1 . A scaffold2580 ScafM INDEL 0039.scaffold00152 826565 2 .. AA scaffold2580 ScafM SNP 0039.scaffold00152 826922 2 CG GC scaffold2580 Both SNP 0039.scaffold00152 826935 1 T G scaffold2580 ScafM INDEL 0039.scaffold00152 827210 9 TACATTTTG ......... scaffold2580 ScafM SNP 0039.scaffold00152 827233 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 827250 1 G A scaffold2580 Both SNP 0039.scaffold00152 827255 1 C G scaffold2580 Both SNP 0039.scaffold00152 827300 1 G C scaffold2580 Both SNP 0039.scaffold00152 827350 1 A G scaffold2580 Both SNP 0039.scaffold00152 827353 1 G T scaffold2580 Both SNP 0039.scaffold00152 827400 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 827439 1 A . scaffold2580 ScafM INDEL 0039.scaffold00152 827466 3 ... TCG scaffold2580 ScafM INDEL 0039.scaffold00152 827467 1 . G scaffold2580 ScafM SNP 0039.scaffold00152 827475 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 827515 1 G C scaffold2580 ScafM INDEL 0039.scaffold00152 827534 2 .. AT scaffold2580 ScafM SNP 0039.scaffold00152 827539 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 827554 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 827608 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 827610 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 827634 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 827974 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 827980 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 827985 2 TT CC scaffold2580 ScafM SNP 0039.scaffold00152 829211 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 829247 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 829259 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 829301 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 829307 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 829333 1 C T scaffold2580 ScafM INDEL 0039.scaffold00152 829348 3 ... CTC scaffold2580 ScafM SNP 0039.scaffold00152 829365 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 829390 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 829411 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 829430 1 C G scaffold2580 ScafM SNP 0039.scaffold00152 829432 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 829453 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 829455 2 AT TG scaffold2580 Both SNP 0039.scaffold00152 829590 1 G A scaffold2580 Both SNP 0039.scaffold00152 829684 1 T G scaffold2580 Both SNP 0039.scaffold00152 829705 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 829783 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 829791 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 829795 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 829803 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 829805 1 G T scaffold2580 ScafM SNP 0039.scaffold00152 829841 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 829854 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 829859 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 829872 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 829896 1 T C scaffold2580 Both SNP 0039.scaffold00152 829935 1 G T scaffold2580 Both SNP 0039.scaffold00152 829941 1 A G scaffold2580 Both SNP 0039.scaffold00152 830001 1 A G scaffold2580 ScafM INDEL 0039.scaffold00152 830021 7 TAATTTT ....... scaffold2580 ScafM SNP 0039.scaffold00152 830030 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 830043 3 ... AAT scaffold2580 ScafM INDEL 0039.scaffold00152 830051 2 TC .. scaffold2580 ScafM SNP 0039.scaffold00152 830054 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 830059 1 T A scaffold2580 Both SNP 0039.scaffold00152 830093 1 C T scaffold2580 Both SNP 0039.scaffold00152 830207 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 830216 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 830230 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 830232 1 T G scaffold2580 Both SNP 0039.scaffold00152 830299 1 G A scaffold2580 Both SNP 0039.scaffold00152 830305 1 A G scaffold2580 Both SNP 0039.scaffold00152 830331 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 830352 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 830360 1 T G scaffold2580 Both SNP 0039.scaffold00152 830376 1 G A scaffold2580 Both SNP 0039.scaffold00152 830506 1 C T scaffold2580 Both SNP 0039.scaffold00152 830562 1 A G scaffold2580 Both SNP 0039.scaffold00152 830657 1 C T scaffold2580 Both SNP 0039.scaffold00152 830670 1 A C scaffold2580 ScafM SNP 0039.scaffold00152 830764 1 T C scaffold2580 Both INDEL 0039.scaffold00152 830806 1 . A scaffold2580 Both SNP 0039.scaffold00152 830901 1 G C scaffold2580 ScafM SNP 0039.scaffold00152 830935 1 T C scaffold2580 Both SNP 0039.scaffold00152 830946 1 G A scaffold2580 Both SNP 0039.scaffold00152 830964 1 T C scaffold2580 Both SNP 0039.scaffold00152 830973 1 T C scaffold2580 Both SNP 0039.scaffold00152 831081 1 C T scaffold2580 Both SNP 0039.scaffold00152 831104 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 831116 1 G T scaffold2580 Both SNP 0039.scaffold00152 831242 1 C T scaffold2580 Both SNP 0039.scaffold00152 831298 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 831310 1 G A scaffold2580 ScafM INDEL 0039.scaffold00152 831325 1 A . scaffold2580 ScafM SNP 0039.scaffold00152 831333 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 831351 1 G T scaffold2580 ScafM INDEL 0039.scaffold00152 831366 10 GCAAGCCATC .......... scaffold2580 ScafM SNP 0039.scaffold00152 831378 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 831400 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 831416 1 A G scaffold2580 Both SNP 0039.scaffold00152 831425 1 T A scaffold2580 Both SNP 0039.scaffold00152 831482 1 G A scaffold2580 Both SNP 0039.scaffold00152 831505 1 T C scaffold2580 Both SNP 0039.scaffold00152 831558 1 T A scaffold2580 Both SNP 0039.scaffold00152 831629 1 T C scaffold2580 ScafM INDEL 0039.scaffold00152 831646 2 CT .. scaffold2580 ScafM SNP 0039.scaffold00152 831665 1 T C scaffold2580 Both SNP 0039.scaffold00152 831688 1 G T scaffold2580 Both SNP 0039.scaffold00152 831829 1 G A scaffold2580 Both SNP 0039.scaffold00152 832006 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 832048 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 832051 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 832061 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 832073 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 832085 1 A C scaffold2580 ScafM INDEL 0039.scaffold00152 832087 5 ..... TAGTT scaffold2580 ScafM INDEL 0039.scaffold00152 832091 5 ..... AGATA scaffold2580 ScafM INDEL 0039.scaffold00152 832092 1 . A scaffold2580 ScafM INDEL 0039.scaffold00152 832093 4 .... AGGC scaffold2580 ScafM INDEL 0039.scaffold00152 832096 7 ....... ACTTGCC scaffold2580 ScafM INDEL 0039.scaffold00152 832098 3 ... TTG scaffold2580 ScafM SNP 0039.scaffold00152 832112 1 T C scaffold2580 Both SNP 0039.scaffold00152 832319 1 A T scaffold2580 ScafM SNP 0039.scaffold00152 832349 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 832354 1 C A scaffold2580 ScafM SNP 0039.scaffold00152 832357 2 GA CT scaffold2580 Both SNP 0039.scaffold00152 832406 1 C G scaffold2580 Both SNP 0039.scaffold00152 832472 1 C T scaffold2580 Both SNP 0039.scaffold00152 832474 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 832576 1 T C scaffold2580 ScafM SNP 0039.scaffold00152 832596 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 832600 2 CC TT scaffold2580 ScafM INDEL 0039.scaffold00152 832631 2 .T AA scaffold2580 ScafM SNP 0039.scaffold00152 832655 1 A G scaffold2580 ScafM SNP 0039.scaffold00152 832658 1 T A scaffold2580 ScafM SNP 0039.scaffold00152 832663 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 832676 2 TT CC scaffold2580 ScafM SNP 0039.scaffold00152 832688 1 C T scaffold2580 ScafM SNP 0039.scaffold00152 832708 1 G A scaffold2580 ScafM SNP 0039.scaffold00152 832734 1 T G scaffold2580 ScafM SNP 0039.scaffold00152 832750 1 C A scaffold2580 Both SNP 0039.scaffold00152 832785 1 A G scaffold2580 Both SNP 0039.scaffold00152 832853 1 G C scaffold2580 Both SNP 0039.scaffold00152 832872 1 G A scaffold2580 Both SNP 0039.scaffold00152 832993 1 C T scaffold2580 Both SNP 0039.scaffold00152 833455 1 C A scaffold2580 Both SNP 0039.scaffold00152 833458 1 C T scaffold2580 Both SNP 0039.scaffold00152 834278 1 A T scaffold2580 Both INDEL 0039.scaffold00152 834317 1 . A scaffold2580 Both SNP 0039.scaffold00152 834343 1 A C scaffold2580 Both SNP 0039.scaffold00152 834417 1 C G scaffold2580 Both SNP 0039.scaffold00152 834906 1 T C scaffold2580 ReadM SNP 0039.scaffold00152 836286 1 G A - ReadM SNP 0039.scaffold00152 836354 1 A C - ReadM SNP 0039.scaffold00152 836566 1 T G - ReadM SNP 0039.scaffold00152 836673 1 C T - ReadM SNP 0039.scaffold00152 836747 1 T C - ReadM INDEL 0039.scaffold00152 836842 1 T . - ReadM SNP 0039.scaffold00152 837035 1 T C - ReadM INDEL 0039.scaffold00152 837480 1 . C - ScafM INDEL 0039.scaffold00152 837788 4 CGAA .... scaffold688 Both INDEL 0039.scaffold00152 837817 2 AA .. scaffold688 ReadM SNP 0039.scaffold00152 838261 1 A C - ReadM SNP 0039.scaffold00152 838291 1 A C - ReadM SNP 0039.scaffold00152 838421 1 C A - ReadM SNP 0039.scaffold00152 838495 1 C A - ScafM SNP 0039.scaffold00152 838695 1 A G scaffold688 Both SNP 0039.scaffold00152 838821 1 A C scaffold688 ReadM SNP 0039.scaffold00152 838852 1 A G - ReadM INDEL 0039.scaffold00152 838875 1 T . - ReadM SNP 0039.scaffold00152 839065 1 A T - ReadM SNP 0039.scaffold00152 839091 1 C T - ReadM INDEL 0039.scaffold00152 839248 2 .. AG - ReadM SNP 0039.scaffold00152 839275 1 T C - ReadM SNP 0039.scaffold00152 839281 1 A G - Both SNP 0039.scaffold00152 839383 1 C T scaffold688 Both SNP 0039.scaffold00152 839411 1 G A scaffold688 Both SNP 0039.scaffold00152 839670 1 A T scaffold688 ReadM SNP 0039.scaffold00152 839804 1 C G - ReadM INDEL 0039.scaffold00152 839806 1 C . - ReadM SNP 0039.scaffold00152 839947 1 A G - ReadM SNP 0039.scaffold00152 840128 1 G C - ReadM SNP 0039.scaffold00152 840230 1 A G - Both SNP 0039.scaffold00152 840480 1 T C scaffold688 ScafM INDEL 0039.scaffold00152 840558 3 ATA ... scaffold688 Both SNP 0039.scaffold00152 840593 1 A G scaffold688 ReadM INDEL 0039.scaffold00152 840709 1 . T - ReadM SNP 0039.scaffold00152 840748 1 G A - Both SNP 0039.scaffold00152 840820 1 C T scaffold688 Both SNP 0039.scaffold00152 840883 1 T C scaffold688 ScafM INDEL 0039.scaffold00152 841265 5 ATTTT ..... scaffold688 ScafM SNP 0039.scaffold00152 841365 1 G A scaffold688 ScafM SNP 0039.scaffold00152 841486 1 T A scaffold688 Both SNP 0039.scaffold00152 842152 1 A T scaffold688 ScafM INDEL 0039.scaffold00152 842289 5 ..... GCATT scaffold688 ScafM INDEL 0039.scaffold00152 842328 2 .C TT scaffold688 ScafM INDEL 0039.scaffold00152 842338 1 . C scaffold688 ScafM SNP 0039.scaffold00152 842359 1 A G scaffold688 ScafM SNP 0039.scaffold00152 842420 1 T C scaffold688 ScafM SNP 0039.scaffold00152 842472 1 A T scaffold688 Both SNP 0039.scaffold00152 842594 1 C T scaffold688 Both SNP 0039.scaffold00152 842642 1 T C scaffold688 Both SNP 0039.scaffold00152 842736 1 G A scaffold688 Both SNP 0039.scaffold00152 842800 1 C T scaffold688 Both SNP 0039.scaffold00152 842954 1 T C scaffold688 Both SNP 0039.scaffold00152 842987 1 C T scaffold688 Both SNP 0039.scaffold00152 843024 1 G A scaffold688 Both SNP 0039.scaffold00152 843035 1 T G scaffold688 ScafM SNP 0039.scaffold00152 843079 1 C T scaffold688 ScafM SNP 0039.scaffold00152 843092 1 C A scaffold688 ScafM SNP 0039.scaffold00152 843100 1 C T scaffold688 ScafM SNP 0039.scaffold00152 843139 1 T C scaffold688 ScafM SNP 0039.scaffold00152 843144 1 G C scaffold688 Both SNP 0039.scaffold00152 843200 1 C A scaffold688 Both SNP 0039.scaffold00152 843220 1 G T scaffold688 Both SNP 0039.scaffold00152 843228 1 G A scaffold688 ScafM INDEL 0039.scaffold00152 843271 5 GCCTG ..... scaffold688 ScafM INDEL 0039.scaffold00152 843306 1 A . scaffold688 ScafM SNP 0039.scaffold00152 843323 1 C T scaffold688 ScafM SNP 0039.scaffold00152 843355 1 A T scaffold688 ScafM INDEL 0039.scaffold00152 843397 8 ACTATGCA ........ scaffold688 ScafM SNP 0039.scaffold00152 843422 1 C A scaffold688 ScafM SNP 0039.scaffold00152 843464 1 C T scaffold688 ScafM SNP 0039.scaffold00152 843468 1 A T scaffold688 ScafM INDEL 0039.scaffold00152 843519 1 A . scaffold688 ScafM SNP 0039.scaffold00152 843548 1 C T scaffold688 ScafM INDEL 0039.scaffold00152 843550 3 ... ATT scaffold688 ScafM SNP 0039.scaffold00152 843579 1 G T scaffold688 ScafM INDEL 0039.scaffold00152 843584 5 ..... AGATT scaffold688 ScafM INDEL 0039.scaffold00152 843586 16 ................ TTAGACTAGTCCTACA scaffold688 ScafM SNP 0039.scaffold00152 843610 1 C T scaffold688 ScafM SNP 0039.scaffold00152 843628 1 T G scaffold688 ScafM SNP 0039.scaffold00152 843631 1 T C scaffold688 ReadM SNP 0039.scaffold00152 843789 1 T C - ScafM SNP 0039.scaffold00152 843862 1 T G scaffold688 ScafM SNP 0039.scaffold00152 843864 1 G C scaffold688 Both SNP 0039.scaffold00152 843878 1 G T scaffold688 Both SNP 0039.scaffold00152 843981 1 A G scaffold688 ReadM SNP 0039.scaffold00152 844037 1 G T - Both SNP 0039.scaffold00152 844161 1 A G scaffold688 ScafM SNP 0039.scaffold00152 844225 1 T A scaffold688 ReadM SNP 0039.scaffold00152 844372 1 A G - ReadM SNP 0039.scaffold00152 844454 1 G A - Both INDEL 0039.scaffold00152 844514 2 .. AT scaffold688 Both SNP 0039.scaffold00152 844538 1 T C scaffold688 ReadM SNP 0039.scaffold00152 844739 1 C T - ScafM SNP 0039.scaffold00152 845185 1 G C scaffold688 ScafM INDEL 0039.scaffold00152 845362 3 ATC ... scaffold688 ScafM SNP 0039.scaffold00152 845462 1 T A scaffold688 ScafM SNP 0039.scaffold00152 845464 2 GT CA scaffold688 ScafM SNP 0039.scaffold00152 845467 1 A G scaffold688 ScafM SNP 0039.scaffold00152 845529 1 A G scaffold688 Both SNP 0039.scaffold00152 845558 1 G A scaffold688 ReadM SNP 0039.scaffold00152 845686 1 T C - ReadM SNP 0039.scaffold00152 845955 1 A T - Both INDEL 0039.scaffold00152 847828 1 T . scaffold688 ScafM INDEL 0039.scaffold00152 848048 1 . T scaffold688 ScafM INDEL 0039.scaffold00152 848117 1 T . scaffold688 ReadM INDEL 0039.scaffold00152 848761 1 . T - Both SNP 0039.scaffold00152 848823 1 T A scaffold688 Both SNP 0039.scaffold00152 849774 1 A G scaffold688 ScafM INDEL 0039.scaffold00152 849832 9 GATAAGAAA ......... scaffold688 ScafM SNP 0039.scaffold00152 849886 2 AC GG scaffold688 ScafM SNP 0039.scaffold00152 849902 1 G A scaffold688 Both SNP 0039.scaffold00152 849938 1 G A scaffold688 Both SNP 0039.scaffold00152 850058 1 A C scaffold688 ScafM SNP 0039.scaffold00152 850111 2 TT AG scaffold688 Both SNP 0039.scaffold00152 850141 1 T C scaffold688 ScafM SNP 0039.scaffold00152 850264 1 G A scaffold688 ScafM INDEL 0039.scaffold00152 850274 10 .......... TTTTGAATAC scaffold688 ScafM SNP 0039.scaffold00152 850287 1 A C scaffold688 ScafM INDEL 0039.scaffold00152 850309 3 ... TAA scaffold688 ScafM SNP 0039.scaffold00152 850321 1 T G scaffold688 ScafM SNP 0039.scaffold00152 850360 1 T C scaffold688 ScafM SNP 0039.scaffold00152 850403 1 A G scaffold688 ScafM SNP 0039.scaffold00152 850413 1 A G scaffold688 ScafM SNP 0039.scaffold00152 850618 1 A T scaffold688 ScafM SNP 0039.scaffold00152 850632 1 G T scaffold688 ScafM INDEL 0039.scaffold00152 850690 1 T . scaffold688 ScafM SNP 0039.scaffold00152 850703 1 A C scaffold688 ScafM SNP 0039.scaffold00152 850716 1 A G scaffold688 ScafM INDEL 0039.scaffold00152 850717 1 . A scaffold688 ScafM SNP 0039.scaffold00152 850754 1 A G scaffold688 ScafM SNP 0039.scaffold00152 850768 1 G A scaffold688 ScafM SNP 0039.scaffold00152 850773 1 A G scaffold688 ScafM SNP 0039.scaffold00152 850809 2 CA AC scaffold688 ScafM SNP 0039.scaffold00152 850848 1 G T scaffold688 ScafM SNP 0039.scaffold00152 850888 1 C T scaffold688 ScafM SNP 0039.scaffold00152 852203 1 A C scaffold4676 ScafM INDEL 0039.scaffold00152 852217 2 .A GT scaffold4676 ScafM SNP 0039.scaffold00152 852245 1 A G scaffold4676 ScafM SNP 0039.scaffold00152 852275 1 T C scaffold4676 ScafM INDEL 0039.scaffold00152 855433 3 ... ATG scaffold8134 ScafM INDEL 0039.scaffold00152 855464 16 ................ TTGGAGATAAGTAAAC scaffold8134 ScafM INDEL 0039.scaffold00152 855465 3 ... TTG scaffold8134 ScafM SNP 0039.scaffold00152 855482 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 855505 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 855524 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 855529 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 855547 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 855559 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 855603 4 .... ATTA scaffold8134 ScafM INDEL 0039.scaffold00152 855604 1 . C scaffold8134 ScafM SNP 0039.scaffold00152 855652 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 855661 1 A C scaffold8134 Both SNP 0039.scaffold00152 855705 1 A C scaffold8134 Both INDEL 0039.scaffold00152 855719 1 C . scaffold8134 Both SNP 0039.scaffold00152 855736 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 855866 3 TCA ... scaffold8134 ScafM SNP 0039.scaffold00152 855890 1 T A scaffold8134 ScafM INDEL 0039.scaffold00152 855918 3 ... AAT scaffold8134 Both SNP 0039.scaffold00152 855957 1 T C scaffold8134 Both SNP 0039.scaffold00152 856220 1 G T scaffold8134 Both SNP 0039.scaffold00152 856284 1 C T scaffold8134 Both SNP 0039.scaffold00152 856338 1 T A scaffold8134 Both SNP 0039.scaffold00152 856356 1 G A scaffold8134 Both SNP 0039.scaffold00152 856359 1 A T scaffold8134 Both SNP 0039.scaffold00152 856476 1 G A scaffold8134 Both SNP 0039.scaffold00152 856497 1 T C scaffold8134 Both SNP 0039.scaffold00152 856517 1 G T scaffold8134 Both SNP 0039.scaffold00152 856548 1 A T scaffold8134 Both SNP 0039.scaffold00152 856735 1 T G scaffold8134 ScafM INDEL 0039.scaffold00152 856886 1 . T scaffold8134 Both SNP 0039.scaffold00152 856903 1 T A scaffold8134 Both SNP 0039.scaffold00152 856995 1 C T scaffold8134 Both SNP 0039.scaffold00152 857039 1 C T scaffold8134 Both SNP 0039.scaffold00152 857117 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 857373 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 857398 2 TA GG scaffold8134 ScafM SNP 0039.scaffold00152 857465 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 857470 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 857485 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 857758 1 T A scaffold3387 ScafM INDEL 0039.scaffold00152 857765 3 ... AGT scaffold3387 ScafM INDEL 0039.scaffold00152 857776 1 A . scaffold3387 ScafM INDEL 0039.scaffold00152 857784 5 GAAAC ..... scaffold3387 ScafM SNP 0039.scaffold00152 857854 1 A T scaffold3387 ScafM INDEL 0039.scaffold00152 857861 42 GTCTAAATGAAAGAAAGTTAGGTCTAAATGAAAGAAACTTAG .......................................... scaffold3387 ScafM SNP 0039.scaffold00152 857930 1 A C scaffold3387 ScafM SNP 0039.scaffold00152 857937 1 A T scaffold3387 Both SNP 0039.scaffold00152 857961 1 G C scaffold3387 ScafM SNP 0039.scaffold00152 858042 1 C T scaffold3387 ScafM SNP 0039.scaffold00152 858066 1 A G scaffold3387 ScafM SNP 0039.scaffold00152 858092 1 T C scaffold3387 ScafM SNP 0039.scaffold00152 858119 1 T G scaffold3387 ScafM SNP 0039.scaffold00152 858169 1 C T scaffold3387 ScafM INDEL 0039.scaffold00152 858191 2 TT .. scaffold3387 ScafM SNP 0039.scaffold00152 858237 1 C T scaffold3387 ScafM INDEL 0039.scaffold00152 858247 1 . A scaffold3387 ScafM SNP 0039.scaffold00152 858257 1 T C scaffold3387 ScafM SNP 0039.scaffold00152 858274 2 TT CG scaffold3387 ScafM SNP 0039.scaffold00152 858317 1 G A scaffold3387 ScafM INDEL 0039.scaffold00152 858390 2 .. TA scaffold3387 ScafM SNP 0039.scaffold00152 858445 1 G T scaffold3387 ScafM SNP 0039.scaffold00152 858454 1 T C scaffold3387 ScafM SNP 0039.scaffold00152 858477 1 C A scaffold3387 ScafM SNP 0039.scaffold00152 858780 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 858808 2 AA GG scaffold8134 ScafM SNP 0039.scaffold00152 859091 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 859124 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 860051 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 860088 1 C A scaffold8134 ScafM SNP 0039.scaffold00152 860105 1 C G scaffold8134 Both SNP 0039.scaffold00152 860119 1 A G scaffold8134 Both SNP 0039.scaffold00152 860802 1 C A scaffold8134 Both SNP 0039.scaffold00152 860840 1 G A scaffold8134 Both SNP 0039.scaffold00152 860895 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 860944 2 .. AT scaffold8134 ScafM SNP 0039.scaffold00152 860955 1 T A scaffold8134 Both INDEL 0039.scaffold00152 860987 1 A . scaffold8134 Both SNP 0039.scaffold00152 861134 1 G A scaffold8134 Both SNP 0039.scaffold00152 861157 1 C T scaffold8134 Both SNP 0039.scaffold00152 861513 1 T C scaffold8134 ReadM SNP 0039.scaffold00152 861716 1 A C - ReadM SNP 0039.scaffold00152 861765 1 C A - ReadM SNP 0039.scaffold00152 861787 1 C A - Both SNP 0039.scaffold00152 862252 1 G T scaffold8134 Both SNP 0039.scaffold00152 862443 1 T A scaffold8134 Both SNP 0039.scaffold00152 862473 1 A G scaffold8134 Both SNP 0039.scaffold00152 862501 1 A T scaffold8134 Both SNP 0039.scaffold00152 862775 1 A C scaffold8134 ScafM INDEL 0039.scaffold00152 862876 1 C . scaffold8134 ScafM INDEL 0039.scaffold00152 862885 3 AAA ... scaffold8134 ReadM SNP 0039.scaffold00152 863038 1 T A - Both SNP 0039.scaffold00152 863187 1 C T scaffold8134 Both INDEL 0039.scaffold00152 863221 1 T . scaffold8134 Both SNP 0039.scaffold00152 863248 1 C A scaffold8134 Both SNP 0039.scaffold00152 863274 1 A G scaffold8134 Both INDEL 0039.scaffold00152 863564 1 . T scaffold8134 Both SNP 0039.scaffold00152 863768 1 C G scaffold8134 ScafM SNP 0039.scaffold00152 864369 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 864374 7 TCCCTAG ....... scaffold8134 Both SNP 0039.scaffold00152 864645 1 C A scaffold8134 Both SNP 0039.scaffold00152 864789 1 C A scaffold8134 Both SNP 0039.scaffold00152 866078 1 C A scaffold8134 Both SNP 0039.scaffold00152 866439 1 C A scaffold8134 ReadM SNP 0039.scaffold00152 867562 1 C A - Both SNP 0039.scaffold00152 867707 1 A T scaffold8134 Both SNP 0039.scaffold00152 867827 1 T G scaffold8134 Both INDEL 0039.scaffold00152 867843 1 . G scaffold8134 ReadM SNP 0039.scaffold00152 868149 1 G A - ScafM SNP 0039.scaffold00152 868495 1 A G scaffold8134 Both SNP 0039.scaffold00152 868623 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 868657 1 T C scaffold8134 Both SNP 0039.scaffold00152 868868 1 A T scaffold8134 Both SNP 0039.scaffold00152 869503 1 G A scaffold8134 Both SNP 0039.scaffold00152 869906 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 870132 26 .......................... ATGGCTGGATATCCACGCTTATGCCC scaffold8134 ReadM SNP 0039.scaffold00152 870133 1 C A - ScafM INDEL 0039.scaffold00152 870133 7 ....... AGTAAAA scaffold8134 Both SNP 0039.scaffold00152 870315 1 G A scaffold8134 Both SNP 0039.scaffold00152 870487 1 T A scaffold8134 Both SNP 0039.scaffold00152 870659 1 G A scaffold8134 Both SNP 0039.scaffold00152 871428 1 C G scaffold8134 Both SNP 0039.scaffold00152 871687 1 T G scaffold8134 Both SNP 0039.scaffold00152 871766 1 T G scaffold8134 Both SNP 0039.scaffold00152 872095 1 A G scaffold8134 Both SNP 0039.scaffold00152 872132 1 C G scaffold8134 ReadM SNP 0039.scaffold00152 872481 1 A G - ScafM INDEL 0039.scaffold00152 873263 4 .... TATA scaffold8134 ScafM SNP 0039.scaffold00152 873303 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 873498 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 873561 1 A . scaffold8134 Both SNP 0039.scaffold00152 873955 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 873981 2 .. CC scaffold8134 ScafM INDEL 0039.scaffold00152 873989 1 . A scaffold8134 Both SNP 0039.scaffold00152 874099 1 C T scaffold8134 Both SNP 0039.scaffold00152 874163 1 T C scaffold8134 Both SNP 0039.scaffold00152 874322 1 C T scaffold8134 Both SNP 0039.scaffold00152 874433 1 G A scaffold8134 Both SNP 0039.scaffold00152 874536 1 G T scaffold8134 Both SNP 0039.scaffold00152 874549 1 C A scaffold8134 Both SNP 0039.scaffold00152 874647 1 A T scaffold8134 Both SNP 0039.scaffold00152 874668 1 G C scaffold8134 Both SNP 0039.scaffold00152 874686 1 G C scaffold8134 Both SNP 0039.scaffold00152 874720 1 G A scaffold8134 Both INDEL 0039.scaffold00152 874924 2 TG .. scaffold8134 ReadM SNP 0039.scaffold00152 875015 1 C T - ReadM SNP 0039.scaffold00152 875072 1 T C - Both SNP 0039.scaffold00152 875954 1 A G scaffold8134 Both SNP 0039.scaffold00152 877039 1 T C scaffold8134 Both SNP 0039.scaffold00152 877514 1 C T scaffold8134 Both SNP 0039.scaffold00152 877943 1 A T scaffold8134 Both SNP 0039.scaffold00152 878024 1 C A scaffold8134 Both SNP 0039.scaffold00152 878118 1 T C scaffold8134 Both INDEL 0039.scaffold00152 878501 3 ... TAA scaffold8134 Both SNP 0039.scaffold00152 878549 1 G A scaffold8134 Both SNP 0039.scaffold00152 878616 1 A T scaffold8134 Both SNP 0039.scaffold00152 878624 1 G T scaffold8134 Both INDEL 0039.scaffold00152 878745 2 AA .. scaffold8134 Both SNP 0039.scaffold00152 878806 1 A G scaffold8134 Both INDEL 0039.scaffold00152 878823 1 . T scaffold8134 Both SNP 0039.scaffold00152 878894 1 G A scaffold8134 Both SNP 0039.scaffold00152 878925 1 A G scaffold8134 Both SNP 0039.scaffold00152 878937 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 879008 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 879016 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 879038 7 ....... GTCTGTA scaffold8134 ScafM SNP 0039.scaffold00152 879055 1 T G scaffold8134 ScafM INDEL 0039.scaffold00152 879058 1 . A scaffold8134 ScafM SNP 0039.scaffold00152 879071 1 G C scaffold8134 ReadM SNP 0039.scaffold00152 879402 1 C T - ReadM SNP 0039.scaffold00152 879417 1 T C - ReadM SNP 0039.scaffold00152 879465 1 A C - ReadM SNP 0039.scaffold00152 879512 1 A G - ScafM SNP 0039.scaffold00152 882082 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 882088 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 882098 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 882125 2 AA GT scaffold8134 ScafM INDEL 0039.scaffold00152 882150 1 . A scaffold8134 ScafM INDEL 0039.scaffold00152 882170 1 G . scaffold8134 ScafM SNP 0039.scaffold00152 882172 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 882196 1 G C scaffold8134 ScafM SNP 0039.scaffold00152 882223 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 882238 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 882251 1 G C scaffold8134 ScafM SNP 0039.scaffold00152 882261 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 882281 1 T . scaffold8134 ScafM SNP 0039.scaffold00152 882283 1 G C scaffold8134 ScafM SNP 0039.scaffold00152 882302 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 882316 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 882351 1 A G scaffold8134 ReadM SNP 0039.scaffold00152 883179 1 G A - ReadM SNP 0039.scaffold00152 883183 1 G T - ReadM SNP 0039.scaffold00152 883222 1 C A - ReadM SNP 0039.scaffold00152 883249 1 C T - ReadM SNP 0039.scaffold00152 883336 1 C A - ReadM SNP 0039.scaffold00152 883414 1 T C - ReadM SNP 0039.scaffold00152 883421 1 A C - ReadM SNP 0039.scaffold00152 883443 1 A T - ReadM SNP 0039.scaffold00152 883530 1 C T - ReadM SNP 0039.scaffold00152 883532 1 A G - ReadM SNP 0039.scaffold00152 883672 1 T A - ReadM SNP 0039.scaffold00152 883701 1 T A - ReadM SNP 0039.scaffold00152 883776 1 A G - ReadM SNP 0039.scaffold00152 883788 1 A G - ReadM SNP 0039.scaffold00152 883800 1 A G - ReadM SNP 0039.scaffold00152 883855 1 G A - ReadM SNP 0039.scaffold00152 883857 1 G A - ReadM SNP 0039.scaffold00152 883891 1 C T - ReadM SNP 0039.scaffold00152 883992 1 T A - ReadM SNP 0039.scaffold00152 884012 1 T C - ReadM SNP 0039.scaffold00152 884120 1 C T - ReadM SNP 0039.scaffold00152 884134 1 C A - ReadM SNP 0039.scaffold00152 884199 1 G A - ReadM SNP 0039.scaffold00152 884217 1 G T - ReadM SNP 0039.scaffold00152 884235 1 T C - ReadM SNP 0039.scaffold00152 884284 1 T G - ReadM INDEL 0039.scaffold00152 884293 1 . A - ReadM SNP 0039.scaffold00152 884341 1 G A - ReadM SNP 0039.scaffold00152 884354 1 C T - ReadM SNP 0039.scaffold00152 884405 1 A G - ReadM SNP 0039.scaffold00152 884509 1 T A - ReadM SNP 0039.scaffold00152 884516 1 C T - ReadM SNP 0039.scaffold00152 884568 1 G A - ReadM SNP 0039.scaffold00152 884580 1 A G - ReadM SNP 0039.scaffold00152 884592 1 G T - ReadM SNP 0039.scaffold00152 884684 1 T C - ReadM SNP 0039.scaffold00152 884818 1 T G - ReadM SNP 0039.scaffold00152 884837 1 A C - ReadM SNP 0039.scaffold00152 884864 1 A G - ReadM SNP 0039.scaffold00152 884887 1 G A - ReadM SNP 0039.scaffold00152 884949 1 G A - ReadM SNP 0039.scaffold00152 884975 1 A G - ReadM SNP 0039.scaffold00152 884979 1 G T - ReadM SNP 0039.scaffold00152 885093 1 G A - ReadM SNP 0039.scaffold00152 885273 1 T A - ReadM SNP 0039.scaffold00152 885328 1 T C - ReadM SNP 0039.scaffold00152 885342 1 T C - ScafM SNP 0039.scaffold00152 885795 1 T C scaffold13499 ScafM SNP 0039.scaffold00152 885912 1 C T scaffold13499 ScafM INDEL 0039.scaffold00152 885914 3 ... GAA scaffold13499 Both SNP 0039.scaffold00152 886133 1 C G scaffold13499 Both SNP 0039.scaffold00152 886192 1 T G scaffold13499 Both SNP 0039.scaffold00152 886267 1 T G scaffold13499 Both SNP 0039.scaffold00152 886310 1 A T scaffold13499 Both SNP 0039.scaffold00152 886335 1 C T scaffold13499 Both INDEL 0039.scaffold00152 886505 1 . T scaffold13499 Both SNP 0039.scaffold00152 886597 1 T C scaffold13499 ScafM INDEL 0039.scaffold00152 886609 32 ................................ AAAGGATCCAAATTGCAAGATTTCCACATTAT scaffold13499 ScafM SNP 0039.scaffold00152 886622 1 A C scaffold13499 ScafM SNP 0039.scaffold00152 886861 2 GC AT scaffold13499 ScafM SNP 0039.scaffold00152 886868 1 G A scaffold13499 ScafM SNP 0039.scaffold00152 886874 2 GC AT scaffold13499 ReadM SNP 0039.scaffold00152 886902 1 T G - ReadM SNP 0039.scaffold00152 886950 1 G A - ReadM SNP 0039.scaffold00152 886983 1 C T - ScafM INDEL 0039.scaffold00152 887117 18 TTTTTTCAGCACTCCCAT .................. scaffold13499 ScafM SNP 0039.scaffold00152 887152 1 A G scaffold13499 Both SNP 0039.scaffold00152 887323 1 A G scaffold13499 Both SNP 0039.scaffold00152 887374 1 A G scaffold13499 Both SNP 0039.scaffold00152 887431 1 A G scaffold13499 Both SNP 0039.scaffold00152 887435 1 G T scaffold13499 ReadM SNP 0039.scaffold00152 887607 1 G A - ReadM SNP 0039.scaffold00152 887805 1 A G - ReadM SNP 0039.scaffold00152 887843 1 C T - ReadM SNP 0039.scaffold00152 887916 1 A G - ReadM SNP 0039.scaffold00152 887995 1 T A - ReadM SNP 0039.scaffold00152 888054 1 A C - ReadM SNP 0039.scaffold00152 888125 1 T C - ReadM SNP 0039.scaffold00152 888224 1 C T - ReadM SNP 0039.scaffold00152 888265 1 T C - ReadM SNP 0039.scaffold00152 888341 1 T C - ReadM SNP 0039.scaffold00152 888445 1 C A - Both SNP 0039.scaffold00152 888479 1 G T scaffold13499 Both SNP 0039.scaffold00152 888541 1 C A scaffold13499 Both SNP 0039.scaffold00152 888585 1 T C scaffold13499 ScafM SNP 0039.scaffold00152 888617 1 A G scaffold13499 ScafM SNP 0039.scaffold00152 888691 1 C A scaffold13499 ScafM SNP 0039.scaffold00152 888710 1 A T scaffold13499 ScafM SNP 0039.scaffold00152 898590 1 G T scaffold22255 ScafM INDEL 0039.scaffold00152 898595 2 AA .C scaffold22255 ScafM SNP 0039.scaffold00152 898598 1 A G scaffold22255 ScafM SNP 0039.scaffold00152 898643 1 A T scaffold22255 ScafM SNP 0039.scaffold00152 898652 1 T C scaffold22255 ScafM SNP 0039.scaffold00152 898720 2 TC AA scaffold22255 ScafM SNP 0039.scaffold00152 898726 1 G A scaffold22255 ScafM SNP 0039.scaffold00152 898737 2 AG TC scaffold22255 ScafM SNP 0039.scaffold00152 898791 1 C A scaffold22255 ScafM SNP 0039.scaffold00152 898806 1 C T scaffold22255 ScafM SNP 0039.scaffold00152 898813 1 A C scaffold22255 ReadM SNP 0039.scaffold00152 898817 1 C A - ScafM SNP 0039.scaffold00152 898827 3 ATG GAA scaffold22255 ScafM SNP 0039.scaffold00152 898876 1 A G scaffold22255 ScafM SNP 0039.scaffold00152 898884 1 G A scaffold22255 ScafM SNP 0039.scaffold00152 898899 2 AC GG scaffold22255 ReadM SNP 0039.scaffold00152 898900 1 C G - ScafM SNP 0039.scaffold00152 898921 1 C T scaffold22255 ScafM SNP 0039.scaffold00152 898924 1 A C scaffold22255 ScafM SNP 0039.scaffold00152 898928 1 C A scaffold22255 ScafM SNP 0039.scaffold00152 898942 1 G A scaffold22255 ScafM SNP 0039.scaffold00152 898954 1 A C scaffold22255 ScafM SNP 0039.scaffold00152 898962 1 G A scaffold22255 Both SNP 0039.scaffold00152 898965 1 G A scaffold22255 ScafM SNP 0039.scaffold00152 898971 2 AT GA scaffold22255 ScafM SNP 0039.scaffold00152 898974 2 GA AG scaffold22255 ScafM SNP 0039.scaffold00152 898978 2 AC GT scaffold22255 ScafM SNP 0039.scaffold00152 898989 2 AA GC scaffold22255 ScafM SNP 0039.scaffold00152 899003 1 C G scaffold22255 Both SNP 0039.scaffold00152 899017 1 G A scaffold22255 ScafM SNP 0039.scaffold00152 899064 2 GC AT scaffold22255 ScafM SNP 0039.scaffold00152 899086 1 T G scaffold22255 ScafM SNP 0039.scaffold00152 899109 1 T G scaffold22255 ScafM SNP 0039.scaffold00152 899113 1 A G scaffold22255 ScafM SNP 0039.scaffold00152 899133 1 T G scaffold22255 ScafM INDEL 0039.scaffold00152 899186 2 GA .T scaffold8134 ScafM SNP 0039.scaffold00152 899193 2 AT CC scaffold8134 ScafM SNP 0039.scaffold00152 899215 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 899253 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 899258 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 899275 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 900150 2 GT CG scaffold8134 ScafM SNP 0039.scaffold00152 900173 2 AG GA scaffold8134 ScafM SNP 0039.scaffold00152 900178 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 900200 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 900205 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 900220 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 900231 1 . A scaffold8134 ScafM SNP 0039.scaffold00152 900241 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 900246 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 900250 1 G T scaffold8134 ScafM INDEL 0039.scaffold00152 900272 8 CGGAATTA ........ scaffold8134 ScafM SNP 0039.scaffold00152 900359 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 900361 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 900378 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 900388 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 900424 1 C T scaffold8134 Both SNP 0039.scaffold00152 900721 1 A G scaffold8134 Both INDEL 0039.scaffold00152 900750 1 . T scaffold8134 Both SNP 0039.scaffold00152 900802 1 A G scaffold8134 Both SNP 0039.scaffold00152 900891 1 A G scaffold8134 Both SNP 0039.scaffold00152 901054 1 T C scaffold8134 Both SNP 0039.scaffold00152 901149 1 A T scaffold8134 Both SNP 0039.scaffold00152 901197 1 G A scaffold8134 Both SNP 0039.scaffold00152 901222 1 C T scaffold8134 Both SNP 0039.scaffold00152 901528 1 G A scaffold8134 Both SNP 0039.scaffold00152 902158 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 902208 1 T C scaffold8134 Both SNP 0039.scaffold00152 902263 1 C G scaffold8134 Both SNP 0039.scaffold00152 902487 1 G A scaffold8134 Both SNP 0039.scaffold00152 903396 1 A G scaffold8134 Both SNP 0039.scaffold00152 903612 1 T C scaffold8134 Both SNP 0039.scaffold00152 903818 1 C T scaffold8134 ReadM SNP 0039.scaffold00152 903972 1 A T - ReadM SNP 0039.scaffold00152 904286 1 G A - ReadM SNP 0039.scaffold00152 904298 1 A G - ReadM SNP 0039.scaffold00152 904381 1 G A - ReadM INDEL 0039.scaffold00152 904394 2 AG .. - ReadM SNP 0039.scaffold00152 904578 1 T C - ReadM SNP 0039.scaffold00152 904601 1 T C - ScafM INDEL 0039.scaffold00152 904760 30 .............................. GAAGCTAAACTTAAGAATAAAAATATATTA scaffold8134 ScafM INDEL 0039.scaffold00152 904798 1 . T scaffold8134 ScafM INDEL 0039.scaffold00152 905053 6 TATCAA ...... scaffold8134 Both SNP 0039.scaffold00152 905130 1 A G scaffold8134 Both SNP 0039.scaffold00152 905256 1 G A scaffold8134 Both SNP 0039.scaffold00152 905302 1 T G scaffold8134 Both INDEL 0039.scaffold00152 905321 2 .. TG scaffold8134 ScafM INDEL 0039.scaffold00152 905363 4 .... GGAT scaffold8134 ScafM SNP 0039.scaffold00152 905366 2 AA TG scaffold8134 ScafM SNP 0039.scaffold00152 905478 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 905504 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 905507 2 AA GG scaffold8134 ScafM SNP 0039.scaffold00152 905516 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 905529 1 T G scaffold8134 ScafM INDEL 0039.scaffold00152 905543 1 T . scaffold8134 ScafM INDEL 0039.scaffold00152 905547 24 TAAAATTGAAATCGTGTCATGGGG ........................ scaffold8134 ScafM SNP 0039.scaffold00152 905593 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 906168 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 906216 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 906252 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 906259 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 906276 2 .. TG scaffold8134 ScafM SNP 0039.scaffold00152 906335 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 906339 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 906360 1 T C scaffold8134 Both SNP 0039.scaffold00152 906364 1 G C scaffold8134 Both SNP 0039.scaffold00152 906470 1 T C scaffold8134 Both SNP 0039.scaffold00152 906518 1 T C scaffold8134 ReadM SNP 0039.scaffold00152 906580 1 C T - ReadM SNP 0039.scaffold00152 906589 1 G C - ReadM SNP 0039.scaffold00152 906692 1 C T - ReadM INDEL 0039.scaffold00152 906706 1 C . - ReadM SNP 0039.scaffold00152 906766 1 C T - ReadM SNP 0039.scaffold00152 906815 1 A T - ReadM SNP 0039.scaffold00152 906837 1 C T - ReadM SNP 0039.scaffold00152 906900 1 C T - ReadM SNP 0039.scaffold00152 906905 1 G A - ReadM SNP 0039.scaffold00152 906969 1 A T - ReadM SNP 0039.scaffold00152 907020 1 C T - ReadM SNP 0039.scaffold00152 907347 1 G A - ReadM SNP 0039.scaffold00152 907674 1 T C - ReadM SNP 0039.scaffold00152 907771 1 G C - ScafM SNP 0039.scaffold00152 907919 1 C A scaffold8134 ScafM SNP 0039.scaffold00152 907940 1 T C scaffold8134 Both SNP 0039.scaffold00152 908049 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 908175 1 A G scaffold8134 Both SNP 0039.scaffold00152 908179 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 908255 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 908478 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 908535 1 A G scaffold8134 Both SNP 0039.scaffold00152 908663 1 C G scaffold8134 ReadM SNP 0039.scaffold00152 908698 1 A C - ReadM SNP 0039.scaffold00152 908766 1 T A - ReadM INDEL 0039.scaffold00152 908792 1 . T - ReadM SNP 0039.scaffold00152 908944 1 G A - ReadM SNP 0039.scaffold00152 909016 1 T C - ReadM SNP 0039.scaffold00152 909073 1 T C - ReadM SNP 0039.scaffold00152 909110 1 A C - ReadM SNP 0039.scaffold00152 909264 1 G A - ReadM SNP 0039.scaffold00152 909450 1 T C - ReadM SNP 0039.scaffold00152 909500 1 T A - ReadM SNP 0039.scaffold00152 909575 1 C T - ScafM INDEL 0039.scaffold00152 909718 2 AA .. scaffold8134 Both SNP 0039.scaffold00152 909743 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 909911 13 ............. ATTCTCATCTTAA scaffold8134 Both INDEL 0039.scaffold00152 909976 3 ... TCA scaffold8134 ScafM SNP 0039.scaffold00152 910010 1 G C scaffold8134 ScafM INDEL 0039.scaffold00152 910072 3 ... GTA scaffold8134 ScafM INDEL 0039.scaffold00152 910162 1 . T scaffold8134 ScafM INDEL 0039.scaffold00152 910210 16 GTTGTATTGAACCATG ................ scaffold8134 ScafM SNP 0039.scaffold00152 910263 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 910298 1 A G scaffold8134 ReadM SNP 0039.scaffold00152 910403 1 A G - ReadM SNP 0039.scaffold00152 910434 1 C T - ReadM SNP 0039.scaffold00152 910502 1 A G - ScafM INDEL 0039.scaffold00152 910801 3 TTT ... scaffold8134 ScafM SNP 0039.scaffold00152 910824 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 911167 2 .. TT scaffold8134 ScafM SNP 0039.scaffold00152 911308 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 911549 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 911630 1 C T scaffold8134 ReadM SNP 0039.scaffold00152 911779 1 G A - ReadM SNP 0039.scaffold00152 911788 1 A G - ReadM SNP 0039.scaffold00152 911806 1 T G - ReadM SNP 0039.scaffold00152 911905 1 G A - ReadM SNP 0039.scaffold00152 913791 1 T C - ReadM SNP 0039.scaffold00152 913878 1 T C - ScafM SNP 0039.scaffold00152 914364 2 TC CT scaffold8134 ScafM INDEL 0039.scaffold00152 914508 4 .... TAAT scaffold8134 ScafM SNP 0039.scaffold00152 914511 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 914539 5 TAATT ..... scaffold8134 ScafM SNP 0039.scaffold00152 914558 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 914561 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 914574 1 T . scaffold8134 ScafM SNP 0039.scaffold00152 914586 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 914834 1 T A scaffold8134 ScafM INDEL 0039.scaffold00152 914843 4 .... TTAA scaffold8134 ScafM SNP 0039.scaffold00152 914847 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 914859 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 914869 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 914877 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 914901 1 . A scaffold8134 ScafM SNP 0039.scaffold00152 914946 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 914961 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 914970 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 914972 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 914974 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 915007 3 TTT .AA scaffold8134 ScafM SNP 0039.scaffold00152 915022 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 915039 1 G C scaffold8134 ScafM SNP 0039.scaffold00152 915091 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 915112 7 AATAGGT ....... scaffold8134 ScafM SNP 0039.scaffold00152 915180 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 915388 2 GA AT scaffold8134 ReadM INDEL 0039.scaffold00152 915866 1 T . - ScafM SNP 0039.scaffold00152 916060 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916255 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 916257 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916279 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916308 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 916329 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916335 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916367 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 916380 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 916386 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 916433 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 916445 1 C A scaffold8134 ScafM SNP 0039.scaffold00152 916463 2 CT TA scaffold8134 ScafM SNP 0039.scaffold00152 916468 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 916511 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 916514 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 916543 2 TC CA scaffold8134 ScafM SNP 0039.scaffold00152 916559 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 916572 2 .T CC scaffold8134 ScafM SNP 0039.scaffold00152 916674 1 C G scaffold8134 ScafM INDEL 0039.scaffold00152 916695 3 ... ATT scaffold8134 ScafM SNP 0039.scaffold00152 916706 1 G T scaffold8134 ScafM INDEL 0039.scaffold00152 916711 7 ....... TCATAAT scaffold8134 ScafM SNP 0039.scaffold00152 916723 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 916731 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 916733 1 C T scaffold8134 Both SNP 0039.scaffold00152 916852 1 C T scaffold8134 Both SNP 0039.scaffold00152 917027 1 C G scaffold8134 Both SNP 0039.scaffold00152 917111 1 A T scaffold8134 Both SNP 0039.scaffold00152 917237 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 917343 1 T A scaffold8134 ScafM SNP 0039.scaffold00152 917376 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 917385 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 917394 1 C T scaffold8134 Both SNP 0039.scaffold00152 917425 1 G T scaffold8134 Both SNP 0039.scaffold00152 917515 1 A G scaffold8134 Both SNP 0039.scaffold00152 917663 1 C T scaffold8134 Both SNP 0039.scaffold00152 917681 1 T A scaffold8134 ScafM INDEL 0039.scaffold00152 917752 4 .... AATT scaffold8134 ScafM SNP 0039.scaffold00152 917780 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 918024 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 918030 12 ............ AACAATTCTTTC scaffold8134 ScafM SNP 0039.scaffold00152 918037 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 918071 1 G . scaffold8134 ScafM SNP 0039.scaffold00152 918096 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 918105 1 A G scaffold8134 Both SNP 0039.scaffold00152 918123 1 C G scaffold8134 Both SNP 0039.scaffold00152 918215 1 A C scaffold8134 Both SNP 0039.scaffold00152 918249 1 A G scaffold8134 Both SNP 0039.scaffold00152 918298 1 G A scaffold8134 Both SNP 0039.scaffold00152 918320 1 T G scaffold8134 Both SNP 0039.scaffold00152 918350 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 918393 1 A G scaffold8134 ReadM SNP 0039.scaffold00152 918624 1 A G - ReadM SNP 0039.scaffold00152 919279 1 G A - ReadM INDEL 0039.scaffold00152 919565 1 A . - ReadM SNP 0039.scaffold00152 919603 1 G A - ReadM SNP 0039.scaffold00152 919642 1 G A - ReadM SNP 0039.scaffold00152 919809 1 A T - ReadM SNP 0039.scaffold00152 919842 1 G A - Both SNP 0039.scaffold00152 920043 1 A G scaffold8134 Both SNP 0039.scaffold00152 920319 1 T A scaffold8134 Both SNP 0039.scaffold00152 920480 1 T C scaffold8134 Both SNP 0039.scaffold00152 920578 1 A G scaffold8134 Both SNP 0039.scaffold00152 920623 1 C G scaffold8134 Both INDEL 0039.scaffold00152 920634 1 T . scaffold8134 Both SNP 0039.scaffold00152 920648 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 920876 1 T C scaffold8134 ScafM INDEL 0039.scaffold00152 920880 4 .... ATTG scaffold8134 ScafM INDEL 0039.scaffold00152 920909 4 CATA .... scaffold8134 ScafM INDEL 0039.scaffold00152 921036 6 TTCCTA ...... scaffold8134 ScafM SNP 0039.scaffold00152 921096 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 921110 1 C G scaffold8134 ScafM SNP 0039.scaffold00152 921138 1 C A scaffold8134 ScafM SNP 0039.scaffold00152 921140 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 921193 1 G C scaffold8134 ReadM SNP 0039.scaffold00152 921388 1 A C - ReadM SNP 0039.scaffold00152 921432 1 G A - ReadM SNP 0039.scaffold00152 921687 1 C A - ScafM SNP 0039.scaffold00152 922229 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 922236 1 T G scaffold8134 ScafM SNP 0039.scaffold00152 922424 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 922502 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 922956 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 922976 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 922997 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 923024 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 923027 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 923031 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 923059 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 923066 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 923200 1 G C scaffold8134 ScafM INDEL 0039.scaffold00152 923208 4 .... TAAT scaffold8134 ScafM INDEL 0039.scaffold00152 923229 1 T . scaffold8134 ScafM SNP 0039.scaffold00152 923232 1 A T scaffold8134 ScafM SNP 0039.scaffold00152 923259 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 923270 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 923273 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 923293 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 923315 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 923347 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 923361 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 923472 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 923479 1 C T scaffold8134 ScafM INDEL 0039.scaffold00152 923484 3 ATA ... scaffold8134 ScafM SNP 0039.scaffold00152 923517 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 923605 5 AGTAC ..... scaffold8134 ScafM INDEL 0039.scaffold00152 923654 1 T . scaffold8134 ScafM SNP 0039.scaffold00152 923668 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 923719 1 G A scaffold8134 ScafM INDEL 0039.scaffold00152 923752 66 CATTTTTGAGAAACGTAGGGAGTATATGTATGTATATGTATATATATACAATTTACATTAATTAGC .................................................................. scaffold8134 ScafM INDEL 0039.scaffold00152 923851 4 .... ATAA scaffold8134 ScafM SNP 0039.scaffold00152 923879 1 T C scaffold8134 ScafM SNP 0039.scaffold00152 923897 1 C T scaffold8134 ScafM SNP 0039.scaffold00152 923903 1 T A scaffold8134 Both SNP 0039.scaffold00152 924640 1 C G scaffold8134 ScafM INDEL 0039.scaffold00152 924681 8 TCATCCTA ........ scaffold8134 Both SNP 0039.scaffold00152 924960 1 C T scaffold8134 Both SNP 0039.scaffold00152 924984 1 G A scaffold8134 ReadM SNP 0039.scaffold00152 925526 1 G A - ReadM INDEL 0039.scaffold00152 925548 1 . T - ScafM SNP 0039.scaffold00152 931980 2 AA GG scaffold8134 ScafM SNP 0039.scaffold00152 931983 2 GG AA scaffold8134 ScafM SNP 0039.scaffold00152 932021 1 A G scaffold8134 ScafM SNP 0039.scaffold00152 932098 1 G A scaffold8134 ScafM SNP 0039.scaffold00152 932111 2 GC TT scaffold8134 ScafM SNP 0039.scaffold00152 932115 1 G T scaffold8134 ScafM SNP 0039.scaffold00152 932227 1 A C scaffold8134 ScafM SNP 0039.scaffold00152 932250 1 A G scaffold8134 ScafM INDEL 0039.scaffold00152 932257 1 A . scaffold8134 ScafM SNP 0039.scaffold00152 932267 1 G C scaffold8134 ScafM INDEL 0039.scaffold00152 932540 2 AT .. scaffold40376 ScafM SNP 0039.scaffold00152 932660 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 932684 1 T A scaffold40376 ScafM SNP 0039.scaffold00152 932716 1 T C scaffold40376 ScafM SNP 0039.scaffold00152 932720 1 A G scaffold40376 ScafM INDEL 0039.scaffold00152 932748 13 ............. TTTATCTGTTTTT scaffold40376 ScafM SNP 0039.scaffold00152 932800 1 G A scaffold40376 ScafM SNP 0039.scaffold00152 932817 1 T G scaffold40376 ScafM SNP 0039.scaffold00152 932938 1 T G scaffold40376 ScafM SNP 0039.scaffold00152 932950 1 G A scaffold40376 ScafM INDEL 0039.scaffold00152 933007 2 AT .. scaffold40376 Both SNP 0039.scaffold00152 933025 1 A G scaffold40376 Both SNP 0039.scaffold00152 933044 1 G A scaffold40376 Both SNP 0039.scaffold00152 933064 1 C A scaffold40376 Both SNP 0039.scaffold00152 933123 1 T A scaffold40376 ScafM SNP 0039.scaffold00152 933164 2 AT GA scaffold40376 ScafM SNP 0039.scaffold00152 933177 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 933193 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 933212 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 933693 1 T C scaffold40376 ScafM SNP 0039.scaffold00152 933695 1 G A scaffold40376 ScafM SNP 0039.scaffold00152 933709 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 933877 1 G C scaffold40376 ScafM SNP 0039.scaffold00152 934719 2 TT CC scaffold40376 ScafM SNP 0039.scaffold00152 934781 1 A T scaffold40376 ScafM INDEL 0039.scaffold00152 934783 5 ..... TAATA scaffold40376 ScafM SNP 0039.scaffold00152 934792 1 A G scaffold40376 ScafM INDEL 0039.scaffold00152 934802 1 A . scaffold40376 ScafM INDEL 0039.scaffold00152 934833 1 A . scaffold40376 ReadM SNP 0039.scaffold00152 935428 1 A G - Both SNP 0039.scaffold00152 935570 1 G A scaffold40376 Both SNP 0039.scaffold00152 935672 1 G C scaffold40376 ReadM SNP 0039.scaffold00152 936058 1 C T - ReadM SNP 0039.scaffold00152 936186 1 G A - ScafM SNP 0039.scaffold00152 938111 1 A G scaffold40376 ScafM INDEL 0039.scaffold00152 938127 4 CCCG .... scaffold40376 ScafM SNP 0039.scaffold00152 938134 1 G T scaffold40376 ScafM INDEL 0039.scaffold00152 938169 3 AAA ... scaffold40376 ScafM SNP 0039.scaffold00152 938173 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 938191 1 A T scaffold40376 ScafM SNP 0039.scaffold00152 938756 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 938762 1 C A scaffold40376 ScafM SNP 0039.scaffold00152 938768 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 938795 1 T C scaffold40376 ScafM INDEL 0039.scaffold00152 938962 1 G . scaffold40376 ScafM INDEL 0039.scaffold00152 938965 1 . A scaffold40376 ScafM SNP 0039.scaffold00152 938968 1 G T scaffold40376 ScafM SNP 0039.scaffold00152 938975 2 AC CA scaffold40376 Both SNP 0039.scaffold00152 939613 1 T A scaffold40376 Both SNP 0039.scaffold00152 939629 1 C A scaffold40376 Both SNP 0039.scaffold00152 939739 1 C A scaffold40376 Both SNP 0039.scaffold00152 939820 1 A T scaffold40376 Both SNP 0039.scaffold00152 939871 1 T C scaffold40376 Both SNP 0039.scaffold00152 939941 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 940105 1 T C scaffold40376 ScafM SNP 0039.scaffold00152 940115 1 G A scaffold40376 ScafM SNP 0039.scaffold00152 940122 1 T G scaffold40376 ScafM SNP 0039.scaffold00152 940128 1 G T scaffold40376 ScafM SNP 0039.scaffold00152 940134 1 G A scaffold40376 ScafM INDEL 0039.scaffold00152 940158 1 T . scaffold40376 ScafM INDEL 0039.scaffold00152 940186 1 . C scaffold40376 ScafM SNP 0039.scaffold00152 940207 2 TA CG scaffold40376 ScafM SNP 0039.scaffold00152 940216 1 G A scaffold40376 ScafM INDEL 0039.scaffold00152 940227 4 TTTT ...G scaffold40376 ScafM SNP 0039.scaffold00152 940252 1 A C scaffold40376 ScafM SNP 0039.scaffold00152 940267 1 C A scaffold40376 ScafM INDEL 0039.scaffold00152 940273 8 ........ AACATTTT scaffold40376 ScafM SNP 0039.scaffold00152 940291 1 C T scaffold40376 ScafM INDEL 0039.scaffold00152 940294 1 G . scaffold40376 ScafM INDEL 0039.scaffold00152 940296 1 T . scaffold40376 ScafM INDEL 0039.scaffold00152 940318 5 CCTTT ..... scaffold40376 ScafM SNP 0039.scaffold00152 940341 1 T A scaffold40376 ScafM SNP 0039.scaffold00152 940533 2 CC TT scaffold40376 Both SNP 0039.scaffold00152 940583 1 A T scaffold40376 Both SNP 0039.scaffold00152 940625 1 A T scaffold40376 ScafM INDEL 0039.scaffold00152 940774 6 ...... CAATTT scaffold40376 Both SNP 0039.scaffold00152 940864 1 G C scaffold40376 Both SNP 0039.scaffold00152 940942 1 A G scaffold40376 Both SNP 0039.scaffold00152 941014 1 C G scaffold40376 Both INDEL 0039.scaffold00152 941089 1 . T scaffold40376 Both SNP 0039.scaffold00152 941909 1 C A scaffold40376 Both SNP 0039.scaffold00152 941944 1 G A scaffold40376 Both INDEL 0039.scaffold00152 942333 2 .. AT scaffold40376 Both SNP 0039.scaffold00152 942821 1 C A scaffold40376 ReadM SNP 0039.scaffold00152 943006 1 A C - ScafM SNP 0039.scaffold00152 943154 1 A G scaffold40376 ScafM SNP 0039.scaffold00152 943360 1 T C scaffold40376 ScafM SNP 0039.scaffold00152 943367 1 T A scaffold40376 ScafM SNP 0039.scaffold00152 943429 1 T A scaffold40376 ScafM SNP 0039.scaffold00152 943431 1 C A scaffold40376 ScafM SNP 0039.scaffold00152 943491 1 A G scaffold40376 ScafM INDEL 0039.scaffold00152 943492 3 ... TCA scaffold40376 ScafM SNP 0039.scaffold00152 943499 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 943503 1 T C scaffold40376 ScafM SNP 0039.scaffold00152 943516 1 A T scaffold40376 ScafM SNP 0039.scaffold00152 943548 1 A C scaffold40376 ScafM SNP 0039.scaffold00152 943562 1 A T scaffold40376 ScafM SNP 0039.scaffold00152 943570 1 A T scaffold40376 ScafM SNP 0039.scaffold00152 943590 1 C T scaffold40376 ScafM SNP 0039.scaffold00152 943608 2 AT TC scaffold40376 ScafM INDEL 0039.scaffold00152 943624 3 ... ATT scaffold40376 ScafM SNP 0039.scaffold00152 943629 1 T G scaffold40376 ScafM SNP 0039.scaffold00152 943631 1 G C scaffold40376 ReadM SNP 0039.scaffold00152 945391 1 T C - ReadM SNP 0039.scaffold00152 945610 1 G T - ScafM SNP 0039.scaffold00152 945967 1 A G scaffold1252 ScafM SNP 0039.scaffold00152 945976 1 C T scaffold1252 ScafM SNP 0039.scaffold00152 946017 1 C T scaffold1252 ScafM SNP 0039.scaffold00152 946070 1 C A scaffold1252 ScafM SNP 0039.scaffold00152 946278 1 A G scaffold1252 ScafM SNP 0039.scaffold00152 946312 1 A C scaffold1252 ScafM SNP 0039.scaffold00152 946314 1 T C scaffold1252 ScafM INDEL 0039.scaffold00152 946377 3 ... ATC scaffold1252 ScafM SNP 0039.scaffold00152 946827 1 T C scaffold1252 ScafM SNP 0039.scaffold00152 946854 1 A T scaffold1252 ScafM SNP 0039.scaffold00152 946856 1 C A scaffold1252 ScafM SNP 0039.scaffold00152 946896 1 T C scaffold1252 ScafM SNP 0039.scaffold00152 949508 1 T C scaffold21567 ScafM SNP 0039.scaffold00152 949522 1 C A scaffold21567 ScafM SNP 0039.scaffold00152 949528 1 C G scaffold21567 ScafM SNP 0039.scaffold00152 949554 1 G C scaffold21567 ScafM INDEL 0039.scaffold00152 949589 1 . T scaffold21567 ScafM SNP 0039.scaffold00152 949593 1 C T scaffold21567 ScafM SNP 0039.scaffold00152 949607 1 C T scaffold21567 ScafM SNP 0039.scaffold00152 949609 2 TG GA scaffold21567 ScafM SNP 0039.scaffold00152 949686 1 T C scaffold21567 ScafM SNP 0039.scaffold00152 949741 1 T G scaffold21567 Both SNP 0039.scaffold00152 954176 1 C T scaffold3789 Both SNP 0039.scaffold00152 954234 1 G A scaffold3789 Both SNP 0039.scaffold00152 954257 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 954360 1 T G scaffold3789 ScafM INDEL 0039.scaffold00152 954367 7 TGTTGCC ....... scaffold3789 Both SNP 0039.scaffold00152 954404 1 G A scaffold3789 Both SNP 0039.scaffold00152 954485 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 954558 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 954570 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 954581 1 A T scaffold3789 Both SNP 0039.scaffold00152 954598 1 A G scaffold3789 Both SNP 0039.scaffold00152 954657 1 A G scaffold3789 ReadM SNP 0039.scaffold00152 954730 1 A C - ReadM SNP 0039.scaffold00152 954742 1 A C - ScafM SNP 0039.scaffold00152 954784 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 954809 2 TA CC scaffold3789 ScafM SNP 0039.scaffold00152 954812 1 G A scaffold3789 ScafM INDEL 0039.scaffold00152 954819 1 . A scaffold3789 ScafM SNP 0039.scaffold00152 954829 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 954831 2 TT CA scaffold3789 ScafM SNP 0039.scaffold00152 954860 2 CG TC scaffold3789 ReadM SNP 0039.scaffold00152 955021 1 C T - ReadM SNP 0039.scaffold00152 955025 1 A G - ReadM SNP 0039.scaffold00152 955033 1 A C - ScafM SNP 0039.scaffold00152 955266 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 955269 1 A G scaffold3789 ScafM INDEL 0039.scaffold00152 955297 1 C . scaffold3789 ScafM SNP 0039.scaffold00152 955313 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 955341 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955349 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 955387 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 955410 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955437 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 955448 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 955458 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955467 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955475 1 G T scaffold3789 ScafM INDEL 0039.scaffold00152 955481 2 .. AA scaffold3789 ScafM SNP 0039.scaffold00152 955483 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 955503 1 A G scaffold3789 ScafM INDEL 0039.scaffold00152 955544 1 T . scaffold3789 ScafM SNP 0039.scaffold00152 955548 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955579 1 A T scaffold3789 ScafM INDEL 0039.scaffold00152 955585 2 AC .. scaffold3789 ScafM SNP 0039.scaffold00152 955602 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 955614 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 955623 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 955648 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 955684 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 955720 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 955743 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 955760 1 T A scaffold3789 ScafM INDEL 0039.scaffold00152 955769 1 T . scaffold3789 ScafM SNP 0039.scaffold00152 955775 1 T C scaffold3789 ScafM INDEL 0039.scaffold00152 955787 2 AG .. scaffold3789 ScafM INDEL 0039.scaffold00152 955799 5 TGATT ..... scaffold3789 ScafM INDEL 0039.scaffold00152 955805 3 ATG ... scaffold3789 ScafM INDEL 0039.scaffold00152 955809 1 C . scaffold3789 ScafM SNP 0039.scaffold00152 955852 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 955867 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 955909 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 955921 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 955957 2 GC AG scaffold3789 ScafM SNP 0039.scaffold00152 955967 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 955985 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 956006 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 956022 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 956034 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 956047 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 956087 1 A C scaffold3789 ScafM INDEL 0039.scaffold00152 956090 4 GGGT .... scaffold3789 ScafM INDEL 0039.scaffold00152 956096 3 ..A GGG scaffold3789 ScafM SNP 0039.scaffold00152 956109 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 956111 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 956113 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 956121 1 C G scaffold3789 ScafM SNP 0039.scaffold00152 956123 3 CTA ACG scaffold3789 ScafM SNP 0039.scaffold00152 956130 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 956140 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 956169 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 956210 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 956212 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 956249 1 T C scaffold3789 ScafM INDEL 0039.scaffold00152 956251 3 ATT ... scaffold3789 ScafM SNP 0039.scaffold00152 956258 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 956349 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 956353 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 956390 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 956401 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 956419 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 956429 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 959275 1 C T scaffold7030 ScafM SNP 0039.scaffold00152 964629 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 964643 2 CA TC scaffold3789 ScafM SNP 0039.scaffold00152 964703 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 964733 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 964749 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 964759 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 964820 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 964849 2 GC CT scaffold3789 ScafM SNP 0039.scaffold00152 964852 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 964899 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 964903 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 964916 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 964931 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 964942 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 964969 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 964981 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 964985 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 964992 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 964995 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 965016 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 965024 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 965031 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 965061 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 965072 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 965100 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 965153 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 965162 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 965171 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 965178 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 965238 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 965252 1 A G scaffold3789 ScafM INDEL 0039.scaffold00152 965255 2 .. TA scaffold3789 ScafM SNP 0039.scaffold00152 965266 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 965277 1 G A scaffold3789 ScafM INDEL 0039.scaffold00152 965304 1 T . scaffold3789 ScafM INDEL 0039.scaffold00152 965326 3 ATA ... scaffold3789 ScafM INDEL 0039.scaffold00152 965345 2 AT .C scaffold3789 ScafM INDEL 0039.scaffold00152 965373 2 AA .. scaffold3789 ScafM INDEL 0039.scaffold00152 965376 3 AAA ... scaffold3789 ScafM SNP 0039.scaffold00152 965380 1 T G scaffold3789 ScafM INDEL 0039.scaffold00152 965382 7 TTTTTTC ....... scaffold3789 ScafM SNP 0039.scaffold00152 965413 1 C G scaffold3789 ScafM SNP 0039.scaffold00152 965563 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 965585 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 965617 1 A G scaffold3789 Both SNP 0039.scaffold00152 965724 1 C T scaffold3789 Both INDEL 0039.scaffold00152 965743 1 G . scaffold3789 Both SNP 0039.scaffold00152 965772 1 T G scaffold3789 Both INDEL 0039.scaffold00152 965840 1 . T scaffold3789 ReadM SNP 0039.scaffold00152 965874 1 C A - Both SNP 0039.scaffold00152 965908 1 T G scaffold3789 Both SNP 0039.scaffold00152 965969 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 966051 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 966057 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 966065 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 966067 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 966074 2 GT AC scaffold3789 ScafM SNP 0039.scaffold00152 966091 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 966121 3 TGT CCC scaffold3789 ScafM SNP 0039.scaffold00152 966142 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 966148 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 966172 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 966186 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 966202 1 A T scaffold3789 ScafM INDEL 0039.scaffold00152 966239 1 A . scaffold3789 Both SNP 0039.scaffold00152 966258 1 C G scaffold3789 Both SNP 0039.scaffold00152 966286 1 C T scaffold3789 Both SNP 0039.scaffold00152 966320 1 C T scaffold3789 Both SNP 0039.scaffold00152 966351 1 A G scaffold3789 Both SNP 0039.scaffold00152 966397 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 966437 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 966441 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 966448 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 966450 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 966465 1 G T scaffold3789 ReadM INDEL 0039.scaffold00152 966507 1 . T - ScafM INDEL 0039.scaffold00152 966507 2 .A TT scaffold3789 Both SNP 0039.scaffold00152 966590 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 966614 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 966627 2 GA AG scaffold3789 ScafM SNP 0039.scaffold00152 966644 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 966658 2 AA TT scaffold3789 ScafM SNP 0039.scaffold00152 966713 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 966717 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 966719 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 966771 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 966773 1 C T scaffold3789 Both SNP 0039.scaffold00152 966820 1 A C scaffold3789 Both SNP 0039.scaffold00152 966870 1 C A scaffold3789 Both SNP 0039.scaffold00152 966877 1 T A scaffold3789 Both SNP 0039.scaffold00152 966899 1 G A scaffold3789 Both SNP 0039.scaffold00152 966949 1 T G scaffold3789 Both SNP 0039.scaffold00152 967033 1 A G scaffold3789 Both SNP 0039.scaffold00152 967061 1 C T scaffold3789 ScafM INDEL 0039.scaffold00152 967097 2 .. TG scaffold3789 Both SNP 0039.scaffold00152 967197 1 A G scaffold3789 Both SNP 0039.scaffold00152 967389 1 C G scaffold3789 Both SNP 0039.scaffold00152 967451 1 C T scaffold3789 Both INDEL 0039.scaffold00152 967466 1 . T scaffold3789 Both SNP 0039.scaffold00152 967478 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 967532 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 967534 1 G T scaffold3789 Both SNP 0039.scaffold00152 967558 1 G A scaffold3789 Both SNP 0039.scaffold00152 967591 1 G C scaffold3789 Both SNP 0039.scaffold00152 967643 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 967758 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 967771 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 967777 1 G C scaffold3789 ScafM INDEL 0039.scaffold00152 967785 1 T . scaffold3789 ScafM SNP 0039.scaffold00152 967808 1 C G scaffold3789 ScafM SNP 0039.scaffold00152 967810 2 TG CA scaffold3789 ScafM SNP 0039.scaffold00152 967820 1 T C scaffold3789 Both SNP 0039.scaffold00152 967959 1 T G scaffold3789 ScafM INDEL 0039.scaffold00152 967999 4 .... TGCT scaffold3789 ReadM SNP 0039.scaffold00152 968087 1 T C - ScafM SNP 0039.scaffold00152 968237 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 968250 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 968260 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 968263 1 T C scaffold3789 Both SNP 0039.scaffold00152 968320 1 A G scaffold3789 Both SNP 0039.scaffold00152 968409 1 G A scaffold3789 Both SNP 0039.scaffold00152 968421 1 G A scaffold3789 Both SNP 0039.scaffold00152 968432 1 T A scaffold3789 Both SNP 0039.scaffold00152 968532 1 T C scaffold3789 Both SNP 0039.scaffold00152 968578 1 G T scaffold3789 Both SNP 0039.scaffold00152 968610 1 G A scaffold3789 Both SNP 0039.scaffold00152 968631 1 T C scaffold3789 Both SNP 0039.scaffold00152 968688 1 G A scaffold3789 Both SNP 0039.scaffold00152 968703 1 T C scaffold3789 ScafM INDEL 0039.scaffold00152 968819 1 C . scaffold3789 ScafM INDEL 0039.scaffold00152 968826 1 . G scaffold3789 Both SNP 0039.scaffold00152 968878 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 969042 2 GC CT scaffold3789 ScafM SNP 0039.scaffold00152 969051 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 969053 1 A G scaffold3789 Both SNP 0039.scaffold00152 969095 1 G A scaffold3789 Both SNP 0039.scaffold00152 969115 1 C T scaffold3789 Both INDEL 0039.scaffold00152 969217 1 . T scaffold3789 ScafM SNP 0039.scaffold00152 969245 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 969261 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 969264 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 969270 1 T A scaffold3789 ScafM INDEL 0039.scaffold00152 969276 8 ........ TCCTTGGC scaffold3789 ScafM INDEL 0039.scaffold00152 969371 5 ..... AAGTA scaffold3789 ScafM INDEL 0039.scaffold00152 969372 3 ... TTA scaffold3789 Both SNP 0039.scaffold00152 969417 1 T C scaffold3789 Both SNP 0039.scaffold00152 969454 1 T C scaffold3789 Both SNP 0039.scaffold00152 969486 1 A C scaffold3789 Both SNP 0039.scaffold00152 969499 1 A C scaffold3789 Both SNP 0039.scaffold00152 969504 1 G A scaffold3789 Both SNP 0039.scaffold00152 969629 1 A G scaffold3789 Both SNP 0039.scaffold00152 969652 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 969870 1 T G scaffold3789 Both SNP 0039.scaffold00152 969876 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 969895 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 969951 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 969954 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 969967 1 T C scaffold3789 Both SNP 0039.scaffold00152 969971 1 C A scaffold3789 Both SNP 0039.scaffold00152 970040 1 T C scaffold3789 Both INDEL 0039.scaffold00152 970086 2 .. TA scaffold3789 Both SNP 0039.scaffold00152 970158 1 C T scaffold3789 Both SNP 0039.scaffold00152 970198 1 C T scaffold3789 Both SNP 0039.scaffold00152 970237 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 970320 2 GT TA scaffold3789 ScafM INDEL 0039.scaffold00152 970372 10 TCCAAATAAA .......... scaffold3789 Both SNP 0039.scaffold00152 970426 1 C A scaffold3789 ReadM SNP 0039.scaffold00152 970477 1 A G - ReadM SNP 0039.scaffold00152 970495 1 A T - ReadM SNP 0039.scaffold00152 970568 1 C T - ReadM SNP 0039.scaffold00152 970652 1 T C - Both SNP 0039.scaffold00152 970681 1 A C scaffold3789 Both SNP 0039.scaffold00152 970729 1 G A scaffold3789 ReadM SNP 0039.scaffold00152 970780 1 A T - ReadM SNP 0039.scaffold00152 970789 1 G T - ReadM SNP 0039.scaffold00152 970796 1 G A - ReadM SNP 0039.scaffold00152 970886 1 A G - ReadM SNP 0039.scaffold00152 970915 1 G A - Both SNP 0039.scaffold00152 971065 1 T C scaffold3789 Both SNP 0039.scaffold00152 971101 1 C A scaffold3789 Both INDEL 0039.scaffold00152 971141 1 T . scaffold3789 Both SNP 0039.scaffold00152 971145 1 T C scaffold3789 Both SNP 0039.scaffold00152 971236 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 971564 1 T G scaffold3789 ScafM INDEL 0039.scaffold00152 971689 1 T . scaffold3789 ScafM SNP 0039.scaffold00152 971713 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 971717 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 971752 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 971755 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 971765 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 971785 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 971789 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 971804 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 971807 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 971841 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 972175 1 A G scaffold1651 ScafM SNP 0039.scaffold00152 972180 1 T C scaffold1651 ScafM SNP 0039.scaffold00152 972198 1 T C scaffold1651 ScafM SNP 0039.scaffold00152 972221 1 G T scaffold1651 ScafM SNP 0039.scaffold00152 972226 1 C G scaffold1651 ScafM SNP 0039.scaffold00152 972254 1 C T scaffold1651 ScafM SNP 0039.scaffold00152 972266 1 C T scaffold1651 ScafM SNP 0039.scaffold00152 972291 1 G C scaffold1651 ScafM SNP 0039.scaffold00152 972326 1 A G scaffold1651 ScafM SNP 0039.scaffold00152 972362 2 CA TG scaffold1651 ScafM SNP 0039.scaffold00152 972376 1 T G scaffold1651 ScafM SNP 0039.scaffold00152 972391 1 G T scaffold1651 ScafM SNP 0039.scaffold00152 972396 1 A G scaffold1651 ScafM INDEL 0039.scaffold00152 972408 1 . G scaffold1651 ScafM SNP 0039.scaffold00152 972422 1 G T scaffold1651 ScafM SNP 0039.scaffold00152 972428 1 C G scaffold1651 ScafM SNP 0039.scaffold00152 972443 1 T C scaffold1651 ScafM SNP 0039.scaffold00152 972449 1 A G scaffold1651 ScafM SNP 0039.scaffold00152 972458 2 CA TG scaffold1651 ScafM SNP 0039.scaffold00152 973840 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 973846 2 AG GA scaffold3789 ScafM SNP 0039.scaffold00152 973887 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 974417 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 974433 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 974442 2 CA TG scaffold3789 ScafM SNP 0039.scaffold00152 974482 1 G T scaffold3789 ScafM SNP 0039.scaffold00152 974486 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 974504 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 974520 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 974524 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 974553 1 T A scaffold3789 Both SNP 0039.scaffold00152 974626 1 T C scaffold3789 Both SNP 0039.scaffold00152 974628 1 G A scaffold3789 Both SNP 0039.scaffold00152 974649 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 974688 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 974718 1 A C scaffold3789 ScafM SNP 0039.scaffold00152 974720 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 974723 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 974725 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 974736 1 C A scaffold3789 Both SNP 0039.scaffold00152 974772 1 G A scaffold3789 Both SNP 0039.scaffold00152 974798 1 C A scaffold3789 Both SNP 0039.scaffold00152 974969 1 A C scaffold3789 ScafM INDEL 0039.scaffold00152 975019 1 . A scaffold3789 ScafM SNP 0039.scaffold00152 975026 1 G A scaffold3789 ScafM INDEL 0039.scaffold00152 975053 11 TTAATCAATTT ........... scaffold3789 ScafM INDEL 0039.scaffold00152 975065 3 AGA ... scaffold3789 ScafM INDEL 0039.scaffold00152 975072 3 CCC ... scaffold3789 ScafM INDEL 0039.scaffold00152 975078 3 AAC ... scaffold3789 ScafM INDEL 0039.scaffold00152 975087 1 C . scaffold3789 ScafM SNP 0039.scaffold00152 975092 3 CGC TAT scaffold3789 ScafM INDEL 0039.scaffold00152 975114 1 . T scaffold3789 ScafM SNP 0039.scaffold00152 975421 1 T A scaffold3789 ScafM SNP 0039.scaffold00152 975430 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 975432 2 CA GG scaffold3789 ScafM INDEL 0039.scaffold00152 975434 1 . C scaffold3789 ScafM INDEL 0039.scaffold00152 975440 2 TC .. scaffold3789 ScafM SNP 0039.scaffold00152 975455 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 975463 2 AA GG scaffold3789 ScafM SNP 0039.scaffold00152 975496 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 975508 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 975517 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 975524 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 975544 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 975556 1 A T scaffold3789 ScafM SNP 0039.scaffold00152 975568 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 975578 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 975582 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 975585 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 975594 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 975598 1 C A scaffold3789 ScafM SNP 0039.scaffold00152 975627 1 G A scaffold3789 ScafM INDEL 0039.scaffold00152 975668 1 . A scaffold3789 ScafM SNP 0039.scaffold00152 975671 1 T G scaffold3789 ScafM SNP 0039.scaffold00152 975701 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 975707 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 975732 1 G A scaffold3789 ScafM SNP 0039.scaffold00152 975777 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 975782 1 C T scaffold3789 ScafM SNP 0039.scaffold00152 975785 2 CA TG scaffold3789 ReadM SNP 0039.scaffold00152 975883 1 A C - ReadM SNP 0039.scaffold00152 975919 1 G T - ReadM SNP 0039.scaffold00152 975963 1 A G - ReadM SNP 0039.scaffold00152 976004 1 T A - ReadM SNP 0039.scaffold00152 976007 1 C T - ReadM SNP 0039.scaffold00152 976070 1 G A - ReadM SNP 0039.scaffold00152 976272 1 T C - ReadM SNP 0039.scaffold00152 976286 1 C T - ReadM SNP 0039.scaffold00152 976290 1 T C - ScafM SNP 0039.scaffold00152 976576 1 G C scaffold3789 ScafM SNP 0039.scaffold00152 977273 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 977311 1 C A scaffold3789 ScafM INDEL 0039.scaffold00152 977317 34 CGCAGAATGCAAAGTACTACAATTCACGTTCCCG .................................. scaffold3789 ScafM SNP 0039.scaffold00152 977377 1 A G scaffold3789 ScafM SNP 0039.scaffold00152 977379 1 C G scaffold3789 ScafM SNP 0039.scaffold00152 977398 1 T C scaffold3789 ScafM SNP 0039.scaffold00152 977450 1 T C scaffold3789 ReadM SNP 0039.scaffold00152 978142 1 C G - ReadM SNP 0039.scaffold00152 978147 1 C T - ScafM INDEL 0040.scaffold00153 16780 1 . A scaffold7631 ScafM INDEL 0040.scaffold00153 16784 16 ................ AAAAAAAAAAACCCAA scaffold7631 ReadM SNP 0040.scaffold00153 18523 1 A T - Both SNP 0040.scaffold00153 21271 1 T C scaffold7631 Both SNP 0040.scaffold00153 33640 1 C A scaffold7631 ScafM SNP 0040.scaffold00153 34504 1 A T scaffold7631 ReadM INDEL 0040.scaffold00153 36306 1 T . - Both SNP 0041.scaffold00154 610 1 G A scaffold884 Both SNP 0041.scaffold00154 772 1 C T scaffold884 ReadM SNP 0041.scaffold00154 908 1 C T - ReadM SNP 0041.scaffold00154 940 1 G T - Both SNP 0041.scaffold00154 1000 1 T G scaffold884 Both SNP 0041.scaffold00154 1010 1 G A scaffold884 Both SNP 0041.scaffold00154 1017 1 T G scaffold884 ReadM SNP 0041.scaffold00154 1153 1 T C - ReadM SNP 0041.scaffold00154 1435 1 C T - ReadM SNP 0041.scaffold00154 1438 1 C T - ReadM SNP 0041.scaffold00154 3574 1 C T - ReadM SNP 0041.scaffold00154 3595 1 G A - ScafM SNP 0041.scaffold00154 3789 1 A T scaffold884 Both SNP 0041.scaffold00154 3879 1 A G scaffold884 ScafM INDEL 0041.scaffold00154 3991 1 . T scaffold884 ReadM SNP 0041.scaffold00154 6909 1 A G - ScafM SNP 0041.scaffold00154 9079 1 A G scaffold884 ScafM INDEL 0041.scaffold00154 9170 2 AA .. scaffold884 ReadM INDEL 0041.scaffold00154 9547 2 AA .. - ReadM SNP 0041.scaffold00154 9667 1 A G - ReadM INDEL 0041.scaffold00154 9750 1 . C - ReadM SNP 0041.scaffold00154 9761 1 A G - ScafM SNP 0041.scaffold00154 9848 1 A T scaffold884 ReadM SNP 0041.scaffold00154 9990 1 T G - ScafM INDEL 0041.scaffold00154 10267 2 .. TT scaffold884 Both SNP 0041.scaffold00154 10630 1 A T scaffold884 ScafM SNP 0041.scaffold00154 10994 1 A G scaffold884 Both INDEL 0041.scaffold00154 11164 2 .. TT scaffold884 ScafM SNP 0041.scaffold00154 11166 1 A T scaffold884 Both SNP 0041.scaffold00154 11702 1 T C scaffold884 ReadM SNP 0041.scaffold00154 11966 1 G A - Both SNP 0041.scaffold00154 12087 1 C A scaffold884 Both SNP 0041.scaffold00154 12158 1 A T scaffold884 ReadM SNP 0041.scaffold00154 13273 1 A G - ReadM SNP 0041.scaffold00154 13407 1 A G - Both INDEL 0041.scaffold00154 14442 1 T . scaffold884 ScafM SNP 0041.scaffold00154 14483 1 T C scaffold884 ScafM SNP 0041.scaffold00154 14488 1 G T scaffold884 ScafM INDEL 0041.scaffold00154 14577 30 ATTTATCTTTTTTTTCCCCCACTACTGGTA .............................. scaffold884 ScafM SNP 0041.scaffold00154 14622 1 G A scaffold884 Both SNP 0041.scaffold00154 14664 1 T C scaffold884 Both SNP 0041.scaffold00154 14917 1 A G scaffold884 Both SNP 0041.scaffold00154 15065 1 G C scaffold884 ScafM SNP 0041.scaffold00154 15840 1 A T scaffold884 Both SNP 0041.scaffold00154 15884 1 A G scaffold884 Both INDEL 0041.scaffold00154 16337 1 . T scaffold884 Both SNP 0041.scaffold00154 16879 1 G A scaffold884 ScafM SNP 0041.scaffold00154 17404 2 AT GG scaffold884 Both SNP 0041.scaffold00154 17643 1 A G scaffold884 ReadM SNP 0041.scaffold00154 18134 1 G A - ReadM INDEL 0041.scaffold00154 18246 1 C . - Both SNP 0041.scaffold00154 18620 1 T G scaffold884 Both SNP 0041.scaffold00154 19292 1 A G scaffold884 ScafM INDEL 0041.scaffold00154 19317 2 TT .. scaffold884 Both SNP 0041.scaffold00154 20024 1 T C scaffold884 Both SNP 0041.scaffold00154 20064 1 C G scaffold884 ReadM SNP 0041.scaffold00154 20729 1 T G - Both SNP 0041.scaffold00154 21389 1 G A scaffold884 Both SNP 0041.scaffold00154 21438 1 T C scaffold884 Both SNP 0041.scaffold00154 21511 1 G T scaffold884 Both SNP 0041.scaffold00154 21948 1 C G scaffold884 ScafM SNP 0041.scaffold00154 22344 1 T G scaffold884 Both SNP 0041.scaffold00154 22383 1 A G scaffold884 Both SNP 0041.scaffold00154 23624 1 T C scaffold884 Both SNP 0041.scaffold00154 23849 1 T C scaffold884 Both SNP 0041.scaffold00154 23869 1 C T scaffold884 Both SNP 0041.scaffold00154 23988 1 T A scaffold884 Both SNP 0041.scaffold00154 24201 1 A T scaffold884 ReadM SNP 0041.scaffold00154 24290 1 A G - ReadM SNP 0041.scaffold00154 24297 1 G A - ReadM SNP 0041.scaffold00154 24323 1 A T - ReadM INDEL 0041.scaffold00154 25550 1 A . - ReadM SNP 0041.scaffold00154 25567 1 C A - ScafM SNP 0041.scaffold00154 28426 1 T G scaffold884 Both SNP 0041.scaffold00154 28843 1 C T scaffold884 ReadM SNP 0041.scaffold00154 29270 1 T C - ReadM SNP 0041.scaffold00154 30450 1 T C - ReadM SNP 0041.scaffold00154 30691 1 G A - ScafM SNP 0041.scaffold00154 30743 1 C T scaffold14915 ScafM SNP 0041.scaffold00154 30746 1 A G scaffold14915 ScafM INDEL 0041.scaffold00154 30766 1 . A scaffold14915 ScafM SNP 0041.scaffold00154 30774 1 C T scaffold14915 Both SNP 0041.scaffold00154 30792 1 G A scaffold14915 ScafM SNP 0041.scaffold00154 30811 1 C T scaffold14915 ScafM SNP 0041.scaffold00154 30873 1 G C scaffold14915 ScafM SNP 0041.scaffold00154 30945 1 C T scaffold14915 ScafM SNP 0041.scaffold00154 30990 1 A G scaffold14915 ScafM SNP 0041.scaffold00154 30998 2 GA AG scaffold14915 ScafM SNP 0041.scaffold00154 31024 1 A C scaffold14915 ScafM SNP 0041.scaffold00154 31031 2 TG CA scaffold14915 ScafM SNP 0041.scaffold00154 31056 1 G T scaffold14915 ScafM SNP 0041.scaffold00154 31071 1 T G scaffold14915 ScafM SNP 0041.scaffold00154 31177 1 A G scaffold14915 ScafM SNP 0041.scaffold00154 31230 1 A G scaffold14915 ScafM SNP 0041.scaffold00154 31240 1 A G scaffold14915 ScafM SNP 0041.scaffold00154 31254 1 C G scaffold14915 ScafM SNP 0041.scaffold00154 31287 1 T G scaffold14915 ScafM SNP 0041.scaffold00154 31306 1 G A scaffold14915 ScafM SNP 0041.scaffold00154 31358 1 C A scaffold14915 ScafM SNP 0041.scaffold00154 31423 1 G A scaffold14915 ScafM SNP 0041.scaffold00154 31438 1 C T scaffold14915 ReadM SNP 0041.scaffold00154 31772 1 A C - ReadM SNP 0041.scaffold00154 31901 1 T G - ReadM SNP 0041.scaffold00154 32613 1 T C - ReadM SNP 0041.scaffold00154 32794 1 C G - ReadM SNP 0041.scaffold00154 33233 1 T C - ReadM SNP 0041.scaffold00154 33294 1 C T - ReadM INDEL 0041.scaffold00154 36495 1 A . - ReadM SNP 0041.scaffold00154 37050 1 G A - ScafM SNP 0041.scaffold00154 37183 1 C T scaffold10173 ReadM SNP 0041.scaffold00154 37401 1 G T - ReadM SNP 0041.scaffold00154 37430 1 G A - ReadM SNP 0041.scaffold00154 37478 1 G T - ReadM SNP 0041.scaffold00154 37559 1 T G - ReadM SNP 0041.scaffold00154 37708 1 A C - ScafM SNP 0041.scaffold00154 38717 1 T C scaffold10173 ScafM SNP 0041.scaffold00154 38764 1 C G scaffold10173 ScafM SNP 0041.scaffold00154 38786 1 T C scaffold10173 ScafM SNP 0041.scaffold00154 38853 1 T A scaffold10173 ScafM INDEL 0041.scaffold00154 39017 1 . T scaffold10173 ReadM SNP 0041.scaffold00154 39986 1 A T - ReadM SNP 0041.scaffold00154 40688 1 A C - ReadM SNP 0041.scaffold00154 40835 1 C T - ReadM SNP 0041.scaffold00154 41214 1 C T - ReadM SNP 0041.scaffold00154 41384 1 C T - ReadM SNP 0041.scaffold00154 41982 1 A G - ReadM SNP 0041.scaffold00154 42108 1 C A - ReadM SNP 0041.scaffold00154 42282 1 G A - ReadM SNP 0041.scaffold00154 42687 1 G C - ReadM SNP 0041.scaffold00154 43252 1 T C - ReadM SNP 0041.scaffold00154 44102 1 A T - ReadM SNP 0041.scaffold00154 44584 1 T C - ReadM SNP 0041.scaffold00154 44798 1 A G - ReadM SNP 0041.scaffold00154 45383 1 A G - ReadM SNP 0041.scaffold00154 45440 1 C A - ReadM SNP 0041.scaffold00154 45551 1 C G - ReadM SNP 0041.scaffold00154 46324 1 A G - ReadM SNP 0041.scaffold00154 46725 1 G A - Both SNP 0041.scaffold00154 47043 1 C T scaffold10173 ScafM SNP 0041.scaffold00154 47207 1 C A scaffold10173 ScafM SNP 0041.scaffold00154 47230 1 G A scaffold10173 Both SNP 0041.scaffold00154 47419 1 T C scaffold10173 Both SNP 0041.scaffold00154 47692 1 A T scaffold10173 Both SNP 0041.scaffold00154 47749 1 G A scaffold10173 ScafM SNP 0041.scaffold00154 48002 1 C A scaffold10173 ScafM SNP 0041.scaffold00154 48004 2 AC GG scaffold10173 ReadM SNP 0041.scaffold00154 48809 1 C A - ReadM SNP 0041.scaffold00154 48856 1 T A - ScafM SNP 0041.scaffold00154 49573 1 A C scaffold10173 ScafM INDEL 0041.scaffold00154 49633 1 . C scaffold10173 ScafM SNP 0041.scaffold00154 49653 1 A G scaffold10173 ReadM SNP 0041.scaffold00154 49672 1 A C - ScafM SNP 0041.scaffold00154 49674 1 A G scaffold10173 ScafM SNP 0041.scaffold00154 49679 1 G T scaffold10173 ScafM SNP 0041.scaffold00154 49731 1 C T scaffold10173 ScafM SNP 0041.scaffold00154 49835 1 C T scaffold10173 Both SNP 0041.scaffold00154 50163 1 G A scaffold10173 ScafM SNP 0041.scaffold00154 50174 1 A T scaffold10173 ReadM SNP 0041.scaffold00154 50410 1 C T - ScafM SNP 0041.scaffold00154 50478 1 C T scaffold10173 Both SNP 0041.scaffold00154 50577 1 C T scaffold10173 Both SNP 0041.scaffold00154 50678 1 G C scaffold10173 Both INDEL 0041.scaffold00154 50686 1 . G scaffold10173 ScafM SNP 0041.scaffold00154 50862 1 C A scaffold10173 ScafM SNP 0041.scaffold00154 51018 1 G T scaffold10173 Both SNP 0041.scaffold00154 51095 1 A G scaffold10173 Both SNP 0041.scaffold00154 51113 1 G A scaffold10173 Both SNP 0041.scaffold00154 51119 1 T C scaffold10173 Both SNP 0041.scaffold00154 51230 1 C T scaffold10173 Both SNP 0041.scaffold00154 51444 1 A G scaffold10173 Both SNP 0041.scaffold00154 51449 1 A G scaffold10173 Both SNP 0041.scaffold00154 51689 1 A G scaffold10173 Both SNP 0041.scaffold00154 51769 1 G C scaffold10173 ReadM SNP 0041.scaffold00154 52567 1 A G - ReadM SNP 0041.scaffold00154 52619 1 G A - ReadM SNP 0041.scaffold00154 52628 1 G C - ReadM SNP 0041.scaffold00154 54067 1 C G - ReadM SNP 0041.scaffold00154 54898 1 G A - Both SNP 0041.scaffold00154 55975 1 A C scaffold29404 ScafM SNP 0041.scaffold00154 56101 1 G A scaffold29404 ScafM SNP 0041.scaffold00154 56133 1 C T scaffold29404 ScafM SNP 0041.scaffold00154 57483 1 G A scaffold29320 ScafM SNP 0041.scaffold00154 57491 1 A G scaffold29320 ScafM SNP 0041.scaffold00154 59591 1 A G scaffold2268 ScafM SNP 0041.scaffold00154 59637 1 C T scaffold2268 ScafM INDEL 0041.scaffold00154 59647 2 .. AT scaffold2268 ScafM SNP 0041.scaffold00154 59671 1 A G scaffold2268 ScafM SNP 0041.scaffold00154 59674 2 TA CC scaffold2268 ScafM SNP 0041.scaffold00154 59691 1 A T scaffold2268 ScafM INDEL 0041.scaffold00154 59723 3 ... TTT scaffold2268 ReadM SNP 0041.scaffold00154 59919 1 C T - ReadM SNP 0041.scaffold00154 61852 1 T G - ReadM SNP 0041.scaffold00154 62914 1 C T - ReadM SNP 0041.scaffold00154 62961 1 T G - ReadM SNP 0041.scaffold00154 63029 1 T C - ReadM SNP 0041.scaffold00154 63112 1 G A - ReadM SNP 0041.scaffold00154 63376 1 T C - ReadM SNP 0041.scaffold00154 63587 1 C T - ReadM SNP 0041.scaffold00154 64030 1 A G - ReadM SNP 0041.scaffold00154 64149 1 T C - ReadM SNP 0041.scaffold00154 64427 1 C T - ReadM SNP 0041.scaffold00154 64442 1 G A - ReadM SNP 0041.scaffold00154 64661 1 T C - ReadM SNP 0041.scaffold00154 67086 1 C T - ReadM SNP 0041.scaffold00154 67171 1 T G - ReadM SNP 0041.scaffold00154 67178 1 C T - Both SNP 0041.scaffold00154 67404 1 C T scaffold43399 ReadM SNP 0041.scaffold00154 67477 1 T C - ReadM INDEL 0041.scaffold00154 67705 3 ... CAC - ScafM INDEL 0041.scaffold00154 67818 5 CGTAG ..... scaffold43399 ReadM SNP 0041.scaffold00154 73893 1 G A - ReadM SNP 0041.scaffold00154 73927 1 A G - ReadM SNP 0041.scaffold00154 73997 1 T G - ReadM INDEL 0041.scaffold00154 74074 1 G . - ScafM SNP 0041.scaffold00154 74147 1 T C scaffold2000 ScafM SNP 0041.scaffold00154 74154 1 A G scaffold2000 ScafM SNP 0041.scaffold00154 74167 1 A C scaffold2000 ScafM SNP 0041.scaffold00154 74175 1 A C scaffold2000 ScafM SNP 0041.scaffold00154 74182 1 T C scaffold2000 ScafM SNP 0041.scaffold00154 74196 1 T C scaffold2000 ScafM SNP 0041.scaffold00154 74212 1 A C scaffold2000 ScafM SNP 0041.scaffold00154 74221 1 A G scaffold2000 ScafM INDEL 0041.scaffold00154 74263 2 CT .G scaffold2000 ScafM INDEL 0041.scaffold00154 74284 1 A . scaffold2000 ScafM INDEL 0041.scaffold00154 74286 1 C . scaffold2000 ScafM SNP 0041.scaffold00154 74304 1 C T scaffold2000 ScafM SNP 0041.scaffold00154 74314 2 AT TG scaffold2000 ScafM SNP 0041.scaffold00154 74328 1 C G scaffold2000 ScafM SNP 0041.scaffold00154 74354 1 T A scaffold2000 ScafM SNP 0041.scaffold00154 74406 1 A G scaffold2000 ScafM SNP 0041.scaffold00154 74415 1 G A scaffold2000 ScafM SNP 0041.scaffold00154 74436 1 A G scaffold2000 ScafM SNP 0041.scaffold00154 74583 2 TT AA scaffold33318 ScafM INDEL 0041.scaffold00154 74631 2 .. TT scaffold33318 ScafM SNP 0041.scaffold00154 74633 1 G T scaffold33318 ScafM INDEL 0041.scaffold00154 87025 1 A . scaffold33318 ScafM SNP 0041.scaffold00154 87031 1 G T scaffold33318 ScafM SNP 0041.scaffold00154 87040 1 A G scaffold33318 ScafM SNP 0041.scaffold00154 87094 1 T G scaffold33318 ScafM SNP 0041.scaffold00154 87249 1 C T scaffold33318 ScafM SNP 0041.scaffold00154 87410 1 A G scaffold33318 Both SNP 0041.scaffold00154 87560 1 T C scaffold33318 ReadM SNP 0041.scaffold00154 87645 1 G A - ReadM SNP 0041.scaffold00154 89052 1 A C - ReadM SNP 0041.scaffold00154 89806 1 A G - ScafM SNP 0041.scaffold00154 104958 1 T C scaffold25678 ScafM SNP 0041.scaffold00154 104995 1 T C scaffold25678 ScafM INDEL 0041.scaffold00154 105053 8 AATTTGTA ........ scaffold25678 ScafM INDEL 0041.scaffold00154 105146 1 . T scaffold25678 ScafM SNP 0041.scaffold00154 105295 1 T C scaffold25678 ScafM SNP 0041.scaffold00154 105702 1 C T scaffold6103 ScafM SNP 0041.scaffold00154 107692 1 T A scaffold10555 ScafM SNP 0041.scaffold00154 107717 1 A G scaffold10555 ScafM SNP 0041.scaffold00154 107735 3 ATT TGA scaffold10555 ScafM SNP 0041.scaffold00154 107774 1 G A scaffold10555 ScafM SNP 0041.scaffold00154 107777 1 T C scaffold10555 ScafM SNP 0041.scaffold00154 107798 1 G T scaffold10555 ScafM SNP 0041.scaffold00154 107823 1 G A scaffold10555 ScafM SNP 0041.scaffold00154 107832 1 A T scaffold10555 ScafM SNP 0041.scaffold00154 107847 1 T C scaffold10555 ScafM INDEL 0041.scaffold00154 107849 1 C . scaffold10555 ScafM SNP 0041.scaffold00154 107851 1 C A scaffold10555 ScafM SNP 0041.scaffold00154 107866 1 A G scaffold10555 ScafM SNP 0041.scaffold00154 107870 1 C T scaffold10555 ReadM SNP 0041.scaffold00154 108253 1 C T - ReadM SNP 0041.scaffold00154 108899 1 A T - ReadM SNP 0041.scaffold00154 109648 1 C T - ReadM SNP 0041.scaffold00154 110166 1 T C - ReadM SNP 0041.scaffold00154 110204 1 T A - ReadM SNP 0041.scaffold00154 110663 1 G A - ReadM SNP 0041.scaffold00154 111052 1 G A - ReadM SNP 0041.scaffold00154 111364 1 G T - ReadM SNP 0041.scaffold00154 111445 1 T C - ReadM SNP 0041.scaffold00154 111482 1 G A - ReadM SNP 0041.scaffold00154 111772 1 G T - ReadM SNP 0041.scaffold00154 111908 1 T C - ReadM SNP 0041.scaffold00154 112048 1 T A - ReadM SNP 0041.scaffold00154 112094 1 T A - ReadM SNP 0041.scaffold00154 112327 1 C T - ReadM SNP 0041.scaffold00154 112408 1 G A - ReadM SNP 0041.scaffold00154 112426 1 C T - ReadM SNP 0041.scaffold00154 112445 1 A G - ReadM SNP 0041.scaffold00154 112528 1 G A - ReadM SNP 0041.scaffold00154 112539 1 T G - ReadM SNP 0041.scaffold00154 112833 1 A C - ReadM SNP 0041.scaffold00154 114113 1 C G - ScafM SNP 0041.scaffold00154 114640 1 A G scaffold4488 ScafM SNP 0041.scaffold00154 114644 1 T C scaffold4488 ScafM SNP 0041.scaffold00154 114652 1 T C scaffold4488 ScafM SNP 0041.scaffold00154 114701 1 C T scaffold4488 ReadM SNP 0041.scaffold00154 114717 1 G C - ReadM SNP 0041.scaffold00154 116635 1 A G - ReadM SNP 0041.scaffold00154 116706 1 T C - ReadM SNP 0041.scaffold00154 116849 1 C G - ReadM SNP 0041.scaffold00154 117156 1 A C - ReadM SNP 0041.scaffold00154 117708 1 C G - ReadM SNP 0041.scaffold00154 118553 1 A G - ReadM SNP 0041.scaffold00154 119117 1 C A - ReadM SNP 0041.scaffold00154 120772 1 T C - ReadM SNP 0041.scaffold00154 120782 1 T G - ReadM SNP 0041.scaffold00154 120955 1 T C - ReadM SNP 0041.scaffold00154 120962 1 A T - ReadM INDEL 0041.scaffold00154 121011 1 . T - ReadM SNP 0041.scaffold00154 121035 1 G T - ReadM SNP 0041.scaffold00154 121078 1 T G - ReadM SNP 0041.scaffold00154 121125 1 G T - ReadM SNP 0041.scaffold00154 121305 1 C T - ReadM SNP 0041.scaffold00154 121696 1 T A - ReadM INDEL 0041.scaffold00154 122028 1 . A - ReadM SNP 0041.scaffold00154 122068 1 T C - ReadM SNP 0041.scaffold00154 122093 1 T C - ReadM INDEL 0041.scaffold00154 122155 1 C . - ReadM SNP 0041.scaffold00154 122360 1 C G - ReadM SNP 0041.scaffold00154 123206 1 A G - ReadM SNP 0041.scaffold00154 123305 1 G C - ReadM SNP 0041.scaffold00154 123315 1 T G - ReadM SNP 0041.scaffold00154 123416 1 G A - ReadM SNP 0041.scaffold00154 123480 1 A T - ReadM INDEL 0041.scaffold00154 124023 1 A . - ReadM INDEL 0041.scaffold00154 124647 1 T . - ReadM SNP 0041.scaffold00154 124845 1 T C - ReadM SNP 0041.scaffold00154 125049 1 A G - ReadM SNP 0041.scaffold00154 125423 1 G A - ReadM SNP 0041.scaffold00154 126403 1 A G - ReadM SNP 0041.scaffold00154 126520 1 C T - ReadM SNP 0041.scaffold00154 126763 1 A G - ReadM SNP 0041.scaffold00154 127455 1 T C - ReadM SNP 0041.scaffold00154 127545 1 A G - ReadM SNP 0041.scaffold00154 128139 1 C T - ReadM SNP 0041.scaffold00154 128218 1 C T - ReadM SNP 0041.scaffold00154 128238 1 G T - ReadM SNP 0041.scaffold00154 128793 1 G A - ReadM SNP 0041.scaffold00154 129123 1 C A - ReadM SNP 0041.scaffold00154 129135 1 A G - ReadM SNP 0041.scaffold00154 129147 1 G T - ReadM SNP 0041.scaffold00154 129303 1 G A - ReadM SNP 0041.scaffold00154 129864 1 G C - ReadM SNP 0041.scaffold00154 129936 1 A G - ScafM SNP 0041.scaffold00154 130242 1 G T scaffold24389 Both INDEL 0041.scaffold00154 130841 1 A . scaffold24389 ScafM SNP 0041.scaffold00154 130962 1 T C scaffold24389 ScafM SNP 0041.scaffold00154 130986 1 T C scaffold24389 ScafM SNP 0041.scaffold00154 131001 1 T C scaffold24389 ScafM SNP 0041.scaffold00154 131126 1 A T scaffold24389 ScafM SNP 0041.scaffold00154 131153 1 C T scaffold24389 ScafM INDEL 0041.scaffold00154 131212 1 . A scaffold24389 ScafM SNP 0041.scaffold00154 134243 1 C T scaffold31010 ScafM INDEL 0041.scaffold00154 134363 1 . A scaffold31010 ScafM SNP 0041.scaffold00154 134450 1 C T scaffold31010 ScafM SNP 0041.scaffold00154 134454 1 C G scaffold31010 ScafM SNP 0041.scaffold00154 134515 1 T C scaffold31010 ScafM SNP 0041.scaffold00154 134553 1 G A scaffold31010 Both SNP 0041.scaffold00154 134867 1 G A scaffold31010 Both SNP 0041.scaffold00154 134907 1 A G scaffold31010 Both SNP 0041.scaffold00154 134916 1 C A scaffold31010 ReadM SNP 0041.scaffold00154 134999 1 A T - ReadM INDEL 0041.scaffold00154 135152 1 . A - ReadM SNP 0041.scaffold00154 135198 1 A G - ReadM SNP 0041.scaffold00154 135225 1 C T - ReadM SNP 0041.scaffold00154 135277 1 C T - ReadM SNP 0041.scaffold00154 139744 1 A G - ReadM INDEL 0041.scaffold00154 139838 1 . A - Both SNP 0041.scaffold00154 140290 1 C A scaffold18069 Both SNP 0041.scaffold00154 140325 1 G A scaffold18069 ScafM SNP 0041.scaffold00154 140522 1 G A scaffold18069 ScafM SNP 0041.scaffold00154 140621 1 T G scaffold18069 ScafM SNP 0041.scaffold00154 140766 2 TT CA scaffold18069 ScafM SNP 0041.scaffold00154 140783 1 A G scaffold18069 ScafM SNP 0041.scaffold00154 140888 1 A G scaffold18069 ReadM SNP 0041.scaffold00154 157392 1 T G - ReadM SNP 0041.scaffold00154 157417 1 T C - ReadM SNP 0041.scaffold00154 157428 1 G T - ReadM SNP 0041.scaffold00154 157433 1 C T - ReadM SNP 0041.scaffold00154 157567 1 C T - ReadM SNP 0041.scaffold00154 157886 1 C T - ReadM SNP 0041.scaffold00154 157985 1 G A - ReadM SNP 0041.scaffold00154 158487 1 T C - ReadM SNP 0041.scaffold00154 158673 1 G A - ReadM SNP 0041.scaffold00154 158703 1 G A - Both SNP 0041.scaffold00154 158966 1 C T scaffold15488 Both SNP 0041.scaffold00154 159737 1 T C scaffold15488 ReadM SNP 0041.scaffold00154 159922 1 A T - ReadM SNP 0041.scaffold00154 160007 1 G A - ReadM SNP 0041.scaffold00154 160036 1 C A - ReadM SNP 0041.scaffold00154 160079 1 C T - ReadM SNP 0041.scaffold00154 160181 1 G A - Both SNP 0041.scaffold00154 160310 1 C G scaffold15488 ScafM SNP 0041.scaffold00154 160395 1 T C scaffold15488 Both SNP 0041.scaffold00154 160451 1 C A scaffold15488 ReadM SNP 0041.scaffold00154 161803 1 T C - ReadM SNP 0041.scaffold00154 161945 1 A C - Both SNP 0041.scaffold00154 162004 1 A G scaffold15488 ScafM SNP 0041.scaffold00154 162081 1 C T scaffold15488 ScafM SNP 0041.scaffold00154 162120 1 A G scaffold15488 ReadM INDEL 0041.scaffold00154 162789 1 . T - ReadM SNP 0041.scaffold00154 162942 1 A G - ReadM SNP 0041.scaffold00154 163065 1 G A - ReadM SNP 0041.scaffold00154 163155 1 G A - ReadM SNP 0041.scaffold00154 163181 1 G A - ReadM INDEL 0041.scaffold00154 163511 1 C . - ReadM SNP 0041.scaffold00154 163799 1 T G - ReadM SNP 0041.scaffold00154 163968 1 C T - ReadM SNP 0041.scaffold00154 164465 1 T A - ReadM SNP 0041.scaffold00154 164775 1 C A - ReadM SNP 0041.scaffold00154 164936 1 A G - ReadM SNP 0041.scaffold00154 165066 1 G A - ReadM SNP 0041.scaffold00154 165080 1 A T - ReadM SNP 0041.scaffold00154 165416 1 T A - ReadM SNP 0041.scaffold00154 165708 1 T A - ReadM SNP 0041.scaffold00154 165781 1 A G - ReadM SNP 0041.scaffold00154 165827 1 T C - ReadM SNP 0041.scaffold00154 165844 1 A G - ReadM SNP 0041.scaffold00154 165993 1 A G - Both SNP 0041.scaffold00154 166144 1 A C scaffold16839 Both SNP 0041.scaffold00154 166313 1 T C scaffold16839 Both SNP 0041.scaffold00154 166388 1 A G scaffold16839 Both SNP 0041.scaffold00154 166420 1 A G scaffold16839 Both SNP 0041.scaffold00154 166512 1 A G scaffold16839 ScafM SNP 0041.scaffold00154 166857 1 T C scaffold16839 ScafM SNP 0041.scaffold00154 166931 1 T C scaffold16839 Both SNP 0041.scaffold00154 167120 1 T C scaffold16839 ReadM SNP 0041.scaffold00154 167659 1 T A - ReadM SNP 0041.scaffold00154 167701 1 G T - ReadM SNP 0041.scaffold00154 168112 1 C T - ReadM SNP 0041.scaffold00154 168494 1 G A - ReadM SNP 0041.scaffold00154 168696 1 T C - ReadM SNP 0041.scaffold00154 169020 1 G A - ReadM SNP 0041.scaffold00154 169082 1 G A - ReadM SNP 0041.scaffold00154 171615 1 T C - ReadM SNP 0041.scaffold00154 171775 1 T A - ReadM SNP 0041.scaffold00154 172305 1 T C - ReadM SNP 0041.scaffold00154 172588 1 T G - ReadM SNP 0041.scaffold00154 175337 1 A G - ReadM SNP 0041.scaffold00154 176349 1 C T - ReadM SNP 0041.scaffold00154 176687 1 G T - ReadM INDEL 0041.scaffold00154 176858 1 . C - ReadM SNP 0041.scaffold00154 176908 1 T C - ReadM SNP 0041.scaffold00154 178239 1 T C - ReadM SNP 0041.scaffold00154 178714 1 A T - ReadM SNP 0041.scaffold00154 179996 1 C T - ReadM SNP 0041.scaffold00154 182469 1 A G - ReadM SNP 0041.scaffold00154 182654 1 T A - ReadM SNP 0041.scaffold00154 182690 1 C G - ReadM SNP 0041.scaffold00154 182696 1 T C - ReadM SNP 0041.scaffold00154 182791 1 T C - ReadM SNP 0041.scaffold00154 182843 1 A G - ReadM SNP 0041.scaffold00154 182873 1 G A - ReadM SNP 0041.scaffold00154 183336 1 T G - ScafM SNP 0041.scaffold00154 183806 1 A G scaffold11712 Both SNP 0041.scaffold00154 183920 1 C T scaffold11712 Both SNP 0041.scaffold00154 184025 1 G A scaffold11712 ReadM SNP 0041.scaffold00154 184223 1 C T - ReadM SNP 0041.scaffold00154 184232 1 G A - ScafM SNP 0041.scaffold00154 184504 1 C T scaffold11712 Both SNP 0041.scaffold00154 184607 1 A G scaffold11712 Both SNP 0041.scaffold00154 184670 1 C A scaffold11712 Both SNP 0041.scaffold00154 184721 1 C T scaffold11712 ScafM SNP 0041.scaffold00154 184769 1 C T scaffold11712 ScafM SNP 0041.scaffold00154 184772 1 C T scaffold11712 ScafM SNP 0041.scaffold00154 184774 1 A G scaffold11712 Both SNP 0041.scaffold00154 184823 1 C T scaffold11712 ReadM SNP 0041.scaffold00154 184988 1 C T - ReadM SNP 0041.scaffold00154 185039 1 G A - ReadM SNP 0041.scaffold00154 185109 1 T C - ReadM SNP 0041.scaffold00154 185129 1 T A - ReadM SNP 0041.scaffold00154 185255 1 T G - ReadM SNP 0041.scaffold00154 185363 1 C A - ReadM SNP 0041.scaffold00154 185459 1 T A - ReadM SNP 0041.scaffold00154 185762 1 T A - ReadM SNP 0041.scaffold00154 185924 1 T C - ReadM SNP 0041.scaffold00154 186095 1 C T - Both SNP 0041.scaffold00154 187459 1 C T scaffold25610 Both INDEL 0041.scaffold00154 187507 1 . T scaffold25610 ScafM SNP 0041.scaffold00154 187683 1 A G scaffold25610 ScafM INDEL 0041.scaffold00154 187858 1 . T scaffold25610 ScafM SNP 0041.scaffold00154 187883 1 A G scaffold25610 ScafM INDEL 0041.scaffold00154 188455 1 . A scaffold25610 ScafM INDEL 0041.scaffold00154 189852 1 A . scaffold6103 ScafM INDEL 0041.scaffold00154 189941 8 ........ AATTTACA scaffold6103 ReadM SNP 0041.scaffold00154 190119 1 G T - ReadM SNP 0041.scaffold00154 190248 1 T C - ReadM SNP 0041.scaffold00154 190614 1 T C - ReadM SNP 0041.scaffold00154 190826 1 G C - ReadM SNP 0041.scaffold00154 191671 1 G A - ReadM SNP 0041.scaffold00154 192628 1 C T - ReadM SNP 0041.scaffold00154 192944 1 T C - ReadM SNP 0041.scaffold00154 193071 1 A G - ReadM SNP 0041.scaffold00154 193256 1 A T - ReadM SNP 0041.scaffold00154 193347 1 G A - ReadM SNP 0041.scaffold00154 194200 1 T C - ReadM SNP 0041.scaffold00154 195729 1 G T - ReadM INDEL 0041.scaffold00154 195876 1 . G - ReadM SNP 0041.scaffold00154 195882 1 A G - ReadM SNP 0041.scaffold00154 197201 1 A G - ReadM INDEL 0041.scaffold00154 197283 1 . T - ReadM SNP 0041.scaffold00154 197521 1 G A - ReadM SNP 0041.scaffold00154 197625 1 C A - ReadM SNP 0041.scaffold00154 198169 1 A G - Both SNP 0041.scaffold00154 198220 1 G T scaffold19237 ReadM SNP 0041.scaffold00154 198449 1 G A - ReadM SNP 0041.scaffold00154 198655 1 T C - ReadM SNP 0041.scaffold00154 198957 1 T G - ReadM SNP 0041.scaffold00154 199249 1 G A - ReadM SNP 0041.scaffold00154 199800 1 A G - ScafM INDEL 0041.scaffold00154 200918 1 . T scaffold135 ScafM INDEL 0041.scaffold00154 200922 5 ..... CCTCA scaffold135 ScafM SNP 0041.scaffold00154 200924 1 C A scaffold135 ScafM SNP 0041.scaffold00154 200932 1 C T scaffold135 ScafM SNP 0041.scaffold00154 200936 2 TA CT scaffold135 ScafM SNP 0041.scaffold00154 200960 1 G A scaffold135 ScafM SNP 0041.scaffold00154 200974 1 A C scaffold135 ScafM INDEL 0041.scaffold00154 200979 2 TA .C scaffold135 ScafM INDEL 0041.scaffold00154 200999 1 C . scaffold135 ScafM SNP 0041.scaffold00154 201030 1 T A scaffold135 ScafM SNP 0041.scaffold00154 201034 1 G A scaffold135 ScafM SNP 0041.scaffold00154 201082 1 T C scaffold135 ScafM SNP 0041.scaffold00154 201134 1 C T scaffold135 ScafM INDEL 0041.scaffold00154 201138 6 TACTGT ...... scaffold135 ScafM INDEL 0041.scaffold00154 201175 1 T . scaffold135 ScafM SNP 0041.scaffold00154 201177 1 T A scaffold135 ScafM SNP 0041.scaffold00154 201201 1 T A scaffold135 ScafM SNP 0041.scaffold00154 201211 1 T C scaffold135 ScafM SNP 0041.scaffold00154 201238 1 G A scaffold135 ScafM SNP 0041.scaffold00154 201243 1 T G scaffold135 ScafM SNP 0041.scaffold00154 201246 1 G T scaffold135 ScafM SNP 0041.scaffold00154 201313 1 T G scaffold135 ScafM SNP 0041.scaffold00154 201366 1 C G scaffold135 ScafM SNP 0041.scaffold00154 201374 1 T C scaffold135 ScafM SNP 0041.scaffold00154 201385 1 T G scaffold135 ScafM SNP 0041.scaffold00154 201407 1 G A scaffold135 ScafM SNP 0041.scaffold00154 201411 1 A G scaffold135 ScafM SNP 0041.scaffold00154 201415 1 A G scaffold135 ScafM SNP 0041.scaffold00154 201467 1 A C scaffold135 ScafM SNP 0041.scaffold00154 201476 1 A G scaffold135 ScafM INDEL 0041.scaffold00154 201504 1 . T scaffold135 ScafM INDEL 0041.scaffold00154 201509 2 .T CA scaffold135 ScafM SNP 0041.scaffold00154 201515 1 T C scaffold135 ScafM SNP 0041.scaffold00154 201526 1 C T scaffold135 ScafM SNP 0041.scaffold00154 201601 1 G A scaffold135 ScafM INDEL 0041.scaffold00154 201618 2 TT .. scaffold135 ScafM SNP 0041.scaffold00154 210586 1 T C scaffold19237 ScafM SNP 0041.scaffold00154 210607 1 C T scaffold19237 Both SNP 0041.scaffold00154 210779 1 G A scaffold19237 ReadM SNP 0041.scaffold00154 210836 1 C T - ReadM SNP 0041.scaffold00154 210858 1 G A - ReadM SNP 0041.scaffold00154 210971 1 C T - ScafM SNP 0041.scaffold00154 211250 1 G A scaffold19237 ReadM SNP 0041.scaffold00154 212255 1 A G - ReadM SNP 0041.scaffold00154 212460 1 T A - ScafM SNP 0041.scaffold00154 213229 1 C A scaffold19237 Both SNP 0041.scaffold00154 213588 1 G A scaffold19237 Both SNP 0041.scaffold00154 213596 1 G A scaffold19237 ReadM INDEL 0041.scaffold00154 213700 1 . A - ScafM INDEL 0041.scaffold00154 213708 5 ..... AAAAA scaffold19237 ScafM SNP 0041.scaffold00154 213726 1 G A scaffold19237 Both SNP 0041.scaffold00154 213762 1 A T scaffold19237 Both INDEL 0041.scaffold00154 214012 1 T . scaffold19237 Both SNP 0041.scaffold00154 214495 1 T C scaffold19237 Both SNP 0041.scaffold00154 214534 1 T A scaffold19237 Both SNP 0041.scaffold00154 216933 1 T A scaffold19237 ScafM SNP 0041.scaffold00154 216946 1 T C scaffold19237 ScafM SNP 0041.scaffold00154 217071 1 T C scaffold19237 ScafM INDEL 0041.scaffold00154 217221 1 T . scaffold19237 ReadM INDEL 0041.scaffold00154 219194 1 . G - Both SNP 0041.scaffold00154 220982 1 G A scaffold36086 ScafM SNP 0041.scaffold00154 221109 1 T A scaffold36086 ScafM SNP 0041.scaffold00154 221112 1 T A scaffold36086 ScafM SNP 0041.scaffold00154 221170 1 T A scaffold36086 ScafM SNP 0041.scaffold00154 221199 2 CA TG scaffold36086 ReadM SNP 0041.scaffold00154 221396 1 T C - ReadM SNP 0041.scaffold00154 221469 1 T C - ReadM SNP 0041.scaffold00154 221541 1 T C - ReadM SNP 0041.scaffold00154 221553 1 A G - ScafM SNP 0041.scaffold00154 221860 1 A G scaffold101 ScafM SNP 0041.scaffold00154 221878 1 G A scaffold101 ReadM SNP 0041.scaffold00154 221891 1 G C - ScafM INDEL 0041.scaffold00154 221937 1 . G scaffold101 ScafM SNP 0041.scaffold00154 221965 1 A G scaffold101 ScafM SNP 0041.scaffold00154 221970 1 A G scaffold101 ReadM INDEL 0041.scaffold00154 222397 1 T . - ReadM SNP 0041.scaffold00154 222516 1 G A - Both INDEL 0041.scaffold00154 222941 3 ... AAT scaffold39851 ReadM SNP 0041.scaffold00154 223040 1 A G - ReadM SNP 0041.scaffold00154 223213 1 C A - Both SNP 0041.scaffold00154 223245 1 A T scaffold39851 ReadM SNP 0041.scaffold00154 224306 1 G T - ReadM SNP 0041.scaffold00154 224681 1 T G - ReadM SNP 0041.scaffold00154 225947 1 T A - ReadM INDEL 0041.scaffold00154 227727 1 A . - ReadM SNP 0041.scaffold00154 228271 1 T G - ReadM INDEL 0041.scaffold00154 228777 1 T . - ScafM SNP 0041.scaffold00154 230092 1 C A scaffold23016 ReadM SNP 0041.scaffold00154 230483 1 C T - ReadM SNP 0041.scaffold00154 230522 1 T A - ReadM SNP 0041.scaffold00154 230828 1 G A - ReadM SNP 0041.scaffold00154 230832 1 C T - ReadM SNP 0041.scaffold00154 230857 1 G A - ReadM SNP 0041.scaffold00154 230917 1 T C - Both SNP 0041.scaffold00154 231234 1 A T scaffold22410 ScafM SNP 0041.scaffold00154 231271 1 C T scaffold22410 ReadM SNP 0041.scaffold00154 232044 1 G A - ScafM SNP 0041.scaffold00154 233198 1 A G scaffold29404 ScafM SNP 0041.scaffold00154 233264 1 C A scaffold29404 ScafM SNP 0041.scaffold00154 233518 1 G T scaffold29404 ReadM SNP 0041.scaffold00154 235435 1 A C - ReadM SNP 0041.scaffold00154 238842 1 G A - ReadM SNP 0041.scaffold00154 238849 1 G T - Both SNP 0041.scaffold00154 239322 1 G T scaffold29546 Both SNP 0041.scaffold00154 239476 1 T C scaffold29546 Both SNP 0041.scaffold00154 239661 1 C T scaffold29546 ScafM INDEL 0041.scaffold00154 239733 8 GCCACTTA ........ scaffold29546 ScafM INDEL 0041.scaffold00154 239787 1 T . scaffold29546 ScafM SNP 0041.scaffold00154 239814 1 T A scaffold29546 ScafM INDEL 0041.scaffold00154 239846 1 T . scaffold29546 ScafM INDEL 0041.scaffold00154 239897 1 . C scaffold29546 Both SNP 0041.scaffold00154 240537 1 T A scaffold29546 Both SNP 0041.scaffold00154 240550 1 G A scaffold29546 Both SNP 0041.scaffold00154 240683 1 G A scaffold29546 ScafM SNP 0041.scaffold00154 240723 1 G A scaffold29546 Both SNP 0041.scaffold00154 240774 1 G A scaffold29546 ScafM INDEL 0041.scaffold00154 240869 1 . T scaffold29546 Both SNP 0041.scaffold00154 241165 1 A T scaffold29546 ReadM SNP 0041.scaffold00154 241523 1 C G - ReadM SNP 0041.scaffold00154 241584 1 A T - ScafM SNP 0041.scaffold00154 241679 1 T C scaffold29546 ScafM SNP 0041.scaffold00154 241684 1 C A scaffold29546 ScafM SNP 0041.scaffold00154 241789 2 TT CC scaffold29546 ScafM SNP 0041.scaffold00154 241857 1 G A scaffold29546 ScafM SNP 0041.scaffold00154 241865 1 C T scaffold29546 ScafM SNP 0041.scaffold00154 241898 1 A G scaffold29546 ScafM INDEL 0041.scaffold00154 241939 1 . T scaffold29546 ReadM SNP 0041.scaffold00154 246454 1 G A - ReadM INDEL 0041.scaffold00154 246465 1 T . - ReadM SNP 0041.scaffold00154 246593 1 T C - ReadM SNP 0041.scaffold00154 246632 1 A C - ReadM SNP 0041.scaffold00154 246847 1 A G - ReadM SNP 0041.scaffold00154 247078 1 A C - ReadM SNP 0041.scaffold00154 247354 1 T A - ReadM SNP 0041.scaffold00154 247606 1 C T - ReadM SNP 0041.scaffold00154 247871 1 G A - ReadM SNP 0041.scaffold00154 247910 1 G A - ReadM SNP 0041.scaffold00154 247991 1 T C - ReadM SNP 0041.scaffold00154 248153 1 A G - ReadM SNP 0041.scaffold00154 248155 1 T C - ReadM SNP 0041.scaffold00154 248180 1 T C - ReadM SNP 0041.scaffold00154 248264 1 G A - ReadM SNP 0041.scaffold00154 248720 1 A G - ReadM SNP 0041.scaffold00154 249434 1 T C - Both SNP 0041.scaffold00154 249852 1 A T scaffold10024 Both SNP 0041.scaffold00154 250515 1 A T scaffold10024 Both SNP 0041.scaffold00154 250711 1 T C scaffold10024 Both SNP 0041.scaffold00154 251027 1 G T scaffold10024 Both SNP 0041.scaffold00154 251231 1 T G scaffold10024 Both SNP 0041.scaffold00154 251607 1 T C scaffold10024 ScafM SNP 0041.scaffold00154 252109 1 A G scaffold10024 Both SNP 0041.scaffold00154 252172 1 T C scaffold10024 Both SNP 0041.scaffold00154 252483 1 A T scaffold10024 Both SNP 0041.scaffold00154 253154 1 C T scaffold10024 Both SNP 0041.scaffold00154 253229 1 A T scaffold10024 ScafM SNP 0041.scaffold00154 258194 1 T C scaffold5048 ScafM SNP 0041.scaffold00154 258211 1 A T scaffold5048 ScafM SNP 0041.scaffold00154 258229 1 T C scaffold5048 ScafM SNP 0041.scaffold00154 258255 1 G A scaffold5048 ScafM SNP 0041.scaffold00154 258268 1 A G scaffold5048 ScafM SNP 0041.scaffold00154 258276 1 T G scaffold5048 ScafM SNP 0041.scaffold00154 258283 1 T C scaffold5048 ScafM SNP 0041.scaffold00154 258292 1 G A scaffold5048 ScafM SNP 0041.scaffold00154 258295 1 A G scaffold5048 ScafM SNP 0041.scaffold00154 262510 1 T C scaffold4853 ScafM SNP 0041.scaffold00154 262644 1 A G scaffold4853 Both SNP 0041.scaffold00154 262861 1 T C scaffold4853 Both INDEL 0041.scaffold00154 263243 1 . A scaffold4853 Both INDEL 0041.scaffold00154 263468 1 A . scaffold4853 Both SNP 0041.scaffold00154 263904 1 G A scaffold4853 Both SNP 0041.scaffold00154 264191 1 A C scaffold4853 Both SNP 0041.scaffold00154 264521 1 T G scaffold4853 Both SNP 0041.scaffold00154 264654 1 G C scaffold4853 Both SNP 0041.scaffold00154 264828 1 A G scaffold4853 Both SNP 0041.scaffold00154 264943 1 C T scaffold4853 Both SNP 0041.scaffold00154 265015 1 T A scaffold4853 Both SNP 0041.scaffold00154 265136 1 G A scaffold4853 ReadM SNP 0041.scaffold00154 265923 1 A G - ReadM SNP 0041.scaffold00154 265963 1 G A - ReadM SNP 0041.scaffold00154 266279 1 C T - Both SNP 0041.scaffold00154 266426 1 G A scaffold4853 Both SNP 0041.scaffold00154 266519 1 A G scaffold4853 Both SNP 0041.scaffold00154 266708 1 A G scaffold4853 ReadM INDEL 0041.scaffold00154 266843 1 C . - ScafM INDEL 0041.scaffold00154 266843 2 CA .T scaffold4853 Both SNP 0041.scaffold00154 266870 1 A C scaffold4853 ReadM SNP 0041.scaffold00154 267099 1 G C - ReadM SNP 0041.scaffold00154 267109 1 A G - ReadM SNP 0041.scaffold00154 267390 1 A T - ReadM SNP 0041.scaffold00154 268035 1 C T - Both SNP 0041.scaffold00154 268267 1 A T scaffold4853 Both SNP 0041.scaffold00154 268304 1 G T scaffold4853 Both SNP 0041.scaffold00154 268422 1 T A scaffold4853 Both INDEL 0041.scaffold00154 268464 2 AA .. scaffold4853 Both SNP 0041.scaffold00154 268961 1 C A scaffold4853 Both SNP 0041.scaffold00154 269050 1 C G scaffold4853 Both SNP 0041.scaffold00154 269341 1 T C scaffold4853 Both SNP 0041.scaffold00154 269479 1 C G scaffold4853 ReadM SNP 0041.scaffold00154 269622 1 C T - Both SNP 0041.scaffold00154 269835 1 T C scaffold4853 ScafM SNP 0041.scaffold00154 270001 1 T A scaffold4853 Both SNP 0041.scaffold00154 270521 1 C T scaffold4853 Both INDEL 0041.scaffold00154 270542 1 A . scaffold4853 ScafM INDEL 0041.scaffold00154 271120 1 T . scaffold4853 ScafM SNP 0041.scaffold00154 271144 1 T C scaffold4853 Both SNP 0041.scaffold00154 271727 1 T C scaffold4853 ReadM SNP 0041.scaffold00154 272333 1 G T - ReadM SNP 0041.scaffold00154 272367 1 C T - ReadM SNP 0041.scaffold00154 272553 1 C T - ReadM SNP 0041.scaffold00154 272665 1 G A - ReadM SNP 0041.scaffold00154 272938 1 A G - ReadM SNP 0041.scaffold00154 273005 1 G C - ReadM SNP 0041.scaffold00154 273147 1 T C - ReadM SNP 0041.scaffold00154 273149 1 A G - ReadM SNP 0041.scaffold00154 273308 1 G T - ReadM SNP 0041.scaffold00154 273420 1 A G - ReadM SNP 0041.scaffold00154 273757 1 A G - ReadM SNP 0041.scaffold00154 274021 1 T C - ReadM SNP 0041.scaffold00154 274324 1 C T - ReadM SNP 0041.scaffold00154 274365 1 A G - ReadM SNP 0041.scaffold00154 274756 1 A T - ReadM SNP 0041.scaffold00154 274959 1 C T - ReadM SNP 0041.scaffold00154 275136 1 T C - ReadM SNP 0041.scaffold00154 275634 1 C T - ReadM SNP 0041.scaffold00154 275650 1 C G - ReadM SNP 0041.scaffold00154 275781 1 C G - ReadM INDEL 0041.scaffold00154 275805 1 C . - ReadM SNP 0041.scaffold00154 275872 1 A C - ReadM SNP 0041.scaffold00154 276143 1 C G - ReadM INDEL 0041.scaffold00154 276330 1 . C - ReadM SNP 0041.scaffold00154 276451 1 C G - ReadM SNP 0041.scaffold00154 276515 1 G A - ReadM SNP 0041.scaffold00154 276576 1 C T - ReadM SNP 0041.scaffold00154 276649 1 G T - ReadM SNP 0041.scaffold00154 276843 1 T C - ReadM SNP 0041.scaffold00154 277010 1 G A - ReadM SNP 0041.scaffold00154 277441 1 C A - ReadM SNP 0041.scaffold00154 277658 1 C T - ReadM SNP 0041.scaffold00154 277696 1 C A - ReadM SNP 0041.scaffold00154 277790 1 G A - ReadM SNP 0041.scaffold00154 277911 1 T C - ReadM SNP 0041.scaffold00154 277995 1 G C - ReadM SNP 0041.scaffold00154 278293 1 G T - Both SNP 0041.scaffold00154 278688 1 T C scaffold4853 Both SNP 0041.scaffold00154 278901 1 A T scaffold4853 Both SNP 0041.scaffold00154 278948 1 T C scaffold4853 Both SNP 0041.scaffold00154 279009 1 T G scaffold4853 ScafM SNP 0041.scaffold00154 279150 2 AA GG scaffold4853 Both SNP 0041.scaffold00154 279406 1 A G scaffold4853 ReadM SNP 0041.scaffold00154 279620 1 T A - ReadM SNP 0041.scaffold00154 279628 1 A G - ReadM SNP 0041.scaffold00154 279965 1 C G - ScafM SNP 0041.scaffold00154 280845 1 C G scaffold1721 ScafM SNP 0041.scaffold00154 280851 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 280882 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 280886 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 280889 1 G C scaffold1721 ScafM SNP 0041.scaffold00154 280926 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 280938 1 G C scaffold1721 ScafM SNP 0041.scaffold00154 280942 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 280951 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 280957 1 A T scaffold1721 ScafM SNP 0041.scaffold00154 280965 1 A C scaffold1721 ScafM SNP 0041.scaffold00154 280978 1 G C scaffold1721 ScafM SNP 0041.scaffold00154 280988 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281032 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 281054 1 C G scaffold1721 ScafM SNP 0041.scaffold00154 281117 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 281120 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281153 2 TC AA scaffold1721 ScafM SNP 0041.scaffold00154 281158 1 T G scaffold1721 ScafM SNP 0041.scaffold00154 281162 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281165 1 G A scaffold1721 ScafM INDEL 0041.scaffold00154 281197 2 .G AT scaffold1721 ScafM SNP 0041.scaffold00154 281222 1 C G scaffold1721 ScafM SNP 0041.scaffold00154 281226 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281254 1 C A scaffold1721 ScafM SNP 0041.scaffold00154 281261 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 281286 1 A T scaffold1721 ScafM SNP 0041.scaffold00154 281298 1 T G scaffold1721 ScafM SNP 0041.scaffold00154 281301 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281319 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281336 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281339 1 T G scaffold1721 ScafM SNP 0041.scaffold00154 281362 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 281424 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281432 1 C A scaffold1721 ScafM SNP 0041.scaffold00154 281569 1 T C scaffold1721 ScafM SNP 0041.scaffold00154 281674 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 281718 1 C G scaffold1721 ScafM SNP 0041.scaffold00154 281721 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281723 2 AA GG scaffold1721 ScafM SNP 0041.scaffold00154 281730 1 G A scaffold1721 ScafM SNP 0041.scaffold00154 281732 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 281737 2 AA GG scaffold1721 ScafM SNP 0041.scaffold00154 281778 1 A G scaffold1721 ScafM SNP 0041.scaffold00154 281789 1 A C scaffold1721 ScafM SNP 0041.scaffold00154 281829 1 C T scaffold1721 ScafM SNP 0041.scaffold00154 281832 1 T C scaffold1721 ScafM SNP 0041.scaffold00154 281847 1 T A scaffold1721 ReadM SNP 0041.scaffold00154 283252 1 G C - ReadM SNP 0041.scaffold00154 283268 1 C T - ReadM SNP 0041.scaffold00154 283513 1 T G - ReadM SNP 0041.scaffold00154 283770 1 T G - ReadM SNP 0041.scaffold00154 284110 1 T G - ReadM SNP 0041.scaffold00154 284268 1 A G - ReadM SNP 0041.scaffold00154 284509 1 G T - ReadM SNP 0041.scaffold00154 284525 1 G A - ReadM SNP 0041.scaffold00154 284627 1 A G - ReadM SNP 0041.scaffold00154 284677 1 G A - ReadM SNP 0041.scaffold00154 284709 1 T G - ReadM SNP 0041.scaffold00154 284957 1 G A - ReadM SNP 0041.scaffold00154 284963 1 T C - ReadM SNP 0041.scaffold00154 285246 1 T C - ReadM SNP 0041.scaffold00154 285413 1 C T - ReadM SNP 0041.scaffold00154 285451 1 C G - ReadM SNP 0041.scaffold00154 285468 1 T C - ReadM SNP 0041.scaffold00154 285656 1 T C - ReadM SNP 0041.scaffold00154 285738 1 G A - ReadM SNP 0041.scaffold00154 285822 1 A G - ReadM SNP 0041.scaffold00154 285958 1 G T - ReadM SNP 0041.scaffold00154 286009 1 A G - ReadM SNP 0041.scaffold00154 286242 1 C T - ReadM SNP 0041.scaffold00154 286615 1 G T - ReadM SNP 0041.scaffold00154 286755 1 A G - ReadM SNP 0041.scaffold00154 286829 1 T C - ReadM SNP 0041.scaffold00154 286926 1 C T - ReadM SNP 0041.scaffold00154 286937 1 G T - ReadM SNP 0041.scaffold00154 287275 1 G A - ReadM SNP 0041.scaffold00154 287318 1 A C - ReadM SNP 0041.scaffold00154 287337 1 C G - ReadM SNP 0041.scaffold00154 287382 1 G A - ReadM SNP 0041.scaffold00154 287479 1 A G - ReadM SNP 0041.scaffold00154 287530 1 G A - ReadM SNP 0041.scaffold00154 287552 1 G A - ReadM SNP 0041.scaffold00154 287655 1 C G - ReadM SNP 0041.scaffold00154 287768 1 A G - ReadM SNP 0041.scaffold00154 287839 1 T C - ReadM SNP 0041.scaffold00154 288308 1 A C - ReadM SNP 0041.scaffold00154 288314 1 T C - ReadM SNP 0041.scaffold00154 288486 1 A G - ReadM SNP 0041.scaffold00154 288659 1 T C - ReadM SNP 0041.scaffold00154 288767 1 G C - ReadM SNP 0041.scaffold00154 288853 1 C T - ReadM SNP 0041.scaffold00154 288880 1 T C - ReadM SNP 0041.scaffold00154 289058 1 T C - ReadM SNP 0041.scaffold00154 289158 1 G C - Both SNP 0041.scaffold00154 289285 1 C G scaffold11860 Both SNP 0041.scaffold00154 289366 1 A G scaffold11860 Both SNP 0041.scaffold00154 289390 1 T C scaffold11860 Both SNP 0041.scaffold00154 289400 1 C T scaffold11860 ReadM SNP 0041.scaffold00154 289624 1 A C - ReadM SNP 0041.scaffold00154 289793 1 A G - ReadM INDEL 0041.scaffold00154 289907 1 T . - ReadM SNP 0041.scaffold00154 289923 1 G A - ReadM SNP 0041.scaffold00154 289939 1 C T - ReadM SNP 0041.scaffold00154 290339 1 C T - ReadM SNP 0041.scaffold00154 290405 1 A T - ReadM SNP 0041.scaffold00154 290707 1 T C - ReadM SNP 0041.scaffold00154 290829 1 G C - ReadM SNP 0041.scaffold00154 291127 1 A C - ReadM SNP 0041.scaffold00154 291183 1 C T - ReadM SNP 0041.scaffold00154 291202 1 T G - ReadM SNP 0041.scaffold00154 291322 1 C T - ReadM INDEL 0041.scaffold00154 291427 1 C . - ReadM SNP 0041.scaffold00154 291687 1 C T - ReadM SNP 0041.scaffold00154 291692 1 C G - ReadM SNP 0041.scaffold00154 291708 1 C G - ReadM SNP 0041.scaffold00154 291729 1 C T - ReadM SNP 0041.scaffold00154 291863 1 C T - ReadM SNP 0041.scaffold00154 292345 1 G A - ReadM SNP 0041.scaffold00154 292444 1 G T - ReadM SNP 0041.scaffold00154 292478 1 G A - ReadM SNP 0041.scaffold00154 292618 1 T C - ReadM SNP 0041.scaffold00154 292893 1 C A - ReadM INDEL 0041.scaffold00154 293584 1 A . - ReadM SNP 0041.scaffold00154 294383 1 T C - ReadM SNP 0041.scaffold00154 294908 1 A G - ReadM SNP 0041.scaffold00154 295067 1 C T - ReadM INDEL 0041.scaffold00154 295133 1 T . - ReadM SNP 0041.scaffold00154 297117 1 T C - ReadM SNP 0041.scaffold00154 297217 1 A G - ReadM SNP 0041.scaffold00154 298025 1 C T - ReadM SNP 0041.scaffold00154 298062 1 G T - ReadM SNP 0041.scaffold00154 298405 1 C A - ReadM SNP 0041.scaffold00154 298420 1 C T - ReadM SNP 0041.scaffold00154 298456 1 G C - ReadM SNP 0041.scaffold00154 298561 1 T A - ReadM SNP 0041.scaffold00154 298868 1 G A - ReadM SNP 0041.scaffold00154 298933 1 G C - ReadM INDEL 0041.scaffold00154 299075 1 . A - ReadM SNP 0041.scaffold00154 299227 1 A T - ReadM SNP 0041.scaffold00154 299976 1 A C - ReadM SNP 0041.scaffold00154 300010 1 G A - ReadM SNP 0041.scaffold00154 300823 1 G A - ReadM SNP 0041.scaffold00154 301053 1 G A - ReadM SNP 0041.scaffold00154 303950 1 C T - ReadM SNP 0041.scaffold00154 303993 1 G A - ReadM INDEL 0041.scaffold00154 304063 1 A . - ReadM SNP 0041.scaffold00154 304151 1 A G - ReadM SNP 0041.scaffold00154 304365 1 T C - ReadM SNP 0041.scaffold00154 304422 1 G A - ReadM SNP 0041.scaffold00154 305222 1 A G - ReadM SNP 0041.scaffold00154 305655 1 C A - ReadM SNP 0041.scaffold00154 305803 1 A G - ReadM SNP 0041.scaffold00154 305940 1 A G - ReadM SNP 0041.scaffold00154 305949 1 C T - ReadM SNP 0041.scaffold00154 305966 1 C A - ReadM SNP 0041.scaffold00154 306180 1 T C - ReadM SNP 0041.scaffold00154 306648 1 A T - Both SNP 0041.scaffold00154 306784 1 T G scaffold12031 Both SNP 0041.scaffold00154 306884 1 A G scaffold12031 Both SNP 0041.scaffold00154 307266 1 A G scaffold12031 Both SNP 0041.scaffold00154 307298 1 T C scaffold12031 Both SNP 0041.scaffold00154 307466 1 A G scaffold12031 Both SNP 0041.scaffold00154 307605 1 T A scaffold12031 ScafM SNP 0041.scaffold00154 307796 2 CA AG scaffold12031 ReadM SNP 0041.scaffold00154 307797 1 A G - Both SNP 0041.scaffold00154 307837 1 A G scaffold12031 ScafM SNP 0041.scaffold00154 307879 1 A G scaffold12031 ScafM SNP 0041.scaffold00154 307945 1 G A scaffold12031 Both SNP 0041.scaffold00154 308626 1 T C scaffold12031 ScafM SNP 0041.scaffold00154 308733 1 A G scaffold12031 Both SNP 0041.scaffold00154 309609 1 C G scaffold12031 Both INDEL 0041.scaffold00154 310148 1 G . scaffold12031 Both SNP 0041.scaffold00154 310483 1 A G scaffold12031 Both SNP 0041.scaffold00154 310981 1 A G scaffold12031 Both SNP 0041.scaffold00154 311378 1 C G scaffold12031 Both SNP 0041.scaffold00154 311470 1 C T scaffold12031 Both SNP 0041.scaffold00154 311542 1 T C scaffold12031 ScafM INDEL 0041.scaffold00154 312048 1 A . scaffold12031 ScafM INDEL 0041.scaffold00154 312119 38 ...................................... AATATATATAGCAAGATAAAACTAAAATAATACAGTTT scaffold12031 ScafM SNP 0041.scaffold00154 312380 1 G T scaffold12031 Both SNP 0041.scaffold00154 312445 1 T C scaffold12031 ReadM SNP 0041.scaffold00154 312737 1 G C - ReadM SNP 0041.scaffold00154 312826 1 A T - ReadM SNP 0041.scaffold00154 313122 1 T G - ReadM SNP 0041.scaffold00154 313125 1 A G - ReadM SNP 0041.scaffold00154 313148 1 T C - ReadM INDEL 0041.scaffold00154 313222 1 . G - ScafM SNP 0041.scaffold00154 314117 1 G A scaffold1080 ScafM SNP 0041.scaffold00154 314140 1 C T scaffold1080 ScafM SNP 0041.scaffold00154 314166 1 G A scaffold1080 ScafM SNP 0041.scaffold00154 314178 1 C A scaffold1080 ScafM INDEL 0041.scaffold00154 314206 3 ... TCA scaffold1080 ScafM INDEL 0041.scaffold00154 314229 1 . C scaffold1080 ScafM SNP 0041.scaffold00154 314241 1 C T scaffold1080 ScafM SNP 0041.scaffold00154 314267 1 C A scaffold1080 ScafM SNP 0041.scaffold00154 314298 1 A C scaffold1080 ScafM INDEL 0041.scaffold00154 314390 5 ACACT ..... scaffold1080 ScafM SNP 0041.scaffold00154 314422 1 T C scaffold1080 ScafM SNP 0041.scaffold00154 314488 1 G A scaffold1080 ScafM SNP 0041.scaffold00154 314511 1 A C scaffold1080 ScafM SNP 0041.scaffold00154 314524 1 G C scaffold1080 ScafM SNP 0041.scaffold00154 314597 1 T C scaffold1080 ScafM SNP 0041.scaffold00154 314737 1 T A scaffold1080 ScafM INDEL 0041.scaffold00154 314742 3 AGA ... scaffold1080 ScafM SNP 0041.scaffold00154 314791 1 T C scaffold1080 ScafM SNP 0041.scaffold00154 314827 1 A G scaffold1080 ScafM SNP 0041.scaffold00154 314839 1 T G scaffold1080 Both INDEL 0041.scaffold00154 315254 1 A . scaffold14469 ReadM SNP 0041.scaffold00154 315745 1 C T - ReadM SNP 0041.scaffold00154 315756 1 T G - ReadM SNP 0041.scaffold00154 316029 1 A C - ReadM SNP 0041.scaffold00154 316035 1 C T - ReadM SNP 0041.scaffold00154 316426 1 T A - ReadM SNP 0041.scaffold00154 316629 1 G A - ReadM INDEL 0041.scaffold00154 317352 2 TT .. - ScafM SNP 0041.scaffold00154 317682 1 C T scaffold14469 ScafM SNP 0041.scaffold00154 318698 1 A T scaffold14469 Both SNP 0041.scaffold00154 318806 1 A G scaffold14469 ReadM SNP 0041.scaffold00154 319002 1 A C - ReadM SNP 0041.scaffold00154 319186 1 T G - ReadM SNP 0041.scaffold00154 319265 1 A G - ScafM INDEL 0041.scaffold00154 319370 1 . A scaffold14469 Both SNP 0041.scaffold00154 319639 1 G A scaffold14469 Both SNP 0041.scaffold00154 319718 1 T C scaffold14469 Both SNP 0041.scaffold00154 319755 1 T C scaffold14469 Both SNP 0041.scaffold00154 319798 1 T C scaffold14469 Both SNP 0041.scaffold00154 319807 1 T C scaffold14469 Both INDEL 0041.scaffold00154 319828 1 . G scaffold14469 Both INDEL 0041.scaffold00154 320101 1 . A scaffold14469 ReadM SNP 0041.scaffold00154 321502 1 C G - ReadM SNP 0041.scaffold00154 321716 1 C G - ReadM SNP 0041.scaffold00154 322050 1 G T - ReadM SNP 0041.scaffold00154 322263 1 G A - ReadM SNP 0041.scaffold00154 322272 1 T A - ReadM INDEL 0041.scaffold00154 322571 1 . T - ReadM SNP 0041.scaffold00154 322725 1 T C - ReadM SNP 0041.scaffold00154 322744 1 G C - ReadM INDEL 0041.scaffold00154 322824 1 G . - ReadM SNP 0041.scaffold00154 322850 1 A G - ReadM SNP 0041.scaffold00154 322955 1 G A - ReadM SNP 0041.scaffold00154 323049 1 A G - ReadM SNP 0041.scaffold00154 323162 1 C T - ReadM SNP 0041.scaffold00154 323261 1 C T - ReadM SNP 0041.scaffold00154 323330 1 G T - ReadM SNP 0041.scaffold00154 323489 1 G C - ReadM SNP 0041.scaffold00154 323638 1 A G - ReadM SNP 0041.scaffold00154 323685 1 C T - ReadM SNP 0041.scaffold00154 323724 1 G A - Both SNP 0041.scaffold00154 324203 1 C G scaffold14469 ScafM SNP 0041.scaffold00154 325052 2 TG GC scaffold14469 Both SNP 0041.scaffold00154 325312 1 A G scaffold14469 Both SNP 0041.scaffold00154 325338 1 T C scaffold14469 ScafM SNP 0041.scaffold00154 325365 1 A C scaffold14469 ScafM INDEL 0041.scaffold00154 325506 2 .. TT scaffold14469 Both SNP 0041.scaffold00154 325561 1 C T scaffold14469 Both SNP 0041.scaffold00154 325564 1 A C scaffold14469 Both SNP 0041.scaffold00154 325789 1 C A scaffold14469 Both SNP 0041.scaffold00154 325898 1 C A scaffold14469 ScafM INDEL 0041.scaffold00154 325938 3 ... AAA scaffold14469 Both SNP 0041.scaffold00154 325945 1 G A scaffold14469 Both SNP 0041.scaffold00154 326275 1 C T scaffold14469 ReadM SNP 0041.scaffold00154 326884 1 A C - ReadM SNP 0041.scaffold00154 326895 1 C G - ReadM SNP 0041.scaffold00154 326957 1 T C - ReadM INDEL 0041.scaffold00154 327396 1 . T - ReadM SNP 0041.scaffold00154 327995 1 G A - ReadM SNP 0041.scaffold00154 328226 1 T C - Both SNP 0041.scaffold00154 328914 1 T A scaffold14469 ScafM INDEL 0041.scaffold00154 329135 1 T . scaffold14469 ScafM SNP 0041.scaffold00154 329139 1 T C scaffold14469 ScafM SNP 0041.scaffold00154 329189 1 C G scaffold14469 ScafM INDEL 0041.scaffold00154 329193 1 A . scaffold14469 ScafM SNP 0041.scaffold00154 329195 1 A G scaffold14469 ScafM SNP 0041.scaffold00154 329233 1 T G scaffold14469 ReadM SNP 0041.scaffold00154 329416 1 A G - ScafM SNP 0041.scaffold00154 330137 1 G C scaffold4654 ReadM SNP 0041.scaffold00154 332467 1 T C - ScafM SNP 0041.scaffold00154 332720 1 A G scaffold10592 ScafM SNP 0041.scaffold00154 332725 1 A T scaffold10592 ReadM SNP 0041.scaffold00154 332900 1 C T - ReadM SNP 0041.scaffold00154 332908 1 C T - Both INDEL 0041.scaffold00154 333568 1 . G scaffold10592 Both SNP 0041.scaffold00154 333644 1 T C scaffold10592 ReadM SNP 0041.scaffold00154 334466 1 T C - ReadM SNP 0041.scaffold00154 334553 1 A G - ReadM SNP 0041.scaffold00154 334802 1 A G - Both SNP 0041.scaffold00154 335321 1 C T scaffold10592 Both INDEL 0041.scaffold00154 335534 1 C . scaffold10592 Both SNP 0041.scaffold00154 335760 1 T C scaffold10592 Both SNP 0041.scaffold00154 335814 1 T G scaffold10592 Both SNP 0041.scaffold00154 336009 1 C T scaffold10592 ScafM SNP 0041.scaffold00154 336046 1 G A scaffold10592 Both SNP 0041.scaffold00154 336193 1 T C scaffold10592 Both SNP 0041.scaffold00154 336559 1 C T scaffold10592 ReadM SNP 0041.scaffold00154 336805 1 A G - ReadM SNP 0041.scaffold00154 337093 1 C T - ReadM SNP 0041.scaffold00154 337128 1 A G - ReadM SNP 0041.scaffold00154 337257 1 C A - ReadM SNP 0041.scaffold00154 337272 1 A C - ReadM SNP 0041.scaffold00154 337385 1 T A - ReadM SNP 0041.scaffold00154 337553 1 G A - ReadM SNP 0041.scaffold00154 337659 1 C G - ReadM SNP 0041.scaffold00154 337672 1 G A - ReadM SNP 0041.scaffold00154 337752 1 A G - ReadM SNP 0041.scaffold00154 338112 1 G A - ReadM SNP 0041.scaffold00154 338229 1 G A - ReadM SNP 0041.scaffold00154 338338 1 C T - ReadM SNP 0041.scaffold00154 338355 1 T C - ReadM SNP 0041.scaffold00154 338369 1 T A - ReadM SNP 0041.scaffold00154 338427 1 G C - ReadM INDEL 0041.scaffold00154 338490 1 T . - ReadM SNP 0041.scaffold00154 338597 1 A G - ReadM SNP 0041.scaffold00154 338996 1 C T - ReadM SNP 0041.scaffold00154 339054 1 T A - ReadM SNP 0041.scaffold00154 339070 1 A G - ReadM SNP 0041.scaffold00154 339670 1 G A - ReadM SNP 0041.scaffold00154 340099 1 A G - ReadM SNP 0041.scaffold00154 340147 1 C T - ReadM SNP 0041.scaffold00154 340191 1 T C - ReadM SNP 0041.scaffold00154 340209 1 A C - ReadM SNP 0041.scaffold00154 340327 1 C A - ScafM SNP 0041.scaffold00154 341802 1 C T scaffold10592 ScafM SNP 0041.scaffold00154 341864 1 T C scaffold10592 ScafM SNP 0041.scaffold00154 341875 1 C T scaffold10592 ScafM SNP 0041.scaffold00154 341906 1 C T scaffold10592 ReadM SNP 0041.scaffold00154 341969 1 A C - Both SNP 0041.scaffold00154 342385 1 A G scaffold10592 ReadM SNP 0041.scaffold00154 342979 1 G A - ReadM SNP 0041.scaffold00154 343561 1 G C - ReadM SNP 0041.scaffold00154 343598 1 A G - Both SNP 0041.scaffold00154 343767 1 T C scaffold10592 Both SNP 0041.scaffold00154 344001 1 C A scaffold10592 Both SNP 0041.scaffold00154 344193 1 T A scaffold10592 ScafM SNP 0041.scaffold00154 344203 1 A G scaffold10592 Both SNP 0041.scaffold00154 344542 1 T G scaffold10592 Both SNP 0041.scaffold00154 344545 1 C T scaffold10592 Both SNP 0041.scaffold00154 344830 1 T A scaffold10592 Both SNP 0041.scaffold00154 344882 1 T C scaffold10592 ScafM SNP 0041.scaffold00154 344984 1 C A scaffold10592 ScafM SNP 0041.scaffold00154 344988 1 G A scaffold10592 ReadM SNP 0041.scaffold00154 345390 1 T G - ReadM SNP 0041.scaffold00154 345467 1 T C - ReadM SNP 0041.scaffold00154 345498 1 T C - ReadM SNP 0041.scaffold00154 345531 1 A G - ReadM SNP 0041.scaffold00154 345889 1 T C - ReadM SNP 0041.scaffold00154 346227 1 C T - ReadM SNP 0041.scaffold00154 346711 1 A G - ReadM SNP 0041.scaffold00154 346896 1 C A - ReadM SNP 0041.scaffold00154 347140 1 T C - ReadM SNP 0041.scaffold00154 347187 1 C T - Both INDEL 0041.scaffold00154 347309 1 T . scaffold10592 Both SNP 0041.scaffold00154 347472 1 A C scaffold10592 ScafM SNP 0041.scaffold00154 347867 1 A C scaffold10592 Both SNP 0041.scaffold00154 348169 1 C T scaffold10592 ReadM SNP 0041.scaffold00154 348370 1 A T - ReadM SNP 0041.scaffold00154 348436 1 T A - ReadM INDEL 0041.scaffold00154 348459 1 A . - ReadM SNP 0041.scaffold00154 348559 1 C A - ReadM SNP 0041.scaffold00154 348661 1 C G - ReadM SNP 0041.scaffold00154 348951 1 T A - Both SNP 0041.scaffold00154 348999 1 A C scaffold10592 ReadM SNP 0041.scaffold00154 349082 1 G A - ReadM SNP 0041.scaffold00154 349112 1 C A - ReadM SNP 0041.scaffold00154 351081 1 A C - ReadM SNP 0041.scaffold00154 352933 1 T C - ReadM SNP 0041.scaffold00154 352998 1 T C - ReadM SNP 0041.scaffold00154 353083 1 G A - ReadM SNP 0041.scaffold00154 353216 1 T G - ReadM SNP 0041.scaffold00154 353297 1 G C - ReadM SNP 0041.scaffold00154 353472 1 T C - ReadM SNP 0041.scaffold00154 353579 1 G C - ReadM SNP 0041.scaffold00154 353741 1 G A - Both SNP 0041.scaffold00154 353812 1 T C scaffold11491 Both SNP 0041.scaffold00154 354219 1 C G scaffold11491 Both SNP 0041.scaffold00154 354389 1 C G scaffold11491 Both SNP 0041.scaffold00154 354551 1 G A scaffold11491 Both SNP 0041.scaffold00154 355046 1 T C scaffold11491 Both SNP 0041.scaffold00154 355089 1 C T scaffold11491 Both INDEL 0041.scaffold00154 355196 1 . A scaffold11491 ScafM SNP 0041.scaffold00154 355274 1 A G scaffold11491 ScafM SNP 0041.scaffold00154 355277 1 A T scaffold11491 Both SNP 0041.scaffold00154 355440 1 G A scaffold11491 Both SNP 0041.scaffold00154 355509 1 G C scaffold11491 Both SNP 0041.scaffold00154 355759 1 C A scaffold11491 ReadM INDEL 0041.scaffold00154 355824 1 . T - ReadM SNP 0041.scaffold00154 355846 1 T A - Both SNP 0041.scaffold00154 356549 1 G A scaffold11491 Both SNP 0041.scaffold00154 356589 1 C T scaffold11491 Both INDEL 0041.scaffold00154 356673 1 T . scaffold11491 Both SNP 0041.scaffold00154 356723 1 G A scaffold11491 ScafM SNP 0041.scaffold00154 356736 1 G A scaffold11491 ScafM SNP 0041.scaffold00154 356914 1 G C scaffold11491 ScafM INDEL 0041.scaffold00154 358661 5 ..... AAGGG scaffold11491 ReadM SNP 0041.scaffold00154 358741 1 T C - Both SNP 0041.scaffold00154 358880 1 C T scaffold11491 Both SNP 0041.scaffold00154 359449 1 G C scaffold11491 ScafM SNP 0041.scaffold00154 359633 1 T G scaffold11491 ScafM SNP 0041.scaffold00154 360289 1 A G scaffold11491 ScafM INDEL 0041.scaffold00154 361641 18 TTGAATTCAAGCTAGATG .................. scaffold11491 ScafM INDEL 0041.scaffold00154 362006 6 ...... ATAACT scaffold11491 Both SNP 0041.scaffold00154 362477 1 A G scaffold11491 Both SNP 0041.scaffold00154 363614 1 T C scaffold11491 ScafM SNP 0041.scaffold00154 363640 1 G C scaffold11491 Both SNP 0041.scaffold00154 363730 1 G A scaffold11491 Both SNP 0041.scaffold00154 364166 1 A T scaffold11491 Both INDEL 0041.scaffold00154 364917 2 .. TA scaffold11491 ScafM INDEL 0041.scaffold00154 364989 4 .... TACT scaffold11491 Both SNP 0041.scaffold00154 365352 1 G A scaffold11491 Both SNP 0041.scaffold00154 366029 1 G T scaffold11491 Both SNP 0041.scaffold00154 366320 1 G C scaffold11491 Both SNP 0041.scaffold00154 366520 1 T C scaffold11491 Both SNP 0041.scaffold00154 366619 1 T A scaffold11491 Both SNP 0041.scaffold00154 367044 1 A G scaffold11491 Both INDEL 0041.scaffold00154 367077 2 AA .. scaffold11491 Both SNP 0041.scaffold00154 367271 1 C A scaffold11491 Both SNP 0041.scaffold00154 367937 1 A G scaffold11491 Both INDEL 0041.scaffold00154 368131 3 GTT ... scaffold11491 Both INDEL 0041.scaffold00154 369032 2 AT .. scaffold11491 ScafM SNP 0041.scaffold00154 369282 1 C T scaffold11491 ScafM SNP 0041.scaffold00154 370248 1 T C scaffold11491 ScafM SNP 0041.scaffold00154 370543 1 G A scaffold11491 Both INDEL 0041.scaffold00154 370730 1 G . scaffold11491 Both SNP 0041.scaffold00154 371131 1 T C scaffold11491 ScafM SNP 0041.scaffold00154 371223 1 G T scaffold11491 ReadM SNP 0041.scaffold00154 371836 1 A T - ReadM INDEL 0041.scaffold00154 371875 1 . C - ReadM SNP 0041.scaffold00154 371902 1 T C - ReadM SNP 0041.scaffold00154 372123 1 C T - ReadM INDEL 0041.scaffold00154 372648 1 G . - ReadM SNP 0041.scaffold00154 373437 1 A T - ReadM SNP 0041.scaffold00154 373666 1 A C - ReadM SNP 0041.scaffold00154 373682 1 A G - ReadM SNP 0041.scaffold00154 374202 1 T G - ScafM SNP 0041.scaffold00154 374816 1 T C scaffold11491 Both SNP 0041.scaffold00154 375043 1 T G scaffold11491 Both SNP 0041.scaffold00154 375078 1 G A scaffold11491 Both SNP 0041.scaffold00154 375597 1 G T scaffold11491 Both SNP 0041.scaffold00154 375603 1 A T scaffold11491 Both SNP 0041.scaffold00154 377259 1 G A scaffold11491 Both SNP 0041.scaffold00154 377355 1 A C scaffold11491 ScafM INDEL 0041.scaffold00154 377659 7 TGACGAA ....... scaffold11491 Both SNP 0041.scaffold00154 377796 1 A G scaffold11491 ScafM INDEL 0041.scaffold00154 378043 2 .. TC scaffold11491 ScafM SNP 0041.scaffold00154 378044 3 GAG TCT scaffold11491 ScafM SNP 0041.scaffold00154 378086 1 T C scaffold11491 ReadM SNP 0041.scaffold00154 378393 1 T C - Both SNP 0041.scaffold00154 378644 1 C T scaffold14915 ScafM SNP 0041.scaffold00154 378701 1 A T scaffold14915 Both SNP 0041.scaffold00154 379225 1 A T scaffold14915 Both SNP 0041.scaffold00154 379430 1 T C scaffold14915 Both SNP 0041.scaffold00154 379836 1 A G scaffold14915 Both SNP 0041.scaffold00154 380201 1 C G scaffold14915 Both SNP 0041.scaffold00154 380236 1 G A scaffold14915 Both INDEL 0041.scaffold00154 380531 1 . T scaffold14915 ScafM SNP 0041.scaffold00154 380533 1 A T scaffold14915 Both SNP 0041.scaffold00154 380646 1 T G scaffold14915 Both INDEL 0041.scaffold00154 380767 1 . T scaffold14915 ScafM INDEL 0041.scaffold00154 381226 3 ..A TTT scaffold14915 ScafM SNP 0041.scaffold00154 381250 1 A C scaffold14915 Both SNP 0041.scaffold00154 382027 1 G T scaffold14915 Both SNP 0041.scaffold00154 382121 1 G C scaffold14915 Both SNP 0041.scaffold00154 382845 1 T C scaffold14915 Both SNP 0041.scaffold00154 383682 1 G C scaffold14915 Both SNP 0041.scaffold00154 383712 1 T C scaffold14915 Both SNP 0041.scaffold00154 383862 1 T C scaffold14915 ReadM INDEL 0041.scaffold00154 385041 1 T . - ScafM INDEL 0041.scaffold00154 385041 2 TT .A scaffold14915 Both SNP 0041.scaffold00154 385180 1 T C scaffold14915 Both SNP 0041.scaffold00154 385287 1 T C scaffold14915 Both SNP 0041.scaffold00154 385535 1 T G scaffold14915 Both SNP 0041.scaffold00154 385907 1 T C scaffold14915 Both SNP 0041.scaffold00154 386738 1 T C scaffold14915 Both SNP 0041.scaffold00154 387016 1 C T scaffold14915 ScafM SNP 0041.scaffold00154 388918 1 T G scaffold11442 ScafM SNP 0041.scaffold00154 388933 1 G C scaffold11442 ScafM SNP 0041.scaffold00154 388938 1 T A scaffold11442 ScafM SNP 0041.scaffold00154 388957 2 GA TG scaffold11442 ScafM SNP 0041.scaffold00154 388969 1 C T scaffold11442 ScafM SNP 0041.scaffold00154 388978 1 C A scaffold11442 ScafM INDEL 0041.scaffold00154 388983 1 G . scaffold11442 ScafM SNP 0041.scaffold00154 388991 1 A C scaffold11442 ScafM SNP 0041.scaffold00154 389016 1 A T scaffold11442 ScafM SNP 0041.scaffold00154 389028 1 T A scaffold11442 ScafM SNP 0041.scaffold00154 389031 2 CT TG scaffold11442 ScafM SNP 0041.scaffold00154 389046 1 A C scaffold11442 ScafM SNP 0041.scaffold00154 389051 1 C T scaffold11442 ScafM SNP 0041.scaffold00154 389094 1 G T scaffold11442 ScafM SNP 0041.scaffold00154 389174 1 C A scaffold11442 ScafM SNP 0041.scaffold00154 389184 1 A G scaffold11442 ScafM SNP 0041.scaffold00154 389236 1 T C scaffold11442 ScafM INDEL 0041.scaffold00154 389252 1 . T scaffold11442 ScafM INDEL 0041.scaffold00154 389256 1 . C scaffold11442 ScafM SNP 0041.scaffold00154 389261 1 A T scaffold11442 ScafM SNP 0041.scaffold00154 389316 1 T C scaffold11442 ScafM SNP 0041.scaffold00154 389327 1 G T scaffold11442 ScafM SNP 0041.scaffold00154 389352 1 C T scaffold11442 ScafM SNP 0041.scaffold00154 389383 1 G A scaffold11442 ScafM SNP 0041.scaffold00154 389398 1 C T scaffold11442 ScafM SNP 0041.scaffold00154 389416 1 A G scaffold11442 ScafM SNP 0041.scaffold00154 389457 1 A G scaffold11442 ReadM SNP 0041.scaffold00154 398253 1 A C - ReadM SNP 0041.scaffold00154 398379 1 T G - ReadM SNP 0041.scaffold00154 398398 1 G A - ReadM SNP 0041.scaffold00154 398655 1 G A - ReadM SNP 0041.scaffold00154 398724 1 C T - ReadM SNP 0041.scaffold00154 398728 1 T G - ReadM SNP 0041.scaffold00154 398848 1 G A - ReadM SNP 0041.scaffold00154 398996 1 T C - ReadM SNP 0041.scaffold00154 399376 2 CC TT - ReadM SNP 0041.scaffold00154 399510 1 C G - Both SNP 0041.scaffold00154 399732 1 C A scaffold12637 ScafM SNP 0041.scaffold00154 400026 1 A G scaffold12637 Both SNP 0041.scaffold00154 400136 1 G T scaffold12637 ScafM SNP 0041.scaffold00154 400138 1 C A scaffold12637 ScafM SNP 0041.scaffold00154 400287 1 T G scaffold12637 ScafM SNP 0041.scaffold00154 400310 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 400371 2 AA GT scaffold12637 ReadM SNP 0041.scaffold00154 402933 1 C G - ScafM SNP 0041.scaffold00154 404650 1 C G scaffold10173 ScafM SNP 0041.scaffold00154 404711 1 T G scaffold10173 ScafM SNP 0041.scaffold00154 404845 1 G A scaffold10173 ScafM SNP 0041.scaffold00154 404857 1 A C scaffold10173 ScafM SNP 0041.scaffold00154 404933 1 T C scaffold10173 ScafM SNP 0041.scaffold00154 404973 1 G A scaffold10173 ScafM SNP 0041.scaffold00154 405004 1 C T scaffold10173 ScafM SNP 0041.scaffold00154 405018 1 A C scaffold10173 ScafM SNP 0041.scaffold00154 405052 1 G C scaffold10173 ScafM SNP 0041.scaffold00154 405089 1 T C scaffold10173 ScafM SNP 0041.scaffold00154 405098 1 T A scaffold10173 ReadM SNP 0041.scaffold00154 406617 1 T C - ReadM SNP 0041.scaffold00154 406681 1 G A - ScafM INDEL 0041.scaffold00154 409948 1 A . scaffold10173 ScafM SNP 0041.scaffold00154 409967 1 G T scaffold10173 ScafM INDEL 0041.scaffold00154 409999 1 . T scaffold10173 ScafM SNP 0041.scaffold00154 410109 1 G T scaffold10173 ScafM SNP 0041.scaffold00154 410199 1 A G scaffold10173 ScafM SNP 0041.scaffold00154 410275 1 A G scaffold10173 ScafM SNP 0041.scaffold00154 410302 1 G T scaffold10173 ScafM INDEL 0041.scaffold00154 410335 1 T . scaffold10173 ScafM INDEL 0041.scaffold00154 410364 1 A . scaffold10173 ScafM SNP 0041.scaffold00154 410439 1 A C scaffold10173 ScafM SNP 0041.scaffold00154 410508 1 G T scaffold10173 ScafM SNP 0041.scaffold00154 410563 1 G A scaffold10173 ScafM SNP 0041.scaffold00154 410601 1 C T scaffold10173 ScafM SNP 0041.scaffold00154 410647 1 C T scaffold10173 ScafM SNP 0041.scaffold00154 410672 2 TT AA scaffold10173 ScafM INDEL 0041.scaffold00154 410683 2 .. AC scaffold10173 ScafM SNP 0041.scaffold00154 410706 1 G T scaffold10173 ScafM SNP 0041.scaffold00154 412506 1 C T scaffold5031 ScafM SNP 0041.scaffold00154 412609 1 A C scaffold5031 ScafM SNP 0041.scaffold00154 412639 1 A G scaffold5031 ScafM SNP 0041.scaffold00154 412667 3 GTT ACC scaffold5031 ScafM SNP 0041.scaffold00154 412694 1 T G scaffold5031 ScafM SNP 0041.scaffold00154 412700 1 C T scaffold5031 ScafM INDEL 0041.scaffold00154 412717 3 ... AAC scaffold5031 ScafM SNP 0041.scaffold00154 412750 1 G A scaffold5031 ScafM SNP 0041.scaffold00154 412765 1 G A scaffold5031 ScafM INDEL 0041.scaffold00154 412767 1 T . scaffold5031 ScafM SNP 0041.scaffold00154 412778 1 T A scaffold5031 ScafM SNP 0041.scaffold00154 412793 1 T A scaffold5031 ScafM SNP 0041.scaffold00154 412809 1 T C scaffold5031 ScafM SNP 0041.scaffold00154 412977 1 A C scaffold6332 ScafM SNP 0041.scaffold00154 412999 2 TC CA scaffold6332 ScafM SNP 0041.scaffold00154 413025 1 A T scaffold6332 ScafM SNP 0041.scaffold00154 413051 1 G A scaffold6332 ScafM SNP 0041.scaffold00154 413071 1 A G scaffold6332 ScafM SNP 0041.scaffold00154 413109 1 G A scaffold6332 ScafM SNP 0041.scaffold00154 413123 1 A C scaffold6332 ScafM SNP 0041.scaffold00154 413138 1 T G scaffold6332 ScafM SNP 0041.scaffold00154 413147 1 G A scaffold6332 ScafM SNP 0041.scaffold00154 413200 1 A G scaffold6332 ScafM SNP 0041.scaffold00154 413212 1 T G scaffold6332 ScafM INDEL 0041.scaffold00154 413234 1 . A scaffold6332 ScafM SNP 0041.scaffold00154 413303 1 T C scaffold6332 ScafM SNP 0041.scaffold00154 413310 1 A G scaffold6332 ScafM SNP 0041.scaffold00154 413324 1 C T scaffold6332 ScafM INDEL 0041.scaffold00154 413325 1 . G scaffold6332 ScafM SNP 0041.scaffold00154 413343 1 C T scaffold6332 ScafM SNP 0041.scaffold00154 413401 1 A G scaffold6332 ScafM SNP 0041.scaffold00154 413446 1 C T scaffold6332 ScafM INDEL 0041.scaffold00154 413486 3 GAC ... scaffold6332 ScafM SNP 0041.scaffold00154 413495 1 G T scaffold6332 ScafM SNP 0041.scaffold00154 413507 1 T A scaffold6332 ScafM SNP 0041.scaffold00154 413515 1 T C scaffold6332 ScafM SNP 0041.scaffold00154 413520 1 A G scaffold6332 ScafM SNP 0041.scaffold00154 413535 1 C T scaffold6332 ScafM SNP 0041.scaffold00154 413591 1 A T scaffold6332 ScafM SNP 0041.scaffold00154 413595 1 C T scaffold6332 ScafM SNP 0041.scaffold00154 413606 1 G A scaffold6332 ReadM SNP 0041.scaffold00154 414181 1 T G - ScafM SNP 0041.scaffold00154 415638 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 415651 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 415654 1 G T scaffold1721 ScafM SNP 0041.scaffold00154 415660 1 C T scaffold1721 ScafM SNP 0041.scaffold00154 415777 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 415798 1 T G scaffold12637 ScafM INDEL 0041.scaffold00154 415810 1 . A scaffold12637 ScafM INDEL 0041.scaffold00154 415816 5 ..... AAAAA scaffold12637 ScafM INDEL 0041.scaffold00154 415871 1 T . scaffold12637 ScafM SNP 0041.scaffold00154 415885 1 T A scaffold12637 ReadM SNP 0041.scaffold00154 416694 1 C A - ReadM SNP 0041.scaffold00154 416709 1 T A - ReadM INDEL 0041.scaffold00154 416752 1 G . - ReadM SNP 0041.scaffold00154 416863 1 C T - ScafM SNP 0041.scaffold00154 417632 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 417672 1 G C scaffold12637 ScafM SNP 0041.scaffold00154 417710 1 G C scaffold12637 ScafM SNP 0041.scaffold00154 417712 1 T G scaffold12637 ScafM SNP 0041.scaffold00154 417741 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 417756 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 417804 1 C A scaffold12637 ScafM SNP 0041.scaffold00154 417807 1 A C scaffold12637 ScafM SNP 0041.scaffold00154 417833 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 417856 1 C T scaffold12637 ScafM INDEL 0041.scaffold00154 417873 1 . T scaffold12637 ScafM SNP 0041.scaffold00154 417878 1 C A scaffold12637 ScafM INDEL 0041.scaffold00154 418619 3 ... TTT scaffold12637 ScafM SNP 0041.scaffold00154 418667 1 G A scaffold12637 ScafM INDEL 0041.scaffold00154 418689 7 ....... ATAATAT scaffold12637 ScafM SNP 0041.scaffold00154 418716 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 418754 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 418756 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 418779 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 418926 1 T A scaffold12637 ScafM SNP 0041.scaffold00154 418943 1 A C scaffold12637 ScafM SNP 0041.scaffold00154 418979 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 418989 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 419036 1 C T scaffold12637 Both SNP 0041.scaffold00154 419068 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 419085 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 419137 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 419148 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 419168 2 AC GG scaffold12637 ScafM SNP 0041.scaffold00154 419180 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 419196 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 419209 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 419253 1 C T scaffold12637 ScafM INDEL 0041.scaffold00154 419273 3 GGC ... scaffold12637 ScafM SNP 0041.scaffold00154 419301 3 TGG AAA scaffold12637 ScafM INDEL 0041.scaffold00154 419318 1 A . scaffold12637 ScafM SNP 0041.scaffold00154 419413 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 419417 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 419435 1 T C scaffold12637 ScafM INDEL 0041.scaffold00154 419438 1 T . scaffold12637 ScafM SNP 0041.scaffold00154 419463 1 C T scaffold12637 ScafM SNP 0041.scaffold00154 419598 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 419601 1 T C scaffold12637 ScafM INDEL 0041.scaffold00154 419612 2 AG .. scaffold12637 ScafM SNP 0041.scaffold00154 419615 1 G T scaffold12637 ScafM SNP 0041.scaffold00154 419653 1 A C scaffold12637 ScafM SNP 0041.scaffold00154 419716 1 G A scaffold12637 ScafM SNP 0041.scaffold00154 419741 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 419747 1 T A scaffold12637 ScafM SNP 0041.scaffold00154 419753 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 419773 3 ATT GAA scaffold12637 ScafM SNP 0041.scaffold00154 419787 1 A G scaffold12637 ScafM SNP 0041.scaffold00154 419803 1 G T scaffold12637 ScafM SNP 0041.scaffold00154 419811 2 CT AC scaffold12637 ScafM SNP 0041.scaffold00154 419814 1 T C scaffold12637 ScafM SNP 0041.scaffold00154 457300 1 G A scaffold16522 ScafM SNP 0041.scaffold00154 457327 1 T G scaffold16522 ScafM SNP 0041.scaffold00154 457347 1 A G scaffold16522 ScafM SNP 0041.scaffold00154 457371 1 T G scaffold16522 ScafM SNP 0041.scaffold00154 457414 1 A G scaffold16522 ScafM SNP 0041.scaffold00154 457438 1 T A scaffold16522 ScafM SNP 0041.scaffold00154 457441 1 A C scaffold16522 ScafM SNP 0041.scaffold00154 457457 1 C T scaffold16522 ScafM SNP 0041.scaffold00154 457468 1 T C scaffold16522 ScafM INDEL 0041.scaffold00154 457533 1 T . scaffold16522 ScafM SNP 0041.scaffold00154 457541 1 C T scaffold16522 ScafM SNP 0041.scaffold00154 457545 1 T A scaffold16522 ScafM SNP 0041.scaffold00154 457548 1 A G scaffold16522 ScafM SNP 0041.scaffold00154 457561 1 A G scaffold16522 ScafM SNP 0041.scaffold00154 457563 1 G A scaffold16522 ScafM SNP 0041.scaffold00154 457603 1 C G scaffold16522 ScafM SNP 0041.scaffold00154 457636 1 C A scaffold16522 ScafM SNP 0041.scaffold00154 457649 1 T G scaffold16522 ReadM SNP 0041.scaffold00154 465048 1 A G - ReadM SNP 0041.scaffold00154 473811 1 C G - ReadM SNP 0041.scaffold00154 473835 1 T A - ReadM SNP 0041.scaffold00154 473839 1 G C - ReadM SNP 0041.scaffold00154 474379 1 G A - ReadM SNP 0041.scaffold00154 474456 1 A G - ReadM SNP 0041.scaffold00154 474471 1 C T - ReadM SNP 0041.scaffold00154 474477 1 T C - ReadM SNP 0041.scaffold00154 474866 1 C G - ReadM SNP 0041.scaffold00154 474907 1 A C - ReadM SNP 0041.scaffold00154 474917 1 C T - ReadM SNP 0041.scaffold00154 474971 1 C T - ReadM SNP 0041.scaffold00154 474983 1 T G - ReadM SNP 0041.scaffold00154 475099 1 C G - ReadM SNP 0041.scaffold00154 475398 1 T C - ReadM SNP 0041.scaffold00154 475435 1 A T - ReadM SNP 0041.scaffold00154 475447 1 T A - ScafM SNP 0041.scaffold00154 476349 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 476361 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 476380 1 G T scaffold26472 ScafM INDEL 0041.scaffold00154 476420 2 .. CA scaffold26472 ScafM SNP 0041.scaffold00154 476436 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 476448 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 476467 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 476494 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 476516 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 476549 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 476553 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 476614 1 T C scaffold26472 ScafM INDEL 0041.scaffold00154 476618 1 . A scaffold26472 ScafM SNP 0041.scaffold00154 476628 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 476634 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 477194 2 TC AT scaffold8356 ScafM SNP 0041.scaffold00154 477202 1 A C scaffold8356 ReadM SNP 0041.scaffold00154 479413 1 A G - ReadM SNP 0041.scaffold00154 481627 1 G A - ReadM SNP 0041.scaffold00154 481708 1 T C - ReadM SNP 0041.scaffold00154 481719 1 G T - ReadM SNP 0041.scaffold00154 482083 1 G A - ReadM SNP 0041.scaffold00154 482206 1 T G - ReadM SNP 0041.scaffold00154 482631 2 GC TT - ReadM SNP 0041.scaffold00154 482660 1 A C - ScafM SNP 0041.scaffold00154 483324 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 483331 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 483354 11 ........... TAAAAGCCCCC scaffold26472 ScafM SNP 0041.scaffold00154 483381 1 T G scaffold26472 ScafM INDEL 0041.scaffold00154 483426 1 A . scaffold26472 ScafM SNP 0041.scaffold00154 483428 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 483446 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 483457 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 483472 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 483508 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 483524 1 T G scaffold26472 ScafM INDEL 0041.scaffold00154 483541 5 ..... TATTC scaffold26472 ScafM SNP 0041.scaffold00154 483596 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 483645 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 483686 1 G C scaffold26472 ScafM SNP 0041.scaffold00154 483695 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 483697 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 483728 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 483737 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 483777 2 AT GC scaffold26472 ScafM SNP 0041.scaffold00154 483795 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 483811 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 483818 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 483832 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 483837 2 TA AT scaffold26472 ScafM SNP 0041.scaffold00154 483865 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 483876 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 483880 1 C T scaffold26472 ReadM SNP 0041.scaffold00154 483969 1 A G - ReadM SNP 0041.scaffold00154 483980 1 T C - ScafM SNP 0041.scaffold00154 484036 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 484038 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 484072 1 G C scaffold26472 ScafM SNP 0041.scaffold00154 484075 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484082 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 484136 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 484177 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 484187 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484189 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 484239 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 484251 4 TGAA ..CT scaffold26472 ScafM SNP 0041.scaffold00154 484265 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484297 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484325 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484328 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484333 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484344 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484360 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 484366 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484375 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 484379 2 TC CT scaffold26472 ScafM SNP 0041.scaffold00154 484386 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 484390 1 A G scaffold26472 Both SNP 0041.scaffold00154 484513 1 T G scaffold26472 Both INDEL 0041.scaffold00154 484552 1 . A scaffold26472 ScafM SNP 0041.scaffold00154 484568 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 484577 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 484591 1 G C scaffold26472 ScafM SNP 0041.scaffold00154 484597 1 A T scaffold26472 ScafM INDEL 0041.scaffold00154 484610 1 . T scaffold26472 ScafM SNP 0041.scaffold00154 484637 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484656 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 484659 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 484676 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 484678 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 484697 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 484725 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 484730 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 484733 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 484738 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 484741 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 484765 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 484792 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 484819 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 484838 1 . G scaffold26472 ScafM SNP 0041.scaffold00154 484842 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 484856 1 T C scaffold26472 Both SNP 0041.scaffold00154 484862 1 G T scaffold26472 Both SNP 0041.scaffold00154 484969 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485015 2 GC AT scaffold26472 ScafM SNP 0041.scaffold00154 485069 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 485085 1 T . scaffold26472 ScafM SNP 0041.scaffold00154 485091 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 485101 2 AC GA scaffold26472 ScafM SNP 0041.scaffold00154 485118 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 485120 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 485125 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 485141 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 485153 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 485156 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485164 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 485182 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 485199 2 GT AC scaffold26472 ScafM SNP 0041.scaffold00154 485207 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485220 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 485222 1 A C scaffold26472 Both SNP 0041.scaffold00154 485314 1 T C scaffold26472 Both SNP 0041.scaffold00154 485327 1 A T scaffold26472 Both SNP 0041.scaffold00154 485374 1 T C scaffold26472 Both SNP 0041.scaffold00154 485395 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485445 1 T A scaffold26472 ScafM INDEL 0041.scaffold00154 485452 2 AT .. scaffold26472 ScafM SNP 0041.scaffold00154 485501 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 485546 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 485553 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 485573 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 485587 1 G A scaffold26472 Both SNP 0041.scaffold00154 485646 1 A G scaffold26472 Both SNP 0041.scaffold00154 485693 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485718 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485724 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 485734 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 485752 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485771 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 485787 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 485795 1 A G scaffold26472 Both SNP 0041.scaffold00154 485849 1 C G scaffold26472 Both SNP 0041.scaffold00154 485878 1 G A scaffold26472 ReadM INDEL 0041.scaffold00154 485909 1 . A - ScafM INDEL 0041.scaffold00154 485909 2 .G AC scaffold26472 ScafM SNP 0041.scaffold00154 485978 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485980 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 485982 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 485984 2 GC TT scaffold26472 ScafM SNP 0041.scaffold00154 485987 2 CG TT scaffold26472 ScafM SNP 0041.scaffold00154 485997 2 GG TT scaffold26472 ScafM SNP 0041.scaffold00154 486009 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 486316 1 G A scaffold26472 Both SNP 0041.scaffold00154 486407 1 G T scaffold26472 Both SNP 0041.scaffold00154 486412 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 486475 1 G C scaffold26472 ScafM SNP 0041.scaffold00154 486497 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 486524 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 486531 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 486558 1 A G scaffold26472 ReadM SNP 0041.scaffold00154 486627 1 C T - ScafM SNP 0041.scaffold00154 487571 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 487602 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 487625 1 C T scaffold26472 Both SNP 0041.scaffold00154 487642 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 487773 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 487779 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 487782 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 487789 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 487807 1 A T scaffold26472 Both SNP 0041.scaffold00154 487843 1 G T scaffold26472 Both SNP 0041.scaffold00154 487851 1 G A scaffold26472 Both SNP 0041.scaffold00154 487896 1 G A scaffold26472 ScafM INDEL 0041.scaffold00154 487929 1 A . scaffold26472 ScafM INDEL 0041.scaffold00154 487953 1 . T scaffold26472 Both SNP 0041.scaffold00154 487973 1 A C scaffold26472 Both SNP 0041.scaffold00154 487992 1 A G scaffold26472 Both SNP 0041.scaffold00154 488044 1 A G scaffold26472 Both SNP 0041.scaffold00154 488066 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 488089 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 488138 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 488157 7 TATTGAG ....... scaffold26472 ScafM INDEL 0041.scaffold00154 488166 1 A . scaffold26472 ScafM SNP 0041.scaffold00154 488182 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 488186 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 488237 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 488259 1 T . scaffold26472 ScafM SNP 0041.scaffold00154 488318 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 488321 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 489335 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 489412 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 489454 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 489492 1 T C scaffold26472 ReadM SNP 0041.scaffold00154 489808 1 C T - ReadM SNP 0041.scaffold00154 489868 1 A G - ScafM SNP 0041.scaffold00154 490166 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 490184 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 490197 1 T A scaffold26472 ScafM INDEL 0041.scaffold00154 490226 3 ... TTT scaffold26472 ScafM SNP 0041.scaffold00154 490228 1 G T scaffold26472 ScafM INDEL 0041.scaffold00154 490238 4 TAAT .... scaffold26472 ScafM INDEL 0041.scaffold00154 490292 1 T . scaffold26472 ScafM INDEL 0041.scaffold00154 490343 1 . C scaffold26472 ScafM SNP 0041.scaffold00154 490354 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 490360 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 490371 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 490381 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 490389 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 490402 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 490423 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 490441 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 490447 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 490468 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 490474 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 490486 1 T . scaffold26472 ScafM SNP 0041.scaffold00154 490517 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 490526 17 ................. TCATCCTAATCTAATGC scaffold26472 ScafM SNP 0041.scaffold00154 490537 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 490570 1 T G scaffold26472 ReadM SNP 0041.scaffold00154 491049 1 A G - ReadM SNP 0041.scaffold00154 491067 1 A G - ReadM SNP 0041.scaffold00154 491298 1 A C - ReadM SNP 0041.scaffold00154 491307 1 A G - ReadM SNP 0041.scaffold00154 491336 1 G A - ReadM SNP 0041.scaffold00154 491351 1 T A - ReadM SNP 0041.scaffold00154 491388 1 G A - ReadM SNP 0041.scaffold00154 491448 1 G C - ReadM SNP 0041.scaffold00154 491684 1 G C - ReadM SNP 0041.scaffold00154 491710 1 G C - ReadM SNP 0041.scaffold00154 491751 1 G A - ScafM SNP 0041.scaffold00154 493545 2 TA CG scaffold26472 ScafM SNP 0041.scaffold00154 493556 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 493558 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 493605 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 493994 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 494024 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 494026 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 494029 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 494193 1 C A scaffold26472 ScafM INDEL 0041.scaffold00154 494198 1 . C scaffold26472 ScafM SNP 0041.scaffold00154 494211 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 494213 1 T C scaffold26472 ScafM INDEL 0041.scaffold00154 494226 1 . C scaffold26472 ScafM SNP 0041.scaffold00154 494258 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 494260 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 494267 1 T C scaffold26472 Both SNP 0041.scaffold00154 494297 1 A G scaffold26472 Both SNP 0041.scaffold00154 494367 1 G T scaffold26472 ScafM SNP 0041.scaffold00154 494373 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 494410 2 CA GG scaffold26472 ScafM SNP 0041.scaffold00154 494423 1 C T scaffold26472 Both SNP 0041.scaffold00154 494448 1 C G scaffold26472 Both SNP 0041.scaffold00154 494522 1 C G scaffold26472 ReadM SNP 0041.scaffold00154 494639 1 T A - ReadM SNP 0041.scaffold00154 494646 1 A G - ScafM INDEL 0041.scaffold00154 494812 1 A . scaffold26472 ScafM SNP 0041.scaffold00154 494821 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 494845 1 A G scaffold26472 ScafM INDEL 0041.scaffold00154 494918 11 ........... TTATAGAAGAG scaffold26472 Both SNP 0041.scaffold00154 494964 1 G T scaffold26472 Both SNP 0041.scaffold00154 495029 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 495063 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 495065 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 495069 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 495074 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 495079 3 CGT GAG scaffold26472 ScafM INDEL 0041.scaffold00154 495095 1 . T scaffold26472 ScafM INDEL 0041.scaffold00154 495096 3 ... CAT scaffold26472 ScafM SNP 0041.scaffold00154 495100 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 495119 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 495124 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 495149 2 AC CT scaffold26472 ScafM SNP 0041.scaffold00154 495153 2 AA TT scaffold26472 ScafM SNP 0041.scaffold00154 495156 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 495158 1 G A scaffold26472 ScafM INDEL 0041.scaffold00154 495160 1 . C scaffold26472 ScafM SNP 0041.scaffold00154 495173 1 T C scaffold26472 ReadM INDEL 0041.scaffold00154 495269 1 . A - ReadM SNP 0041.scaffold00154 495295 1 T C - ReadM SNP 0041.scaffold00154 495321 1 G A - Both SNP 0041.scaffold00154 495483 1 A T scaffold26472 Both SNP 0041.scaffold00154 495494 1 G T scaffold26472 Both SNP 0041.scaffold00154 495503 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 495529 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 495557 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 495565 1 C T scaffold26472 Both SNP 0041.scaffold00154 495591 1 G T scaffold26472 Both SNP 0041.scaffold00154 495621 1 A G scaffold26472 Both SNP 0041.scaffold00154 495694 2 TT CC scaffold26472 Both SNP 0041.scaffold00154 495739 1 G T scaffold26472 ScafM INDEL 0041.scaffold00154 495777 6 TTGAAC ...... scaffold26472 Both SNP 0041.scaffold00154 496655 1 A G scaffold26472 Both SNP 0041.scaffold00154 496778 1 G C scaffold26472 Both INDEL 0041.scaffold00154 496818 1 . T scaffold26472 Both SNP 0041.scaffold00154 496870 1 G A scaffold26472 ReadM SNP 0041.scaffold00154 497108 1 C T - Both SNP 0041.scaffold00154 497206 1 G T scaffold26472 Both SNP 0041.scaffold00154 498335 1 A G scaffold26472 Both SNP 0041.scaffold00154 498347 1 A C scaffold26472 ScafM INDEL 0041.scaffold00154 498468 2 .. AA scaffold26472 ReadM SNP 0041.scaffold00154 498584 1 G T - ReadM SNP 0041.scaffold00154 498608 1 C T - ReadM SNP 0041.scaffold00154 498921 1 C T - ScafM INDEL 0041.scaffold00154 498971 4 TACG .... scaffold26472 Both SNP 0041.scaffold00154 499014 1 C T scaffold26472 Both SNP 0041.scaffold00154 499066 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 499142 1 G T scaffold26472 ScafM INDEL 0041.scaffold00154 499153 4 .... TCGG scaffold26472 Both SNP 0041.scaffold00154 499236 1 T G scaffold26472 Both INDEL 0041.scaffold00154 499247 1 C . scaffold26472 ScafM SNP 0041.scaffold00154 499252 1 C T scaffold26472 Both SNP 0041.scaffold00154 499290 1 A C scaffold26472 ReadM SNP 0041.scaffold00154 499582 1 T G - ReadM SNP 0041.scaffold00154 499749 1 A C - ReadM INDEL 0041.scaffold00154 499980 1 . T - Both SNP 0041.scaffold00154 500067 1 G C scaffold26472 Both SNP 0041.scaffold00154 500128 1 C G scaffold26472 Both SNP 0041.scaffold00154 500199 1 A C scaffold26472 Both SNP 0041.scaffold00154 500312 1 T C scaffold26472 Both SNP 0041.scaffold00154 500720 1 T A scaffold26472 ScafM INDEL 0041.scaffold00154 500953 4 .... TAAC scaffold26472 ScafM INDEL 0041.scaffold00154 501013 1 . T scaffold26472 ScafM SNP 0041.scaffold00154 501043 1 G C scaffold26472 ScafM SNP 0041.scaffold00154 501046 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 501049 1 T G scaffold26472 ScafM SNP 0041.scaffold00154 501065 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 501069 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 501080 2 AT GC scaffold26472 ScafM INDEL 0041.scaffold00154 501102 1 . C scaffold26472 ReadM SNP 0041.scaffold00154 501481 1 C T - ReadM SNP 0041.scaffold00154 501484 1 C T - ReadM SNP 0041.scaffold00154 501653 1 A T - ReadM SNP 0041.scaffold00154 501719 1 T A - ReadM SNP 0041.scaffold00154 501723 1 A C - ReadM SNP 0041.scaffold00154 501779 1 C T - ReadM SNP 0041.scaffold00154 501827 1 C T - ReadM SNP 0041.scaffold00154 502441 1 T C - ScafM SNP 0041.scaffold00154 502889 1 T C scaffold26472 ScafM INDEL 0041.scaffold00154 502922 9 ACTCATATG ......... scaffold26472 ScafM SNP 0041.scaffold00154 502966 1 T A scaffold26472 Both SNP 0041.scaffold00154 503083 1 C A scaffold26472 ReadM INDEL 0041.scaffold00154 503122 1 T . - Both SNP 0041.scaffold00154 503161 1 A G scaffold26472 ReadM SNP 0041.scaffold00154 503255 1 A G - ReadM SNP 0041.scaffold00154 503333 1 G A - ReadM INDEL 0041.scaffold00154 503465 2 AG .. - ScafM SNP 0041.scaffold00154 503501 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 503516 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 503744 1 C G scaffold26472 ReadM SNP 0041.scaffold00154 504763 1 C T - ReadM SNP 0041.scaffold00154 504777 1 C T - ReadM SNP 0041.scaffold00154 505225 1 A G - ReadM SNP 0041.scaffold00154 505260 1 G A - ReadM SNP 0041.scaffold00154 505293 1 A C - ScafM INDEL 0041.scaffold00154 505397 1 T . scaffold26472 ScafM INDEL 0041.scaffold00154 505408 2 CT .. scaffold26472 ScafM SNP 0041.scaffold00154 505580 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 505584 1 G T scaffold26472 ScafM INDEL 0041.scaffold00154 505585 2 .. TT scaffold26472 ScafM INDEL 0041.scaffold00154 505619 3 .CC TAA scaffold26472 ScafM SNP 0041.scaffold00154 505759 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 505838 1 A T scaffold26472 ScafM SNP 0041.scaffold00154 505845 1 C A scaffold26472 Both SNP 0041.scaffold00154 505856 1 T A scaffold26472 ScafM SNP 0041.scaffold00154 505995 1 C A scaffold26472 ScafM SNP 0041.scaffold00154 506175 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 506220 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 506499 1 C G scaffold26472 ScafM INDEL 0041.scaffold00154 506517 1 . A scaffold26472 ScafM SNP 0041.scaffold00154 506531 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 506631 1 A C scaffold26472 ScafM SNP 0041.scaffold00154 506787 1 G A scaffold26472 ScafM SNP 0041.scaffold00154 506829 2 TA CT scaffold26472 ScafM SNP 0041.scaffold00154 506875 1 C T scaffold26472 ScafM INDEL 0041.scaffold00154 507234 1 . G scaffold26472 ScafM SNP 0041.scaffold00154 507331 1 T C scaffold26472 ScafM SNP 0041.scaffold00154 507351 1 C T scaffold26472 ScafM INDEL 0041.scaffold00154 507370 1 . T scaffold26472 ScafM INDEL 0041.scaffold00154 507530 1 . T scaffold26472 ScafM SNP 0041.scaffold00154 507545 1 T A scaffold26472 ScafM INDEL 0041.scaffold00154 507559 3 ... TAA scaffold26472 ScafM SNP 0041.scaffold00154 507588 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 507708 1 C G scaffold26472 ScafM SNP 0041.scaffold00154 507757 2 CA AC scaffold26472 Both SNP 0041.scaffold00154 507841 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 508088 2 TT CA scaffold26472 ScafM SNP 0041.scaffold00154 508093 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 508096 1 C T scaffold26472 ScafM SNP 0041.scaffold00154 508109 1 A G scaffold26472 ReadM SNP 0041.scaffold00154 508273 1 C T - ReadM SNP 0041.scaffold00154 508474 1 G A - ReadM SNP 0041.scaffold00154 508525 1 C T - ReadM SNP 0041.scaffold00154 508538 1 A G - Both SNP 0041.scaffold00154 508697 1 A G scaffold26472 ScafM SNP 0041.scaffold00154 508732 2 AG TA scaffold26472 ReadM SNP 0041.scaffold00154 508864 1 C A - ReadM SNP 0041.scaffold00154 508873 1 G A - ReadM INDEL 0041.scaffold00154 508946 1 A . - ReadM SNP 0041.scaffold00154 508957 1 T A - ReadM INDEL 0041.scaffold00154 508991 1 . A - ReadM SNP 0041.scaffold00154 509038 1 C G - ReadM SNP 0041.scaffold00154 509043 1 A G - ReadM SNP 0041.scaffold00154 509097 1 G A - ReadM SNP 0041.scaffold00154 509115 1 G A - ReadM SNP 0041.scaffold00154 509166 1 G A - ReadM SNP 0041.scaffold00154 509176 1 C T - ReadM SNP 0041.scaffold00154 509359 1 A G - ReadM SNP 0041.scaffold00154 509512 1 G A - ReadM SNP 0041.scaffold00154 509516 1 C G - ReadM SNP 0041.scaffold00154 509566 1 C T - ReadM SNP 0041.scaffold00154 509633 1 C T - ReadM SNP 0041.scaffold00154 509685 1 C T - ReadM SNP 0041.scaffold00154 509774 1 T C - ReadM SNP 0041.scaffold00154 509791 1 G T - ReadM SNP 0041.scaffold00154 509982 1 C T - ReadM SNP 0041.scaffold00154 510091 1 T A - ReadM SNP 0041.scaffold00154 510141 1 G A - ReadM SNP 0041.scaffold00154 510403 1 G A - ReadM SNP 0041.scaffold00154 510438 1 A T - ReadM SNP 0041.scaffold00154 510459 1 A G - ReadM SNP 0041.scaffold00154 510552 1 G T - ReadM SNP 0041.scaffold00154 510617 1 G A - ReadM SNP 0041.scaffold00154 510720 1 T C - ReadM SNP 0041.scaffold00154 510857 1 A C - ReadM SNP 0041.scaffold00154 510890 1 C T - ReadM SNP 0041.scaffold00154 510927 1 T G - ReadM SNP 0041.scaffold00154 511041 1 C T - ReadM SNP 0041.scaffold00154 511082 1 T C - ReadM SNP 0041.scaffold00154 511131 1 T C - ReadM SNP 0041.scaffold00154 511194 1 C T - ReadM SNP 0041.scaffold00154 511246 1 G C - ReadM SNP 0041.scaffold00154 511312 1 G C - ReadM SNP 0041.scaffold00154 511324 1 T A - ReadM SNP 0041.scaffold00154 511394 1 T C - ReadM SNP 0041.scaffold00154 519753 1 T G - ReadM SNP 0041.scaffold00154 519771 1 T C - ReadM SNP 0041.scaffold00154 522809 1 A G - ReadM SNP 0041.scaffold00154 522822 1 C T - ReadM SNP 0041.scaffold00154 522866 1 T C - ReadM SNP 0041.scaffold00154 523089 1 T G - ReadM SNP 0041.scaffold00154 523145 1 T C - ReadM SNP 0041.scaffold00154 523150 1 T G - ReadM SNP 0041.scaffold00154 523215 1 A G - ReadM SNP 0041.scaffold00154 523242 1 G A - ReadM SNP 0041.scaffold00154 523261 1 T G - ReadM INDEL 0041.scaffold00154 523290 1 A . - ReadM SNP 0041.scaffold00154 523322 1 T C - ReadM SNP 0041.scaffold00154 523366 1 G A - ReadM SNP 0041.scaffold00154 523543 1 T G - ReadM SNP 0041.scaffold00154 523555 1 G C - ReadM SNP 0041.scaffold00154 523652 1 C G - ReadM SNP 0041.scaffold00154 523667 1 G C - ReadM SNP 0041.scaffold00154 523686 1 T G - ScafM SNP 0041.scaffold00154 523765 1 C T scaffold22388 ScafM SNP 0041.scaffold00154 523789 1 A G scaffold22388 ScafM SNP 0041.scaffold00154 523803 2 TC CG scaffold22388 ScafM SNP 0041.scaffold00154 523819 1 A G scaffold22388 ScafM SNP 0041.scaffold00154 523825 1 T A scaffold22388 ReadM SNP 0041.scaffold00154 523943 1 A G - Both SNP 0041.scaffold00154 524069 1 C G scaffold22388 Both SNP 0041.scaffold00154 524102 1 A T scaffold22388 ScafM INDEL 0041.scaffold00154 524211 5 TAATT ..... scaffold22388 ScafM SNP 0041.scaffold00154 524220 1 C T scaffold22388 ScafM SNP 0041.scaffold00154 524252 1 C G scaffold22388 ScafM SNP 0041.scaffold00154 524263 1 G A scaffold22388 ScafM SNP 0041.scaffold00154 524289 1 T C scaffold22388 ScafM SNP 0041.scaffold00154 524567 1 T C scaffold22388 ScafM SNP 0041.scaffold00154 524580 1 A G scaffold22388 ScafM INDEL 0041.scaffold00154 526135 2 .. GT scaffold22388 ScafM SNP 0041.scaffold00154 526256 1 G T scaffold22388 ScafM SNP 0041.scaffold00154 526282 1 A C scaffold22388 Both SNP 0041.scaffold00154 526348 1 C G scaffold22388 ScafM SNP 0041.scaffold00154 526376 1 C T scaffold22388 ScafM INDEL 0041.scaffold00154 526420 1 C . scaffold22388 ScafM INDEL 0041.scaffold00154 526424 1 C . scaffold22388 ScafM SNP 0041.scaffold00154 526442 1 C G scaffold22388 ScafM INDEL 0041.scaffold00154 526468 1 . T scaffold22388 ReadM SNP 0041.scaffold00154 529551 1 A C - ReadM SNP 0041.scaffold00154 529573 1 A G - ReadM SNP 0041.scaffold00154 533613 1 A G - ReadM SNP 0041.scaffold00154 533810 1 T C - ReadM SNP 0041.scaffold00154 533861 1 T G - ReadM SNP 0041.scaffold00154 534030 1 G A - ReadM SNP 0041.scaffold00154 534081 1 T C - ReadM SNP 0041.scaffold00154 534100 1 G A - ReadM SNP 0041.scaffold00154 534244 1 T C - ReadM SNP 0041.scaffold00154 534267 1 A G - ReadM SNP 0041.scaffold00154 534272 1 C T - ReadM INDEL 0041.scaffold00154 534296 1 A . - ReadM SNP 0041.scaffold00154 534486 1 A G - ReadM SNP 0041.scaffold00154 534554 1 C A - ReadM SNP 0041.scaffold00154 534566 1 C T - ReadM SNP 0041.scaffold00154 534604 1 T C - ReadM SNP 0041.scaffold00154 534619 1 T G - ReadM SNP 0041.scaffold00154 534782 1 C T - ReadM SNP 0041.scaffold00154 534805 1 T C - ReadM SNP 0041.scaffold00154 534850 1 G A - ReadM SNP 0041.scaffold00154 534860 1 A G - ReadM SNP 0041.scaffold00154 534881 1 A G - ReadM SNP 0041.scaffold00154 534991 1 A G - ReadM SNP 0041.scaffold00154 535063 1 C T - ReadM SNP 0041.scaffold00154 535071 1 A G - ReadM SNP 0041.scaffold00154 535248 1 T G - ReadM SNP 0041.scaffold00154 535726 1 T C - ReadM SNP 0041.scaffold00154 535736 1 G T - ReadM SNP 0041.scaffold00154 535874 1 G A - ReadM SNP 0041.scaffold00154 535899 1 T C - ReadM SNP 0041.scaffold00154 535955 1 T A - ReadM SNP 0041.scaffold00154 536104 1 G A - ReadM SNP 0041.scaffold00154 536172 1 C T - ReadM SNP 0041.scaffold00154 536199 1 T G - ReadM INDEL 0041.scaffold00154 536212 1 . C - ReadM SNP 0041.scaffold00154 536249 1 G A - ReadM SNP 0041.scaffold00154 536334 1 A G - ReadM SNP 0041.scaffold00154 536411 1 A G - ReadM SNP 0041.scaffold00154 536420 1 T C - ReadM SNP 0041.scaffold00154 536546 1 A G - Both SNP 0041.scaffold00154 536567 1 A T scaffold4406 Both SNP 0041.scaffold00154 536598 1 T A scaffold4406 ReadM SNP 0041.scaffold00154 536660 1 C G - ReadM SNP 0041.scaffold00154 536669 1 G T - ReadM SNP 0041.scaffold00154 536683 1 T C - ReadM SNP 0041.scaffold00154 536812 2 TT CA - ReadM SNP 0041.scaffold00154 536879 1 G C - ReadM INDEL 0041.scaffold00154 536948 1 A . - ReadM SNP 0041.scaffold00154 537001 1 C T - ReadM INDEL 0041.scaffold00154 537010 1 . G - ReadM SNP 0041.scaffold00154 537159 1 G A - ReadM SNP 0041.scaffold00154 537188 1 C T - ReadM SNP 0041.scaffold00154 537220 1 A G - ReadM SNP 0041.scaffold00154 537241 1 G T - ReadM SNP 0041.scaffold00154 537245 1 A T - ReadM SNP 0041.scaffold00154 537316 1 T C - ReadM SNP 0041.scaffold00154 537329 1 C T - ReadM SNP 0041.scaffold00154 537388 1 A G - ReadM SNP 0041.scaffold00154 537432 1 G C - ReadM SNP 0041.scaffold00154 537556 1 G A - ReadM SNP 0041.scaffold00154 537564 1 T C - ReadM INDEL 0041.scaffold00154 537582 1 A . - ReadM SNP 0041.scaffold00154 537769 1 G A - ReadM SNP 0041.scaffold00154 537799 1 T C - ReadM SNP 0041.scaffold00154 537811 1 C T - ReadM SNP 0041.scaffold00154 537818 1 T C - ReadM SNP 0041.scaffold00154 537935 1 T G - ReadM SNP 0041.scaffold00154 537956 1 C T - ReadM SNP 0041.scaffold00154 538160 1 G A - ReadM SNP 0041.scaffold00154 538182 1 T A - ReadM SNP 0041.scaffold00154 538192 1 T A - ReadM SNP 0041.scaffold00154 538362 1 C T - ReadM SNP 0041.scaffold00154 538536 1 G A - ReadM SNP 0041.scaffold00154 538541 1 C T - ReadM SNP 0041.scaffold00154 538615 1 A G - ReadM SNP 0041.scaffold00154 538626 1 C T - ReadM SNP 0041.scaffold00154 538706 1 C G - ReadM SNP 0041.scaffold00154 538731 1 G T - Both SNP 0041.scaffold00154 538786 1 G C scaffold4406 Both SNP 0041.scaffold00154 538841 1 A G scaffold4406 Both SNP 0041.scaffold00154 538851 1 C T scaffold4406 ReadM SNP 0041.scaffold00154 538960 1 C T - ReadM SNP 0041.scaffold00154 538995 1 G A - Both SNP 0041.scaffold00154 539238 1 T C scaffold4406 Both SNP 0041.scaffold00154 539279 1 A C scaffold4406 Both SNP 0041.scaffold00154 539371 1 T C scaffold4406 Both SNP 0041.scaffold00154 539487 1 A G scaffold4406 Both SNP 0041.scaffold00154 539498 1 A G scaffold4406 Both SNP 0041.scaffold00154 539634 1 A G scaffold4406 Both SNP 0041.scaffold00154 539756 1 A G scaffold4406 Both SNP 0041.scaffold00154 539796 1 G A scaffold4406 Both SNP 0041.scaffold00154 539891 1 A C scaffold4406 Both SNP 0041.scaffold00154 539940 1 T C scaffold4406 ReadM SNP 0041.scaffold00154 540018 1 T A - Both SNP 0041.scaffold00154 540068 1 T C scaffold4406 Both SNP 0041.scaffold00154 540077 1 T C scaffold4406 Both SNP 0041.scaffold00154 540101 1 A G scaffold4406 Both SNP 0041.scaffold00154 540320 1 C T scaffold4406 Both SNP 0041.scaffold00154 540334 1 C T scaffold4406 Both SNP 0041.scaffold00154 540344 1 C G scaffold4406 Both SNP 0041.scaffold00154 540433 1 T G scaffold4406 Both SNP 0041.scaffold00154 540451 1 C A scaffold4406 Both SNP 0041.scaffold00154 540528 1 A G scaffold4406 Both SNP 0041.scaffold00154 540633 1 G C scaffold4406 Both SNP 0041.scaffold00154 540726 1 G C scaffold4406 Both SNP 0041.scaffold00154 540785 1 A T scaffold4406 Both SNP 0041.scaffold00154 540897 1 G A scaffold4406 Both SNP 0041.scaffold00154 540908 1 A T scaffold4406 Both SNP 0041.scaffold00154 540923 1 T A scaffold4406 Both SNP 0041.scaffold00154 540991 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 541019 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 541027 3 ... AAA scaffold4406 ScafM INDEL 0041.scaffold00154 541036 3 AAA ... scaffold4406 Both SNP 0041.scaffold00154 541130 1 A C scaffold4406 Both SNP 0041.scaffold00154 541188 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 541193 1 G A scaffold4406 Both SNP 0041.scaffold00154 541216 1 T C scaffold4406 Both INDEL 0041.scaffold00154 541338 1 C . scaffold4406 Both SNP 0041.scaffold00154 541401 1 C T scaffold4406 Both SNP 0041.scaffold00154 541406 1 A G scaffold4406 Both SNP 0041.scaffold00154 541519 1 A G scaffold4406 Both SNP 0041.scaffold00154 541557 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 541569 1 G A scaffold4406 Both SNP 0041.scaffold00154 541610 1 G A scaffold4406 Both SNP 0041.scaffold00154 541678 1 T A scaffold4406 Both SNP 0041.scaffold00154 541732 1 T A scaffold4406 Both SNP 0041.scaffold00154 541765 1 C A scaffold4406 Both SNP 0041.scaffold00154 541784 1 T C scaffold4406 ReadM SNP 0041.scaffold00154 541832 1 C T - ReadM SNP 0041.scaffold00154 541856 1 C T - ReadM SNP 0041.scaffold00154 541872 1 A T - ReadM SNP 0041.scaffold00154 541951 1 T C - ReadM SNP 0041.scaffold00154 541986 1 T G - ReadM SNP 0041.scaffold00154 542172 1 C G - ReadM SNP 0041.scaffold00154 542239 1 A G - ReadM SNP 0041.scaffold00154 542375 1 G A - ReadM SNP 0041.scaffold00154 542416 1 T A - ReadM SNP 0041.scaffold00154 542446 1 G T - ReadM SNP 0041.scaffold00154 542494 1 T G - ReadM SNP 0041.scaffold00154 542509 1 T C - ReadM SNP 0041.scaffold00154 542535 1 T C - ReadM SNP 0041.scaffold00154 542659 1 C T - ReadM SNP 0041.scaffold00154 542692 1 T C - ReadM INDEL 0041.scaffold00154 542846 1 . A - ReadM SNP 0041.scaffold00154 542923 1 G T - ReadM SNP 0041.scaffold00154 542961 1 A G - ReadM SNP 0041.scaffold00154 542984 1 A G - ReadM INDEL 0041.scaffold00154 543173 1 C . - ReadM SNP 0041.scaffold00154 543185 1 A G - ReadM SNP 0041.scaffold00154 543243 1 A T - ReadM SNP 0041.scaffold00154 543297 1 T C - Both SNP 0041.scaffold00154 543338 1 T C scaffold4406 Both SNP 0041.scaffold00154 543491 1 C T scaffold4406 Both SNP 0041.scaffold00154 543507 1 C T scaffold4406 Both SNP 0041.scaffold00154 543519 1 C T scaffold4406 Both SNP 0041.scaffold00154 543544 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 543653 1 T C scaffold4406 Both SNP 0041.scaffold00154 543683 1 T C scaffold4406 Both SNP 0041.scaffold00154 543708 1 A C scaffold4406 Both SNP 0041.scaffold00154 543756 1 A G scaffold4406 Both SNP 0041.scaffold00154 543803 1 G C scaffold4406 Both SNP 0041.scaffold00154 543846 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 543905 2 TC GT scaffold4406 Both SNP 0041.scaffold00154 543936 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 543986 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 544023 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 544085 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 544090 2 CG TA scaffold4406 ScafM SNP 0041.scaffold00154 544217 1 G A scaffold4406 ScafM INDEL 0041.scaffold00154 544226 1 . G scaffold4406 ScafM SNP 0041.scaffold00154 548041 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 548141 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 548166 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 548185 1 T A scaffold4406 ScafM INDEL 0041.scaffold00154 548209 19 CTTCAAATTAAACTTCTTC ................... scaffold4406 ScafM SNP 0041.scaffold00154 548235 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 548305 1 . T scaffold4406 ScafM INDEL 0041.scaffold00154 548320 1 . T scaffold4406 ScafM SNP 0041.scaffold00154 548390 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 548399 2 CA AT scaffold4406 ScafM SNP 0041.scaffold00154 548409 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 548428 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 548430 1 A C scaffold4406 ScafM INDEL 0041.scaffold00154 548481 1 . A scaffold4406 Both SNP 0041.scaffold00154 548574 1 A C scaffold4406 Both SNP 0041.scaffold00154 548608 1 A T scaffold4406 Both SNP 0041.scaffold00154 548633 1 A G scaffold4406 Both SNP 0041.scaffold00154 548649 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 548711 1 C A scaffold4406 Both SNP 0041.scaffold00154 548742 1 C G scaffold4406 Both SNP 0041.scaffold00154 548826 1 T C scaffold4406 Both SNP 0041.scaffold00154 548843 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 548873 1 . A scaffold4406 ScafM SNP 0041.scaffold00154 548887 1 C T scaffold4406 ScafM INDEL 0041.scaffold00154 548908 66 GTCCCATCTGTCGCTGCCTCTGGGCACAGGTGGATTCTCGATAGAGAACCGGGGGAGGGATCTGTC .................................................................. scaffold4406 ScafM INDEL 0041.scaffold00154 548975 2 CG .. scaffold4406 Both SNP 0041.scaffold00154 549077 1 A T scaffold4406 Both SNP 0041.scaffold00154 549085 1 A T scaffold4406 Both SNP 0041.scaffold00154 549137 1 A G scaffold4406 Both SNP 0041.scaffold00154 549163 1 T A scaffold4406 Both INDEL 0041.scaffold00154 549192 1 A . scaffold4406 Both SNP 0041.scaffold00154 549450 1 A G scaffold4406 ReadM SNP 0041.scaffold00154 549530 1 A T - ReadM SNP 0041.scaffold00154 549573 1 G A - Both SNP 0041.scaffold00154 549630 1 C T scaffold4406 Both SNP 0041.scaffold00154 549635 1 A G scaffold4406 Both SNP 0041.scaffold00154 549641 1 G A scaffold4406 Both SNP 0041.scaffold00154 549735 1 C T scaffold4406 Both SNP 0041.scaffold00154 549743 1 A G scaffold4406 Both SNP 0041.scaffold00154 549781 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 549821 1 G C scaffold4406 Both SNP 0041.scaffold00154 549825 1 A G scaffold4406 Both SNP 0041.scaffold00154 549863 1 A G scaffold4406 Both SNP 0041.scaffold00154 549900 1 C G scaffold4406 Both INDEL 0041.scaffold00154 549979 1 T . scaffold4406 ScafM SNP 0041.scaffold00154 549982 1 A G scaffold4406 Both SNP 0041.scaffold00154 550045 1 A G scaffold4406 Both SNP 0041.scaffold00154 550067 1 A C scaffold4406 Both SNP 0041.scaffold00154 550086 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 550208 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 550210 1 G T scaffold4406 Both SNP 0041.scaffold00154 550232 1 A G scaffold4406 Both SNP 0041.scaffold00154 550290 1 C T scaffold4406 Both SNP 0041.scaffold00154 550298 1 C T scaffold4406 Both INDEL 0041.scaffold00154 550383 1 . T scaffold4406 Both SNP 0041.scaffold00154 550508 1 A T scaffold4406 ReadM SNP 0041.scaffold00154 550563 1 G A - ReadM SNP 0041.scaffold00154 550567 1 C T - Both SNP 0041.scaffold00154 550653 1 C T scaffold4406 Both SNP 0041.scaffold00154 550682 1 C T scaffold4406 Both SNP 0041.scaffold00154 550701 1 A G scaffold4406 Both SNP 0041.scaffold00154 550774 1 A G scaffold4406 Both SNP 0041.scaffold00154 550830 1 G A scaffold4406 Both SNP 0041.scaffold00154 550874 1 A T scaffold4406 Both SNP 0041.scaffold00154 550882 1 T C scaffold4406 ReadM INDEL 0041.scaffold00154 550957 1 G . - ReadM SNP 0041.scaffold00154 551130 1 T G - ReadM SNP 0041.scaffold00154 551223 1 G T - ReadM SNP 0041.scaffold00154 551238 1 C T - ReadM SNP 0041.scaffold00154 551309 1 A G - ReadM SNP 0041.scaffold00154 551370 1 T C - ReadM SNP 0041.scaffold00154 551415 1 G A - ReadM SNP 0041.scaffold00154 551427 1 G C - ReadM SNP 0041.scaffold00154 551480 1 A G - ReadM SNP 0041.scaffold00154 551567 1 C T - ReadM SNP 0041.scaffold00154 551874 1 C G - ReadM SNP 0041.scaffold00154 552221 1 C T - ReadM SNP 0041.scaffold00154 552228 1 C T - ReadM SNP 0041.scaffold00154 552390 1 A G - ReadM SNP 0041.scaffold00154 552403 1 G C - ReadM SNP 0041.scaffold00154 552497 1 A G - ReadM INDEL 0041.scaffold00154 552501 1 . T - ReadM SNP 0041.scaffold00154 552571 1 G A - ReadM INDEL 0041.scaffold00154 552615 1 A . - ReadM SNP 0041.scaffold00154 552849 1 T C - ReadM INDEL 0041.scaffold00154 552891 1 . A - ReadM SNP 0041.scaffold00154 553209 1 C A - ReadM SNP 0041.scaffold00154 553228 1 A G - ReadM SNP 0041.scaffold00154 553272 1 A G - ReadM SNP 0041.scaffold00154 553397 1 C T - ReadM SNP 0041.scaffold00154 553411 1 A G - ReadM INDEL 0041.scaffold00154 553438 1 A . - ReadM SNP 0041.scaffold00154 553625 1 C A - ReadM SNP 0041.scaffold00154 553633 1 T A - ReadM SNP 0041.scaffold00154 553706 1 A C - ReadM SNP 0041.scaffold00154 553863 1 T A - ReadM SNP 0041.scaffold00154 553869 1 C A - ReadM SNP 0041.scaffold00154 553963 1 G A - ReadM SNP 0041.scaffold00154 553999 1 T C - ReadM SNP 0041.scaffold00154 554068 1 T A - ReadM SNP 0041.scaffold00154 554090 1 C A - ReadM SNP 0041.scaffold00154 554156 1 A G - ReadM SNP 0041.scaffold00154 554191 1 T C - ReadM SNP 0041.scaffold00154 554359 1 C T - ReadM SNP 0041.scaffold00154 554388 1 G A - ReadM SNP 0041.scaffold00154 554523 1 G T - ReadM SNP 0041.scaffold00154 554648 1 G A - ReadM SNP 0041.scaffold00154 554700 1 T A - ReadM SNP 0041.scaffold00154 554766 1 C G - ReadM SNP 0041.scaffold00154 554908 1 C T - ReadM INDEL 0041.scaffold00154 555066 1 . T - ReadM SNP 0041.scaffold00154 555151 1 C T - ReadM SNP 0041.scaffold00154 555161 1 G C - ReadM SNP 0041.scaffold00154 555163 1 T C - ReadM SNP 0041.scaffold00154 555273 1 C T - ReadM INDEL 0041.scaffold00154 555341 1 C . - ReadM SNP 0041.scaffold00154 555543 1 C T - ReadM SNP 0041.scaffold00154 555573 1 G T - ReadM INDEL 0041.scaffold00154 555576 1 A . - ReadM SNP 0041.scaffold00154 555623 1 C T - ReadM SNP 0041.scaffold00154 555671 1 C T - ReadM SNP 0041.scaffold00154 555752 1 A G - ReadM SNP 0041.scaffold00154 555965 1 C A - ReadM INDEL 0041.scaffold00154 555999 2 .. GA - ReadM INDEL 0041.scaffold00154 556001 2 .. GG - ReadM INDEL 0041.scaffold00154 556003 2 .. GG - ReadM SNP 0041.scaffold00154 556078 1 T A - ReadM SNP 0041.scaffold00154 556105 1 A G - ReadM SNP 0041.scaffold00154 556125 1 A G - ReadM SNP 0041.scaffold00154 556142 1 C T - ReadM SNP 0041.scaffold00154 556160 1 A G - Both SNP 0041.scaffold00154 556257 1 G A scaffold4406 Both SNP 0041.scaffold00154 556289 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 556370 2 GA AG scaffold4406 Both SNP 0041.scaffold00154 556425 1 A G scaffold4406 Both SNP 0041.scaffold00154 556478 1 T C scaffold4406 Both SNP 0041.scaffold00154 556493 1 G A scaffold4406 Both SNP 0041.scaffold00154 556540 1 C A scaffold4406 Both SNP 0041.scaffold00154 556698 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 556764 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 556780 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 556794 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 556805 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 556809 2 AA GG scaffold4406 Both SNP 0041.scaffold00154 556837 1 A C scaffold4406 Both SNP 0041.scaffold00154 556844 1 C T scaffold4406 Both SNP 0041.scaffold00154 556927 1 C T scaffold4406 Both SNP 0041.scaffold00154 556931 1 C T scaffold4406 Both SNP 0041.scaffold00154 556985 1 C T scaffold4406 Both SNP 0041.scaffold00154 557017 1 G A scaffold4406 Both INDEL 0041.scaffold00154 557024 1 C . scaffold4406 ScafM SNP 0041.scaffold00154 557048 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 557064 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 557077 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 557097 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 557111 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 557157 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 557191 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 557193 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 557212 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 557214 1 G T scaffold4406 Both SNP 0041.scaffold00154 557234 1 G A scaffold4406 ReadM SNP 0041.scaffold00154 557409 1 T C - ReadM SNP 0041.scaffold00154 557493 1 A G - ReadM SNP 0041.scaffold00154 557566 1 A G - ReadM SNP 0041.scaffold00154 557584 1 A T - ReadM SNP 0041.scaffold00154 557711 1 C G - ReadM SNP 0041.scaffold00154 558501 1 C T - ReadM SNP 0041.scaffold00154 558523 1 G A - ReadM SNP 0041.scaffold00154 558539 1 G A - ScafM SNP 0041.scaffold00154 560951 1 T G scaffold999 ScafM SNP 0041.scaffold00154 561022 2 TC AT scaffold999 ScafM SNP 0041.scaffold00154 562553 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 562556 3 TCC ... scaffold4406 ScafM SNP 0041.scaffold00154 562565 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 562640 1 T C scaffold4406 ScafM INDEL 0041.scaffold00154 562658 8 ........ GATATTAA scaffold4406 ScafM SNP 0041.scaffold00154 562672 1 T C scaffold4406 Both SNP 0041.scaffold00154 562781 1 A T scaffold4406 Both SNP 0041.scaffold00154 562786 1 A G scaffold4406 Both SNP 0041.scaffold00154 562826 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 562857 1 T C scaffold4406 Both SNP 0041.scaffold00154 562891 1 T G scaffold4406 ScafM INDEL 0041.scaffold00154 562985 7 ....... TCTGGTA scaffold4406 ReadM SNP 0041.scaffold00154 563233 1 A G - Both SNP 0041.scaffold00154 563295 1 T C scaffold4406 Both SNP 0041.scaffold00154 563327 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 563349 1 C A scaffold4406 ScafM INDEL 0041.scaffold00154 563377 3 ..C TAT scaffold4406 ScafM SNP 0041.scaffold00154 563391 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 563408 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 563754 1 G A scaffold4406 Both SNP 0041.scaffold00154 563793 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 563877 3 CCA TAG scaffold4406 ScafM SNP 0041.scaffold00154 563901 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 563994 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 564537 1 G A scaffold4406 ScafM INDEL 0041.scaffold00154 564547 1 T . scaffold4406 ScafM SNP 0041.scaffold00154 564580 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 564588 1 T A scaffold4406 ScafM INDEL 0041.scaffold00154 564623 19 GAAGAACGTGGTCAAAGCT ................... scaffold4406 ScafM INDEL 0041.scaffold00154 564673 1 A . scaffold4406 ScafM INDEL 0041.scaffold00154 564676 2 AT .. scaffold4406 ScafM INDEL 0041.scaffold00154 564681 1 A . scaffold4406 ScafM SNP 0041.scaffold00154 565153 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 565158 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 565194 1 C A scaffold4406 ScafM INDEL 0041.scaffold00154 565208 5 ..... GAACA scaffold4406 ScafM SNP 0041.scaffold00154 565234 1 A T scaffold4406 ScafM INDEL 0041.scaffold00154 565244 7 CTGCTGC ....... scaffold4406 ScafM SNP 0041.scaffold00154 565266 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 565335 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 565368 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 565374 2 TT AA scaffold4406 ScafM SNP 0041.scaffold00154 565416 1 A C scaffold4406 ScafM INDEL 0041.scaffold00154 565455 3 TTA ... scaffold4406 ScafM SNP 0041.scaffold00154 565509 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 565524 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 565532 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 565537 2 AT CC scaffold4406 ScafM SNP 0041.scaffold00154 565545 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 565562 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 565576 2 .. AA scaffold4406 ScafM SNP 0041.scaffold00154 565578 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 565674 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 565703 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 565720 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 565747 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 565764 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 565766 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 565771 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 565798 2 GA AT scaffold4406 ScafM SNP 0041.scaffold00154 565827 1 G A scaffold4406 ScafM INDEL 0041.scaffold00154 565829 1 . C scaffold4406 ScafM SNP 0041.scaffold00154 565834 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 565840 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 565854 1 G C scaffold4406 Both SNP 0041.scaffold00154 565898 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 565979 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 565991 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 566001 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 568273 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 568280 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 568326 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 568341 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 568343 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 568350 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569526 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569599 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 569605 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569615 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 569628 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 569634 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 569637 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 569651 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 569659 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569672 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 569677 1 C T scaffold4406 ScafM INDEL 0041.scaffold00154 569678 5 ..... CGAAG scaffold4406 ScafM SNP 0041.scaffold00154 569688 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 569695 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569702 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 569724 2 AT TC scaffold4406 ScafM SNP 0041.scaffold00154 569737 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569743 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569751 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 569756 1 C G scaffold4406 ScafM INDEL 0041.scaffold00154 569773 3 AAA ... scaffold4406 ScafM SNP 0041.scaffold00154 569793 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 569799 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 569805 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569816 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 569823 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569843 2 TG CA scaffold4406 ScafM SNP 0041.scaffold00154 569856 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 569858 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 569862 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 569885 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569890 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 569901 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 569910 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 569930 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569937 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 569942 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 569944 2 TT GG scaffold4406 ScafM SNP 0041.scaffold00154 569958 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 569974 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 569980 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 570004 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 573472 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 573480 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 573485 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 573500 1 C G scaffold4406 ScafM INDEL 0041.scaffold00154 573513 1 C . scaffold4406 ScafM SNP 0041.scaffold00154 573520 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 573523 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 573730 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 573733 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 573751 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 573785 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 573799 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 573806 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 573845 2 GA AG scaffold4406 ScafM SNP 0041.scaffold00154 573873 1 A G scaffold4406 ScafM INDEL 0041.scaffold00154 578566 7 ....... CTTTTTT scaffold19114 ScafM SNP 0041.scaffold00154 578589 1 C A scaffold19114 ScafM SNP 0041.scaffold00154 578597 1 A G scaffold19114 ScafM SNP 0041.scaffold00154 578624 1 G C scaffold19114 ScafM INDEL 0041.scaffold00154 578674 2 CT .. scaffold19114 ScafM SNP 0041.scaffold00154 578693 1 A C scaffold19114 ScafM SNP 0041.scaffold00154 578712 1 T C scaffold19114 ScafM SNP 0041.scaffold00154 578741 1 C T scaffold19114 ScafM SNP 0041.scaffold00154 582405 1 G T scaffold4406 ScafM INDEL 0041.scaffold00154 582413 1 . G scaffold4406 ScafM SNP 0041.scaffold00154 582476 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 582498 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 582550 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 582557 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 582578 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 582580 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 582649 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 582651 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 582674 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 582685 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 582692 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 582721 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 582726 1 T C scaffold4406 ReadM SNP 0041.scaffold00154 583080 1 A G - ReadM SNP 0041.scaffold00154 583135 1 A T - ReadM SNP 0041.scaffold00154 583143 1 G A - ScafM SNP 0041.scaffold00154 583348 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 583352 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 583354 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 583372 1 G A scaffold4406 ScafM INDEL 0041.scaffold00154 583394 1 . T scaffold4406 ScafM SNP 0041.scaffold00154 583404 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 583448 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 583466 1 T A scaffold4406 ScafM INDEL 0041.scaffold00154 583488 1 C . scaffold4406 ScafM SNP 0041.scaffold00154 583497 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 583502 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 583507 2 CA AT scaffold4406 ScafM SNP 0041.scaffold00154 583513 1 G A scaffold4406 Both SNP 0041.scaffold00154 583598 1 G T scaffold4406 Both SNP 0041.scaffold00154 583621 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 583639 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 583651 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 583656 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 583667 1 A T scaffold4406 ScafM INDEL 0041.scaffold00154 583669 3 ... AGG scaffold4406 ScafM SNP 0041.scaffold00154 583677 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 583698 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 583701 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 583703 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 583709 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 583712 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 583718 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 583745 2 TG CA scaffold4406 ScafM SNP 0041.scaffold00154 583748 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 583758 1 T G scaffold4406 ScafM INDEL 0041.scaffold00154 583772 1 . G scaffold4406 ScafM SNP 0041.scaffold00154 583801 1 T G scaffold4406 ScafM INDEL 0041.scaffold00154 583947 1 . A scaffold4406 ScafM INDEL 0041.scaffold00154 583955 1 . G scaffold4406 ScafM SNP 0041.scaffold00154 583972 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 583998 2 AG CT scaffold4406 ScafM SNP 0041.scaffold00154 584005 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584008 1 C G scaffold4406 ScafM INDEL 0041.scaffold00154 584016 28 ............................ TAGCCCGGTCAAGGTTTTGAGGGTCAAT scaffold4406 ScafM INDEL 0041.scaffold00154 584036 1 . A scaffold4406 ScafM SNP 0041.scaffold00154 584039 1 C T scaffold4406 ScafM INDEL 0041.scaffold00154 584041 1 G . scaffold4406 ScafM SNP 0041.scaffold00154 584047 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 584054 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 584061 2 GA AG scaffold4406 ScafM SNP 0041.scaffold00154 584105 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 584272 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584278 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584307 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584357 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584383 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 584406 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584411 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584416 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584431 1 A T scaffold4406 ScafM SNP 0041.scaffold00154 584459 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 584477 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584486 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584494 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 584503 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 584509 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584525 1 T C scaffold4406 ScafM INDEL 0041.scaffold00154 584534 6 GTTTTC ...... scaffold4406 ScafM SNP 0041.scaffold00154 584609 1 T A scaffold4406 ScafM SNP 0041.scaffold00154 584615 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584631 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584656 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584678 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584695 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584697 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 584756 1 C A scaffold4406 ScafM SNP 0041.scaffold00154 584759 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584771 1 T C scaffold4406 ScafM SNP 0041.scaffold00154 584773 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 584806 1 C T scaffold4406 ReadM SNP 0041.scaffold00154 585021 1 G A - ReadM INDEL 0041.scaffold00154 585530 1 T . - ReadM SNP 0041.scaffold00154 586907 1 A G - ReadM SNP 0041.scaffold00154 586917 1 T C - ReadM SNP 0041.scaffold00154 586967 1 A C - ReadM SNP 0041.scaffold00154 587002 1 G A - ReadM INDEL 0041.scaffold00154 587011 1 . C - ReadM INDEL 0041.scaffold00154 587241 1 C . - ReadM SNP 0041.scaffold00154 587256 1 T G - ReadM SNP 0041.scaffold00154 587284 1 C T - ReadM SNP 0041.scaffold00154 587371 1 C T - ReadM SNP 0041.scaffold00154 587438 1 C G - ReadM SNP 0041.scaffold00154 587488 1 A C - ReadM SNP 0041.scaffold00154 587631 1 G T - ReadM SNP 0041.scaffold00154 587684 1 C T - ReadM SNP 0041.scaffold00154 587689 1 T C - ReadM SNP 0041.scaffold00154 587719 1 G T - ReadM SNP 0041.scaffold00154 587981 1 G T - ReadM INDEL 0041.scaffold00154 588008 2 GT .. - ScafM SNP 0041.scaffold00154 588102 1 A C scaffold4406 ScafM SNP 0041.scaffold00154 588118 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 588143 1 G C scaffold4406 Both SNP 0041.scaffold00154 588162 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 588212 1 C G scaffold4406 ScafM SNP 0041.scaffold00154 588215 1 A G scaffold4406 ScafM SNP 0041.scaffold00154 588235 1 G T scaffold4406 ScafM SNP 0041.scaffold00154 588257 1 G C scaffold4406 ScafM SNP 0041.scaffold00154 588280 1 A C scaffold4406 ReadM SNP 0041.scaffold00154 588411 1 A C - ReadM SNP 0041.scaffold00154 588427 1 A C - ReadM SNP 0041.scaffold00154 588694 1 T C - ReadM SNP 0041.scaffold00154 588753 1 T C - ScafM SNP 0041.scaffold00154 589586 1 T G scaffold4406 ScafM SNP 0041.scaffold00154 589603 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 589617 1 G A scaffold4406 ScafM SNP 0041.scaffold00154 589654 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 589780 1 C T scaffold4406 ScafM SNP 0041.scaffold00154 589815 1 G A scaffold4406 ReadM SNP 0041.scaffold00154 590256 1 C G - ReadM INDEL 0041.scaffold00154 590273 1 . A - ReadM SNP 0041.scaffold00154 590281 1 G T - ReadM SNP 0041.scaffold00154 590350 1 G T - ReadM SNP 0041.scaffold00154 590367 1 G A - ReadM SNP 0041.scaffold00154 590599 1 C T - ReadM SNP 0041.scaffold00154 590691 1 G T - ReadM SNP 0041.scaffold00154 590709 1 G C - ReadM SNP 0041.scaffold00154 590822 1 T C - ReadM SNP 0041.scaffold00154 590832 1 C A - ReadM SNP 0041.scaffold00154 590920 1 G A - ReadM INDEL 0041.scaffold00154 590968 1 T . - Both SNP 0041.scaffold00154 591019 1 G A scaffold9622 Both SNP 0041.scaffold00154 591056 1 T C scaffold9622 Both INDEL 0041.scaffold00154 591072 1 C . scaffold9622 Both SNP 0041.scaffold00154 591115 1 A T scaffold9622 Both SNP 0041.scaffold00154 591151 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 591194 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 591211 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 591262 1 A C scaffold9622 ScafM SNP 0041.scaffold00154 591651 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 591653 2 CT GC scaffold9622 ScafM SNP 0041.scaffold00154 591668 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 591674 1 A G scaffold9622 ScafM INDEL 0041.scaffold00154 591678 4 .... TATA scaffold9622 ScafM INDEL 0041.scaffold00154 591679 5 ....G CAACT scaffold9622 ScafM SNP 0041.scaffold00154 591743 1 A G scaffold9622 ScafM INDEL 0041.scaffold00154 591770 1 T . scaffold9622 ScafM SNP 0041.scaffold00154 591775 2 TC AG scaffold9622 ScafM INDEL 0041.scaffold00154 591788 1 . A scaffold9622 Both SNP 0041.scaffold00154 591805 1 A G scaffold9622 Both SNP 0041.scaffold00154 591813 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 592122 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 592131 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 592144 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 592198 2 TA CC scaffold9622 ScafM INDEL 0041.scaffold00154 592206 1 . T scaffold9622 ScafM SNP 0041.scaffold00154 592226 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 592234 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 593302 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 593344 2 AT GA scaffold9622 ScafM SNP 0041.scaffold00154 593403 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 593405 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 594733 1 A C scaffold9622 ScafM SNP 0041.scaffold00154 594735 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 594738 1 C A scaffold9622 ScafM SNP 0041.scaffold00154 594748 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 594757 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 594766 1 C G scaffold9622 ScafM SNP 0041.scaffold00154 594768 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 594774 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 594795 3 CGT TCC scaffold9622 ScafM SNP 0041.scaffold00154 594799 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 594812 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 594880 1 A C scaffold9622 ScafM SNP 0041.scaffold00154 595056 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 595058 1 T C scaffold9622 ScafM INDEL 0041.scaffold00154 595066 1 C . scaffold9622 ScafM SNP 0041.scaffold00154 595079 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 595082 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 595110 1 A G scaffold9622 ScafM INDEL 0041.scaffold00154 595186 1 T . scaffold9622 ScafM INDEL 0041.scaffold00154 595211 2 AA .G scaffold9622 ScafM SNP 0041.scaffold00154 595391 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 595441 1 T G scaffold9622 ScafM SNP 0041.scaffold00154 595456 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 595480 3 GTC ACA scaffold9622 ReadM SNP 0041.scaffold00154 596102 1 C T - ReadM SNP 0041.scaffold00154 596173 1 G A - ReadM SNP 0041.scaffold00154 596176 1 G A - ScafM SNP 0041.scaffold00154 596205 1 T A scaffold9622 ScafM INDEL 0041.scaffold00154 596229 2 .. AG scaffold9622 ScafM SNP 0041.scaffold00154 596241 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 596252 1 C T scaffold9622 ReadM SNP 0041.scaffold00154 596584 1 T C - ReadM SNP 0041.scaffold00154 596626 1 G C - ReadM SNP 0041.scaffold00154 596640 1 C A - ScafM INDEL 0041.scaffold00154 596881 1 . T scaffold9622 ScafM SNP 0041.scaffold00154 596911 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 596934 2 TG CA scaffold9622 ScafM SNP 0041.scaffold00154 596950 1 A G scaffold9622 ScafM INDEL 0041.scaffold00154 596960 3 ... GAA scaffold9622 ScafM INDEL 0041.scaffold00154 596966 1 . G scaffold9622 ScafM SNP 0041.scaffold00154 596970 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 596972 1 G T scaffold9622 ScafM SNP 0041.scaffold00154 596977 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 596980 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 596986 1 G T scaffold9622 ScafM INDEL 0041.scaffold00154 597035 1 T . scaffold9622 ScafM SNP 0041.scaffold00154 597037 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 597044 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597049 1 G A scaffold9622 ScafM INDEL 0041.scaffold00154 597074 8 CGGTGACA ........ scaffold9622 ScafM SNP 0041.scaffold00154 597087 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597092 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 597099 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597157 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597164 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597185 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597201 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597231 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 597243 1 C A scaffold9622 ScafM SNP 0041.scaffold00154 597248 1 A C scaffold9622 ScafM SNP 0041.scaffold00154 597250 1 G C scaffold9622 ScafM SNP 0041.scaffold00154 597254 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597546 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597584 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597595 1 C A scaffold9622 ScafM SNP 0041.scaffold00154 597627 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 597683 1 T C scaffold9622 ScafM INDEL 0041.scaffold00154 597694 10 CCTATTCTTC .......... scaffold9622 ScafM INDEL 0041.scaffold00154 597706 8 CTCCATTA ........ scaffold9622 ScafM INDEL 0041.scaffold00154 597715 5 GCCCC ..... scaffold9622 ScafM SNP 0041.scaffold00154 597737 1 C T scaffold9622 ScafM SNP 0041.scaffold00154 597743 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 597761 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 597791 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 597834 1 A G scaffold9622 ScafM SNP 0041.scaffold00154 597840 1 T C scaffold9622 ScafM SNP 0041.scaffold00154 597854 2 AC GA scaffold9622 ScafM SNP 0041.scaffold00154 597905 1 C A scaffold9622 ScafM SNP 0041.scaffold00154 597907 2 AG TT scaffold9622 ScafM SNP 0041.scaffold00154 597938 1 G C scaffold9622 ScafM SNP 0041.scaffold00154 597965 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 597982 1 G C scaffold9622 ScafM SNP 0041.scaffold00154 597990 1 G T scaffold9622 ScafM SNP 0041.scaffold00154 598010 1 A C scaffold9622 ScafM INDEL 0041.scaffold00154 598025 4 .... TACG scaffold9622 ScafM SNP 0041.scaffold00154 598032 1 A T scaffold9622 ScafM SNP 0041.scaffold00154 598041 1 A C scaffold9622 ScafM SNP 0041.scaffold00154 598210 1 G T scaffold9622 ScafM SNP 0041.scaffold00154 598244 1 C A scaffold9622 ScafM SNP 0041.scaffold00154 598246 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 598256 1 T A scaffold9622 ScafM SNP 0041.scaffold00154 598293 1 G T scaffold9622 ScafM INDEL 0041.scaffold00154 598299 3 AAA ... scaffold9622 ScafM SNP 0041.scaffold00154 598311 1 G A scaffold9622 ScafM SNP 0041.scaffold00154 598314 1 G T scaffold9622 ScafM SNP 0041.scaffold00154 598323 1 G A scaffold9622 ReadM SNP 0041.scaffold00154 600402 1 A G - ReadM SNP 0041.scaffold00154 600878 1 C G - ScafM SNP 0041.scaffold00154 601645 1 A C scaffold766 ScafM SNP 0041.scaffold00154 601697 1 T C scaffold766 ScafM SNP 0041.scaffold00154 601717 1 C G scaffold766 ScafM SNP 0041.scaffold00154 602103 1 G T scaffold766 ScafM SNP 0041.scaffold00154 602128 1 A G scaffold766 ScafM SNP 0041.scaffold00154 602138 1 C G scaffold766 ScafM INDEL 0041.scaffold00154 602142 14 .............. GGAAACAGGAAACA scaffold766 ScafM SNP 0041.scaffold00154 602157 1 G A scaffold766 ScafM SNP 0041.scaffold00154 602221 1 T G scaffold766 ScafM SNP 0041.scaffold00154 602245 1 T G scaffold766 ScafM SNP 0041.scaffold00154 602255 1 T C scaffold766 ScafM SNP 0041.scaffold00154 602280 1 T C scaffold766 ScafM SNP 0041.scaffold00154 608311 1 T C scaffold766 ScafM SNP 0041.scaffold00154 608314 1 C T scaffold766 ScafM SNP 0041.scaffold00154 608340 1 T G scaffold766 ScafM INDEL 0041.scaffold00154 608344 1 G . scaffold766 ScafM INDEL 0041.scaffold00154 608347 2 AA .. scaffold766 ScafM SNP 0041.scaffold00154 608359 1 A T scaffold766 ScafM SNP 0041.scaffold00154 608362 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608381 1 G A scaffold766 ScafM INDEL 0041.scaffold00154 608429 6 ...... TGGCAA scaffold766 ScafM SNP 0041.scaffold00154 608436 1 G A scaffold766 ScafM SNP 0041.scaffold00154 608449 1 G A scaffold766 ScafM SNP 0041.scaffold00154 608463 1 G A scaffold766 ScafM INDEL 0041.scaffold00154 608471 27 AATGGTGGTGTGATGGAGGAGAGAAAG ........................... scaffold766 ScafM INDEL 0041.scaffold00154 608509 1 T . scaffold766 ScafM SNP 0041.scaffold00154 608522 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608532 1 T A scaffold766 ScafM SNP 0041.scaffold00154 608540 1 T C scaffold766 ScafM SNP 0041.scaffold00154 608559 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608627 1 A G scaffold766 ScafM SNP 0041.scaffold00154 608632 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608637 1 T C scaffold766 ScafM SNP 0041.scaffold00154 608640 1 G A scaffold766 ScafM SNP 0041.scaffold00154 608730 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608742 1 C G scaffold766 ScafM SNP 0041.scaffold00154 608766 1 G A scaffold766 ScafM SNP 0041.scaffold00154 608795 1 C T scaffold766 ScafM SNP 0041.scaffold00154 608828 1 G A scaffold766 ScafM SNP 0041.scaffold00154 608841 1 C T scaffold766 ScafM SNP 0041.scaffold00154 608869 1 G T scaffold766 ScafM SNP 0041.scaffold00154 608888 1 C A scaffold766 ScafM SNP 0041.scaffold00154 608915 1 C G scaffold766 ScafM SNP 0041.scaffold00154 608922 1 T G scaffold766 ScafM SNP 0041.scaffold00154 608925 1 A T scaffold766 ScafM SNP 0041.scaffold00154 608951 1 A C scaffold766 ScafM SNP 0041.scaffold00154 609000 1 G T scaffold766 ReadM SNP 0041.scaffold00154 609535 1 C G - ReadM SNP 0041.scaffold00154 609573 1 C G - ReadM SNP 0041.scaffold00154 609617 1 T C - ReadM SNP 0041.scaffold00154 609692 1 A T - ReadM SNP 0041.scaffold00154 609698 1 G C - ScafM SNP 0041.scaffold00154 610286 1 C G scaffold766 ScafM SNP 0041.scaffold00154 610290 1 A T scaffold766 ScafM SNP 0041.scaffold00154 610303 1 T C scaffold766 ScafM SNP 0041.scaffold00154 610305 1 G C scaffold766 ScafM SNP 0041.scaffold00154 610317 1 A C scaffold766 ScafM SNP 0041.scaffold00154 610343 1 G T scaffold766 ScafM SNP 0041.scaffold00154 610386 1 A T scaffold766 ScafM SNP 0041.scaffold00154 610389 1 T C scaffold766 ScafM SNP 0041.scaffold00154 610416 1 A G scaffold766 ReadM SNP 0041.scaffold00154 620649 1 T C - ReadM SNP 0041.scaffold00154 620675 1 G A - ReadM SNP 0041.scaffold00154 620831 1 G A - ReadM SNP 0041.scaffold00154 621064 1 C T - ReadM SNP 0041.scaffold00154 621149 1 T G - ReadM SNP 0041.scaffold00154 621515 1 G T - ScafM SNP 0041.scaffold00154 626233 1 A G scaffold4905 ScafM SNP 0041.scaffold00154 635000 2 CT GA scaffold766 ScafM SNP 0041.scaffold00154 635043 1 A T scaffold766 ScafM SNP 0041.scaffold00154 635085 1 G T scaffold766 ScafM SNP 0041.scaffold00154 635138 1 C T scaffold766 ScafM SNP 0041.scaffold00154 635141 1 C G scaffold766 ScafM SNP 0041.scaffold00154 635154 1 T A scaffold766 ScafM SNP 0041.scaffold00154 635157 1 G C scaffold766 Both SNP 0041.scaffold00154 635201 1 A G scaffold766 ScafM SNP 0041.scaffold00154 635259 2 GG AA scaffold766 ScafM INDEL 0041.scaffold00154 635282 4 .... TACA scaffold766 ScafM INDEL 0041.scaffold00154 635284 5 ..... TTTTT scaffold766 ScafM SNP 0041.scaffold00154 635299 1 T A scaffold766 ScafM SNP 0041.scaffold00154 635470 1 G T scaffold766 ScafM INDEL 0041.scaffold00154 635482 3 ATA ... scaffold766 ScafM SNP 0041.scaffold00154 635506 1 A G scaffold766 ScafM SNP 0041.scaffold00154 635526 1 T C scaffold766 ScafM SNP 0041.scaffold00154 635576 1 G A scaffold766 Both SNP 0041.scaffold00154 635612 1 C T scaffold766 ScafM INDEL 0041.scaffold00154 635807 18 .................. AGTTTTATTGTACATCTA scaffold766 ScafM SNP 0041.scaffold00154 635846 1 T A scaffold766 ScafM SNP 0041.scaffold00154 635892 1 G A scaffold766 ScafM SNP 0041.scaffold00154 636257 1 A C scaffold5974 ScafM SNP 0041.scaffold00154 636446 1 C T scaffold5974 ScafM INDEL 0041.scaffold00154 637293 5 AATTT ....G scaffold766 ScafM SNP 0041.scaffold00154 637335 1 C T scaffold766 ScafM SNP 0041.scaffold00154 637402 1 G A scaffold766 ScafM SNP 0041.scaffold00154 637543 1 G A scaffold766 ScafM SNP 0041.scaffold00154 637547 1 G C scaffold766 ScafM SNP 0041.scaffold00154 637579 1 T C scaffold766 ScafM INDEL 0041.scaffold00154 637625 32 AAATATATTTTCTTGTATAAAAATTTTGTCTT ................................ scaffold766 ReadM SNP 0041.scaffold00154 637977 1 C G - ReadM SNP 0041.scaffold00154 638053 1 A G - ReadM SNP 0041.scaffold00154 638205 1 G A - ReadM SNP 0041.scaffold00154 638300 1 G A - ReadM SNP 0041.scaffold00154 638302 1 C T - ReadM INDEL 0041.scaffold00154 638397 1 A . - ReadM SNP 0041.scaffold00154 638409 1 A G - ReadM SNP 0041.scaffold00154 638574 1 T C - Both SNP 0041.scaffold00154 638704 1 G A scaffold766 Both SNP 0041.scaffold00154 639082 1 G A scaffold766 ReadM SNP 0041.scaffold00154 639182 1 G T - ReadM SNP 0041.scaffold00154 639236 1 A C - ScafM SNP 0041.scaffold00154 639295 1 T C scaffold766 ScafM SNP 0041.scaffold00154 639305 1 C T scaffold766 ScafM SNP 0041.scaffold00154 639338 1 G T scaffold766 Both SNP 0041.scaffold00154 639341 1 A G scaffold766 Both SNP 0041.scaffold00154 639390 1 T C scaffold766 ReadM SNP 0041.scaffold00154 639439 1 C T - ReadM SNP 0041.scaffold00154 639480 1 G A - ReadM SNP 0041.scaffold00154 639567 1 G A - ReadM SNP 0041.scaffold00154 639580 1 G A - ReadM SNP 0041.scaffold00154 639663 1 A G - Both SNP 0041.scaffold00154 639718 1 C A scaffold766 Both SNP 0041.scaffold00154 639765 1 G A scaffold766 ScafM INDEL 0041.scaffold00154 639784 1 . T scaffold766 ScafM INDEL 0041.scaffold00154 639790 2 .. CC scaffold766 Both SNP 0041.scaffold00154 639880 1 T G scaffold766 Both SNP 0041.scaffold00154 639912 1 C A scaffold766 Both INDEL 0041.scaffold00154 639967 1 A . scaffold766 ScafM SNP 0041.scaffold00154 639974 1 C A scaffold766 ScafM SNP 0041.scaffold00154 640004 1 A C scaffold766 ScafM SNP 0041.scaffold00154 640112 1 A G scaffold766 ReadM SNP 0041.scaffold00154 640800 1 G A - ReadM SNP 0041.scaffold00154 640842 1 T C - ReadM SNP 0041.scaffold00154 640898 1 T G - ReadM SNP 0041.scaffold00154 641048 1 G A - ReadM SNP 0041.scaffold00154 641122 1 A T - ReadM SNP 0041.scaffold00154 641205 1 A G - ReadM SNP 0041.scaffold00154 641242 1 G T - ReadM SNP 0041.scaffold00154 641330 1 A G - ReadM SNP 0041.scaffold00154 641345 1 C A - ReadM SNP 0041.scaffold00154 641441 1 C T - ReadM SNP 0041.scaffold00154 641492 1 T C - ReadM SNP 0041.scaffold00154 641673 1 T G - ReadM SNP 0041.scaffold00154 644750 1 A G - ReadM SNP 0041.scaffold00154 645131 1 T C - ScafM INDEL 0041.scaffold00154 645536 1 C . scaffold766 ReadM SNP 0041.scaffold00154 645714 1 A T - ReadM SNP 0041.scaffold00154 645718 1 A C - ReadM SNP 0041.scaffold00154 645859 1 A G - ReadM SNP 0041.scaffold00154 645934 1 G T - ReadM SNP 0041.scaffold00154 645943 1 A C - ReadM SNP 0041.scaffold00154 645975 1 T C - ReadM SNP 0041.scaffold00154 646780 1 G A - ReadM SNP 0041.scaffold00154 646944 1 G A - ReadM SNP 0041.scaffold00154 647013 1 A G - ReadM SNP 0041.scaffold00154 647051 1 C G - ReadM SNP 0041.scaffold00154 647061 1 C A - ReadM SNP 0041.scaffold00154 647081 1 C T - ReadM SNP 0041.scaffold00154 647173 1 C T - ReadM SNP 0041.scaffold00154 647180 1 G A - ReadM SNP 0041.scaffold00154 647202 1 T C - ReadM SNP 0041.scaffold00154 647214 1 A C - ScafM INDEL 0041.scaffold00154 647343 7 ....... ATTCACG scaffold766 ScafM SNP 0041.scaffold00154 647399 2 AC GA scaffold766 Both SNP 0041.scaffold00154 647440 1 T C scaffold766 Both SNP 0041.scaffold00154 647570 1 A C scaffold766 Both SNP 0041.scaffold00154 647578 1 C T scaffold766 ScafM INDEL 0041.scaffold00154 647666 1 . A scaffold766 ScafM SNP 0041.scaffold00154 647721 1 C T scaffold766 ScafM SNP 0041.scaffold00154 647728 1 G T scaffold766 Both SNP 0041.scaffold00154 647891 1 A G scaffold766 ReadM SNP 0041.scaffold00154 647916 1 A G - ReadM SNP 0041.scaffold00154 647924 1 T C - ScafM SNP 0041.scaffold00154 647948 1 A T scaffold766 ScafM INDEL 0041.scaffold00154 648159 2 TG .. scaffold766 ScafM SNP 0041.scaffold00154 648162 1 A G scaffold766 ScafM SNP 0041.scaffold00154 648236 2 TA GC scaffold766 ScafM SNP 0041.scaffold00154 648303 1 A T scaffold766 Both SNP 0041.scaffold00154 648735 1 A T scaffold766 Both SNP 0041.scaffold00154 648759 1 A C scaffold766 ScafM SNP 0041.scaffold00154 648798 1 G T scaffold766 ScafM SNP 0041.scaffold00154 648819 1 T A scaffold766 ScafM SNP 0041.scaffold00154 648821 1 A T scaffold766 Both INDEL 0041.scaffold00154 648901 1 . G scaffold766 ScafM INDEL 0041.scaffold00154 649103 2 .. GT scaffold766 ScafM SNP 0041.scaffold00154 649121 1 T A scaffold766 ScafM SNP 0041.scaffold00154 649149 1 C A scaffold766 ScafM INDEL 0041.scaffold00154 649215 4 TTTT .... scaffold766 Both INDEL 0041.scaffold00154 649336 1 . A scaffold766 Both SNP 0041.scaffold00154 649388 1 G T scaffold766 ScafM SNP 0041.scaffold00154 649577 1 C T scaffold766 ScafM SNP 0041.scaffold00154 649592 1 T A scaffold766 ScafM SNP 0041.scaffold00154 649598 1 T A scaffold766 ScafM SNP 0041.scaffold00154 649608 1 T C scaffold766 ScafM SNP 0041.scaffold00154 649619 1 T A scaffold766 ScafM SNP 0041.scaffold00154 649667 1 C T scaffold766 ScafM SNP 0041.scaffold00154 649692 1 T A scaffold766 ScafM SNP 0041.scaffold00154 649698 1 A T scaffold766 ScafM SNP 0041.scaffold00154 649705 1 C G scaffold766 ScafM SNP 0041.scaffold00154 649746 1 C A scaffold766 ScafM SNP 0041.scaffold00154 649775 1 G A scaffold766 ScafM SNP 0041.scaffold00154 650107 1 C A scaffold766 ScafM SNP 0041.scaffold00154 650121 1 A G scaffold766 ScafM SNP 0041.scaffold00154 650143 1 T A scaffold766 ScafM INDEL 0041.scaffold00154 650152 2 TT .C scaffold766 ScafM SNP 0041.scaffold00154 650164 1 T C scaffold766 ScafM SNP 0041.scaffold00154 650173 1 T G scaffold766 ScafM SNP 0041.scaffold00154 650225 1 T C scaffold766 ScafM SNP 0041.scaffold00154 650253 1 A G scaffold766 ScafM SNP 0041.scaffold00154 650259 1 C T scaffold766 ScafM SNP 0041.scaffold00154 650413 2 AT CG scaffold766 ScafM SNP 0041.scaffold00154 650484 1 G C scaffold766 ScafM INDEL 0041.scaffold00154 650491 1 G . scaffold766 ScafM SNP 0041.scaffold00154 650535 1 A G scaffold766 ScafM SNP 0041.scaffold00154 650541 1 A T scaffold766 ScafM SNP 0041.scaffold00154 650544 1 T A scaffold766 Both INDEL 0041.scaffold00154 650606 3 GTA ... scaffold766 Both SNP 0041.scaffold00154 653711 1 C A scaffold766 ScafM SNP 0041.scaffold00154 662745 1 G T scaffold766 Both SNP 0041.scaffold00154 664672 1 G A scaffold766 Both SNP 0041.scaffold00154 665206 1 C A scaffold766 Both SNP 0041.scaffold00154 665237 1 T C scaffold766 ReadM SNP 0041.scaffold00154 665280 1 G A - ReadM SNP 0041.scaffold00154 665378 1 G A - ReadM SNP 0041.scaffold00154 665426 1 A G - ScafM INDEL 0041.scaffold00154 668355 15 ............... CCCCCCCCCCCCCCT scaffold766 Both SNP 0041.scaffold00154 668435 1 C T scaffold766 ScafM INDEL 0041.scaffold00154 668578 1 . T scaffold766 Both SNP 0041.scaffold00154 668856 1 C T scaffold766 ReadM SNP 0041.scaffold00154 669116 1 G A - ReadM SNP 0041.scaffold00154 669168 1 T C - ReadM SNP 0041.scaffold00154 669173 1 C T - ReadM SNP 0041.scaffold00154 669308 1 C A - ReadM SNP 0041.scaffold00154 669372 1 A C - ReadM SNP 0041.scaffold00154 669382 1 A G - ReadM SNP 0041.scaffold00154 669443 1 G C - ReadM INDEL 0041.scaffold00154 669523 1 C . - ReadM SNP 0041.scaffold00154 669625 1 G T - ReadM SNP 0041.scaffold00154 669915 1 A T - ReadM SNP 0041.scaffold00154 670181 1 C G - ReadM SNP 0041.scaffold00154 670203 1 T C - ReadM SNP 0041.scaffold00154 670332 1 C T - ReadM SNP 0041.scaffold00154 670355 1 G A - ReadM SNP 0041.scaffold00154 670490 1 G A - ReadM INDEL 0041.scaffold00154 670584 1 . T - ReadM SNP 0041.scaffold00154 670731 1 T C - ReadM SNP 0041.scaffold00154 671205 1 A G - ReadM INDEL 0041.scaffold00154 671247 2 .. AT - ReadM SNP 0041.scaffold00154 671443 1 T C - ReadM SNP 0041.scaffold00154 671581 1 G A - ReadM SNP 0041.scaffold00154 671826 1 G A - ReadM SNP 0041.scaffold00154 672050 1 C T - ReadM SNP 0041.scaffold00154 672144 1 A G - ReadM SNP 0041.scaffold00154 672152 1 T C - ReadM SNP 0041.scaffold00154 672210 1 G A - ReadM SNP 0041.scaffold00154 672305 1 G C - ReadM INDEL 0041.scaffold00154 672309 1 A . - ReadM SNP 0041.scaffold00154 672376 1 T C - ReadM SNP 0041.scaffold00154 672568 1 T C - ReadM SNP 0041.scaffold00154 672706 1 C T - ReadM INDEL 0041.scaffold00154 672871 1 A . - ReadM SNP 0041.scaffold00154 672982 1 C T - ReadM SNP 0041.scaffold00154 673243 1 G A - ReadM SNP 0041.scaffold00154 673392 1 G A - ReadM SNP 0041.scaffold00154 673474 1 A G - ReadM SNP 0041.scaffold00154 673586 1 T C - ReadM SNP 0041.scaffold00154 674193 1 G A - ReadM SNP 0041.scaffold00154 674203 1 G A - ReadM SNP 0041.scaffold00154 674361 1 G A - ReadM INDEL 0041.scaffold00154 674461 1 A . - ReadM SNP 0041.scaffold00154 674478 1 T C - ReadM SNP 0041.scaffold00154 674525 1 C T - ReadM SNP 0041.scaffold00154 674599 1 T G - ReadM SNP 0041.scaffold00154 674775 1 T G - ReadM SNP 0041.scaffold00154 674893 1 A G - ReadM SNP 0041.scaffold00154 674984 1 A G - ReadM SNP 0041.scaffold00154 675451 1 T C - ReadM SNP 0041.scaffold00154 675505 1 C T - ReadM SNP 0041.scaffold00154 675585 1 C T - ReadM SNP 0041.scaffold00154 675616 1 C T - ScafM SNP 0041.scaffold00154 677016 2 TG GC scaffold766 ReadM SNP 0041.scaffold00154 677180 1 C T - ReadM SNP 0041.scaffold00154 677196 1 C T - ReadM SNP 0041.scaffold00154 677353 1 T C - ReadM SNP 0041.scaffold00154 677378 1 G A - ScafM SNP 0041.scaffold00154 677597 2 TT AA scaffold766 ScafM INDEL 0041.scaffold00154 677934 6 GAGAGA ...... scaffold766 Both SNP 0041.scaffold00154 677990 1 G A scaffold766 Both SNP 0041.scaffold00154 678042 1 C A scaffold766 Both SNP 0041.scaffold00154 678341 1 C A scaffold766 ReadM SNP 0041.scaffold00154 678562 1 C T - ReadM SNP 0041.scaffold00154 678575 1 C T - ReadM SNP 0041.scaffold00154 679052 1 T C - Both SNP 0041.scaffold00154 679426 1 T C scaffold766 Both SNP 0041.scaffold00154 679481 1 C A scaffold766 ReadM SNP 0041.scaffold00154 679729 1 G A - ReadM INDEL 0041.scaffold00154 679846 1 C . - ReadM SNP 0041.scaffold00154 679953 1 G A - ReadM SNP 0041.scaffold00154 680189 1 G A - ReadM SNP 0041.scaffold00154 680290 1 C T - ReadM SNP 0041.scaffold00154 680389 1 G T - ReadM SNP 0041.scaffold00154 680637 1 A G - ReadM SNP 0041.scaffold00154 680735 1 T C - ReadM SNP 0041.scaffold00154 680821 1 T C - ReadM SNP 0041.scaffold00154 680976 1 C T - ReadM SNP 0041.scaffold00154 681235 1 A G - ReadM SNP 0041.scaffold00154 681293 1 A T - ReadM SNP 0041.scaffold00154 681530 1 T G - ReadM SNP 0041.scaffold00154 681650 1 A G - ReadM INDEL 0041.scaffold00154 681757 1 . A - ReadM SNP 0041.scaffold00154 682131 1 A G - ReadM SNP 0041.scaffold00154 682138 1 G T - ReadM SNP 0041.scaffold00154 682538 1 A C - ReadM SNP 0041.scaffold00154 682628 1 G A - ReadM SNP 0041.scaffold00154 682736 1 G T - ReadM INDEL 0041.scaffold00154 682859 1 . G - ReadM SNP 0041.scaffold00154 683125 1 G T - ReadM SNP 0041.scaffold00154 683315 1 C T - ReadM SNP 0041.scaffold00154 683381 1 G A - ReadM SNP 0041.scaffold00154 683586 1 G A - ReadM SNP 0041.scaffold00154 683745 1 C T - ReadM SNP 0041.scaffold00154 683837 1 G A - ReadM SNP 0041.scaffold00154 683863 1 A T - ReadM SNP 0041.scaffold00154 683934 1 T C - ReadM SNP 0041.scaffold00154 684033 1 T C - ReadM INDEL 0041.scaffold00154 684058 1 G . - ReadM SNP 0041.scaffold00154 684193 1 T C - Both SNP 0041.scaffold00154 684289 1 G T scaffold766 Both INDEL 0041.scaffold00154 684394 2 TT .. scaffold766 ReadM SNP 0041.scaffold00154 684515 1 A T - Both SNP 0041.scaffold00154 684831 1 C T scaffold766 Both SNP 0041.scaffold00154 684954 1 G T scaffold766 Both SNP 0041.scaffold00154 685044 1 T A scaffold766 Both SNP 0041.scaffold00154 685226 1 G A scaffold766 Both SNP 0041.scaffold00154 685321 1 G A scaffold766 Both SNP 0041.scaffold00154 685643 1 G T scaffold766 ScafM SNP 0041.scaffold00154 685900 1 C G scaffold766 Both SNP 0041.scaffold00154 685954 1 A C scaffold766 Both SNP 0041.scaffold00154 686078 1 G A scaffold766 Both SNP 0041.scaffold00154 686352 1 T A scaffold766 Both SNP 0041.scaffold00154 686760 1 G A scaffold766 ReadM SNP 0041.scaffold00154 686894 1 T C - ReadM SNP 0041.scaffold00154 686973 1 C T - ReadM SNP 0041.scaffold00154 687014 1 C T - ReadM SNP 0041.scaffold00154 687223 1 C T - Both SNP 0041.scaffold00154 687353 1 C T scaffold766 Both SNP 0041.scaffold00154 687386 1 T C scaffold766 Both SNP 0041.scaffold00154 687503 1 A C scaffold766 Both SNP 0041.scaffold00154 687742 1 T G scaffold766 Both SNP 0041.scaffold00154 688211 1 T C scaffold766 Both SNP 0041.scaffold00154 688247 1 A G scaffold766 Both SNP 0041.scaffold00154 688351 1 G A scaffold766 Both SNP 0041.scaffold00154 688373 1 C A scaffold766 Both INDEL 0041.scaffold00154 688451 1 C . scaffold766 Both INDEL 0041.scaffold00154 688717 1 C . scaffold766 Both SNP 0041.scaffold00154 688727 1 T C scaffold766 ScafM SNP 0041.scaffold00154 688738 1 A G scaffold766 ScafM SNP 0041.scaffold00154 688747 1 A T scaffold766 Both SNP 0041.scaffold00154 688778 1 G A scaffold766 Both SNP 0041.scaffold00154 688932 1 T C scaffold766 Both SNP 0041.scaffold00154 688946 1 C A scaffold766 Both INDEL 0041.scaffold00154 689093 1 . G scaffold766 ScafM SNP 0041.scaffold00154 689095 2 AC TT scaffold766 ReadM SNP 0041.scaffold00154 689185 1 G A - ReadM SNP 0041.scaffold00154 689629 1 C G - ReadM SNP 0041.scaffold00154 689687 1 A C - ReadM SNP 0041.scaffold00154 689755 1 T C - ReadM SNP 0041.scaffold00154 689785 1 C T - ReadM SNP 0041.scaffold00154 689800 1 G A - ScafM SNP 0041.scaffold00154 690117 1 G A scaffold766 ReadM SNP 0041.scaffold00154 690892 1 C T - ReadM SNP 0041.scaffold00154 690920 1 G C - ReadM SNP 0041.scaffold00154 691153 1 T C - ReadM SNP 0041.scaffold00154 691166 1 A T - ReadM SNP 0041.scaffold00154 691194 1 T A - ReadM SNP 0041.scaffold00154 691535 1 G T - ReadM SNP 0041.scaffold00154 691579 1 A G - ReadM SNP 0041.scaffold00154 691612 1 G A - ReadM SNP 0041.scaffold00154 691693 1 G A - ReadM SNP 0041.scaffold00154 691845 1 C T - ReadM SNP 0041.scaffold00154 691884 1 A G - ReadM SNP 0041.scaffold00154 692027 1 A G - ReadM INDEL 0041.scaffold00154 692128 1 G . - ReadM SNP 0041.scaffold00154 692511 1 T C - ReadM SNP 0041.scaffold00154 692604 1 T C - ReadM SNP 0041.scaffold00154 692663 1 A G - ReadM SNP 0041.scaffold00154 692714 1 T C - ReadM SNP 0041.scaffold00154 692817 1 T C - ReadM SNP 0041.scaffold00154 692864 1 A C - ReadM SNP 0041.scaffold00154 693093 1 G A - ReadM SNP 0041.scaffold00154 693197 1 A G - ReadM SNP 0041.scaffold00154 693410 1 A C - ReadM SNP 0041.scaffold00154 693431 1 G C - ReadM SNP 0041.scaffold00154 693583 1 C T - ReadM SNP 0041.scaffold00154 693903 1 A G - ReadM SNP 0041.scaffold00154 694235 1 C T - ReadM SNP 0041.scaffold00154 694269 1 T C - ReadM SNP 0041.scaffold00154 694298 1 C T - Both SNP 0041.scaffold00154 694595 1 T C scaffold766 Both SNP 0041.scaffold00154 694655 1 G A scaffold766 Both SNP 0041.scaffold00154 694776 1 G C scaffold766 Both SNP 0041.scaffold00154 694934 1 G T scaffold766 ReadM SNP 0041.scaffold00154 694966 1 G T - ReadM SNP 0041.scaffold00154 695005 1 A G - ReadM INDEL 0041.scaffold00154 695028 1 T . - ReadM SNP 0041.scaffold00154 695048 1 G A - ReadM INDEL 0041.scaffold00154 695531 1 A . - ReadM SNP 0041.scaffold00154 695584 1 G A - ScafM SNP 0041.scaffold00154 695761 1 C T scaffold766 ScafM SNP 0041.scaffold00154 695765 1 C T scaffold766 ReadM SNP 0041.scaffold00154 695941 1 A G - ReadM SNP 0041.scaffold00154 696096 1 T C - ReadM SNP 0041.scaffold00154 696419 1 T C - Both SNP 0041.scaffold00154 696843 1 A C scaffold766 ReadM INDEL 0041.scaffold00154 696870 1 G . - ScafM INDEL 0041.scaffold00154 696870 2 GT .A scaffold766 ReadM SNP 0041.scaffold00154 696983 1 C T - ReadM SNP 0041.scaffold00154 696995 1 C T - ReadM SNP 0041.scaffold00154 697086 1 T C - ReadM SNP 0041.scaffold00154 697159 1 T A - Both SNP 0041.scaffold00154 697241 1 G A scaffold766 Both SNP 0041.scaffold00154 697416 1 T C scaffold766 Both SNP 0041.scaffold00154 697632 1 C T scaffold766 Both SNP 0041.scaffold00154 697638 1 A T scaffold766 Both SNP 0041.scaffold00154 697661 1 T G scaffold766 ScafM SNP 0041.scaffold00154 697678 1 C A scaffold766 ScafM SNP 0041.scaffold00154 697717 1 A T scaffold766 ScafM SNP 0041.scaffold00154 697750 1 T C scaffold766 ReadM SNP 0041.scaffold00154 697865 1 A T - ScafM SNP 0041.scaffold00154 697978 1 A G scaffold766 Both INDEL 0041.scaffold00154 697994 1 A . scaffold766 Both SNP 0041.scaffold00154 698007 1 G A scaffold766 Both SNP 0041.scaffold00154 698167 1 C T scaffold766 Both SNP 0041.scaffold00154 698194 1 A G scaffold766 Both SNP 0041.scaffold00154 698306 1 T G scaffold766 Both SNP 0041.scaffold00154 698395 1 T A scaffold766 Both SNP 0041.scaffold00154 698448 1 C G scaffold766 Both SNP 0041.scaffold00154 698466 1 C T scaffold766 Both SNP 0041.scaffold00154 698542 1 G A scaffold766 Both SNP 0041.scaffold00154 698548 1 A T scaffold766 Both SNP 0041.scaffold00154 698551 1 A G scaffold766 Both SNP 0041.scaffold00154 698611 1 G A scaffold766 Both SNP 0041.scaffold00154 698830 1 T C scaffold766 Both SNP 0041.scaffold00154 698890 1 A G scaffold766 Both SNP 0041.scaffold00154 698932 1 C T scaffold766 ScafM SNP 0041.scaffold00154 699006 2 AG GT scaffold766 Both SNP 0041.scaffold00154 699061 1 T A scaffold766 Both SNP 0041.scaffold00154 699205 1 A G scaffold766 Both SNP 0041.scaffold00154 699271 1 T C scaffold766 Both SNP 0041.scaffold00154 699281 1 A G scaffold766 Both SNP 0041.scaffold00154 699336 1 C A scaffold766 Both SNP 0041.scaffold00154 699379 1 C G scaffold766 Both SNP 0041.scaffold00154 699445 1 T C scaffold766 Both SNP 0041.scaffold00154 699702 1 T C scaffold766 Both SNP 0041.scaffold00154 699709 1 C G scaffold766 Both SNP 0041.scaffold00154 699730 1 C T scaffold766 ScafM SNP 0041.scaffold00154 699781 1 G C scaffold766 ScafM SNP 0041.scaffold00154 699790 1 G C scaffold766 Both SNP 0041.scaffold00154 699811 1 G C scaffold766 ScafM SNP 0041.scaffold00154 699819 1 C T scaffold766 Both SNP 0041.scaffold00154 699983 1 C G scaffold766 Both SNP 0041.scaffold00154 700228 1 G A scaffold766 Both SNP 0041.scaffold00154 700300 1 A G scaffold766 Both SNP 0041.scaffold00154 700342 1 T G scaffold766 Both SNP 0041.scaffold00154 700369 1 T C scaffold766 ScafM SNP 0041.scaffold00154 700448 1 A C scaffold766 ScafM INDEL 0041.scaffold00154 700450 1 G . scaffold766 ScafM INDEL 0041.scaffold00154 700453 4 TATT .... scaffold766 ScafM INDEL 0041.scaffold00154 700459 3 CTG ... scaffold766 ScafM INDEL 0041.scaffold00154 700466 1 C . scaffold766 ScafM INDEL 0041.scaffold00154 700469 1 T . scaffold766 ScafM SNP 0041.scaffold00154 700472 3 TTA GGC scaffold766 ScafM INDEL 0041.scaffold00154 700476 6 TTAGAA .....C scaffold766 ScafM INDEL 0041.scaffold00154 700487 2 GA .. scaffold766 ScafM INDEL 0041.scaffold00154 700491 3 ACC ... scaffold766 ScafM INDEL 0041.scaffold00154 700495 3 GAG .TT scaffold766 ScafM SNP 0041.scaffold00154 700506 1 A C scaffold766 ScafM INDEL 0041.scaffold00154 700507 2 .A GC scaffold766 ScafM SNP 0041.scaffold00154 700510 1 T A scaffold766 ScafM INDEL 0041.scaffold00154 700514 3 GTG ..A scaffold766 ScafM SNP 0041.scaffold00154 700518 1 C A scaffold766 ScafM INDEL 0041.scaffold00154 700520 2 CA .T scaffold766 ScafM INDEL 0041.scaffold00154 700524 2 TT .A scaffold766 ScafM SNP 0041.scaffold00154 700527 2 GT AC scaffold766 ScafM SNP 0041.scaffold00154 700530 3 TTT ACA scaffold766 ScafM SNP 0041.scaffold00154 700534 1 A C scaffold766 ScafM SNP 0041.scaffold00154 700538 1 A C scaffold766 ScafM INDEL 0041.scaffold00154 700541 3 GCA ... scaffold766 ScafM INDEL 0041.scaffold00154 700546 1 C . scaffold766 ScafM INDEL 0041.scaffold00154 700548 1 C . scaffold766 ScafM SNP 0041.scaffold00154 700550 1 A G scaffold766 ScafM INDEL 0041.scaffold00154 700553 2 AA .. scaffold766 ScafM SNP 0041.scaffold00154 700566 1 G A scaffold766 ScafM SNP 0041.scaffold00154 700604 1 C T scaffold766 ScafM INDEL 0041.scaffold00154 700612 10 TGCCAATATA .......... scaffold766 ScafM SNP 0041.scaffold00154 700634 1 A G scaffold766 ScafM SNP 0041.scaffold00154 700651 1 C A scaffold766 ScafM SNP 0041.scaffold00154 700672 1 T C scaffold766 ScafM SNP 0041.scaffold00154 700693 1 A C scaffold766 ScafM SNP 0041.scaffold00154 700715 1 C T scaffold766 ScafM SNP 0041.scaffold00154 700726 1 A G scaffold766 Both SNP 0041.scaffold00154 700788 1 C T scaffold766 ScafM SNP 0041.scaffold00154 700805 1 C T scaffold766 ScafM SNP 0041.scaffold00154 700808 1 C A scaffold766 Both SNP 0041.scaffold00154 700839 1 A C scaffold766 ScafM SNP 0041.scaffold00154 700868 1 A G scaffold766 ScafM SNP 0041.scaffold00154 700874 1 G A scaffold766 Both INDEL 0041.scaffold00154 700922 1 . A scaffold766 Both SNP 0041.scaffold00154 700944 1 T C scaffold766 ReadM SNP 0041.scaffold00154 701161 1 A G - ReadM SNP 0041.scaffold00154 701252 1 C A - ReadM SNP 0041.scaffold00154 701289 1 C A - ReadM SNP 0041.scaffold00154 701322 1 G A - Both SNP 0041.scaffold00154 701420 1 C T scaffold766 Both SNP 0041.scaffold00154 701446 1 C T scaffold766 Both SNP 0041.scaffold00154 701452 1 T A scaffold766 ScafM INDEL 0041.scaffold00154 701480 25 ......................... TGCAAACATCTATTAGATAGATGTT scaffold766 ScafM INDEL 0041.scaffold00154 701744 1 . A scaffold766 Both SNP 0041.scaffold00154 702006 1 G A scaffold766 Both SNP 0041.scaffold00154 702071 1 C G scaffold766 Both SNP 0041.scaffold00154 702099 1 G T scaffold766 Both SNP 0041.scaffold00154 702160 1 A G scaffold766 ReadM SNP 0041.scaffold00154 702575 1 G A - ReadM SNP 0041.scaffold00154 703389 1 T C - ReadM SNP 0041.scaffold00154 703781 1 C A - Both SNP 0041.scaffold00154 703826 1 G C scaffold766 Both SNP 0041.scaffold00154 703860 1 G A scaffold766 Both SNP 0041.scaffold00154 703874 1 A T scaffold766 Both SNP 0041.scaffold00154 703950 1 T C scaffold766 ScafM INDEL 0041.scaffold00154 704050 4 ATCG .... scaffold766 Both SNP 0041.scaffold00154 704215 1 G A scaffold766 Both SNP 0041.scaffold00154 704299 1 C G scaffold766 Both SNP 0041.scaffold00154 704348 1 C T scaffold766 ReadM SNP 0041.scaffold00154 704539 1 C T - ReadM SNP 0041.scaffold00154 704542 1 T C - ReadM SNP 0041.scaffold00154 704576 1 C G - ReadM SNP 0041.scaffold00154 704694 1 C A - ReadM SNP 0041.scaffold00154 704766 1 T A - ScafM SNP 0041.scaffold00154 704901 2 AG TT scaffold766 Both SNP 0041.scaffold00154 704948 1 T A scaffold766 Both SNP 0041.scaffold00154 705001 1 A T scaffold766 Both INDEL 0041.scaffold00154 705073 1 . A scaffold766 ReadM SNP 0041.scaffold00154 705318 1 A T - ReadM INDEL 0041.scaffold00154 705452 2 .. GA - ReadM SNP 0041.scaffold00154 705657 1 A G - ReadM SNP 0041.scaffold00154 705689 1 A G - ReadM SNP 0041.scaffold00154 705819 1 C A - ReadM SNP 0041.scaffold00154 705825 1 G T - ReadM SNP 0041.scaffold00154 705944 1 C G - ReadM INDEL 0041.scaffold00154 706189 1 . T - ReadM SNP 0041.scaffold00154 706394 1 C T - Both SNP 0041.scaffold00154 706447 1 T A scaffold766 Both SNP 0041.scaffold00154 706458 1 G A scaffold766 Both SNP 0041.scaffold00154 706496 1 A G scaffold766 Both SNP 0041.scaffold00154 706501 1 G T scaffold766 Both SNP 0041.scaffold00154 706625 1 C G scaffold766 ReadM SNP 0041.scaffold00154 706675 1 G A - ReadM SNP 0041.scaffold00154 706998 1 A G - ReadM SNP 0041.scaffold00154 707004 1 T C - ReadM SNP 0041.scaffold00154 707082 1 A C - ReadM SNP 0041.scaffold00154 707118 1 A G - ReadM SNP 0041.scaffold00154 707132 1 A G - ScafM SNP 0041.scaffold00154 707302 1 C T scaffold766 ScafM SNP 0041.scaffold00154 707308 1 A G scaffold766 ReadM SNP 0041.scaffold00154 707496 1 A T - ScafM INDEL 0041.scaffold00154 707556 1 T . scaffold766 ScafM INDEL 0041.scaffold00154 707593 20 GATGAGCGACGGTGGTGACG .................... scaffold766 ScafM INDEL 0041.scaffold00154 707614 7 TTTTTTC ....... scaffold766 ScafM SNP 0041.scaffold00154 707630 1 G A scaffold766 ScafM SNP 0041.scaffold00154 707643 1 A C scaffold766 Both SNP 0041.scaffold00154 707766 1 T C scaffold766 ReadM SNP 0041.scaffold00154 708074 1 A T - ReadM SNP 0041.scaffold00154 708208 1 C A - ReadM SNP 0041.scaffold00154 708264 1 C A - ReadM SNP 0041.scaffold00154 708346 1 G T - ReadM SNP 0041.scaffold00154 708420 1 C T - ReadM SNP 0041.scaffold00154 708450 1 G C - ReadM SNP 0041.scaffold00154 708469 1 C G - ReadM SNP 0041.scaffold00154 708651 1 C A - ReadM SNP 0041.scaffold00154 708656 1 C T - ReadM SNP 0041.scaffold00154 708760 1 A C - Both SNP 0041.scaffold00154 709102 1 T G scaffold766 Both SNP 0041.scaffold00154 709389 1 T G scaffold766 Both SNP 0041.scaffold00154 709417 1 A G scaffold766 Both SNP 0041.scaffold00154 709612 1 G A scaffold766 Both SNP 0041.scaffold00154 709742 1 G T scaffold766 ScafM INDEL 0041.scaffold00154 709819 1 T . scaffold766 Both SNP 0041.scaffold00154 709834 1 G A scaffold766 ScafM INDEL 0041.scaffold00154 709857 2 TT .. scaffold766 Both SNP 0041.scaffold00154 709955 1 C G scaffold766 Both SNP 0041.scaffold00154 710044 1 T C scaffold766 ReadM SNP 0041.scaffold00154 710091 1 T C - ReadM SNP 0041.scaffold00154 710182 1 G T - ReadM SNP 0041.scaffold00154 710210 1 C G - ReadM SNP 0041.scaffold00154 710657 1 G A - ReadM INDEL 0041.scaffold00154 710725 1 . A - ReadM SNP 0041.scaffold00154 710863 1 C T - ReadM SNP 0041.scaffold00154 711027 1 G A - ReadM SNP 0041.scaffold00154 711216 1 G A - ReadM SNP 0041.scaffold00154 711268 1 C T - ReadM SNP 0041.scaffold00154 711320 1 G A - ReadM SNP 0041.scaffold00154 711402 1 C T - ReadM SNP 0041.scaffold00154 711423 1 C T - ReadM SNP 0041.scaffold00154 711663 1 C G - ReadM SNP 0041.scaffold00154 711710 1 C T - ReadM SNP 0041.scaffold00154 711724 1 A C - Both SNP 0041.scaffold00154 711832 1 T C scaffold766 ScafM SNP 0041.scaffold00154 711941 1 C A scaffold766 Both SNP 0041.scaffold00154 712043 1 G A scaffold766 Both INDEL 0041.scaffold00154 712099 2 TT .. scaffold766 Both SNP 0041.scaffold00154 712141 1 A G scaffold766 Both SNP 0041.scaffold00154 712164 1 T A scaffold766 Both SNP 0041.scaffold00154 712210 1 T C scaffold766 ReadM SNP 0041.scaffold00154 712286 1 A G - Both SNP 0041.scaffold00154 712457 1 A G scaffold766 Both SNP 0041.scaffold00154 712459 1 A C scaffold766 Both SNP 0041.scaffold00154 712637 1 C G scaffold766 Both SNP 0041.scaffold00154 712667 1 G A scaffold766 Both SNP 0041.scaffold00154 712863 1 A T scaffold766 Both SNP 0041.scaffold00154 712927 1 A G scaffold766 Both SNP 0041.scaffold00154 712932 1 G C scaffold766 ReadM SNP 0041.scaffold00154 713178 1 C T - ReadM SNP 0041.scaffold00154 713197 1 G A - ReadM SNP 0041.scaffold00154 713349 2 TT AC - ReadM SNP 0041.scaffold00154 713468 1 T C - ReadM SNP 0041.scaffold00154 713514 1 A G - ReadM SNP 0041.scaffold00154 713544 1 G A - Both SNP 0041.scaffold00154 713640 1 C T scaffold766 Both SNP 0041.scaffold00154 713749 1 G C scaffold766 Both SNP 0041.scaffold00154 713754 1 A C scaffold766 ScafM SNP 0041.scaffold00154 713861 2 CC AT scaffold766 Both SNP 0041.scaffold00154 713933 1 T C scaffold766 Both SNP 0041.scaffold00154 713938 1 A T scaffold766 Both SNP 0041.scaffold00154 713999 1 C A scaffold766 Both SNP 0041.scaffold00154 714020 1 C G scaffold766 Both SNP 0041.scaffold00154 714140 1 T C scaffold766 Both SNP 0041.scaffold00154 714151 1 C T scaffold766 ReadM SNP 0041.scaffold00154 714270 1 T G - ReadM SNP 0041.scaffold00154 714272 1 T C - ReadM SNP 0041.scaffold00154 714336 1 G A - ReadM SNP 0041.scaffold00154 714522 1 A G - ScafM SNP 0041.scaffold00154 714664 1 A G scaffold766 ScafM INDEL 0041.scaffold00154 714725 4 .... GGGA scaffold766 ScafM SNP 0041.scaffold00154 714746 1 A G scaffold766 Both SNP 0041.scaffold00154 714761 1 C G scaffold766 ScafM SNP 0041.scaffold00154 714814 1 T C scaffold766 ScafM SNP 0041.scaffold00154 714839 1 G A scaffold766 ReadM SNP 0041.scaffold00154 715115 1 C A - ReadM SNP 0041.scaffold00154 715132 1 C T - ScafM SNP 0041.scaffold00154 715182 1 A C scaffold5395 ScafM SNP 0041.scaffold00154 715196 1 A T scaffold5395 ScafM SNP 0041.scaffold00154 715201 1 T A scaffold5395 ScafM SNP 0041.scaffold00154 715439 1 G A scaffold5395 Both SNP 0041.scaffold00154 715574 1 G C scaffold5395 Both SNP 0041.scaffold00154 715610 1 G A scaffold5395 Both SNP 0041.scaffold00154 715621 1 C T scaffold5395 Both SNP 0041.scaffold00154 715826 1 T C scaffold5395 Both SNP 0041.scaffold00154 715971 1 G A scaffold5395 Both SNP 0041.scaffold00154 716392 1 G A scaffold5395 Both INDEL 0041.scaffold00154 716555 1 . A scaffold5395 ScafM SNP 0041.scaffold00154 716827 1 C T scaffold5395 Both SNP 0041.scaffold00154 716941 1 G C scaffold5395 Both SNP 0041.scaffold00154 717207 1 A G scaffold5395 ReadM INDEL 0041.scaffold00154 717262 1 . C - ReadM SNP 0041.scaffold00154 717295 1 T G - ReadM INDEL 0041.scaffold00154 717353 1 T . - Both SNP 0041.scaffold00154 717561 1 A T scaffold5395 ScafM INDEL 0041.scaffold00154 717570 4 .... AAAT scaffold5395 ScafM INDEL 0041.scaffold00154 717614 8 CTGTTATG ........ scaffold5395 Both SNP 0041.scaffold00154 717662 1 G C scaffold5395 Both SNP 0041.scaffold00154 717671 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 717739 1 T G scaffold5395 ScafM INDEL 0041.scaffold00154 717750 23 AACTTGTGCGTGGGACTTGGACT ....................... scaffold5395 Both SNP 0041.scaffold00154 717871 1 A T scaffold5395 Both SNP 0041.scaffold00154 717897 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 717914 1 C T scaffold5395 ScafM INDEL 0041.scaffold00154 717923 2 .G AT scaffold5395 ScafM SNP 0041.scaffold00154 717963 1 G A scaffold5395 ScafM SNP 0041.scaffold00154 717966 1 C T scaffold5395 Both SNP 0041.scaffold00154 717995 1 C T scaffold5395 ScafM SNP 0041.scaffold00154 718025 1 G T scaffold5395 Both SNP 0041.scaffold00154 718178 1 A G scaffold5395 Both SNP 0041.scaffold00154 718252 1 G A scaffold5395 Both SNP 0041.scaffold00154 718256 1 A G scaffold5395 Both SNP 0041.scaffold00154 718333 1 G A scaffold5395 ScafM SNP 0041.scaffold00154 718560 1 C G scaffold5395 ScafM SNP 0041.scaffold00154 718625 1 C T scaffold5395 Both SNP 0041.scaffold00154 718889 1 A T scaffold5395 ScafM SNP 0041.scaffold00154 719059 1 T C scaffold5395 ScafM SNP 0041.scaffold00154 724229 1 T A scaffold5395 ScafM SNP 0041.scaffold00154 724377 1 T G scaffold5395 ScafM SNP 0041.scaffold00154 724405 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 724423 1 G T scaffold5395 ScafM SNP 0041.scaffold00154 724481 1 C T scaffold5395 ReadM SNP 0041.scaffold00154 724537 1 G A - Both SNP 0041.scaffold00154 724716 1 G A scaffold5395 Both INDEL 0041.scaffold00154 724833 1 A . scaffold5395 Both INDEL 0041.scaffold00154 724947 3 ATG ... scaffold5395 Both SNP 0041.scaffold00154 725009 1 C G scaffold5395 Both SNP 0041.scaffold00154 725123 1 C A scaffold5395 Both SNP 0041.scaffold00154 725141 1 C A scaffold5395 Both SNP 0041.scaffold00154 725145 1 C G scaffold5395 Both SNP 0041.scaffold00154 725221 1 G A scaffold5395 Both SNP 0041.scaffold00154 725292 1 T A scaffold5395 Both SNP 0041.scaffold00154 725338 1 C T scaffold5395 ScafM SNP 0041.scaffold00154 725397 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 725404 2 AA GG scaffold5395 Both SNP 0041.scaffold00154 725426 1 T G scaffold5395 Both SNP 0041.scaffold00154 725458 1 T C scaffold5395 Both SNP 0041.scaffold00154 725527 1 T C scaffold5395 ScafM SNP 0041.scaffold00154 725565 1 T C scaffold5395 ScafM SNP 0041.scaffold00154 725567 1 G C scaffold5395 ScafM SNP 0041.scaffold00154 725590 1 A G scaffold5395 Both SNP 0041.scaffold00154 725617 1 G C scaffold5395 Both SNP 0041.scaffold00154 725670 1 C T scaffold5395 Both SNP 0041.scaffold00154 725734 1 T C scaffold5395 Both SNP 0041.scaffold00154 725756 1 A C scaffold5395 Both SNP 0041.scaffold00154 725837 1 C A scaffold5395 ReadM SNP 0041.scaffold00154 726595 1 A C - ReadM SNP 0041.scaffold00154 726627 1 G T - ReadM SNP 0041.scaffold00154 727200 1 G T - ScafM SNP 0041.scaffold00154 727712 1 A G scaffold5395 ReadM SNP 0041.scaffold00154 729169 1 A G - ReadM SNP 0041.scaffold00154 729326 1 C T - ReadM SNP 0041.scaffold00154 729333 1 G A - ReadM SNP 0041.scaffold00154 729345 1 A C - ReadM SNP 0041.scaffold00154 729492 1 A G - ReadM SNP 0041.scaffold00154 729513 1 A G - ReadM SNP 0041.scaffold00154 729674 1 A T - ReadM SNP 0041.scaffold00154 729718 1 G T - ScafM SNP 0041.scaffold00154 729814 1 G C scaffold5395 ScafM SNP 0041.scaffold00154 729816 1 C G scaffold5395 Both SNP 0041.scaffold00154 729918 1 C G scaffold5395 Both SNP 0041.scaffold00154 729963 1 A C scaffold5395 Both SNP 0041.scaffold00154 730142 1 C T scaffold5395 Both SNP 0041.scaffold00154 730160 1 C A scaffold5395 Both INDEL 0041.scaffold00154 730244 1 A . scaffold5395 ReadM SNP 0041.scaffold00154 730397 1 G A - ReadM SNP 0041.scaffold00154 730460 1 C T - ReadM SNP 0041.scaffold00154 730474 1 T C - ReadM SNP 0041.scaffold00154 730583 1 A G - ReadM SNP 0041.scaffold00154 730630 1 C G - ReadM SNP 0041.scaffold00154 730637 1 A G - ReadM SNP 0041.scaffold00154 730658 1 C T - ReadM SNP 0041.scaffold00154 730713 1 C T - ReadM SNP 0041.scaffold00154 730763 1 G T - ReadM SNP 0041.scaffold00154 730866 1 C A - ReadM SNP 0041.scaffold00154 730882 1 C T - ReadM SNP 0041.scaffold00154 730956 1 G A - ReadM SNP 0041.scaffold00154 731066 1 A G - ReadM SNP 0041.scaffold00154 731183 1 C T - ReadM SNP 0041.scaffold00154 731192 1 A G - ReadM SNP 0041.scaffold00154 731256 1 C A - Both SNP 0041.scaffold00154 731385 1 A G scaffold5395 Both SNP 0041.scaffold00154 731405 1 C G scaffold5395 Both SNP 0041.scaffold00154 731423 1 T C scaffold5395 Both SNP 0041.scaffold00154 731437 1 T C scaffold5395 Both SNP 0041.scaffold00154 731507 1 T C scaffold5395 Both SNP 0041.scaffold00154 731569 1 T G scaffold5395 ReadM SNP 0041.scaffold00154 731711 1 G C - ReadM SNP 0041.scaffold00154 731844 1 T C - ReadM SNP 0041.scaffold00154 732002 1 A G - ReadM SNP 0041.scaffold00154 732013 1 T G - ReadM SNP 0041.scaffold00154 732063 1 T G - ReadM SNP 0041.scaffold00154 732194 1 A C - ReadM SNP 0041.scaffold00154 734446 1 T G - ReadM SNP 0041.scaffold00154 734507 1 A T - ReadM SNP 0041.scaffold00154 734582 1 T A - ReadM SNP 0041.scaffold00154 734586 1 A C - ReadM SNP 0041.scaffold00154 735854 1 A G - ReadM SNP 0041.scaffold00154 736025 1 A G - ReadM SNP 0041.scaffold00154 736078 1 T C - ReadM SNP 0041.scaffold00154 736150 1 T G - ReadM SNP 0041.scaffold00154 736170 1 A C - ReadM SNP 0041.scaffold00154 736206 1 T C - ReadM SNP 0041.scaffold00154 736278 1 A G - ReadM SNP 0041.scaffold00154 736310 1 C T - ReadM SNP 0041.scaffold00154 736313 1 T A - ReadM SNP 0041.scaffold00154 736651 1 T C - ReadM SNP 0041.scaffold00154 736669 1 A G - ReadM SNP 0041.scaffold00154 736745 1 G T - ReadM SNP 0041.scaffold00154 736752 1 T A - ReadM SNP 0041.scaffold00154 736763 1 A G - ReadM SNP 0041.scaffold00154 736917 1 A G - ReadM SNP 0041.scaffold00154 736970 1 A G - ReadM SNP 0041.scaffold00154 737110 1 T A - ReadM SNP 0041.scaffold00154 737160 1 G T - ReadM SNP 0041.scaffold00154 737203 1 A T - Both SNP 0041.scaffold00154 737319 1 A G scaffold5395 ReadM SNP 0041.scaffold00154 737401 1 T C - ReadM SNP 0041.scaffold00154 737410 1 A G - ReadM SNP 0041.scaffold00154 737415 1 C A - ReadM SNP 0041.scaffold00154 737503 1 G A - Both SNP 0041.scaffold00154 737846 1 A T scaffold5395 Both SNP 0041.scaffold00154 737960 1 C A scaffold5395 Both SNP 0041.scaffold00154 738001 1 A G scaffold5395 ReadM INDEL 0041.scaffold00154 738230 1 A . - ReadM SNP 0041.scaffold00154 738245 1 C G - ReadM SNP 0041.scaffold00154 738271 1 G C - ReadM SNP 0041.scaffold00154 738393 1 C T - ReadM SNP 0041.scaffold00154 738421 1 G T - ReadM SNP 0041.scaffold00154 738712 1 C T - ReadM INDEL 0041.scaffold00154 738816 1 T . - ReadM SNP 0041.scaffold00154 738837 1 A T - ReadM SNP 0041.scaffold00154 738840 1 C A - ReadM SNP 0041.scaffold00154 738874 1 T A - ReadM SNP 0041.scaffold00154 738883 1 C A - ReadM SNP 0041.scaffold00154 738948 1 C G - ReadM SNP 0041.scaffold00154 739034 1 G A - ReadM SNP 0041.scaffold00154 739061 1 G A - ReadM SNP 0041.scaffold00154 739101 1 T G - ReadM SNP 0041.scaffold00154 739189 1 A G - ReadM SNP 0041.scaffold00154 739255 1 C A - ReadM SNP 0041.scaffold00154 739284 1 A G - ReadM SNP 0041.scaffold00154 739439 1 C A - ReadM SNP 0041.scaffold00154 739443 1 C T - ReadM SNP 0041.scaffold00154 739625 1 C T - ReadM SNP 0041.scaffold00154 739634 1 G T - ReadM SNP 0041.scaffold00154 739722 1 G A - ReadM SNP 0041.scaffold00154 739795 1 A G - ReadM SNP 0041.scaffold00154 739855 1 G A - ReadM SNP 0041.scaffold00154 739942 1 C T - ReadM SNP 0041.scaffold00154 740152 1 G T - ReadM SNP 0041.scaffold00154 740229 1 C T - ReadM SNP 0041.scaffold00154 740279 1 C T - ReadM INDEL 0041.scaffold00154 740505 1 A . - ReadM SNP 0041.scaffold00154 740548 1 G A - ReadM SNP 0041.scaffold00154 740610 1 A G - ReadM SNP 0041.scaffold00154 740745 1 T C - ReadM SNP 0041.scaffold00154 740748 1 G A - ReadM INDEL 0041.scaffold00154 740862 1 G . - ReadM SNP 0041.scaffold00154 740946 1 A G - ReadM SNP 0041.scaffold00154 741026 1 A G - ReadM SNP 0041.scaffold00154 741083 1 T C - ReadM SNP 0041.scaffold00154 741102 1 C T - ReadM SNP 0041.scaffold00154 741167 1 G A - ReadM SNP 0041.scaffold00154 741256 1 T G - ReadM SNP 0041.scaffold00154 741437 1 A G - ReadM SNP 0041.scaffold00154 741555 1 T A - ReadM SNP 0041.scaffold00154 741584 1 A G - ReadM SNP 0041.scaffold00154 741689 1 G T - ReadM SNP 0041.scaffold00154 741741 1 T G - ReadM SNP 0041.scaffold00154 741873 1 A C - ReadM SNP 0041.scaffold00154 742038 1 T A - ReadM SNP 0041.scaffold00154 742042 1 G A - ReadM SNP 0041.scaffold00154 742085 1 G A - ReadM SNP 0041.scaffold00154 742112 1 C G - ReadM SNP 0041.scaffold00154 742125 1 C T - ReadM INDEL 0041.scaffold00154 742216 1 . T - ReadM SNP 0041.scaffold00154 742240 1 G C - ReadM SNP 0041.scaffold00154 742284 1 G A - ReadM SNP 0041.scaffold00154 742507 1 A G - ReadM SNP 0041.scaffold00154 742573 1 C T - ReadM SNP 0041.scaffold00154 742787 1 T C - ReadM SNP 0041.scaffold00154 742801 1 T A - ReadM SNP 0041.scaffold00154 742820 1 T C - ReadM SNP 0041.scaffold00154 743015 1 A G - ReadM SNP 0041.scaffold00154 743050 1 G A - ReadM SNP 0041.scaffold00154 743116 1 A T - ReadM SNP 0041.scaffold00154 743147 1 G A - ReadM SNP 0041.scaffold00154 743320 1 A G - ReadM SNP 0041.scaffold00154 743323 1 C T - ReadM SNP 0041.scaffold00154 743444 1 A G - ReadM SNP 0041.scaffold00154 743457 1 T A - ReadM SNP 0041.scaffold00154 743706 1 A C - ReadM SNP 0041.scaffold00154 743710 1 A C - ReadM SNP 0041.scaffold00154 743724 1 A T - ReadM SNP 0041.scaffold00154 743729 1 C T - ReadM SNP 0041.scaffold00154 744084 1 T G - ReadM SNP 0041.scaffold00154 744241 1 A G - ReadM SNP 0041.scaffold00154 744245 1 T A - ReadM SNP 0041.scaffold00154 744591 1 T G - ReadM SNP 0041.scaffold00154 744652 1 C T - ReadM SNP 0041.scaffold00154 745041 1 T A - ReadM SNP 0041.scaffold00154 745194 2 AA CG - ReadM SNP 0041.scaffold00154 745239 1 G A - ReadM SNP 0041.scaffold00154 745265 1 A C - ReadM SNP 0041.scaffold00154 745277 1 G A - ReadM SNP 0041.scaffold00154 745295 1 C A - ReadM SNP 0041.scaffold00154 745375 1 G C - ReadM SNP 0041.scaffold00154 745511 1 C A - Both SNP 0041.scaffold00154 745603 1 A T scaffold5395 ReadM SNP 0041.scaffold00154 745831 1 T A - ReadM SNP 0041.scaffold00154 745834 1 C T - ReadM SNP 0041.scaffold00154 745845 1 C T - ReadM SNP 0041.scaffold00154 745892 1 G C - ReadM SNP 0041.scaffold00154 746047 1 A T - ReadM SNP 0041.scaffold00154 746089 1 C A - ReadM SNP 0041.scaffold00154 746136 1 C G - ReadM SNP 0041.scaffold00154 746197 1 G A - ReadM SNP 0041.scaffold00154 746264 1 A G - ScafM INDEL 0041.scaffold00154 746346 29 ............................. CTATCCATAACTCCTAATATGGTAACCCT scaffold5395 Both SNP 0041.scaffold00154 746387 1 A C scaffold5395 Both SNP 0041.scaffold00154 746395 1 T C scaffold5395 Both SNP 0041.scaffold00154 746417 1 T C scaffold5395 Both SNP 0041.scaffold00154 746485 1 T A scaffold5395 ReadM SNP 0041.scaffold00154 746578 1 C A - ReadM SNP 0041.scaffold00154 746648 1 C G - ReadM SNP 0041.scaffold00154 746808 1 G A - ReadM SNP 0041.scaffold00154 746817 1 T A - ReadM SNP 0041.scaffold00154 746890 1 T C - ReadM SNP 0041.scaffold00154 746912 1 C T - ReadM SNP 0041.scaffold00154 746958 1 A G - ReadM SNP 0041.scaffold00154 746966 1 G A - ReadM SNP 0041.scaffold00154 747026 1 C T - ReadM SNP 0041.scaffold00154 747051 1 C T - ReadM SNP 0041.scaffold00154 747070 1 C G - ReadM SNP 0041.scaffold00154 747119 1 A G - ReadM SNP 0041.scaffold00154 747244 1 A C - ReadM SNP 0041.scaffold00154 747619 1 G T - ReadM SNP 0041.scaffold00154 747657 1 T C - ReadM SNP 0041.scaffold00154 747732 1 A G - ReadM SNP 0041.scaffold00154 747807 1 G A - ReadM SNP 0041.scaffold00154 747811 1 T A - ReadM SNP 0041.scaffold00154 748099 1 G T - ReadM SNP 0041.scaffold00154 748235 1 G T - Both SNP 0041.scaffold00154 748758 1 A T scaffold5395 Both SNP 0041.scaffold00154 748785 1 C T scaffold5395 ReadM SNP 0041.scaffold00154 749077 1 A G - ReadM SNP 0041.scaffold00154 749681 1 T C - ReadM SNP 0041.scaffold00154 749743 1 T C - ReadM INDEL 0041.scaffold00154 749797 2 TT .. - ReadM SNP 0041.scaffold00154 749944 1 A G - ReadM SNP 0041.scaffold00154 749997 1 A G - Both SNP 0041.scaffold00154 750100 1 A C scaffold5395 Both SNP 0041.scaffold00154 750145 1 A T scaffold5395 Both SNP 0041.scaffold00154 750463 1 C T scaffold5395 Both SNP 0041.scaffold00154 750471 1 G A scaffold5395 Both SNP 0041.scaffold00154 750609 1 A C scaffold5395 Both SNP 0041.scaffold00154 750636 1 G T scaffold5395 Both SNP 0041.scaffold00154 750704 1 G A scaffold5395 Both SNP 0041.scaffold00154 750722 1 T C scaffold5395 Both SNP 0041.scaffold00154 750793 1 A G scaffold5395 Both SNP 0041.scaffold00154 750814 1 A G scaffold5395 ScafM INDEL 0041.scaffold00154 750904 30 ATAAGGATGAGCCTTATTCCATTCAAAGTG .............................. scaffold5395 Both INDEL 0041.scaffold00154 751002 1 T . scaffold5395 Both SNP 0041.scaffold00154 751025 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 751097 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 751132 2 GG AA scaffold5395 Both SNP 0041.scaffold00154 751149 1 G A scaffold5395 Both SNP 0041.scaffold00154 751218 1 G A scaffold5395 Both SNP 0041.scaffold00154 751324 1 T C scaffold5395 Both SNP 0041.scaffold00154 751366 1 A G scaffold5395 Both SNP 0041.scaffold00154 751387 1 A T scaffold5395 Both SNP 0041.scaffold00154 751445 1 C T scaffold5395 ScafM SNP 0041.scaffold00154 751536 1 A G scaffold5395 Both SNP 0041.scaffold00154 751726 1 T C scaffold5395 Both SNP 0041.scaffold00154 751838 1 A G scaffold5395 ScafM SNP 0041.scaffold00154 752042 1 T C scaffold5395 Both SNP 0041.scaffold00154 752053 1 C T scaffold5395 Both SNP 0041.scaffold00154 752164 1 C T scaffold5395 ScafM SNP 0041.scaffold00154 752609 1 G C scaffold5395 Both SNP 0041.scaffold00154 752680 1 T A scaffold5395 Both SNP 0041.scaffold00154 752787 1 C A scaffold5395 Both SNP 0041.scaffold00154 752843 1 G T scaffold5395 Both SNP 0041.scaffold00154 752927 1 C A scaffold5395 Both SNP 0041.scaffold00154 752996 1 A G scaffold5395 Both SNP 0041.scaffold00154 753032 1 C T scaffold5395 Both SNP 0041.scaffold00154 753323 1 G A scaffold5395 Both SNP 0041.scaffold00154 753326 1 C T scaffold5395 Both SNP 0041.scaffold00154 753355 1 C A scaffold5395 Both SNP 0041.scaffold00154 753413 1 G A scaffold5395 ReadM SNP 0041.scaffold00154 753435 1 C G - ReadM SNP 0041.scaffold00154 753448 1 C G - Both SNP 0041.scaffold00154 753697 1 T C scaffold5395 Both SNP 0041.scaffold00154 753799 1 T A scaffold5395 Both SNP 0041.scaffold00154 753825 1 G T scaffold5395 Both SNP 0041.scaffold00154 753837 1 T C scaffold5395 ScafM SNP 0041.scaffold00154 753883 1 G C scaffold5395 Both SNP 0041.scaffold00154 753945 1 C T scaffold5395 ScafM INDEL 0041.scaffold00154 754066 1 C . scaffold5395 ScafM INDEL 0041.scaffold00154 754119 13 ............. CTTTTATGGTAAA scaffold5395 ScafM INDEL 0041.scaffold00154 754135 1 . A scaffold5395 Both SNP 0041.scaffold00154 754230 1 T G scaffold5395 Both INDEL 0041.scaffold00154 754252 1 . T scaffold5395 ScafM SNP 0041.scaffold00154 754288 1 A T scaffold5395 Both SNP 0041.scaffold00154 754320 1 G A scaffold5395 Both SNP 0041.scaffold00154 754364 1 C G scaffold5395 ReadM SNP 0041.scaffold00154 754470 1 T A - ReadM SNP 0041.scaffold00154 754824 1 G A - ReadM SNP 0041.scaffold00154 754866 1 C A - Both SNP 0041.scaffold00154 755380 1 G A scaffold5395 ReadM SNP 0041.scaffold00154 755434 1 G T - ReadM SNP 0041.scaffold00154 755465 1 T C - ReadM SNP 0041.scaffold00154 755479 1 A G - ReadM SNP 0041.scaffold00154 755647 1 T C - ReadM SNP 0041.scaffold00154 756246 1 A C - ReadM SNP 0041.scaffold00154 756311 1 A T - ReadM SNP 0041.scaffold00154 756363 1 T G - ReadM SNP 0041.scaffold00154 756448 1 G C - ReadM SNP 0041.scaffold00154 756453 1 C T - ReadM SNP 0041.scaffold00154 756513 1 T A - ReadM SNP 0041.scaffold00154 756592 1 G A - Both SNP 0041.scaffold00154 756652 1 A G scaffold5395 Both SNP 0041.scaffold00154 756691 1 G C scaffold5395 ReadM SNP 0041.scaffold00154 756782 1 G A - ReadM SNP 0041.scaffold00154 756945 1 A G - ReadM SNP 0041.scaffold00154 757006 1 T C - ReadM INDEL 0041.scaffold00154 757065 1 . C - ReadM INDEL 0041.scaffold00154 757167 1 C . - ReadM SNP 0041.scaffold00154 757231 1 T G - ReadM SNP 0041.scaffold00154 757430 1 C T - ReadM SNP 0041.scaffold00154 757486 1 T G - ReadM SNP 0041.scaffold00154 757626 1 G A - ReadM SNP 0041.scaffold00154 757731 1 T G - ReadM SNP 0041.scaffold00154 757795 1 T C - ReadM SNP 0041.scaffold00154 757800 1 T C - ReadM SNP 0041.scaffold00154 757919 1 G T - ScafM SNP 0041.scaffold00154 758217 1 A T scaffold5395 ScafM INDEL 0041.scaffold00154 758222 11 ATTTTAAACGC ........... scaffold5395 ScafM SNP 0041.scaffold00154 758253 1 G T scaffold5395 ReadM SNP 0041.scaffold00154 758380 1 G A - Both SNP 0041.scaffold00154 758392 1 T C scaffold5395 Both SNP 0041.scaffold00154 758431 1 G A scaffold5395 Both INDEL 0041.scaffold00154 758519 2 .. CA scaffold5395 Both SNP 0041.scaffold00154 758551 1 T G scaffold5395 Both INDEL 0041.scaffold00154 758740 1 T . scaffold5395 Both SNP 0041.scaffold00154 758761 1 A C scaffold5395 Both SNP 0041.scaffold00154 758781 1 C T scaffold5395 ReadM SNP 0041.scaffold00154 759044 1 C T - ReadM SNP 0041.scaffold00154 759745 1 A G - ReadM SNP 0041.scaffold00154 759806 1 A T - ReadM SNP 0041.scaffold00154 759833 1 A C - ReadM INDEL 0041.scaffold00154 759979 1 G . - ReadM SNP 0041.scaffold00154 760056 1 A T - Both SNP 0041.scaffold00154 760133 1 A G scaffold5395 Both SNP 0041.scaffold00154 760143 1 G T scaffold5395 Both SNP 0041.scaffold00154 760520 1 C T scaffold5395 ScafM SNP 0041.scaffold00154 790401 1 C T scaffold24416 ScafM SNP 0041.scaffold00154 790480 1 T G scaffold24416 ScafM SNP 0041.scaffold00154 790553 2 TA CC scaffold24416 ScafM INDEL 0041.scaffold00154 790603 2 .T AA scaffold24416 ScafM SNP 0041.scaffold00154 790612 1 T G scaffold24416 ScafM SNP 0041.scaffold00154 790715 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 790750 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 790752 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 790765 1 G A scaffold24416 ScafM INDEL 0041.scaffold00154 790801 14 GTAATGCCACGTCA .............. scaffold24416 ScafM INDEL 0041.scaffold00154 790816 2 CG .. scaffold24416 ScafM SNP 0041.scaffold00154 790831 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 790851 1 T C scaffold24416 ScafM INDEL 0041.scaffold00154 790861 3 ... TTA scaffold24416 Both SNP 0041.scaffold00154 790892 1 T C scaffold24416 Both SNP 0041.scaffold00154 791172 1 T G scaffold24416 ReadM SNP 0041.scaffold00154 791658 1 C A - Both SNP 0041.scaffold00154 791749 1 A G scaffold24416 Both SNP 0041.scaffold00154 791758 1 G C scaffold24416 ScafM SNP 0041.scaffold00154 792003 1 G C scaffold24416 ScafM SNP 0041.scaffold00154 792005 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 792008 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 792014 1 A G scaffold24416 Both SNP 0041.scaffold00154 792088 1 A T scaffold24416 Both SNP 0041.scaffold00154 792166 1 G C scaffold24416 Both SNP 0041.scaffold00154 792236 1 A G scaffold24416 Both SNP 0041.scaffold00154 792298 1 T G scaffold24416 ReadM INDEL 0041.scaffold00154 792366 1 A . - ReadM SNP 0041.scaffold00154 792430 1 G A - ReadM SNP 0041.scaffold00154 792435 1 T G - ScafM SNP 0041.scaffold00154 792571 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 792586 1 G T scaffold24416 ScafM SNP 0041.scaffold00154 792629 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 792650 1 A C scaffold24416 ScafM INDEL 0041.scaffold00154 792679 30 TTCCTTTCAAAAAAAAAAATATGTTGCATA .............................. scaffold24416 ReadM SNP 0041.scaffold00154 794310 1 G A - ReadM SNP 0041.scaffold00154 794314 1 A G - ReadM SNP 0041.scaffold00154 794420 1 G A - ReadM SNP 0041.scaffold00154 794447 1 T G - ScafM SNP 0041.scaffold00154 794619 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 794655 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 794677 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 794708 1 C A scaffold24416 ScafM SNP 0041.scaffold00154 794753 1 G A scaffold24416 ReadM SNP 0041.scaffold00154 797978 1 A T - ScafM SNP 0041.scaffold00154 798194 1 G C scaffold24416 ReadM SNP 0041.scaffold00154 798432 1 T C - ReadM SNP 0041.scaffold00154 798449 1 T G - ScafM SNP 0041.scaffold00154 799717 1 C A scaffold24416 ScafM SNP 0041.scaffold00154 799719 1 G T scaffold24416 ScafM SNP 0041.scaffold00154 799723 1 A T scaffold24416 ScafM INDEL 0041.scaffold00154 799768 4 .... ACTT scaffold24416 ScafM SNP 0041.scaffold00154 799859 1 C G scaffold24416 ReadM SNP 0041.scaffold00154 801400 1 A C - ReadM SNP 0041.scaffold00154 801441 1 T A - ReadM SNP 0041.scaffold00154 801523 1 A T - ReadM SNP 0041.scaffold00154 801537 1 C T - ReadM SNP 0041.scaffold00154 801625 1 C G - ScafM SNP 0041.scaffold00154 801984 2 TT GG scaffold24416 ScafM SNP 0041.scaffold00154 802284 1 A G scaffold24416 ScafM INDEL 0041.scaffold00154 802286 6 ...... GTTTAA scaffold24416 ScafM SNP 0041.scaffold00154 802302 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 802314 1 C T scaffold24416 ScafM SNP 0041.scaffold00154 802381 1 T C scaffold24416 ReadM SNP 0041.scaffold00154 802414 1 A G - ReadM SNP 0041.scaffold00154 802422 1 G A - ReadM INDEL 0041.scaffold00154 802485 1 . G - ScafM SNP 0041.scaffold00154 802590 1 A G scaffold24416 ScafM INDEL 0041.scaffold00154 802637 2 .. AT scaffold24416 ScafM SNP 0041.scaffold00154 802638 1 G T scaffold24416 ScafM SNP 0041.scaffold00154 802756 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 802759 1 C T scaffold24416 ScafM SNP 0041.scaffold00154 802763 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 802789 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 802832 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 802836 1 C G scaffold24416 ScafM INDEL 0041.scaffold00154 802869 1 T . scaffold24416 ScafM SNP 0041.scaffold00154 802902 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 802961 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 803325 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 803346 1 C T scaffold24416 ScafM SNP 0041.scaffold00154 803397 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 803406 1 G A scaffold24416 ScafM INDEL 0041.scaffold00154 803414 1 G . scaffold24416 ScafM SNP 0041.scaffold00154 803416 1 C A scaffold24416 ScafM SNP 0041.scaffold00154 803504 1 A T scaffold24416 ScafM SNP 0041.scaffold00154 803523 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 803526 2 AA CT scaffold24416 ScafM INDEL 0041.scaffold00154 803546 7 AAAATCA ....... scaffold24416 ScafM INDEL 0041.scaffold00154 803556 1 T . scaffold24416 ScafM INDEL 0041.scaffold00154 803558 1 G . scaffold24416 ScafM INDEL 0041.scaffold00154 803591 1 T . scaffold24416 ScafM INDEL 0041.scaffold00154 803601 3 TAT ... scaffold24416 ScafM INDEL 0041.scaffold00154 803617 2 TT .. scaffold24416 ScafM SNP 0041.scaffold00154 803634 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 803692 1 C G scaffold24416 ScafM SNP 0041.scaffold00154 803718 2 CA TG scaffold24416 ScafM SNP 0041.scaffold00154 803733 1 C T scaffold24416 ScafM INDEL 0041.scaffold00154 804093 1 . A scaffold24416 ScafM SNP 0041.scaffold00154 804095 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 804107 1 T G scaffold24416 ScafM SNP 0041.scaffold00154 804149 1 A G scaffold24416 ScafM INDEL 0041.scaffold00154 804177 1 C . scaffold24416 ScafM SNP 0041.scaffold00154 804186 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 804193 1 T C scaffold24416 ScafM SNP 0041.scaffold00154 804195 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 804201 1 G A scaffold24416 ScafM SNP 0041.scaffold00154 804225 1 A C scaffold24416 ScafM SNP 0041.scaffold00154 804249 1 T C scaffold24416 ScafM INDEL 0041.scaffold00154 804256 4 CCCG .... scaffold24416 ScafM INDEL 0041.scaffold00154 804268 1 C . scaffold24416 ScafM SNP 0041.scaffold00154 804288 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 804295 1 G T scaffold24416 ScafM SNP 0041.scaffold00154 804314 1 T C scaffold24416 ScafM INDEL 0041.scaffold00154 804342 8 TTCAAAAT ........ scaffold24416 ScafM INDEL 0041.scaffold00154 804351 7 TATGAGG ....... scaffold24416 ScafM SNP 0041.scaffold00154 804370 1 A G scaffold24416 ScafM SNP 0041.scaffold00154 804502 1 G T scaffold24416 ScafM INDEL 0041.scaffold00154 804625 33 ................................. TCCCCTCAAAAAAAAAAGTATAGAAGTATTATA scaffold24416 ScafM INDEL 0041.scaffold00154 804684 2 .. AT scaffold24416 ScafM INDEL 0041.scaffold00154 804686 1 . A scaffold24416 ScafM SNP 0041.scaffold00154 804737 1 G C scaffold24416 ScafM SNP 0041.scaffold00154 804887 1 C A scaffold3485 ScafM SNP 0041.scaffold00154 804899 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 804918 1 G C scaffold3485 ScafM SNP 0041.scaffold00154 804926 1 A G scaffold3485 ScafM SNP 0041.scaffold00154 804988 1 A G scaffold3485 ScafM SNP 0041.scaffold00154 805029 1 A G scaffold3485 ScafM INDEL 0041.scaffold00154 805121 8 TTATGTTG ........ scaffold3485 ScafM SNP 0041.scaffold00154 805160 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 805181 1 T C scaffold3485 ReadM SNP 0041.scaffold00154 805512 2 CC AT - ReadM SNP 0041.scaffold00154 805696 1 T A - ReadM SNP 0041.scaffold00154 805700 1 T C - ReadM SNP 0041.scaffold00154 805748 1 T A - ReadM SNP 0041.scaffold00154 805800 1 C T - ReadM SNP 0041.scaffold00154 805845 1 T C - ReadM SNP 0041.scaffold00154 805938 1 C G - ReadM SNP 0041.scaffold00154 805959 1 G A - ReadM SNP 0041.scaffold00154 806015 1 A G - ReadM SNP 0041.scaffold00154 806028 1 C T - ReadM SNP 0041.scaffold00154 806062 1 G A - ReadM SNP 0041.scaffold00154 806128 1 T C - ReadM SNP 0041.scaffold00154 806131 1 G A - ReadM SNP 0041.scaffold00154 806178 1 A G - ReadM SNP 0041.scaffold00154 806361 1 C T - ReadM SNP 0041.scaffold00154 806468 1 A G - ReadM SNP 0041.scaffold00154 806472 1 G A - ReadM SNP 0041.scaffold00154 806516 1 C G - ReadM SNP 0041.scaffold00154 806563 1 C T - ReadM SNP 0041.scaffold00154 806571 1 C A - ScafM SNP 0041.scaffold00154 807309 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807324 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807356 1 G A scaffold3485 ScafM INDEL 0041.scaffold00154 807384 3 ... AAA scaffold3485 ScafM SNP 0041.scaffold00154 807386 1 T A scaffold3485 ScafM SNP 0041.scaffold00154 807391 1 T C scaffold3485 ScafM SNP 0041.scaffold00154 807444 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807454 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807473 1 C T scaffold3485 ScafM INDEL 0041.scaffold00154 807515 2 .. GA scaffold3485 ScafM SNP 0041.scaffold00154 807725 1 T C scaffold3485 ScafM SNP 0041.scaffold00154 807733 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807759 1 C G scaffold3485 ScafM SNP 0041.scaffold00154 807832 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807859 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807874 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807914 1 T C scaffold3485 ScafM SNP 0041.scaffold00154 807918 1 T C scaffold3485 ScafM SNP 0041.scaffold00154 807924 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807944 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807957 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807961 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807963 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 807965 1 C T scaffold3485 ScafM SNP 0041.scaffold00154 807983 1 G A scaffold3485 ScafM SNP 0041.scaffold00154 808000 1 A G scaffold3485 ScafM SNP 0041.scaffold00154 808012 1 A G scaffold3485 Both SNP 0041.scaffold00154 808040 1 T C scaffold3485 Both SNP 0041.scaffold00154 808051 1 T C scaffold3485 Both SNP 0041.scaffold00154 808130 1 C T scaffold3485 Both SNP 0041.scaffold00154 808166 1 A T scaffold3485 Both SNP 0041.scaffold00154 808207 1 C G scaffold3485 ReadM SNP 0041.scaffold00154 808229 1 T G - ReadM SNP 0041.scaffold00154 808251 1 G T - ReadM SNP 0041.scaffold00154 808553 1 C T - ReadM SNP 0041.scaffold00154 808579 1 A C - ReadM SNP 0041.scaffold00154 808642 1 T A - ReadM SNP 0041.scaffold00154 808728 1 T G - ReadM SNP 0041.scaffold00154 810232 1 A C - ReadM SNP 0041.scaffold00154 810314 1 G C - ReadM SNP 0041.scaffold00154 810366 1 T C - ReadM SNP 0041.scaffold00154 810371 1 G A - ReadM SNP 0041.scaffold00154 810470 1 T C - ReadM SNP 0041.scaffold00154 810548 1 A C - ReadM SNP 0041.scaffold00154 810607 1 T G - ReadM SNP 0041.scaffold00154 811130 1 T C - ReadM SNP 0041.scaffold00154 811149 1 G A - ReadM SNP 0041.scaffold00154 811222 1 A G - ScafM SNP 0041.scaffold00154 811738 1 T C scaffold18789 ScafM SNP 0041.scaffold00154 811797 1 T C scaffold18789 ScafM SNP 0041.scaffold00154 811799 1 T A scaffold18789 ReadM SNP 0041.scaffold00154 812297 1 A T - ReadM SNP 0041.scaffold00154 812373 1 C A - ReadM SNP 0041.scaffold00154 812380 1 G T - ReadM INDEL 0041.scaffold00154 812400 1 A . - ReadM SNP 0041.scaffold00154 813213 1 T C - ReadM SNP 0041.scaffold00154 813259 1 G T - ReadM SNP 0041.scaffold00154 813266 1 G T - ReadM SNP 0041.scaffold00154 813328 1 A T - ReadM SNP 0041.scaffold00154 813349 1 C T - Both SNP 0041.scaffold00154 813565 1 G A scaffold18789 ScafM SNP 0041.scaffold00154 813636 1 A G scaffold18789 ScafM INDEL 0041.scaffold00154 813658 1 . C scaffold18789 ScafM SNP 0041.scaffold00154 813677 1 A G scaffold18789 ScafM SNP 0041.scaffold00154 813724 1 T G scaffold18789 ScafM SNP 0041.scaffold00154 813777 2 CT AA scaffold18789 ScafM SNP 0041.scaffold00154 813780 1 C A scaffold18789 ScafM SNP 0041.scaffold00154 813798 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 813805 1 G A scaffold18789 ScafM SNP 0041.scaffold00154 813822 1 T C scaffold18789 ScafM INDEL 0041.scaffold00154 813825 1 . G scaffold18789 ReadM SNP 0041.scaffold00154 814099 1 G T - ReadM SNP 0041.scaffold00154 814126 1 C T - ReadM SNP 0041.scaffold00154 814128 1 C G - ReadM SNP 0041.scaffold00154 814208 1 G A - ReadM SNP 0041.scaffold00154 814235 1 A G - ReadM SNP 0041.scaffold00154 814288 1 C T - ReadM SNP 0041.scaffold00154 814318 1 C T - ReadM SNP 0041.scaffold00154 814337 1 C G - ReadM SNP 0041.scaffold00154 814425 1 A C - ReadM INDEL 0041.scaffold00154 814445 1 . G - ReadM SNP 0041.scaffold00154 814526 1 G C - ReadM SNP 0041.scaffold00154 814556 1 A G - ReadM SNP 0041.scaffold00154 814625 1 C T - ReadM SNP 0041.scaffold00154 814736 1 T G - ReadM SNP 0041.scaffold00154 814812 1 T C - ReadM SNP 0041.scaffold00154 814835 1 G C - ScafM SNP 0041.scaffold00154 814915 1 C G scaffold18789 Both SNP 0041.scaffold00154 814986 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 815013 2 GC AG scaffold18789 Both SNP 0041.scaffold00154 815081 1 A G scaffold18789 Both SNP 0041.scaffold00154 815114 1 G A scaffold18789 Both SNP 0041.scaffold00154 815199 1 G A scaffold18789 Both SNP 0041.scaffold00154 815205 1 T A scaffold18789 Both SNP 0041.scaffold00154 815256 1 G A scaffold18789 Both SNP 0041.scaffold00154 815345 1 A G scaffold18789 Both SNP 0041.scaffold00154 815401 1 T C scaffold18789 Both SNP 0041.scaffold00154 815435 1 C T scaffold18789 Both SNP 0041.scaffold00154 815465 1 C T scaffold18789 Both SNP 0041.scaffold00154 815481 1 T A scaffold18789 ScafM SNP 0041.scaffold00154 815537 1 A C scaffold18789 ScafM SNP 0041.scaffold00154 815577 1 A G scaffold18789 ScafM SNP 0041.scaffold00154 815599 1 T C scaffold18789 ScafM SNP 0041.scaffold00154 815611 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 815659 2 CG AT scaffold18789 Both SNP 0041.scaffold00154 815697 1 T C scaffold18789 Both SNP 0041.scaffold00154 815744 1 G A scaffold18789 Both SNP 0041.scaffold00154 815782 1 T A scaffold18789 Both SNP 0041.scaffold00154 815819 1 T C scaffold18789 Both SNP 0041.scaffold00154 815837 1 A C scaffold18789 ScafM SNP 0041.scaffold00154 815880 1 G T scaffold18789 ScafM SNP 0041.scaffold00154 815905 1 A G scaffold18789 ScafM SNP 0041.scaffold00154 815911 1 C A scaffold18789 ScafM SNP 0041.scaffold00154 815924 1 T C scaffold18789 ScafM SNP 0041.scaffold00154 815926 1 C T scaffold18789 ScafM INDEL 0041.scaffold00154 815958 3 TTA ... scaffold18789 ScafM SNP 0041.scaffold00154 816044 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 816059 1 G A scaffold18789 ScafM SNP 0041.scaffold00154 816067 2 CT AC scaffold18789 ScafM SNP 0041.scaffold00154 816075 1 T A scaffold18789 ScafM SNP 0041.scaffold00154 816077 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 816080 1 C T scaffold18789 Both SNP 0041.scaffold00154 816170 1 T A scaffold18789 ReadM SNP 0041.scaffold00154 816231 1 A G - ReadM SNP 0041.scaffold00154 816535 1 A T - ReadM SNP 0041.scaffold00154 816541 1 C T - ReadM SNP 0041.scaffold00154 816610 1 C T - ReadM SNP 0041.scaffold00154 817030 1 G A - ReadM SNP 0041.scaffold00154 817034 1 G A - ReadM SNP 0041.scaffold00154 817141 1 C A - ReadM SNP 0041.scaffold00154 817763 1 T C - ReadM SNP 0041.scaffold00154 817782 1 G A - ReadM SNP 0041.scaffold00154 817831 1 G T - ReadM SNP 0041.scaffold00154 817922 1 G A - ReadM SNP 0041.scaffold00154 817939 1 A G - ScafM SNP 0041.scaffold00154 817992 1 G A scaffold18789 ScafM SNP 0041.scaffold00154 817999 1 A G scaffold18789 ScafM SNP 0041.scaffold00154 818001 2 TG CA scaffold18789 ScafM SNP 0041.scaffold00154 818006 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 818018 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 818020 1 G C scaffold18789 ScafM SNP 0041.scaffold00154 818042 1 C T scaffold18789 ScafM SNP 0041.scaffold00154 818044 1 G T scaffold18789 ReadM SNP 0041.scaffold00154 818191 1 A G - Both SNP 0041.scaffold00154 818233 1 A G scaffold18789 Both SNP 0041.scaffold00154 818309 1 C T scaffold18789 ScafM INDEL 0041.scaffold00154 818325 1 . T scaffold18789 Both SNP 0041.scaffold00154 818374 1 A G scaffold18789 ScafM SNP 0041.scaffold00154 818403 1 G C scaffold18789 ScafM SNP 0041.scaffold00154 818414 1 G A scaffold18789 ScafM SNP 0041.scaffold00154 818431 1 C A scaffold18789 ScafM INDEL 0041.scaffold00154 818446 1 A . scaffold18789 ScafM SNP 0041.scaffold00154 818455 2 CC AT scaffold18789 ReadM SNP 0041.scaffold00154 818612 1 C A - ReadM SNP 0041.scaffold00154 818630 1 T C - ReadM SNP 0041.scaffold00154 818730 1 T G - ReadM SNP 0041.scaffold00154 818739 1 C T - ReadM SNP 0041.scaffold00154 818805 1 G A - ReadM SNP 0041.scaffold00154 835019 1 A G - ReadM SNP 0041.scaffold00154 835064 1 C G - ReadM SNP 0041.scaffold00154 835076 1 A T - ReadM SNP 0041.scaffold00154 835112 1 G A - ReadM SNP 0041.scaffold00154 835146 1 G A - ReadM SNP 0041.scaffold00154 835503 1 T G - ReadM SNP 0041.scaffold00154 835535 1 T G - ReadM SNP 0041.scaffold00154 835599 1 G A - ReadM SNP 0041.scaffold00154 835602 1 G A - ReadM SNP 0041.scaffold00154 835691 1 G T - ReadM SNP 0041.scaffold00154 835750 1 G A - ReadM SNP 0041.scaffold00154 835855 1 T C - ReadM SNP 0041.scaffold00154 835885 1 G A - Both SNP 0041.scaffold00154 835973 1 A G scaffold21526 Both SNP 0041.scaffold00154 835976 1 T C scaffold21526 Both SNP 0041.scaffold00154 836022 1 A T scaffold21526 ScafM SNP 0041.scaffold00154 836066 2 TT CC scaffold21526 Both SNP 0041.scaffold00154 836103 1 G A scaffold21526 Both SNP 0041.scaffold00154 836174 1 G T scaffold21526 ScafM SNP 0041.scaffold00154 836196 1 A T scaffold21526 ScafM SNP 0041.scaffold00154 836229 2 TG CA scaffold21526 ScafM INDEL 0041.scaffold00154 836277 2 TA .. scaffold21526 Both SNP 0041.scaffold00154 836316 1 T C scaffold21526 Both SNP 0041.scaffold00154 836339 1 T G scaffold21526 Both SNP 0041.scaffold00154 836385 1 A C scaffold21526 ScafM SNP 0041.scaffold00154 836394 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 836421 2 GG TA scaffold21526 ScafM SNP 0041.scaffold00154 836468 1 A G scaffold21526 Both SNP 0041.scaffold00154 836566 1 G A scaffold21526 Both SNP 0041.scaffold00154 836606 1 A G scaffold21526 Both SNP 0041.scaffold00154 836695 1 A G scaffold21526 Both SNP 0041.scaffold00154 836701 1 G A scaffold21526 ScafM SNP 0041.scaffold00154 836746 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 836748 1 A G scaffold21526 ScafM INDEL 0041.scaffold00154 836774 12 ............ GGTGATGATATT scaffold21526 ScafM SNP 0041.scaffold00154 836777 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 836782 1 C T scaffold21526 Both SNP 0041.scaffold00154 836830 1 A G scaffold21526 ScafM SNP 0041.scaffold00154 836920 2 GT AC scaffold21526 Both SNP 0041.scaffold00154 836963 1 G A scaffold21526 Both SNP 0041.scaffold00154 836973 1 T C scaffold21526 Both SNP 0041.scaffold00154 836986 1 A T scaffold21526 Both SNP 0041.scaffold00154 837069 1 A G scaffold21526 Both SNP 0041.scaffold00154 837129 1 A G scaffold21526 Both SNP 0041.scaffold00154 837210 1 A C scaffold21526 Both SNP 0041.scaffold00154 837275 1 C T scaffold21526 Both SNP 0041.scaffold00154 837388 1 A T scaffold21526 Both SNP 0041.scaffold00154 837444 1 G T scaffold21526 Both SNP 0041.scaffold00154 837523 1 G T scaffold21526 Both SNP 0041.scaffold00154 837539 1 T C scaffold21526 Both INDEL 0041.scaffold00154 837550 1 . A scaffold21526 ScafM SNP 0041.scaffold00154 837601 1 T A scaffold21526 ScafM SNP 0041.scaffold00154 837613 1 T G scaffold21526 ScafM SNP 0041.scaffold00154 837635 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 837643 2 GT CC scaffold21526 ScafM SNP 0041.scaffold00154 837661 2 GA AG scaffold21526 Both SNP 0041.scaffold00154 837724 1 G A scaffold21526 Both SNP 0041.scaffold00154 837767 1 A C scaffold21526 ScafM SNP 0041.scaffold00154 837775 2 CA TG scaffold21526 Both SNP 0041.scaffold00154 837867 1 G T scaffold21526 Both SNP 0041.scaffold00154 837897 1 T C scaffold21526 Both SNP 0041.scaffold00154 837984 1 A G scaffold21526 Both SNP 0041.scaffold00154 838041 1 C T scaffold21526 Both SNP 0041.scaffold00154 838081 1 G A scaffold21526 ScafM INDEL 0041.scaffold00154 838140 3 ... TTG scaffold21526 ScafM INDEL 0041.scaffold00154 838146 10 .......... TATCTGCATA scaffold21526 ScafM INDEL 0041.scaffold00154 838162 1 . T scaffold21526 ScafM SNP 0041.scaffold00154 838164 1 A T scaffold21526 ScafM SNP 0041.scaffold00154 838171 1 C T scaffold21526 ScafM INDEL 0041.scaffold00154 838181 4 GGTC .... scaffold21526 ScafM INDEL 0041.scaffold00154 838186 1 G . scaffold21526 ScafM INDEL 0041.scaffold00154 838190 4 CGGG .... scaffold21526 ScafM SNP 0041.scaffold00154 838195 1 C A scaffold21526 ScafM SNP 0041.scaffold00154 838218 1 A G scaffold21526 ScafM SNP 0041.scaffold00154 838227 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 838242 1 G A scaffold21526 ScafM SNP 0041.scaffold00154 838251 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 838257 1 A G scaffold21526 ScafM SNP 0041.scaffold00154 838266 1 G A scaffold21526 ScafM SNP 0041.scaffold00154 838277 2 CC TT scaffold21526 ScafM SNP 0041.scaffold00154 838280 1 A G scaffold21526 Both SNP 0041.scaffold00154 838372 1 G A scaffold21526 Both INDEL 0041.scaffold00154 838451 1 G . scaffold21526 Both SNP 0041.scaffold00154 838814 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 838818 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 838829 1 A G scaffold21526 ScafM SNP 0041.scaffold00154 838867 1 G T scaffold21526 ScafM INDEL 0041.scaffold00154 838900 3 ... TTC scaffold21526 Both SNP 0041.scaffold00154 839000 1 A G scaffold21526 Both SNP 0041.scaffold00154 839061 1 T G scaffold21526 Both SNP 0041.scaffold00154 839207 1 T C scaffold21526 Both SNP 0041.scaffold00154 839383 1 A C scaffold21526 Both SNP 0041.scaffold00154 839557 1 C T scaffold21526 Both SNP 0041.scaffold00154 839584 1 G A scaffold21526 Both SNP 0041.scaffold00154 839761 1 G T scaffold21526 Both SNP 0041.scaffold00154 839839 1 T C scaffold21526 Both SNP 0041.scaffold00154 840423 1 G T scaffold21526 Both SNP 0041.scaffold00154 840628 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 841020 1 C T scaffold21526 Both SNP 0041.scaffold00154 841057 1 G A scaffold21526 Both SNP 0041.scaffold00154 841071 1 T C scaffold21526 Both SNP 0041.scaffold00154 841357 1 G A scaffold21526 ReadM SNP 0041.scaffold00154 841505 1 G A - ReadM SNP 0041.scaffold00154 841514 1 C T - ReadM SNP 0041.scaffold00154 841548 1 T C - ReadM SNP 0041.scaffold00154 841588 1 C T - Both SNP 0041.scaffold00154 841680 1 T G scaffold21526 Both SNP 0041.scaffold00154 841852 1 G C scaffold21526 Both SNP 0041.scaffold00154 841985 1 G T scaffold21526 Both SNP 0041.scaffold00154 842532 1 C T scaffold21526 Both SNP 0041.scaffold00154 842572 1 T C scaffold21526 ScafM INDEL 0041.scaffold00154 842597 5 TTAAA ..... scaffold21526 ScafM SNP 0041.scaffold00154 842603 1 T C scaffold21526 Both SNP 0041.scaffold00154 843286 1 C G scaffold21526 Both INDEL 0041.scaffold00154 843508 2 TT .. scaffold21526 Both SNP 0041.scaffold00154 843683 1 T C scaffold21526 Both SNP 0041.scaffold00154 843776 1 C A scaffold21526 Both SNP 0041.scaffold00154 844097 1 T C scaffold21526 ReadM INDEL 0041.scaffold00154 844169 2 CT .. - Both INDEL 0041.scaffold00154 844172 3 CCT ... scaffold21526 Both SNP 0041.scaffold00154 844309 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 844321 1 T A scaffold21526 Both SNP 0041.scaffold00154 844363 1 G A scaffold21526 Both SNP 0041.scaffold00154 844392 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 844435 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 844443 1 G T scaffold21526 ScafM INDEL 0041.scaffold00154 844447 10 TTGTTGGGTT .......... scaffold21526 ScafM SNP 0041.scaffold00154 844487 1 G A scaffold21526 ScafM INDEL 0041.scaffold00154 844497 1 A . scaffold21526 ScafM INDEL 0041.scaffold00154 844508 1 A . scaffold21526 ScafM SNP 0041.scaffold00154 844567 1 G A scaffold21526 ReadM SNP 0041.scaffold00154 844649 1 C T - ReadM SNP 0041.scaffold00154 844680 1 T C - ReadM SNP 0041.scaffold00154 844697 1 C T - ReadM SNP 0041.scaffold00154 844772 1 A G - ReadM SNP 0041.scaffold00154 844782 1 T C - ReadM SNP 0041.scaffold00154 844818 1 C T - ScafM SNP 0041.scaffold00154 844898 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 844908 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 844920 1 G A scaffold21526 ScafM SNP 0041.scaffold00154 844931 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 844975 1 G A scaffold21526 ReadM SNP 0041.scaffold00154 845354 1 T G - ReadM SNP 0041.scaffold00154 845359 1 T C - ReadM SNP 0041.scaffold00154 845379 1 A T - ReadM SNP 0041.scaffold00154 845567 1 A G - ScafM SNP 0041.scaffold00154 847685 1 G C scaffold21526 ScafM SNP 0041.scaffold00154 847691 1 T C scaffold21526 ScafM INDEL 0041.scaffold00154 847699 1 A . scaffold21526 ScafM SNP 0041.scaffold00154 847702 1 A C scaffold21526 ScafM SNP 0041.scaffold00154 847824 1 T G scaffold21526 ScafM SNP 0041.scaffold00154 847841 1 C T scaffold21526 Both SNP 0041.scaffold00154 847935 1 G A scaffold21526 ReadM SNP 0041.scaffold00154 848074 1 G A - ReadM SNP 0041.scaffold00154 848105 1 T C - ReadM SNP 0041.scaffold00154 848160 1 C T - ReadM SNP 0041.scaffold00154 848199 1 T C - ReadM SNP 0041.scaffold00154 848236 1 G A - ReadM SNP 0041.scaffold00154 848240 1 A T - ReadM INDEL 0041.scaffold00154 848300 1 . A - ReadM SNP 0041.scaffold00154 848422 1 T C - ReadM SNP 0041.scaffold00154 848511 1 A C - ReadM SNP 0041.scaffold00154 852182 1 T A - ReadM SNP 0041.scaffold00154 858668 1 G A - ReadM SNP 0041.scaffold00154 858716 1 G T - ReadM SNP 0041.scaffold00154 858720 1 G T - ReadM SNP 0041.scaffold00154 858779 1 A G - ReadM SNP 0041.scaffold00154 858842 1 C G - ReadM SNP 0041.scaffold00154 858854 1 A T - ScafM SNP 0041.scaffold00154 870807 1 A G scaffold21526 ReadM SNP 0041.scaffold00154 871107 1 C T - Both SNP 0041.scaffold00154 871246 1 G A scaffold21526 Both SNP 0041.scaffold00154 871292 1 T A scaffold21526 Both SNP 0041.scaffold00154 871322 1 C T scaffold21526 Both SNP 0041.scaffold00154 871393 1 G A scaffold21526 Both SNP 0041.scaffold00154 871482 1 G A scaffold21526 ReadM SNP 0041.scaffold00154 871575 1 G T - ReadM SNP 0041.scaffold00154 871620 1 A T - ReadM SNP 0041.scaffold00154 871795 1 C T - Both SNP 0041.scaffold00154 871937 1 T C scaffold21526 Both SNP 0041.scaffold00154 871985 1 T C scaffold21526 ReadM SNP 0041.scaffold00154 872022 1 G A - ReadM SNP 0041.scaffold00154 872116 1 G C - ReadM SNP 0041.scaffold00154 872169 1 C G - ReadM SNP 0041.scaffold00154 872219 1 T C - ReadM SNP 0041.scaffold00154 872238 1 G A - ReadM SNP 0041.scaffold00154 872358 1 A G - ReadM SNP 0041.scaffold00154 872388 1 C T - ReadM SNP 0041.scaffold00154 872418 1 T C - ReadM SNP 0041.scaffold00154 872457 1 A G - ReadM SNP 0041.scaffold00154 872483 1 A G - ReadM SNP 0041.scaffold00154 872519 1 A T - ReadM SNP 0041.scaffold00154 872568 1 T C - ReadM SNP 0041.scaffold00154 872613 1 T G - Both SNP 0041.scaffold00154 872661 1 G T scaffold21526 Both SNP 0041.scaffold00154 872717 1 C T scaffold21526 Both SNP 0041.scaffold00154 872748 1 T C scaffold21526 Both SNP 0041.scaffold00154 872769 1 T G scaffold21526 Both SNP 0041.scaffold00154 872812 1 G A scaffold21526 Both SNP 0041.scaffold00154 872904 1 C T scaffold21526 ReadM SNP 0041.scaffold00154 872931 1 T C - ReadM SNP 0041.scaffold00154 872940 1 T C - ReadM SNP 0041.scaffold00154 873064 1 A G - ReadM SNP 0041.scaffold00154 873079 1 G A - ScafM SNP 0041.scaffold00154 873207 1 C T scaffold21526 ScafM SNP 0041.scaffold00154 873220 1 A T scaffold21526 ScafM SNP 0041.scaffold00154 873313 1 T G scaffold21526 ScafM SNP 0041.scaffold00154 873388 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 873398 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 873406 1 T C scaffold21526 ScafM SNP 0041.scaffold00154 875483 1 A C scaffold45026 ScafM SNP 0041.scaffold00154 875539 1 A G scaffold45026 ScafM SNP 0041.scaffold00154 875612 1 A G scaffold45026 ScafM INDEL 0041.scaffold00154 875649 1 C . scaffold45026 ScafM INDEL 0041.scaffold00154 875689 1 . T scaffold45026 ReadM SNP 0041.scaffold00154 875818 1 T C - ScafM SNP 0041.scaffold00154 879483 1 G A scaffold4857 ScafM SNP 0041.scaffold00154 879497 2 AA CG scaffold4857 ScafM SNP 0041.scaffold00154 879529 1 G T scaffold4857 ReadM SNP 0041.scaffold00154 879754 1 C G - ReadM SNP 0041.scaffold00154 879816 1 A T - Both INDEL 0041.scaffold00154 880161 1 T . scaffold4857 Both SNP 0041.scaffold00154 880246 1 G C scaffold4857 ReadM INDEL 0041.scaffold00154 880351 1 . G - ReadM SNP 0041.scaffold00154 880434 1 A G - ReadM SNP 0041.scaffold00154 880476 1 A C - ReadM SNP 0041.scaffold00154 880519 1 A G - ReadM SNP 0041.scaffold00154 880544 1 G A - ReadM SNP 0041.scaffold00154 880608 1 C A - ReadM SNP 0041.scaffold00154 880625 1 C T - Both SNP 0041.scaffold00154 880660 1 A G scaffold4857 ReadM SNP 0041.scaffold00154 880767 1 A G - ReadM SNP 0041.scaffold00154 880824 1 G A - ReadM SNP 0041.scaffold00154 880853 1 A G - ReadM SNP 0041.scaffold00154 880867 1 C A - Both SNP 0041.scaffold00154 880944 1 C T scaffold4857 Both SNP 0041.scaffold00154 880999 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 881035 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 881039 1 C T scaffold4857 ReadM SNP 0041.scaffold00154 881241 1 T G - Both SNP 0041.scaffold00154 881291 1 T C scaffold4857 Both SNP 0041.scaffold00154 881319 1 C T scaffold4857 Both SNP 0041.scaffold00154 881406 1 A G scaffold4857 Both SNP 0041.scaffold00154 881514 1 C T scaffold4857 Both SNP 0041.scaffold00154 881553 1 C T scaffold4857 ReadM SNP 0041.scaffold00154 881595 1 A G - ReadM SNP 0041.scaffold00154 881651 1 A T - ReadM SNP 0041.scaffold00154 881730 1 C T - ReadM SNP 0041.scaffold00154 881754 1 C T - ReadM SNP 0041.scaffold00154 881779 1 C T - ReadM SNP 0041.scaffold00154 881818 1 C T - ReadM SNP 0041.scaffold00154 881970 1 T C - ReadM SNP 0041.scaffold00154 881974 1 C T - ReadM SNP 0041.scaffold00154 882087 1 T A - ReadM SNP 0041.scaffold00154 882104 1 G T - ReadM SNP 0041.scaffold00154 882205 1 A G - ReadM SNP 0041.scaffold00154 882209 1 C T - ReadM SNP 0041.scaffold00154 882215 1 A G - ScafM SNP 0041.scaffold00154 882528 1 T A scaffold4857 ScafM SNP 0041.scaffold00154 882547 1 T A scaffold4857 ScafM SNP 0041.scaffold00154 882587 1 G A scaffold4857 ScafM SNP 0041.scaffold00154 882608 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 882656 1 C A scaffold4857 ScafM SNP 0041.scaffold00154 882658 1 A T scaffold4857 ScafM SNP 0041.scaffold00154 882684 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 882692 1 T G scaffold4857 ScafM SNP 0041.scaffold00154 882714 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 882716 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 882771 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 882800 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 882873 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 883008 2 CG TT scaffold4857 ScafM SNP 0041.scaffold00154 883157 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 883167 1 T C scaffold4857 Both SNP 0041.scaffold00154 883195 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 883269 1 C T scaffold4857 ScafM INDEL 0041.scaffold00154 883386 3 GAT ... scaffold4857 ScafM SNP 0041.scaffold00154 883467 1 G A scaffold4857 ScafM INDEL 0041.scaffold00154 883486 2 .. AG scaffold4857 ScafM INDEL 0041.scaffold00154 883487 2 .C AA scaffold4857 ScafM SNP 0041.scaffold00154 883512 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 883752 1 G A scaffold4857 Both INDEL 0041.scaffold00154 883821 1 . A scaffold4857 ScafM SNP 0041.scaffold00154 883945 2 TT GC scaffold4857 Both SNP 0041.scaffold00154 883972 1 G A scaffold4857 Both INDEL 0041.scaffold00154 884032 1 . A scaffold4857 Both SNP 0041.scaffold00154 884130 1 T C scaffold4857 Both SNP 0041.scaffold00154 884143 1 A G scaffold4857 Both SNP 0041.scaffold00154 884302 1 C T scaffold4857 Both SNP 0041.scaffold00154 884323 1 C T scaffold4857 Both SNP 0041.scaffold00154 884357 1 C G scaffold4857 ScafM SNP 0041.scaffold00154 884684 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 884690 1 A C scaffold4857 ScafM INDEL 0041.scaffold00154 896894 4 .... TTCT scaffold4857 ScafM INDEL 0041.scaffold00154 896896 4 .... CATA scaffold4857 ScafM SNP 0041.scaffold00154 897003 1 C T scaffold4857 Both SNP 0041.scaffold00154 897039 1 A C scaffold4857 Both INDEL 0041.scaffold00154 897063 1 . T scaffold4857 Both SNP 0041.scaffold00154 897080 1 T C scaffold4857 Both SNP 0041.scaffold00154 897159 1 A G scaffold4857 Both SNP 0041.scaffold00154 897181 1 A G scaffold4857 ScafM INDEL 0041.scaffold00154 897223 3 TTA ... scaffold4857 ScafM INDEL 0041.scaffold00154 897229 1 . G scaffold4857 ReadM SNP 0041.scaffold00154 897409 1 A T - ReadM SNP 0041.scaffold00154 897411 1 A C - ReadM SNP 0041.scaffold00154 897487 1 G A - ReadM SNP 0041.scaffold00154 897782 1 T C - ReadM SNP 0041.scaffold00154 897817 1 A G - ReadM SNP 0041.scaffold00154 897885 1 T C - ReadM SNP 0041.scaffold00154 898238 1 A T - ReadM SNP 0041.scaffold00154 898252 1 T G - ReadM SNP 0041.scaffold00154 898257 1 A G - ReadM SNP 0041.scaffold00154 899536 1 G A - ReadM SNP 0041.scaffold00154 899540 1 T C - ReadM SNP 0041.scaffold00154 899997 1 T C - ScafM SNP 0041.scaffold00154 900178 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 900221 1 G T scaffold4857 ScafM SNP 0041.scaffold00154 900277 1 G T scaffold4857 ReadM SNP 0041.scaffold00154 902121 1 G C - ReadM SNP 0041.scaffold00154 919313 1 T C - ReadM INDEL 0041.scaffold00154 919524 2 TT .. - ScafM SNP 0041.scaffold00154 920269 2 AG CA scaffold4527 ScafM SNP 0041.scaffold00154 920274 1 T C scaffold4527 ScafM INDEL 0041.scaffold00154 920277 3 TAC ... scaffold4527 ScafM INDEL 0041.scaffold00154 920284 2 .C GT scaffold4527 ScafM INDEL 0041.scaffold00154 920296 1 G . scaffold4527 ReadM SNP 0041.scaffold00154 920303 1 C T - ReadM SNP 0041.scaffold00154 920308 1 A G - ScafM SNP 0041.scaffold00154 920308 2 AT GC scaffold4527 ScafM SNP 0041.scaffold00154 920314 1 A G scaffold4527 ScafM SNP 0041.scaffold00154 920316 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920322 2 GC AT scaffold4527 ScafM SNP 0041.scaffold00154 920327 1 A G scaffold4527 ScafM SNP 0041.scaffold00154 920329 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920334 1 T C scaffold4527 ScafM SNP 0041.scaffold00154 920344 1 C T scaffold4527 ScafM INDEL 0041.scaffold00154 920347 2 CA .T scaffold4527 ScafM SNP 0041.scaffold00154 920354 1 A G scaffold4527 ScafM INDEL 0041.scaffold00154 920359 1 G . scaffold4527 ScafM INDEL 0041.scaffold00154 920363 1 . A scaffold4527 ScafM SNP 0041.scaffold00154 920367 1 A T scaffold4527 ScafM SNP 0041.scaffold00154 920376 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920378 1 A G scaffold4527 ScafM SNP 0041.scaffold00154 920388 1 C A scaffold4527 ScafM SNP 0041.scaffold00154 920393 1 G C scaffold4527 ScafM SNP 0041.scaffold00154 920396 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920400 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920402 1 T C scaffold4527 ScafM SNP 0041.scaffold00154 920409 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920412 1 T C scaffold4527 ScafM SNP 0041.scaffold00154 920422 1 C G scaffold4527 ScafM INDEL 0041.scaffold00154 920424 2 .. AG scaffold4527 ScafM SNP 0041.scaffold00154 920426 1 T C scaffold4527 ScafM SNP 0041.scaffold00154 920432 1 G T scaffold4527 ScafM SNP 0041.scaffold00154 920442 1 T A scaffold4527 ScafM SNP 0041.scaffold00154 920451 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920453 1 G T scaffold4527 ScafM SNP 0041.scaffold00154 920461 1 C G scaffold4527 ScafM SNP 0041.scaffold00154 920507 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920509 2 CC GA scaffold4527 ScafM SNP 0041.scaffold00154 920519 1 T A scaffold4527 ScafM SNP 0041.scaffold00154 920528 1 C T scaffold4527 ScafM INDEL 0041.scaffold00154 920563 1 T . scaffold4527 ReadM SNP 0041.scaffold00154 920565 1 A G - ScafM INDEL 0041.scaffold00154 920566 1 . T scaffold4527 ScafM SNP 0041.scaffold00154 920568 1 G A scaffold4527 ScafM INDEL 0041.scaffold00154 920571 1 A . scaffold4527 ScafM SNP 0041.scaffold00154 920575 1 A T scaffold4527 ScafM SNP 0041.scaffold00154 920577 1 A T scaffold4527 ScafM SNP 0041.scaffold00154 920592 1 G A scaffold4527 ScafM INDEL 0041.scaffold00154 920596 1 . A scaffold4527 ScafM SNP 0041.scaffold00154 920598 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920606 1 T C scaffold4527 ScafM SNP 0041.scaffold00154 920612 1 C T scaffold4527 ScafM SNP 0041.scaffold00154 920615 2 GT CC scaffold4527 ScafM INDEL 0041.scaffold00154 920626 3 CCG ... scaffold4527 ScafM SNP 0041.scaffold00154 920639 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920641 1 G A scaffold4527 ScafM SNP 0041.scaffold00154 920646 1 A G scaffold4527 ScafM SNP 0041.scaffold00154 922966 2 AC CA scaffold10222 ScafM SNP 0041.scaffold00154 922974 1 G C scaffold10222 ScafM SNP 0041.scaffold00154 923001 1 T G scaffold10222 ScafM SNP 0041.scaffold00154 923035 1 G A scaffold10222 ScafM SNP 0041.scaffold00154 923047 1 A T scaffold10222 ScafM SNP 0041.scaffold00154 923065 2 AG GA scaffold10222 ScafM SNP 0041.scaffold00154 923076 1 C A scaffold10222 ScafM SNP 0041.scaffold00154 923105 1 T G scaffold10222 ScafM SNP 0041.scaffold00154 923116 1 T G scaffold10222 ScafM SNP 0041.scaffold00154 923149 1 C G scaffold10222 ScafM INDEL 0041.scaffold00154 934959 16 CCTATACTCAAAATGA ................ scaffold4857 ScafM SNP 0041.scaffold00154 935011 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 935022 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 935164 1 T A scaffold4857 ScafM SNP 0041.scaffold00154 935183 1 A T scaffold4857 ScafM SNP 0041.scaffold00154 935188 1 A T scaffold4857 ScafM INDEL 0041.scaffold00154 935198 3 TGA ... scaffold4857 Both SNP 0041.scaffold00154 935244 1 C G scaffold4857 Both SNP 0041.scaffold00154 935259 1 C T scaffold4857 Both INDEL 0041.scaffold00154 935269 1 . C scaffold4857 ScafM SNP 0041.scaffold00154 935349 1 A T scaffold4857 ScafM SNP 0041.scaffold00154 935352 1 T G scaffold4857 Both SNP 0041.scaffold00154 935547 1 C A scaffold4857 Both SNP 0041.scaffold00154 935572 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 935980 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 936017 1 A C scaffold4857 Both SNP 0041.scaffold00154 936021 1 T A scaffold4857 ScafM INDEL 0041.scaffold00154 936163 1 G . scaffold4857 ScafM INDEL 0041.scaffold00154 936165 1 . C scaffold4857 Both SNP 0041.scaffold00154 936190 1 C T scaffold4857 Both SNP 0041.scaffold00154 936235 1 G A scaffold4857 Both SNP 0041.scaffold00154 936399 1 T G scaffold4857 Both SNP 0041.scaffold00154 936421 1 T G scaffold4857 Both SNP 0041.scaffold00154 936518 1 G A scaffold4857 Both SNP 0041.scaffold00154 936581 1 A G scaffold4857 ScafM INDEL 0041.scaffold00154 936606 3 AAG ... scaffold4857 Both SNP 0041.scaffold00154 936629 1 C T scaffold4857 Both SNP 0041.scaffold00154 936681 1 C T scaffold4857 Both SNP 0041.scaffold00154 936725 1 G A scaffold4857 ScafM INDEL 0041.scaffold00154 936759 5 CCTTA ..... scaffold4857 ReadM INDEL 0041.scaffold00154 936798 2 AA .. - ScafM INDEL 0041.scaffold00154 936798 3 AAA ..G scaffold4857 Both SNP 0041.scaffold00154 937019 1 C G scaffold4857 Both SNP 0041.scaffold00154 937085 1 G T scaffold4857 Both SNP 0041.scaffold00154 937155 1 T C scaffold4857 Both SNP 0041.scaffold00154 937228 1 G A scaffold4857 Both SNP 0041.scaffold00154 937249 1 T C scaffold4857 Both SNP 0041.scaffold00154 937278 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 937328 1 A G scaffold4857 ScafM INDEL 0041.scaffold00154 937330 1 T . scaffold4857 ScafM SNP 0041.scaffold00154 937352 1 G A scaffold4857 ScafM SNP 0041.scaffold00154 937354 1 T G scaffold4857 ScafM SNP 0041.scaffold00154 937361 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 937367 1 A C scaffold4857 ScafM SNP 0041.scaffold00154 937388 1 A C scaffold4857 ScafM SNP 0041.scaffold00154 937421 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 937427 2 TA GT scaffold4857 ScafM SNP 0041.scaffold00154 937729 3 CAA ACC scaffold4857 ScafM SNP 0041.scaffold00154 937764 1 T C scaffold4857 ScafM INDEL 0041.scaffold00154 937771 2 .. AT scaffold4857 Both SNP 0041.scaffold00154 937794 2 CC TA scaffold4857 Both SNP 0041.scaffold00154 938006 1 G C scaffold4857 ScafM INDEL 0041.scaffold00154 938030 8 ........ AACTAACC scaffold4857 ScafM SNP 0041.scaffold00154 938032 1 G C scaffold4857 Both SNP 0041.scaffold00154 938074 1 T C scaffold4857 Both SNP 0041.scaffold00154 938193 1 A G scaffold4857 Both SNP 0041.scaffold00154 938251 1 C G scaffold4857 ScafM SNP 0041.scaffold00154 938302 2 AG TC scaffold4857 Both SNP 0041.scaffold00154 938308 1 G T scaffold4857 Both SNP 0041.scaffold00154 938573 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 938769 1 G C scaffold4857 ScafM INDEL 0041.scaffold00154 938873 1 A . scaffold4857 ScafM SNP 0041.scaffold00154 938875 1 A C scaffold4857 ScafM SNP 0041.scaffold00154 938903 1 C A scaffold4857 ScafM INDEL 0041.scaffold00154 938918 5 TGGGA ..... scaffold4857 ScafM INDEL 0041.scaffold00154 939060 2 GA .. scaffold4857 ScafM SNP 0041.scaffold00154 939087 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 939106 1 A C scaffold4857 ScafM SNP 0041.scaffold00154 939110 1 A G scaffold4857 ScafM SNP 0041.scaffold00154 939123 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 939164 1 T G scaffold4857 Both SNP 0041.scaffold00154 939230 1 A T scaffold4857 Both SNP 0041.scaffold00154 939239 1 T C scaffold4857 Both SNP 0041.scaffold00154 939295 1 G T scaffold4857 Both SNP 0041.scaffold00154 939380 1 C A scaffold4857 Both SNP 0041.scaffold00154 939536 1 G T scaffold4857 Both SNP 0041.scaffold00154 939568 1 G A scaffold4857 Both SNP 0041.scaffold00154 939606 1 C A scaffold4857 Both SNP 0041.scaffold00154 939624 1 G A scaffold4857 Both SNP 0041.scaffold00154 939696 1 G C scaffold4857 Both SNP 0041.scaffold00154 939915 1 G C scaffold4857 Both SNP 0041.scaffold00154 939926 1 A C scaffold4857 Both SNP 0041.scaffold00154 939948 1 A G scaffold4857 Both SNP 0041.scaffold00154 939964 1 T G scaffold4857 Both SNP 0041.scaffold00154 940048 1 G C scaffold4857 Both SNP 0041.scaffold00154 940089 1 A G scaffold4857 Both SNP 0041.scaffold00154 940175 1 G T scaffold4857 Both SNP 0041.scaffold00154 940200 1 G A scaffold4857 Both SNP 0041.scaffold00154 940227 1 A T scaffold4857 ScafM INDEL 0041.scaffold00154 940404 1 . A scaffold4857 ScafM SNP 0041.scaffold00154 940412 1 T A scaffold4857 ReadM INDEL 0041.scaffold00154 940636 1 . A - ReadM INDEL 0041.scaffold00154 940724 1 . A - ReadM SNP 0041.scaffold00154 940888 1 T C - ReadM SNP 0041.scaffold00154 941069 1 T A - ReadM INDEL 0041.scaffold00154 941228 2 .. AA - ReadM SNP 0041.scaffold00154 941298 1 C T - ReadM SNP 0041.scaffold00154 941524 1 G A - ReadM INDEL 0041.scaffold00154 941530 1 . A - ReadM SNP 0041.scaffold00154 941667 1 C A - ReadM SNP 0041.scaffold00154 941684 1 G A - ReadM SNP 0041.scaffold00154 941875 1 G C - ReadM SNP 0041.scaffold00154 942070 1 C T - ScafM SNP 0041.scaffold00154 944384 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 944428 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 944473 1 C T scaffold4857 ScafM SNP 0041.scaffold00154 944475 1 G A scaffold4857 ScafM SNP 0041.scaffold00154 944482 1 A G scaffold4857 Both SNP 0041.scaffold00154 944549 1 A T scaffold4857 ScafM SNP 0041.scaffold00154 944570 1 A G scaffold4857 ScafM INDEL 0041.scaffold00154 944617 3 CAA ... scaffold4857 Both SNP 0041.scaffold00154 944627 1 T C scaffold4857 ScafM SNP 0041.scaffold00154 944682 1 G A scaffold4857 ReadM SNP 0041.scaffold00154 944962 1 G A - ReadM SNP 0041.scaffold00154 945599 1 C T - ReadM SNP 0041.scaffold00154 945645 1 G A - ReadM SNP 0041.scaffold00154 947390 1 A G - ScafM SNP 0041.scaffold00154 949110 1 A G scaffold605 ScafM SNP 0041.scaffold00154 949128 1 T A scaffold605 ScafM SNP 0041.scaffold00154 949135 1 T G scaffold605 ScafM SNP 0041.scaffold00154 949138 1 C G scaffold605 ScafM SNP 0041.scaffold00154 949171 1 G T scaffold605 ScafM SNP 0041.scaffold00154 949175 1 T C scaffold605 ScafM SNP 0041.scaffold00154 949194 1 A C scaffold605 ScafM SNP 0041.scaffold00154 949197 1 A C scaffold605 ScafM SNP 0041.scaffold00154 949202 1 T G scaffold605 ScafM SNP 0041.scaffold00154 949232 1 T C scaffold605 ScafM SNP 0041.scaffold00154 949275 1 G A scaffold605 ScafM SNP 0041.scaffold00154 949285 1 A G scaffold605 ScafM SNP 0041.scaffold00154 949301 1 T G scaffold605 ScafM SNP 0041.scaffold00154 949303 1 C A scaffold605 ScafM INDEL 0041.scaffold00154 949325 1 T . scaffold605 ScafM SNP 0041.scaffold00154 949349 1 T C scaffold605 ScafM SNP 0041.scaffold00154 949367 1 G C scaffold605 ScafM SNP 0041.scaffold00154 949380 1 C T scaffold605 ScafM SNP 0041.scaffold00154 949403 1 A G scaffold605 ScafM SNP 0041.scaffold00154 949412 1 A G scaffold605 ScafM SNP 0041.scaffold00154 949419 1 C A scaffold605 ScafM INDEL 0041.scaffold00154 949425 1 G . scaffold605 ScafM INDEL 0041.scaffold00154 949428 1 . G scaffold605 ScafM SNP 0041.scaffold00154 949447 1 G T scaffold605 ScafM SNP 0041.scaffold00154 949478 1 T A scaffold605 ScafM SNP 0041.scaffold00154 949488 1 A G scaffold605 ScafM SNP 0041.scaffold00154 949552 1 G T scaffold605 ReadM SNP 0041.scaffold00154 955613 1 C T - ScafM SNP 0041.scaffold00154 957296 1 T C scaffold35543 ScafM SNP 0041.scaffold00154 957348 1 T A scaffold35543 ScafM SNP 0041.scaffold00154 957357 1 C T scaffold35543 ScafM SNP 0041.scaffold00154 957384 1 T C scaffold35543 ScafM SNP 0041.scaffold00154 957433 1 T C scaffold35543 ScafM SNP 0041.scaffold00154 957490 1 A G scaffold35543 ScafM INDEL 0041.scaffold00154 957523 1 T . scaffold35543 ScafM INDEL 0041.scaffold00154 957610 1 . C scaffold35543 ReadM SNP 0041.scaffold00154 958014 1 T C - ReadM SNP 0041.scaffold00154 958150 1 A G - ReadM SNP 0041.scaffold00154 958156 1 A T - ScafM SNP 0041.scaffold00154 958479 1 A G scaffold35543 ScafM SNP 0041.scaffold00154 958489 1 A G scaffold35543 ScafM SNP 0041.scaffold00154 958498 1 G A scaffold35543 Both SNP 0041.scaffold00154 958698 1 G A scaffold35543 Both SNP 0041.scaffold00154 959049 1 G A scaffold35543 Both SNP 0041.scaffold00154 959377 1 G A scaffold35543 Both SNP 0041.scaffold00154 959457 1 C T scaffold35543 Both SNP 0041.scaffold00154 959662 1 C T scaffold35543 ScafM SNP 0041.scaffold00154 960555 1 T A scaffold35543 ScafM INDEL 0041.scaffold00154 990910 1 . T scaffold25964 ReadM INDEL 0041.scaffold00154 991152 1 A . - Both SNP 0041.scaffold00154 991302 1 C T scaffold25964 Both SNP 0041.scaffold00154 991363 1 C T scaffold25964 ScafM INDEL 0041.scaffold00154 991391 17 GGTGAGAGAGAAACGAG ................. scaffold25964 ScafM SNP 0041.scaffold00154 991434 1 A G scaffold25964 ScafM INDEL 0041.scaffold00154 991448 1 G . scaffold25964 ScafM SNP 0041.scaffold00154 991491 1 G T scaffold25964 ScafM INDEL 0041.scaffold00154 991500 1 . A scaffold25964 ScafM SNP 0041.scaffold00154 991554 1 G T scaffold25964 ReadM SNP 0041.scaffold00154 991613 1 G A - ReadM SNP 0041.scaffold00154 991756 1 G C - ReadM SNP 0041.scaffold00154 991813 1 A C - ReadM SNP 0041.scaffold00154 991872 1 C A - Both INDEL 0041.scaffold00154 992129 1 A . scaffold25964 Both SNP 0041.scaffold00154 992297 1 C A scaffold25964 Both SNP 0041.scaffold00154 992316 1 C A scaffold25964 Both SNP 0041.scaffold00154 992388 1 A G scaffold25964 Both SNP 0041.scaffold00154 992451 1 G A scaffold25964 Both SNP 0041.scaffold00154 992476 1 G A scaffold25964 Both SNP 0041.scaffold00154 992485 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 992553 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 992575 2 GC AT scaffold25964 ScafM SNP 0041.scaffold00154 992578 1 A T scaffold25964 Both SNP 0041.scaffold00154 992648 1 C T scaffold25964 Both SNP 0041.scaffold00154 992654 1 T A scaffold25964 ReadM SNP 0041.scaffold00154 993199 1 C T - ReadM SNP 0041.scaffold00154 993306 1 G A - ReadM SNP 0041.scaffold00154 993314 1 T C - Both INDEL 0041.scaffold00154 993327 1 A . scaffold25964 ScafM SNP 0041.scaffold00154 993674 1 T C scaffold25964 ReadM SNP 0041.scaffold00154 994612 1 T C - ReadM SNP 0041.scaffold00154 994669 1 A C - Both SNP 0041.scaffold00154 994725 1 C G scaffold25964 Both SNP 0041.scaffold00154 994766 1 A C scaffold25964 Both INDEL 0041.scaffold00154 994833 1 G . scaffold25964 Both SNP 0041.scaffold00154 994887 1 A T scaffold25964 Both SNP 0041.scaffold00154 994916 1 G A scaffold25964 ReadM SNP 0041.scaffold00154 994974 1 C T - ReadM INDEL 0041.scaffold00154 995112 2 TG .. - ReadM SNP 0041.scaffold00154 995119 1 C T - ReadM SNP 0041.scaffold00154 995622 1 G A - ReadM INDEL 0041.scaffold00154 995636 1 . A - ReadM SNP 0041.scaffold00154 995847 1 C T - ReadM INDEL 0041.scaffold00154 995927 1 T . - ReadM INDEL 0041.scaffold00154 996347 1 T . - ReadM SNP 0041.scaffold00154 996388 1 T C - ReadM SNP 0041.scaffold00154 996484 1 G T - ScafM SNP 0041.scaffold00154 997032 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 997064 1 T C scaffold25964 Both SNP 0041.scaffold00154 997668 1 C T scaffold25964 Both SNP 0041.scaffold00154 997749 1 G A scaffold25964 Both SNP 0041.scaffold00154 997803 1 T G scaffold25964 ScafM INDEL 0041.scaffold00154 997900 9 ......... GTCAGGCAA scaffold25964 ScafM SNP 0041.scaffold00154 997910 1 A G scaffold25964 Both SNP 0041.scaffold00154 997960 1 G T scaffold25964 Both SNP 0041.scaffold00154 997983 1 T C scaffold25964 Both SNP 0041.scaffold00154 998008 1 A T scaffold25964 ScafM INDEL 0041.scaffold00154 998071 3 ... TTT scaffold25964 Both SNP 0041.scaffold00154 998300 1 G C scaffold25964 ReadM SNP 0041.scaffold00154 998342 1 C A - ReadM SNP 0041.scaffold00154 998434 1 A G - ReadM SNP 0041.scaffold00154 998678 1 A G - Both SNP 0041.scaffold00154 998975 1 G A scaffold25964 Both SNP 0041.scaffold00154 999109 1 C A scaffold25964 ScafM SNP 0041.scaffold00154 999255 1 T C scaffold25964 ScafM SNP 0041.scaffold00154 999267 1 C A scaffold25964 ScafM SNP 0041.scaffold00154 999271 1 C T scaffold25964 ScafM SNP 0041.scaffold00154 999274 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 999286 1 G C scaffold25964 ScafM SNP 0041.scaffold00154 999293 1 A G scaffold25964 ScafM INDEL 0041.scaffold00154 999365 1 A . scaffold25964 ScafM SNP 0041.scaffold00154 999989 1 G A scaffold25964 ScafM INDEL 0041.scaffold00154 1000040 3 ... AAA scaffold25964 ScafM SNP 0041.scaffold00154 1000109 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 1000489 1 C G scaffold25964 ScafM SNP 0041.scaffold00154 1000544 1 T A scaffold25964 ScafM SNP 0041.scaffold00154 1000608 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1000619 1 G A scaffold25964 ScafM INDEL 0041.scaffold00154 1000646 3 CGG ... scaffold25964 ScafM INDEL 0041.scaffold00154 1000650 2 AC .. scaffold25964 ScafM SNP 0041.scaffold00154 1000653 1 G C scaffold25964 ScafM SNP 0041.scaffold00154 1000677 1 T C scaffold25964 ScafM SNP 0041.scaffold00154 1000680 1 C A scaffold25964 ScafM SNP 0041.scaffold00154 1000687 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 1000691 1 T C scaffold25964 ScafM INDEL 0041.scaffold00154 1000693 1 . C scaffold25964 ScafM INDEL 0041.scaffold00154 1000694 2 .A CC scaffold25964 ScafM INDEL 0041.scaffold00154 1000697 2 .T CC scaffold25964 ScafM SNP 0041.scaffold00154 1000702 1 C T scaffold25964 ScafM SNP 0041.scaffold00154 1000704 2 CG AT scaffold25964 ScafM INDEL 0041.scaffold00154 1000707 3 ... AGT scaffold25964 ScafM SNP 0041.scaffold00154 1000709 3 AAA TCT scaffold25964 ScafM SNP 0041.scaffold00154 1000713 1 A T scaffold25964 ScafM INDEL 0041.scaffold00154 1000715 1 . C scaffold25964 ScafM SNP 0041.scaffold00154 1000719 3 AAC TTT scaffold25964 ScafM SNP 0041.scaffold00154 1000723 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1000725 2 TT GG scaffold25964 ScafM SNP 0041.scaffold00154 1000730 3 CCT AAA scaffold25964 ScafM INDEL 0041.scaffold00154 1000734 1 A . scaffold25964 ScafM SNP 0041.scaffold00154 1000741 2 TA AT scaffold25964 ScafM SNP 0041.scaffold00154 1000747 1 C T scaffold25964 ScafM INDEL 0041.scaffold00154 1000749 3 CCA ... scaffold25964 ScafM INDEL 0041.scaffold00154 1000755 1 C . scaffold25964 ScafM SNP 0041.scaffold00154 1000801 1 G C scaffold25964 ScafM SNP 0041.scaffold00154 1000828 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 1000842 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1000852 1 C T scaffold25964 ScafM SNP 0041.scaffold00154 1000941 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1000996 1 G T scaffold25964 ScafM SNP 0041.scaffold00154 1001056 2 GA AG scaffold25964 ScafM SNP 0041.scaffold00154 1008227 1 C T scaffold25964 ScafM SNP 0041.scaffold00154 1008272 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1008282 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 1008321 1 G A scaffold25964 ScafM INDEL 0041.scaffold00154 1008354 2 GT .. scaffold25964 ScafM INDEL 0041.scaffold00154 1008360 1 C . scaffold25964 ScafM SNP 0041.scaffold00154 1008405 1 C T scaffold25964 ScafM SNP 0041.scaffold00154 1008414 1 T G scaffold25964 ScafM INDEL 0041.scaffold00154 1008422 3 TTT ..A scaffold25964 ScafM SNP 0041.scaffold00154 1008496 1 G T scaffold25964 ScafM SNP 0041.scaffold00154 1009277 1 C T scaffold25964 ScafM INDEL 0041.scaffold00154 1009356 17 ................. ATCATTTTACTCTCTCG scaffold25964 ScafM INDEL 0041.scaffold00154 1009357 1 . C scaffold25964 ScafM SNP 0041.scaffold00154 1009388 1 C A scaffold25964 ScafM SNP 0041.scaffold00154 1009404 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1009427 1 T C scaffold25964 ScafM INDEL 0041.scaffold00154 1009462 1 . A scaffold25964 ScafM SNP 0041.scaffold00154 1009471 1 T C scaffold25964 ScafM SNP 0041.scaffold00154 1009544 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 1009603 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 1009617 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1009624 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1009632 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 1009657 1 G A scaffold25964 ScafM INDEL 0041.scaffold00154 1009675 3 ... GTA scaffold25964 ScafM SNP 0041.scaffold00154 1009694 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1009710 1 C T scaffold25964 ScafM INDEL 0041.scaffold00154 1009713 3 ... ACT scaffold25964 ScafM SNP 0041.scaffold00154 1009716 2 CC TG scaffold25964 ScafM SNP 0041.scaffold00154 1009766 1 T C scaffold25964 ScafM SNP 0041.scaffold00154 1009772 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1009782 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1009788 1 A T scaffold25964 ScafM SNP 0041.scaffold00154 1009808 1 C T scaffold25964 ScafM INDEL 0041.scaffold00154 1009823 1 T . scaffold25964 ScafM SNP 0041.scaffold00154 1009841 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 1009843 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1009865 1 A G scaffold25964 ScafM SNP 0041.scaffold00154 1009871 1 G A scaffold25964 ScafM SNP 0041.scaffold00154 1010045 1 C G scaffold25964 ScafM SNP 0041.scaffold00154 1010536 1 T G scaffold25964 ScafM INDEL 0041.scaffold00154 1010553 7 TCGAGAG ....... scaffold25964 ScafM INDEL 0041.scaffold00154 1010710 28 TTTCATCACCTGCTCGCTCCAATTCTTC ............................ scaffold25964 ScafM INDEL 0041.scaffold00154 1010741 8 TTAGTGAT ........ scaffold25964 ScafM INDEL 0041.scaffold00154 1010751 11 TTAGAGTTTGT ........... scaffold25964 ScafM INDEL 0041.scaffold00154 1010765 3 CCC ... scaffold25964 ScafM INDEL 0041.scaffold00154 1010769 2 TT .. scaffold25964 ScafM INDEL 0041.scaffold00154 1010772 8 TTTGCTCG ........ scaffold25964 ScafM INDEL 0041.scaffold00154 1010782 2 CT .. scaffold25964 ScafM INDEL 0041.scaffold00154 1010786 4 AAAG .... scaffold25964 ScafM INDEL 0041.scaffold00154 1010791 2 GT .. scaffold25964 ScafM INDEL 0041.scaffold00154 1010794 5 ACACA ..... scaffold25964 ScafM INDEL 0041.scaffold00154 1010802 17 ACCAAAAATAATCTAGA ................. scaffold25964 ScafM SNP 0041.scaffold00154 1010848 1 C T scaffold25964 Both SNP 0041.scaffold00154 1010923 1 C A scaffold25964 Both SNP 0041.scaffold00154 1011004 1 G A scaffold25964 Both SNP 0041.scaffold00154 1011031 1 C G scaffold25964 Both SNP 0041.scaffold00154 1011037 1 C T scaffold25964 Both SNP 0041.scaffold00154 1011153 1 C T scaffold25964 Both INDEL 0041.scaffold00154 1011177 1 . G scaffold25964 ReadM SNP 0041.scaffold00154 1011276 1 A G - ReadM SNP 0041.scaffold00154 1011318 1 C T - ReadM SNP 0041.scaffold00154 1011356 1 C T - ReadM SNP 0041.scaffold00154 1011530 1 T G - ReadM SNP 0041.scaffold00154 1011568 1 C A - ReadM SNP 0041.scaffold00154 1011623 1 T C - ReadM SNP 0041.scaffold00154 1011678 1 C G - ReadM SNP 0041.scaffold00154 1011773 1 C T - ReadM SNP 0041.scaffold00154 1011844 1 G A - ReadM SNP 0041.scaffold00154 1012053 1 A G - ReadM SNP 0041.scaffold00154 1012180 1 G A - ReadM SNP 0041.scaffold00154 1012295 1 C T - ReadM SNP 0041.scaffold00154 1012337 1 T C - ReadM SNP 0041.scaffold00154 1012474 1 T G - ReadM SNP 0041.scaffold00154 1012552 1 C T - ReadM SNP 0041.scaffold00154 1012745 1 G A - ReadM SNP 0041.scaffold00154 1012829 1 T C - ReadM SNP 0041.scaffold00154 1012836 1 G A - ReadM SNP 0041.scaffold00154 1012855 1 C A - ReadM SNP 0041.scaffold00154 1012871 1 C T - ReadM SNP 0041.scaffold00154 1012892 1 G A - Both SNP 0041.scaffold00154 1013037 1 C A scaffold25964 Both SNP 0041.scaffold00154 1013039 1 G A scaffold25964 ReadM INDEL 0041.scaffold00154 1013196 1 T . - ReadM SNP 0041.scaffold00154 1013229 1 G T - ReadM SNP 0041.scaffold00154 1013234 1 T G - ReadM SNP 0041.scaffold00154 1013471 1 C T - Both SNP 0041.scaffold00154 1013635 1 C T scaffold25964 ReadM SNP 0041.scaffold00154 1013674 1 C T - ReadM SNP 0041.scaffold00154 1013778 1 C A - ReadM SNP 0041.scaffold00154 1013807 1 T C - ReadM SNP 0041.scaffold00154 1013819 1 C A - ScafM SNP 0041.scaffold00154 1013843 1 G A scaffold25964 Both SNP 0041.scaffold00154 1013921 1 C A scaffold25964 Both SNP 0041.scaffold00154 1013949 1 T A scaffold25964 ReadM SNP 0041.scaffold00154 1014027 1 G A - ReadM SNP 0041.scaffold00154 1014320 1 C T - ReadM SNP 0041.scaffold00154 1014717 1 A T - ReadM SNP 0041.scaffold00154 1014734 1 G A - Both INDEL 0041.scaffold00154 1014843 1 . C scaffold25964 ScafM SNP 0041.scaffold00154 1014994 1 T G scaffold25964 Both SNP 0041.scaffold00154 1015055 1 G A scaffold25964 Both SNP 0041.scaffold00154 1015167 1 T C scaffold25964 Both SNP 0041.scaffold00154 1015230 1 C T scaffold25964 Both SNP 0041.scaffold00154 1015298 1 T C scaffold25964 ReadM SNP 0041.scaffold00154 1015358 1 C T - Both SNP 0041.scaffold00154 1015549 1 T G scaffold25964 Both SNP 0041.scaffold00154 1016251 1 C A scaffold25964 Both SNP 0041.scaffold00154 1016266 1 T A scaffold25964 ScafM SNP 0041.scaffold00154 1016309 1 T C scaffold25964 Both SNP 0041.scaffold00154 1016366 1 C A scaffold25964 ScafM SNP 0041.scaffold00154 1016476 1 T G scaffold25964 ScafM SNP 0041.scaffold00154 1016551 1 T C scaffold25964 ReadM INDEL 0041.scaffold00154 1016641 1 T . - ReadM SNP 0041.scaffold00154 1016671 1 T C - ReadM SNP 0041.scaffold00154 1016723 1 G A - ReadM SNP 0041.scaffold00154 1016792 1 A T - ReadM SNP 0041.scaffold00154 1016812 1 G T - ReadM SNP 0041.scaffold00154 1016835 1 G A - ReadM SNP 0041.scaffold00154 1017035 1 T C - ReadM SNP 0041.scaffold00154 1017082 1 A G - ReadM INDEL 0041.scaffold00154 1017156 1 T . - ReadM INDEL 0041.scaffold00154 1017378 1 A . - ReadM SNP 0041.scaffold00154 1017840 1 T C - ReadM SNP 0041.scaffold00154 1017876 1 T C - ReadM SNP 0041.scaffold00154 1017915 1 A G - ReadM SNP 0041.scaffold00154 1018638 1 C T - ReadM SNP 0041.scaffold00154 1018734 1 G A - ReadM SNP 0041.scaffold00154 1018828 1 G A - ReadM SNP 0041.scaffold00154 1019224 1 T C - ReadM SNP 0041.scaffold00154 1019473 1 A G - ReadM SNP 0041.scaffold00154 1020231 1 T C - ReadM SNP 0041.scaffold00154 1020235 1 G T - ReadM SNP 0041.scaffold00154 1020256 1 G A - ReadM INDEL 0041.scaffold00154 1020355 1 . A - ReadM SNP 0041.scaffold00154 1020391 1 C T - ReadM INDEL 0041.scaffold00154 1020584 1 G . - ReadM SNP 0041.scaffold00154 1020657 1 A G - ReadM SNP 0041.scaffold00154 1020669 1 A C - ReadM SNP 0041.scaffold00154 1020710 1 T C - ReadM SNP 0041.scaffold00154 1020818 1 T A - ReadM SNP 0041.scaffold00154 1020927 1 T C - ReadM SNP 0041.scaffold00154 1021336 1 G A - ReadM SNP 0041.scaffold00154 1021446 1 A T - ReadM SNP 0041.scaffold00154 1021459 1 A G - ReadM SNP 0041.scaffold00154 1021533 1 T A - ReadM SNP 0041.scaffold00154 1021681 1 A C - ReadM SNP 0041.scaffold00154 1021692 1 A T - ReadM SNP 0041.scaffold00154 1021847 1 A G - ReadM SNP 0041.scaffold00154 1021876 1 A C - ReadM SNP 0041.scaffold00154 1021909 1 C T - Both SNP 0041.scaffold00154 1021997 1 C G scaffold7428 Both SNP 0041.scaffold00154 1022024 1 C A scaffold7428 Both SNP 0041.scaffold00154 1022047 1 A T scaffold7428 ScafM SNP 0041.scaffold00154 1022055 1 G A scaffold7428 ScafM SNP 0041.scaffold00154 1022058 1 T G scaffold7428 Both SNP 0041.scaffold00154 1022254 1 T C scaffold7428 Both SNP 0041.scaffold00154 1022394 1 T G scaffold7428 Both SNP 0041.scaffold00154 1022518 1 A C scaffold7428 ReadM SNP 0041.scaffold00154 1022636 1 A T - ReadM SNP 0041.scaffold00154 1022724 1 G A - ReadM SNP 0041.scaffold00154 1022796 1 C T - ReadM SNP 0041.scaffold00154 1022803 1 T G - ReadM SNP 0041.scaffold00154 1022857 1 G A - ReadM SNP 0041.scaffold00154 1023178 1 G T - ReadM SNP 0041.scaffold00154 1023256 1 C T - ReadM SNP 0041.scaffold00154 1023452 1 A C - ReadM SNP 0041.scaffold00154 1023525 1 T G - ReadM SNP 0041.scaffold00154 1023626 1 A G - Both SNP 0041.scaffold00154 1023758 1 C T scaffold7428 Both SNP 0041.scaffold00154 1023875 1 T C scaffold7428 Both SNP 0041.scaffold00154 1023892 1 A T scaffold7428 Both SNP 0041.scaffold00154 1024076 1 G C scaffold7428 Both SNP 0041.scaffold00154 1024091 1 G T scaffold7428 ScafM SNP 0041.scaffold00154 1024109 1 C T scaffold7428 Both SNP 0041.scaffold00154 1024230 1 G A scaffold7428 Both SNP 0041.scaffold00154 1024287 1 C G scaffold7428 Both SNP 0041.scaffold00154 1024437 1 T C scaffold7428 Both SNP 0041.scaffold00154 1024478 1 C T scaffold7428 Both SNP 0041.scaffold00154 1024585 1 G A scaffold7428 Both SNP 0041.scaffold00154 1024641 1 G A scaffold7428 Both SNP 0041.scaffold00154 1024646 1 G A scaffold7428 ScafM SNP 0041.scaffold00154 1024677 2 AT CC scaffold7428 Both SNP 0041.scaffold00154 1024788 1 C T scaffold7428 Both SNP 0041.scaffold00154 1024803 1 G A scaffold7428 Both SNP 0041.scaffold00154 1024923 1 T G scaffold7428 Both SNP 0041.scaffold00154 1025055 1 T C scaffold7428 Both SNP 0041.scaffold00154 1025195 1 C A scaffold7428 Both INDEL 0041.scaffold00154 1025256 1 C . scaffold7428 Both SNP 0041.scaffold00154 1025278 1 C T scaffold7428 Both SNP 0041.scaffold00154 1025306 1 G A scaffold7428 Both SNP 0041.scaffold00154 1025325 1 C T scaffold7428 Both SNP 0041.scaffold00154 1025348 1 T C scaffold7428 Both SNP 0041.scaffold00154 1025421 1 A T scaffold7428 Both SNP 0041.scaffold00154 1025520 1 C T scaffold7428 Both SNP 0041.scaffold00154 1025537 1 C A scaffold7428 Both SNP 0041.scaffold00154 1025668 1 C T scaffold7428 Both SNP 0041.scaffold00154 1025687 1 T A scaffold7428 Both SNP 0041.scaffold00154 1025717 1 A G scaffold7428 Both INDEL 0041.scaffold00154 1025769 1 A . scaffold7428 Both SNP 0041.scaffold00154 1025811 1 G A scaffold7428 Both SNP 0041.scaffold00154 1025911 1 G A scaffold7428 Both SNP 0041.scaffold00154 1025964 1 G A scaffold7428 Both SNP 0041.scaffold00154 1026178 1 T G scaffold7428 Both SNP 0041.scaffold00154 1026194 1 T C scaffold7428 Both SNP 0041.scaffold00154 1026368 1 A T scaffold7428 ScafM SNP 0041.scaffold00154 1026478 1 C T scaffold7428 Both SNP 0041.scaffold00154 1026484 1 C G scaffold7428 ScafM SNP 0041.scaffold00154 1026567 1 T A scaffold7428 ScafM SNP 0041.scaffold00154 1026605 1 T G scaffold7428 ScafM SNP 0041.scaffold00154 1026628 1 T G scaffold7428 ReadM SNP 0041.scaffold00154 1026651 1 C A - ReadM SNP 0041.scaffold00154 1026665 1 A T - ReadM SNP 0041.scaffold00154 1026753 1 C T - ReadM SNP 0041.scaffold00154 1027023 1 G A - ReadM SNP 0041.scaffold00154 1027025 1 G A - ReadM SNP 0041.scaffold00154 1027087 1 T C - Both SNP 0041.scaffold00154 1027118 1 T A scaffold7428 ScafM SNP 0041.scaffold00154 1027314 1 T C scaffold7428 ScafM SNP 0041.scaffold00154 1027323 1 T C scaffold7428 ScafM SNP 0041.scaffold00154 1027326 1 A G scaffold7428 ScafM SNP 0041.scaffold00154 1027337 1 A G scaffold7428 ReadM SNP 0041.scaffold00154 1027393 1 C T - ReadM SNP 0041.scaffold00154 1027432 1 A G - ReadM INDEL 0041.scaffold00154 1027456 1 A . - ReadM SNP 0041.scaffold00154 1027479 1 G A - ReadM SNP 0041.scaffold00154 1027524 1 A C - ReadM INDEL 0041.scaffold00154 1027616 1 . T - ReadM SNP 0041.scaffold00154 1027658 1 C T - ReadM SNP 0041.scaffold00154 1027762 1 A T - ReadM SNP 0041.scaffold00154 1027889 1 A C - ReadM SNP 0041.scaffold00154 1027921 1 A C - ReadM SNP 0041.scaffold00154 1028084 1 A G - ScafM SNP 0041.scaffold00154 1028180 1 A C scaffold7428 Both SNP 0041.scaffold00154 1028249 1 A C scaffold7428 Both SNP 0041.scaffold00154 1028251 1 T G scaffold7428 Both SNP 0041.scaffold00154 1028340 1 T C scaffold7428 Both SNP 0041.scaffold00154 1028365 1 T C scaffold7428 Both SNP 0041.scaffold00154 1028378 1 A G scaffold7428 ScafM SNP 0041.scaffold00154 1028400 1 A G scaffold7428 ReadM SNP 0041.scaffold00154 1028517 1 C G - ReadM SNP 0041.scaffold00154 1028575 1 T G - ReadM SNP 0041.scaffold00154 1028717 1 A T - ReadM SNP 0041.scaffold00154 1028787 1 G A - ReadM SNP 0041.scaffold00154 1029024 1 C T - ReadM SNP 0041.scaffold00154 1029117 1 C T - ReadM SNP 0041.scaffold00154 1029132 1 C T - ReadM SNP 0041.scaffold00154 1029243 1 C A - ReadM SNP 0041.scaffold00154 1029298 1 T A - ReadM SNP 0041.scaffold00154 1029307 1 T C - ReadM SNP 0041.scaffold00154 1029334 1 G C - ReadM SNP 0041.scaffold00154 1029471 1 C T - ReadM SNP 0041.scaffold00154 1029473 1 A G - ReadM SNP 0041.scaffold00154 1029671 1 G T - ReadM SNP 0041.scaffold00154 1029700 1 A C - ReadM SNP 0041.scaffold00154 1029705 1 A C - ReadM SNP 0041.scaffold00154 1029898 1 T C - ReadM SNP 0041.scaffold00154 1029912 1 A G - ReadM SNP 0041.scaffold00154 1030015 1 C T - ReadM SNP 0041.scaffold00154 1030040 1 T C - ReadM SNP 0041.scaffold00154 1030129 1 G A - ReadM SNP 0041.scaffold00154 1030150 1 G C - ReadM SNP 0041.scaffold00154 1030346 1 T C - ReadM SNP 0041.scaffold00154 1030365 1 G A - ReadM INDEL 0041.scaffold00154 1030423 1 T . - ReadM SNP 0041.scaffold00154 1030534 1 C T - ReadM SNP 0041.scaffold00154 1030783 1 A G - ReadM SNP 0041.scaffold00154 1030880 1 T C - ReadM SNP 0041.scaffold00154 1030971 1 G A - ReadM SNP 0041.scaffold00154 1031102 1 T G - ReadM SNP 0041.scaffold00154 1031269 1 C T - ReadM SNP 0041.scaffold00154 1031329 1 T G - ReadM SNP 0041.scaffold00154 1031359 1 G C - ReadM SNP 0041.scaffold00154 1031449 1 T G - ReadM SNP 0041.scaffold00154 1031465 1 C T - Both SNP 0041.scaffold00154 1031527 1 C T scaffold7428 ReadM SNP 0041.scaffold00154 1031630 1 A T - ReadM SNP 0041.scaffold00154 1031703 1 C T - ReadM SNP 0041.scaffold00154 1031726 1 A T - ReadM SNP 0041.scaffold00154 1031760 1 A G - ReadM SNP 0041.scaffold00154 1031864 1 A T - ReadM SNP 0041.scaffold00154 1032030 1 G T - ReadM SNP 0041.scaffold00154 1032170 1 G T - ReadM SNP 0041.scaffold00154 1032184 1 A G - ReadM SNP 0041.scaffold00154 1032221 1 G A - ReadM SNP 0041.scaffold00154 1032411 1 G T - ReadM INDEL 0041.scaffold00154 1032505 1 G . - ReadM SNP 0041.scaffold00154 1032537 1 T C - ReadM SNP 0041.scaffold00154 1032575 1 T C - ReadM SNP 0041.scaffold00154 1032654 1 C T - ReadM SNP 0041.scaffold00154 1032700 1 G T - ReadM INDEL 0041.scaffold00154 1032984 1 A . - ReadM SNP 0041.scaffold00154 1033026 1 T A - Both SNP 0041.scaffold00154 1033075 1 T C scaffold7428 Both SNP 0041.scaffold00154 1033110 1 A G scaffold7428 Both SNP 0041.scaffold00154 1033130 1 C A scaffold7428 ScafM SNP 0041.scaffold00154 1033237 1 T C scaffold7428 Both INDEL 0041.scaffold00154 1033378 1 . T scaffold7428 Both SNP 0041.scaffold00154 1033494 1 T C scaffold7428 Both SNP 0041.scaffold00154 1033517 1 G C scaffold7428 Both SNP 0041.scaffold00154 1033649 1 T C scaffold7428 ScafM INDEL 0041.scaffold00154 1033734 5 TTTTT ..... scaffold7428 ScafM SNP 0041.scaffold00154 1033743 1 G C scaffold7428 Both SNP 0041.scaffold00154 1033799 1 C G scaffold7428 Both SNP 0041.scaffold00154 1033841 1 A G scaffold7428 Both SNP 0041.scaffold00154 1033867 1 C A scaffold7428 Both SNP 0041.scaffold00154 1034086 1 G A scaffold7428 ReadM SNP 0041.scaffold00154 1034107 1 C A - ReadM SNP 0041.scaffold00154 1034165 1 A G - ReadM SNP 0041.scaffold00154 1034211 1 C T - ReadM INDEL 0041.scaffold00154 1034365 1 . C - ReadM SNP 0041.scaffold00154 1034487 1 T A - ReadM SNP 0041.scaffold00154 1034652 1 G T - ReadM SNP 0041.scaffold00154 1034678 1 T C - ReadM SNP 0041.scaffold00154 1035135 1 C A - ReadM SNP 0041.scaffold00154 1035252 1 T C - ReadM SNP 0041.scaffold00154 1035490 1 A G - ReadM SNP 0041.scaffold00154 1035512 1 T A - ReadM SNP 0041.scaffold00154 1035517 1 A T - ReadM SNP 0041.scaffold00154 1035533 1 T C - ScafM SNP 0041.scaffold00154 1038985 1 A G scaffold7428 ScafM SNP 0041.scaffold00154 1039054 1 C T scaffold7428 ScafM SNP 0041.scaffold00154 1039059 1 C T scaffold7428 ReadM SNP 0041.scaffold00154 1039331 1 A G - ReadM SNP 0041.scaffold00154 1039433 1 A G - ReadM SNP 0041.scaffold00154 1039481 1 T C - ScafM SNP 0041.scaffold00154 1039806 1 A G scaffold7428 ScafM SNP 0041.scaffold00154 1039829 1 T C scaffold7428 ScafM SNP 0041.scaffold00154 1039857 1 T G scaffold7428 ScafM SNP 0041.scaffold00154 1039934 1 A T scaffold7428 ScafM SNP 0042.scaffold00155 9715 1 T C scaffold7895 ScafM SNP 0042.scaffold00155 9738 1 A T scaffold7895 ScafM SNP 0042.scaffold00155 9748 1 A G scaffold7895 ScafM SNP 0042.scaffold00155 9777 1 A G scaffold7895 ScafM SNP 0042.scaffold00155 9783 1 A G scaffold7895 ScafM SNP 0042.scaffold00155 9825 1 C G scaffold7895 ScafM SNP 0042.scaffold00155 9829 1 T G scaffold7895 ScafM SNP 0042.scaffold00155 9834 1 A G scaffold7895 ScafM SNP 0042.scaffold00155 9876 1 C T scaffold7895 ScafM SNP 0042.scaffold00155 9881 1 C T scaffold7895 ScafM SNP 0042.scaffold00155 82946 1 T C scaffold6704 ScafM SNP 0042.scaffold00155 83364 1 T C scaffold14817 ScafM SNP 0042.scaffold00155 83613 2 AT CC scaffold14817 ScafM SNP 0042.scaffold00155 83662 1 T C scaffold14817 ScafM SNP 0042.scaffold00155 83691 1 T C scaffold14817 ScafM SNP 0042.scaffold00155 83698 1 G A scaffold14817 ScafM SNP 0042.scaffold00155 83707 1 A G scaffold14817 ScafM SNP 0042.scaffold00155 85537 1 G T scaffold18610 ScafM INDEL 0042.scaffold00155 85540 1 T . scaffold18610 ScafM SNP 0042.scaffold00155 85551 1 T G scaffold18610 ScafM SNP 0042.scaffold00155 85807 1 T A scaffold18610 ScafM SNP 0042.scaffold00155 85809 1 T A scaffold18610 ScafM SNP 0042.scaffold00155 86292 2 AT GA scaffold18610 ScafM INDEL 0042.scaffold00155 108495 8 ........ AATTTATA scaffold15067 ScafM SNP 0042.scaffold00155 108507 1 T C scaffold15067 ScafM SNP 0042.scaffold00155 108736 1 A C scaffold15067 ScafM SNP 0042.scaffold00155 108755 1 T C scaffold15067 ScafM SNP 0042.scaffold00155 108895 1 A T scaffold15067 ScafM SNP 0042.scaffold00155 109215 1 T G scaffold15067 ScafM SNP 0042.scaffold00155 109245 1 A T scaffold15067 ScafM SNP 0042.scaffold00155 109490 1 A G scaffold15067 ScafM SNP 0042.scaffold00155 117963 1 C T scaffold12973 ScafM SNP 0042.scaffold00155 117994 1 T G scaffold12973 ScafM INDEL 0042.scaffold00155 118116 1 . G scaffold12973 ScafM SNP 0042.scaffold00155 118156 1 C A scaffold12973 ScafM SNP 0042.scaffold00155 118176 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 124595 1 G C scaffold12973 ScafM SNP 0042.scaffold00155 124648 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 124685 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 124706 1 A G scaffold12973 ScafM SNP 0042.scaffold00155 124708 1 A C scaffold12973 ScafM SNP 0042.scaffold00155 124712 1 G A scaffold12973 ScafM SNP 0042.scaffold00155 124719 1 C T scaffold12973 ScafM SNP 0042.scaffold00155 124725 1 A G scaffold12973 ReadM INDEL 0042.scaffold00155 136603 2 .. AA - ScafM INDEL 0042.scaffold00155 178130 1 T . scaffold12973 ScafM SNP 0042.scaffold00155 208833 1 C T scaffold12973 ScafM SNP 0042.scaffold00155 208848 1 G A scaffold12973 ScafM SNP 0042.scaffold00155 208857 1 G A scaffold12973 ScafM SNP 0042.scaffold00155 208883 1 A G scaffold12973 ScafM SNP 0042.scaffold00155 208909 1 A C scaffold12973 ScafM SNP 0042.scaffold00155 208963 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 209016 2 AG CC scaffold12973 ScafM SNP 0042.scaffold00155 209032 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 209058 1 G T scaffold12973 ScafM SNP 0042.scaffold00155 209129 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 209169 1 T C scaffold12973 ScafM SNP 0042.scaffold00155 209191 1 T A scaffold12973 ScafM SNP 0042.scaffold00155 209248 1 T G scaffold12973 ScafM SNP 0042.scaffold00155 210140 1 C T scaffold1293 ScafM SNP 0042.scaffold00155 210235 1 A G scaffold1293 ScafM SNP 0042.scaffold00155 210238 1 T G scaffold1293 ScafM SNP 0042.scaffold00155 210278 1 G A scaffold1293 ScafM SNP 0042.scaffold00155 210303 1 A C scaffold1293 ScafM SNP 0042.scaffold00155 210345 1 A G scaffold1293 ScafM SNP 0042.scaffold00155 210399 1 A G scaffold1293 ScafM INDEL 0042.scaffold00155 210478 2 CT .. scaffold1293 ScafM SNP 0042.scaffold00155 210534 1 C A scaffold1293 ReadM INDEL 0042.scaffold00155 252846 1 . A - ScafM INDEL 0042.scaffold00155 274337 4 .... AAAA scaffold18643 ScafM SNP 0042.scaffold00155 274338 1 T A scaffold18643 ScafM SNP 0042.scaffold00155 288987 1 C T scaffold21919 ScafM SNP 0042.scaffold00155 289010 1 A G scaffold21919 ScafM INDEL 0042.scaffold00155 325705 2 TA .. scaffold2422 ScafM SNP 0042.scaffold00155 339752 1 G A scaffold2422 ScafM SNP 0042.scaffold00155 339985 1 T C scaffold2422 ScafM SNP 0042.scaffold00155 363295 1 T A scaffold11500 ScafM SNP 0042.scaffold00155 363298 1 T A scaffold11500 ScafM INDEL 0042.scaffold00155 363377 1 . G scaffold11500 ScafM INDEL 0042.scaffold00155 363381 8 TTTCTGCA .AAAAATT scaffold11500 ScafM SNP 0042.scaffold00155 363424 3 TTC AAA scaffold11500 ScafM SNP 0042.scaffold00155 363440 1 T A scaffold11500 ScafM SNP 0042.scaffold00155 363453 1 G T scaffold11500 ScafM SNP 0042.scaffold00155 363475 1 A C scaffold11500 ScafM SNP 0042.scaffold00155 363478 1 T A scaffold11500 ScafM SNP 0042.scaffold00155 363482 1 G A scaffold11500 ScafM SNP 0042.scaffold00155 363606 1 C T scaffold11500 ScafM SNP 0042.scaffold00155 363614 1 G T scaffold11500 ScafM SNP 0042.scaffold00155 363940 1 G A scaffold8751 ScafM SNP 0042.scaffold00155 363987 1 G T scaffold8751 ScafM INDEL 0042.scaffold00155 364053 2 TA .. scaffold8751 ScafM SNP 0042.scaffold00155 364064 1 G A scaffold8751 ScafM SNP 0042.scaffold00155 364430 1 T G scaffold13625 ScafM SNP 0042.scaffold00155 364447 1 C A scaffold13625 ScafM SNP 0042.scaffold00155 367079 1 A T scaffold27485 ScafM SNP 0042.scaffold00155 368153 1 G A scaffold27485 ScafM SNP 0042.scaffold00155 368225 1 T C scaffold27485 ScafM SNP 0042.scaffold00155 368253 1 C T scaffold27485 ScafM SNP 0042.scaffold00155 368317 1 C T scaffold27485 ScafM SNP 0042.scaffold00155 368326 1 C T scaffold27485 ScafM SNP 0042.scaffold00155 375087 1 C T scaffold5011 ScafM SNP 0042.scaffold00155 375284 1 A G scaffold5011 ReadM SNP 0042.scaffold00155 441309 1 A C - ReadM SNP 0042.scaffold00155 538613 1 C T - ScafM SNP 0042.scaffold00155 542747 2 CG GT scaffold3013 ScafM SNP 0042.scaffold00155 542755 1 C G scaffold3013 ScafM SNP 0042.scaffold00155 542758 1 T C scaffold3013 ScafM INDEL 0042.scaffold00155 542882 4 .... TTTT scaffold3013 ScafM SNP 0042.scaffold00155 542966 1 G C scaffold3013 ScafM SNP 0042.scaffold00155 543045 1 C G scaffold3013 ScafM INDEL 0042.scaffold00155 543076 3 ... TAT scaffold3013 ScafM SNP 0042.scaffold00155 546702 1 A T scaffold3013 ScafM SNP 0042.scaffold00155 547174 1 C T scaffold3013 ScafM SNP 0042.scaffold00155 548484 1 A G scaffold3013 ReadM INDEL 0042.scaffold00155 587476 1 . T - ScafM INDEL 0042.scaffold00155 618999 1 T . scaffold11156 ScafM INDEL 0042.scaffold00155 620283 1 G . scaffold11156 ScafM SNP 0042.scaffold00155 629260 1 T G scaffold11156 ScafM INDEL 0042.scaffold00155 638555 10 .......... GGGGGGGGGG scaffold11156 ScafM SNP 0042.scaffold00155 752123 1 T G scaffold5068 ScafM SNP 0042.scaffold00155 752171 1 T C scaffold5068 ScafM SNP 0042.scaffold00155 752183 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 752256 1 A C scaffold5068 ScafM SNP 0042.scaffold00155 752309 1 T C scaffold5068 ScafM INDEL 0042.scaffold00155 752334 1 . T scaffold5068 ScafM SNP 0042.scaffold00155 752403 1 A G scaffold5068 ScafM SNP 0042.scaffold00155 752465 1 T C scaffold5068 ScafM SNP 0042.scaffold00155 752514 1 G A scaffold5068 ScafM SNP 0042.scaffold00155 752533 1 A C scaffold5068 ScafM SNP 0042.scaffold00155 752548 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 752598 1 A G scaffold5068 ScafM SNP 0042.scaffold00155 752613 1 T A scaffold5068 ScafM SNP 0042.scaffold00155 752654 1 A G scaffold5068 ScafM SNP 0042.scaffold00155 752659 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 752665 1 G A scaffold5068 ScafM SNP 0042.scaffold00155 752732 1 C G scaffold5068 ScafM SNP 0042.scaffold00155 752921 1 T A scaffold5068 ScafM SNP 0042.scaffold00155 752929 1 C A scaffold5068 ScafM SNP 0042.scaffold00155 752959 1 G C scaffold5068 ScafM SNP 0042.scaffold00155 753067 1 G A scaffold5068 ScafM SNP 0042.scaffold00155 753183 1 T C scaffold5068 ScafM SNP 0042.scaffold00155 753278 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 753409 1 A G scaffold5068 ScafM SNP 0042.scaffold00155 753535 1 T C scaffold5068 ScafM INDEL 0042.scaffold00155 753584 1 C . scaffold5068 ScafM SNP 0042.scaffold00155 753589 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 753686 1 C T scaffold5068 ScafM SNP 0042.scaffold00155 753729 1 G C scaffold5068 ScafM INDEL 0042.scaffold00155 780970 4 .... GGGG scaffold1533 ScafM SNP 0042.scaffold00155 811589 1 G A scaffold2495 Both INDEL 0042.scaffold00155 900341 1 . A scaffold7157 ReadM INDEL 0042.scaffold00155 902113 1 A . - ScafM SNP 0042.scaffold00155 902628 1 C A scaffold820 ScafM SNP 0042.scaffold00155 902635 1 A G scaffold820 ScafM SNP 0042.scaffold00155 902644 1 A G scaffold820 ScafM SNP 0042.scaffold00155 902647 1 C T scaffold820 ScafM SNP 0042.scaffold00155 902649 1 T G scaffold820 ScafM INDEL 0042.scaffold00155 902653 1 . G scaffold820 ScafM SNP 0042.scaffold00155 902663 2 CG TA scaffold820 ScafM SNP 0042.scaffold00155 902680 1 G C scaffold820 ScafM SNP 0042.scaffold00155 902682 1 T C scaffold820 ScafM SNP 0042.scaffold00155 902685 1 C A scaffold820 ScafM SNP 0042.scaffold00155 902695 1 G A scaffold820 ScafM SNP 0042.scaffold00155 902706 1 T A scaffold820 ScafM SNP 0042.scaffold00155 902716 1 C G scaffold820 ScafM SNP 0042.scaffold00155 902721 1 A T scaffold820 ScafM SNP 0042.scaffold00155 902729 1 C T scaffold820 ScafM INDEL 0042.scaffold00155 902772 2 .. AA scaffold820 ScafM SNP 0042.scaffold00155 902777 1 G A scaffold820 ScafM SNP 0042.scaffold00155 902794 1 C T scaffold820 ScafM SNP 0042.scaffold00155 902798 1 C G scaffold820 ScafM SNP 0042.scaffold00155 902813 1 C T scaffold820 ScafM SNP 0042.scaffold00155 902815 1 C G scaffold820 ScafM SNP 0042.scaffold00155 902827 1 G A scaffold820 ScafM SNP 0042.scaffold00155 902851 1 A C scaffold820 ScafM SNP 0042.scaffold00155 902857 1 C G scaffold820 ScafM SNP 0042.scaffold00155 902888 2 GG TA scaffold820 ScafM SNP 0042.scaffold00155 902895 1 G A scaffold820 ScafM INDEL 0042.scaffold00155 902911 9 ......... TAACTTTAG scaffold820 ScafM SNP 0042.scaffold00155 902929 1 G A scaffold820 ScafM SNP 0042.scaffold00155 902935 1 C G scaffold820 ScafM INDEL 0042.scaffold00155 902961 2 AC .. scaffold820 ScafM INDEL 0042.scaffold00155 903003 1 . C scaffold820 ScafM SNP 0042.scaffold00155 903005 1 T A scaffold820 ScafM INDEL 0042.scaffold00155 903020 1 T . scaffold820 ScafM SNP 0042.scaffold00155 903042 1 A C scaffold820 ScafM SNP 0042.scaffold00155 903047 1 C A scaffold820 ScafM SNP 0042.scaffold00155 903065 1 G A scaffold820 ScafM SNP 0042.scaffold00155 903068 1 A G scaffold820 ScafM SNP 0042.scaffold00155 903094 1 T C scaffold820 ScafM SNP 0042.scaffold00155 903096 1 C T scaffold820 ScafM SNP 0042.scaffold00155 903115 1 T C scaffold820 ScafM SNP 0042.scaffold00155 903141 1 C T scaffold820 ScafM SNP 0042.scaffold00155 903157 1 T A scaffold820 ScafM SNP 0042.scaffold00155 903197 1 A G scaffold820 ScafM SNP 0042.scaffold00155 903200 1 T C scaffold820 ScafM SNP 0042.scaffold00155 903214 1 A T scaffold820 ScafM INDEL 0042.scaffold00155 903237 4 ATTT .... scaffold820 ScafM SNP 0042.scaffold00155 903255 1 G A scaffold820 ScafM SNP 0042.scaffold00155 903257 1 T C scaffold820 ScafM SNP 0042.scaffold00155 905192 1 C T scaffold880 ScafM SNP 0042.scaffold00155 905210 1 C G scaffold880 ScafM SNP 0042.scaffold00155 905240 1 C A scaffold880 ScafM SNP 0042.scaffold00155 905245 1 G A scaffold880 ScafM SNP 0042.scaffold00155 905266 1 C A scaffold880 ScafM INDEL 0042.scaffold00155 905269 2 AT .. scaffold880 ScafM SNP 0042.scaffold00155 905284 1 T C scaffold880 ScafM SNP 0042.scaffold00155 905477 1 T G scaffold2481 ScafM SNP 0042.scaffold00155 905489 1 T C scaffold2481 ScafM SNP 0042.scaffold00155 905496 1 T G scaffold2481 ScafM SNP 0042.scaffold00155 905522 1 G A scaffold2481 ScafM SNP 0042.scaffold00155 905536 1 G T scaffold2481 ScafM SNP 0042.scaffold00155 905543 1 T C scaffold2481 ScafM SNP 0042.scaffold00155 905551 1 T G scaffold2481 ScafM SNP 0042.scaffold00155 905561 1 G A scaffold2481 ScafM SNP 0042.scaffold00155 905607 1 C T scaffold2481 ScafM SNP 0042.scaffold00155 905609 1 A G scaffold2481 ScafM SNP 0042.scaffold00155 905634 1 T C scaffold2481 ScafM SNP 0042.scaffold00155 905677 1 G A scaffold2481 ScafM SNP 0042.scaffold00155 905685 1 G A scaffold2481 ReadM INDEL 0042.scaffold00155 934213 1 . T - ScafM INDEL 0042.scaffold00155 939062 1 A . scaffold14054 ScafM INDEL 0042.scaffold00155 959132 1 . A scaffold18127 ReadM SNP 0043.scaffold00157 2880 1 T G - ReadM SNP 0043.scaffold00157 3641 1 C A - ReadM SNP 0043.scaffold00157 3663 1 G T - ReadM SNP 0043.scaffold00157 3768 1 T C - ReadM SNP 0043.scaffold00157 3928 1 A C - ReadM SNP 0043.scaffold00157 4280 1 T A - ReadM SNP 0043.scaffold00157 4348 1 C T - ReadM SNP 0043.scaffold00157 4716 1 G A - ReadM SNP 0043.scaffold00157 4926 1 G A - ReadM SNP 0043.scaffold00157 5116 1 T G - Both INDEL 0043.scaffold00157 5162 1 C . scaffold2915 Both SNP 0043.scaffold00157 5291 1 G C scaffold2915 Both INDEL 0043.scaffold00157 5466 2 .. TT scaffold2915 Both SNP 0043.scaffold00157 5488 1 A T scaffold2915 ScafM INDEL 0043.scaffold00157 6720 5 ..... TACGG scaffold2915 Both SNP 0043.scaffold00157 6805 1 A G scaffold2915 Both SNP 0043.scaffold00157 6849 1 T C scaffold2915 Both SNP 0043.scaffold00157 6875 1 T G scaffold2915 Both SNP 0043.scaffold00157 7002 1 A T scaffold2915 Both SNP 0043.scaffold00157 7443 1 C T scaffold2915 Both INDEL 0043.scaffold00157 7483 1 T . scaffold2915 Both SNP 0043.scaffold00157 7527 1 T C scaffold2915 ReadM SNP 0043.scaffold00157 7579 1 T C - ReadM SNP 0043.scaffold00157 7584 1 G T - ReadM SNP 0043.scaffold00157 7824 1 C T - ReadM SNP 0043.scaffold00157 7914 1 T C - ReadM SNP 0043.scaffold00157 7931 1 A C - ReadM SNP 0043.scaffold00157 8016 1 A T - ReadM SNP 0043.scaffold00157 8356 1 T G - ReadM SNP 0043.scaffold00157 8390 1 A G - ReadM SNP 0043.scaffold00157 8567 1 G A - ReadM SNP 0043.scaffold00157 8709 1 G A - ReadM SNP 0043.scaffold00157 8731 1 C T - ReadM SNP 0043.scaffold00157 8785 1 A T - ReadM SNP 0043.scaffold00157 8845 1 T C - ReadM SNP 0043.scaffold00157 8892 1 A T - ReadM INDEL 0043.scaffold00157 8979 1 A . - ReadM SNP 0043.scaffold00157 9135 1 A G - ReadM SNP 0043.scaffold00157 9736 1 G A - ReadM SNP 0043.scaffold00157 9753 1 C T - ReadM SNP 0043.scaffold00157 9930 1 T C - ReadM SNP 0043.scaffold00157 10140 1 T C - ReadM SNP 0043.scaffold00157 10157 1 T G - ReadM SNP 0043.scaffold00157 10182 1 A G - ReadM SNP 0043.scaffold00157 10388 1 T G - ReadM SNP 0043.scaffold00157 10406 1 A T - ReadM INDEL 0043.scaffold00157 10482 1 . C - ReadM SNP 0043.scaffold00157 10715 1 G A - ReadM SNP 0043.scaffold00157 10861 1 C T - ReadM INDEL 0043.scaffold00157 10873 1 . T - ReadM SNP 0043.scaffold00157 10950 1 T C - ReadM SNP 0043.scaffold00157 10967 1 C A - ReadM INDEL 0043.scaffold00157 11156 2 .. TG - ReadM SNP 0043.scaffold00157 11253 1 G A - ReadM SNP 0043.scaffold00157 11398 1 C T - ReadM SNP 0043.scaffold00157 11497 1 A T - ReadM SNP 0043.scaffold00157 11551 1 C A - ReadM SNP 0043.scaffold00157 11606 1 C G - ReadM SNP 0043.scaffold00157 11618 1 G A - ReadM SNP 0043.scaffold00157 11671 1 T A - ReadM SNP 0043.scaffold00157 11695 1 G A - ReadM SNP 0043.scaffold00157 11708 1 A G - ReadM SNP 0043.scaffold00157 11745 1 C T - ReadM SNP 0043.scaffold00157 11986 1 C T - ReadM SNP 0043.scaffold00157 12070 1 T G - Both SNP 0043.scaffold00157 12116 1 A G scaffold2915 ScafM SNP 0043.scaffold00157 12163 1 T G scaffold2915 Both SNP 0043.scaffold00157 12297 1 T C scaffold2915 Both SNP 0043.scaffold00157 12314 1 A G scaffold2915 Both INDEL 0043.scaffold00157 12409 1 T . scaffold2915 Both SNP 0043.scaffold00157 12468 1 T G scaffold2915 ReadM SNP 0043.scaffold00157 12588 1 A C - ReadM SNP 0043.scaffold00157 12794 1 T C - Both INDEL 0043.scaffold00157 12841 1 . C scaffold2915 Both SNP 0043.scaffold00157 12869 1 C T scaffold2915 ReadM SNP 0043.scaffold00157 13028 1 T C - ReadM SNP 0043.scaffold00157 13195 1 A T - ReadM SNP 0043.scaffold00157 13387 1 C T - ReadM SNP 0043.scaffold00157 13408 1 G T - ReadM SNP 0043.scaffold00157 13432 1 C G - ReadM SNP 0043.scaffold00157 13468 1 A G - ReadM SNP 0043.scaffold00157 13477 1 A G - ReadM SNP 0043.scaffold00157 13829 1 G A - Both SNP 0043.scaffold00157 14197 1 A C scaffold2915 Both SNP 0043.scaffold00157 14209 1 G T scaffold2915 ScafM SNP 0043.scaffold00157 14237 1 T A scaffold2915 Both SNP 0043.scaffold00157 14251 1 A T scaffold2915 Both SNP 0043.scaffold00157 14282 1 T C scaffold2915 Both SNP 0043.scaffold00157 14314 1 G T scaffold2915 Both SNP 0043.scaffold00157 14375 1 A G scaffold2915 Both SNP 0043.scaffold00157 14725 1 A G scaffold2915 Both SNP 0043.scaffold00157 14739 1 T C scaffold2915 Both INDEL 0043.scaffold00157 14854 1 . T scaffold2915 Both SNP 0043.scaffold00157 14959 1 A T scaffold2915 Both INDEL 0043.scaffold00157 15124 3 AAT ... scaffold2915 Both SNP 0043.scaffold00157 15232 1 G C scaffold2915 ScafM INDEL 0043.scaffold00157 15306 1 . A scaffold2915 Both SNP 0043.scaffold00157 15494 1 C G scaffold2915 Both SNP 0043.scaffold00157 15543 1 T C scaffold2915 Both SNP 0043.scaffold00157 15701 1 G A scaffold2915 Both SNP 0043.scaffold00157 15741 1 A G scaffold2915 Both SNP 0043.scaffold00157 15747 1 T A scaffold2915 Both SNP 0043.scaffold00157 15925 1 T C scaffold2915 Both SNP 0043.scaffold00157 15929 1 C T scaffold2915 Both SNP 0043.scaffold00157 16023 1 A T scaffold2915 ScafM SNP 0043.scaffold00157 16128 1 T G scaffold2915 Both SNP 0043.scaffold00157 16141 1 G A scaffold2915 Both SNP 0043.scaffold00157 16226 1 G T scaffold2915 Both SNP 0043.scaffold00157 16326 1 C G scaffold2915 Both SNP 0043.scaffold00157 16338 1 G A scaffold2915 Both SNP 0043.scaffold00157 16397 1 C T scaffold2915 ScafM SNP 0043.scaffold00157 16416 3 AAT TTC scaffold2915 Both SNP 0043.scaffold00157 16478 1 C T scaffold2915 Both SNP 0043.scaffold00157 16813 1 G A scaffold2915 Both SNP 0043.scaffold00157 16970 1 C T scaffold2915 Both SNP 0043.scaffold00157 17076 1 G A scaffold2915 Both SNP 0043.scaffold00157 17336 1 T G scaffold2915 Both SNP 0043.scaffold00157 17559 1 T C scaffold2915 Both SNP 0043.scaffold00157 17629 1 A C scaffold2915 ScafM SNP 0043.scaffold00157 17795 1 C T scaffold2915 Both SNP 0043.scaffold00157 17935 1 C A scaffold2915 Both SNP 0043.scaffold00157 17960 1 C T scaffold2915 Both SNP 0043.scaffold00157 17975 1 T A scaffold2915 ScafM SNP 0043.scaffold00157 18019 2 GA AT scaffold2915 Both SNP 0043.scaffold00157 18175 1 C T scaffold2915 Both SNP 0043.scaffold00157 18264 1 T C scaffold2915 Both SNP 0043.scaffold00157 18403 1 C A scaffold2915 ReadM SNP 0043.scaffold00157 18613 1 T C - ReadM SNP 0043.scaffold00157 18624 1 C G - ReadM INDEL 0043.scaffold00157 18656 1 . T - ReadM SNP 0043.scaffold00157 18881 1 C G - ReadM SNP 0043.scaffold00157 18934 1 C T - ReadM SNP 0043.scaffold00157 18939 1 C T - ReadM SNP 0043.scaffold00157 18984 1 A C - ReadM SNP 0043.scaffold00157 19168 1 T C - ReadM SNP 0043.scaffold00157 19192 1 C G - ReadM SNP 0043.scaffold00157 19232 1 C T - ReadM SNP 0043.scaffold00157 19249 1 T C - ReadM SNP 0043.scaffold00157 19290 1 T A - ReadM SNP 0043.scaffold00157 19330 1 A G - ReadM SNP 0043.scaffold00157 19342 1 A G - ReadM SNP 0043.scaffold00157 19451 1 C T - ReadM SNP 0043.scaffold00157 19463 1 T C - ReadM INDEL 0043.scaffold00157 19585 1 A . - ReadM SNP 0043.scaffold00157 19815 1 G T - ReadM SNP 0043.scaffold00157 19899 1 A G - ReadM SNP 0043.scaffold00157 19929 1 C T - ReadM SNP 0043.scaffold00157 19983 1 C T - ReadM SNP 0043.scaffold00157 20015 1 A G - ReadM SNP 0043.scaffold00157 20124 1 T G - ReadM SNP 0043.scaffold00157 20151 1 A G - ReadM SNP 0043.scaffold00157 20319 1 A G - ReadM SNP 0043.scaffold00157 20471 1 T A - ReadM SNP 0043.scaffold00157 20505 1 G A - ReadM SNP 0043.scaffold00157 20550 1 T C - ReadM SNP 0043.scaffold00157 20671 1 G A - ReadM SNP 0043.scaffold00157 20851 1 G A - ReadM SNP 0043.scaffold00157 20927 1 C T - ReadM SNP 0043.scaffold00157 20978 1 T C - ReadM SNP 0043.scaffold00157 21031 1 A C - ReadM SNP 0043.scaffold00157 21055 1 T C - ReadM SNP 0043.scaffold00157 21075 1 C T - ReadM SNP 0043.scaffold00157 21169 1 G A - ReadM SNP 0043.scaffold00157 21218 1 C A - ReadM SNP 0043.scaffold00157 21297 1 T C - ReadM SNP 0043.scaffold00157 21488 1 C T - ReadM SNP 0043.scaffold00157 21509 1 A G - ReadM SNP 0043.scaffold00157 21692 1 G A - ReadM SNP 0043.scaffold00157 21906 1 T A - ReadM SNP 0043.scaffold00157 22299 1 A C - Both SNP 0043.scaffold00157 22497 1 T C scaffold2915 Both SNP 0043.scaffold00157 22499 1 G A scaffold2915 Both SNP 0043.scaffold00157 22578 1 T G scaffold2915 Both SNP 0043.scaffold00157 22621 1 C T scaffold2915 Both SNP 0043.scaffold00157 22631 1 G A scaffold2915 ReadM INDEL 0043.scaffold00157 23299 1 A . - ReadM SNP 0043.scaffold00157 23362 1 G A - ReadM SNP 0043.scaffold00157 23369 1 A C - ReadM INDEL 0043.scaffold00157 23421 1 . A - ReadM SNP 0043.scaffold00157 23461 1 C A - ReadM SNP 0043.scaffold00157 23466 1 T G - ReadM SNP 0043.scaffold00157 23742 1 G C - ReadM SNP 0043.scaffold00157 25016 1 A C - ReadM SNP 0043.scaffold00157 25075 1 C T - ReadM INDEL 0043.scaffold00157 25168 1 . A - ReadM SNP 0043.scaffold00157 25238 1 A T - ReadM SNP 0043.scaffold00157 25330 1 C G - ReadM SNP 0043.scaffold00157 25337 1 A G - ReadM SNP 0043.scaffold00157 25446 1 T A - ReadM SNP 0043.scaffold00157 25457 1 T G - ReadM SNP 0043.scaffold00157 25577 1 A G - ReadM SNP 0043.scaffold00157 25616 1 C T - ReadM SNP 0043.scaffold00157 25733 1 G C - ReadM SNP 0043.scaffold00157 25738 1 A C - ReadM SNP 0043.scaffold00157 25785 1 T C - ReadM SNP 0043.scaffold00157 25913 1 A G - ReadM SNP 0043.scaffold00157 26016 1 A T - ReadM SNP 0043.scaffold00157 26027 1 A G - ReadM SNP 0043.scaffold00157 26037 1 A T - ReadM SNP 0043.scaffold00157 26295 1 A G - ReadM SNP 0043.scaffold00157 26841 1 G A - ReadM SNP 0043.scaffold00157 26892 1 T C - ReadM SNP 0043.scaffold00157 26905 1 C T - ReadM SNP 0043.scaffold00157 26964 1 C A - ReadM SNP 0043.scaffold00157 27028 1 G C - ReadM INDEL 0043.scaffold00157 27109 1 . G - ReadM SNP 0043.scaffold00157 27116 1 T G - ReadM SNP 0043.scaffold00157 27245 1 C T - ReadM SNP 0043.scaffold00157 27274 1 A T - Both SNP 0043.scaffold00157 27443 1 C A scaffold2915 Both SNP 0043.scaffold00157 27491 1 C T scaffold2915 Both SNP 0043.scaffold00157 27501 1 G A scaffold2915 ReadM SNP 0043.scaffold00157 28398 1 C A - ReadM SNP 0043.scaffold00157 28597 1 G A - ReadM SNP 0043.scaffold00157 28637 1 C T - ReadM SNP 0043.scaffold00157 28737 1 T A - ReadM SNP 0043.scaffold00157 28847 1 G A - ReadM SNP 0043.scaffold00157 28890 1 A C - ReadM SNP 0043.scaffold00157 29129 1 T C - ReadM SNP 0043.scaffold00157 29188 1 A T - ReadM SNP 0043.scaffold00157 29260 1 T C - ReadM INDEL 0043.scaffold00157 29308 1 T . - ReadM SNP 0043.scaffold00157 30243 1 T C - ReadM SNP 0043.scaffold00157 30248 1 A C - ReadM SNP 0043.scaffold00157 30348 1 G A - ReadM SNP 0043.scaffold00157 30482 1 A G - ReadM SNP 0043.scaffold00157 30490 1 T C - ReadM SNP 0043.scaffold00157 30621 1 A G - ReadM SNP 0043.scaffold00157 30688 1 C G - ReadM SNP 0043.scaffold00157 31127 1 C A - ReadM SNP 0043.scaffold00157 31143 1 A T - ReadM SNP 0043.scaffold00157 31303 1 T A - ReadM SNP 0043.scaffold00157 31724 1 G A - ReadM INDEL 0043.scaffold00157 31891 2 .. AA - ReadM SNP 0043.scaffold00157 31927 1 A T - ReadM SNP 0043.scaffold00157 31949 1 G T - ReadM SNP 0043.scaffold00157 31952 1 A G - ReadM SNP 0043.scaffold00157 32070 1 C T - ReadM SNP 0043.scaffold00157 32096 1 G A - ReadM SNP 0043.scaffold00157 32125 1 G A - ReadM SNP 0043.scaffold00157 32341 1 A G - ScafM SNP 0043.scaffold00157 33119 1 A G scaffold2915 Both SNP 0043.scaffold00157 33141 1 A G scaffold2915 ReadM SNP 0043.scaffold00157 33182 1 A C - ReadM SNP 0043.scaffold00157 33207 1 C T - ReadM SNP 0043.scaffold00157 33315 1 T C - ReadM SNP 0043.scaffold00157 33405 1 T C - ReadM SNP 0043.scaffold00157 33495 1 C T - ReadM SNP 0043.scaffold00157 33521 1 A C - ReadM SNP 0043.scaffold00157 33552 1 T C - ReadM SNP 0043.scaffold00157 33614 1 C G - ReadM SNP 0043.scaffold00157 33626 1 A G - Both SNP 0043.scaffold00157 33760 1 G A scaffold2915 Both SNP 0043.scaffold00157 33815 1 A G scaffold2915 Both SNP 0043.scaffold00157 33962 1 C T scaffold2915 Both SNP 0043.scaffold00157 34005 1 T A scaffold2915 Both SNP 0043.scaffold00157 34049 1 T G scaffold2915 Both SNP 0043.scaffold00157 34159 1 A C scaffold2915 ScafM SNP 0043.scaffold00157 34233 1 T A scaffold2915 Both SNP 0043.scaffold00157 34320 1 C T scaffold2915 Both SNP 0043.scaffold00157 34354 1 T A scaffold2915 Both SNP 0043.scaffold00157 34523 1 G C scaffold2915 Both SNP 0043.scaffold00157 34744 1 C G scaffold2915 Both SNP 0043.scaffold00157 34766 1 G C scaffold2915 Both SNP 0043.scaffold00157 34832 1 C A scaffold2915 Both SNP 0043.scaffold00157 34860 1 A G scaffold2915 Both SNP 0043.scaffold00157 35245 1 G C scaffold2915 Both SNP 0043.scaffold00157 35350 1 G T scaffold2915 Both SNP 0043.scaffold00157 35424 1 A G scaffold2915 Both SNP 0043.scaffold00157 35452 1 G A scaffold2915 Both INDEL 0043.scaffold00157 35465 1 . T scaffold2915 Both SNP 0043.scaffold00157 35585 1 C A scaffold2915 ScafM SNP 0043.scaffold00157 35625 1 A T scaffold2915 ScafM SNP 0043.scaffold00157 35652 1 A T scaffold2915 ScafM INDEL 0043.scaffold00157 35656 2 TT .. scaffold2915 Both SNP 0043.scaffold00157 35707 1 C A scaffold2915 ReadM SNP 0043.scaffold00157 35845 1 G A - ReadM SNP 0043.scaffold00157 36322 1 C T - ReadM SNP 0043.scaffold00157 37216 1 G A - ReadM SNP 0043.scaffold00157 37230 1 G A - ReadM SNP 0043.scaffold00157 37377 1 A G - ScafM SNP 0043.scaffold00157 37679 1 G A scaffold2915 ScafM SNP 0043.scaffold00157 37688 1 C T scaffold2915 ScafM INDEL 0043.scaffold00157 37694 1 T . scaffold2915 ReadM SNP 0043.scaffold00157 37737 1 T C - ScafM SNP 0043.scaffold00157 37737 2 TT CC scaffold2915 ScafM SNP 0043.scaffold00157 37764 1 A T scaffold2915 ScafM SNP 0043.scaffold00157 37779 1 A C scaffold2915 ScafM SNP 0043.scaffold00157 37783 2 CA TG scaffold2915 ScafM SNP 0043.scaffold00157 37790 1 T C scaffold2915 ScafM SNP 0043.scaffold00157 37795 1 G A scaffold2915 ScafM SNP 0043.scaffold00157 37800 2 TC CA scaffold2915 ScafM SNP 0043.scaffold00157 37804 1 C T scaffold2915 ScafM SNP 0043.scaffold00157 37813 1 C T scaffold2915 ScafM SNP 0043.scaffold00157 37816 1 A G scaffold2915 Both SNP 0043.scaffold00157 37934 1 T C scaffold2915 Both SNP 0043.scaffold00157 37954 1 A G scaffold2915 Both SNP 0043.scaffold00157 37988 1 T A scaffold2915 ScafM SNP 0043.scaffold00157 38098 1 T C scaffold2915 ScafM INDEL 0043.scaffold00157 38111 5 TACAG ..... scaffold2915 ScafM SNP 0043.scaffold00157 38320 1 T C scaffold2915 Both SNP 0043.scaffold00157 38538 1 A G scaffold2915 ReadM SNP 0043.scaffold00157 38920 1 T G - Both SNP 0043.scaffold00157 39061 1 T C scaffold2915 ReadM SNP 0043.scaffold00157 39155 1 C A - ReadM SNP 0043.scaffold00157 39177 1 A G - ReadM SNP 0043.scaffold00157 39291 1 C T - Both SNP 0043.scaffold00157 39366 1 A G scaffold2915 ScafM SNP 0043.scaffold00157 39388 1 A C scaffold2915 ReadM SNP 0043.scaffold00157 39497 1 A T - ReadM SNP 0043.scaffold00157 39862 1 G C - ReadM SNP 0043.scaffold00157 39941 1 C T - ReadM SNP 0043.scaffold00157 39981 1 C A - ReadM SNP 0043.scaffold00157 40024 1 T C - ReadM SNP 0043.scaffold00157 40109 1 T C - ReadM SNP 0043.scaffold00157 40116 1 C A - Both SNP 0043.scaffold00157 40348 1 G A scaffold2915 Both SNP 0043.scaffold00157 40458 1 A G scaffold2915 Both SNP 0043.scaffold00157 40463 1 A C scaffold2915 Both SNP 0043.scaffold00157 40512 1 C G scaffold2915 ReadM SNP 0043.scaffold00157 40595 1 A G - ReadM SNP 0043.scaffold00157 40787 1 C G - ReadM SNP 0043.scaffold00157 40803 1 A G - ReadM SNP 0043.scaffold00157 40848 1 A G - ReadM SNP 0043.scaffold00157 41122 1 A G - ReadM SNP 0043.scaffold00157 41140 1 A C - ReadM INDEL 0043.scaffold00157 41155 1 . A - ReadM SNP 0043.scaffold00157 41273 1 T C - Both SNP 0043.scaffold00157 41319 1 A C scaffold2915 ReadM SNP 0043.scaffold00157 41775 1 G A - ReadM SNP 0043.scaffold00157 41832 1 A C - ReadM SNP 0043.scaffold00157 41917 1 T G - ReadM SNP 0043.scaffold00157 41996 1 C A - ReadM SNP 0043.scaffold00157 42093 1 G C - ReadM SNP 0043.scaffold00157 42125 1 C T - ReadM SNP 0043.scaffold00157 42297 1 C G - ReadM SNP 0043.scaffold00157 42632 1 T A - ReadM SNP 0043.scaffold00157 42704 1 A C - ReadM SNP 0043.scaffold00157 42737 1 C T - ReadM SNP 0043.scaffold00157 42864 1 A G - ReadM SNP 0043.scaffold00157 42929 1 T C - ReadM SNP 0043.scaffold00157 42953 1 A C - ReadM SNP 0043.scaffold00157 43009 1 T C - ReadM SNP 0043.scaffold00157 43118 1 A G - ReadM SNP 0043.scaffold00157 43129 1 G T - ReadM SNP 0043.scaffold00157 43211 1 T C - ReadM SNP 0043.scaffold00157 43213 1 G A - ReadM SNP 0043.scaffold00157 43275 1 C T - ReadM SNP 0043.scaffold00157 43379 1 T C - ReadM SNP 0043.scaffold00157 43556 1 C T - ReadM SNP 0043.scaffold00157 43591 1 T G - ReadM SNP 0043.scaffold00157 43617 1 T C - ReadM SNP 0043.scaffold00157 43675 1 T A - ReadM SNP 0043.scaffold00157 43681 2 TT AC - ReadM SNP 0043.scaffold00157 43816 1 G C - ReadM SNP 0043.scaffold00157 44084 1 C T - ReadM SNP 0043.scaffold00157 44132 1 C T - ReadM SNP 0043.scaffold00157 44362 1 G C - ReadM SNP 0043.scaffold00157 44399 1 A G - ReadM SNP 0043.scaffold00157 44484 1 C A - ReadM SNP 0043.scaffold00157 44556 1 C T - ReadM SNP 0043.scaffold00157 44645 1 T C - ReadM SNP 0043.scaffold00157 44722 1 C A - ReadM SNP 0043.scaffold00157 45064 1 T C - ReadM SNP 0043.scaffold00157 45192 1 C A - ReadM SNP 0043.scaffold00157 45463 1 A G - Both SNP 0043.scaffold00157 45491 1 A T scaffold2915 Both SNP 0043.scaffold00157 45522 1 G T scaffold2915 ReadM SNP 0043.scaffold00157 45561 1 T C - ReadM SNP 0043.scaffold00157 45574 1 A C - ReadM SNP 0043.scaffold00157 45647 1 T C - ReadM SNP 0043.scaffold00157 45762 1 A T - ReadM SNP 0043.scaffold00157 45792 1 A G - ReadM SNP 0043.scaffold00157 45920 1 T C - ReadM INDEL 0043.scaffold00157 45942 1 . T - ReadM SNP 0043.scaffold00157 45959 1 A T - ReadM INDEL 0043.scaffold00157 46060 1 . T - ReadM SNP 0043.scaffold00157 46122 1 T A - ReadM SNP 0043.scaffold00157 46171 1 T C - ReadM SNP 0043.scaffold00157 46320 1 G T - ReadM SNP 0043.scaffold00157 46330 1 G A - ReadM SNP 0043.scaffold00157 46460 1 T C - ReadM SNP 0043.scaffold00157 46607 1 G T - ReadM SNP 0043.scaffold00157 46660 1 A G - ReadM SNP 0043.scaffold00157 46665 1 G T - ReadM SNP 0043.scaffold00157 46734 1 C T - ReadM SNP 0043.scaffold00157 46863 1 A G - ReadM SNP 0043.scaffold00157 47068 1 G A - Both SNP 0043.scaffold00157 47107 1 A G scaffold2915 Both SNP 0043.scaffold00157 47171 1 A G scaffold2915 Both SNP 0043.scaffold00157 47192 1 C T scaffold2915 Both SNP 0043.scaffold00157 47221 1 T C scaffold2915 ScafM SNP 0043.scaffold00157 47367 1 A T scaffold2915 Both SNP 0043.scaffold00157 47382 1 C T scaffold2915 Both SNP 0043.scaffold00157 47445 1 A G scaffold2915 Both SNP 0043.scaffold00157 47476 1 G T scaffold2915 Both SNP 0043.scaffold00157 47494 1 C T scaffold2915 Both SNP 0043.scaffold00157 47500 1 T G scaffold2915 Both SNP 0043.scaffold00157 47643 1 T C scaffold2915 Both SNP 0043.scaffold00157 47710 1 T A scaffold2915 Both SNP 0043.scaffold00157 47716 1 T A scaffold2915 Both SNP 0043.scaffold00157 47784 1 A C scaffold2915 Both SNP 0043.scaffold00157 47828 1 G A scaffold2915 Both SNP 0043.scaffold00157 48057 1 T G scaffold2915 ReadM SNP 0043.scaffold00157 48323 1 G A - ScafM SNP 0043.scaffold00157 48460 1 C T scaffold20259 ScafM SNP 0043.scaffold00157 48475 1 G A scaffold20259 ScafM SNP 0043.scaffold00157 48484 1 C G scaffold20259 ReadM SNP 0043.scaffold00157 48492 1 T A - ScafM SNP 0043.scaffold00157 48522 1 T C scaffold20259 ScafM SNP 0043.scaffold00157 48525 1 C A scaffold20259 ScafM SNP 0043.scaffold00157 48541 1 T G scaffold20259 ScafM SNP 0043.scaffold00157 48579 1 T C scaffold20259 ScafM SNP 0043.scaffold00157 48581 2 AG GC scaffold20259 ScafM SNP 0043.scaffold00157 48606 2 GG AT scaffold20259 ScafM SNP 0043.scaffold00157 48668 1 T A scaffold20259 ScafM INDEL 0043.scaffold00157 48716 1 T . scaffold20259 ScafM SNP 0043.scaffold00157 48725 1 G A scaffold20259 ScafM SNP 0043.scaffold00157 48728 1 T C scaffold20259 Both SNP 0043.scaffold00157 48736 1 A G scaffold20259 ScafM SNP 0043.scaffold00157 48776 1 T G scaffold20259 ReadM SNP 0043.scaffold00157 49019 1 G A - ReadM SNP 0043.scaffold00157 49187 1 G A - ReadM SNP 0043.scaffold00157 49197 1 C A - ReadM SNP 0043.scaffold00157 49209 1 C T - ReadM SNP 0043.scaffold00157 49358 1 T C - ReadM SNP 0043.scaffold00157 49412 1 G A - ReadM SNP 0043.scaffold00157 49542 1 A G - ReadM SNP 0043.scaffold00157 49734 1 A C - ReadM SNP 0043.scaffold00157 49908 1 G C - ReadM SNP 0043.scaffold00157 50092 1 G C - ReadM SNP 0043.scaffold00157 50221 1 A G - ReadM SNP 0043.scaffold00157 50375 1 G T - ReadM SNP 0043.scaffold00157 50383 1 T A - ReadM SNP 0043.scaffold00157 50656 1 G C - ReadM SNP 0043.scaffold00157 50692 1 G A - ReadM SNP 0043.scaffold00157 50703 1 A T - ReadM SNP 0043.scaffold00157 50877 1 T C - ReadM SNP 0043.scaffold00157 51148 1 T C - ReadM SNP 0043.scaffold00157 53027 1 T C - ReadM SNP 0043.scaffold00157 55042 1 G A - ReadM SNP 0043.scaffold00157 56802 1 G A - ReadM SNP 0043.scaffold00157 56977 1 G C - ReadM SNP 0043.scaffold00157 57451 1 T C - ReadM SNP 0043.scaffold00157 57546 1 T A - ReadM SNP 0043.scaffold00157 57918 1 A G - ReadM INDEL 0043.scaffold00157 57962 1 G . - ReadM SNP 0043.scaffold00157 59300 1 G A - ReadM SNP 0043.scaffold00157 59563 1 C T - ReadM INDEL 0043.scaffold00157 59878 1 A . - ReadM SNP 0043.scaffold00157 59971 1 C A - ReadM SNP 0043.scaffold00157 60049 1 C A - ReadM SNP 0043.scaffold00157 60066 1 T A - ReadM SNP 0043.scaffold00157 60153 1 G T - ReadM SNP 0043.scaffold00157 60519 1 G A - ReadM SNP 0043.scaffold00157 60566 1 G A - ReadM SNP 0043.scaffold00157 60580 1 T G - ReadM SNP 0043.scaffold00157 60734 1 G A - ReadM SNP 0043.scaffold00157 60832 1 A T - ReadM SNP 0043.scaffold00157 60981 1 T C - ReadM SNP 0043.scaffold00157 61128 1 C T - ReadM SNP 0043.scaffold00157 61156 1 G A - ReadM SNP 0043.scaffold00157 61200 1 A C - ReadM SNP 0043.scaffold00157 61281 1 A G - ReadM SNP 0043.scaffold00157 61318 1 A G - ScafM SNP 0043.scaffold00157 61645 1 C T scaffold2915 ReadM SNP 0043.scaffold00157 61726 1 T C - ReadM SNP 0043.scaffold00157 61733 1 G A - ReadM SNP 0043.scaffold00157 62597 1 G A - ReadM SNP 0043.scaffold00157 62625 1 T C - ReadM SNP 0043.scaffold00157 62926 1 T C - ReadM SNP 0043.scaffold00157 63015 1 C T - ReadM SNP 0043.scaffold00157 63086 1 G C - ReadM SNP 0043.scaffold00157 63096 1 C T - ScafM SNP 0043.scaffold00157 68376 1 G A scaffold32736 ReadM SNP 0043.scaffold00157 68851 1 C A - ReadM SNP 0043.scaffold00157 68892 1 A T - ReadM INDEL 0043.scaffold00157 69076 2 .. AA - ReadM SNP 0043.scaffold00157 69108 1 A G - ScafM SNP 0043.scaffold00157 69209 1 G A scaffold32736 ReadM SNP 0043.scaffold00157 69331 1 T C - Both SNP 0043.scaffold00157 69509 1 G A scaffold32736 Both SNP 0043.scaffold00157 69562 1 T A scaffold32736 Both SNP 0043.scaffold00157 69760 1 A C scaffold32736 ScafM SNP 0043.scaffold00157 69967 1 A T scaffold32736 ScafM SNP 0043.scaffold00157 70117 1 A G scaffold32736 ScafM SNP 0043.scaffold00157 70122 1 C T scaffold32736 ScafM SNP 0043.scaffold00157 70124 1 G A scaffold32736 ScafM SNP 0043.scaffold00157 70136 1 G T scaffold32736 ScafM SNP 0043.scaffold00157 70151 1 A C scaffold32736 ScafM SNP 0043.scaffold00157 70170 1 A T scaffold32736 ScafM SNP 0043.scaffold00157 73267 1 A T scaffold23643 ScafM SNP 0043.scaffold00157 73297 1 G C scaffold23643 ScafM SNP 0043.scaffold00157 73312 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 73323 1 T C scaffold23643 ScafM INDEL 0043.scaffold00157 73327 1 . A scaffold23643 ScafM SNP 0043.scaffold00157 73330 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 73332 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 73377 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 73382 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 73469 1 G A scaffold23643 ReadM INDEL 0043.scaffold00157 74195 1 . A - Both SNP 0043.scaffold00157 74329 1 G T scaffold23643 Both SNP 0043.scaffold00157 74373 1 A T scaffold23643 Both SNP 0043.scaffold00157 74428 1 C A scaffold23643 Both SNP 0043.scaffold00157 74484 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 74556 2 TT CG scaffold23643 Both SNP 0043.scaffold00157 74617 1 A C scaffold23643 Both INDEL 0043.scaffold00157 74697 2 AA .. scaffold23643 Both SNP 0043.scaffold00157 74756 1 T A scaffold23643 Both SNP 0043.scaffold00157 74799 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 74985 1 A T scaffold23643 ScafM INDEL 0043.scaffold00157 75005 11 AAAATAGAAAA ........... scaffold23643 ScafM SNP 0043.scaffold00157 75030 1 C A scaffold23643 ScafM SNP 0043.scaffold00157 75133 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 75152 1 C T scaffold23643 ScafM INDEL 0043.scaffold00157 75156 1 A . scaffold23643 ScafM SNP 0043.scaffold00157 75159 1 A C scaffold23643 ScafM SNP 0043.scaffold00157 75186 1 C A scaffold23643 ReadM SNP 0043.scaffold00157 75357 1 A G - ReadM SNP 0043.scaffold00157 76366 1 A T - ReadM SNP 0043.scaffold00157 76388 1 C A - ReadM SNP 0043.scaffold00157 76408 1 G A - ReadM INDEL 0043.scaffold00157 76553 1 . T - ReadM INDEL 0043.scaffold00157 76609 1 A . - ReadM SNP 0043.scaffold00157 76621 1 A T - ReadM SNP 0043.scaffold00157 76630 1 A C - ReadM INDEL 0043.scaffold00157 76664 1 . A - ReadM SNP 0043.scaffold00157 76764 1 T C - ReadM SNP 0043.scaffold00157 76812 1 A C - ReadM SNP 0043.scaffold00157 76900 1 C G - ReadM SNP 0043.scaffold00157 76908 1 T G - ReadM SNP 0043.scaffold00157 76959 1 C A - ReadM SNP 0043.scaffold00157 77119 1 T C - ReadM INDEL 0043.scaffold00157 77242 1 . G - ReadM SNP 0043.scaffold00157 77292 1 A G - ReadM SNP 0043.scaffold00157 77370 1 G C - ReadM SNP 0043.scaffold00157 77388 1 G A - ReadM SNP 0043.scaffold00157 77500 1 C A - ReadM SNP 0043.scaffold00157 77603 1 G A - ReadM SNP 0043.scaffold00157 77735 1 C A - ReadM SNP 0043.scaffold00157 77737 1 T G - ReadM SNP 0043.scaffold00157 77904 1 C T - ReadM SNP 0043.scaffold00157 78011 1 T G - ReadM SNP 0043.scaffold00157 78029 1 A T - ReadM SNP 0043.scaffold00157 78165 1 G A - ReadM SNP 0043.scaffold00157 78170 1 G A - ReadM SNP 0043.scaffold00157 78277 1 G A - ReadM SNP 0043.scaffold00157 78319 1 T C - ReadM SNP 0043.scaffold00157 78569 1 A G - ReadM SNP 0043.scaffold00157 78575 1 G A - Both SNP 0043.scaffold00157 78726 1 G T scaffold23643 Both SNP 0043.scaffold00157 78778 1 A T scaffold23643 Both SNP 0043.scaffold00157 78809 1 G T scaffold23643 Both SNP 0043.scaffold00157 78910 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 78924 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 78930 1 T G scaffold23643 ScafM SNP 0043.scaffold00157 78957 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 79018 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 79045 1 C G scaffold23643 ScafM SNP 0043.scaffold00157 79060 2 AG CA scaffold23643 ScafM SNP 0043.scaffold00157 79074 1 T C scaffold23643 ScafM SNP 0043.scaffold00157 79112 1 G T scaffold23643 ScafM SNP 0043.scaffold00157 79135 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 79142 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 79158 1 T G scaffold23643 ReadM SNP 0043.scaffold00157 79224 1 T A - Both SNP 0043.scaffold00157 79364 1 A T scaffold23643 Both SNP 0043.scaffold00157 79440 1 G T scaffold23643 Both SNP 0043.scaffold00157 79455 1 C T scaffold23643 Both INDEL 0043.scaffold00157 79459 1 A . scaffold23643 Both SNP 0043.scaffold00157 79549 1 C G scaffold23643 Both SNP 0043.scaffold00157 79646 1 T G scaffold23643 Both SNP 0043.scaffold00157 79655 1 G A scaffold23643 Both SNP 0043.scaffold00157 79676 1 A C scaffold23643 ScafM SNP 0043.scaffold00157 79719 1 T A scaffold23643 ScafM INDEL 0043.scaffold00157 79750 5 ..... AAGAG scaffold23643 ReadM SNP 0043.scaffold00157 79788 1 C A - Both SNP 0043.scaffold00157 79823 1 A G scaffold23643 Both SNP 0043.scaffold00157 79900 1 G A scaffold23643 Both SNP 0043.scaffold00157 79914 1 C T scaffold23643 Both SNP 0043.scaffold00157 79964 1 C A scaffold23643 ReadM SNP 0043.scaffold00157 80069 1 G A - ReadM SNP 0043.scaffold00157 80119 1 G A - ReadM SNP 0043.scaffold00157 80320 1 C T - ReadM SNP 0043.scaffold00157 80346 1 A T - ReadM SNP 0043.scaffold00157 80374 1 C T - ReadM SNP 0043.scaffold00157 80489 1 T A - ReadM SNP 0043.scaffold00157 80495 1 A G - ScafM SNP 0043.scaffold00157 81732 1 G T scaffold23643 ScafM SNP 0043.scaffold00157 81749 1 G A scaffold23643 Both SNP 0043.scaffold00157 82181 1 A T scaffold23643 ScafM SNP 0043.scaffold00157 82203 1 G A scaffold23643 Both SNP 0043.scaffold00157 82231 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 82284 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 82287 1 C A scaffold23643 Both SNP 0043.scaffold00157 82352 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 82408 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 82440 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 82451 1 T C scaffold23643 ScafM SNP 0043.scaffold00157 82456 1 C A scaffold23643 ScafM SNP 0043.scaffold00157 82506 2 GT AC scaffold23643 Both SNP 0043.scaffold00157 82522 1 C G scaffold23643 ScafM SNP 0043.scaffold00157 82579 1 C T scaffold23643 Both SNP 0043.scaffold00157 82642 1 C T scaffold23643 Both SNP 0043.scaffold00157 82664 1 C T scaffold23643 Both SNP 0043.scaffold00157 82702 1 A G scaffold23643 Both SNP 0043.scaffold00157 82931 1 T C scaffold23643 ReadM SNP 0043.scaffold00157 82950 1 T G - ReadM SNP 0043.scaffold00157 82972 1 A C - ReadM SNP 0043.scaffold00157 83048 1 G A - ReadM SNP 0043.scaffold00157 83052 1 G C - ReadM SNP 0043.scaffold00157 83070 1 G A - ReadM SNP 0043.scaffold00157 87764 1 A C - ReadM INDEL 0043.scaffold00157 87812 1 . G - ReadM SNP 0043.scaffold00157 87871 1 T C - ReadM SNP 0043.scaffold00157 87877 1 A G - ReadM SNP 0043.scaffold00157 87970 1 C A - ReadM SNP 0043.scaffold00157 88025 1 A G - ReadM SNP 0043.scaffold00157 88041 1 T G - ReadM SNP 0043.scaffold00157 88090 1 A C - ReadM SNP 0043.scaffold00157 88212 1 A G - ReadM INDEL 0043.scaffold00157 88333 1 C . - ReadM SNP 0043.scaffold00157 88377 1 T C - ReadM SNP 0043.scaffold00157 88386 1 C T - ReadM SNP 0043.scaffold00157 89100 1 C T - ReadM SNP 0043.scaffold00157 89245 1 C T - ReadM SNP 0043.scaffold00157 89362 1 C A - ReadM INDEL 0043.scaffold00157 89400 1 G . - ReadM SNP 0043.scaffold00157 89419 1 G T - ReadM SNP 0043.scaffold00157 89424 1 G C - ReadM SNP 0043.scaffold00157 89715 1 C T - ReadM SNP 0043.scaffold00157 89727 1 A T - ReadM SNP 0043.scaffold00157 89768 1 C G - ReadM SNP 0043.scaffold00157 89880 1 G A - ReadM SNP 0043.scaffold00157 89910 1 C T - ReadM SNP 0043.scaffold00157 89979 1 G A - ReadM SNP 0043.scaffold00157 90021 1 A G - ReadM SNP 0043.scaffold00157 90071 1 C A - ReadM SNP 0043.scaffold00157 90078 1 G A - ReadM SNP 0043.scaffold00157 90155 1 A G - ReadM SNP 0043.scaffold00157 90162 1 T A - ReadM SNP 0043.scaffold00157 90358 1 T G - ReadM SNP 0043.scaffold00157 90364 1 G A - ReadM SNP 0043.scaffold00157 90435 1 C T - ReadM SNP 0043.scaffold00157 90518 1 A T - ReadM SNP 0043.scaffold00157 90528 1 A G - ReadM SNP 0043.scaffold00157 90544 1 T C - Both SNP 0043.scaffold00157 90625 1 T C scaffold23643 Both SNP 0043.scaffold00157 90659 1 G A scaffold23643 ReadM SNP 0043.scaffold00157 90664 1 G C - ReadM SNP 0043.scaffold00157 90698 1 C T - ReadM SNP 0043.scaffold00157 90716 1 T C - ReadM SNP 0043.scaffold00157 90874 1 A G - ReadM SNP 0043.scaffold00157 90880 1 G T - ReadM SNP 0043.scaffold00157 90956 1 T C - ReadM SNP 0043.scaffold00157 91041 1 G A - ReadM SNP 0043.scaffold00157 91166 1 A G - ReadM SNP 0043.scaffold00157 91210 1 A G - ReadM SNP 0043.scaffold00157 91230 1 C T - ReadM SNP 0043.scaffold00157 91259 1 T C - ReadM SNP 0043.scaffold00157 91295 1 A T - Both SNP 0043.scaffold00157 91354 1 G T scaffold23643 Both SNP 0043.scaffold00157 91362 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 91419 1 A C scaffold23643 ScafM SNP 0043.scaffold00157 91421 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 91425 1 T A scaffold23643 Both SNP 0043.scaffold00157 91452 1 G T scaffold23643 Both SNP 0043.scaffold00157 91487 1 T C scaffold23643 ScafM INDEL 0043.scaffold00157 91618 3 ... GAT scaffold23643 ScafM SNP 0043.scaffold00157 91648 2 TT CC scaffold23643 Both SNP 0043.scaffold00157 91662 1 C G scaffold23643 ReadM SNP 0043.scaffold00157 91775 1 G A - ReadM SNP 0043.scaffold00157 91785 1 G A - ReadM SNP 0043.scaffold00157 91869 1 T C - ReadM SNP 0043.scaffold00157 91993 1 G C - ReadM SNP 0043.scaffold00157 92107 1 G A - Both SNP 0043.scaffold00157 92238 1 C T scaffold23643 Both SNP 0043.scaffold00157 92324 1 C A scaffold23643 Both SNP 0043.scaffold00157 92341 1 A G scaffold23643 Both SNP 0043.scaffold00157 92465 1 A G scaffold23643 Both SNP 0043.scaffold00157 92580 1 G A scaffold23643 ScafM INDEL 0043.scaffold00157 92718 1 . G scaffold23643 ScafM SNP 0043.scaffold00157 92721 1 T G scaffold23643 ScafM SNP 0043.scaffold00157 92746 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 92763 1 A T scaffold23643 ScafM SNP 0043.scaffold00157 92765 1 A T scaffold23643 Both SNP 0043.scaffold00157 92799 1 T A scaffold23643 ScafM SNP 0043.scaffold00157 92825 1 T G scaffold23643 Both SNP 0043.scaffold00157 93007 1 T G scaffold23643 Both SNP 0043.scaffold00157 93012 1 G C scaffold23643 Both SNP 0043.scaffold00157 93088 1 A G scaffold23643 ScafM INDEL 0043.scaffold00157 93108 23 ....................... TCAACCTGGATGCTTCCAATTTT scaffold23643 ScafM SNP 0043.scaffold00157 93117 1 C T scaffold23643 Both SNP 0043.scaffold00157 93135 1 C T scaffold23643 Both SNP 0043.scaffold00157 93192 1 A T scaffold23643 Both SNP 0043.scaffold00157 93220 1 G A scaffold23643 Both SNP 0043.scaffold00157 93245 1 G T scaffold23643 Both SNP 0043.scaffold00157 93330 1 G A scaffold23643 ScafM INDEL 0043.scaffold00157 93346 4 TTTT .... scaffold23643 ScafM INDEL 0043.scaffold00157 93351 1 T . scaffold23643 ScafM SNP 0043.scaffold00157 93358 1 T G scaffold23643 Both SNP 0043.scaffold00157 93409 1 T A scaffold23643 Both SNP 0043.scaffold00157 93426 1 C T scaffold23643 Both SNP 0043.scaffold00157 93454 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 93472 2 CC TT scaffold23643 ScafM SNP 0043.scaffold00157 93483 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 93487 1 C G scaffold23643 Both SNP 0043.scaffold00157 93517 1 G C scaffold23643 ScafM SNP 0043.scaffold00157 93596 1 C T scaffold23643 ScafM SNP 0043.scaffold00157 93601 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 93624 1 C T scaffold23643 ScafM INDEL 0043.scaffold00157 93680 2 AC .. scaffold23643 ScafM INDEL 0043.scaffold00157 93703 2 .. TA scaffold23643 ReadM INDEL 0043.scaffold00157 94073 1 A . - ReadM SNP 0043.scaffold00157 94091 1 A T - ReadM SNP 0043.scaffold00157 94169 1 T A - ReadM SNP 0043.scaffold00157 94191 1 A T - ReadM SNP 0043.scaffold00157 94314 1 G A - ReadM SNP 0043.scaffold00157 94433 1 A G - ReadM SNP 0043.scaffold00157 94456 1 C T - ReadM SNP 0043.scaffold00157 94489 1 T A - ReadM INDEL 0043.scaffold00157 94568 1 . A - ScafM INDEL 0043.scaffold00157 94568 3 .TT AAA scaffold23643 Both SNP 0043.scaffold00157 94703 1 A G scaffold23643 ReadM SNP 0043.scaffold00157 94749 1 G A - ReadM SNP 0043.scaffold00157 94770 1 G C - ScafM INDEL 0043.scaffold00157 94901 1 A . scaffold23643 ScafM SNP 0043.scaffold00157 94923 1 T C scaffold23643 ScafM INDEL 0043.scaffold00157 94931 3 GCA ... scaffold23643 ScafM SNP 0043.scaffold00157 94944 1 A C scaffold23643 Both SNP 0043.scaffold00157 94963 1 A G scaffold23643 Both SNP 0043.scaffold00157 95014 1 A C scaffold23643 Both SNP 0043.scaffold00157 95073 1 A C scaffold23643 ScafM INDEL 0043.scaffold00157 95098 1 . T scaffold23643 ScafM INDEL 0043.scaffold00157 95118 2 AA .T scaffold23643 Both SNP 0043.scaffold00157 95177 1 C T scaffold23643 ReadM SNP 0043.scaffold00157 95325 1 G A - ReadM INDEL 0043.scaffold00157 95333 1 A . - Both SNP 0043.scaffold00157 95480 1 A G scaffold23643 Both INDEL 0043.scaffold00157 95600 1 A . scaffold23643 Both SNP 0043.scaffold00157 95660 1 A C scaffold23643 ScafM SNP 0043.scaffold00157 95693 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 95754 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 95772 1 G A scaffold23643 Both SNP 0043.scaffold00157 95833 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 95847 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 96111 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 96168 1 T C scaffold23643 ScafM SNP 0043.scaffold00157 96207 1 T G scaffold23643 Both SNP 0043.scaffold00157 107320 1 A C scaffold23643 Both INDEL 0043.scaffold00157 107523 1 T . scaffold23643 Both INDEL 0043.scaffold00157 107603 1 T . scaffold23643 ScafM SNP 0043.scaffold00157 107606 1 T A scaffold23643 Both SNP 0043.scaffold00157 107688 1 C T scaffold23643 Both SNP 0043.scaffold00157 107693 1 G T scaffold23643 Both SNP 0043.scaffold00157 107756 1 T A scaffold23643 ScafM INDEL 0043.scaffold00157 107820 5 TTAAT ..... scaffold23643 ScafM SNP 0043.scaffold00157 107871 1 C G scaffold23643 ReadM SNP 0043.scaffold00157 108011 1 T C - Both SNP 0043.scaffold00157 108128 1 A G scaffold23643 Both SNP 0043.scaffold00157 108171 1 G T scaffold23643 ScafM SNP 0043.scaffold00157 108291 1 G A scaffold23643 ScafM SNP 0043.scaffold00157 108303 1 T C scaffold23643 ScafM SNP 0043.scaffold00157 108308 1 A G scaffold23643 ScafM SNP 0043.scaffold00157 108325 1 C G scaffold23643 ScafM SNP 0043.scaffold00157 108332 1 A T scaffold23643 Both SNP 0043.scaffold00157 108381 1 G T scaffold23643 ReadM SNP 0043.scaffold00157 108415 1 G C - ReadM SNP 0043.scaffold00157 108646 1 C T - ReadM SNP 0043.scaffold00157 108652 1 G A - ReadM SNP 0043.scaffold00157 108659 1 T C - Both INDEL 0043.scaffold00157 108783 1 T . scaffold23643 Both SNP 0043.scaffold00157 108801 1 A C scaffold23643 ReadM SNP 0043.scaffold00157 108900 1 A G - ReadM SNP 0043.scaffold00157 108914 1 G T - ScafM SNP 0043.scaffold00157 108972 1 C T scaffold23643 ReadM SNP 0043.scaffold00157 109577 1 T C - Both SNP 0043.scaffold00157 109906 1 G A scaffold10365 Both SNP 0043.scaffold00157 109976 1 C T scaffold10365 Both SNP 0043.scaffold00157 109994 1 C G scaffold10365 Both SNP 0043.scaffold00157 110031 1 T C scaffold10365 ReadM SNP 0043.scaffold00157 110172 1 T C - ReadM SNP 0043.scaffold00157 110177 1 T C - ReadM SNP 0043.scaffold00157 110224 1 T G - ReadM SNP 0043.scaffold00157 110497 1 T C - ReadM SNP 0043.scaffold00157 110506 1 T G - ReadM SNP 0043.scaffold00157 110574 1 T C - ReadM SNP 0043.scaffold00157 111244 1 G C - ReadM SNP 0043.scaffold00157 111293 1 G T - ReadM SNP 0043.scaffold00157 111301 1 A G - ReadM SNP 0043.scaffold00157 111354 1 C T - ReadM SNP 0043.scaffold00157 111402 1 T G - ReadM SNP 0043.scaffold00157 111435 1 G A - ReadM SNP 0043.scaffold00157 111438 1 G A - ReadM SNP 0043.scaffold00157 111529 1 T C - ReadM SNP 0043.scaffold00157 111715 1 C T - ReadM SNP 0043.scaffold00157 111776 1 A C - ReadM SNP 0043.scaffold00157 112126 1 T C - ReadM SNP 0043.scaffold00157 112238 1 C T - ReadM SNP 0043.scaffold00157 112519 1 T A - ReadM SNP 0043.scaffold00157 112561 1 T G - ReadM SNP 0043.scaffold00157 112716 1 A G - ReadM SNP 0043.scaffold00157 112727 1 A G - ReadM SNP 0043.scaffold00157 112863 1 A G - ReadM SNP 0043.scaffold00157 112904 1 G A - ReadM SNP 0043.scaffold00157 112910 1 T C - ReadM SNP 0043.scaffold00157 112948 1 G C - ReadM SNP 0043.scaffold00157 113062 1 T C - ReadM SNP 0043.scaffold00157 113272 1 G T - ReadM SNP 0043.scaffold00157 113320 1 G A - ReadM SNP 0043.scaffold00157 113413 1 A G - ReadM SNP 0043.scaffold00157 113485 1 A G - ReadM SNP 0043.scaffold00157 113527 1 T A - ReadM SNP 0043.scaffold00157 113546 1 T C - ReadM SNP 0043.scaffold00157 113640 1 C G - ReadM SNP 0043.scaffold00157 113647 1 A G - ReadM SNP 0043.scaffold00157 113666 1 T G - ReadM SNP 0043.scaffold00157 113691 1 T C - ReadM SNP 0043.scaffold00157 113791 1 G C - ReadM SNP 0043.scaffold00157 113976 1 G A - ReadM SNP 0043.scaffold00157 114056 1 C T - ReadM SNP 0043.scaffold00157 114063 1 C T - ReadM SNP 0043.scaffold00157 114085 1 C A - ReadM SNP 0043.scaffold00157 114142 1 A G - ReadM SNP 0043.scaffold00157 114520 1 G A - ReadM SNP 0043.scaffold00157 114570 1 C T - ReadM SNP 0043.scaffold00157 114623 1 T G - ReadM SNP 0043.scaffold00157 114645 1 A G - ReadM SNP 0043.scaffold00157 114687 1 G A - ReadM SNP 0043.scaffold00157 114767 1 C T - ReadM SNP 0043.scaffold00157 114791 1 G A - ReadM SNP 0043.scaffold00157 114807 1 T C - ReadM SNP 0043.scaffold00157 114820 1 G A - ReadM SNP 0043.scaffold00157 114880 1 G C - ReadM SNP 0043.scaffold00157 114947 1 C A - ReadM SNP 0043.scaffold00157 114988 2 GG TA - ReadM SNP 0043.scaffold00157 115265 1 A G - ReadM SNP 0043.scaffold00157 115352 1 T C - ReadM SNP 0043.scaffold00157 115399 1 C A - ReadM SNP 0043.scaffold00157 115464 1 G A - ReadM INDEL 0043.scaffold00157 115682 1 C . - ReadM SNP 0043.scaffold00157 115740 1 T C - ReadM SNP 0043.scaffold00157 115853 1 A G - ReadM SNP 0043.scaffold00157 115953 1 C G - ReadM SNP 0043.scaffold00157 116168 1 T C - ReadM SNP 0043.scaffold00157 116186 1 T A - ReadM SNP 0043.scaffold00157 116249 1 T C - ReadM SNP 0043.scaffold00157 116251 1 G A - ReadM SNP 0043.scaffold00157 116315 1 G A - ReadM SNP 0043.scaffold00157 116328 1 G A - ReadM INDEL 0043.scaffold00157 116447 1 . A - ReadM SNP 0043.scaffold00157 116605 1 A T - ReadM SNP 0043.scaffold00157 116680 1 T G - ReadM SNP 0043.scaffold00157 116782 1 C T - ReadM SNP 0043.scaffold00157 116798 1 C T - ReadM SNP 0043.scaffold00157 116896 1 C A - ReadM SNP 0043.scaffold00157 116914 1 C T - ReadM SNP 0043.scaffold00157 116919 1 A T - ReadM SNP 0043.scaffold00157 117100 1 A G - ReadM SNP 0043.scaffold00157 117116 1 T C - ReadM SNP 0043.scaffold00157 117362 1 C T - ReadM SNP 0043.scaffold00157 117392 1 G C - ReadM SNP 0043.scaffold00157 117481 1 T G - ReadM SNP 0043.scaffold00157 117493 1 C T - ReadM SNP 0043.scaffold00157 117660 1 A G - ReadM SNP 0043.scaffold00157 117874 1 A G - ReadM SNP 0043.scaffold00157 117890 1 T C - ReadM SNP 0043.scaffold00157 117945 1 C G - ReadM SNP 0043.scaffold00157 118042 1 C T - ReadM SNP 0043.scaffold00157 118062 1 C T - ReadM SNP 0043.scaffold00157 118111 1 G T - ReadM SNP 0043.scaffold00157 118140 1 T C - ReadM SNP 0043.scaffold00157 118210 1 C T - ReadM SNP 0043.scaffold00157 118323 1 A T - ReadM SNP 0043.scaffold00157 118391 1 T A - ReadM SNP 0043.scaffold00157 118518 1 C T - ReadM SNP 0043.scaffold00157 118583 1 A G - ReadM SNP 0043.scaffold00157 118587 1 G A - ReadM SNP 0043.scaffold00157 118618 1 T C - ReadM SNP 0043.scaffold00157 118650 1 T C - ReadM SNP 0043.scaffold00157 118691 1 G T - ReadM SNP 0043.scaffold00157 118815 1 A T - ReadM SNP 0043.scaffold00157 118823 1 A G - ReadM SNP 0043.scaffold00157 118867 1 C T - ReadM SNP 0043.scaffold00157 118956 1 T C - ReadM SNP 0043.scaffold00157 119029 1 G T - ReadM SNP 0043.scaffold00157 119077 1 G A - ReadM SNP 0043.scaffold00157 119158 1 G A - ReadM SNP 0043.scaffold00157 119200 1 C G - ReadM SNP 0043.scaffold00157 119229 1 A G - ReadM SNP 0043.scaffold00157 119244 1 C T - ReadM SNP 0043.scaffold00157 119337 1 A G - ReadM SNP 0043.scaffold00157 119342 1 G A - ReadM SNP 0043.scaffold00157 119374 1 A G - ReadM SNP 0043.scaffold00157 119512 1 G A - ReadM SNP 0043.scaffold00157 119650 1 A G - ReadM SNP 0043.scaffold00157 119894 1 A T - ReadM SNP 0043.scaffold00157 119950 1 A G - ReadM SNP 0043.scaffold00157 119952 1 T C - ReadM SNP 0043.scaffold00157 119978 1 T C - ReadM SNP 0043.scaffold00157 120020 1 A G - ReadM SNP 0043.scaffold00157 120466 1 A C - ReadM SNP 0043.scaffold00157 120662 1 T C - ReadM SNP 0043.scaffold00157 120670 1 A G - ReadM SNP 0043.scaffold00157 120737 1 G C - ReadM SNP 0043.scaffold00157 120815 1 G C - ReadM SNP 0043.scaffold00157 120849 1 G T - ReadM SNP 0043.scaffold00157 121014 1 A G - ReadM SNP 0043.scaffold00157 121044 1 T G - ReadM SNP 0043.scaffold00157 121109 1 T C - ReadM SNP 0043.scaffold00157 121140 1 G A - ReadM INDEL 0043.scaffold00157 121178 1 . T - ReadM SNP 0043.scaffold00157 121213 1 G A - ReadM SNP 0043.scaffold00157 121226 1 C A - ReadM SNP 0043.scaffold00157 121246 1 G A - ReadM SNP 0043.scaffold00157 121336 1 G C - Both SNP 0043.scaffold00157 121476 1 T C scaffold10365 Both SNP 0043.scaffold00157 121596 1 T C scaffold10365 Both SNP 0043.scaffold00157 121648 1 G C scaffold10365 Both SNP 0043.scaffold00157 121711 1 A G scaffold10365 Both INDEL 0043.scaffold00157 121887 1 A . scaffold10365 Both SNP 0043.scaffold00157 121910 1 C T scaffold10365 Both SNP 0043.scaffold00157 122175 1 G T scaffold10365 ReadM SNP 0043.scaffold00157 122306 1 A C - ReadM INDEL 0043.scaffold00157 122347 1 G . - ScafM SNP 0043.scaffold00157 122519 1 A G scaffold10365 ReadM INDEL 0043.scaffold00157 122587 2 TA .. - ReadM SNP 0043.scaffold00157 122691 1 A G - ReadM INDEL 0043.scaffold00157 122722 1 . A - ReadM SNP 0043.scaffold00157 122800 1 C T - ReadM SNP 0043.scaffold00157 122804 1 G A - ReadM SNP 0043.scaffold00157 122854 1 T G - ReadM SNP 0043.scaffold00157 122922 1 G A - ReadM SNP 0043.scaffold00157 122956 1 A G - ScafM SNP 0043.scaffold00157 122974 1 T C scaffold10365 Both SNP 0043.scaffold00157 123040 1 G A scaffold10365 ReadM SNP 0043.scaffold00157 123090 1 A G - ReadM SNP 0043.scaffold00157 123128 1 A G - Both SNP 0043.scaffold00157 123220 1 G A scaffold10365 Both SNP 0043.scaffold00157 123235 1 G C scaffold10365 ScafM SNP 0043.scaffold00157 123274 1 T C scaffold10365 ScafM SNP 0043.scaffold00157 123278 1 T C scaffold10365 Both SNP 0043.scaffold00157 123305 1 T C scaffold10365 ReadM SNP 0043.scaffold00157 123435 1 T C - ReadM SNP 0043.scaffold00157 123472 1 T C - ReadM SNP 0043.scaffold00157 123519 1 A T - ReadM INDEL 0043.scaffold00157 123520 1 . T - ReadM SNP 0043.scaffold00157 123738 1 T G - ReadM INDEL 0043.scaffold00157 123921 1 T . - ScafM SNP 0043.scaffold00157 124061 1 A G scaffold10365 ScafM SNP 0043.scaffold00157 124064 1 A G scaffold10365 ScafM SNP 0043.scaffold00157 124074 1 C T scaffold10365 ScafM SNP 0043.scaffold00157 124903 1 G A scaffold10365 ScafM SNP 0043.scaffold00157 124948 1 T C scaffold10365 ScafM SNP 0043.scaffold00157 124967 1 A G scaffold10365 ScafM SNP 0043.scaffold00157 124992 1 T C scaffold10365 ScafM SNP 0043.scaffold00157 125013 1 G A scaffold10365 ScafM INDEL 0043.scaffold00157 125029 4 AAGT .... scaffold10365 ScafM SNP 0043.scaffold00157 125042 1 G A scaffold10365 ReadM SNP 0043.scaffold00157 125241 1 A C - ReadM SNP 0043.scaffold00157 125259 1 G A - ReadM SNP 0043.scaffold00157 125290 1 G T - ReadM SNP 0043.scaffold00157 125415 1 G A - ReadM SNP 0043.scaffold00157 125518 1 G T - ReadM INDEL 0043.scaffold00157 125564 1 A . - ReadM SNP 0043.scaffold00157 125758 1 G A - ReadM SNP 0043.scaffold00157 125797 1 T C - ReadM SNP 0043.scaffold00157 125898 1 C T - ReadM SNP 0043.scaffold00157 125914 1 A G - ReadM SNP 0043.scaffold00157 125941 1 C G - ReadM SNP 0043.scaffold00157 126045 1 A C - ReadM SNP 0043.scaffold00157 126059 1 T G - ReadM SNP 0043.scaffold00157 126077 1 C A - ReadM SNP 0043.scaffold00157 126111 2 AC TG - ReadM SNP 0043.scaffold00157 126160 1 T A - ReadM SNP 0043.scaffold00157 126214 1 T G - ReadM SNP 0043.scaffold00157 126465 1 G A - ReadM SNP 0043.scaffold00157 126473 1 G A - ReadM SNP 0043.scaffold00157 126488 1 G A - ReadM SNP 0043.scaffold00157 126598 1 C T - ReadM SNP 0043.scaffold00157 126600 1 A G - ReadM SNP 0043.scaffold00157 126676 1 C T - ReadM SNP 0043.scaffold00157 126730 1 T C - ReadM SNP 0043.scaffold00157 126765 1 A T - ReadM SNP 0043.scaffold00157 126862 1 A G - ReadM SNP 0043.scaffold00157 126897 2 AT GG - ReadM SNP 0043.scaffold00157 126928 1 A C - ReadM SNP 0043.scaffold00157 126933 1 A G - ReadM SNP 0043.scaffold00157 127041 1 C G - ReadM SNP 0043.scaffold00157 127065 1 A C - ReadM INDEL 0043.scaffold00157 127195 1 . G - ReadM SNP 0043.scaffold00157 127250 1 T C - ReadM SNP 0043.scaffold00157 127344 1 T G - ReadM SNP 0043.scaffold00157 127527 1 T G - ReadM SNP 0043.scaffold00157 127679 1 T G - ReadM SNP 0043.scaffold00157 127737 1 G A - ReadM SNP 0043.scaffold00157 127783 1 T C - ReadM SNP 0043.scaffold00157 127823 1 G C - ReadM SNP 0043.scaffold00157 127827 1 C T - ReadM SNP 0043.scaffold00157 127858 1 C T - Both SNP 0043.scaffold00157 128011 1 A G scaffold10365 Both SNP 0043.scaffold00157 128047 1 T C scaffold10365 Both SNP 0043.scaffold00157 128075 1 G A scaffold10365 Both INDEL 0043.scaffold00157 128082 1 T . scaffold10365 ScafM SNP 0043.scaffold00157 128157 1 C A scaffold10365 ReadM SNP 0043.scaffold00157 128212 1 T C - ReadM SNP 0043.scaffold00157 128520 1 T C - ScafM INDEL 0043.scaffold00157 128894 6 ...... CCCTCC scaffold10365 ScafM SNP 0043.scaffold00157 128970 1 A G scaffold10365 ScafM SNP 0043.scaffold00157 128983 1 C T scaffold10365 ScafM SNP 0043.scaffold00157 128985 1 A C scaffold10365 ScafM SNP 0043.scaffold00157 129015 1 A G scaffold10365 ScafM INDEL 0043.scaffold00157 129095 1 . A scaffold10365 ScafM SNP 0043.scaffold00157 129101 1 T G scaffold10365 ScafM SNP 0043.scaffold00157 129107 1 C G scaffold10365 ScafM SNP 0043.scaffold00157 129237 1 G A scaffold10365 ReadM SNP 0043.scaffold00157 129964 1 C T - ReadM SNP 0043.scaffold00157 130395 1 C T - ReadM SNP 0043.scaffold00157 131101 1 C T - ReadM SNP 0043.scaffold00157 131148 1 A C - Both SNP 0043.scaffold00157 132281 1 C T scaffold10365 ReadM SNP 0043.scaffold00157 132357 1 G A - ScafM SNP 0043.scaffold00157 132397 1 C T scaffold10365 ScafM SNP 0043.scaffold00157 132413 1 G A scaffold10365 ScafM SNP 0043.scaffold00157 132416 2 AT CC scaffold10365 Both SNP 0043.scaffold00157 132471 1 C G scaffold10365 ScafM SNP 0043.scaffold00157 132554 1 C G scaffold10365 ReadM SNP 0043.scaffold00157 133227 1 A G - ReadM SNP 0043.scaffold00157 133264 1 A T - ReadM SNP 0043.scaffold00157 133319 1 T G - ReadM SNP 0043.scaffold00157 133368 1 A G - ReadM INDEL 0043.scaffold00157 133473 1 C . - ReadM SNP 0043.scaffold00157 133619 1 A G - ReadM SNP 0043.scaffold00157 133624 1 G A - ReadM SNP 0043.scaffold00157 135239 1 C A - ReadM SNP 0043.scaffold00157 135409 1 G A - ReadM SNP 0043.scaffold00157 135464 1 A C - ReadM SNP 0043.scaffold00157 135517 1 G A - ReadM SNP 0043.scaffold00157 135532 1 G A - ReadM SNP 0043.scaffold00157 135581 1 T C - ReadM SNP 0043.scaffold00157 135859 1 C T - ReadM SNP 0043.scaffold00157 135968 1 G A - ReadM SNP 0043.scaffold00157 135991 1 G A - ReadM SNP 0043.scaffold00157 136029 1 T G - ReadM SNP 0043.scaffold00157 136105 1 G A - ReadM SNP 0043.scaffold00157 136163 1 A G - ReadM SNP 0043.scaffold00157 136217 1 G T - ReadM SNP 0043.scaffold00157 136292 1 C T - ReadM SNP 0043.scaffold00157 136294 1 A G - ReadM INDEL 0043.scaffold00157 136315 1 . A - Both SNP 0043.scaffold00157 136394 1 A G scaffold38394 ReadM INDEL 0043.scaffold00157 136456 1 A . - ReadM SNP 0043.scaffold00157 136469 1 T A - ReadM SNP 0043.scaffold00157 136539 1 C T - ReadM SNP 0043.scaffold00157 136794 1 T A - ReadM SNP 0043.scaffold00157 136997 1 G T - ScafM SNP 0043.scaffold00157 137044 1 A G scaffold38394 ScafM INDEL 0043.scaffold00157 137058 1 . C scaffold38394 ScafM SNP 0043.scaffold00157 137071 1 A G scaffold38394 ScafM INDEL 0043.scaffold00157 137073 2 .. CT scaffold38394 Both SNP 0043.scaffold00157 137128 1 C T scaffold38394 ScafM INDEL 0043.scaffold00157 137201 7 ....... TGATATA scaffold38394 ScafM SNP 0043.scaffold00157 137323 1 G A scaffold38394 ScafM SNP 0043.scaffold00157 137775 1 G A scaffold38394 ScafM SNP 0043.scaffold00157 137784 1 T G scaffold38394 ScafM SNP 0043.scaffold00157 137813 1 G A scaffold38394 ScafM SNP 0043.scaffold00157 137825 1 C T scaffold38394 ScafM SNP 0043.scaffold00157 137936 1 C T scaffold38394 ScafM INDEL 0043.scaffold00157 137943 1 . A scaffold38394 ScafM SNP 0043.scaffold00157 137952 1 G A scaffold38394 ScafM SNP 0043.scaffold00157 138950 1 A T scaffold37703 ScafM SNP 0043.scaffold00157 139091 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 139234 1 A T scaffold37703 ScafM SNP 0043.scaffold00157 139397 1 T G scaffold37703 ScafM SNP 0043.scaffold00157 139423 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 139450 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 140312 1 G A scaffold40607 ScafM SNP 0043.scaffold00157 140319 1 T A scaffold40607 ScafM INDEL 0043.scaffold00157 140330 2 .. TT scaffold40607 ScafM INDEL 0043.scaffold00157 140526 1 . A scaffold40607 Both SNP 0043.scaffold00157 140764 1 C A scaffold40607 ScafM INDEL 0043.scaffold00157 140830 2 .. CA scaffold40607 ScafM SNP 0043.scaffold00157 140833 1 C G scaffold40607 ScafM SNP 0043.scaffold00157 140864 1 C T scaffold40607 ScafM SNP 0043.scaffold00157 140867 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 140869 1 C A scaffold40607 ScafM INDEL 0043.scaffold00157 140903 5 TTAAT ..... scaffold40607 ScafM SNP 0043.scaffold00157 140924 1 G T scaffold40607 ScafM SNP 0043.scaffold00157 140930 1 A G scaffold40607 ScafM SNP 0043.scaffold00157 140934 1 G T scaffold40607 ScafM SNP 0043.scaffold00157 140937 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 140962 1 A C scaffold40607 ScafM SNP 0043.scaffold00157 140965 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 140980 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 141002 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 141005 1 C G scaffold40607 ScafM SNP 0043.scaffold00157 141023 1 G A scaffold40607 ScafM SNP 0043.scaffold00157 141031 1 A G scaffold40607 ScafM SNP 0043.scaffold00157 141035 1 C T scaffold40607 ScafM SNP 0043.scaffold00157 141054 2 TT CC scaffold40607 ScafM SNP 0043.scaffold00157 141083 1 G A scaffold40607 ScafM SNP 0043.scaffold00157 141093 1 T C scaffold40607 ScafM SNP 0043.scaffold00157 141097 1 C G scaffold40607 ScafM SNP 0043.scaffold00157 141120 1 A T scaffold40607 ScafM SNP 0043.scaffold00157 141125 1 A T scaffold40607 ScafM INDEL 0043.scaffold00157 141260 2 .. TG scaffold37703 ScafM SNP 0043.scaffold00157 141295 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 141366 1 T C scaffold37703 ScafM INDEL 0043.scaffold00157 141372 1 . T scaffold37703 ScafM SNP 0043.scaffold00157 141375 1 A G scaffold37703 ScafM SNP 0043.scaffold00157 141406 1 C A scaffold37703 ScafM SNP 0043.scaffold00157 141425 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 141460 1 T G scaffold37703 ScafM INDEL 0043.scaffold00157 141491 1 . C scaffold37703 ScafM SNP 0043.scaffold00157 141493 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 141506 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 141665 1 G A scaffold37703 Both SNP 0043.scaffold00157 142021 1 G C scaffold37703 Both SNP 0043.scaffold00157 142073 1 A T scaffold37703 Both SNP 0043.scaffold00157 142241 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 142269 1 A C scaffold37703 ScafM SNP 0043.scaffold00157 142273 1 A T scaffold37703 ScafM SNP 0043.scaffold00157 142299 1 A G scaffold37703 ScafM SNP 0043.scaffold00157 142301 1 T A scaffold37703 ScafM SNP 0043.scaffold00157 142309 1 C T scaffold37703 ReadM SNP 0043.scaffold00157 142400 1 C A - ReadM SNP 0043.scaffold00157 142419 1 C T - ScafM SNP 0043.scaffold00157 142437 1 G A scaffold37703 ScafM SNP 0043.scaffold00157 142446 1 G A scaffold37703 ScafM INDEL 0043.scaffold00157 142468 1 . A scaffold37703 ScafM SNP 0043.scaffold00157 142487 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 142489 1 A G scaffold37703 Both SNP 0043.scaffold00157 142548 1 C T scaffold37703 Both SNP 0043.scaffold00157 142566 1 T G scaffold37703 ScafM INDEL 0043.scaffold00157 142970 1 T . scaffold37703 Both SNP 0043.scaffold00157 143055 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 143108 1 A T scaffold37703 ScafM SNP 0043.scaffold00157 143112 1 C A scaffold37703 ScafM SNP 0043.scaffold00157 143159 1 G A scaffold37703 ScafM INDEL 0043.scaffold00157 143268 2 GA .C scaffold37703 Both SNP 0043.scaffold00157 143352 1 A G scaffold37703 Both SNP 0043.scaffold00157 143364 1 G A scaffold37703 Both SNP 0043.scaffold00157 143387 1 G T scaffold37703 ScafM SNP 0043.scaffold00157 143514 1 T C scaffold37703 ScafM INDEL 0043.scaffold00157 143534 4 .... TAAT scaffold37703 ScafM INDEL 0043.scaffold00157 143536 2 .G CA scaffold37703 ScafM SNP 0043.scaffold00157 143663 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 143680 2 AA CT scaffold37703 ScafM SNP 0043.scaffold00157 143688 1 A G scaffold37703 ScafM SNP 0043.scaffold00157 143846 1 T G scaffold37703 ScafM INDEL 0043.scaffold00157 143868 1 T . scaffold37703 ScafM SNP 0043.scaffold00157 143913 2 TC CT scaffold37703 ScafM INDEL 0043.scaffold00157 143931 2 .. TG scaffold37703 ScafM SNP 0043.scaffold00157 143933 1 G A scaffold37703 ScafM SNP 0043.scaffold00157 143961 2 TA GG scaffold37703 ScafM SNP 0043.scaffold00157 143964 1 C T scaffold37703 ScafM INDEL 0043.scaffold00157 143968 1 T . scaffold37703 ScafM SNP 0043.scaffold00157 143985 1 G T scaffold37703 ScafM SNP 0043.scaffold00157 143991 1 T A scaffold37703 ScafM SNP 0043.scaffold00157 144042 1 T G scaffold37703 ScafM INDEL 0043.scaffold00157 144188 2 .. TA scaffold37703 ScafM SNP 0043.scaffold00157 144198 1 A T scaffold37703 ScafM INDEL 0043.scaffold00157 144936 1 T . scaffold37703 Both SNP 0043.scaffold00157 144995 1 C T scaffold37703 ScafM SNP 0043.scaffold00157 145046 1 T A scaffold37703 Both SNP 0043.scaffold00157 145216 1 G A scaffold37703 ScafM SNP 0043.scaffold00157 145253 2 AG CA scaffold37703 ScafM SNP 0043.scaffold00157 145299 1 A G scaffold37703 ScafM INDEL 0043.scaffold00157 145320 1 T . scaffold37703 ScafM INDEL 0043.scaffold00157 145346 3 ... TAT scaffold37703 ScafM SNP 0043.scaffold00157 145378 2 AG TA scaffold37703 ScafM INDEL 0043.scaffold00157 145388 7 TGTATAA ....... scaffold37703 ScafM SNP 0043.scaffold00157 145397 1 A G scaffold37703 ScafM INDEL 0043.scaffold00157 145399 1 T . scaffold37703 ScafM SNP 0043.scaffold00157 145406 1 T C scaffold37703 ScafM SNP 0043.scaffold00157 145431 1 G C scaffold37703 ScafM SNP 0043.scaffold00157 145469 1 A T scaffold37703 ScafM SNP 0043.scaffold00157 145499 1 T A scaffold37703 ReadM SNP 0043.scaffold00157 145628 1 G C - ReadM SNP 0043.scaffold00157 145711 1 A G - ReadM SNP 0043.scaffold00157 152124 1 T C - ReadM SNP 0043.scaffold00157 152336 1 A G - ReadM INDEL 0043.scaffold00157 153419 1 A . - ReadM SNP 0043.scaffold00157 153435 1 G A - ScafM SNP 0043.scaffold00157 155896 1 T C scaffold26547 ScafM SNP 0043.scaffold00157 155954 1 G A scaffold26547 ScafM INDEL 0043.scaffold00157 155959 1 A . scaffold26547 ScafM SNP 0043.scaffold00157 155975 1 A C scaffold26547 ScafM INDEL 0043.scaffold00157 155979 2 .. AC scaffold26547 ScafM SNP 0043.scaffold00157 155989 1 G A scaffold26547 ScafM SNP 0043.scaffold00157 156004 1 C T scaffold26547 ScafM SNP 0043.scaffold00157 156019 1 A T scaffold26547 ScafM SNP 0043.scaffold00157 156022 1 T A scaffold26547 ScafM SNP 0043.scaffold00157 156027 1 C A scaffold26547 ScafM SNP 0043.scaffold00157 156077 1 T C scaffold26547 ScafM SNP 0043.scaffold00157 159453 1 G T scaffold23080 ScafM SNP 0043.scaffold00157 159477 1 G A scaffold23080 ScafM INDEL 0043.scaffold00157 159483 1 . A scaffold23080 ScafM SNP 0043.scaffold00157 159525 1 T C scaffold23080 ScafM SNP 0043.scaffold00157 159549 1 C T scaffold23080 ScafM INDEL 0043.scaffold00157 159566 2 GT .A scaffold23080 ScafM SNP 0043.scaffold00157 159577 1 T G scaffold23080 ScafM SNP 0043.scaffold00157 159594 1 C G scaffold23080 ScafM SNP 0043.scaffold00157 159602 1 T A scaffold23080 ScafM SNP 0043.scaffold00157 159608 1 G A scaffold23080 ScafM SNP 0043.scaffold00157 159617 1 A G scaffold23080 ReadM SNP 0043.scaffold00157 160710 1 C G - ScafM INDEL 0043.scaffold00157 161222 1 . T scaffold3634 ScafM SNP 0043.scaffold00157 161231 1 T C scaffold3634 ScafM SNP 0043.scaffold00157 161255 1 G A scaffold3634 ScafM SNP 0043.scaffold00157 161300 1 T G scaffold3634 ScafM SNP 0043.scaffold00157 161345 1 G A scaffold3634 ReadM SNP 0043.scaffold00157 161367 1 G A - ReadM SNP 0043.scaffold00157 161379 1 T C - ReadM SNP 0043.scaffold00157 161942 1 T C - ReadM INDEL 0043.scaffold00157 162977 1 T . - ReadM SNP 0043.scaffold00157 163345 1 C T - ReadM SNP 0043.scaffold00157 163348 1 A G - ReadM SNP 0043.scaffold00157 163421 1 T C - ReadM SNP 0043.scaffold00157 163437 1 T G - ReadM SNP 0043.scaffold00157 163494 1 G A - ReadM SNP 0043.scaffold00157 163501 1 C T - ReadM SNP 0043.scaffold00157 163536 1 A G - ReadM SNP 0043.scaffold00157 163680 1 A T - ReadM SNP 0043.scaffold00157 163734 1 C T - ReadM SNP 0043.scaffold00157 163851 1 T C - ReadM SNP 0043.scaffold00157 163926 1 T G - ReadM SNP 0043.scaffold00157 163999 1 T C - ReadM SNP 0043.scaffold00157 164038 1 C T - ReadM SNP 0043.scaffold00157 164058 1 C G - Both SNP 0043.scaffold00157 164147 1 C T scaffold3059 Both INDEL 0043.scaffold00157 164176 1 A . scaffold3059 Both INDEL 0043.scaffold00157 164202 1 . T scaffold3059 Both SNP 0043.scaffold00157 164215 1 C G scaffold3059 Both SNP 0043.scaffold00157 164240 1 A G scaffold3059 Both SNP 0043.scaffold00157 164322 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 164330 2 CT TG scaffold3059 ScafM SNP 0043.scaffold00157 164401 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 164449 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164467 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164476 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 164502 1 G A scaffold3059 ScafM INDEL 0043.scaffold00157 164506 1 . T scaffold3059 ScafM SNP 0043.scaffold00157 164543 1 G A scaffold3059 Both SNP 0043.scaffold00157 164560 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 164650 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 164699 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 164717 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 164719 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 164732 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164742 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 164756 2 AT GC scaffold3059 ScafM SNP 0043.scaffold00157 164768 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 164788 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164804 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 164835 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 164843 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 164885 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 164895 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164906 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164919 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 164939 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 164954 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 164977 1 C T scaffold3059 Both SNP 0043.scaffold00157 164989 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 165047 1 A C scaffold3059 ScafM INDEL 0043.scaffold00157 165080 3 ... AAA scaffold3059 ScafM INDEL 0043.scaffold00157 166097 1 A . scaffold3059 ScafM INDEL 0043.scaffold00157 166157 10 GTGAGTTGTG .......... scaffold3059 ScafM INDEL 0043.scaffold00157 166168 4 CTTG .... scaffold3059 ScafM SNP 0043.scaffold00157 166202 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 166224 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 166316 7 TCATGTA ....... scaffold3059 Both SNP 0043.scaffold00157 166449 1 A G scaffold3059 Both SNP 0043.scaffold00157 166511 1 T C scaffold3059 Both SNP 0043.scaffold00157 166668 1 T C scaffold3059 ReadM SNP 0043.scaffold00157 166808 1 T C - ReadM SNP 0043.scaffold00157 166912 1 C T - ReadM SNP 0043.scaffold00157 166929 1 G A - ReadM SNP 0043.scaffold00157 166949 1 C T - ReadM SNP 0043.scaffold00157 167029 1 G C - ReadM SNP 0043.scaffold00157 167084 1 G C - ScafM SNP 0043.scaffold00157 167309 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 167327 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 167391 1 . G scaffold3059 ScafM SNP 0043.scaffold00157 167395 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 167439 1 T . scaffold3059 ScafM SNP 0043.scaffold00157 167461 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 167506 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 167522 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 167612 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 167617 10 .......... TTTATTATTA scaffold3059 ScafM SNP 0043.scaffold00157 167628 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 167635 2 .. TT scaffold3059 ScafM INDEL 0043.scaffold00157 167636 1 . C scaffold3059 ScafM SNP 0043.scaffold00157 167824 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 167843 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 167854 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 167874 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 167895 1 G C scaffold3059 ScafM INDEL 0043.scaffold00157 167913 1 . A scaffold3059 ScafM SNP 0043.scaffold00157 167928 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 167958 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 167962 1 A C scaffold3059 ScafM INDEL 0043.scaffold00157 168024 1 G . scaffold3059 ScafM SNP 0043.scaffold00157 169362 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 169455 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 170891 1 T A scaffold3059 Both SNP 0043.scaffold00157 170993 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 171033 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 171197 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 171205 1 T C scaffold3059 ReadM SNP 0043.scaffold00157 171300 1 G A - ScafM SNP 0043.scaffold00157 171368 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 171388 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 171390 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 171397 1 A T scaffold3059 ReadM SNP 0043.scaffold00157 171460 1 G A - ReadM SNP 0043.scaffold00157 171482 1 A C - ReadM SNP 0043.scaffold00157 171509 1 A G - ReadM SNP 0043.scaffold00157 171540 1 T C - ReadM SNP 0043.scaffold00157 171803 1 C A - ReadM SNP 0043.scaffold00157 171882 1 T C - ReadM SNP 0043.scaffold00157 171884 1 T A - ReadM SNP 0043.scaffold00157 171933 1 T G - ReadM SNP 0043.scaffold00157 171955 1 A G - ReadM SNP 0043.scaffold00157 172038 1 G T - ReadM SNP 0043.scaffold00157 172054 1 G T - ReadM SNP 0043.scaffold00157 172060 1 G A - ReadM SNP 0043.scaffold00157 172123 1 A G - ReadM SNP 0043.scaffold00157 172158 1 G T - ReadM SNP 0043.scaffold00157 172251 1 A G - ReadM SNP 0043.scaffold00157 172287 1 G T - ReadM SNP 0043.scaffold00157 172302 1 A G - ReadM SNP 0043.scaffold00157 172326 1 T C - ReadM SNP 0043.scaffold00157 172386 1 T C - ReadM SNP 0043.scaffold00157 172407 1 A G - ReadM SNP 0043.scaffold00157 172420 1 A C - ReadM SNP 0043.scaffold00157 172445 1 A G - ReadM SNP 0043.scaffold00157 172527 1 T C - ReadM SNP 0043.scaffold00157 172530 1 T G - ReadM SNP 0043.scaffold00157 172558 1 A G - ReadM SNP 0043.scaffold00157 172630 1 T C - ReadM SNP 0043.scaffold00157 172640 1 C T - ReadM SNP 0043.scaffold00157 172661 1 A G - ReadM SNP 0043.scaffold00157 172709 1 G A - ReadM SNP 0043.scaffold00157 172840 1 A G - ReadM SNP 0043.scaffold00157 172943 1 C A - ReadM SNP 0043.scaffold00157 172968 1 A T - ReadM SNP 0043.scaffold00157 172982 1 G A - ReadM SNP 0043.scaffold00157 173022 1 A T - ReadM SNP 0043.scaffold00157 173027 1 A T - ReadM SNP 0043.scaffold00157 173086 1 G A - ReadM SNP 0043.scaffold00157 173162 1 A G - ReadM SNP 0043.scaffold00157 173230 1 T C - ReadM SNP 0043.scaffold00157 173289 1 C G - ReadM SNP 0043.scaffold00157 173398 1 G A - ReadM SNP 0043.scaffold00157 173437 1 G A - ReadM SNP 0043.scaffold00157 173519 1 C A - ReadM SNP 0043.scaffold00157 173597 1 G C - ReadM SNP 0043.scaffold00157 173637 1 G T - ReadM SNP 0043.scaffold00157 173701 1 T C - ReadM SNP 0043.scaffold00157 173725 1 G C - ReadM SNP 0043.scaffold00157 173741 1 G A - ReadM SNP 0043.scaffold00157 173810 1 C A - ReadM SNP 0043.scaffold00157 173813 1 A T - ReadM SNP 0043.scaffold00157 173849 1 A T - ReadM SNP 0043.scaffold00157 173859 1 G A - ReadM SNP 0043.scaffold00157 174147 1 G A - ReadM SNP 0043.scaffold00157 174216 1 C T - ReadM SNP 0043.scaffold00157 174245 1 A C - ReadM SNP 0043.scaffold00157 174256 1 C G - ReadM SNP 0043.scaffold00157 174351 1 A G - ReadM SNP 0043.scaffold00157 174407 1 T G - ReadM SNP 0043.scaffold00157 174478 1 T C - ReadM SNP 0043.scaffold00157 174500 1 A G - ReadM SNP 0043.scaffold00157 174563 1 T C - ReadM INDEL 0043.scaffold00157 174626 1 . A - ReadM SNP 0043.scaffold00157 174747 1 G A - ReadM SNP 0043.scaffold00157 174796 1 T C - ScafM INDEL 0043.scaffold00157 174900 1 . T scaffold3059 ScafM SNP 0043.scaffold00157 174907 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 174939 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 174954 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 174994 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 175011 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 175024 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 175061 2 GC CA scaffold3059 ScafM INDEL 0043.scaffold00157 175100 1 T . scaffold3059 ScafM SNP 0043.scaffold00157 175125 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 175162 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 175178 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 175185 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 175209 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 175235 1 A C scaffold3059 ScafM INDEL 0043.scaffold00157 175336 1 . G scaffold3059 ScafM INDEL 0043.scaffold00157 175339 1 A . scaffold3059 ScafM SNP 0043.scaffold00157 175342 1 T C scaffold3059 ReadM SNP 0043.scaffold00157 178067 1 A C - ReadM SNP 0043.scaffold00157 178364 1 C T - ReadM SNP 0043.scaffold00157 178378 1 A G - ScafM SNP 0043.scaffold00157 178419 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 178430 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 178432 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 178439 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 178471 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 178480 2 GG AA scaffold3059 ScafM SNP 0043.scaffold00157 178483 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 178502 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 178509 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 178519 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 178529 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 178533 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 178560 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 178608 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 178630 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 178636 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 178654 1 G A scaffold3059 ReadM SNP 0043.scaffold00157 179120 1 T G - ReadM SNP 0043.scaffold00157 179486 1 C T - ReadM SNP 0043.scaffold00157 179524 1 A G - ReadM SNP 0043.scaffold00157 179607 1 C A - ReadM SNP 0043.scaffold00157 179665 1 G A - ReadM SNP 0043.scaffold00157 179675 1 A C - ReadM INDEL 0043.scaffold00157 179764 1 . T - ReadM SNP 0043.scaffold00157 179819 1 C A - ReadM SNP 0043.scaffold00157 179916 1 C T - ReadM SNP 0043.scaffold00157 179999 1 C G - ReadM SNP 0043.scaffold00157 180015 1 C A - ReadM SNP 0043.scaffold00157 180116 1 T C - ReadM SNP 0043.scaffold00157 180150 1 T C - ReadM SNP 0043.scaffold00157 180400 1 G A - ReadM SNP 0043.scaffold00157 180779 1 C G - ReadM SNP 0043.scaffold00157 180828 1 G A - ScafM SNP 0043.scaffold00157 181068 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 181132 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 181141 1 C G scaffold3059 ScafM INDEL 0043.scaffold00157 181154 1 T . scaffold3059 ScafM SNP 0043.scaffold00157 181161 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 181224 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 181225 2 .A GT scaffold3059 ScafM SNP 0043.scaffold00157 181264 2 GT TC scaffold3059 ScafM INDEL 0043.scaffold00157 181282 1 G . scaffold3059 ScafM SNP 0043.scaffold00157 181308 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 181368 1 . T scaffold3059 ScafM SNP 0043.scaffold00157 181370 1 A T scaffold3059 ScafM INDEL 0043.scaffold00157 181379 2 .. TT scaffold3059 ScafM SNP 0043.scaffold00157 181394 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 181405 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 181411 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 181413 1 A T scaffold3059 Both SNP 0043.scaffold00157 181513 1 G A scaffold3059 Both SNP 0043.scaffold00157 181519 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 181538 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 181643 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 181650 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 181684 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 181726 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 181737 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 181744 2 .. TA scaffold3059 ScafM SNP 0043.scaffold00157 181783 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 181801 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 181806 1 A . scaffold3059 ScafM SNP 0043.scaffold00157 181810 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 181840 1 C T scaffold3059 ReadM SNP 0043.scaffold00157 182290 1 A G - ReadM SNP 0043.scaffold00157 182310 1 G T - ReadM SNP 0043.scaffold00157 182314 1 C G - ReadM INDEL 0043.scaffold00157 182379 1 T . - ScafM SNP 0043.scaffold00157 182562 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 182576 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 182603 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 182606 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 182656 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 182659 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 182678 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 182710 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 182721 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 182726 1 C T scaffold3059 ReadM SNP 0043.scaffold00157 182811 1 G A - ReadM SNP 0043.scaffold00157 182853 1 C T - ReadM SNP 0043.scaffold00157 182868 1 G T - ReadM SNP 0043.scaffold00157 182920 1 C G - ReadM SNP 0043.scaffold00157 182949 1 A G - ReadM SNP 0043.scaffold00157 183015 1 A G - ReadM SNP 0043.scaffold00157 183028 1 C T - ReadM SNP 0043.scaffold00157 183048 1 T A - ReadM SNP 0043.scaffold00157 183122 1 A G - ReadM SNP 0043.scaffold00157 183163 1 C T - ReadM SNP 0043.scaffold00157 183207 1 A G - Both SNP 0043.scaffold00157 183417 1 A C scaffold3059 Both SNP 0043.scaffold00157 183441 1 G A scaffold3059 Both SNP 0043.scaffold00157 183484 1 A G scaffold3059 ReadM SNP 0043.scaffold00157 183681 1 C T - ReadM SNP 0043.scaffold00157 183684 1 G T - ScafM SNP 0043.scaffold00157 183887 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 183889 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 183891 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 183906 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 183942 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 183955 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 183959 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 183971 1 T C scaffold3059 ReadM SNP 0043.scaffold00157 184161 1 C G - ReadM SNP 0043.scaffold00157 184193 1 T G - ReadM SNP 0043.scaffold00157 184306 1 G A - ReadM SNP 0043.scaffold00157 184341 1 A G - ReadM INDEL 0043.scaffold00157 184367 1 . T - ReadM SNP 0043.scaffold00157 184376 1 A G - ReadM SNP 0043.scaffold00157 184461 1 A T - ReadM SNP 0043.scaffold00157 184497 1 G A - ReadM SNP 0043.scaffold00157 184547 1 G C - ReadM SNP 0043.scaffold00157 184580 1 G A - ReadM SNP 0043.scaffold00157 184644 1 A C - ReadM SNP 0043.scaffold00157 184678 1 T G - ReadM SNP 0043.scaffold00157 184681 1 T C - ReadM SNP 0043.scaffold00157 184904 1 G A - ReadM SNP 0043.scaffold00157 184990 1 G C - ReadM SNP 0043.scaffold00157 185004 1 G A - ReadM SNP 0043.scaffold00157 185032 1 T G - ReadM SNP 0043.scaffold00157 185087 1 A T - ReadM SNP 0043.scaffold00157 185104 1 T G - ReadM SNP 0043.scaffold00157 185200 1 G A - ReadM SNP 0043.scaffold00157 185260 1 C T - ReadM SNP 0043.scaffold00157 185327 1 T C - ScafM SNP 0043.scaffold00157 186806 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 186837 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 186851 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 186868 1 . A scaffold3059 ScafM SNP 0043.scaffold00157 186896 3 AGG TAT scaffold3059 ScafM SNP 0043.scaffold00157 186903 1 C G scaffold3059 ScafM INDEL 0043.scaffold00157 186912 2 TG .. scaffold3059 ScafM SNP 0043.scaffold00157 186936 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 186963 12 GAATATGCTAGC ............ scaffold3059 ScafM SNP 0043.scaffold00157 187008 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 187010 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 187013 2 GG AT scaffold3059 ScafM SNP 0043.scaffold00157 187058 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 187257 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 187292 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 187306 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 187462 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 187480 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 187821 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 187826 1 A C scaffold3059 ScafM INDEL 0043.scaffold00157 187856 2 .. AA scaffold3059 ScafM SNP 0043.scaffold00157 187874 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 187878 1 T A scaffold3059 ScafM INDEL 0043.scaffold00157 187882 1 A . scaffold3059 ScafM SNP 0043.scaffold00157 187960 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 187962 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 187976 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 187987 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 188023 1 G C scaffold3059 ScafM INDEL 0043.scaffold00157 188046 1 A . scaffold3059 ScafM SNP 0043.scaffold00157 188057 2 AT CG scaffold3059 ScafM SNP 0043.scaffold00157 188069 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 188103 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 188115 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 188119 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 188129 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 188136 1 G . scaffold3059 ScafM SNP 0043.scaffold00157 188147 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 188170 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 188188 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 188196 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 188227 2 CC TT scaffold3059 ScafM SNP 0043.scaffold00157 188232 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 188289 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 188297 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 188305 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 188307 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 188323 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 188336 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 188343 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 188380 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 188398 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 188405 2 CA AT scaffold3059 ScafM SNP 0043.scaffold00157 188416 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 188435 1 G T scaffold3059 Both SNP 0043.scaffold00157 188482 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 188622 2 AT GC scaffold3059 ScafM SNP 0043.scaffold00157 188628 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 188633 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 188697 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 188703 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 188710 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 188740 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 188743 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 188757 1 G A scaffold3059 Both SNP 0043.scaffold00157 188804 1 G A scaffold3059 Both SNP 0043.scaffold00157 188810 1 G T scaffold3059 Both SNP 0043.scaffold00157 188895 1 G A scaffold3059 Both SNP 0043.scaffold00157 188922 1 A C scaffold3059 Both SNP 0043.scaffold00157 188943 1 A G scaffold3059 Both SNP 0043.scaffold00157 189022 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 189099 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 189128 2 AT TC scaffold3059 ScafM SNP 0043.scaffold00157 189131 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 189189 1 G A scaffold3059 ScafM INDEL 0043.scaffold00157 189230 4 CGAT .... scaffold3059 ScafM SNP 0043.scaffold00157 189250 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 189273 1 T G scaffold3059 Both SNP 0043.scaffold00157 189343 1 A G scaffold3059 Both SNP 0043.scaffold00157 189397 1 T A scaffold3059 Both SNP 0043.scaffold00157 189450 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 189467 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 189476 1 C A scaffold3059 ScafM INDEL 0043.scaffold00157 189498 2 .. TT scaffold3059 ScafM SNP 0043.scaffold00157 189534 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 189559 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 189565 10 .......... ATGAGAACAT scaffold3059 ScafM SNP 0043.scaffold00157 189595 1 G A scaffold3059 Both SNP 0043.scaffold00157 189696 1 G A scaffold3059 Both SNP 0043.scaffold00157 189757 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 189775 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 189805 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 189809 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 189813 1 C T scaffold3059 ScafM INDEL 0043.scaffold00157 189868 2 .. TT scaffold3059 ScafM INDEL 0043.scaffold00157 189869 1 . G scaffold3059 ScafM SNP 0043.scaffold00157 189880 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 189895 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 189899 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 189903 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 189910 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 189914 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 189939 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 189963 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 189975 1 . G scaffold3059 ScafM SNP 0043.scaffold00157 189977 2 AG TC scaffold3059 ScafM SNP 0043.scaffold00157 190000 1 G C scaffold3059 ScafM SNP 0043.scaffold00157 190020 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 190035 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 190075 2 .. TT scaffold3059 ScafM SNP 0043.scaffold00157 190089 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 190117 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 190124 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 190141 1 A G scaffold3059 ScafM INDEL 0043.scaffold00157 190159 1 A . scaffold3059 ScafM INDEL 0043.scaffold00157 190162 8 TAATAGGC ........ scaffold3059 ScafM SNP 0043.scaffold00157 190207 1 G A scaffold3059 Both SNP 0043.scaffold00157 190267 1 G A scaffold3059 Both SNP 0043.scaffold00157 190272 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 190296 1 G A scaffold3059 Both SNP 0043.scaffold00157 190370 1 C T scaffold3059 Both SNP 0043.scaffold00157 190420 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 190439 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 190454 1 T A scaffold3059 ScafM INDEL 0043.scaffold00157 190459 1 . G scaffold3059 ScafM SNP 0043.scaffold00157 190518 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 190531 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 190542 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 190554 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 190577 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 190619 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 190628 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 190633 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 190667 1 C A scaffold3059 ScafM INDEL 0043.scaffold00157 190717 1 C . scaffold3059 ScafM SNP 0043.scaffold00157 190737 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 190784 2 TA GG scaffold3059 ScafM SNP 0043.scaffold00157 190857 2 CA TC scaffold3059 ScafM SNP 0043.scaffold00157 190864 1 G T scaffold3059 ScafM INDEL 0043.scaffold00157 190875 1 . T scaffold3059 ScafM SNP 0043.scaffold00157 191573 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 191645 2 TT AA scaffold3059 ScafM INDEL 0043.scaffold00157 191667 1 A . scaffold3059 ScafM SNP 0043.scaffold00157 191671 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 191769 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 191805 1 G A scaffold3059 ScafM INDEL 0043.scaffold00157 191816 8 ........ AAATTAAA scaffold3059 ScafM SNP 0043.scaffold00157 191833 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 191941 1 A T scaffold3059 Both SNP 0043.scaffold00157 192134 1 T A scaffold3059 Both INDEL 0043.scaffold00157 192138 1 . T scaffold3059 Both SNP 0043.scaffold00157 192185 1 G C scaffold3059 Both SNP 0043.scaffold00157 192231 1 T A scaffold3059 ScafM SNP 0043.scaffold00157 192285 1 C T scaffold3059 Both SNP 0043.scaffold00157 192344 1 G T scaffold3059 Both SNP 0043.scaffold00157 192387 1 A G scaffold3059 Both SNP 0043.scaffold00157 192442 1 A T scaffold3059 Both SNP 0043.scaffold00157 192615 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 192738 2 AA GC scaffold3059 ScafM INDEL 0043.scaffold00157 192751 29 TTTTTTTAAACGGAATCAAAAAAAAAAGG ............................. scaffold3059 ScafM INDEL 0043.scaffold00157 192782 4 CGGT .... scaffold3059 ScafM SNP 0043.scaffold00157 192792 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 192801 1 A C scaffold3059 ScafM INDEL 0043.scaffold00157 192861 4 .... AAAA scaffold3059 ScafM INDEL 0043.scaffold00157 192866 1 . T scaffold3059 ScafM INDEL 0043.scaffold00157 192867 1 . T scaffold3059 ScafM SNP 0043.scaffold00157 192869 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 192899 1 T A scaffold3059 ScafM INDEL 0043.scaffold00157 193045 1 C . scaffold3059 ScafM INDEL 0043.scaffold00157 193055 12 TCCCCCTATAAA ............ scaffold3059 ScafM SNP 0043.scaffold00157 193080 1 G A scaffold3059 Both SNP 0043.scaffold00157 193157 1 T C scaffold3059 Both SNP 0043.scaffold00157 193177 1 A T scaffold3059 Both SNP 0043.scaffold00157 193263 1 C G scaffold3059 ReadM SNP 0043.scaffold00157 193313 1 A G - ReadM SNP 0043.scaffold00157 193329 1 C T - ReadM SNP 0043.scaffold00157 193388 1 C A - ReadM SNP 0043.scaffold00157 193593 1 C G - ReadM SNP 0043.scaffold00157 193680 1 A G - ReadM SNP 0043.scaffold00157 193792 1 C T - ReadM SNP 0043.scaffold00157 193870 1 G C - ReadM SNP 0043.scaffold00157 193876 1 C T - Both SNP 0043.scaffold00157 194208 1 T A scaffold3059 Both SNP 0043.scaffold00157 194229 1 C T scaffold3059 Both SNP 0043.scaffold00157 194279 1 A T scaffold3059 Both INDEL 0043.scaffold00157 194294 1 . A scaffold3059 Both SNP 0043.scaffold00157 194347 1 T C scaffold3059 Both SNP 0043.scaffold00157 194351 1 A G scaffold3059 Both SNP 0043.scaffold00157 194548 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 194578 1 G T scaffold3059 ScafM SNP 0043.scaffold00157 194610 1 A C scaffold3059 ScafM SNP 0043.scaffold00157 194621 1 A C scaffold3059 Both SNP 0043.scaffold00157 194655 1 A G scaffold3059 Both SNP 0043.scaffold00157 194749 1 G A scaffold3059 Both SNP 0043.scaffold00157 194847 1 T C scaffold3059 ReadM SNP 0043.scaffold00157 194894 1 G A - ReadM SNP 0043.scaffold00157 194931 1 G A - ScafM SNP 0043.scaffold00157 195511 1 C T scaffold5470 ScafM INDEL 0043.scaffold00157 195545 21 ..................... ATATAAGCTTGTCACCGTGAA scaffold5470 ScafM INDEL 0043.scaffold00157 195547 6 ...... CAAAAT scaffold5470 ScafM SNP 0043.scaffold00157 195565 1 T G scaffold5470 ScafM SNP 0043.scaffold00157 196190 1 C A scaffold6196 ScafM SNP 0043.scaffold00157 196194 1 A G scaffold6196 ReadM SNP 0043.scaffold00157 196947 1 G T - ScafM SNP 0043.scaffold00157 197138 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 197174 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 197178 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 197184 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 197193 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 197250 2 .. TT scaffold3059 ScafM INDEL 0043.scaffold00157 197273 3 TAA ... scaffold3059 ScafM INDEL 0043.scaffold00157 197314 3 ... ACA scaffold3059 ScafM SNP 0043.scaffold00157 197348 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 197363 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 197401 1 A C scaffold3059 Both SNP 0043.scaffold00157 197457 1 G T scaffold3059 ReadM SNP 0043.scaffold00157 197579 1 A G - ReadM SNP 0043.scaffold00157 197634 1 C T - Both SNP 0043.scaffold00157 197811 1 G A scaffold3059 Both SNP 0043.scaffold00157 197814 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 197943 1 T C scaffold3059 ScafM INDEL 0043.scaffold00157 197955 5 AAATT ..... scaffold3059 Both SNP 0043.scaffold00157 198044 1 A G scaffold3059 Both SNP 0043.scaffold00157 198114 1 T C scaffold3059 Both SNP 0043.scaffold00157 198240 1 T G scaffold3059 Both INDEL 0043.scaffold00157 198280 3 ... AAT scaffold3059 ReadM SNP 0043.scaffold00157 198446 1 C T - ScafM SNP 0043.scaffold00157 198743 1 T C scaffold3059 ScafM SNP 0043.scaffold00157 198762 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 198772 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 198774 1 A G scaffold3059 Both SNP 0043.scaffold00157 198823 1 G A scaffold3059 Both SNP 0043.scaffold00157 198886 1 G A scaffold3059 Both SNP 0043.scaffold00157 198891 1 C G scaffold3059 Both SNP 0043.scaffold00157 198990 1 T A scaffold3059 Both SNP 0043.scaffold00157 199142 1 T C scaffold3059 Both SNP 0043.scaffold00157 199239 1 T C scaffold3059 Both SNP 0043.scaffold00157 199241 1 A G scaffold3059 Both SNP 0043.scaffold00157 199312 1 T G scaffold3059 ScafM SNP 0043.scaffold00157 199867 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 199869 1 A G scaffold3059 ReadM SNP 0043.scaffold00157 200406 1 G T - ReadM SNP 0043.scaffold00157 200435 1 C A - ReadM SNP 0043.scaffold00157 200849 1 T C - ReadM SNP 0043.scaffold00157 201140 1 T C - ReadM SNP 0043.scaffold00157 201455 1 T C - ReadM SNP 0043.scaffold00157 201529 1 A T - ReadM INDEL 0043.scaffold00157 201907 1 T . - ReadM SNP 0043.scaffold00157 201953 1 G T - ReadM SNP 0043.scaffold00157 202090 1 T C - ReadM SNP 0043.scaffold00157 202107 1 A G - ReadM SNP 0043.scaffold00157 202181 1 G C - ReadM SNP 0043.scaffold00157 202206 1 T C - ReadM SNP 0043.scaffold00157 202230 1 T A - ReadM INDEL 0043.scaffold00157 202659 1 G . - ReadM SNP 0043.scaffold00157 202736 1 C T - ReadM SNP 0043.scaffold00157 202975 1 A G - ReadM SNP 0043.scaffold00157 203166 1 T G - ReadM INDEL 0043.scaffold00157 203172 1 . C - ReadM SNP 0043.scaffold00157 203205 1 A C - ReadM SNP 0043.scaffold00157 203218 1 A G - ReadM SNP 0043.scaffold00157 203252 1 G C - ReadM INDEL 0043.scaffold00157 203503 1 . T - Both SNP 0043.scaffold00157 203548 1 T A scaffold3059 ReadM SNP 0043.scaffold00157 203569 1 C T - ReadM SNP 0043.scaffold00157 203652 1 T G - ReadM SNP 0043.scaffold00157 203667 1 T C - ReadM SNP 0043.scaffold00157 203755 1 G C - ReadM SNP 0043.scaffold00157 203767 1 C T - ReadM SNP 0043.scaffold00157 203789 1 T C - ReadM SNP 0043.scaffold00157 203853 1 A G - ReadM SNP 0043.scaffold00157 203997 1 G A - ReadM SNP 0043.scaffold00157 204224 1 T C - ReadM INDEL 0043.scaffold00157 204325 1 . G - ReadM SNP 0043.scaffold00157 204386 1 G C - ReadM SNP 0043.scaffold00157 204416 1 C T - ReadM SNP 0043.scaffold00157 204471 1 A C - ReadM SNP 0043.scaffold00157 204485 1 T A - ReadM SNP 0043.scaffold00157 206036 1 G A - ReadM SNP 0043.scaffold00157 206046 1 T C - ReadM SNP 0043.scaffold00157 206155 1 T C - ReadM SNP 0043.scaffold00157 206335 1 C T - ReadM SNP 0043.scaffold00157 206384 1 C A - Both SNP 0043.scaffold00157 206712 1 C G scaffold3059 Both SNP 0043.scaffold00157 206736 1 C T scaffold3059 ReadM SNP 0043.scaffold00157 206910 1 T C - ReadM SNP 0043.scaffold00157 206943 1 C T - Both INDEL 0043.scaffold00157 207156 1 . T scaffold3059 Both SNP 0043.scaffold00157 207499 1 C G scaffold3059 ScafM SNP 0043.scaffold00157 207570 1 A G scaffold3059 ScafM SNP 0043.scaffold00157 208090 1 C T scaffold3059 Both SNP 0043.scaffold00157 208478 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 208592 1 A T scaffold3059 ScafM SNP 0043.scaffold00157 208605 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 208622 1 C T scaffold3059 ScafM SNP 0043.scaffold00157 208653 1 C A scaffold3059 ScafM SNP 0043.scaffold00157 208704 1 G A scaffold3059 ScafM SNP 0043.scaffold00157 208756 1 A G scaffold3059 ReadM SNP 0043.scaffold00157 209320 1 A G - ReadM SNP 0043.scaffold00157 209339 1 G T - ReadM INDEL 0043.scaffold00157 209419 1 T . - ReadM SNP 0043.scaffold00157 209559 1 A C - ReadM SNP 0043.scaffold00157 209583 1 G A - ReadM SNP 0043.scaffold00157 209598 1 T A - ReadM SNP 0043.scaffold00157 209630 1 A G - ReadM SNP 0043.scaffold00157 209722 1 T A - ReadM SNP 0043.scaffold00157 209919 1 A G - ReadM SNP 0043.scaffold00157 210130 1 G A - ReadM SNP 0043.scaffold00157 210207 1 A G - ReadM SNP 0043.scaffold00157 210259 1 G T - ReadM SNP 0043.scaffold00157 210266 1 C T - ReadM SNP 0043.scaffold00157 210297 1 T C - ReadM SNP 0043.scaffold00157 210301 1 A G - ReadM SNP 0043.scaffold00157 210393 1 G A - ReadM SNP 0043.scaffold00157 210487 1 G T - ReadM SNP 0043.scaffold00157 210505 1 T C - ReadM SNP 0043.scaffold00157 210696 1 G A - Both SNP 0043.scaffold00157 210763 1 T C scaffold211 Both SNP 0043.scaffold00157 210814 1 G T scaffold211 ScafM SNP 0043.scaffold00157 210837 1 T C scaffold211 ScafM SNP 0043.scaffold00157 210839 1 G T scaffold211 ReadM SNP 0043.scaffold00157 210938 1 A G - ReadM SNP 0043.scaffold00157 211094 1 T C - ReadM SNP 0043.scaffold00157 211166 1 T C - Both SNP 0043.scaffold00157 211306 1 C T scaffold211 Both SNP 0043.scaffold00157 211352 1 A C scaffold211 ReadM SNP 0043.scaffold00157 211433 1 A G - ReadM SNP 0043.scaffold00157 211472 1 T A - Both SNP 0043.scaffold00157 211696 1 G T scaffold211 Both SNP 0043.scaffold00157 211723 1 C A scaffold211 ScafM SNP 0043.scaffold00157 211726 1 C T scaffold211 ScafM SNP 0043.scaffold00157 211747 1 A C scaffold211 ScafM SNP 0043.scaffold00157 211752 1 T C scaffold211 ScafM SNP 0043.scaffold00157 211756 1 T C scaffold211 ScafM SNP 0043.scaffold00157 211782 1 T C scaffold211 Both SNP 0043.scaffold00157 211816 1 A C scaffold211 Both SNP 0043.scaffold00157 211821 1 G C scaffold211 Both SNP 0043.scaffold00157 211886 1 A G scaffold211 Both SNP 0043.scaffold00157 212040 1 T C scaffold211 ScafM INDEL 0043.scaffold00157 212118 6 ...... CACTTT scaffold211 Both SNP 0043.scaffold00157 212158 1 G A scaffold211 Both SNP 0043.scaffold00157 212245 1 T C scaffold211 Both SNP 0043.scaffold00157 212327 1 G A scaffold211 Both SNP 0043.scaffold00157 212334 1 A G scaffold211 Both SNP 0043.scaffold00157 212358 1 T C scaffold211 Both SNP 0043.scaffold00157 212391 1 C A scaffold211 Both SNP 0043.scaffold00157 212603 1 A C scaffold211 ReadM SNP 0043.scaffold00157 212691 1 A G - ReadM SNP 0043.scaffold00157 212765 1 T C - ReadM SNP 0043.scaffold00157 212795 1 G C - ReadM SNP 0043.scaffold00157 212801 1 C T - ReadM SNP 0043.scaffold00157 212847 1 T C - ReadM SNP 0043.scaffold00157 212882 1 A T - ReadM SNP 0043.scaffold00157 213029 1 T A - ReadM SNP 0043.scaffold00157 213046 1 A G - Both SNP 0043.scaffold00157 213061 1 G A scaffold211 Both SNP 0043.scaffold00157 213067 1 A G scaffold211 Both SNP 0043.scaffold00157 213098 1 T C scaffold211 Both SNP 0043.scaffold00157 213273 1 T C scaffold211 Both SNP 0043.scaffold00157 213348 1 T A scaffold211 Both SNP 0043.scaffold00157 213469 1 C T scaffold211 Both SNP 0043.scaffold00157 213728 1 C A scaffold211 Both SNP 0043.scaffold00157 213792 1 G A scaffold211 ScafM SNP 0043.scaffold00157 213882 1 T C scaffold211 ScafM SNP 0043.scaffold00157 213894 1 T C scaffold211 ScafM SNP 0043.scaffold00157 214926 1 C A scaffold211 ScafM SNP 0043.scaffold00157 214928 1 A T scaffold211 Both SNP 0043.scaffold00157 214971 1 C T scaffold211 Both SNP 0043.scaffold00157 215116 1 G A scaffold211 Both SNP 0043.scaffold00157 215167 1 G A scaffold211 Both SNP 0043.scaffold00157 215221 1 A T scaffold211 Both INDEL 0043.scaffold00157 215310 1 . C scaffold211 ScafM SNP 0043.scaffold00157 215315 1 T A scaffold211 Both SNP 0043.scaffold00157 215370 1 A C scaffold211 Both SNP 0043.scaffold00157 215458 1 C G scaffold211 Both SNP 0043.scaffold00157 215461 1 T C scaffold211 Both SNP 0043.scaffold00157 215476 1 T C scaffold211 Both SNP 0043.scaffold00157 215720 1 A T scaffold211 ReadM SNP 0043.scaffold00157 215809 1 A G - ScafM SNP 0043.scaffold00157 215938 1 A T scaffold211 ScafM SNP 0043.scaffold00157 215944 1 C T scaffold211 ScafM INDEL 0043.scaffold00157 215983 1 . A scaffold211 ScafM SNP 0043.scaffold00157 216080 1 T G scaffold211 ScafM INDEL 0043.scaffold00157 216112 1 T . scaffold211 Both SNP 0043.scaffold00157 216418 1 G A scaffold211 Both SNP 0043.scaffold00157 216470 1 T G scaffold211 ScafM INDEL 0043.scaffold00157 216562 7 ....... ACAGCAA scaffold211 ScafM SNP 0043.scaffold00157 216618 1 C T scaffold211 ScafM SNP 0043.scaffold00157 216647 1 C T scaffold211 ScafM INDEL 0043.scaffold00157 216870 1 . A scaffold211 ScafM SNP 0043.scaffold00157 216941 1 G A scaffold211 ReadM SNP 0043.scaffold00157 217230 1 C T - ReadM SNP 0043.scaffold00157 217305 1 A G - ReadM SNP 0043.scaffold00157 217499 1 C A - ReadM SNP 0043.scaffold00157 217509 1 A C - ReadM SNP 0043.scaffold00157 219510 1 A C - ScafM SNP 0043.scaffold00157 220917 1 G A scaffold18260 ScafM INDEL 0043.scaffold00157 220972 1 T . scaffold18260 ScafM SNP 0043.scaffold00157 220974 1 C T scaffold18260 ScafM SNP 0043.scaffold00157 220976 1 T A scaffold18260 ScafM INDEL 0043.scaffold00157 221026 2 AG .. scaffold18260 ReadM SNP 0043.scaffold00157 221042 1 A T - ScafM SNP 0043.scaffold00157 221045 1 A G scaffold18260 ScafM INDEL 0043.scaffold00157 221050 1 . T scaffold18260 ScafM SNP 0043.scaffold00157 221053 1 A G scaffold18260 ScafM SNP 0043.scaffold00157 221092 2 GC CA scaffold18260 ReadM SNP 0043.scaffold00157 221097 1 A G - ScafM SNP 0043.scaffold00157 221097 1 A T scaffold18260 ScafM SNP 0043.scaffold00157 221111 1 A T scaffold18260 ScafM SNP 0043.scaffold00157 221129 1 A C scaffold18260 ScafM SNP 0043.scaffold00157 221135 1 T C scaffold18260 ScafM SNP 0043.scaffold00157 221138 1 T C scaffold18260 ReadM SNP 0043.scaffold00157 221151 1 C A - ScafM SNP 0043.scaffold00157 221151 1 C T scaffold18260 ScafM SNP 0043.scaffold00157 221163 1 A G scaffold18260 ReadM SNP 0043.scaffold00157 221166 1 C G - Both SNP 0043.scaffold00157 221186 1 C T scaffold18260 ScafM INDEL 0043.scaffold00157 221194 1 . A scaffold18260 ScafM SNP 0043.scaffold00157 221196 1 A G scaffold18260 ScafM SNP 0043.scaffold00157 221214 1 T C scaffold18260 ScafM INDEL 0043.scaffold00157 221221 2 TA .. scaffold18260 ScafM SNP 0043.scaffold00157 221240 1 A G scaffold18260 ScafM INDEL 0043.scaffold00157 221254 1 . G scaffold18260 ScafM SNP 0043.scaffold00157 221989 1 T A scaffold211 ScafM SNP 0043.scaffold00157 221998 1 G A scaffold211 ScafM SNP 0043.scaffold00157 222038 1 C T scaffold211 ScafM SNP 0043.scaffold00157 222113 1 C T scaffold211 Both SNP 0043.scaffold00157 222282 1 G T scaffold211 Both SNP 0043.scaffold00157 222413 1 A G scaffold211 Both SNP 0043.scaffold00157 222433 1 A C scaffold211 ScafM SNP 0043.scaffold00157 222565 1 C G scaffold211 Both SNP 0043.scaffold00157 222645 1 C G scaffold211 Both SNP 0043.scaffold00157 222707 1 G C scaffold211 Both SNP 0043.scaffold00157 222906 1 C T scaffold211 ScafM INDEL 0043.scaffold00157 222954 2 .. TT scaffold211 Both SNP 0043.scaffold00157 223029 1 A G scaffold211 Both SNP 0043.scaffold00157 223042 1 G A scaffold211 Both SNP 0043.scaffold00157 223171 1 T A scaffold211 Both SNP 0043.scaffold00157 223189 1 T G scaffold211 ScafM SNP 0043.scaffold00157 223409 1 A G scaffold211 ScafM SNP 0043.scaffold00157 223418 1 A G scaffold211 ScafM SNP 0043.scaffold00157 223420 1 G A scaffold211 ScafM SNP 0043.scaffold00157 223439 1 A G scaffold211 ScafM SNP 0043.scaffold00157 223445 1 G A scaffold211 ScafM INDEL 0043.scaffold00157 223468 2 .. CT scaffold211 ScafM SNP 0043.scaffold00157 223476 1 C A scaffold211 Both SNP 0043.scaffold00157 223531 1 G A scaffold211 Both SNP 0043.scaffold00157 223568 1 T C scaffold211 Both SNP 0043.scaffold00157 223577 1 C G scaffold211 Both SNP 0043.scaffold00157 223658 1 T C scaffold211 Both SNP 0043.scaffold00157 223760 1 T G scaffold211 Both SNP 0043.scaffold00157 223815 1 G A scaffold211 Both SNP 0043.scaffold00157 223893 1 A G scaffold211 Both SNP 0043.scaffold00157 223900 1 C T scaffold211 ScafM SNP 0043.scaffold00157 223922 1 T A scaffold211 ScafM SNP 0043.scaffold00157 223929 2 GG TA scaffold211 Both SNP 0043.scaffold00157 223975 1 G A scaffold211 ReadM SNP 0043.scaffold00157 224027 1 C A - Both SNP 0043.scaffold00157 224192 1 A G scaffold211 Both INDEL 0043.scaffold00157 224195 1 A . scaffold211 Both SNP 0043.scaffold00157 224263 1 T C scaffold211 Both SNP 0043.scaffold00157 224312 1 T C scaffold211 Both SNP 0043.scaffold00157 224355 1 G C scaffold211 Both SNP 0043.scaffold00157 224488 1 A G scaffold211 Both SNP 0043.scaffold00157 224540 1 G A scaffold211 Both SNP 0043.scaffold00157 224557 1 T C scaffold211 ScafM SNP 0043.scaffold00157 224598 1 C A scaffold211 ScafM SNP 0043.scaffold00157 224600 1 A G scaffold211 Both SNP 0043.scaffold00157 224707 1 C G scaffold211 Both SNP 0043.scaffold00157 224728 1 A C scaffold211 Both SNP 0043.scaffold00157 224757 1 T A scaffold211 Both SNP 0043.scaffold00157 224772 1 G A scaffold211 Both SNP 0043.scaffold00157 224848 1 C A scaffold211 Both SNP 0043.scaffold00157 224934 1 C A scaffold211 Both SNP 0043.scaffold00157 225054 1 G T scaffold211 ReadM SNP 0043.scaffold00157 225521 1 A C - ReadM SNP 0043.scaffold00157 225614 1 G A - ReadM SNP 0043.scaffold00157 225717 1 C T - ReadM SNP 0043.scaffold00157 225735 1 C A - ReadM SNP 0043.scaffold00157 225767 1 C A - ReadM SNP 0043.scaffold00157 225924 1 T C - Both SNP 0043.scaffold00157 226161 1 C T scaffold211 Both SNP 0043.scaffold00157 226193 1 G A scaffold211 Both SNP 0043.scaffold00157 226202 1 A G scaffold211 Both SNP 0043.scaffold00157 226254 1 A G scaffold211 Both SNP 0043.scaffold00157 226288 1 C A scaffold211 Both SNP 0043.scaffold00157 226384 1 C A scaffold211 Both SNP 0043.scaffold00157 226414 1 C A scaffold211 ReadM SNP 0043.scaffold00157 226520 1 A T - ReadM SNP 0043.scaffold00157 226569 1 T C - ReadM SNP 0043.scaffold00157 226592 1 C A - ReadM SNP 0043.scaffold00157 226820 1 A G - ReadM SNP 0043.scaffold00157 226945 1 T C - ReadM SNP 0043.scaffold00157 227286 1 G A - ReadM SNP 0043.scaffold00157 227320 1 C T - ReadM SNP 0043.scaffold00157 227331 1 G C - ReadM SNP 0043.scaffold00157 227382 1 C T - ReadM SNP 0043.scaffold00157 227526 1 T C - Both SNP 0043.scaffold00157 227622 1 C T scaffold211 ScafM SNP 0043.scaffold00157 227713 1 T C scaffold211 ReadM SNP 0043.scaffold00157 232986 1 A C - ReadM SNP 0043.scaffold00157 233172 1 G A - ReadM SNP 0043.scaffold00157 235163 1 T C - Both SNP 0043.scaffold00157 240348 1 G A scaffold211 Both SNP 0043.scaffold00157 240378 1 C T scaffold211 ScafM SNP 0043.scaffold00157 240416 1 G T scaffold211 ScafM SNP 0043.scaffold00157 240440 1 A G scaffold211 ScafM SNP 0043.scaffold00157 240449 1 T C scaffold211 Both SNP 0043.scaffold00157 240508 1 C A scaffold211 Both INDEL 0043.scaffold00157 240568 1 . A scaffold211 Both SNP 0043.scaffold00157 240644 1 G A scaffold211 Both SNP 0043.scaffold00157 240761 1 G A scaffold211 Both SNP 0043.scaffold00157 240773 1 G T scaffold211 ReadM SNP 0043.scaffold00157 240993 1 G A - ReadM SNP 0043.scaffold00157 241058 1 C T - ReadM SNP 0043.scaffold00157 241179 1 T C - ReadM SNP 0043.scaffold00157 241187 1 C A - ReadM SNP 0043.scaffold00157 241374 1 A T - ReadM SNP 0043.scaffold00157 241434 1 G T - ReadM SNP 0043.scaffold00157 241517 1 T C - ReadM SNP 0043.scaffold00157 241527 1 C T - ReadM SNP 0043.scaffold00157 241649 1 A G - ReadM SNP 0043.scaffold00157 241665 1 A G - ScafM SNP 0043.scaffold00157 241737 1 C T scaffold211 ScafM INDEL 0043.scaffold00157 241761 2 AG .. scaffold211 ScafM SNP 0043.scaffold00157 241767 1 A T scaffold211 ScafM SNP 0043.scaffold00157 241769 2 GA AT scaffold211 ScafM SNP 0043.scaffold00157 241850 1 T A scaffold211 ScafM SNP 0043.scaffold00157 242513 1 C T scaffold211 ScafM SNP 0043.scaffold00157 242557 1 T C scaffold211 ScafM SNP 0043.scaffold00157 242626 1 G T scaffold211 ScafM INDEL 0043.scaffold00157 242856 1 . A scaffold211 ScafM INDEL 0043.scaffold00157 242875 1 . A scaffold211 ScafM SNP 0043.scaffold00157 242907 1 A T scaffold211 ScafM SNP 0043.scaffold00157 242926 1 T C scaffold211 ScafM SNP 0043.scaffold00157 243457 1 A T scaffold211 ScafM SNP 0043.scaffold00157 243492 1 A C scaffold211 ScafM SNP 0043.scaffold00157 243508 1 A C scaffold211 ScafM SNP 0043.scaffold00157 243554 1 G A scaffold211 ReadM SNP 0043.scaffold00157 243815 1 C A - ReadM SNP 0043.scaffold00157 243929 1 A T - ReadM SNP 0043.scaffold00157 243932 1 G A - ReadM SNP 0043.scaffold00157 244479 1 T A - ReadM SNP 0043.scaffold00157 244509 1 C A - ReadM SNP 0043.scaffold00157 244617 1 C A - ReadM SNP 0043.scaffold00157 244655 1 C A - ScafM SNP 0043.scaffold00157 244762 1 T C scaffold211 ScafM SNP 0043.scaffold00157 244774 1 T C scaffold211 Both SNP 0043.scaffold00157 245082 1 C T scaffold211 ReadM INDEL 0043.scaffold00157 245165 1 G . - ReadM SNP 0043.scaffold00157 245182 1 A G - ScafM SNP 0043.scaffold00157 245352 1 T C scaffold211 ScafM SNP 0043.scaffold00157 245471 1 T G scaffold211 ScafM SNP 0043.scaffold00157 245474 1 A T scaffold211 ScafM SNP 0043.scaffold00157 245481 1 C T scaffold211 ScafM SNP 0043.scaffold00157 245662 1 C T scaffold211 ScafM SNP 0043.scaffold00157 245683 1 T G scaffold211 Both SNP 0043.scaffold00157 245757 1 T C scaffold211 ScafM SNP 0043.scaffold00157 245800 1 A G scaffold211 ScafM SNP 0043.scaffold00157 245804 1 T A scaffold211 ScafM SNP 0043.scaffold00157 245817 1 T A scaffold211 ScafM SNP 0043.scaffold00157 246114 1 A G scaffold211 ScafM SNP 0043.scaffold00157 246120 1 A G scaffold211 ScafM SNP 0043.scaffold00157 246136 1 G A scaffold211 ScafM SNP 0043.scaffold00157 246150 2 AT TG scaffold211 ScafM SNP 0043.scaffold00157 246195 1 G A scaffold211 ScafM SNP 0043.scaffold00157 246393 1 A G scaffold211 ScafM INDEL 0043.scaffold00157 246439 1 . G scaffold211 ScafM SNP 0043.scaffold00157 246743 1 T C scaffold211 ScafM SNP 0043.scaffold00157 246773 1 T C scaffold211 ScafM SNP 0043.scaffold00157 246801 1 T C scaffold211 ScafM SNP 0043.scaffold00157 246867 1 G A scaffold211 ScafM SNP 0043.scaffold00157 246893 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250023 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250032 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250039 2 TG CA scaffold211 ScafM SNP 0043.scaffold00157 250063 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250068 1 T C scaffold211 ScafM SNP 0043.scaffold00157 250079 1 G A scaffold211 ScafM INDEL 0043.scaffold00157 250081 1 . T scaffold211 ScafM SNP 0043.scaffold00157 250083 1 C G scaffold211 ScafM SNP 0043.scaffold00157 250090 1 G T scaffold211 ScafM SNP 0043.scaffold00157 250099 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250116 1 T C scaffold211 ScafM SNP 0043.scaffold00157 250124 2 CC TG scaffold211 ScafM SNP 0043.scaffold00157 250162 1 C T scaffold211 ScafM SNP 0043.scaffold00157 250168 2 TC GT scaffold211 ScafM SNP 0043.scaffold00157 250171 1 A G scaffold211 ScafM SNP 0043.scaffold00157 250173 1 A G scaffold211 ScafM SNP 0043.scaffold00157 250202 1 A G scaffold211 ScafM SNP 0043.scaffold00157 250239 1 G A scaffold211 ScafM SNP 0043.scaffold00157 250242 1 T A scaffold211 ScafM SNP 0043.scaffold00157 250282 1 A G scaffold211 ScafM SNP 0043.scaffold00157 250286 2 AG GA scaffold211 ScafM SNP 0043.scaffold00157 250304 1 C G scaffold211 ScafM SNP 0043.scaffold00157 250334 1 C T scaffold211 ScafM SNP 0043.scaffold00157 250339 1 C T scaffold211 ScafM SNP 0043.scaffold00157 250380 1 G T scaffold211 ScafM SNP 0043.scaffold00157 250382 1 T A scaffold211 ScafM SNP 0043.scaffold00157 250387 1 C T scaffold211 ScafM SNP 0043.scaffold00157 250403 2 GT CC scaffold211 ScafM SNP 0043.scaffold00157 264212 1 C A scaffold11731 ScafM SNP 0043.scaffold00157 264214 1 T G scaffold11731 ScafM SNP 0043.scaffold00157 264220 1 G A scaffold11731 ScafM SNP 0043.scaffold00157 264230 1 A T scaffold11731 ScafM SNP 0043.scaffold00157 264235 1 T G scaffold11731 ScafM SNP 0043.scaffold00157 264274 1 A G scaffold11731 ScafM SNP 0043.scaffold00157 264277 1 T C scaffold11731 ScafM SNP 0043.scaffold00157 264306 1 C T scaffold11731 ScafM SNP 0043.scaffold00157 264557 1 G A scaffold11731 ScafM SNP 0043.scaffold00157 264594 1 G C scaffold11731 ScafM SNP 0043.scaffold00157 264642 1 C T scaffold11731 ScafM SNP 0043.scaffold00157 264684 1 C A scaffold11731 ScafM SNP 0043.scaffold00157 264706 1 C T scaffold11731 ScafM SNP 0043.scaffold00157 264735 1 C T scaffold11731 ScafM SNP 0043.scaffold00157 264742 1 C T scaffold11731 ScafM SNP 0043.scaffold00157 264757 1 G C scaffold11731 ScafM INDEL 0043.scaffold00157 267517 2 AA .. scaffold13385 ScafM SNP 0043.scaffold00157 267529 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 267546 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 267597 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 267618 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 267626 2 TC CT scaffold13385 ScafM SNP 0043.scaffold00157 267635 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 267640 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 267650 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 267681 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 267709 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 267724 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 267769 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 267788 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 267808 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 267814 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 267831 2 TT CC scaffold13385 ScafM SNP 0043.scaffold00157 267850 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 267859 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 267876 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 267882 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 267898 1 A G scaffold13385 ScafM INDEL 0043.scaffold00157 267920 2 GC .. scaffold13385 ScafM INDEL 0043.scaffold00157 267959 1 A . scaffold13385 ScafM SNP 0043.scaffold00157 267963 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 267978 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 268005 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 268030 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 268054 2 TA AT scaffold13385 ScafM SNP 0043.scaffold00157 270044 1 T C scaffold93 ScafM SNP 0043.scaffold00157 270048 1 A G scaffold93 ScafM SNP 0043.scaffold00157 270051 1 A T scaffold93 ScafM SNP 0043.scaffold00157 270054 1 C A scaffold93 ScafM SNP 0043.scaffold00157 270068 1 A G scaffold93 ScafM SNP 0043.scaffold00157 270070 2 TA CG scaffold93 ScafM SNP 0043.scaffold00157 270074 1 C A scaffold93 ScafM SNP 0043.scaffold00157 270076 1 A G scaffold93 ScafM SNP 0043.scaffold00157 270085 1 T A scaffold93 ScafM SNP 0043.scaffold00157 270107 1 G T scaffold93 ScafM SNP 0043.scaffold00157 270109 1 G A scaffold93 ScafM SNP 0043.scaffold00157 270116 1 C T scaffold93 ScafM SNP 0043.scaffold00157 270144 1 A G scaffold93 ScafM INDEL 0043.scaffold00157 270155 3 GAT ... scaffold93 ScafM INDEL 0043.scaffold00157 270160 1 T . scaffold93 ScafM SNP 0043.scaffold00157 270175 1 G A scaffold93 ScafM SNP 0043.scaffold00157 270177 1 C T scaffold93 ScafM SNP 0043.scaffold00157 270183 1 T A scaffold93 ScafM SNP 0043.scaffold00157 270188 1 T C scaffold93 ScafM SNP 0043.scaffold00157 270209 1 A G scaffold93 ScafM SNP 0043.scaffold00157 271056 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 271067 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 271085 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 271108 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 271110 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271151 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 271153 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271169 1 G A scaffold13385 ScafM INDEL 0043.scaffold00157 271186 4 .... TTCT scaffold13385 ScafM SNP 0043.scaffold00157 271188 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 271194 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 271207 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271231 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 271237 2 TA CG scaffold13385 ScafM INDEL 0043.scaffold00157 271243 1 . C scaffold13385 ScafM INDEL 0043.scaffold00157 271246 1 . C scaffold13385 ScafM SNP 0043.scaffold00157 271261 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 271285 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 271314 1 G C scaffold13385 ScafM INDEL 0043.scaffold00157 271342 1 . A scaffold13385 ScafM SNP 0043.scaffold00157 271358 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 271384 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271431 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 271453 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 271459 1 T C scaffold13385 Both SNP 0043.scaffold00157 271519 1 A G scaffold13385 Both SNP 0043.scaffold00157 271530 1 T A scaffold13385 Both SNP 0043.scaffold00157 271558 1 G T scaffold13385 Both SNP 0043.scaffold00157 271619 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 271662 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271673 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 271677 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271689 1 A G scaffold13385 Both SNP 0043.scaffold00157 271733 1 G C scaffold13385 Both INDEL 0043.scaffold00157 271781 1 . A scaffold13385 Both SNP 0043.scaffold00157 271789 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 271804 1 A C scaffold13385 ScafM INDEL 0043.scaffold00157 271810 1 . A scaffold13385 ScafM SNP 0043.scaffold00157 271837 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 271853 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271872 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 271878 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 271887 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 271923 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 271927 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 271969 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 271990 2 TC GT scaffold13385 Both SNP 0043.scaffold00157 272022 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 272080 2 AG CA scaffold13385 ScafM SNP 0043.scaffold00157 272101 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 272104 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272109 2 AA GC scaffold13385 ScafM INDEL 0043.scaffold00157 272145 1 G . scaffold13385 ScafM SNP 0043.scaffold00157 272149 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 272158 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 272173 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 272178 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272209 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 272212 1 C G scaffold13385 ScafM INDEL 0043.scaffold00157 272247 1 T . scaffold13385 ScafM INDEL 0043.scaffold00157 272261 1 . A scaffold13385 ScafM SNP 0043.scaffold00157 272288 1 G A scaffold13385 ScafM INDEL 0043.scaffold00157 272315 4 .... CACG scaffold13385 ScafM SNP 0043.scaffold00157 272321 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 272334 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 272343 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 272417 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272420 4 TTCG CAAT scaffold13385 ScafM SNP 0043.scaffold00157 272435 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 272460 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272464 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 272466 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 272481 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 272505 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 272517 9 CTTAAGTAC ......... scaffold13385 ScafM INDEL 0043.scaffold00157 272528 1 C . scaffold13385 ScafM INDEL 0043.scaffold00157 272531 8 CCTGAAAT ........ scaffold13385 ScafM INDEL 0043.scaffold00157 272547 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 272552 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 272556 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 272560 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 272570 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 272578 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272614 1 G A scaffold13385 ScafM INDEL 0043.scaffold00157 272686 10 .......... AGACATTGAT scaffold13385 ScafM INDEL 0043.scaffold00157 272688 3 ... CGT scaffold13385 ScafM INDEL 0043.scaffold00157 272689 7 ....... TAAAAAA scaffold13385 ScafM INDEL 0043.scaffold00157 272693 8 ........ CAACTTTG scaffold13385 ScafM INDEL 0043.scaffold00157 272694 5 ..... AAGCA scaffold13385 ScafM SNP 0043.scaffold00157 272699 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272722 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 272729 1 T . scaffold13385 ScafM SNP 0043.scaffold00157 272745 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 272747 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 272792 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 272796 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 272810 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 272825 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 272833 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 272860 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 272882 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 272895 1 C A scaffold13385 ScafM INDEL 0043.scaffold00157 272917 16 ................ TTGACTCTGGCAATTT scaffold13385 ScafM INDEL 0043.scaffold00157 272919 4 .... TAGA scaffold13385 ScafM SNP 0043.scaffold00157 272949 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 272955 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 273002 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 273004 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 273011 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273014 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273038 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273053 1 A G scaffold13385 ScafM INDEL 0043.scaffold00157 273093 1 A . scaffold13385 ScafM INDEL 0043.scaffold00157 273097 1 . G scaffold13385 ScafM SNP 0043.scaffold00157 273119 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273135 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273147 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273157 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 273166 3 ... ATT scaffold13385 ScafM SNP 0043.scaffold00157 273187 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 273204 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 273212 3 TAA ATG scaffold13385 ScafM SNP 0043.scaffold00157 273234 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273250 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 273254 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 273258 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 273319 2 GC TT scaffold13385 ScafM INDEL 0043.scaffold00157 273327 1 . G scaffold13385 ScafM SNP 0043.scaffold00157 273339 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273343 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 273347 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273364 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 273366 2 AA CT scaffold13385 ScafM SNP 0043.scaffold00157 273371 1 G T scaffold13385 ScafM INDEL 0043.scaffold00157 273379 1 T . scaffold13385 ScafM SNP 0043.scaffold00157 273386 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 273394 1 G T scaffold13385 ScafM INDEL 0043.scaffold00157 273395 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 273414 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 273434 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273444 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 273448 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273451 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273459 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273461 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273516 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273520 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 273531 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 273552 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 273555 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273572 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 273581 1 A G scaffold13385 ScafM INDEL 0043.scaffold00157 273585 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 273587 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 273595 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273598 1 G T scaffold13385 ScafM INDEL 0043.scaffold00157 273615 2 GT .. scaffold13385 ScafM INDEL 0043.scaffold00157 273621 1 C . scaffold13385 ScafM SNP 0043.scaffold00157 273625 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273645 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 273654 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273661 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273684 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 273733 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273741 2 AG GC scaffold13385 ScafM SNP 0043.scaffold00157 273747 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 273752 1 T G scaffold13385 ScafM INDEL 0043.scaffold00157 273792 1 . G scaffold13385 ScafM SNP 0043.scaffold00157 273806 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 273809 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 273820 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 273831 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 273845 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 273864 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 273873 2 TA CC scaffold13385 ScafM SNP 0043.scaffold00157 273886 2 TT GC scaffold13385 ScafM SNP 0043.scaffold00157 273911 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 273933 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 273946 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 274002 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 274015 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 274036 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 274063 2 CT TG scaffold13385 ScafM SNP 0043.scaffold00157 274074 1 C T scaffold13385 ScafM INDEL 0043.scaffold00157 274088 1 . A scaffold13385 ScafM INDEL 0043.scaffold00157 274089 1 . G scaffold13385 ScafM SNP 0043.scaffold00157 274094 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 274122 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 274124 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 274144 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 274148 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 274150 2 GT AC scaffold13385 ScafM SNP 0043.scaffold00157 274176 1 C G scaffold13385 ScafM INDEL 0043.scaffold00157 274184 1 . C scaffold13385 ScafM SNP 0043.scaffold00157 274186 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 274198 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 274201 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 274203 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 274208 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 274233 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 274256 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 274269 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 274300 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 274305 1 . T scaffold13385 ScafM INDEL 0043.scaffold00157 274306 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 274355 1 T G scaffold13385 ScafM INDEL 0043.scaffold00157 274399 3 GCA ... scaffold13385 ScafM SNP 0043.scaffold00157 274446 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 274469 2 AT TC scaffold13385 ScafM SNP 0043.scaffold00157 274507 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 274523 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 274529 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 274533 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 274574 2 TT .. scaffold13385 ScafM SNP 0043.scaffold00157 274618 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 274620 1 C A scaffold13385 ScafM INDEL 0043.scaffold00157 274630 5 CCAGG ..... scaffold13385 ScafM SNP 0043.scaffold00157 274652 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 274657 1 C T scaffold13385 ScafM INDEL 0043.scaffold00157 274676 2 .A TT scaffold13385 ScafM SNP 0043.scaffold00157 274699 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 274703 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 274718 1 T A scaffold13385 ScafM INDEL 0043.scaffold00157 274739 7 ....... CTTAAAA scaffold13385 Both SNP 0043.scaffold00157 274801 1 G A scaffold13385 Both SNP 0043.scaffold00157 274858 1 A G scaffold13385 Both SNP 0043.scaffold00157 274922 1 A G scaffold13385 Both INDEL 0043.scaffold00157 274955 1 A . scaffold13385 Both SNP 0043.scaffold00157 275002 1 C T scaffold13385 Both SNP 0043.scaffold00157 275032 1 A G scaffold13385 Both SNP 0043.scaffold00157 275105 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 275122 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 275144 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 275158 1 C G scaffold13385 Both SNP 0043.scaffold00157 275571 1 A C scaffold13385 Both SNP 0043.scaffold00157 275660 1 A T scaffold13385 Both SNP 0043.scaffold00157 275763 1 A G scaffold13385 Both SNP 0043.scaffold00157 275779 1 C A scaffold13385 Both SNP 0043.scaffold00157 275788 1 A C scaffold13385 Both SNP 0043.scaffold00157 275803 1 T C scaffold13385 Both SNP 0043.scaffold00157 275893 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 275907 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 275914 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 275944 2 GA AG scaffold13385 ScafM SNP 0043.scaffold00157 275994 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 276028 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 276030 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 276049 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 276081 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 276085 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 276102 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 276118 1 G T scaffold13385 ScafM INDEL 0043.scaffold00157 276126 2 TT .. scaffold13385 ScafM INDEL 0043.scaffold00157 276225 1 A . scaffold13385 ScafM SNP 0043.scaffold00157 276234 2 CT GC scaffold13385 ScafM SNP 0043.scaffold00157 276279 1 G C scaffold13385 ScafM INDEL 0043.scaffold00157 276328 2 .. TA scaffold13385 ScafM SNP 0043.scaffold00157 276357 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 276381 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 276438 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 276446 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 276646 3 CAA TGG scaffold12071 ScafM SNP 0043.scaffold00157 276680 1 T G scaffold12071 ScafM SNP 0043.scaffold00157 276686 1 G A scaffold12071 ScafM SNP 0043.scaffold00157 276697 1 A G scaffold12071 ScafM SNP 0043.scaffold00157 276702 1 A G scaffold12071 ScafM SNP 0043.scaffold00157 276712 1 G A scaffold12071 ScafM SNP 0043.scaffold00157 276716 1 A C scaffold12071 ScafM SNP 0043.scaffold00157 276718 1 A T scaffold12071 ScafM SNP 0043.scaffold00157 276733 2 AC GT scaffold12071 ScafM SNP 0043.scaffold00157 276745 1 C T scaffold12071 ScafM SNP 0043.scaffold00157 276752 1 T C scaffold12071 ScafM SNP 0043.scaffold00157 276759 1 T C scaffold12071 ScafM SNP 0043.scaffold00157 276838 1 T G scaffold13385 ScafM SNP 0043.scaffold00157 276846 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 276849 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 276868 1 A G scaffold13385 ScafM INDEL 0043.scaffold00157 276909 13 AACGGGGTATACG ............. scaffold13385 ScafM INDEL 0043.scaffold00157 276944 1 G . scaffold13385 ScafM INDEL 0043.scaffold00157 276947 1 C . scaffold13385 ScafM INDEL 0043.scaffold00157 276949 2 TG .. scaffold13385 ScafM SNP 0043.scaffold00157 277034 1 G T scaffold13385 ScafM INDEL 0043.scaffold00157 277057 32 ................................ TTATAAAGCTTCCCTTGCCCTCATTAAAGGTC scaffold13385 ScafM SNP 0043.scaffold00157 277086 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 277122 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 277132 1 T G scaffold13385 ScafM INDEL 0043.scaffold00157 277139 6 TTTATA ...... scaffold13385 ScafM INDEL 0043.scaffold00157 277154 1 T . scaffold13385 ScafM SNP 0043.scaffold00157 277222 1 T C scaffold13385 Both SNP 0043.scaffold00157 277420 1 T C scaffold13385 Both INDEL 0043.scaffold00157 277437 1 T . scaffold13385 Both SNP 0043.scaffold00157 277452 1 A C scaffold13385 Both SNP 0043.scaffold00157 277470 1 G T scaffold13385 Both SNP 0043.scaffold00157 277549 1 T G scaffold13385 Both SNP 0043.scaffold00157 277554 1 C T scaffold13385 Both SNP 0043.scaffold00157 277759 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 278576 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 278579 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 278583 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 278588 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 278590 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 278593 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 278610 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 278637 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 278641 2 CA TG scaffold13385 ScafM SNP 0043.scaffold00157 278658 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 278672 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 278683 1 . C scaffold13385 ScafM SNP 0043.scaffold00157 278687 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 278692 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 278697 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 278745 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 278779 2 CA TT scaffold13385 ScafM SNP 0043.scaffold00157 278782 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 278784 2 TT AA scaffold13385 ScafM SNP 0043.scaffold00157 278788 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 278790 2 .. GG scaffold13385 ScafM SNP 0043.scaffold00157 278792 1 A T scaffold13385 ScafM INDEL 0043.scaffold00157 278795 2 .C TG scaffold13385 ScafM INDEL 0043.scaffold00157 278798 2 .G CA scaffold13385 ScafM SNP 0043.scaffold00157 278824 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 278826 1 A G scaffold13385 ScafM INDEL 0043.scaffold00157 278882 1 . G scaffold13385 ScafM SNP 0043.scaffold00157 278887 1 A G scaffold13385 ReadM SNP 0043.scaffold00157 279258 1 C T - Both SNP 0043.scaffold00157 279359 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 279380 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279388 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279396 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 279421 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 279428 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 279449 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 279471 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 279479 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279485 1 T C scaffold13385 Both SNP 0043.scaffold00157 279536 1 A T scaffold13385 Both SNP 0043.scaffold00157 279548 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279594 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279608 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 279635 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279672 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 279677 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 279685 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 279687 1 T A scaffold13385 ScafM SNP 0043.scaffold00157 279710 1 A T scaffold13385 ReadM SNP 0043.scaffold00157 280036 1 G A - ReadM SNP 0043.scaffold00157 280497 1 T C - ReadM SNP 0043.scaffold00157 280503 1 G A - ReadM SNP 0043.scaffold00157 280586 1 T G - ReadM SNP 0043.scaffold00157 280606 1 C T - ReadM SNP 0043.scaffold00157 280647 1 A C - ReadM SNP 0043.scaffold00157 281087 1 A C - ReadM SNP 0043.scaffold00157 281118 1 G T - ScafM SNP 0043.scaffold00157 281853 1 T C scaffold382 ScafM SNP 0043.scaffold00157 281857 2 AT GC scaffold382 ScafM SNP 0043.scaffold00157 281895 1 T C scaffold382 ScafM SNP 0043.scaffold00157 281898 1 T A scaffold382 ScafM INDEL 0043.scaffold00157 281908 1 A . scaffold382 ScafM SNP 0043.scaffold00157 281912 1 A G scaffold382 ScafM SNP 0043.scaffold00157 281915 1 T A scaffold382 ScafM INDEL 0043.scaffold00157 281919 1 A . scaffold382 ScafM SNP 0043.scaffold00157 281930 1 A C scaffold382 ScafM SNP 0043.scaffold00157 281934 1 A T scaffold382 ScafM SNP 0043.scaffold00157 281939 1 A G scaffold382 ScafM SNP 0043.scaffold00157 281942 1 T G scaffold382 ScafM SNP 0043.scaffold00157 281953 2 TT CC scaffold382 ScafM SNP 0043.scaffold00157 281958 1 C T scaffold382 ScafM SNP 0043.scaffold00157 281966 1 T A scaffold382 ScafM SNP 0043.scaffold00157 281970 1 T G scaffold382 ScafM SNP 0043.scaffold00157 281972 1 G A scaffold382 ScafM SNP 0043.scaffold00157 281975 1 C A scaffold382 ScafM SNP 0043.scaffold00157 281987 1 T C scaffold382 ScafM SNP 0043.scaffold00157 282001 1 A G scaffold382 ScafM SNP 0043.scaffold00157 282015 1 A C scaffold382 ScafM SNP 0043.scaffold00157 282017 1 C T scaffold382 ScafM SNP 0043.scaffold00157 282343 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 282373 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 282385 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 282410 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 282412 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 282423 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 282493 2 AC GA scaffold13385 ScafM SNP 0043.scaffold00157 282496 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 282517 1 A C scaffold13385 ScafM SNP 0043.scaffold00157 282521 1 G A scaffold13385 ReadM SNP 0043.scaffold00157 285524 1 T C - ReadM SNP 0043.scaffold00157 285649 1 C G - ReadM SNP 0043.scaffold00157 285671 1 G T - ReadM SNP 0043.scaffold00157 285739 1 G T - ReadM SNP 0043.scaffold00157 285786 1 G A - ReadM SNP 0043.scaffold00157 285891 1 C T - ReadM SNP 0043.scaffold00157 285941 1 T C - ReadM SNP 0043.scaffold00157 285995 1 A G - ScafM SNP 0043.scaffold00157 291728 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 291776 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 291778 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 291789 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 291804 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 291820 1 A C scaffold13385 ScafM INDEL 0043.scaffold00157 291833 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 291836 2 GC AT scaffold13385 ScafM SNP 0043.scaffold00157 292942 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 292948 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 292979 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 293064 2 AT CC scaffold13385 ScafM SNP 0043.scaffold00157 293068 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 293107 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 293133 1 G C scaffold13385 ScafM SNP 0043.scaffold00157 293144 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 293146 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 293152 1 T C scaffold13385 ScafM INDEL 0043.scaffold00157 293163 1 . T scaffold13385 ScafM SNP 0043.scaffold00157 293173 1 T C scaffold13385 ScafM SNP 0043.scaffold00157 293176 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 293210 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 293212 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 293222 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 293269 1 C G scaffold13385 ScafM SNP 0043.scaffold00157 293278 1 C T scaffold13385 ScafM SNP 0043.scaffold00157 293284 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 293291 1 A G scaffold13385 ScafM SNP 0043.scaffold00157 293298 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 293304 1 G T scaffold13385 ScafM SNP 0043.scaffold00157 293331 1 G A scaffold13385 ScafM SNP 0043.scaffold00157 293350 1 A T scaffold13385 ScafM SNP 0043.scaffold00157 293391 1 C A scaffold13385 ScafM SNP 0043.scaffold00157 293416 2 AT CA scaffold13385 ScafM INDEL 0043.scaffold00157 293442 2 CA .. scaffold13385 ScafM SNP 0043.scaffold00157 293451 2 GA TC scaffold13385 ScafM INDEL 0044.scaffold00158 46555 1 . T scaffold1065 ScafM INDEL 0044.scaffold00158 80095 5 ..... GGGTT scaffold9560 ScafM INDEL 0044.scaffold00158 80680 1 T . scaffold9560 ScafM INDEL 0044.scaffold00158 80683 1 G . scaffold9560 ScafM SNP 0044.scaffold00158 84141 1 T A scaffold389 ScafM INDEL 0044.scaffold00158 84678 1 A . scaffold9560 ScafM SNP 0044.scaffold00158 93504 1 A G scaffold9560 ScafM SNP 0044.scaffold00158 136894 1 T C scaffold7910 ScafM SNP 0044.scaffold00158 136960 1 C T scaffold7910 ScafM SNP 0044.scaffold00158 136972 1 T A scaffold7910 ScafM SNP 0044.scaffold00158 136993 1 C A scaffold7910 ScafM SNP 0044.scaffold00158 137023 1 T G scaffold7910 ScafM SNP 0044.scaffold00158 137056 1 A G scaffold7910 ScafM SNP 0044.scaffold00158 137065 1 A G scaffold7910 ScafM SNP 0044.scaffold00158 137136 1 T A scaffold7910 ScafM SNP 0044.scaffold00158 137147 1 C A scaffold7910 ScafM SNP 0044.scaffold00158 137170 1 T C scaffold7910 ReadM SNP 0044.scaffold00158 138472 1 G A - ScafM INDEL 0044.scaffold00158 140553 1 A . scaffold7910 ScafM INDEL 0044.scaffold00158 166487 2 CT .. scaffold7573 ScafM INDEL 0044.scaffold00158 166498 14 ATCTAAAATGTATG .............. scaffold7573 ReadM INDEL 0044.scaffold00158 170982 3 AAC ... - ReadM SNP 0044.scaffold00158 171924 1 C G - ScafM SNP 0044.scaffold00158 172666 1 A G scaffold7573 ScafM SNP 0044.scaffold00158 190882 1 A T scaffold31083 ScafM SNP 0044.scaffold00158 190952 1 A T scaffold31083 ScafM SNP 0044.scaffold00158 190954 1 G A scaffold31083 ScafM SNP 0044.scaffold00158 190967 1 C T scaffold31083 ScafM SNP 0044.scaffold00158 190996 1 A T scaffold31083 ScafM SNP 0044.scaffold00158 191023 1 G T scaffold31083 ScafM SNP 0044.scaffold00158 191054 1 A G scaffold31083 ScafM SNP 0044.scaffold00158 191132 1 A T scaffold31083 ScafM SNP 0044.scaffold00158 191232 1 G C scaffold31083 ScafM SNP 0044.scaffold00158 191234 1 G C scaffold31083 ScafM SNP 0044.scaffold00158 191237 1 G A scaffold31083 ReadM INDEL 0044.scaffold00158 195068 1 T . - ScafM SNP 0044.scaffold00158 195681 1 T C scaffold1708 ScafM INDEL 0044.scaffold00158 195689 1 T . scaffold1708 ScafM SNP 0044.scaffold00158 195746 1 A G scaffold1708 ScafM SNP 0044.scaffold00158 212562 1 T G scaffold5683 ScafM SNP 0044.scaffold00158 214644 1 C G scaffold5683 ScafM SNP 0044.scaffold00158 268436 1 A G scaffold42628 ScafM SNP 0044.scaffold00158 280314 1 C A scaffold4272 ScafM SNP 0044.scaffold00158 280432 1 C A scaffold4272 Both INDEL 0044.scaffold00158 280632 2 GT .. scaffold4272 ReadM INDEL 0044.scaffold00158 280718 1 G . - Both INDEL 0044.scaffold00158 280720 1 G . scaffold4272 ScafM SNP 0044.scaffold00158 280809 1 T A scaffold4272 ScafM SNP 0044.scaffold00158 280815 1 C T scaffold4272 ScafM SNP 0044.scaffold00158 281044 1 A T scaffold4272 ScafM SNP 0044.scaffold00158 281281 1 C T scaffold4272 ScafM SNP 0044.scaffold00158 281429 1 A G scaffold4272 ScafM INDEL 0044.scaffold00158 281709 1 A . scaffold4272 ScafM SNP 0044.scaffold00158 290967 1 A G scaffold9458 ScafM SNP 0044.scaffold00158 291410 2 CA TG scaffold9458 ScafM SNP 0044.scaffold00158 291416 1 T G scaffold9458 ScafM SNP 0044.scaffold00158 312917 1 A C scaffold33125 ScafM INDEL 0044.scaffold00158 313727 1 . A scaffold33125 ScafM INDEL 0044.scaffold00158 329044 1 T . scaffold6258 ScafM SNP 0044.scaffold00158 343542 1 A C scaffold6258 ScafM INDEL 0044.scaffold00158 354923 63 ............................................................... AACAATTTGAACTGATTAAAAATAACTTAAATAAAAACAAGTTGATTGCACTCACTTATTAGA scaffold34265 ReadM INDEL 0044.scaffold00158 363102 2 AA .. - ScafM SNP 0044.scaffold00158 363206 1 C A scaffold17901 ScafM INDEL 0044.scaffold00158 363220 1 A . scaffold17901 ScafM SNP 0044.scaffold00158 363225 1 A T scaffold17901 ScafM SNP 0044.scaffold00158 363238 1 G A scaffold17901 ScafM SNP 0044.scaffold00158 363243 1 C A scaffold17901 ScafM SNP 0044.scaffold00158 363281 1 G A scaffold17901 ScafM INDEL 0044.scaffold00158 363306 1 . A scaffold17901 ScafM SNP 0044.scaffold00158 363308 1 T A scaffold17901 ScafM SNP 0044.scaffold00158 363321 1 G C scaffold17901 ScafM SNP 0044.scaffold00158 363389 1 C A scaffold17901 ScafM INDEL 0044.scaffold00158 363408 1 . A scaffold17901 ScafM SNP 0044.scaffold00158 363427 1 C T scaffold17901 ScafM INDEL 0044.scaffold00158 363454 1 . A scaffold17901 ScafM INDEL 0044.scaffold00158 363456 3 ... GAA scaffold17901 ScafM INDEL 0044.scaffold00158 363458 6 ...... TAATTA scaffold17901 ScafM SNP 0044.scaffold00158 363460 1 G A scaffold17901 ScafM SNP 0044.scaffold00158 363507 1 A G scaffold17901 ScafM SNP 0044.scaffold00158 363531 1 T C scaffold17901 ScafM SNP 0044.scaffold00158 363602 1 G C scaffold17901 ScafM SNP 0044.scaffold00158 363604 1 A T scaffold17901 ScafM SNP 0044.scaffold00158 363640 1 G C scaffold17901 ScafM SNP 0044.scaffold00158 363657 1 T A scaffold17901 ScafM SNP 0044.scaffold00158 363712 1 A G scaffold17901 ScafM SNP 0044.scaffold00158 363716 1 T C scaffold17901 ScafM SNP 0044.scaffold00158 363744 1 C A scaffold17901 ScafM SNP 0044.scaffold00158 363815 1 T C scaffold17901 ScafM SNP 0044.scaffold00158 363821 1 T C scaffold17901 ScafM SNP 0044.scaffold00158 363848 1 G C scaffold17901 ScafM INDEL 0044.scaffold00158 363896 1 A . scaffold17901 ScafM SNP 0044.scaffold00158 363914 1 G A scaffold17901 ScafM SNP 0044.scaffold00158 363923 1 C A scaffold17901 Both INDEL 0044.scaffold00158 378879 1 C . scaffold8019 ScafM SNP 0044.scaffold00158 402686 1 C T scaffold8019 ScafM SNP 0044.scaffold00158 402693 1 C T scaffold8019 ScafM INDEL 0044.scaffold00158 402722 1 A . scaffold8019 ScafM SNP 0044.scaffold00158 403084 1 T G scaffold8019 ScafM SNP 0044.scaffold00158 462263 1 C T scaffold24997 ScafM SNP 0044.scaffold00158 462273 1 A G scaffold24997 ScafM SNP 0044.scaffold00158 462280 1 C T scaffold24997 ScafM SNP 0044.scaffold00158 462305 1 T C scaffold24997 ScafM SNP 0044.scaffold00158 462352 1 A G scaffold24997 ScafM INDEL 0044.scaffold00158 462387 2 AA .. scaffold24997 ScafM SNP 0044.scaffold00158 462414 1 G A scaffold24997 ScafM SNP 0044.scaffold00158 464094 1 T C scaffold9428 ScafM SNP 0044.scaffold00158 464099 1 C A scaffold9428 ScafM INDEL 0044.scaffold00158 464103 3 TTT ... scaffold9428 ScafM INDEL 0044.scaffold00158 465658 3 CGT ... scaffold9428 ScafM INDEL 0044.scaffold00158 465668 1 T . scaffold9428 ScafM INDEL 0044.scaffold00158 465683 1 T . scaffold9428 ScafM SNP 0044.scaffold00158 465699 1 A C scaffold9428 ScafM SNP 0044.scaffold00158 528834 1 T C scaffold25163 ReadM SNP 0044.scaffold00158 554615 1 A T - ScafM SNP 0044.scaffold00158 563877 1 A G scaffold7705 ScafM SNP 0044.scaffold00158 563900 1 C T scaffold7705 ScafM SNP 0044.scaffold00158 563952 1 G A scaffold7705 ScafM INDEL 0044.scaffold00158 564018 1 T . scaffold7705 ScafM INDEL 0044.scaffold00158 566271 1 . T scaffold8930 ReadM INDEL 0044.scaffold00158 566781 1 . T - ReadM INDEL 0044.scaffold00158 567513 1 . T - ScafM SNP 0044.scaffold00158 570223 1 G A scaffold8930 ScafM SNP 0044.scaffold00158 570267 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 570275 2 TT CC scaffold8930 ScafM SNP 0044.scaffold00158 570285 1 G A scaffold8930 ScafM INDEL 0044.scaffold00158 570466 1 . T scaffold8930 ScafM SNP 0044.scaffold00158 570477 1 A T scaffold8930 ScafM SNP 0044.scaffold00158 570505 1 T A scaffold8930 ReadM INDEL 0044.scaffold00158 570692 1 . T - ScafM INDEL 0044.scaffold00158 570692 1 . A scaffold8930 ScafM SNP 0044.scaffold00158 571261 1 C T scaffold8930 ScafM INDEL 0044.scaffold00158 571353 3 ... TTT scaffold8930 ScafM SNP 0044.scaffold00158 571673 1 A C scaffold8930 ScafM SNP 0044.scaffold00158 571855 1 A C scaffold8930 ScafM SNP 0044.scaffold00158 571910 1 T A scaffold8930 ScafM SNP 0044.scaffold00158 571914 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 571922 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 571943 1 A T scaffold8930 ScafM SNP 0044.scaffold00158 572170 1 G A scaffold8930 ScafM SNP 0044.scaffold00158 572816 1 G C scaffold8930 ScafM SNP 0044.scaffold00158 572866 1 G A scaffold8930 ScafM SNP 0044.scaffold00158 572916 1 T A scaffold8930 ScafM SNP 0044.scaffold00158 572974 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 572984 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 573006 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 573990 1 A G scaffold8930 ScafM SNP 0044.scaffold00158 574025 1 T C scaffold8930 ScafM SNP 0044.scaffold00158 574060 1 A G scaffold8930 ScafM SNP 0044.scaffold00158 596048 2 GC AA scaffold4358 ScafM SNP 0044.scaffold00158 596052 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 596059 1 C A scaffold4358 ScafM SNP 0044.scaffold00158 596071 2 AC GT scaffold4358 ScafM SNP 0044.scaffold00158 596074 1 T G scaffold4358 ScafM SNP 0044.scaffold00158 596078 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 596085 1 A G scaffold4358 ScafM SNP 0044.scaffold00158 596089 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 596094 1 T A scaffold4358 ScafM INDEL 0044.scaffold00158 596100 1 . A scaffold4358 ScafM SNP 0044.scaffold00158 596106 5 CAAAC TGCGG scaffold4358 ScafM SNP 0044.scaffold00158 596112 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 596124 1 G A scaffold4358 ScafM SNP 0044.scaffold00158 596642 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 598429 1 A G scaffold4358 ScafM SNP 0044.scaffold00158 598458 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 598843 1 A G scaffold4358 ScafM SNP 0044.scaffold00158 598969 1 T C scaffold4358 ScafM SNP 0044.scaffold00158 599332 1 A C scaffold4358 ScafM INDEL 0044.scaffold00158 606654 1 T . scaffold4358 ScafM INDEL 0044.scaffold00158 612768 1 . A scaffold4358 ScafM INDEL 0044.scaffold00158 612857 1 . A scaffold4358 ScafM SNP 0044.scaffold00158 644933 1 C G scaffold4358 ReadM SNP 0044.scaffold00158 645792 1 T C - ScafM SNP 0044.scaffold00158 722840 1 A G scaffold4379 ScafM INDEL 0044.scaffold00158 724991 7 ....... GTGATAA scaffold4379 ScafM SNP 0044.scaffold00158 725017 1 A T scaffold4379 ScafM INDEL 0044.scaffold00158 725067 1 A . scaffold4379 ScafM SNP 0044.scaffold00158 725105 1 A G scaffold4379 ScafM INDEL 0044.scaffold00158 730211 2 .. GT scaffold4379 ScafM INDEL 0044.scaffold00158 757103 1 . T scaffold4379 ScafM SNP 0044.scaffold00158 777190 1 C T scaffold4379 ScafM INDEL 0044.scaffold00158 780554 13 ............. CCCCCCCCCCCCC scaffold4379 ScafM SNP 0044.scaffold00158 792325 1 A T scaffold16557 ScafM SNP 0044.scaffold00158 792328 1 G C scaffold16557 ScafM INDEL 0044.scaffold00158 792359 3 GCT .TG scaffold16557 ScafM SNP 0044.scaffold00158 792368 1 T G scaffold16557 ScafM SNP 0044.scaffold00158 792385 1 G A scaffold16557 ScafM SNP 0044.scaffold00158 792390 1 T C scaffold16557 ScafM SNP 0044.scaffold00158 792458 1 C T scaffold16557 ScafM SNP 0044.scaffold00158 792471 1 T G scaffold16557 ScafM INDEL 0044.scaffold00158 792474 1 T . scaffold16557 ScafM INDEL 0044.scaffold00158 792487 3 ATA ... scaffold16557 ScafM INDEL 0044.scaffold00158 792491 2 TA .. scaffold16557 ScafM SNP 0044.scaffold00158 792506 1 A G scaffold16557 ScafM SNP 0044.scaffold00158 792516 1 G A scaffold16557 ScafM SNP 0044.scaffold00158 792526 1 T C scaffold16557 ScafM INDEL 0044.scaffold00158 792531 4 AGTA .... scaffold16557 ScafM INDEL 0044.scaffold00158 792536 1 A . scaffold16557 ScafM SNP 0044.scaffold00158 792565 1 T G scaffold16557 ScafM SNP 0044.scaffold00158 792581 1 A G scaffold16557 ScafM SNP 0044.scaffold00158 792588 1 G C scaffold16557 ScafM SNP 0044.scaffold00158 792600 1 A G scaffold16557 ScafM SNP 0044.scaffold00158 792605 1 G A scaffold16557 ScafM SNP 0044.scaffold00158 792690 1 A T scaffold24297 ScafM SNP 0044.scaffold00158 792707 1 A G scaffold24297 ScafM SNP 0044.scaffold00158 792723 1 G A scaffold24297 ScafM SNP 0044.scaffold00158 792728 1 G T scaffold24297 ScafM SNP 0044.scaffold00158 792731 1 A T scaffold24297 ScafM SNP 0044.scaffold00158 792759 1 C T scaffold24297 ScafM SNP 0044.scaffold00158 792789 1 G T scaffold24297 ScafM SNP 0044.scaffold00158 792836 1 G T scaffold24297 ScafM SNP 0044.scaffold00158 792929 2 GG AA scaffold24297 ScafM SNP 0044.scaffold00158 805562 1 T C scaffold5414 ScafM INDEL 0044.scaffold00158 819231 23 ....................... GGGGGGCTGGGGGGGGGGGGGGG scaffold5414 ScafM INDEL 0044.scaffold00158 820748 1 A . scaffold5414 ScafM SNP 0044.scaffold00158 827155 1 C A scaffold14551 ScafM SNP 0044.scaffold00158 827261 1 T C scaffold14551 ScafM SNP 0044.scaffold00158 827266 1 A T scaffold14551 ScafM SNP 0044.scaffold00158 844955 1 C G scaffold7253 ScafM SNP 0044.scaffold00158 844969 1 A G scaffold7253 ScafM SNP 0044.scaffold00158 844972 1 C T scaffold7253 ScafM SNP 0044.scaffold00158 844984 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845060 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845073 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845080 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845096 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845122 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845158 1 C T scaffold7253 ScafM SNP 0044.scaffold00158 845165 1 A G scaffold7253 ScafM SNP 0044.scaffold00158 845179 2 CG TT scaffold7253 ScafM SNP 0044.scaffold00158 845223 1 G A scaffold7253 ScafM SNP 0044.scaffold00158 845236 1 G C scaffold7253 ScafM SNP 0044.scaffold00158 845271 2 GG AA scaffold7253 ScafM SNP 0044.scaffold00158 845278 1 C T scaffold7253 ScafM SNP 0044.scaffold00158 845301 1 G A scaffold7253 ScafM SNP 0044.scaffold00158 845357 1 A G scaffold7253 ScafM SNP 0044.scaffold00158 845422 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845436 1 T C scaffold7253 ScafM SNP 0044.scaffold00158 845443 1 A G scaffold7253 ScafM SNP 0044.scaffold00158 845469 1 A G scaffold7253 ScafM SNP 0044.scaffold00158 845485 1 C T scaffold7253 ScafM SNP 0044.scaffold00158 851283 1 A G scaffold310 ScafM INDEL 0044.scaffold00158 854299 74 TGGGGGGGGGGGGGGGGTCTCTTCTTCTCTCTAAAACACATTTTTTCTTATACGTTTGGTCTTCTTTTATTTCT .......................................................................... scaffold310 ScafM INDEL 0044.scaffold00158 859283 2 .. TA scaffold310 ScafM INDEL 0044.scaffold00158 898885 1 . A scaffold3754 ScafM SNP 0044.scaffold00158 918224 1 A G scaffold7390 ScafM SNP 0044.scaffold00158 918247 2 AG GT scaffold7390 ScafM SNP 0044.scaffold00158 918272 1 A G scaffold7390 ScafM SNP 0044.scaffold00158 918278 1 T C scaffold7390 ScafM SNP 0044.scaffold00158 918327 2 CG TA scaffold7390 ScafM SNP 0044.scaffold00158 918398 1 T A scaffold7390 ScafM SNP 0044.scaffold00158 918414 1 A G scaffold7390 ScafM SNP 0044.scaffold00158 918419 1 A G scaffold7390 ReadM SNP 0044.scaffold00158 932986 1 C G - ScafM SNP 0044.scaffold00158 934231 1 G T scaffold26709 ScafM SNP 0044.scaffold00158 960801 1 G T scaffold16117 ScafM SNP 0044.scaffold00158 961117 1 G A scaffold16117 ScafM INDEL 0044.scaffold00158 963537 31 ............................... AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA scaffold16117 ScafM SNP 0044.scaffold00158 963572 1 T A scaffold16117 ScafM INDEL 0044.scaffold00158 963573 4 .... AACT scaffold16117 ScafM SNP 0044.scaffold00158 963580 4 TTAA AATT scaffold16117 ScafM SNP 0044.scaffold00158 971164 1 G A scaffold6373 ScafM SNP 0044.scaffold00158 996480 2 TG CA scaffold6373 ReadM INDEL 0044.scaffold00158 996518 1 A . - ReadM SNP 0045.scaffold00159 18776 1 T A - Both SNP 0045.scaffold00159 29017 1 G A scaffold2474 ReadM SNP 0045.scaffold00159 31271 1 T C - ReadM INDEL 0045.scaffold00159 57316 1 . A - ScafM INDEL 0045.scaffold00159 60898 23 ....................... CTCCCCCCCCCCCCCCCCCCCCC scaffold2474 ScafM SNP 0045.scaffold00159 60901 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 65706 1 . A scaffold2474 ReadM SNP 0045.scaffold00159 75905 1 T A - ReadM INDEL 0045.scaffold00159 93624 1 T . - ScafM INDEL 0045.scaffold00159 108899 12 ............ TTTTTTTTTTTT scaffold2474 ScafM INDEL 0045.scaffold00159 130896 1 . A scaffold2474 Both SNP 0045.scaffold00159 133792 1 T C scaffold2474 Both SNP 0045.scaffold00159 133801 1 T C scaffold2474 Both SNP 0045.scaffold00159 133858 1 T C scaffold2474 Both SNP 0045.scaffold00159 134053 1 A G scaffold2474 Both SNP 0045.scaffold00159 134075 1 A G scaffold2474 Both SNP 0045.scaffold00159 134107 1 G A scaffold2474 Both SNP 0045.scaffold00159 134115 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 134155 2 TT AC scaffold2474 Both SNP 0045.scaffold00159 134233 1 C T scaffold2474 Both SNP 0045.scaffold00159 134245 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 134272 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 134280 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 134290 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 134293 1 G A scaffold2474 Both SNP 0045.scaffold00159 134314 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 134389 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 134394 1 C T scaffold2474 ScafM INDEL 0045.scaffold00159 134398 3 GAA ... scaffold2474 ScafM SNP 0045.scaffold00159 134406 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 134422 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 134425 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 134473 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 134497 1 A C scaffold2474 Both SNP 0045.scaffold00159 134539 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 134563 2 GT AC scaffold2474 ScafM SNP 0045.scaffold00159 134613 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 134675 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 134700 1 . T scaffold2474 ScafM SNP 0045.scaffold00159 134713 1 A C scaffold2474 ScafM INDEL 0045.scaffold00159 134760 1 . T scaffold2474 ScafM SNP 0045.scaffold00159 134799 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 134805 1 A G scaffold2474 ReadM SNP 0045.scaffold00159 135560 1 T C - ReadM SNP 0045.scaffold00159 135602 1 G A - Both SNP 0045.scaffold00159 135894 1 C T scaffold2474 Both SNP 0045.scaffold00159 135917 1 T G scaffold2474 Both SNP 0045.scaffold00159 136024 1 A T scaffold2474 Both SNP 0045.scaffold00159 136050 1 C T scaffold2474 Both SNP 0045.scaffold00159 136094 1 A G scaffold2474 Both SNP 0045.scaffold00159 136140 1 A C scaffold2474 Both SNP 0045.scaffold00159 136163 1 G A scaffold2474 ReadM SNP 0045.scaffold00159 136279 1 T C - ReadM SNP 0045.scaffold00159 136323 1 G A - ReadM SNP 0045.scaffold00159 136401 1 A G - ReadM SNP 0045.scaffold00159 137130 1 C G - ReadM SNP 0045.scaffold00159 137372 1 C T - ReadM INDEL 0045.scaffold00159 137424 1 . A - ScafM SNP 0045.scaffold00159 148713 1 C G scaffold2474 ScafM INDEL 0045.scaffold00159 148750 2 CC .. scaffold2474 ScafM SNP 0045.scaffold00159 148753 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 149110 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 149242 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 149256 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 177944 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 177974 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 177979 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 178044 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 178110 1 G C scaffold2474 ScafM INDEL 0045.scaffold00159 178114 5 CTTAG ..... scaffold2474 ScafM SNP 0045.scaffold00159 178123 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 178133 4 .... CTTT scaffold2474 ScafM SNP 0045.scaffold00159 178155 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 178194 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 178262 1 T A scaffold2474 ScafM INDEL 0045.scaffold00159 178429 1 A . scaffold2474 ScafM INDEL 0045.scaffold00159 178446 1 T . scaffold2474 ScafM SNP 0045.scaffold00159 178778 1 A T scaffold2474 Both SNP 0045.scaffold00159 180420 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 180598 51 ................................................... TTAATTGGTAACTGTTTCTTTATTTGTTGTACGACGTATCTTTTCATTAGG scaffold2474 ScafM INDEL 0045.scaffold00159 180601 6 ...... ACATAA scaffold2474 ScafM INDEL 0045.scaffold00159 180603 6 ...... TTTTTT scaffold2474 ScafM INDEL 0045.scaffold00159 180611 6 ...... GTCTTA scaffold2474 Both INDEL 0045.scaffold00159 180824 1 . T scaffold2474 Both SNP 0045.scaffold00159 181000 1 T A scaffold2474 Both SNP 0045.scaffold00159 181086 1 T C scaffold2474 ReadM SNP 0045.scaffold00159 181216 1 A G - ReadM SNP 0045.scaffold00159 181224 1 A T - ReadM SNP 0045.scaffold00159 181271 1 C T - ReadM SNP 0045.scaffold00159 181311 1 A G - ReadM SNP 0045.scaffold00159 181377 1 G T - ReadM SNP 0045.scaffold00159 181388 1 G A - Both INDEL 0045.scaffold00159 181450 1 . C scaffold2474 Both SNP 0045.scaffold00159 181472 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 181547 1 C T scaffold2474 Both SNP 0045.scaffold00159 181585 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 181659 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 181742 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 181744 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 181748 1 G C scaffold2474 ScafM INDEL 0045.scaffold00159 182354 1 T . scaffold2474 ScafM INDEL 0045.scaffold00159 182427 4 .... AATT scaffold2474 ReadM SNP 0045.scaffold00159 182484 1 T C - ReadM SNP 0045.scaffold00159 182575 1 G T - ScafM SNP 0045.scaffold00159 182684 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 182717 2 GT AG scaffold2474 ScafM INDEL 0045.scaffold00159 182829 6 ...... AAAAGA scaffold2474 ScafM SNP 0045.scaffold00159 182857 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 183087 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 183293 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 183309 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 183325 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 183328 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 183604 1 C T scaffold2474 ScafM INDEL 0045.scaffold00159 183606 1 . T scaffold2474 ScafM SNP 0045.scaffold00159 183624 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 183627 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 183669 7 AGATGCA ....... scaffold2474 ScafM SNP 0045.scaffold00159 183680 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 183825 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 184820 1 T A scaffold2474 ScafM INDEL 0045.scaffold00159 184927 7 ....... GGACTTT scaffold2474 ScafM INDEL 0045.scaffold00159 184975 2 AG .. scaffold2474 ScafM SNP 0045.scaffold00159 184993 2 GG TA scaffold2474 ScafM INDEL 0045.scaffold00159 184995 3 ... TAT scaffold2474 ScafM SNP 0045.scaffold00159 184997 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 184999 1 G T scaffold2474 ScafM INDEL 0045.scaffold00159 185094 21 ..................... GGTATGCTTTAAAAGACTTTG scaffold2474 ScafM SNP 0045.scaffold00159 185133 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 185201 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 185208 2 TA CG scaffold2474 ScafM SNP 0045.scaffold00159 185249 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 186092 1 T A C13508091 ScafM SNP 0045.scaffold00159 186122 1 A G C13508091 ScafM SNP 0045.scaffold00159 186133 2 TC CT C13508091 ScafM SNP 0045.scaffold00159 186156 1 G A C13508091 ReadM SNP 0045.scaffold00159 186330 1 G A - ReadM SNP 0045.scaffold00159 186346 1 G A - ReadM SNP 0045.scaffold00159 186422 1 T A - ReadM SNP 0045.scaffold00159 186428 1 G A - ReadM SNP 0045.scaffold00159 186519 1 A G - ReadM SNP 0045.scaffold00159 186580 1 T C - ReadM SNP 0045.scaffold00159 186641 1 T C - ReadM SNP 0045.scaffold00159 186720 1 G A - ReadM SNP 0045.scaffold00159 186757 1 G C - ReadM SNP 0045.scaffold00159 186787 1 C G - ReadM SNP 0045.scaffold00159 186823 1 C A - ReadM SNP 0045.scaffold00159 186891 1 A G - ReadM SNP 0045.scaffold00159 186909 1 T G - ReadM INDEL 0045.scaffold00159 186955 1 G . - ReadM SNP 0045.scaffold00159 187166 1 C T - ReadM SNP 0045.scaffold00159 187237 1 A C - ReadM SNP 0045.scaffold00159 187280 1 G A - ReadM SNP 0045.scaffold00159 187309 1 C A - ReadM SNP 0045.scaffold00159 187346 1 C T - ReadM SNP 0045.scaffold00159 187381 1 T C - ReadM SNP 0045.scaffold00159 187453 1 C G - ReadM SNP 0045.scaffold00159 187494 1 T C - ReadM SNP 0045.scaffold00159 187587 1 G A - ReadM SNP 0045.scaffold00159 187619 1 G A - ReadM SNP 0045.scaffold00159 187700 1 C T - ReadM SNP 0045.scaffold00159 187917 1 T C - ScafM SNP 0045.scaffold00159 191336 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 191361 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 191417 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 191483 1 T G scaffold2474 ScafM INDEL 0045.scaffold00159 191606 1 T . scaffold2474 ScafM SNP 0045.scaffold00159 191629 1 A T scaffold2474 ReadM SNP 0045.scaffold00159 191822 1 A G - ReadM SNP 0045.scaffold00159 191856 1 C G - ReadM INDEL 0045.scaffold00159 191872 1 A . - ReadM SNP 0045.scaffold00159 192671 1 C T - ReadM SNP 0045.scaffold00159 192685 1 G A - ReadM SNP 0045.scaffold00159 192792 1 T A - ReadM SNP 0045.scaffold00159 192829 1 A G - ReadM SNP 0045.scaffold00159 193059 1 G T - ReadM SNP 0045.scaffold00159 193089 1 G A - ReadM SNP 0045.scaffold00159 193104 1 G A - ReadM SNP 0045.scaffold00159 193922 1 C T - ReadM SNP 0045.scaffold00159 194060 1 A G - ReadM SNP 0045.scaffold00159 194754 2 GG TA - ScafM SNP 0045.scaffold00159 194958 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 194961 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 195881 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 195913 1 T C scaffold2474 Both SNP 0045.scaffold00159 196011 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 196432 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 196445 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 196474 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 196518 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 196538 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 196569 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 196574 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 196579 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 196656 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 196726 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 196731 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 196797 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 196854 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 196915 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 196924 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 196946 5 ..... GGGGT scaffold2474 ScafM SNP 0045.scaffold00159 197025 1 C T scaffold2474 ScafM INDEL 0045.scaffold00159 197028 4 ...A TTTT scaffold2474 ScafM INDEL 0045.scaffold00159 197050 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 197110 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 197120 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 197122 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 197494 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 197539 3 ATA ... scaffold2474 ReadM SNP 0045.scaffold00159 197637 1 G A - ReadM SNP 0045.scaffold00159 197665 1 C T - Both SNP 0045.scaffold00159 198227 1 C T scaffold2474 Both SNP 0045.scaffold00159 198241 1 T C scaffold2474 ReadM SNP 0045.scaffold00159 198415 1 G C - ReadM SNP 0045.scaffold00159 198433 1 A C - ReadM SNP 0045.scaffold00159 198564 1 T A - ReadM SNP 0045.scaffold00159 198614 1 G A - Both SNP 0045.scaffold00159 198630 1 T G scaffold2474 Both SNP 0045.scaffold00159 198742 1 T C scaffold2474 Both SNP 0045.scaffold00159 198763 1 A C scaffold2474 Both SNP 0045.scaffold00159 198778 1 C T scaffold2474 ReadM SNP 0045.scaffold00159 198970 1 G A - ReadM SNP 0045.scaffold00159 199063 1 C T - ReadM SNP 0045.scaffold00159 199089 1 A T - ReadM SNP 0045.scaffold00159 199149 1 A T - ReadM SNP 0045.scaffold00159 199190 1 A G - ReadM SNP 0045.scaffold00159 199223 1 G A - ReadM INDEL 0045.scaffold00159 199411 1 T . - ReadM SNP 0045.scaffold00159 199782 1 A C - ReadM SNP 0045.scaffold00159 199869 1 C G - Both SNP 0045.scaffold00159 200009 1 A G scaffold2474 Both SNP 0045.scaffold00159 200108 1 A T scaffold2474 Both SNP 0045.scaffold00159 200460 1 A G scaffold2474 Both SNP 0045.scaffold00159 200465 1 G A scaffold2474 Both SNP 0045.scaffold00159 200698 1 C T scaffold2474 Both SNP 0045.scaffold00159 200724 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 200805 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 200814 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 200830 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 200839 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 200892 2 CT TA scaffold2474 ScafM SNP 0045.scaffold00159 200904 1 T G scaffold2474 Both SNP 0045.scaffold00159 200928 1 C T scaffold2474 Both SNP 0045.scaffold00159 200948 1 A G scaffold2474 Both SNP 0045.scaffold00159 201088 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 201094 1 A T scaffold2474 ScafM INDEL 0045.scaffold00159 201102 1 C . scaffold2474 ScafM SNP 0045.scaffold00159 201107 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 201119 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 201122 1 . T scaffold2474 ScafM SNP 0045.scaffold00159 201124 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 201129 2 TA AT scaffold2474 ScafM SNP 0045.scaffold00159 201139 1 C A scaffold2474 ScafM SNP 0045.scaffold00159 201150 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 201156 7 ....... TGAACAC scaffold2474 ScafM SNP 0045.scaffold00159 201185 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 201188 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 201196 1 C T scaffold2474 ScafM INDEL 0045.scaffold00159 201208 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 201214 1 T A scaffold2474 Both SNP 0045.scaffold00159 201230 1 C A scaffold2474 Both SNP 0045.scaffold00159 201249 1 T G scaffold2474 Both SNP 0045.scaffold00159 201394 1 A C scaffold2474 ReadM SNP 0045.scaffold00159 201650 1 A G - Both SNP 0045.scaffold00159 201678 1 C T scaffold2474 Both SNP 0045.scaffold00159 201692 1 C A scaffold2474 Both SNP 0045.scaffold00159 201755 1 C A scaffold2474 Both SNP 0045.scaffold00159 201926 1 T C scaffold2474 ReadM SNP 0045.scaffold00159 202283 1 C T - ReadM SNP 0045.scaffold00159 202334 1 G C - ReadM SNP 0045.scaffold00159 202339 1 G C - ReadM SNP 0045.scaffold00159 202355 1 G A - ScafM INDEL 0045.scaffold00159 202415 2 AA .. scaffold2474 Both SNP 0045.scaffold00159 202429 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 202547 1 A T scaffold2474 ScafM INDEL 0045.scaffold00159 202551 6 AGGTAG ...... scaffold2474 ScafM SNP 0045.scaffold00159 202559 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 202561 3 CTA ... scaffold2474 Both SNP 0045.scaffold00159 202651 1 C A scaffold2474 Both SNP 0045.scaffold00159 202719 1 G C scaffold2474 Both SNP 0045.scaffold00159 202834 1 T G scaffold2474 Both SNP 0045.scaffold00159 202886 1 T C scaffold2474 ReadM SNP 0045.scaffold00159 204078 1 T G - ReadM INDEL 0045.scaffold00159 204464 1 A . - ReadM SNP 0045.scaffold00159 204491 1 A C - ReadM SNP 0045.scaffold00159 204753 1 G A - ReadM SNP 0045.scaffold00159 204767 1 T C - ReadM SNP 0045.scaffold00159 205108 1 A C - ReadM SNP 0045.scaffold00159 205117 1 C T - ReadM SNP 0045.scaffold00159 205267 1 G A - ReadM SNP 0045.scaffold00159 205358 1 G A - ReadM SNP 0045.scaffold00159 205364 1 T C - ReadM SNP 0045.scaffold00159 205457 1 C A - ReadM SNP 0045.scaffold00159 206057 1 G A - ReadM SNP 0045.scaffold00159 206067 1 G C - ReadM SNP 0045.scaffold00159 206560 1 A T - ReadM SNP 0045.scaffold00159 206565 1 G A - ReadM SNP 0045.scaffold00159 206648 1 A T - ReadM SNP 0045.scaffold00159 206675 1 G T - Both SNP 0045.scaffold00159 206876 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 206897 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 207213 1 T G scaffold2474 ScafM INDEL 0045.scaffold00159 207277 2 .A TT scaffold2474 ScafM INDEL 0045.scaffold00159 207340 7 CTGCACA ....... scaffold2474 ScafM SNP 0045.scaffold00159 207355 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 207473 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 207494 1 C T scaffold2474 ReadM SNP 0045.scaffold00159 207743 1 A G - ScafM SNP 0045.scaffold00159 207902 1 C T scaffold2474 Both SNP 0045.scaffold00159 208170 1 C T scaffold2474 Both SNP 0045.scaffold00159 208195 1 C A scaffold2474 Both SNP 0045.scaffold00159 208202 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 208230 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 208236 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 208294 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 208304 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 208321 1 . T scaffold2474 Both SNP 0045.scaffold00159 208335 1 A C scaffold2474 Both SNP 0045.scaffold00159 208385 1 T C scaffold2474 Both SNP 0045.scaffold00159 208410 1 G A scaffold2474 Both SNP 0045.scaffold00159 208443 1 A G scaffold2474 Both SNP 0045.scaffold00159 208538 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 208545 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 208551 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 208573 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 208592 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 208625 1 C A scaffold2474 ScafM SNP 0045.scaffold00159 208633 2 GA AC scaffold2474 ScafM SNP 0045.scaffold00159 208637 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 208662 3 TTC ... scaffold2474 ScafM SNP 0045.scaffold00159 208674 2 TA CG scaffold2474 ScafM INDEL 0045.scaffold00159 208687 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 208695 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 208706 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 208715 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 208737 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 208748 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 208762 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 208765 2 CA AG scaffold2474 ScafM INDEL 0045.scaffold00159 208770 1 . C scaffold2474 ScafM INDEL 0045.scaffold00159 208771 2 .. GT scaffold2474 ScafM INDEL 0045.scaffold00159 208789 1 T . scaffold2474 ScafM INDEL 0045.scaffold00159 208804 33 ATAACTCAATATGACGTGGGGATTTTCACCAAC ................................. scaffold2474 ScafM INDEL 0045.scaffold00159 208845 1 T . scaffold2474 ScafM SNP 0045.scaffold00159 208852 1 T A scaffold2474 Both SNP 0045.scaffold00159 208899 1 A G scaffold2474 Both SNP 0045.scaffold00159 208935 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 208967 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 208971 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 208976 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 208998 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 209010 2 AG .. scaffold2474 ScafM INDEL 0045.scaffold00159 209016 1 C . scaffold2474 ScafM INDEL 0045.scaffold00159 209020 3 ATA ... scaffold2474 ScafM INDEL 0045.scaffold00159 209024 1 A . scaffold2474 Both INDEL 0045.scaffold00159 209105 2 GA .. scaffold2474 ScafM INDEL 0045.scaffold00159 209175 3 ... ATC scaffold2474 ScafM SNP 0045.scaffold00159 209189 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 209224 2 AC .. scaffold2474 ScafM SNP 0045.scaffold00159 209234 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 209263 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 209277 1 C A scaffold2474 ScafM INDEL 0045.scaffold00159 209304 8 TATAAAGA ........ scaffold2474 ScafM INDEL 0045.scaffold00159 209315 3 GAG ... scaffold2474 ScafM SNP 0045.scaffold00159 209319 1 G T scaffold2474 ScafM SNP 0045.scaffold00159 209321 1 C T scaffold2474 Both SNP 0045.scaffold00159 209388 1 T C scaffold2474 Both SNP 0045.scaffold00159 209656 1 T C scaffold2474 Both SNP 0045.scaffold00159 209663 1 T C scaffold2474 Both SNP 0045.scaffold00159 209684 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 209735 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 209742 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 209755 3 CGT ... scaffold2474 ScafM INDEL 0045.scaffold00159 209760 2 TC .. scaffold2474 ScafM SNP 0045.scaffold00159 209775 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 209816 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 209822 4 TCTC .... scaffold2474 ScafM SNP 0045.scaffold00159 209840 1 C G scaffold2474 Both SNP 0045.scaffold00159 209867 1 G A scaffold2474 Both SNP 0045.scaffold00159 209909 1 G A scaffold2474 Both INDEL 0045.scaffold00159 209959 2 .. AA scaffold2474 ScafM INDEL 0045.scaffold00159 209994 5 TCATA ..... scaffold2474 ScafM INDEL 0045.scaffold00159 210000 3 TCT ... scaffold2474 Both INDEL 0045.scaffold00159 210094 1 A . scaffold2474 Both SNP 0045.scaffold00159 210133 1 A C scaffold2474 Both SNP 0045.scaffold00159 210150 1 T C scaffold2474 Both SNP 0045.scaffold00159 210247 1 C T scaffold2474 Both SNP 0045.scaffold00159 210252 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 210296 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 210340 2 AA .. scaffold2474 ScafM SNP 0045.scaffold00159 210345 2 TA CG scaffold2474 ScafM INDEL 0045.scaffold00159 210363 8 ........ TCAATCTT scaffold2474 ScafM INDEL 0045.scaffold00159 210364 1 . A scaffold2474 ScafM SNP 0045.scaffold00159 210373 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 210396 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 210401 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 210451 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 210473 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 210478 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 210940 1 T G scaffold2474 ScafM SNP 0045.scaffold00159 210999 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 211005 1 C T scaffold2474 Both SNP 0045.scaffold00159 211158 1 G A scaffold2474 Both SNP 0045.scaffold00159 211195 1 G C scaffold2474 Both SNP 0045.scaffold00159 211222 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 211246 1 T A scaffold2474 ScafM INDEL 0045.scaffold00159 211249 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 211255 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 211277 2 CG TT scaffold2474 Both SNP 0045.scaffold00159 211283 1 T C scaffold2474 Both SNP 0045.scaffold00159 211418 1 A G scaffold2474 Both SNP 0045.scaffold00159 211445 1 A G scaffold2474 Both SNP 0045.scaffold00159 211458 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 211488 1 T C scaffold2474 Both SNP 0045.scaffold00159 211514 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 211608 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 211610 1 C A scaffold2474 ScafM SNP 0045.scaffold00159 211668 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 211676 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 211686 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 211689 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 211692 1 A G scaffold2474 Both SNP 0045.scaffold00159 211767 1 A G scaffold2474 Both SNP 0045.scaffold00159 211786 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 211826 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 211836 2 AA GT scaffold2474 ScafM SNP 0045.scaffold00159 211857 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 211871 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 211912 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 211916 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 211918 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 211927 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 211936 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 211944 1 G A scaffold2474 Both SNP 0045.scaffold00159 212041 1 T C scaffold2474 Both SNP 0045.scaffold00159 212066 1 G A scaffold2474 Both SNP 0045.scaffold00159 212100 1 G A scaffold2474 Both SNP 0045.scaffold00159 212184 1 C T scaffold2474 Both SNP 0045.scaffold00159 212226 1 A C scaffold2474 Both INDEL 0045.scaffold00159 212240 1 . G scaffold2474 Both SNP 0045.scaffold00159 212294 1 A G scaffold2474 Both SNP 0045.scaffold00159 212328 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 212340 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 212371 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 212391 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 212416 1 A G scaffold2474 ScafM INDEL 0045.scaffold00159 212431 1 . A scaffold2474 ScafM INDEL 0045.scaffold00159 212435 1 . T scaffold2474 Both SNP 0045.scaffold00159 212562 1 G A scaffold2474 Both SNP 0045.scaffold00159 212640 1 G A scaffold2474 Both SNP 0045.scaffold00159 212661 1 G A scaffold2474 Both SNP 0045.scaffold00159 212665 1 A G scaffold2474 Both INDEL 0045.scaffold00159 212734 1 A . scaffold2474 Both SNP 0045.scaffold00159 212781 1 C G scaffold2474 Both SNP 0045.scaffold00159 212881 1 T C scaffold2474 Both INDEL 0045.scaffold00159 212889 1 T . scaffold2474 ScafM SNP 0045.scaffold00159 212937 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 212946 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 212971 2 GG TA scaffold2474 ScafM SNP 0045.scaffold00159 212976 1 G A scaffold2474 Both SNP 0045.scaffold00159 212985 1 C T scaffold2474 Both SNP 0045.scaffold00159 213046 1 T G scaffold2474 Both SNP 0045.scaffold00159 213107 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 213119 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 213125 1 A C scaffold2474 Both SNP 0045.scaffold00159 213142 1 C T scaffold2474 Both SNP 0045.scaffold00159 213208 1 G C scaffold2474 Both SNP 0045.scaffold00159 213222 1 A C scaffold2474 Both SNP 0045.scaffold00159 213333 1 C A scaffold2474 Both SNP 0045.scaffold00159 213345 1 A C scaffold2474 ScafM INDEL 0045.scaffold00159 213380 17 AAAAAAAAAAAAAACCT ................. scaffold2474 ScafM INDEL 0045.scaffold00159 213399 2 GG .. scaffold2474 ScafM INDEL 0045.scaffold00159 213408 2 GT .A scaffold2474 ScafM SNP 0045.scaffold00159 213438 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 213452 1 C T scaffold2474 Both SNP 0045.scaffold00159 213478 1 G T scaffold2474 Both SNP 0045.scaffold00159 213491 1 A C scaffold2474 Both INDEL 0045.scaffold00159 213545 1 . T scaffold2474 ScafM SNP 0045.scaffold00159 213556 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 213593 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 213595 1 C A scaffold2474 ScafM INDEL 0045.scaffold00159 213631 3 CTA ... scaffold2474 ScafM INDEL 0045.scaffold00159 213637 5 GCAAT ..... scaffold2474 Both SNP 0045.scaffold00159 213669 1 T C scaffold2474 Both SNP 0045.scaffold00159 213684 1 G C scaffold2474 Both SNP 0045.scaffold00159 213729 1 C G scaffold2474 ScafM INDEL 0045.scaffold00159 213776 8 AACTACGC ........ scaffold2474 ScafM SNP 0045.scaffold00159 213813 1 G C scaffold2474 ScafM SNP 0045.scaffold00159 213827 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 213832 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 213835 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 213848 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 213875 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 213877 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 213880 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 213886 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 213945 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 213948 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 213961 2 TT AA scaffold2474 ScafM INDEL 0045.scaffold00159 214008 8 ........ TGACAAAC scaffold2474 ScafM INDEL 0045.scaffold00159 214010 2 .. TT scaffold2474 ScafM INDEL 0045.scaffold00159 214047 3 AAA ... scaffold2474 ScafM SNP 0045.scaffold00159 214136 1 C T scaffold2474 ScafM INDEL 0045.scaffold00159 214140 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 214145 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 214159 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 214170 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 214182 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 214188 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 214209 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 214214 1 C G scaffold2474 ScafM SNP 0045.scaffold00159 214227 1 T A scaffold2474 ScafM SNP 0045.scaffold00159 214232 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 214240 1 T C scaffold2474 ScafM INDEL 0045.scaffold00159 214274 8 AATTGAAT ........ scaffold2474 ScafM SNP 0045.scaffold00159 214293 1 A C scaffold2474 ScafM INDEL 0045.scaffold00159 214302 2 .T AA scaffold2474 ScafM INDEL 0045.scaffold00159 214329 1 . A scaffold2474 ScafM INDEL 0045.scaffold00159 214384 1 . A scaffold2474 ScafM SNP 0045.scaffold00159 214444 1 G T scaffold2474 ScafM INDEL 0045.scaffold00159 214587 8 ........ TGAGGGTT scaffold2474 ScafM SNP 0045.scaffold00159 214639 1 T G scaffold2474 ScafM INDEL 0045.scaffold00159 214663 9 TTGACCTGT ......... scaffold2474 ScafM SNP 0045.scaffold00159 214682 1 C T scaffold2474 ScafM SNP 0045.scaffold00159 214695 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 214698 1 C A scaffold2474 ScafM INDEL 0045.scaffold00159 214703 1 A . scaffold2474 ScafM SNP 0045.scaffold00159 214718 1 A C scaffold2474 ScafM INDEL 0045.scaffold00159 214724 3 TCT ... scaffold2474 ScafM SNP 0045.scaffold00159 214734 1 G A scaffold2474 ScafM INDEL 0045.scaffold00159 214740 1 G . scaffold2474 ScafM INDEL 0045.scaffold00159 214744 1 . A scaffold2474 ScafM SNP 0045.scaffold00159 214751 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 214763 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 214773 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 216335 1 A C scaffold2474 ScafM SNP 0045.scaffold00159 216347 1 G A scaffold2474 ScafM SNP 0045.scaffold00159 216360 1 T C scaffold2474 ScafM SNP 0045.scaffold00159 216366 1 A G scaffold2474 ScafM SNP 0045.scaffold00159 216420 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 216427 1 A T scaffold2474 ScafM SNP 0045.scaffold00159 217040 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 217043 1 T C scaffold10370 ScafM INDEL 0045.scaffold00159 217060 4 CTAG .... scaffold10370 ScafM SNP 0045.scaffold00159 217078 2 CA TG scaffold10370 ScafM SNP 0045.scaffold00159 217100 3 CTA TCG scaffold10370 ScafM INDEL 0045.scaffold00159 217167 1 . T scaffold10370 ScafM SNP 0045.scaffold00159 217170 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 217175 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 217209 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 217214 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 217222 1 T C scaffold10370 ScafM INDEL 0045.scaffold00159 217228 5 TATAA ..... scaffold10370 ScafM SNP 0045.scaffold00159 217239 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217245 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 217248 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 217386 1 A G scaffold10370 ScafM INDEL 0045.scaffold00159 217389 1 A . scaffold10370 ScafM INDEL 0045.scaffold00159 217392 1 A . scaffold10370 ScafM INDEL 0045.scaffold00159 217394 1 G . scaffold10370 ScafM INDEL 0045.scaffold00159 217409 2 .A CT scaffold10370 ScafM SNP 0045.scaffold00159 217413 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 217422 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 217427 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 217431 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217434 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217439 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217443 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217474 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217493 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217498 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 217507 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 217544 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 217565 4 .... GGCC scaffold10370 ScafM SNP 0045.scaffold00159 217591 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 217596 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 217626 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 217628 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 217637 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 217674 1 A T scaffold10370 ScafM INDEL 0045.scaffold00159 217682 3 ... GGA scaffold10370 ScafM SNP 0045.scaffold00159 217690 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 224342 2 CG TT scaffold10370 ScafM SNP 0045.scaffold00159 224346 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 233558 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 233603 1 A G scaffold10370 ScafM INDEL 0045.scaffold00159 233630 5 GCATT ..... scaffold10370 ScafM SNP 0045.scaffold00159 233644 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 233688 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 233691 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 233703 1 . C scaffold10370 ScafM SNP 0045.scaffold00159 235325 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 235328 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 235333 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 235360 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 235504 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 235546 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 235565 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 235569 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 235613 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 235620 2 AA .. scaffold10370 ScafM SNP 0045.scaffold00159 235649 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 235651 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 235655 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 235673 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 235732 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 235750 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 235759 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 235944 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 235981 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 235990 11 GAAGCAAAGAA ........... scaffold10370 ScafM INDEL 0045.scaffold00159 236002 4 TCCC .... scaffold10370 ScafM INDEL 0045.scaffold00159 236007 1 A . scaffold10370 ScafM INDEL 0045.scaffold00159 236009 5 AACCC ..... scaffold10370 ScafM INDEL 0045.scaffold00159 236016 4 AGGT .... scaffold10370 ScafM SNP 0045.scaffold00159 236021 1 C G scaffold10370 ScafM INDEL 0045.scaffold00159 236025 1 T . scaffold10370 ScafM SNP 0045.scaffold00159 236027 1 C A scaffold10370 ScafM INDEL 0045.scaffold00159 236029 8 CTTGTGCT ........ scaffold10370 ScafM SNP 0045.scaffold00159 236043 1 A C scaffold10370 Both SNP 0045.scaffold00159 236137 1 C T scaffold10370 ReadM SNP 0045.scaffold00159 237040 1 A T - Both SNP 0045.scaffold00159 237394 1 A G scaffold10370 Both SNP 0045.scaffold00159 237478 1 G A scaffold10370 Both SNP 0045.scaffold00159 237721 1 C G scaffold10370 Both SNP 0045.scaffold00159 237795 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 237847 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 237862 1 A G scaffold10370 Both SNP 0045.scaffold00159 237974 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 238032 2 TT AC scaffold10370 ScafM SNP 0045.scaffold00159 238041 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 238048 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 238674 1 G C scaffold10370 Both SNP 0045.scaffold00159 238688 1 C T scaffold10370 Both SNP 0045.scaffold00159 238716 1 T A scaffold10370 Both SNP 0045.scaffold00159 238835 1 A G scaffold10370 Both SNP 0045.scaffold00159 238871 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 238889 1 G A scaffold10370 Both SNP 0045.scaffold00159 238920 1 G C scaffold10370 ScafM INDEL 0045.scaffold00159 239387 3 ... CTT scaffold10370 ScafM INDEL 0045.scaffold00159 239388 1 . T scaffold10370 ScafM SNP 0045.scaffold00159 239436 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 239459 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 239490 1 G C scaffold10370 ScafM SNP 0045.scaffold00159 239505 1 A T scaffold10370 ScafM INDEL 0045.scaffold00159 239529 1 A . scaffold10370 ScafM SNP 0045.scaffold00159 239541 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 240128 2 TG CA scaffold10370 ScafM INDEL 0045.scaffold00159 240139 1 A . scaffold10370 ScafM SNP 0045.scaffold00159 240170 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 240184 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 240204 2 AA GG scaffold10370 ScafM INDEL 0045.scaffold00159 240217 2 AA .. scaffold10370 ScafM SNP 0045.scaffold00159 240238 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 240263 1 T A scaffold10370 ScafM INDEL 0045.scaffold00159 241651 1 . T scaffold10370 ScafM SNP 0045.scaffold00159 241672 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 242069 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 242099 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 242110 1 G . scaffold10370 ScafM INDEL 0045.scaffold00159 242113 1 G . scaffold10370 ScafM SNP 0045.scaffold00159 242125 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 242867 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 242876 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 242899 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 242911 1 C A scaffold10370 ScafM SNP 0045.scaffold00159 242932 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 242988 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 247570 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 247621 2 CG GA scaffold10370 ScafM SNP 0045.scaffold00159 247632 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 247634 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 247637 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 247648 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 247673 1 A G scaffold10370 ScafM INDEL 0045.scaffold00159 247693 29 ............................. ATTTGTAATTACGTGTTAATAAAAATTAT scaffold10370 ScafM SNP 0045.scaffold00159 247714 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 247717 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 247719 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 247724 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 247727 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 247731 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 247738 1 C G scaffold10370 ScafM INDEL 0045.scaffold00159 247774 1 T . scaffold10370 ScafM INDEL 0045.scaffold00159 247785 1 G . scaffold10370 ScafM SNP 0045.scaffold00159 247799 3 AGA TAT scaffold10370 ScafM INDEL 0045.scaffold00159 247804 2 CC .. scaffold10370 ScafM SNP 0045.scaffold00159 247851 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 247864 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 247918 1 T . scaffold10370 ScafM SNP 0045.scaffold00159 247925 1 T G scaffold10370 ScafM INDEL 0045.scaffold00159 247940 1 T . scaffold10370 ScafM INDEL 0045.scaffold00159 247943 2 .A TC scaffold10370 ScafM INDEL 0045.scaffold00159 247976 1 G . scaffold10370 ScafM SNP 0045.scaffold00159 247983 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 248441 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 248495 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 248678 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 248795 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 248826 1 C G scaffold10370 ScafM INDEL 0045.scaffold00159 248878 3 ATT ... scaffold10370 ScafM SNP 0045.scaffold00159 248919 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 248971 1 A . scaffold10370 ScafM INDEL 0045.scaffold00159 249010 5 ....A TGCTT scaffold10370 ScafM SNP 0045.scaffold00159 249014 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 249037 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 249053 1 . C scaffold10370 ScafM INDEL 0045.scaffold00159 249062 4 .... ATGT scaffold10370 ScafM SNP 0045.scaffold00159 249113 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 249116 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 249604 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 249747 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 249792 1 . T scaffold10370 ScafM INDEL 0045.scaffold00159 249800 9 ......... TGTTTTTGA scaffold10370 ScafM INDEL 0045.scaffold00159 249802 1 . C scaffold10370 ScafM INDEL 0045.scaffold00159 249803 2 .. GA scaffold10370 ScafM INDEL 0045.scaffold00159 249805 8 ........ GAAACAGA scaffold10370 ScafM INDEL 0045.scaffold00159 249850 2 .C GA scaffold10370 ScafM SNP 0045.scaffold00159 249910 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 250087 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 250103 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 250131 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 250140 1 C A scaffold10370 ScafM INDEL 0045.scaffold00159 250164 2 .. GT scaffold10370 ScafM INDEL 0045.scaffold00159 251223 1 . T scaffold10370 ScafM SNP 0045.scaffold00159 251404 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 251410 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 251426 1 A G scaffold10370 Both SNP 0045.scaffold00159 251555 1 A G scaffold10370 Both SNP 0045.scaffold00159 251561 1 T C scaffold10370 Both SNP 0045.scaffold00159 251570 1 A G scaffold10370 ReadM SNP 0045.scaffold00159 251729 1 C T - ReadM SNP 0045.scaffold00159 251763 1 A G - ReadM SNP 0045.scaffold00159 251793 1 G C - ReadM SNP 0045.scaffold00159 252075 1 T A - ReadM SNP 0045.scaffold00159 252077 1 T A - ReadM SNP 0045.scaffold00159 252184 1 T C - ReadM SNP 0045.scaffold00159 252594 1 T A - ScafM SNP 0045.scaffold00159 252777 1 T C scaffold3216 Both SNP 0045.scaffold00159 252788 1 G A scaffold3216 ScafM SNP 0045.scaffold00159 253052 1 T C scaffold3216 ScafM SNP 0045.scaffold00159 253083 1 G A scaffold3216 Both SNP 0045.scaffold00159 253156 1 A T scaffold3216 ScafM SNP 0045.scaffold00159 253166 1 G T scaffold3216 ScafM SNP 0045.scaffold00159 253205 1 T C scaffold3216 ScafM SNP 0045.scaffold00159 253307 1 A G scaffold3216 ScafM SNP 0045.scaffold00159 253309 1 G A scaffold3216 ReadM SNP 0045.scaffold00159 253658 1 A G - ReadM SNP 0045.scaffold00159 253715 1 G A - ReadM SNP 0045.scaffold00159 253838 1 G A - ReadM SNP 0045.scaffold00159 253857 1 A G - ReadM SNP 0045.scaffold00159 255197 1 G A - ScafM SNP 0045.scaffold00159 255389 3 TGC CTT scaffold10370 ScafM SNP 0045.scaffold00159 255407 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 255445 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 255472 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 255499 1 T G scaffold10370 Both SNP 0045.scaffold00159 255622 1 T C scaffold10370 Both SNP 0045.scaffold00159 255652 1 T C scaffold10370 Both SNP 0045.scaffold00159 255655 1 A C scaffold10370 Both SNP 0045.scaffold00159 255723 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 255765 1 A G scaffold10370 Both SNP 0045.scaffold00159 255785 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 255804 1 A G scaffold10370 Both SNP 0045.scaffold00159 255811 1 C T scaffold10370 Both SNP 0045.scaffold00159 255924 1 G A scaffold10370 Both SNP 0045.scaffold00159 255928 1 A C scaffold10370 ReadM SNP 0045.scaffold00159 256004 1 T G - ReadM INDEL 0045.scaffold00159 256033 1 . C - ReadM SNP 0045.scaffold00159 256145 1 T C - ReadM SNP 0045.scaffold00159 256166 1 G T - ReadM SNP 0045.scaffold00159 256212 1 T C - ReadM SNP 0045.scaffold00159 256253 1 T C - ReadM INDEL 0045.scaffold00159 256280 1 A . - ReadM SNP 0045.scaffold00159 256372 1 G A - ReadM SNP 0045.scaffold00159 256381 1 T C - ReadM SNP 0045.scaffold00159 256425 1 T C - ReadM SNP 0045.scaffold00159 256433 1 T C - ReadM SNP 0045.scaffold00159 256444 1 T C - ScafM SNP 0045.scaffold00159 256565 1 G A scaffold10370 Both SNP 0045.scaffold00159 256648 1 G A scaffold10370 Both SNP 0045.scaffold00159 256668 1 T C scaffold10370 Both SNP 0045.scaffold00159 256722 1 C T scaffold10370 Both SNP 0045.scaffold00159 256750 1 T C scaffold10370 Both SNP 0045.scaffold00159 256879 1 T G scaffold10370 Both SNP 0045.scaffold00159 256922 1 A G scaffold10370 Both INDEL 0045.scaffold00159 256989 1 T . scaffold10370 Both SNP 0045.scaffold00159 257015 1 A G scaffold10370 Both SNP 0045.scaffold00159 257113 1 G A scaffold10370 Both SNP 0045.scaffold00159 257120 1 G A scaffold10370 Both SNP 0045.scaffold00159 257165 1 G A scaffold10370 Both SNP 0045.scaffold00159 257202 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 257239 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 257244 1 T C scaffold10370 ScafM INDEL 0045.scaffold00159 257259 14 .............. CATATATATACTCA scaffold10370 Both SNP 0045.scaffold00159 257459 1 T G scaffold10370 Both SNP 0045.scaffold00159 257564 1 G A scaffold10370 Both SNP 0045.scaffold00159 257651 1 G C scaffold10370 ReadM SNP 0045.scaffold00159 257769 1 G A - ReadM SNP 0045.scaffold00159 257872 1 G A - ReadM SNP 0045.scaffold00159 257883 1 G A - ReadM SNP 0045.scaffold00159 257907 1 T C - ReadM SNP 0045.scaffold00159 257989 1 T C - ReadM SNP 0045.scaffold00159 258107 1 G A - Both SNP 0045.scaffold00159 258250 1 T G scaffold10370 Both SNP 0045.scaffold00159 258252 1 A G scaffold10370 Both SNP 0045.scaffold00159 258281 1 T G scaffold10370 Both SNP 0045.scaffold00159 258860 1 G T scaffold10370 Both SNP 0045.scaffold00159 259029 1 A C scaffold10370 ReadM SNP 0045.scaffold00159 259131 1 T C - ReadM SNP 0045.scaffold00159 259251 1 G A - ReadM SNP 0045.scaffold00159 259453 1 C T - ReadM SNP 0045.scaffold00159 259563 1 G T - ReadM SNP 0045.scaffold00159 259863 1 T C - ReadM SNP 0045.scaffold00159 259873 1 C T - ReadM SNP 0045.scaffold00159 259895 1 A G - ReadM SNP 0045.scaffold00159 259936 1 A G - ReadM SNP 0045.scaffold00159 260113 1 A G - Both SNP 0045.scaffold00159 260554 1 G T scaffold10370 ReadM SNP 0045.scaffold00159 260568 1 C T - ReadM SNP 0045.scaffold00159 260623 1 T G - ScafM SNP 0045.scaffold00159 260703 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 260716 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 260970 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 261011 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 261048 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 261076 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 261137 1 A C scaffold10370 Both SNP 0045.scaffold00159 261176 1 T C scaffold10370 Both SNP 0045.scaffold00159 261213 1 C T scaffold10370 Both SNP 0045.scaffold00159 261450 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 261491 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 261503 1 C T scaffold10370 Both INDEL 0045.scaffold00159 261735 1 . A scaffold10370 Both SNP 0045.scaffold00159 261785 1 C A scaffold10370 Both SNP 0045.scaffold00159 261823 1 A G scaffold10370 Both SNP 0045.scaffold00159 261888 1 G A scaffold10370 Both SNP 0045.scaffold00159 261947 1 T C scaffold10370 Both SNP 0045.scaffold00159 262077 1 A C scaffold10370 Both SNP 0045.scaffold00159 262145 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 262180 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 262182 1 C G scaffold10370 Both SNP 0045.scaffold00159 262294 1 C T scaffold10370 ReadM SNP 0045.scaffold00159 262426 1 C T - Both SNP 0045.scaffold00159 262491 1 A G scaffold10370 Both SNP 0045.scaffold00159 262602 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 262657 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 262676 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 262732 1 A C scaffold10370 Both SNP 0045.scaffold00159 262891 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 262915 1 T C scaffold10370 Both SNP 0045.scaffold00159 262998 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 263130 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 263374 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 263659 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 263704 1 C T scaffold10370 Both SNP 0045.scaffold00159 263863 1 G A scaffold10370 Both SNP 0045.scaffold00159 263870 1 A G scaffold10370 Both SNP 0045.scaffold00159 263920 1 T C scaffold10370 Both SNP 0045.scaffold00159 263942 1 A G scaffold10370 Both SNP 0045.scaffold00159 264009 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 264055 1 G A scaffold10370 Both SNP 0045.scaffold00159 264110 1 G A scaffold10370 Both SNP 0045.scaffold00159 264141 1 C G scaffold10370 Both SNP 0045.scaffold00159 264169 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 264216 1 C G scaffold10370 Both SNP 0045.scaffold00159 264292 1 G T scaffold10370 Both SNP 0045.scaffold00159 264415 1 T G scaffold10370 Both INDEL 0045.scaffold00159 264531 1 A . scaffold10370 Both SNP 0045.scaffold00159 264575 1 A C scaffold10370 Both SNP 0045.scaffold00159 264670 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 264896 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 264902 1 G C scaffold10370 Both SNP 0045.scaffold00159 264958 1 A G scaffold10370 Both INDEL 0045.scaffold00159 264963 1 . G scaffold10370 Both SNP 0045.scaffold00159 265097 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 265250 2 AG CA scaffold10370 ScafM INDEL 0045.scaffold00159 265313 5 ..... ACCAG scaffold10370 Both SNP 0045.scaffold00159 265352 1 C G scaffold10370 Both SNP 0045.scaffold00159 265571 1 T C scaffold10370 Both SNP 0045.scaffold00159 265581 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 265596 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 265796 1 A G scaffold10370 Both SNP 0045.scaffold00159 266304 1 T C scaffold10370 Both SNP 0045.scaffold00159 266466 2 GC AA scaffold10370 ScafM SNP 0045.scaffold00159 266537 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 266543 1 T . scaffold10370 Both SNP 0045.scaffold00159 266741 1 A G scaffold10370 ScafM INDEL 0045.scaffold00159 266873 27 ........................... GTTTCATACTACCAAATAGGTTTGCCA scaffold10370 ScafM SNP 0045.scaffold00159 266937 1 C T scaffold10370 Both SNP 0045.scaffold00159 267091 1 T A scaffold10370 Both SNP 0045.scaffold00159 267112 1 C T scaffold10370 Both SNP 0045.scaffold00159 267126 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 267150 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 267163 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 267171 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 267197 1 G C scaffold10370 ScafM INDEL 0045.scaffold00159 267223 1 . A scaffold10370 ScafM SNP 0045.scaffold00159 267233 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 267235 2 .. AA scaffold10370 ScafM SNP 0045.scaffold00159 267252 1 G C scaffold10370 ScafM SNP 0045.scaffold00159 267290 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 267305 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 267340 1 G . scaffold10370 ScafM SNP 0045.scaffold00159 267351 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 267396 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 267417 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 267435 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 267464 1 T G scaffold10370 ScafM INDEL 0045.scaffold00159 267493 1 . C scaffold10370 ScafM SNP 0045.scaffold00159 267522 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 267563 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 267599 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 268600 1 C T scaffold9267 ScafM SNP 0045.scaffold00159 268632 1 T G scaffold9267 ScafM SNP 0045.scaffold00159 268636 1 G T scaffold9267 ReadM SNP 0045.scaffold00159 269419 1 G T - ScafM SNP 0045.scaffold00159 269562 3 TAC GGT scaffold10370 ScafM SNP 0045.scaffold00159 269574 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 269600 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 269612 1 T C scaffold10370 ScafM INDEL 0045.scaffold00159 269652 1 . G scaffold10370 ScafM SNP 0045.scaffold00159 269674 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 269678 2 TT CC scaffold10370 ScafM SNP 0045.scaffold00159 269717 2 AA GG scaffold10370 ScafM SNP 0045.scaffold00159 269727 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 269759 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 269766 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 269786 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 269794 1 A T scaffold10370 ScafM SNP 0045.scaffold00159 269828 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 269847 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 269872 1 G C scaffold10370 ScafM SNP 0045.scaffold00159 269885 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 269894 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 269897 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 269899 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 269912 1 A C scaffold10370 ScafM SNP 0045.scaffold00159 269928 1 T G scaffold10370 ScafM SNP 0045.scaffold00159 269930 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 269940 1 C A scaffold10370 ScafM SNP 0045.scaffold00159 269942 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 269955 1 C A scaffold10370 ReadM SNP 0045.scaffold00159 270549 1 A T - ReadM SNP 0045.scaffold00159 270734 1 C T - ReadM SNP 0045.scaffold00159 270843 1 C A - ReadM SNP 0045.scaffold00159 270901 1 A G - ReadM SNP 0045.scaffold00159 270924 1 G A - ReadM SNP 0045.scaffold00159 270948 1 T G - ReadM SNP 0045.scaffold00159 271103 1 T G - ScafM SNP 0045.scaffold00159 271511 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 271515 1 C T scaffold10370 ScafM SNP 0045.scaffold00159 271526 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 271537 1 G A scaffold10370 ScafM INDEL 0045.scaffold00159 271546 1 . C scaffold10370 ScafM SNP 0045.scaffold00159 271590 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 271651 1 G T scaffold10370 ScafM SNP 0045.scaffold00159 271675 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 271679 1 T A scaffold10370 ScafM SNP 0045.scaffold00159 271684 1 C T scaffold10370 ScafM INDEL 0045.scaffold00159 271745 1 C . scaffold10370 Both SNP 0045.scaffold00159 271795 1 A C scaffold10370 Both SNP 0045.scaffold00159 271815 1 G A scaffold10370 Both SNP 0045.scaffold00159 271864 1 C A scaffold10370 Both SNP 0045.scaffold00159 271879 1 G T scaffold10370 Both SNP 0045.scaffold00159 271971 1 G T scaffold10370 Both SNP 0045.scaffold00159 272042 1 A C scaffold10370 Both SNP 0045.scaffold00159 272075 1 T C scaffold10370 ScafM SNP 0045.scaffold00159 272139 1 C G scaffold10370 ScafM SNP 0045.scaffold00159 272141 1 G A scaffold10370 ScafM SNP 0045.scaffold00159 272150 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 272155 1 A G scaffold10370 ScafM SNP 0045.scaffold00159 272165 1 T G scaffold10370 Both SNP 0045.scaffold00159 272251 1 G A scaffold10370 Both INDEL 0045.scaffold00159 272306 1 A . scaffold10370 Both SNP 0045.scaffold00159 272417 1 T A scaffold10370 ReadM SNP 0045.scaffold00159 272479 1 A T - ReadM SNP 0045.scaffold00159 272493 1 G C - ReadM INDEL 0045.scaffold00159 272691 2 AC .. - ReadM SNP 0045.scaffold00159 272715 1 T C - ReadM SNP 0045.scaffold00159 272908 1 T A - ReadM SNP 0045.scaffold00159 298399 1 G T - ReadM INDEL 0045.scaffold00159 298499 1 . A - ReadM SNP 0045.scaffold00159 298569 1 T C - ReadM SNP 0045.scaffold00159 298575 1 A G - ReadM SNP 0045.scaffold00159 298600 1 C A - ReadM SNP 0045.scaffold00159 298673 1 T G - ReadM SNP 0045.scaffold00159 298722 1 C T - ReadM SNP 0045.scaffold00159 298982 1 A T - ReadM SNP 0045.scaffold00159 299044 1 C T - ReadM SNP 0045.scaffold00159 299069 2 GG TA - ReadM INDEL 0045.scaffold00159 299646 1 A . - ReadM SNP 0045.scaffold00159 299768 1 T G - ReadM SNP 0045.scaffold00159 299880 1 C G - ReadM SNP 0045.scaffold00159 299895 1 T C - ReadM SNP 0045.scaffold00159 300022 1 A G - ReadM SNP 0045.scaffold00159 300140 1 T C - ReadM SNP 0045.scaffold00159 300188 1 T G - ReadM SNP 0045.scaffold00159 300228 1 C A - ReadM SNP 0045.scaffold00159 300261 1 T C - ReadM SNP 0045.scaffold00159 300633 1 G A - ReadM SNP 0045.scaffold00159 300978 1 C T - ReadM SNP 0045.scaffold00159 300987 1 G A - ReadM INDEL 0045.scaffold00159 301083 1 . T - ReadM SNP 0045.scaffold00159 301102 1 T G - ScafM SNP 0045.scaffold00159 301137 2 CA GG scaffold42279 ScafM SNP 0045.scaffold00159 301145 1 T A scaffold42279 ScafM SNP 0045.scaffold00159 301147 1 T A scaffold42279 ScafM INDEL 0045.scaffold00159 301150 1 G . scaffold42279 Both SNP 0045.scaffold00159 301216 1 C T scaffold42279 ScafM SNP 0045.scaffold00159 301414 1 G A scaffold42279 ScafM SNP 0045.scaffold00159 301498 1 C T scaffold42279 ScafM SNP 0045.scaffold00159 301545 1 G C scaffold42279 Both SNP 0045.scaffold00159 301555 1 G A scaffold42279 ReadM SNP 0045.scaffold00159 301669 1 A G - ReadM SNP 0045.scaffold00159 301677 1 A G - ReadM SNP 0045.scaffold00159 302095 1 T A - ReadM SNP 0045.scaffold00159 302286 1 A G - ScafM SNP 0045.scaffold00159 302697 1 A C scaffold13116 ReadM SNP 0045.scaffold00159 302845 1 T G - ReadM SNP 0045.scaffold00159 302851 1 T A - ScafM SNP 0045.scaffold00159 302858 1 T A scaffold13116 ScafM SNP 0045.scaffold00159 302893 1 C G scaffold13116 ScafM SNP 0045.scaffold00159 302896 1 A T scaffold13116 ScafM SNP 0045.scaffold00159 302979 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 303004 1 T C scaffold13116 ReadM SNP 0045.scaffold00159 303253 1 T C - ReadM SNP 0045.scaffold00159 303297 1 C T - ReadM SNP 0045.scaffold00159 303308 1 T C - ReadM SNP 0045.scaffold00159 303451 1 T A - ReadM SNP 0045.scaffold00159 303687 1 T C - ReadM SNP 0045.scaffold00159 308023 1 T A - ReadM SNP 0045.scaffold00159 309556 1 A T - ReadM SNP 0045.scaffold00159 310063 1 C T - ReadM SNP 0045.scaffold00159 310505 1 G C - ReadM SNP 0045.scaffold00159 310511 1 T G - ReadM SNP 0045.scaffold00159 310932 1 C T - Both SNP 0045.scaffold00159 311262 1 G T scaffold13116 Both SNP 0045.scaffold00159 311314 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 311422 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 311699 1 A C - ScafM SNP 0045.scaffold00159 311815 1 G C scaffold13116 ReadM SNP 0045.scaffold00159 311910 1 G A - ReadM SNP 0045.scaffold00159 311914 1 C T - ReadM SNP 0045.scaffold00159 312027 1 T G - Both SNP 0045.scaffold00159 312181 1 A G scaffold13116 Both SNP 0045.scaffold00159 312232 1 C A scaffold13116 Both SNP 0045.scaffold00159 312348 1 T C scaffold13116 Both SNP 0045.scaffold00159 312375 1 G T scaffold13116 Both SNP 0045.scaffold00159 312421 1 A C scaffold13116 Both SNP 0045.scaffold00159 312502 1 A C scaffold13116 Both SNP 0045.scaffold00159 312533 1 C G scaffold13116 ScafM SNP 0045.scaffold00159 312540 1 A T scaffold13116 ReadM SNP 0045.scaffold00159 312599 1 C T - ReadM SNP 0045.scaffold00159 312625 1 T A - Both SNP 0045.scaffold00159 312755 1 C G scaffold13116 Both SNP 0045.scaffold00159 312761 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 312837 1 T G scaffold13116 ScafM INDEL 0045.scaffold00159 312851 3 ... TTG scaffold13116 Both SNP 0045.scaffold00159 312875 1 G T scaffold13116 ScafM SNP 0045.scaffold00159 312907 1 A G scaffold13116 Both SNP 0045.scaffold00159 313026 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 313033 1 G A scaffold13116 Both SNP 0045.scaffold00159 313215 1 C T scaffold13116 Both SNP 0045.scaffold00159 313354 1 G T scaffold13116 Both SNP 0045.scaffold00159 313373 1 T G scaffold13116 Both SNP 0045.scaffold00159 313426 1 G T scaffold13116 Both SNP 0045.scaffold00159 313454 1 A T scaffold13116 Both INDEL 0045.scaffold00159 313554 1 T . scaffold13116 Both SNP 0045.scaffold00159 313612 1 T A scaffold13116 ScafM INDEL 0045.scaffold00159 313681 67 ................................................................... TTTGTTTTCAGGGTATTTTGTTTTCTTAATTTTGTGTATTTTAGTTTAAGACTTAGGCTCTTTTTGT scaffold13116 ReadM SNP 0045.scaffold00159 313683 1 A T - ScafM INDEL 0045.scaffold00159 313713 1 . G scaffold13116 ScafM INDEL 0045.scaffold00159 313714 2 .. GG scaffold13116 ScafM SNP 0045.scaffold00159 313716 1 G C scaffold13116 ScafM INDEL 0045.scaffold00159 313718 4 .... CTAC scaffold13116 ScafM INDEL 0045.scaffold00159 313721 1 . C scaffold13116 ScafM INDEL 0045.scaffold00159 313723 2 .. TT scaffold13116 ScafM INDEL 0045.scaffold00159 313724 1 . T scaffold13116 ScafM INDEL 0045.scaffold00159 313725 1 . T scaffold13116 ScafM SNP 0045.scaffold00159 313728 2 TG AT scaffold13116 ScafM SNP 0045.scaffold00159 313732 2 CG AA scaffold13116 ScafM INDEL 0045.scaffold00159 313734 2 .. TC scaffold13116 ScafM SNP 0045.scaffold00159 313779 1 T A scaffold13116 ScafM SNP 0045.scaffold00159 313782 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 313874 1 G T - ReadM INDEL 0045.scaffold00159 313922 1 A . - ReadM SNP 0045.scaffold00159 314154 1 T G - ReadM SNP 0045.scaffold00159 314160 1 G A - ReadM SNP 0045.scaffold00159 314209 1 A C - ReadM SNP 0045.scaffold00159 314336 1 C A - Both SNP 0045.scaffold00159 314475 1 A G scaffold13116 ReadM SNP 0045.scaffold00159 314616 1 T C - ReadM SNP 0045.scaffold00159 314778 1 G A - ReadM SNP 0045.scaffold00159 314831 1 T C - Both SNP 0045.scaffold00159 315056 1 T A scaffold13116 ReadM SNP 0045.scaffold00159 315085 1 T C - ReadM SNP 0045.scaffold00159 315104 1 C T - ReadM SNP 0045.scaffold00159 315185 1 C T - ReadM SNP 0045.scaffold00159 315198 1 T G - ReadM INDEL 0045.scaffold00159 315277 1 . C - ReadM SNP 0045.scaffold00159 315289 1 A G - ReadM SNP 0045.scaffold00159 315331 1 C T - Both SNP 0045.scaffold00159 315402 1 A G scaffold13116 Both SNP 0045.scaffold00159 315411 1 T C scaffold13116 Both SNP 0045.scaffold00159 315424 1 A G scaffold13116 Both SNP 0045.scaffold00159 315468 1 T C scaffold13116 Both SNP 0045.scaffold00159 315528 1 T G scaffold13116 Both SNP 0045.scaffold00159 315538 1 C T scaffold13116 Both SNP 0045.scaffold00159 315557 1 G A scaffold13116 Both INDEL 0045.scaffold00159 315620 1 . C scaffold13116 Both SNP 0045.scaffold00159 315840 1 A G scaffold13116 ReadM SNP 0045.scaffold00159 315917 1 C T - ReadM SNP 0045.scaffold00159 315984 1 C A - ReadM SNP 0045.scaffold00159 315994 1 C T - ReadM SNP 0045.scaffold00159 316000 1 T C - ScafM SNP 0045.scaffold00159 316459 1 A G scaffold13116 ScafM SNP 0045.scaffold00159 316461 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 316505 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 316612 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 316685 1 T A scaffold13116 Both SNP 0045.scaffold00159 316827 1 G C scaffold13116 Both SNP 0045.scaffold00159 316879 1 T G scaffold13116 ReadM SNP 0045.scaffold00159 316953 1 C T - ReadM SNP 0045.scaffold00159 316957 1 T C - ReadM SNP 0045.scaffold00159 316964 1 C T - Both SNP 0045.scaffold00159 317414 1 G C scaffold13116 Both SNP 0045.scaffold00159 317454 1 C A scaffold13116 ScafM SNP 0045.scaffold00159 317556 1 A G scaffold13116 ReadM SNP 0045.scaffold00159 317747 1 G A - ScafM SNP 0045.scaffold00159 317827 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 317838 1 C A scaffold13116 ScafM SNP 0045.scaffold00159 317840 1 C A scaffold13116 ScafM INDEL 0045.scaffold00159 317841 6 ...... AAAAAG scaffold13116 ScafM SNP 0045.scaffold00159 317912 1 T A scaffold13116 ScafM SNP 0045.scaffold00159 317923 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 317934 1 G C scaffold13116 ScafM SNP 0045.scaffold00159 317959 2 TC CT scaffold13116 ScafM INDEL 0045.scaffold00159 318010 1 T . scaffold13116 ScafM SNP 0045.scaffold00159 318201 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 318703 2 CT AA scaffold13116 ScafM INDEL 0045.scaffold00159 318863 5 TTCGC ..... scaffold13116 Both SNP 0045.scaffold00159 318888 1 A C scaffold13116 Both SNP 0045.scaffold00159 319127 1 G A scaffold13116 Both SNP 0045.scaffold00159 319206 1 A G scaffold13116 Both SNP 0045.scaffold00159 319314 1 A G scaffold13116 Both SNP 0045.scaffold00159 319322 1 A G scaffold13116 Both SNP 0045.scaffold00159 319370 1 T C scaffold13116 Both SNP 0045.scaffold00159 319419 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 319447 2 AT GA scaffold13116 ReadM SNP 0045.scaffold00159 319502 1 C T - ReadM SNP 0045.scaffold00159 319668 1 A C - Both SNP 0045.scaffold00159 319802 1 A G scaffold13116 Both SNP 0045.scaffold00159 319904 1 T C scaffold13116 Both SNP 0045.scaffold00159 320031 1 C T scaffold13116 Both SNP 0045.scaffold00159 320123 1 T G scaffold13116 ScafM SNP 0045.scaffold00159 320130 1 A T scaffold13116 Both SNP 0045.scaffold00159 320243 1 C G scaffold13116 Both SNP 0045.scaffold00159 320290 1 G A scaffold13116 Both INDEL 0045.scaffold00159 320342 1 . T scaffold13116 Both SNP 0045.scaffold00159 320362 1 T A scaffold13116 Both SNP 0045.scaffold00159 320397 1 G A scaffold13116 Both SNP 0045.scaffold00159 320428 1 T C scaffold13116 Both SNP 0045.scaffold00159 320570 1 T C scaffold13116 ReadM SNP 0045.scaffold00159 320687 1 T C - ReadM SNP 0045.scaffold00159 320721 1 T C - ScafM SNP 0045.scaffold00159 320733 1 C G scaffold13116 Both INDEL 0045.scaffold00159 320884 2 .. AT scaffold13116 ScafM SNP 0045.scaffold00159 321013 1 G C scaffold13116 ScafM SNP 0045.scaffold00159 321170 1 G A scaffold13116 Both SNP 0045.scaffold00159 321206 1 T A scaffold13116 Both SNP 0045.scaffold00159 321218 1 A G scaffold13116 Both INDEL 0045.scaffold00159 321260 1 A . scaffold13116 ReadM SNP 0045.scaffold00159 321295 1 G A - ReadM SNP 0045.scaffold00159 321325 1 G A - ReadM INDEL 0045.scaffold00159 321365 1 A . - ReadM SNP 0045.scaffold00159 321493 1 A G - ReadM SNP 0045.scaffold00159 321543 1 A T - ReadM INDEL 0045.scaffold00159 321573 1 . T - ReadM SNP 0045.scaffold00159 321608 1 C T - ReadM SNP 0045.scaffold00159 321683 1 G C - ReadM SNP 0045.scaffold00159 321697 1 T G - ReadM SNP 0045.scaffold00159 321781 1 T A - ReadM SNP 0045.scaffold00159 321805 1 T A - ReadM SNP 0045.scaffold00159 321872 1 C T - ReadM SNP 0045.scaffold00159 321879 1 T C - ReadM SNP 0045.scaffold00159 321892 1 C T - ReadM SNP 0045.scaffold00159 321964 1 A C - ReadM SNP 0045.scaffold00159 322052 1 C A - ReadM SNP 0045.scaffold00159 322210 1 A C - ReadM SNP 0045.scaffold00159 322314 1 G A - ReadM SNP 0045.scaffold00159 322366 1 A T - ReadM SNP 0045.scaffold00159 322371 1 T C - ReadM SNP 0045.scaffold00159 322472 1 G C - ReadM INDEL 0045.scaffold00159 322484 1 . A - ReadM SNP 0045.scaffold00159 322523 1 T A - ReadM SNP 0045.scaffold00159 322703 1 T A - ReadM SNP 0045.scaffold00159 322713 1 G T - ReadM SNP 0045.scaffold00159 322835 1 C G - ReadM SNP 0045.scaffold00159 322944 1 G A - ReadM SNP 0045.scaffold00159 323201 1 A G - ReadM SNP 0045.scaffold00159 323238 1 T A - ReadM SNP 0045.scaffold00159 323396 1 T G - ReadM SNP 0045.scaffold00159 324086 1 G A - ReadM SNP 0045.scaffold00159 324616 1 G C - ReadM SNP 0045.scaffold00159 324735 1 A T - ReadM SNP 0045.scaffold00159 325284 1 A G - ReadM SNP 0045.scaffold00159 325294 1 A T - ReadM SNP 0045.scaffold00159 325296 1 C T - ScafM SNP 0045.scaffold00159 325407 1 A G scaffold13116 ScafM SNP 0045.scaffold00159 325618 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 325732 1 T C scaffold13116 ReadM SNP 0045.scaffold00159 325820 1 C T - ReadM SNP 0045.scaffold00159 325882 1 A C - ReadM SNP 0045.scaffold00159 325923 1 A G - ReadM SNP 0045.scaffold00159 325925 1 A G - ScafM SNP 0045.scaffold00159 325998 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 326069 1 A G scaffold13116 Both SNP 0045.scaffold00159 326248 1 T C scaffold13116 Both SNP 0045.scaffold00159 326360 1 T C scaffold13116 Both SNP 0045.scaffold00159 326378 1 T C scaffold13116 Both SNP 0045.scaffold00159 326396 1 G A scaffold13116 ScafM SNP 0045.scaffold00159 326410 1 C T scaffold13116 ScafM INDEL 0045.scaffold00159 326459 4 ATGC .... scaffold13116 Both SNP 0045.scaffold00159 326487 1 G A scaffold13116 Both SNP 0045.scaffold00159 326521 1 G A scaffold13116 Both SNP 0045.scaffold00159 326621 1 G T scaffold13116 Both SNP 0045.scaffold00159 326635 1 A G scaffold13116 Both SNP 0045.scaffold00159 326734 1 T G scaffold13116 Both INDEL 0045.scaffold00159 326850 1 T . scaffold13116 Both SNP 0045.scaffold00159 326915 1 T C scaffold13116 ReadM SNP 0045.scaffold00159 327050 1 A G - Both INDEL 0045.scaffold00159 327204 1 T . scaffold13116 Both SNP 0045.scaffold00159 327267 1 C A scaffold13116 Both SNP 0045.scaffold00159 327345 1 C A scaffold13116 Both SNP 0045.scaffold00159 327398 1 C A scaffold13116 ReadM SNP 0045.scaffold00159 327497 1 G A - ReadM INDEL 0045.scaffold00159 327579 2 AT .. - Both SNP 0045.scaffold00159 327634 1 T G scaffold13116 ScafM SNP 0045.scaffold00159 327712 1 T C scaffold13116 Both SNP 0045.scaffold00159 327723 1 C T scaffold13116 Both SNP 0045.scaffold00159 327799 1 G T scaffold13116 Both SNP 0045.scaffold00159 327861 1 G A scaffold13116 ReadM SNP 0045.scaffold00159 328040 1 C T - ReadM SNP 0045.scaffold00159 328065 1 A G - ReadM SNP 0045.scaffold00159 328113 1 G C - ReadM SNP 0045.scaffold00159 328145 1 A T - ReadM INDEL 0045.scaffold00159 328356 1 . C - ScafM INDEL 0045.scaffold00159 328356 2 .T CA scaffold13116 Both SNP 0045.scaffold00159 328423 1 G A scaffold13116 Both SNP 0045.scaffold00159 328440 1 G C scaffold13116 Both SNP 0045.scaffold00159 328601 1 T C scaffold13116 Both SNP 0045.scaffold00159 328639 1 G A scaffold13116 Both SNP 0045.scaffold00159 328699 1 C G scaffold13116 Both INDEL 0045.scaffold00159 328742 1 C . scaffold13116 ReadM SNP 0045.scaffold00159 328852 1 T C - Both INDEL 0045.scaffold00159 329247 2 AC .. scaffold13116 Both SNP 0045.scaffold00159 329327 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 329412 1 T G - ReadM SNP 0045.scaffold00159 329692 1 A C - ReadM SNP 0045.scaffold00159 330092 1 C T - ReadM INDEL 0045.scaffold00159 330191 1 C . - ReadM SNP 0045.scaffold00159 330241 1 T C - ReadM SNP 0045.scaffold00159 330449 1 G T - ReadM SNP 0045.scaffold00159 330470 1 T G - ReadM SNP 0045.scaffold00159 330537 1 A G - ReadM SNP 0045.scaffold00159 330747 1 G A - ReadM SNP 0045.scaffold00159 330751 1 A G - ReadM SNP 0045.scaffold00159 330904 1 G T - ReadM SNP 0045.scaffold00159 331038 1 A T - ReadM SNP 0045.scaffold00159 331076 1 C T - ReadM INDEL 0045.scaffold00159 331112 1 T . - ReadM SNP 0045.scaffold00159 331136 1 T G - ReadM SNP 0045.scaffold00159 331235 1 T C - ReadM SNP 0045.scaffold00159 331318 1 C A - ReadM INDEL 0045.scaffold00159 331478 1 . T - ReadM SNP 0045.scaffold00159 331564 1 G C - ReadM SNP 0045.scaffold00159 331706 1 T C - ReadM SNP 0045.scaffold00159 331795 1 T C - Both SNP 0045.scaffold00159 332315 1 A T scaffold13116 ReadM SNP 0045.scaffold00159 332370 1 T G - ReadM SNP 0045.scaffold00159 332428 1 A C - Both SNP 0045.scaffold00159 332698 1 T A scaffold13116 Both SNP 0045.scaffold00159 332752 1 C T scaffold13116 Both SNP 0045.scaffold00159 332789 1 A T scaffold13116 ScafM INDEL 0045.scaffold00159 332821 3 ... AAA scaffold13116 Both SNP 0045.scaffold00159 333025 1 G T scaffold13116 ReadM SNP 0045.scaffold00159 333196 1 C T - ReadM SNP 0045.scaffold00159 333202 1 A G - ReadM SNP 0045.scaffold00159 333275 1 T C - ReadM SNP 0045.scaffold00159 333285 1 T G - ReadM SNP 0045.scaffold00159 333445 1 T C - ReadM SNP 0045.scaffold00159 334350 1 C T - ReadM SNP 0045.scaffold00159 334416 1 G A - ScafM SNP 0045.scaffold00159 334570 1 C G scaffold13116 ScafM SNP 0045.scaffold00159 334743 1 C T scaffold13116 Both SNP 0045.scaffold00159 334815 1 G T scaffold13116 Both SNP 0045.scaffold00159 334827 1 A G scaffold13116 Both SNP 0045.scaffold00159 334837 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 334892 1 G T scaffold13116 ReadM SNP 0045.scaffold00159 335355 1 G T - ReadM SNP 0045.scaffold00159 335386 1 T C - ReadM SNP 0045.scaffold00159 335739 1 T A - ReadM SNP 0045.scaffold00159 335743 2 AA GG - ReadM SNP 0045.scaffold00159 335790 1 T G - ReadM SNP 0045.scaffold00159 335802 1 T C - ReadM SNP 0045.scaffold00159 336002 1 C T - ReadM SNP 0045.scaffold00159 336484 2 CG TA - ReadM SNP 0045.scaffold00159 337073 1 T G - ReadM SNP 0045.scaffold00159 337135 1 A G - ReadM SNP 0045.scaffold00159 338494 1 C T - ScafM SNP 0045.scaffold00159 338637 1 A G scaffold13116 Both SNP 0045.scaffold00159 338799 1 A G scaffold13116 ScafM INDEL 0045.scaffold00159 338836 5 CTCCC ..... scaffold13116 Both SNP 0045.scaffold00159 338872 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 339598 1 C T - ReadM SNP 0045.scaffold00159 339624 1 G A - ReadM SNP 0045.scaffold00159 339680 1 G A - ReadM SNP 0045.scaffold00159 339717 1 G A - ReadM INDEL 0045.scaffold00159 339756 1 G . - ReadM SNP 0045.scaffold00159 339769 1 C G - Both SNP 0045.scaffold00159 340137 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 340240 1 C T - Both SNP 0045.scaffold00159 340519 1 G A scaffold13116 Both SNP 0045.scaffold00159 340549 1 C T scaffold13116 Both SNP 0045.scaffold00159 340677 1 G T scaffold13116 Both SNP 0045.scaffold00159 340726 1 T G scaffold13116 Both SNP 0045.scaffold00159 340729 1 A G scaffold13116 ScafM SNP 0045.scaffold00159 340795 1 T C scaffold13116 Both SNP 0045.scaffold00159 340802 1 G A scaffold13116 ReadM SNP 0045.scaffold00159 340851 1 T C - Both SNP 0045.scaffold00159 340963 1 C G scaffold13116 Both INDEL 0045.scaffold00159 341007 1 . T scaffold13116 Both SNP 0045.scaffold00159 341069 1 A G scaffold13116 ReadM INDEL 0045.scaffold00159 341096 2 TT .. - ReadM SNP 0045.scaffold00159 341514 1 C T - ReadM SNP 0045.scaffold00159 341741 1 A G - ReadM SNP 0045.scaffold00159 341781 1 G T - ReadM SNP 0045.scaffold00159 341955 1 G A - ReadM SNP 0045.scaffold00159 341989 1 T A - ReadM INDEL 0045.scaffold00159 342315 3 GTC ... - Both SNP 0045.scaffold00159 342355 1 G C scaffold13116 Both SNP 0045.scaffold00159 342428 1 C T scaffold13116 ScafM INDEL 0045.scaffold00159 342570 9 ......... AATAGAGAA scaffold13116 Both SNP 0045.scaffold00159 342619 1 A G scaffold13116 Both SNP 0045.scaffold00159 342714 1 C G scaffold13116 ScafM SNP 0045.scaffold00159 343179 1 T A scaffold13116 ReadM SNP 0045.scaffold00159 343314 1 T C - ReadM SNP 0045.scaffold00159 343322 1 A G - ScafM SNP 0045.scaffold00159 343841 1 A G scaffold13116 Both SNP 0045.scaffold00159 343905 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 344075 1 T A scaffold13116 ScafM INDEL 0045.scaffold00159 344111 2 .G AA scaffold13116 ScafM SNP 0045.scaffold00159 344198 1 T A scaffold13116 ScafM SNP 0045.scaffold00159 344259 1 C T scaffold13116 ReadM SNP 0045.scaffold00159 344498 1 A G - ReadM SNP 0045.scaffold00159 344545 1 A G - ReadM SNP 0045.scaffold00159 344558 1 C G - ReadM SNP 0045.scaffold00159 344616 1 G A - ReadM SNP 0045.scaffold00159 344796 1 A C - ReadM SNP 0045.scaffold00159 345183 1 G T - ReadM SNP 0045.scaffold00159 345316 1 G A - ReadM SNP 0045.scaffold00159 345436 1 A G - ReadM SNP 0045.scaffold00159 345535 1 A G - ReadM SNP 0045.scaffold00159 345555 1 T A - ReadM SNP 0045.scaffold00159 345694 1 T G - ReadM SNP 0045.scaffold00159 345955 1 C T - ReadM INDEL 0045.scaffold00159 346270 3 ... AAT - ReadM SNP 0045.scaffold00159 346371 1 C T - ReadM SNP 0045.scaffold00159 346373 1 G A - ReadM SNP 0045.scaffold00159 346424 1 G A - ReadM SNP 0045.scaffold00159 346584 1 G A - ScafM SNP 0045.scaffold00159 346658 2 AA GG scaffold13116 ReadM SNP 0045.scaffold00159 346751 1 G A - ReadM SNP 0045.scaffold00159 346929 1 A G - ReadM SNP 0045.scaffold00159 346948 1 T C - ReadM SNP 0045.scaffold00159 347036 1 A G - ReadM SNP 0045.scaffold00159 347055 1 T C - ReadM SNP 0045.scaffold00159 347127 1 A G - ScafM SNP 0045.scaffold00159 352999 1 T C scaffold13116 Both SNP 0045.scaffold00159 353137 1 G A scaffold13116 ScafM INDEL 0045.scaffold00159 353217 1 . T scaffold13116 ScafM SNP 0045.scaffold00159 353219 1 G C scaffold13116 ScafM SNP 0045.scaffold00159 353251 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 353257 1 A T scaffold13116 ScafM SNP 0045.scaffold00159 353268 1 C T scaffold13116 ScafM INDEL 0045.scaffold00159 353276 1 T . scaffold13116 ScafM SNP 0045.scaffold00159 353293 1 C A scaffold13116 ScafM INDEL 0045.scaffold00159 353309 3 TTA ... scaffold13116 ScafM INDEL 0045.scaffold00159 353333 1 T . scaffold13116 ScafM SNP 0045.scaffold00159 353335 1 T A scaffold13116 Both SNP 0045.scaffold00159 353439 1 T C scaffold13116 Both SNP 0045.scaffold00159 353519 1 C T scaffold13116 ScafM SNP 0045.scaffold00159 353611 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 353626 1 T A scaffold13116 ScafM SNP 0045.scaffold00159 353633 1 G C scaffold13116 ScafM INDEL 0045.scaffold00159 353673 5 ACTGT ..... scaffold13116 ReadM SNP 0045.scaffold00159 354102 1 C G - ReadM SNP 0045.scaffold00159 354187 1 C T - ReadM SNP 0045.scaffold00159 355055 1 T C - ReadM SNP 0045.scaffold00159 355421 1 A G - ReadM SNP 0045.scaffold00159 355430 1 A G - ReadM SNP 0045.scaffold00159 355452 1 C G - ReadM SNP 0045.scaffold00159 355479 1 A G - ReadM SNP 0045.scaffold00159 355483 1 T G - ReadM SNP 0045.scaffold00159 355500 1 A C - ReadM SNP 0045.scaffold00159 355730 1 A G - ReadM SNP 0045.scaffold00159 356376 1 T C - Both SNP 0045.scaffold00159 356518 1 T C scaffold13116 Both SNP 0045.scaffold00159 356557 1 C T scaffold13116 Both SNP 0045.scaffold00159 356587 1 T C scaffold13116 Both SNP 0045.scaffold00159 356633 1 A G scaffold13116 ScafM INDEL 0045.scaffold00159 356648 20 AAAGTAACTTTAAAGCACTT .................... scaffold13116 ScafM SNP 0045.scaffold00159 356731 1 A G scaffold13116 ScafM SNP 0045.scaffold00159 356749 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 356758 1 A G scaffold13116 ScafM SNP 0045.scaffold00159 356766 1 T G scaffold13116 ReadM SNP 0045.scaffold00159 356792 1 A G - Both SNP 0045.scaffold00159 356852 1 T C scaffold13116 Both SNP 0045.scaffold00159 356949 1 A C scaffold13116 Both SNP 0045.scaffold00159 356968 1 A C scaffold13116 ReadM SNP 0045.scaffold00159 357136 1 C T - ReadM SNP 0045.scaffold00159 357256 1 G A - ReadM SNP 0045.scaffold00159 357271 1 T C - ReadM SNP 0045.scaffold00159 357404 1 A C - ReadM SNP 0045.scaffold00159 357413 1 G C - ReadM SNP 0045.scaffold00159 357548 1 T G - ReadM SNP 0045.scaffold00159 357605 1 C T - ReadM SNP 0045.scaffold00159 357627 1 G A - ReadM SNP 0045.scaffold00159 357652 1 C T - ReadM SNP 0045.scaffold00159 357689 1 T C - ReadM SNP 0045.scaffold00159 357704 1 T C - ReadM SNP 0045.scaffold00159 357739 1 A G - ReadM SNP 0045.scaffold00159 357788 1 G T - ReadM SNP 0045.scaffold00159 358008 1 G A - ReadM SNP 0045.scaffold00159 358065 1 A G - ReadM SNP 0045.scaffold00159 358068 1 G A - ReadM SNP 0045.scaffold00159 358110 1 C T - ReadM SNP 0045.scaffold00159 358246 1 A C - ReadM SNP 0045.scaffold00159 358259 1 C T - ReadM SNP 0045.scaffold00159 358307 1 T C - ReadM SNP 0045.scaffold00159 358414 1 A G - ReadM SNP 0045.scaffold00159 358438 1 G T - ReadM SNP 0045.scaffold00159 358487 1 G A - ReadM SNP 0045.scaffold00159 358617 1 A T - ReadM SNP 0045.scaffold00159 358622 1 C A - ReadM SNP 0045.scaffold00159 358934 1 A T - ReadM SNP 0045.scaffold00159 359006 1 T A - ReadM SNP 0045.scaffold00159 359014 1 A T - ReadM SNP 0045.scaffold00159 359060 1 T C - ReadM SNP 0045.scaffold00159 359100 1 A G - ReadM SNP 0045.scaffold00159 359187 1 A T - ReadM SNP 0045.scaffold00159 359243 1 T G - ReadM SNP 0045.scaffold00159 359304 1 T C - ReadM SNP 0045.scaffold00159 359394 1 G T - ReadM SNP 0045.scaffold00159 359551 1 A G - ReadM SNP 0045.scaffold00159 359697 1 C T - ReadM SNP 0045.scaffold00159 359732 1 C T - ReadM SNP 0045.scaffold00159 359772 1 G T - ReadM SNP 0045.scaffold00159 359817 1 A G - ReadM SNP 0045.scaffold00159 359848 1 T C - ReadM INDEL 0045.scaffold00159 360085 1 . G - ReadM SNP 0045.scaffold00159 360147 1 T C - ReadM SNP 0045.scaffold00159 360190 1 C T - ReadM SNP 0045.scaffold00159 360360 1 T C - ReadM SNP 0045.scaffold00159 360375 1 A T - ReadM SNP 0045.scaffold00159 360447 1 A G - ReadM SNP 0045.scaffold00159 360562 1 T A - ReadM SNP 0045.scaffold00159 360659 1 A G - ReadM SNP 0045.scaffold00159 360726 1 G T - Both SNP 0045.scaffold00159 360789 1 C T scaffold13116 Both SNP 0045.scaffold00159 360896 1 C A scaffold13116 Both SNP 0045.scaffold00159 360924 1 A G scaffold13116 ReadM INDEL 0045.scaffold00159 361095 1 G . - ReadM SNP 0045.scaffold00159 361212 1 C T - ReadM SNP 0045.scaffold00159 361239 1 A G - ReadM SNP 0045.scaffold00159 361255 1 G A - ReadM SNP 0045.scaffold00159 361273 1 T C - ReadM SNP 0045.scaffold00159 361324 1 T C - ReadM SNP 0045.scaffold00159 361352 1 T A - ReadM SNP 0045.scaffold00159 361493 1 T C - ScafM SNP 0045.scaffold00159 361883 1 T G scaffold13116 ScafM SNP 0045.scaffold00159 361974 1 T C scaffold13116 ScafM SNP 0045.scaffold00159 361977 1 C A scaffold13116 ScafM SNP 0045.scaffold00159 365226 1 C T scaffold18889 ScafM INDEL 0045.scaffold00159 365232 1 . T scaffold18889 ScafM SNP 0045.scaffold00159 365259 1 C T scaffold18889 ScafM INDEL 0045.scaffold00159 365270 2 .. CT scaffold18889 ScafM SNP 0045.scaffold00159 365311 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 365316 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 365326 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 365350 1 T A scaffold18889 ScafM SNP 0045.scaffold00159 365379 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 365392 1 G T scaffold18889 ScafM INDEL 0045.scaffold00159 365450 3 ... TTT scaffold18889 ScafM SNP 0045.scaffold00159 365466 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 365473 1 T C scaffold18889 ScafM SNP 0045.scaffold00159 365500 1 T G scaffold18889 Both SNP 0045.scaffold00159 365619 1 G A scaffold18889 Both SNP 0045.scaffold00159 365629 1 G A scaffold18889 ReadM SNP 0045.scaffold00159 365698 1 G T - Both SNP 0045.scaffold00159 366855 1 T A scaffold18889 Both SNP 0045.scaffold00159 366866 1 T G scaffold18889 Both SNP 0045.scaffold00159 366906 1 G A scaffold18889 Both SNP 0045.scaffold00159 366959 1 G A scaffold18889 Both SNP 0045.scaffold00159 367007 1 C T scaffold18889 Both SNP 0045.scaffold00159 367022 1 G A scaffold18889 ScafM INDEL 0045.scaffold00159 367180 1 A . scaffold18889 ScafM INDEL 0045.scaffold00159 367192 1 . T scaffold18889 ScafM SNP 0045.scaffold00159 367225 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 367284 1 T A scaffold18889 ScafM SNP 0045.scaffold00159 369406 2 AG GA scaffold18889 ScafM SNP 0045.scaffold00159 369442 1 A C scaffold18889 ScafM INDEL 0045.scaffold00159 369584 1 T . scaffold18889 ScafM SNP 0045.scaffold00159 369590 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 369652 1 T C scaffold18889 ScafM SNP 0045.scaffold00159 369696 2 TG CA scaffold18889 ScafM INDEL 0045.scaffold00159 369706 1 T . scaffold18889 ScafM SNP 0045.scaffold00159 369725 1 C G scaffold18889 ScafM SNP 0045.scaffold00159 369927 1 C G scaffold18889 ScafM INDEL 0045.scaffold00159 369930 7 ....... ACAGGAT scaffold18889 ScafM SNP 0045.scaffold00159 369954 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 369963 1 T A scaffold18889 ScafM SNP 0045.scaffold00159 370078 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 370083 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 370111 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 370122 1 T A scaffold18889 ScafM INDEL 0045.scaffold00159 370128 7 ....... AATATTC scaffold18889 ScafM SNP 0045.scaffold00159 370149 1 T A scaffold18889 Both SNP 0045.scaffold00159 370406 1 C G scaffold18889 ScafM SNP 0045.scaffold00159 370612 1 G A scaffold18889 Both SNP 0045.scaffold00159 370661 1 A G scaffold18889 Both SNP 0045.scaffold00159 370758 1 T C scaffold18889 Both SNP 0045.scaffold00159 370845 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 370967 2 TT AC scaffold18889 Both SNP 0045.scaffold00159 371044 1 G A scaffold18889 Both SNP 0045.scaffold00159 371130 1 G C scaffold18889 Both SNP 0045.scaffold00159 371241 1 C T scaffold18889 Both SNP 0045.scaffold00159 371297 1 T G scaffold18889 Both SNP 0045.scaffold00159 371329 1 A G scaffold18889 Both SNP 0045.scaffold00159 371557 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 371603 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 371704 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 371826 1 T A scaffold18889 Both SNP 0045.scaffold00159 371949 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 371988 1 G C scaffold18889 ScafM SNP 0045.scaffold00159 372084 2 AA TT scaffold18889 Both SNP 0045.scaffold00159 372130 1 T C scaffold18889 Both SNP 0045.scaffold00159 372190 1 T A scaffold18889 Both SNP 0045.scaffold00159 372206 1 A C scaffold18889 Both SNP 0045.scaffold00159 372247 1 T C scaffold18889 Both SNP 0045.scaffold00159 372735 1 G A scaffold18889 Both SNP 0045.scaffold00159 372815 1 G T scaffold18889 ScafM SNP 0045.scaffold00159 372892 1 G C scaffold18889 ScafM SNP 0045.scaffold00159 372962 2 GA TG scaffold18889 ScafM SNP 0045.scaffold00159 372987 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 372998 1 T G scaffold18889 ScafM SNP 0045.scaffold00159 373142 1 T C scaffold18889 ScafM SNP 0045.scaffold00159 373187 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 373193 1 G C scaffold18889 ScafM INDEL 0045.scaffold00159 373243 10 .......... GGTCTGGTCT scaffold18889 ScafM SNP 0045.scaffold00159 373289 2 CT TG scaffold18889 ScafM SNP 0045.scaffold00159 373334 1 T C scaffold18889 ScafM INDEL 0045.scaffold00159 373371 2 TA .. scaffold18889 ScafM SNP 0045.scaffold00159 373462 1 G A scaffold18889 ScafM SNP 0045.scaffold00159 373522 1 G A scaffold18889 Both SNP 0045.scaffold00159 373551 1 C T scaffold18889 ScafM SNP 0045.scaffold00159 373641 1 C G scaffold18889 ScafM SNP 0045.scaffold00159 373791 1 A G scaffold18889 ScafM SNP 0045.scaffold00159 373873 1 G A scaffold18889 ReadM SNP 0045.scaffold00159 373894 1 T C - ReadM SNP 0045.scaffold00159 374218 1 T G - ReadM SNP 0045.scaffold00159 374238 1 G A - ReadM SNP 0045.scaffold00159 374249 1 G A - ReadM SNP 0045.scaffold00159 374854 1 T A - ReadM SNP 0045.scaffold00159 374928 1 C T - ReadM SNP 0045.scaffold00159 375952 1 C T - ReadM SNP 0045.scaffold00159 376065 1 C T - ReadM SNP 0045.scaffold00159 376757 1 C G - ReadM SNP 0045.scaffold00159 376951 1 A C - ReadM SNP 0045.scaffold00159 377255 1 A C - ReadM SNP 0045.scaffold00159 377935 1 C T - ReadM SNP 0045.scaffold00159 377961 1 A T - ScafM SNP 0045.scaffold00159 378260 1 A G scaffold18889 ReadM SNP 0045.scaffold00159 378454 1 A G - ReadM SNP 0045.scaffold00159 378861 1 A G - ReadM SNP 0045.scaffold00159 378900 1 A G - ReadM SNP 0045.scaffold00159 379221 1 C T - ScafM SNP 0045.scaffold00159 379438 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 379458 1 T A scaffold9289 ScafM SNP 0045.scaffold00159 379496 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 379508 1 C A scaffold9289 ScafM INDEL 0045.scaffold00159 379559 1 . G scaffold9289 Both SNP 0045.scaffold00159 379589 1 T C scaffold9289 ScafM SNP 0045.scaffold00159 379606 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 379609 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 379614 1 T C scaffold9289 Both SNP 0045.scaffold00159 379626 1 T G scaffold9289 ScafM SNP 0045.scaffold00159 379644 1 A C scaffold9289 ScafM SNP 0045.scaffold00159 379650 1 G T scaffold9289 ScafM SNP 0045.scaffold00159 379706 1 T C scaffold9289 ScafM SNP 0045.scaffold00159 379714 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 379727 2 TG GC scaffold9289 ScafM SNP 0045.scaffold00159 379757 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 379786 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 380262 1 T A scaffold20949 ScafM SNP 0045.scaffold00159 380313 1 G A scaffold20949 ScafM SNP 0045.scaffold00159 380335 1 A G scaffold20949 ScafM SNP 0045.scaffold00159 380345 1 T C scaffold20949 Both SNP 0045.scaffold00159 380360 1 G C scaffold20949 Both SNP 0045.scaffold00159 380402 1 T C scaffold20949 ScafM SNP 0045.scaffold00159 380573 1 T C scaffold20949 ScafM SNP 0045.scaffold00159 380578 2 CC TT scaffold20949 ScafM INDEL 0045.scaffold00159 380582 2 .C GT scaffold20949 ScafM SNP 0045.scaffold00159 380602 1 A G scaffold20949 ScafM SNP 0045.scaffold00159 381418 1 T C scaffold20949 ScafM SNP 0045.scaffold00159 381431 1 C A scaffold20949 ScafM SNP 0045.scaffold00159 381440 1 A G scaffold20949 ReadM SNP 0045.scaffold00159 381818 1 T C - ReadM SNP 0045.scaffold00159 381950 1 T G - ScafM SNP 0045.scaffold00159 381981 1 C A scaffold9289 ScafM SNP 0045.scaffold00159 381988 1 A C scaffold9289 ScafM SNP 0045.scaffold00159 382002 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 382032 1 T C scaffold9289 ScafM SNP 0045.scaffold00159 382037 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 382039 1 T C scaffold9289 Both SNP 0045.scaffold00159 382041 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 382096 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 382098 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 382101 1 T A scaffold9289 ScafM SNP 0045.scaffold00159 382112 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 382132 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 382135 1 T A scaffold9289 ScafM SNP 0045.scaffold00159 382178 1 A G scaffold9289 ScafM SNP 0045.scaffold00159 382183 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 382197 1 T G scaffold9289 Both SNP 0045.scaffold00159 382203 1 G C scaffold9289 ScafM SNP 0045.scaffold00159 382231 1 G T scaffold9289 ScafM SNP 0045.scaffold00159 382240 1 T C scaffold9289 ScafM SNP 0045.scaffold00159 382284 1 A G scaffold9289 ReadM SNP 0045.scaffold00159 382294 1 A G - ScafM SNP 0045.scaffold00159 382300 1 A T scaffold9289 ScafM SNP 0045.scaffold00159 382302 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 382317 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 382321 1 T G scaffold9289 ScafM SNP 0045.scaffold00159 382383 1 T A scaffold9289 ScafM SNP 0045.scaffold00159 382398 1 C T scaffold9289 Both SNP 0045.scaffold00159 382404 1 G C scaffold9289 ScafM INDEL 0045.scaffold00159 382417 4 CTCC .... scaffold9289 Both SNP 0045.scaffold00159 382429 1 A G scaffold9289 ScafM INDEL 0045.scaffold00159 382444 1 . T scaffold9289 ScafM SNP 0045.scaffold00159 382449 1 T A scaffold9289 ScafM SNP 0045.scaffold00159 382479 1 C T scaffold9289 ScafM SNP 0045.scaffold00159 382498 1 A T scaffold9289 ScafM SNP 0045.scaffold00159 382513 1 G A scaffold9289 ScafM SNP 0045.scaffold00159 382529 1 A T scaffold9289 ScafM SNP 0045.scaffold00159 382548 1 T A scaffold9289 ReadM SNP 0045.scaffold00159 382839 1 G A - ReadM SNP 0045.scaffold00159 382845 1 T C - ReadM SNP 0045.scaffold00159 383309 1 A C - ScafM SNP 0045.scaffold00159 384507 1 A T scaffold20949 Both SNP 0045.scaffold00159 384699 1 C T scaffold20949 Both SNP 0045.scaffold00159 384701 1 C G scaffold20949 Both SNP 0045.scaffold00159 384724 1 T G scaffold20949 Both INDEL 0045.scaffold00159 384848 1 T . scaffold20949 Both SNP 0045.scaffold00159 385053 1 T G scaffold20949 Both SNP 0045.scaffold00159 385074 1 C A scaffold20949 ScafM INDEL 0045.scaffold00159 385443 7 CGAATTG ....... scaffold20949 ScafM SNP 0045.scaffold00159 385520 1 A G scaffold20949 ScafM SNP 0045.scaffold00159 385600 1 T G scaffold20949 ScafM INDEL 0045.scaffold00159 385625 25 ......................... TACTTCCCTTCTTGGCCTGCAGAGA scaffold20949 Both SNP 0045.scaffold00159 385782 1 C T scaffold20949 Both SNP 0045.scaffold00159 385826 1 T C scaffold20949 ScafM SNP 0045.scaffold00159 385854 1 C G scaffold20949 ScafM SNP 0045.scaffold00159 385897 1 A T scaffold20949 ScafM INDEL 0045.scaffold00159 385899 1 . A scaffold20949 Both SNP 0045.scaffold00159 385963 1 A C scaffold20949 Both SNP 0045.scaffold00159 386081 1 C T scaffold20949 ScafM SNP 0045.scaffold00159 386193 1 A C scaffold20949 ScafM SNP 0045.scaffold00159 386295 1 C G scaffold20949 ScafM INDEL 0045.scaffold00159 386307 5 ..... TCTGC scaffold20949 ScafM SNP 0045.scaffold00159 386311 1 A G scaffold20949 Both SNP 0045.scaffold00159 386374 2 TA CC scaffold20949 ScafM SNP 0045.scaffold00159 386480 1 C A scaffold20949 Both SNP 0045.scaffold00159 386603 1 C T scaffold20949 ReadM SNP 0045.scaffold00159 386643 1 A G - ReadM SNP 0045.scaffold00159 386828 1 T C - ScafM SNP 0045.scaffold00159 386959 2 TA AT scaffold20949 Both SNP 0045.scaffold00159 387039 1 A G scaffold20949 Both SNP 0045.scaffold00159 387120 1 G A scaffold20949 Both SNP 0045.scaffold00159 387218 1 C G scaffold20949 Both SNP 0045.scaffold00159 387285 1 C T scaffold20949 Both SNP 0045.scaffold00159 387333 1 C T scaffold20949 Both SNP 0045.scaffold00159 387341 1 G C scaffold20949 Both SNP 0045.scaffold00159 387380 1 A G scaffold20949 Both SNP 0045.scaffold00159 387442 1 A G scaffold20949 ScafM INDEL 0045.scaffold00159 387515 3 ... TTT scaffold20949 ScafM SNP 0045.scaffold00159 387516 1 A T scaffold20949 Both SNP 0045.scaffold00159 387615 1 G T scaffold20949 Both SNP 0045.scaffold00159 387742 1 G T scaffold20949 Both SNP 0045.scaffold00159 387846 1 T C scaffold20949 Both SNP 0045.scaffold00159 387857 1 T C scaffold20949 Both SNP 0045.scaffold00159 387893 1 C A scaffold20949 ScafM INDEL 0045.scaffold00159 387910 1 C . scaffold20949 ScafM INDEL 0045.scaffold00159 387944 9 ......... GGGATGCCA scaffold20949 ScafM INDEL 0045.scaffold00159 387947 3 ... TCC scaffold20949 ScafM INDEL 0045.scaffold00159 387949 3 ... CAC scaffold20949 ScafM INDEL 0045.scaffold00159 387951 1 . A scaffold20949 ScafM INDEL 0045.scaffold00159 387952 1 . C scaffold20949 Both SNP 0045.scaffold00159 388021 1 G T scaffold20949 Both SNP 0045.scaffold00159 388127 1 C T scaffold20949 Both SNP 0045.scaffold00159 388256 1 C A scaffold20949 Both SNP 0045.scaffold00159 388266 1 C T scaffold20949 Both SNP 0045.scaffold00159 388307 1 A G scaffold20949 Both SNP 0045.scaffold00159 388312 1 T C scaffold20949 Both SNP 0045.scaffold00159 388438 1 T A scaffold20949 Both SNP 0045.scaffold00159 388480 1 C T scaffold20949 Both SNP 0045.scaffold00159 388527 1 A T scaffold20949 Both SNP 0045.scaffold00159 388567 1 T G scaffold20949 Both SNP 0045.scaffold00159 388644 1 A G scaffold20949 Both SNP 0045.scaffold00159 388738 1 T C scaffold20949 Both SNP 0045.scaffold00159 388748 1 T A scaffold20949 ReadM SNP 0045.scaffold00159 388874 1 C A - ReadM SNP 0045.scaffold00159 388958 1 T C - ReadM SNP 0045.scaffold00159 389078 1 G C - ReadM SNP 0045.scaffold00159 389339 1 C T - ReadM SNP 0045.scaffold00159 389474 1 T C - ReadM SNP 0045.scaffold00159 389665 1 T C - ReadM SNP 0045.scaffold00159 389677 1 A G - ReadM SNP 0045.scaffold00159 389698 1 T C - ReadM SNP 0045.scaffold00159 389708 1 C T - ReadM SNP 0045.scaffold00159 389809 1 C T - ReadM SNP 0045.scaffold00159 389832 1 T A - ReadM SNP 0045.scaffold00159 389872 1 A G - ReadM INDEL 0045.scaffold00159 389924 2 .. GT - Both SNP 0045.scaffold00159 390387 1 A T scaffold20949 Both SNP 0045.scaffold00159 390466 1 C G scaffold20949 Both SNP 0045.scaffold00159 390535 1 T A scaffold20949 Both SNP 0045.scaffold00159 390545 1 T C scaffold20949 Both SNP 0045.scaffold00159 390745 1 T C scaffold20949 Both SNP 0045.scaffold00159 390818 1 T C scaffold20949 Both SNP 0045.scaffold00159 390821 1 A G scaffold20949 Both SNP 0045.scaffold00159 390832 1 G A scaffold20949 ScafM INDEL 0045.scaffold00159 391027 7 ....... ACTTATG scaffold20949 Both SNP 0045.scaffold00159 391069 1 A G scaffold20949 Both INDEL 0045.scaffold00159 391124 1 T . scaffold20949 Both SNP 0045.scaffold00159 391140 1 A G scaffold20949 Both SNP 0045.scaffold00159 391149 1 T G scaffold20949 Both SNP 0045.scaffold00159 391281 1 T G scaffold20949 Both SNP 0045.scaffold00159 391416 1 C T scaffold20949 Both SNP 0045.scaffold00159 391478 1 T G scaffold20949 Both SNP 0045.scaffold00159 391519 1 G A scaffold20949 Both SNP 0045.scaffold00159 391566 1 T C scaffold20949 ScafM INDEL 0045.scaffold00159 391597 3 CTA ... scaffold20949 Both INDEL 0045.scaffold00159 391676 1 T . scaffold20949 Both SNP 0045.scaffold00159 391948 1 A G scaffold20949 Both INDEL 0045.scaffold00159 391985 1 . T scaffold20949 ScafM SNP 0045.scaffold00159 392036 1 T C scaffold20949 ScafM SNP 0045.scaffold00159 392708 1 A G scaffold27292 ReadM SNP 0045.scaffold00159 392956 1 C G - ScafM INDEL 0045.scaffold00159 393539 8 GACTAATA ........ scaffold27292 Both SNP 0045.scaffold00159 393668 1 A C scaffold27292 ScafM SNP 0045.scaffold00159 393719 1 T G scaffold27292 ScafM SNP 0045.scaffold00159 393744 1 A C scaffold27292 ScafM SNP 0045.scaffold00159 393749 1 G A scaffold27292 ScafM SNP 0045.scaffold00159 393771 1 T A scaffold27292 ScafM SNP 0045.scaffold00159 393788 1 T G scaffold27292 ScafM SNP 0045.scaffold00159 393797 1 T C scaffold27292 Both SNP 0045.scaffold00159 394210 1 T A scaffold27292 Both SNP 0045.scaffold00159 394263 1 A G scaffold27292 Both SNP 0045.scaffold00159 394307 1 T A scaffold27292 Both SNP 0045.scaffold00159 394358 1 A T scaffold27292 ScafM SNP 0045.scaffold00159 394441 1 A G scaffold27292 ScafM INDEL 0045.scaffold00159 394554 8 ........ CATTATGA scaffold27292 ScafM SNP 0045.scaffold00159 394644 1 C T scaffold27292 ScafM SNP 0045.scaffold00159 394652 1 A G scaffold27292 ScafM SNP 0045.scaffold00159 394657 1 C T scaffold27292 Both SNP 0045.scaffold00159 394681 1 A G scaffold27292 Both SNP 0045.scaffold00159 394717 1 T G scaffold27292 Both SNP 0045.scaffold00159 394726 1 C G scaffold27292 ScafM INDEL 0045.scaffold00159 394769 1 . A scaffold27292 ScafM SNP 0045.scaffold00159 394782 1 A T scaffold27292 ScafM SNP 0045.scaffold00159 394791 1 C A scaffold27292 ScafM SNP 0045.scaffold00159 394795 1 C T scaffold27292 Both SNP 0045.scaffold00159 394848 1 T C scaffold27292 ScafM SNP 0045.scaffold00159 394893 1 A T scaffold27292 Both SNP 0045.scaffold00159 394972 1 C T scaffold27292 ScafM SNP 0045.scaffold00159 395069 1 A G scaffold27292 Both SNP 0045.scaffold00159 395173 1 C T scaffold27292 ReadM SNP 0045.scaffold00159 395208 1 T G - ScafM SNP 0045.scaffold00159 396013 1 C T scaffold27292 ScafM SNP 0045.scaffold00159 396020 1 G C scaffold27292 ScafM INDEL 0045.scaffold00159 396036 1 C . scaffold27292 ScafM SNP 0045.scaffold00159 396082 1 A G scaffold27292 ScafM SNP 0045.scaffold00159 396166 1 A G scaffold27292 ScafM INDEL 0045.scaffold00159 397552 3 AAT ... scaffold7030 ScafM INDEL 0045.scaffold00159 397558 4 CATA .... scaffold7030 ScafM INDEL 0045.scaffold00159 397564 2 TC .. scaffold7030 ScafM SNP 0045.scaffold00159 397591 2 GT TC scaffold7030 ScafM SNP 0045.scaffold00159 397596 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 397630 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 397652 2 TT CA scaffold7030 ScafM SNP 0045.scaffold00159 397733 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 397735 1 A G scaffold7030 ScafM INDEL 0045.scaffold00159 397758 15 ATCATATTTGTGGTC ............... scaffold7030 Both SNP 0045.scaffold00159 397832 1 A T scaffold7030 ScafM SNP 0045.scaffold00159 397959 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 397971 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 397976 1 G C scaffold7030 ScafM SNP 0045.scaffold00159 397986 1 C T scaffold7030 Both SNP 0045.scaffold00159 398028 1 A G scaffold7030 Both SNP 0045.scaffold00159 398075 1 A G scaffold7030 Both SNP 0045.scaffold00159 398116 1 A T scaffold7030 ReadM SNP 0045.scaffold00159 398225 1 C T - ReadM SNP 0045.scaffold00159 398451 1 A G - ReadM INDEL 0045.scaffold00159 398547 1 T . - ReadM SNP 0045.scaffold00159 398598 1 C T - ReadM SNP 0045.scaffold00159 398658 1 G A - ReadM SNP 0045.scaffold00159 398742 1 G T - ReadM SNP 0045.scaffold00159 398929 1 G A - ReadM SNP 0045.scaffold00159 398943 1 T C - ReadM SNP 0045.scaffold00159 398967 1 T C - ReadM SNP 0045.scaffold00159 398997 1 T C - ReadM SNP 0045.scaffold00159 399041 1 T C - ReadM SNP 0045.scaffold00159 399102 1 A G - ReadM SNP 0045.scaffold00159 399121 1 T A - ReadM SNP 0045.scaffold00159 399188 1 T C - ReadM SNP 0045.scaffold00159 399355 1 C T - ReadM SNP 0045.scaffold00159 399419 1 A C - ReadM SNP 0045.scaffold00159 399459 1 A G - ReadM SNP 0045.scaffold00159 399485 1 G A - ReadM SNP 0045.scaffold00159 399549 1 C T - Both SNP 0045.scaffold00159 399726 1 A T scaffold7030 Both SNP 0045.scaffold00159 399732 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 399768 1 C G scaffold7030 ScafM INDEL 0045.scaffold00159 399802 6 ATGTTT ...... scaffold7030 ScafM INDEL 0045.scaffold00159 399811 3 CCT ... scaffold7030 ScafM SNP 0045.scaffold00159 399828 1 G A scaffold7030 ScafM INDEL 0045.scaffold00159 399854 1 C . scaffold7030 ScafM SNP 0045.scaffold00159 399878 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 399883 1 C T scaffold7030 ScafM INDEL 0045.scaffold00159 399889 1 . C scaffold7030 ScafM SNP 0045.scaffold00159 399996 1 A T scaffold7030 Both SNP 0045.scaffold00159 400027 1 A C scaffold7030 ScafM SNP 0045.scaffold00159 400123 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 400152 1 C T scaffold7030 ScafM INDEL 0045.scaffold00159 400229 3 ... TAT scaffold7030 ScafM INDEL 0045.scaffold00159 400234 1 . A scaffold7030 ScafM INDEL 0045.scaffold00159 400247 2 .. TG scaffold7030 ScafM INDEL 0045.scaffold00159 400255 4 .... TATA scaffold7030 ScafM SNP 0045.scaffold00159 400333 1 C G scaffold7030 ScafM SNP 0045.scaffold00159 400501 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 400595 1 A T scaffold7030 ScafM INDEL 0045.scaffold00159 400597 3 ... TGT scaffold7030 ScafM SNP 0045.scaffold00159 400603 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 400656 1 T A scaffold7030 ScafM SNP 0045.scaffold00159 400688 1 A C scaffold7030 ScafM SNP 0045.scaffold00159 400716 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 400720 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 400784 1 A T scaffold7030 ScafM SNP 0045.scaffold00159 400786 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 400808 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 400827 1 C G scaffold7030 ScafM SNP 0045.scaffold00159 400897 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 401018 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 401035 1 A C scaffold7030 ScafM SNP 0045.scaffold00159 401363 1 C A scaffold7030 ScafM SNP 0045.scaffold00159 401369 2 AA TG scaffold7030 ScafM INDEL 0045.scaffold00159 401396 1 A . scaffold7030 ScafM SNP 0045.scaffold00159 401447 1 G A scaffold7030 ScafM INDEL 0045.scaffold00159 401551 8 ........ ACTATCAA scaffold7030 ScafM SNP 0045.scaffold00159 401575 1 G A scaffold7030 Both SNP 0045.scaffold00159 401623 1 C A scaffold7030 Both INDEL 0045.scaffold00159 401690 1 A . scaffold7030 Both SNP 0045.scaffold00159 401703 1 G C scaffold7030 Both SNP 0045.scaffold00159 401713 1 C T scaffold7030 Both INDEL 0045.scaffold00159 401872 1 . G scaffold7030 ScafM SNP 0045.scaffold00159 401879 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 401932 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 401973 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 401978 1 G C scaffold7030 ScafM SNP 0045.scaffold00159 402087 1 G T scaffold7030 ReadM SNP 0045.scaffold00159 402162 1 G A - ReadM SNP 0045.scaffold00159 402179 1 A C - Both SNP 0045.scaffold00159 402246 1 A G scaffold7030 Both SNP 0045.scaffold00159 402289 1 G T scaffold7030 Both SNP 0045.scaffold00159 402362 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 402400 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 402403 1 A G scaffold7030 ScafM INDEL 0045.scaffold00159 402407 1 T . scaffold7030 ScafM SNP 0045.scaffold00159 402411 3 TTT GAA scaffold7030 ScafM SNP 0045.scaffold00159 402419 1 A T scaffold7030 ScafM SNP 0045.scaffold00159 402461 1 G A scaffold7030 ScafM INDEL 0045.scaffold00159 402469 1 T . scaffold7030 ScafM SNP 0045.scaffold00159 402486 1 A G scaffold7030 ScafM INDEL 0045.scaffold00159 402488 2 AT .G scaffold7030 ScafM INDEL 0045.scaffold00159 402492 1 T . scaffold7030 ScafM SNP 0045.scaffold00159 402494 2 AA CT scaffold7030 Both SNP 0045.scaffold00159 402716 1 C T scaffold7030 Both SNP 0045.scaffold00159 402809 1 T C scaffold7030 Both SNP 0045.scaffold00159 402849 1 G A scaffold7030 Both SNP 0045.scaffold00159 402886 1 G A scaffold7030 Both SNP 0045.scaffold00159 402961 1 G A scaffold7030 ScafM INDEL 0045.scaffold00159 402980 2 AA .T scaffold7030 ScafM SNP 0045.scaffold00159 402985 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 402987 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 402997 1 T G scaffold7030 Both SNP 0045.scaffold00159 403034 1 T C scaffold7030 Both SNP 0045.scaffold00159 403067 1 T G scaffold7030 Both SNP 0045.scaffold00159 403297 1 C T scaffold7030 Both INDEL 0045.scaffold00159 403355 1 G . scaffold7030 Both SNP 0045.scaffold00159 403414 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 403461 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 403474 1 T C scaffold7030 ScafM INDEL 0045.scaffold00159 403503 8 AGGCCATT ........ scaffold7030 ScafM SNP 0045.scaffold00159 403577 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 403607 2 AA GC scaffold7030 ScafM SNP 0045.scaffold00159 403625 1 C G scaffold7030 ScafM SNP 0045.scaffold00159 403631 1 C A scaffold7030 ScafM SNP 0045.scaffold00159 403635 1 G T scaffold7030 ScafM SNP 0045.scaffold00159 403655 1 T C scaffold7030 ScafM INDEL 0045.scaffold00159 403658 3 TCA ... scaffold7030 ScafM SNP 0045.scaffold00159 403662 1 G A scaffold7030 ScafM INDEL 0045.scaffold00159 403667 1 A . scaffold7030 ScafM INDEL 0045.scaffold00159 403670 3 CCC ..G scaffold7030 ScafM SNP 0045.scaffold00159 403674 1 C T scaffold7030 ScafM INDEL 0045.scaffold00159 403680 6 GTTTTG ...... scaffold7030 ScafM INDEL 0045.scaffold00159 403696 5 CAACT ..... scaffold7030 ScafM INDEL 0045.scaffold00159 403702 2 CA .. scaffold7030 ScafM SNP 0045.scaffold00159 403705 1 C G scaffold7030 ScafM INDEL 0045.scaffold00159 403709 4 TGAC .... scaffold7030 ScafM INDEL 0045.scaffold00159 403715 6 TTTCAT ...... scaffold7030 ScafM INDEL 0045.scaffold00159 403725 2 AG .. scaffold7030 ScafM INDEL 0045.scaffold00159 403730 8 AAAAAACC .......G scaffold7030 ScafM INDEL 0045.scaffold00159 403740 6 ATGAAA ...... scaffold7030 ScafM INDEL 0045.scaffold00159 403748 3 TTA ... scaffold7030 ScafM SNP 0045.scaffold00159 403758 2 GA TT scaffold7030 ScafM SNP 0045.scaffold00159 403771 2 TG GC scaffold7030 ScafM SNP 0045.scaffold00159 403774 1 C A scaffold7030 ScafM SNP 0045.scaffold00159 403779 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 403782 1 T A scaffold7030 ScafM SNP 0045.scaffold00159 403794 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 403799 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 403803 1 C G scaffold7030 ScafM SNP 0045.scaffold00159 403808 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 403812 1 G C scaffold7030 ScafM SNP 0045.scaffold00159 403821 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 403828 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 403856 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 403889 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 403895 1 A C scaffold7030 ScafM SNP 0045.scaffold00159 403906 2 CA TG scaffold7030 ScafM SNP 0045.scaffold00159 403909 2 AG GT scaffold7030 ScafM INDEL 0045.scaffold00159 403911 1 . C scaffold7030 ScafM INDEL 0045.scaffold00159 403912 1 . C scaffold7030 ScafM INDEL 0045.scaffold00159 403927 7 GATAAGG ....... scaffold7030 ScafM INDEL 0045.scaffold00159 403935 6 CCTTTT ...... scaffold7030 ScafM SNP 0045.scaffold00159 403948 2 TT CA scaffold7030 ScafM SNP 0045.scaffold00159 403952 2 TA AC scaffold7030 ScafM SNP 0045.scaffold00159 403956 1 G T scaffold7030 ScafM INDEL 0045.scaffold00159 403969 1 C . scaffold7030 ScafM INDEL 0045.scaffold00159 403975 2 .. TG scaffold7030 ScafM SNP 0045.scaffold00159 403976 1 C A scaffold7030 ScafM INDEL 0045.scaffold00159 403977 1 . C scaffold7030 ScafM SNP 0045.scaffold00159 403982 1 T A scaffold7030 ScafM SNP 0045.scaffold00159 403987 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 403993 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404008 1 C G scaffold7030 ScafM SNP 0045.scaffold00159 404011 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 404017 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 404030 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404095 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 404106 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404133 1 A C scaffold7030 ScafM SNP 0045.scaffold00159 404154 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404158 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 404161 1 C T scaffold7030 ScafM SNP 0045.scaffold00159 404163 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404166 1 T C scaffold7030 ScafM SNP 0045.scaffold00159 404168 1 G A scaffold7030 ScafM SNP 0045.scaffold00159 404175 1 T A scaffold7030 ScafM SNP 0045.scaffold00159 404178 1 A G scaffold7030 ScafM SNP 0045.scaffold00159 404185 2 TA CC scaffold7030 ScafM SNP 0045.scaffold00159 404193 1 A C scaffold7030 ScafM INDEL 0045.scaffold00159 404198 1 C . scaffold7030 ScafM SNP 0045.scaffold00159 404200 1 A T scaffold7030 ScafM INDEL 0045.scaffold00159 418856 1 A . scaffold1392 ScafM SNP 0045.scaffold00159 418859 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 418861 2 GT CA scaffold1392 ScafM INDEL 0045.scaffold00159 418864 1 A . scaffold1392 ScafM INDEL 0045.scaffold00159 418925 1 . A scaffold1392 ScafM SNP 0045.scaffold00159 418955 1 A C scaffold1392 ScafM INDEL 0045.scaffold00159 418986 1 A . scaffold1392 ScafM SNP 0045.scaffold00159 418995 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 419073 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 419105 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 419116 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 419123 1 C T scaffold1392 ScafM INDEL 0045.scaffold00159 419223 1 T . scaffold1392 ScafM SNP 0045.scaffold00159 419226 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 419274 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 419307 1 T . scaffold1392 ScafM SNP 0045.scaffold00159 419316 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 419322 2 AT .G scaffold1392 Both INDEL 0045.scaffold00159 419528 1 . T scaffold1392 ScafM SNP 0045.scaffold00159 419539 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 419549 1 T C scaffold1392 Both SNP 0045.scaffold00159 419683 1 G A scaffold1392 ReadM SNP 0045.scaffold00159 419969 1 A C - Both SNP 0045.scaffold00159 420060 1 T A scaffold1392 ReadM INDEL 0045.scaffold00159 420476 2 TT .. - ReadM SNP 0045.scaffold00159 420533 1 T C - ReadM SNP 0045.scaffold00159 420574 1 G T - Both SNP 0045.scaffold00159 420656 1 T C scaffold1392 Both SNP 0045.scaffold00159 420852 1 T G scaffold1392 Both SNP 0045.scaffold00159 421163 1 T C scaffold1392 Both SNP 0045.scaffold00159 421280 1 A G scaffold1392 Both SNP 0045.scaffold00159 421407 1 T A scaffold1392 Both SNP 0045.scaffold00159 421575 1 A C scaffold1392 Both SNP 0045.scaffold00159 422016 1 G T scaffold1392 Both SNP 0045.scaffold00159 422248 1 T A scaffold1392 ScafM INDEL 0045.scaffold00159 422445 5 ..... CAGGT scaffold1392 Both SNP 0045.scaffold00159 422564 1 A G scaffold1392 Both INDEL 0045.scaffold00159 422627 2 AT .. scaffold1392 Both SNP 0045.scaffold00159 422821 1 A G scaffold1392 Both SNP 0045.scaffold00159 422839 1 A G scaffold1392 Both SNP 0045.scaffold00159 422943 1 C T scaffold1392 Both SNP 0045.scaffold00159 423517 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 423554 1 T A scaffold1392 Both SNP 0045.scaffold00159 423613 1 C T scaffold1392 ReadM INDEL 0045.scaffold00159 423627 1 G . - Both INDEL 0045.scaffold00159 423628 1 T . scaffold1392 Both SNP 0045.scaffold00159 423704 1 A T scaffold1392 Both SNP 0045.scaffold00159 423827 1 G C scaffold1392 Both SNP 0045.scaffold00159 423957 1 G T scaffold1392 Both SNP 0045.scaffold00159 423969 1 T C scaffold1392 Both INDEL 0045.scaffold00159 424055 1 T . scaffold1392 Both SNP 0045.scaffold00159 424452 1 A T scaffold1392 Both SNP 0045.scaffold00159 424578 1 A G scaffold1392 ReadM INDEL 0045.scaffold00159 425098 1 . T - Both SNP 0045.scaffold00159 425188 1 T G scaffold1392 ScafM INDEL 0045.scaffold00159 425887 34 TTTATGTTAATTCAGCTCTACTGTTAACAGCTCT .................................. scaffold1392 ScafM INDEL 0045.scaffold00159 425924 6 ATATGC ...... scaffold1392 ScafM SNP 0045.scaffold00159 425951 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 425981 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 426003 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 426006 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 426041 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 426053 1 A T scaffold1392 ScafM INDEL 0045.scaffold00159 426107 2 AT .G scaffold1392 ScafM SNP 0045.scaffold00159 426120 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 426139 3 .TC AGG scaffold1392 ScafM SNP 0045.scaffold00159 426149 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 426157 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 426168 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 426194 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 426214 1 T C scaffold1392 ReadM INDEL 0045.scaffold00159 426376 1 T . - Both SNP 0045.scaffold00159 426395 1 C T scaffold1392 Both SNP 0045.scaffold00159 426620 1 C A scaffold1392 ScafM SNP 0045.scaffold00159 426941 1 G C scaffold1392 ScafM SNP 0045.scaffold00159 426957 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 427000 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 427070 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 427094 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 427105 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 427127 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 427157 1 T A scaffold1392 ScafM INDEL 0045.scaffold00159 427191 1 A . scaffold1392 ScafM SNP 0045.scaffold00159 427246 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 427252 8 ........ TCATATAT scaffold1392 ScafM INDEL 0045.scaffold00159 427272 8 TTCCTCGA ........ scaffold1392 ScafM INDEL 0045.scaffold00159 427284 1 T . scaffold1392 ScafM INDEL 0045.scaffold00159 427287 2 CC .. scaffold1392 ScafM INDEL 0045.scaffold00159 427301 1 . T scaffold1392 ScafM INDEL 0045.scaffold00159 427307 4 .... AAAC scaffold1392 ScafM SNP 0045.scaffold00159 427337 1 A T scaffold1392 ScafM INDEL 0045.scaffold00159 427345 4 AAGG .... scaffold1392 ScafM SNP 0045.scaffold00159 427395 1 A C scaffold1392 ScafM SNP 0045.scaffold00159 427404 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 427408 1 G T scaffold1392 ScafM SNP 0045.scaffold00159 427415 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 427420 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 427436 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 427441 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 427454 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 427491 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 427508 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 428160 1 G T scaffold1392 ScafM INDEL 0045.scaffold00159 428182 1 A . scaffold1392 ScafM INDEL 0045.scaffold00159 428184 3 ATA .CC scaffold1392 ScafM INDEL 0045.scaffold00159 428188 2 GA .. scaffold1392 ScafM INDEL 0045.scaffold00159 428192 2 TA .. scaffold1392 ScafM INDEL 0045.scaffold00159 428196 1 A . scaffold1392 ScafM INDEL 0045.scaffold00159 428199 10 CTTATATAAT .......... scaffold1392 ScafM SNP 0045.scaffold00159 428243 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 428245 1 T C scaffold1392 ScafM INDEL 0045.scaffold00159 428269 3 ... ATT scaffold1392 Both SNP 0045.scaffold00159 428423 1 A G scaffold1392 Both SNP 0045.scaffold00159 428426 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 428467 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 428485 1 C A scaffold1392 ScafM SNP 0045.scaffold00159 428505 1 C T scaffold1392 ScafM INDEL 0045.scaffold00159 428531 2 TT .. scaffold1392 ScafM SNP 0045.scaffold00159 428587 2 TC AT scaffold1392 Both SNP 0045.scaffold00159 428624 1 A G scaffold1392 Both SNP 0045.scaffold00159 428633 1 A C scaffold1392 ScafM SNP 0045.scaffold00159 428726 2 AT TA scaffold1392 ScafM SNP 0045.scaffold00159 428729 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 428732 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 428739 1 A T scaffold1392 Both SNP 0045.scaffold00159 428783 1 A G scaffold1392 Both SNP 0045.scaffold00159 428867 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429008 1 T G scaffold1392 ScafM INDEL 0045.scaffold00159 429010 2 .. CA scaffold1392 ScafM SNP 0045.scaffold00159 429020 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429054 1 G T scaffold1392 ScafM SNP 0045.scaffold00159 429063 2 CG GA scaffold1392 ScafM SNP 0045.scaffold00159 429100 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429106 1 T A scaffold1392 ScafM INDEL 0045.scaffold00159 429110 2 .. TG scaffold1392 ScafM SNP 0045.scaffold00159 429119 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 429237 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 429250 1 G C scaffold1392 ScafM SNP 0045.scaffold00159 429261 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429265 1 C A scaffold1392 ScafM INDEL 0045.scaffold00159 429274 3 ATG ... scaffold1392 ScafM INDEL 0045.scaffold00159 429304 8 ........ ACTTGTGA scaffold1392 ScafM INDEL 0045.scaffold00159 429338 1 . T scaffold1392 ScafM SNP 0045.scaffold00159 429346 1 C A scaffold1392 ScafM SNP 0045.scaffold00159 429352 1 A C scaffold1392 ScafM SNP 0045.scaffold00159 429355 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429362 1 G T scaffold1392 ScafM INDEL 0045.scaffold00159 429378 2 TT .. scaffold1392 ScafM SNP 0045.scaffold00159 429385 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 429388 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429402 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429406 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 429409 2 AA GG scaffold1392 ScafM SNP 0045.scaffold00159 429415 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429421 1 A T scaffold1392 ScafM INDEL 0045.scaffold00159 429426 6 ...... TGCCAC scaffold1392 ScafM SNP 0045.scaffold00159 429430 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 429433 1 T C scaffold1392 ScafM INDEL 0045.scaffold00159 429436 1 G . scaffold1392 ScafM SNP 0045.scaffold00159 429440 1 G C scaffold1392 ScafM SNP 0045.scaffold00159 429443 1 A G scaffold1392 ScafM INDEL 0045.scaffold00159 429453 1 T . scaffold1392 ScafM INDEL 0045.scaffold00159 429455 1 . G scaffold1392 ScafM SNP 0045.scaffold00159 429463 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 429475 1 G C scaffold1392 ScafM SNP 0045.scaffold00159 429489 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 429492 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 429497 1 A G scaffold1392 ScafM INDEL 0045.scaffold00159 429506 1 . A scaffold1392 ScafM SNP 0045.scaffold00159 429508 2 CC TT scaffold1392 ScafM SNP 0045.scaffold00159 429511 2 CA GG scaffold1392 ScafM SNP 0045.scaffold00159 429514 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 429517 1 T G scaffold1392 ScafM INDEL 0045.scaffold00159 429524 1 A . scaffold1392 ScafM SNP 0045.scaffold00159 429533 1 G T scaffold1392 ScafM INDEL 0045.scaffold00159 429542 1 . G scaffold1392 ScafM INDEL 0045.scaffold00159 429546 3 ..A GGT scaffold1392 ScafM SNP 0045.scaffold00159 429549 1 T C scaffold1392 ScafM INDEL 0045.scaffold00159 429550 1 . A scaffold1392 ScafM INDEL 0045.scaffold00159 429552 1 . T scaffold1392 ScafM SNP 0045.scaffold00159 429555 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 429559 3 ... CAT scaffold1392 ScafM INDEL 0045.scaffold00159 429561 1 . G scaffold1392 ScafM SNP 0045.scaffold00159 429563 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 429565 1 C G scaffold1392 ScafM INDEL 0045.scaffold00159 429567 3 ..C AAA scaffold1392 ScafM INDEL 0045.scaffold00159 429569 2 .. GG scaffold1392 ScafM INDEL 0045.scaffold00159 429570 1 . A scaffold1392 ScafM INDEL 0045.scaffold00159 429573 4 .... AAAT scaffold1392 ScafM INDEL 0045.scaffold00159 429579 8 ........ CTGATGGT scaffold1392 ScafM SNP 0045.scaffold00159 429593 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 429599 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429610 1 C G scaffold1392 ScafM SNP 0045.scaffold00159 429628 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 429637 2 CG GA scaffold1392 ScafM SNP 0045.scaffold00159 429660 2 TG CC scaffold1392 ScafM SNP 0045.scaffold00159 429697 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429749 2 CC TT scaffold1392 ScafM SNP 0045.scaffold00159 429792 1 C G scaffold1392 ScafM SNP 0045.scaffold00159 429808 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 429814 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 429935 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 429946 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 429965 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 429969 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 430351 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 430355 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 430366 1 A C scaffold1392 ScafM SNP 0045.scaffold00159 430379 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 430396 1 G T scaffold1392 Both SNP 0045.scaffold00159 430423 1 C G scaffold1392 Both SNP 0045.scaffold00159 430468 1 C A scaffold1392 ScafM INDEL 0045.scaffold00159 430507 1 A . scaffold1392 ScafM SNP 0045.scaffold00159 430518 2 AC GT scaffold1392 ScafM SNP 0045.scaffold00159 430560 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 430566 1 C T scaffold1392 Both SNP 0045.scaffold00159 430581 1 C T scaffold1392 Both SNP 0045.scaffold00159 430644 1 G T scaffold1392 Both INDEL 0045.scaffold00159 430778 1 . A scaffold1392 ScafM SNP 0045.scaffold00159 430891 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 430893 1 T G scaffold1392 ScafM SNP 0045.scaffold00159 430895 2 CT AA scaffold1392 ScafM SNP 0045.scaffold00159 430919 1 A G scaffold1392 ScafM INDEL 0045.scaffold00159 430921 1 . G scaffold1392 ScafM SNP 0045.scaffold00159 430966 1 A T scaffold1392 ScafM SNP 0045.scaffold00159 430991 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 431007 1 T A scaffold1392 ScafM SNP 0045.scaffold00159 431074 1 G C scaffold1392 ScafM INDEL 0045.scaffold00159 431081 5 ..... GCTCT scaffold1392 Both SNP 0045.scaffold00159 431108 1 T C scaffold1392 Both SNP 0045.scaffold00159 431131 1 C G scaffold1392 Both SNP 0045.scaffold00159 431290 1 T C scaffold1392 Both INDEL 0045.scaffold00159 431293 1 T . scaffold1392 ScafM SNP 0045.scaffold00159 431307 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 431335 1 T C scaffold1392 ScafM INDEL 0045.scaffold00159 431368 1 C . scaffold1392 ScafM SNP 0045.scaffold00159 431377 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 431423 1 . A scaffold1392 ScafM SNP 0045.scaffold00159 431438 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 431444 1 G A scaffold1392 ScafM SNP 0045.scaffold00159 431487 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 431513 1 C G scaffold1392 ScafM SNP 0045.scaffold00159 431526 1 A G scaffold1392 ScafM SNP 0045.scaffold00159 431535 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 431541 5 ..... TTTGA scaffold1392 Both SNP 0045.scaffold00159 431566 1 T G scaffold1392 Both SNP 0045.scaffold00159 431680 1 T A scaffold1392 Both SNP 0045.scaffold00159 431706 1 C T scaffold1392 ScafM SNP 0045.scaffold00159 431783 1 T C scaffold1392 ScafM INDEL 0045.scaffold00159 431785 3 CTC ... scaffold1392 ScafM SNP 0045.scaffold00159 431808 1 A T scaffold1392 ScafM INDEL 0045.scaffold00159 431822 4 .... ATAT scaffold1392 ScafM SNP 0045.scaffold00159 431824 1 T C scaffold1392 ScafM SNP 0045.scaffold00159 431863 1 A G scaffold1392 ScafM INDEL 0045.scaffold00159 431893 1 . A scaffold1392 ScafM INDEL 0045.scaffold00159 431894 1 . C scaffold1392 ScafM SNP 0045.scaffold00159 431947 3 AAA GGT scaffold1392 ScafM SNP 0045.scaffold00159 431972 2 TA CT scaffold1392 Both SNP 0045.scaffold00159 432114 1 T C scaffold1392 Both SNP 0045.scaffold00159 432124 1 C G scaffold1392 Both SNP 0045.scaffold00159 432147 1 T C scaffold1392 Both SNP 0045.scaffold00159 432171 1 T A scaffold1392 Both SNP 0045.scaffold00159 432318 1 G T scaffold1392 ScafM SNP 0045.scaffold00159 432346 1 G C scaffold1392 ScafM SNP 0045.scaffold00159 432357 1 C T scaffold1392 ScafM INDEL 0045.scaffold00159 432360 1 . A scaffold1392 ScafM SNP 0045.scaffold00159 432371 2 TA AC scaffold1392 ScafM SNP 0045.scaffold00159 432396 1 T A scaffold1392 Both SNP 0045.scaffold00159 432426 1 A C scaffold1392 Both SNP 0045.scaffold00159 432442 1 G C scaffold1392 Both SNP 0045.scaffold00159 432482 1 G A scaffold1392 ScafM INDEL 0045.scaffold00159 437457 15 ............... GTTTTGGGGGGGGGG scaffold1392 Both INDEL 0045.scaffold00159 449238 1 . A scaffold1392 ReadM SNP 0045.scaffold00159 449909 1 T C - ReadM SNP 0045.scaffold00159 451912 1 A C - ReadM SNP 0045.scaffold00159 460897 1 A G - Both SNP 0045.scaffold00159 467276 1 C T scaffold4673 ReadM SNP 0045.scaffold00159 477014 1 C T - ScafM SNP 0045.scaffold00159 479410 1 G A scaffold4673 ScafM INDEL 0045.scaffold00159 479508 25 ATCTAATAATATCTCATGCTAGTTT ......................... scaffold4673 ReadM SNP 0045.scaffold00159 490069 1 A G - ReadM SNP 0045.scaffold00159 509734 1 T C - ScafM INDEL 0045.scaffold00159 512506 1 . T scaffold1532 ReadM SNP 0045.scaffold00159 527534 1 A C - ReadM SNP 0045.scaffold00159 533007 1 G A - Both SNP 0045.scaffold00159 535493 1 A T scaffold1532 ReadM SNP 0045.scaffold00159 546144 1 G A - ReadM SNP 0045.scaffold00159 551881 1 G A - Both SNP 0045.scaffold00159 551958 1 C T scaffold1532 ScafM SNP 0045.scaffold00159 556473 1 A G scaffold1532 ScafM SNP 0045.scaffold00159 567321 1 C A scaffold1532 ScafM SNP 0045.scaffold00159 600157 1 A G scaffold13869 ScafM SNP 0045.scaffold00159 600175 1 A G scaffold13869 ScafM SNP 0045.scaffold00159 600198 1 A G scaffold13869 ScafM INDEL 0045.scaffold00159 600205 4 ATTA .... scaffold13869 ScafM SNP 0045.scaffold00159 600223 1 T A scaffold13869 ScafM SNP 0045.scaffold00159 600228 1 T A scaffold13869 ScafM SNP 0045.scaffold00159 600233 1 A G scaffold13869 ScafM SNP 0045.scaffold00159 600254 1 A G scaffold13869 ScafM SNP 0045.scaffold00159 600274 1 A G scaffold13869 ScafM SNP 0045.scaffold00159 600279 1 G C scaffold13869 ReadM INDEL 0045.scaffold00159 600644 1 . T - ScafM SNP 0045.scaffold00159 602029 1 A G C13497948 ScafM SNP 0045.scaffold00159 602040 3 TCA GTG C13497948 ScafM SNP 0045.scaffold00159 602053 1 C T C13497948 ScafM SNP 0045.scaffold00159 602068 1 C A C13497948 ScafM SNP 0045.scaffold00159 602072 1 C T C13497948 ScafM SNP 0045.scaffold00159 602100 1 A G C13497948 ScafM SNP 0045.scaffold00159 602109 1 G C C13497948 ScafM SNP 0045.scaffold00159 602139 1 A G C13497948 ScafM SNP 0045.scaffold00159 602143 1 G A C13497948 ScafM INDEL 0045.scaffold00159 606769 84 .................................................................................... GTAAAACCTTTTTTTACAATTTGCAAATAACGGATGTGCAAATAATTTTATAATACATCCACTTTTTAGCATGGTGAATATCCC scaffold1371 ScafM SNP 0045.scaffold00159 608479 1 A G scaffold1371 ReadM SNP 0045.scaffold00159 613973 1 A C - ScafM SNP 0045.scaffold00159 622014 1 A C scaffold1371 ScafM SNP 0045.scaffold00159 622066 1 C T scaffold1371 ScafM INDEL 0045.scaffold00159 643554 2 GT .A scaffold1371 ScafM INDEL 0045.scaffold00159 653589 5 AACCT ..... scaffold1371 ScafM INDEL 0045.scaffold00159 653596 2 AT .. scaffold1371 ScafM SNP 0045.scaffold00159 653601 2 CC TT scaffold1371 ScafM SNP 0045.scaffold00159 653604 3 TTT GAA scaffold1371 ScafM SNP 0045.scaffold00159 653608 1 C A scaffold1371 ScafM SNP 0045.scaffold00159 653610 2 CC AG scaffold1371 ScafM SNP 0045.scaffold00159 653613 1 C A scaffold1371 ScafM INDEL 0045.scaffold00159 653616 3 TTC .GA scaffold1371 ScafM SNP 0045.scaffold00159 653620 1 C G scaffold1371 ScafM SNP 0045.scaffold00159 653622 1 C G scaffold1371 ScafM SNP 0045.scaffold00159 653627 1 C T scaffold1371 ScafM SNP 0045.scaffold00159 653630 1 C A scaffold1371 ScafM SNP 0045.scaffold00159 653647 1 G A scaffold1371 ScafM SNP 0045.scaffold00159 653653 1 T C scaffold1371 ScafM INDEL 0045.scaffold00159 653657 1 A . scaffold1371 ScafM SNP 0045.scaffold00159 653666 1 C A scaffold1371 ScafM SNP 0045.scaffold00159 653686 1 A G scaffold1371 ScafM INDEL 0045.scaffold00159 655196 2 AG .. scaffold14920 Both INDEL 0045.scaffold00159 655961 1 . T scaffold14920 ScafM INDEL 0045.scaffold00159 662012 1 T . scaffold14920 ScafM SNP 0045.scaffold00159 662014 1 G C scaffold14920 ScafM SNP 0045.scaffold00159 662016 2 TA AT scaffold14920 Both SNP 0045.scaffold00159 674570 1 T A scaffold3246 ScafM INDEL 0045.scaffold00159 676653 4 .... AAAA scaffold3246 ScafM INDEL 0045.scaffold00159 677107 1 . A scaffold3246 ScafM SNP 0045.scaffold00159 677234 1 G A scaffold3246 ScafM SNP 0045.scaffold00159 697459 1 C A scaffold3246 ScafM SNP 0045.scaffold00159 697629 1 A G scaffold3246 ScafM SNP 0045.scaffold00159 697889 1 T C scaffold3246 ScafM SNP 0045.scaffold00159 698039 1 C T scaffold3246 ScafM SNP 0045.scaffold00159 698113 1 G A scaffold3246 ScafM SNP 0045.scaffold00159 720611 1 C G scaffold3246 ScafM INDEL 0045.scaffold00159 722092 1 . G scaffold3246 ReadM INDEL 0045.scaffold00159 722906 1 . A - ScafM INDEL 0045.scaffold00159 737958 61 AATAGAATTCAATGAAATACTTGTACACTAAATTACGTCTTCTCCCACCCACCCACCCACC ............................................................. scaffold3246 ScafM INDEL 0045.scaffold00159 739740 1 . T scaffold3246 ScafM SNP 0045.scaffold00159 740054 3 TAA ATT scaffold3246 Both SNP 0045.scaffold00159 744474 1 A C scaffold3246 ReadM INDEL 0045.scaffold00159 745691 1 T . - Both SNP 0045.scaffold00159 750314 1 A G scaffold3246 ScafM INDEL 0045.scaffold00159 750625 1 . A scaffold3246 ScafM SNP 0045.scaffold00159 760411 1 C A scaffold3106 ScafM SNP 0045.scaffold00159 760465 1 T C scaffold3106 ScafM SNP 0045.scaffold00159 760539 1 T A scaffold3106 ScafM SNP 0045.scaffold00159 760568 1 A G scaffold3106 ScafM SNP 0045.scaffold00159 760571 1 T C scaffold3106 ScafM SNP 0045.scaffold00159 760595 1 A C scaffold3106 ScafM INDEL 0045.scaffold00159 760716 3 ... AAG scaffold3106 ScafM SNP 0045.scaffold00159 760807 1 A C scaffold3106 ScafM INDEL 0045.scaffold00159 760838 1 . A scaffold3106 Both SNP 0045.scaffold00159 774979 1 T C scaffold3246 Both SNP 0045.scaffold00159 777511 1 C A scaffold3246 Both SNP 0045.scaffold00159 779689 1 T G scaffold3246 ScafM INDEL 0045.scaffold00159 787819 4 .... CGTA scaffold3246 ReadM SNP 0045.scaffold00159 793931 1 C T - ReadM SNP 0045.scaffold00159 797476 1 T G - ScafM INDEL 0045.scaffold00159 801112 1 . T scaffold3246 ScafM INDEL 0045.scaffold00159 801537 3 ... CAA scaffold3246 ReadM INDEL 0045.scaffold00159 801547 3 ... AAC - ScafM SNP 0045.scaffold00159 807016 1 T A scaffold3246 ScafM SNP 0045.scaffold00159 823128 1 C G scaffold29626 ScafM INDEL 0045.scaffold00159 823159 3 AGT ... scaffold29626 ScafM INDEL 0045.scaffold00159 823168 1 . T scaffold29626 ScafM SNP 0045.scaffold00159 823184 1 T C scaffold29626 ScafM SNP 0045.scaffold00159 823236 1 T C scaffold29626 ScafM SNP 0045.scaffold00159 823484 1 G A scaffold29626 ScafM SNP 0045.scaffold00159 823708 1 G A scaffold5391 ScafM SNP 0045.scaffold00159 824090 1 T A scaffold5391 ScafM SNP 0045.scaffold00159 824097 1 A T scaffold5391 ScafM SNP 0045.scaffold00159 824114 1 C A scaffold5391 ScafM SNP 0045.scaffold00159 824143 2 GT CC scaffold5391 ScafM SNP 0045.scaffold00159 824150 1 T A scaffold5391 ScafM SNP 0045.scaffold00159 824161 1 C T scaffold5391 ScafM SNP 0045.scaffold00159 824220 2 TT CA scaffold5391 ScafM SNP 0045.scaffold00159 824284 1 C T scaffold5391 ScafM INDEL 0045.scaffold00159 826649 15 ............... GGGGGGGGGGGGGGG scaffold29626 ScafM INDEL 0045.scaffold00159 839887 2 .. AA scaffold29626 Both SNP 0045.scaffold00159 841494 1 A G scaffold29626 ScafM INDEL 0045.scaffold00159 854374 1 . T scaffold11671 ScafM INDEL 0045.scaffold00159 854382 1 . T scaffold11671 ReadM SNP 0045.scaffold00159 855163 1 G A - ScafM SNP 0045.scaffold00159 857322 1 C T scaffold38854 ReadM INDEL 0045.scaffold00159 860067 1 . G - ReadM INDEL 0045.scaffold00159 860524 1 T . - ReadM INDEL 0045.scaffold00159 860526 1 C . - ScafM SNP 0045.scaffold00159 872296 1 C A scaffold495 ScafM SNP 0045.scaffold00159 872299 1 T C scaffold495 ScafM SNP 0045.scaffold00159 872377 1 G C scaffold495 ScafM SNP 0045.scaffold00159 872379 1 A G scaffold495 ScafM SNP 0045.scaffold00159 872387 1 C T scaffold495 ScafM INDEL 0045.scaffold00159 872407 2 .. GA scaffold495 ScafM SNP 0045.scaffold00159 872469 1 G A scaffold495 ScafM SNP 0045.scaffold00159 872487 1 G A scaffold495 ScafM SNP 0045.scaffold00159 872491 1 G T scaffold495 ScafM SNP 0045.scaffold00159 872499 2 TA CG scaffold495 ScafM SNP 0045.scaffold00159 872523 1 T G scaffold495 ScafM SNP 0045.scaffold00159 872544 1 C T scaffold495 ScafM INDEL 0045.scaffold00159 872546 2 .. TA scaffold495 ScafM SNP 0045.scaffold00159 872547 1 C T scaffold495 ScafM SNP 0045.scaffold00159 872572 1 T C scaffold495 ScafM SNP 0045.scaffold00159 872587 1 A C scaffold495 ScafM INDEL 0045.scaffold00159 872597 4 ATCT .... scaffold495 ScafM INDEL 0045.scaffold00159 873114 2 TT .. scaffold18917 ScafM SNP 0045.scaffold00159 873118 1 C T scaffold18917 ScafM SNP 0045.scaffold00159 873123 1 G A scaffold18917 ScafM SNP 0045.scaffold00159 873126 2 TT CA scaffold18917 ScafM INDEL 0045.scaffold00159 873158 1 A . scaffold18917 ScafM SNP 0045.scaffold00159 873161 1 A C scaffold18917 ScafM SNP 0045.scaffold00159 873169 1 G C scaffold18917 ScafM SNP 0045.scaffold00159 873196 1 G T scaffold18917 ScafM SNP 0045.scaffold00159 874467 1 A C scaffold3971 ScafM SNP 0045.scaffold00159 874520 1 A C scaffold3971 ScafM INDEL 0045.scaffold00159 874543 2 TT .C scaffold3971 ScafM SNP 0045.scaffold00159 874562 1 G A scaffold3971 ScafM SNP 0045.scaffold00159 874569 1 C A scaffold3971 ScafM SNP 0045.scaffold00159 874576 1 G A scaffold3971 ScafM SNP 0045.scaffold00159 874578 1 A C scaffold3971 ScafM SNP 0045.scaffold00159 874601 1 G T scaffold3971 ScafM SNP 0045.scaffold00159 874669 1 T A scaffold3971 ScafM SNP 0045.scaffold00159 874695 1 A G scaffold3971 ScafM SNP 0045.scaffold00159 874743 1 G T scaffold3971 ScafM SNP 0045.scaffold00159 874866 1 C G scaffold3971 ScafM SNP 0045.scaffold00159 874910 1 C T scaffold3971 ScafM SNP 0045.scaffold00159 874936 1 A G scaffold3971 ScafM SNP 0045.scaffold00159 874963 1 G A scaffold3971 ReadM SNP 0045.scaffold00159 893853 1 G T - ReadM SNP 0045.scaffold00159 898094 1 C T - ReadM SNP 0045.scaffold00159 898155 1 C T - ReadM SNP 0045.scaffold00159 906279 1 C G - ReadM SNP 0045.scaffold00159 909773 1 A G - ReadM SNP 0045.scaffold00159 916615 1 C T - ReadM SNP 0045.scaffold00159 918799 1 T C - ScafM INDEL 0045.scaffold00159 918912 1 . T scaffold1512 ScafM INDEL 0045.scaffold00159 919971 1 . A scaffold1512 ScafM SNP 0045.scaffold00159 926486 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 926502 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 926508 1 A C scaffold11287 ScafM SNP 0045.scaffold00159 926510 1 A T scaffold11287 ScafM SNP 0045.scaffold00159 926512 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 926521 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 926538 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 926603 2 CT TG scaffold11287 ScafM SNP 0045.scaffold00159 926628 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 926632 2 AT GA scaffold11287 ScafM SNP 0045.scaffold00159 926718 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 926807 1 T A scaffold11287 ScafM SNP 0045.scaffold00159 926822 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 926891 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 926911 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 926974 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 926980 1 T G scaffold11287 ScafM INDEL 0045.scaffold00159 927006 1 . T scaffold11287 ScafM SNP 0045.scaffold00159 927020 2 GT AC scaffold11287 ScafM SNP 0045.scaffold00159 927070 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 927093 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 927171 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927175 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 927184 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 927233 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 927235 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927238 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927262 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 927274 1 T A scaffold11287 ScafM SNP 0045.scaffold00159 927292 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 927306 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 927341 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 927354 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 927361 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 927381 1 C A scaffold11287 ScafM SNP 0045.scaffold00159 927396 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 927424 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927465 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 927507 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927512 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 927568 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 927602 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 927642 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 927649 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927661 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927667 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927690 1 T A scaffold11287 ScafM SNP 0045.scaffold00159 927729 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927731 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927746 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927779 1 C A scaffold11287 ScafM SNP 0045.scaffold00159 927781 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927796 1 T A scaffold11287 ScafM SNP 0045.scaffold00159 927854 2 GA AG scaffold11287 ScafM SNP 0045.scaffold00159 927888 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 927897 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 927907 1 G C scaffold11287 ScafM SNP 0045.scaffold00159 927944 2 AA GG scaffold11287 ScafM SNP 0045.scaffold00159 927967 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 927995 1 T C scaffold11287 ScafM SNP 0045.scaffold00159 928000 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 928006 1 A T scaffold11287 ScafM SNP 0045.scaffold00159 928023 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 928026 1 T G scaffold11287 ScafM INDEL 0045.scaffold00159 928030 2 .. AA scaffold11287 ScafM SNP 0045.scaffold00159 928032 2 GT CC scaffold11287 ScafM SNP 0045.scaffold00159 928036 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 928049 1 T G scaffold11287 ScafM SNP 0045.scaffold00159 928051 2 GG TT scaffold11287 ScafM INDEL 0045.scaffold00159 928071 1 G . scaffold11287 ScafM SNP 0045.scaffold00159 928078 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 928082 1 A T scaffold11287 ScafM SNP 0045.scaffold00159 928088 1 T A scaffold11287 ScafM SNP 0045.scaffold00159 928099 1 A T scaffold11287 ScafM INDEL 0045.scaffold00159 928102 1 . A scaffold11287 ScafM SNP 0045.scaffold00159 928106 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 928109 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 928111 1 A C scaffold11287 ScafM SNP 0045.scaffold00159 928120 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 928128 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 928133 1 A G scaffold11287 ScafM SNP 0045.scaffold00159 928136 1 G T scaffold11287 ScafM SNP 0045.scaffold00159 928140 1 G A scaffold11287 ScafM SNP 0045.scaffold00159 928158 1 C T scaffold11287 ScafM SNP 0045.scaffold00159 928168 1 A C scaffold11287 ScafM INDEL 0045.scaffold00159 928180 1 C . scaffold11287 ScafM INDEL 0045.scaffold00159 928183 1 C . scaffold11287 ReadM INDEL 0045.scaffold00159 958470 3 ... AAA - ScafM SNP 0045.scaffold00159 964865 1 C A scaffold18514 ScafM SNP 0045.scaffold00159 964875 3 ATG GGT scaffold18514 ScafM SNP 0045.scaffold00159 964909 1 T C scaffold18514 ScafM SNP 0045.scaffold00159 964928 1 G A scaffold18514 ScafM SNP 0045.scaffold00159 964932 1 T G scaffold18514 ScafM SNP 0045.scaffold00159 964942 2 GT TA scaffold18514 ScafM SNP 0045.scaffold00159 964964 1 T C scaffold18514 ScafM SNP 0045.scaffold00159 964972 2 TT GC scaffold18514 ScafM INDEL 0045.scaffold00159 964980 10 .......... ATGCTTCGGA scaffold18514 ScafM INDEL 0045.scaffold00159 964982 2 .. TA scaffold18514 ScafM SNP 0045.scaffold00159 964994 1 T A scaffold18514 ScafM SNP 0045.scaffold00159 964997 1 C T scaffold18514 ScafM SNP 0045.scaffold00159 965007 1 G A scaffold18514 ScafM SNP 0045.scaffold00159 965010 1 G A scaffold18514 ScafM SNP 0045.scaffold00159 965024 1 G A scaffold18514 ScafM SNP 0045.scaffold00159 965029 1 C T scaffold18514 ScafM SNP 0045.scaffold00159 965036 1 A G scaffold18514 ScafM SNP 0045.scaffold00159 965039 1 G C scaffold18514 ScafM SNP 0045.scaffold00159 965110 1 T A scaffold18514 ScafM SNP 0045.scaffold00159 965114 1 G T scaffold18514 ScafM SNP 0045.scaffold00159 965130 2 TT GC scaffold18514 ScafM SNP 0045.scaffold00159 965134 1 G A scaffold18514 ScafM SNP 0045.scaffold00159 965138 1 T G scaffold18514 ScafM SNP 0045.scaffold00159 965144 1 G T scaffold18514 ScafM SNP 0045.scaffold00159 965147 1 T C scaffold18514 ScafM SNP 0046.scaffold00167 11 1 C T scaffold9129 Both INDEL 0046.scaffold00167 83 1 . T scaffold9129 Both SNP 0046.scaffold00167 121 1 A T scaffold9129 Both SNP 0046.scaffold00167 197 1 A T scaffold9129 Both SNP 0046.scaffold00167 208 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 240 1 A T scaffold9129 ScafM SNP 0046.scaffold00167 250 1 C A scaffold9129 ScafM INDEL 0046.scaffold00167 259 5 ..... GTGGA scaffold9129 ScafM INDEL 0046.scaffold00167 273 1 G . scaffold9129 ScafM INDEL 0046.scaffold00167 290 2 TT .A scaffold9129 ScafM INDEL 0046.scaffold00167 317 2 .C AG scaffold9129 ScafM SNP 0046.scaffold00167 320 1 C A scaffold9129 ScafM SNP 0046.scaffold00167 322 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 324 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 326 4 AAAA TCTC scaffold9129 ScafM INDEL 0046.scaffold00167 333 1 A . scaffold9129 ScafM SNP 0046.scaffold00167 335 1 A C scaffold9129 ScafM INDEL 0046.scaffold00167 339 3 CCC .AA scaffold9129 ScafM INDEL 0046.scaffold00167 346 2 AG .. scaffold9129 ScafM SNP 0046.scaffold00167 382 1 A T scaffold9129 ScafM SNP 0046.scaffold00167 397 2 TA CG scaffold9129 ScafM SNP 0046.scaffold00167 410 1 A G scaffold9129 Both SNP 0046.scaffold00167 583 1 T A scaffold9129 ScafM SNP 0046.scaffold00167 667 1 T C scaffold9129 ScafM SNP 0046.scaffold00167 682 1 T A scaffold9129 ScafM SNP 0046.scaffold00167 703 1 T C scaffold9129 ScafM SNP 0046.scaffold00167 754 1 G T scaffold9129 ScafM SNP 0046.scaffold00167 1003 1 T G scaffold9129 ScafM SNP 0046.scaffold00167 1056 1 T A scaffold9129 ScafM SNP 0046.scaffold00167 1059 1 T C scaffold9129 ScafM SNP 0046.scaffold00167 1071 1 G A scaffold9129 ScafM SNP 0046.scaffold00167 1075 1 C T scaffold9129 Both SNP 0046.scaffold00167 1177 1 G A scaffold9129 Both SNP 0046.scaffold00167 1259 1 A T scaffold9129 ScafM INDEL 0046.scaffold00167 1323 7 GCCTTTG ....... scaffold9129 ScafM INDEL 0046.scaffold00167 1342 1 G . scaffold9129 ReadM SNP 0046.scaffold00167 1503 1 T C - ReadM SNP 0046.scaffold00167 1565 1 T C - ReadM SNP 0046.scaffold00167 1659 1 C T - ReadM SNP 0046.scaffold00167 1955 1 A G - ScafM SNP 0046.scaffold00167 2009 2 TC CT scaffold9129 ScafM SNP 0046.scaffold00167 2296 1 C A scaffold9129 ScafM SNP 0046.scaffold00167 2310 1 A C scaffold9129 ScafM SNP 0046.scaffold00167 2334 1 G A scaffold9129 ScafM SNP 0046.scaffold00167 2361 1 G T scaffold9129 ScafM SNP 0046.scaffold00167 2733 1 T C scaffold9129 ScafM SNP 0046.scaffold00167 2835 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 2906 1 A G scaffold9129 ScafM SNP 0046.scaffold00167 2989 1 T A scaffold9129 ScafM INDEL 0046.scaffold00167 2998 1 . A scaffold9129 ScafM INDEL 0046.scaffold00167 3027 2 .. AA scaffold9129 ScafM SNP 0046.scaffold00167 3116 1 A G scaffold9129 ScafM SNP 0046.scaffold00167 3291 1 T A scaffold9129 ScafM SNP 0046.scaffold00167 3295 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 9546 1 C T scaffold495 ScafM SNP 0046.scaffold00167 9564 1 T C scaffold495 ScafM SNP 0046.scaffold00167 9601 1 G T scaffold495 ScafM INDEL 0046.scaffold00167 9608 1 . T scaffold495 ScafM INDEL 0046.scaffold00167 9657 4 AATT .... scaffold495 ScafM SNP 0046.scaffold00167 9689 1 T A scaffold495 ScafM SNP 0046.scaffold00167 9737 1 T G scaffold495 ScafM SNP 0046.scaffold00167 9744 1 G T scaffold495 ScafM SNP 0046.scaffold00167 9778 1 A G scaffold495 ScafM SNP 0046.scaffold00167 9834 1 T G scaffold495 ScafM SNP 0046.scaffold00167 9838 1 C G scaffold495 ScafM SNP 0046.scaffold00167 9840 1 G A scaffold495 ScafM SNP 0046.scaffold00167 9850 1 C A scaffold495 ScafM SNP 0046.scaffold00167 9854 1 G T scaffold495 ScafM SNP 0046.scaffold00167 9885 1 G A scaffold495 ScafM SNP 0046.scaffold00167 9907 1 A G scaffold495 ScafM SNP 0046.scaffold00167 9925 1 G A scaffold495 ScafM SNP 0046.scaffold00167 9935 1 G T scaffold495 ScafM SNP 0046.scaffold00167 9991 1 A G scaffold495 ScafM SNP 0046.scaffold00167 9994 1 A C scaffold495 ScafM SNP 0046.scaffold00167 10005 1 C A scaffold495 ScafM SNP 0046.scaffold00167 10043 1 T C scaffold495 ScafM SNP 0046.scaffold00167 10068 1 A C scaffold495 ScafM SNP 0046.scaffold00167 10105 1 A C scaffold495 ScafM SNP 0046.scaffold00167 10138 1 T A scaffold495 ScafM SNP 0046.scaffold00167 10204 1 C A scaffold495 ScafM SNP 0046.scaffold00167 10228 1 T G scaffold495 ScafM SNP 0046.scaffold00167 10230 1 C A scaffold495 ScafM SNP 0046.scaffold00167 10239 1 T C scaffold495 ScafM SNP 0046.scaffold00167 10251 1 C T scaffold495 ScafM SNP 0046.scaffold00167 10275 1 T G scaffold495 ScafM SNP 0046.scaffold00167 10295 1 G A scaffold495 ScafM SNP 0046.scaffold00167 10357 2 GA TC scaffold495 ScafM SNP 0046.scaffold00167 10368 1 C A scaffold495 ScafM SNP 0046.scaffold00167 10956 1 A G scaffold495 ScafM INDEL 0046.scaffold00167 10967 2 AT .. scaffold495 ScafM SNP 0046.scaffold00167 10985 1 T A scaffold495 ScafM SNP 0046.scaffold00167 10997 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11012 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11037 1 T G scaffold495 ScafM SNP 0046.scaffold00167 11041 1 C G scaffold495 ScafM INDEL 0046.scaffold00167 11058 2 TA .. scaffold495 ScafM SNP 0046.scaffold00167 11077 1 G A scaffold495 ScafM SNP 0046.scaffold00167 11112 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11156 1 G A scaffold495 ScafM SNP 0046.scaffold00167 11184 1 G C scaffold495 ScafM SNP 0046.scaffold00167 11196 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11206 1 G T scaffold495 ScafM SNP 0046.scaffold00167 11223 1 G C scaffold495 ScafM SNP 0046.scaffold00167 11248 3 AAG CTA scaffold495 ScafM SNP 0046.scaffold00167 11273 1 T C scaffold495 ScafM INDEL 0046.scaffold00167 11299 1 T . scaffold495 ScafM SNP 0046.scaffold00167 11304 1 G T scaffold495 ScafM SNP 0046.scaffold00167 11316 1 T C scaffold495 ScafM SNP 0046.scaffold00167 11368 1 C T scaffold495 ScafM SNP 0046.scaffold00167 11444 1 T C scaffold495 ScafM SNP 0046.scaffold00167 11486 1 G A scaffold495 ScafM SNP 0046.scaffold00167 11584 1 T C scaffold495 ScafM SNP 0046.scaffold00167 11614 1 G A scaffold495 ScafM SNP 0046.scaffold00167 11618 1 T C scaffold495 ScafM SNP 0046.scaffold00167 11620 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11623 1 G T scaffold495 ScafM SNP 0046.scaffold00167 11680 1 A C scaffold495 ScafM SNP 0046.scaffold00167 11710 1 A G scaffold495 ScafM SNP 0046.scaffold00167 11718 1 T C scaffold495 ScafM INDEL 0046.scaffold00167 11736 2 .. GG scaffold495 ScafM SNP 0046.scaffold00167 14854 1 C T scaffold495 ScafM SNP 0046.scaffold00167 14868 2 AT GC scaffold495 ScafM SNP 0046.scaffold00167 14883 1 C A scaffold495 ScafM SNP 0046.scaffold00167 14951 1 A G scaffold495 ScafM SNP 0046.scaffold00167 14982 1 A C scaffold495 ScafM SNP 0046.scaffold00167 15107 1 C A scaffold495 ScafM SNP 0046.scaffold00167 15114 1 T C scaffold495 ScafM SNP 0046.scaffold00167 15116 1 T C scaffold495 ScafM SNP 0046.scaffold00167 15133 1 G A scaffold495 ScafM SNP 0046.scaffold00167 15152 1 T G scaffold495 ScafM SNP 0046.scaffold00167 15172 1 G A scaffold495 ScafM SNP 0046.scaffold00167 15204 1 C T scaffold495 ScafM SNP 0046.scaffold00167 15235 1 G C scaffold495 ScafM SNP 0046.scaffold00167 15258 1 C T scaffold495 ScafM SNP 0046.scaffold00167 15283 1 G T scaffold495 ScafM SNP 0046.scaffold00167 15292 1 A G scaffold495 ScafM SNP 0046.scaffold00167 15295 1 A G scaffold495 ScafM SNP 0046.scaffold00167 15317 1 G C scaffold495 ScafM SNP 0046.scaffold00167 15322 1 G A scaffold495 ReadM SNP 0046.scaffold00167 16497 1 T C - ReadM SNP 0046.scaffold00167 16541 1 A T - ReadM SNP 0046.scaffold00167 16610 1 G A - ReadM SNP 0046.scaffold00167 16662 1 A C - ReadM SNP 0046.scaffold00167 16745 1 C G - ReadM INDEL 0046.scaffold00167 16751 1 . A - ScafM SNP 0046.scaffold00167 18167 1 A G scaffold495 ScafM SNP 0046.scaffold00167 18172 2 TT AC scaffold495 ScafM SNP 0046.scaffold00167 18230 1 G A scaffold495 ScafM SNP 0046.scaffold00167 18254 1 C T scaffold495 ScafM SNP 0046.scaffold00167 18258 1 T C scaffold495 ScafM SNP 0046.scaffold00167 18278 1 T C scaffold495 ScafM SNP 0046.scaffold00167 18305 1 C A scaffold495 ScafM SNP 0046.scaffold00167 18332 1 C T scaffold495 ScafM SNP 0046.scaffold00167 18343 1 A G scaffold495 ScafM INDEL 0046.scaffold00167 18386 1 . A scaffold495 ScafM SNP 0046.scaffold00167 18399 1 G A scaffold495 ScafM SNP 0046.scaffold00167 18416 1 G A scaffold495 ScafM SNP 0046.scaffold00167 18442 1 C T scaffold495 ScafM INDEL 0046.scaffold00167 18836 5 ..... CCCCC scaffold495 Both SNP 0046.scaffold00167 18965 1 A C scaffold495 ScafM SNP 0046.scaffold00167 19624 1 G A scaffold495 ScafM INDEL 0046.scaffold00167 19715 1 . A scaffold495 ScafM SNP 0046.scaffold00167 19720 2 CT AG scaffold495 ScafM SNP 0046.scaffold00167 19742 1 A G scaffold495 ReadM INDEL 0046.scaffold00167 19822 1 T . - ScafM INDEL 0046.scaffold00167 19822 2 TT .C scaffold495 ScafM INDEL 0046.scaffold00167 19908 23 TAGAGTCATAGGGTTGTAGTTCT ....................... scaffold495 ScafM SNP 0046.scaffold00167 20268 1 T C scaffold495 ScafM SNP 0046.scaffold00167 20271 1 C A scaffold495 ScafM INDEL 0046.scaffold00167 20480 1 T . scaffold495 ScafM SNP 0046.scaffold00167 20494 1 C G scaffold495 ScafM SNP 0046.scaffold00167 20499 1 A G scaffold495 ScafM SNP 0046.scaffold00167 20527 1 G T scaffold495 ScafM SNP 0046.scaffold00167 20536 1 G A scaffold495 ReadM INDEL 0046.scaffold00167 20933 3 ... ATT - Both SNP 0046.scaffold00167 21183 1 T C scaffold495 Both SNP 0046.scaffold00167 21344 1 T A scaffold495 ScafM SNP 0046.scaffold00167 21485 1 C A scaffold495 ScafM INDEL 0046.scaffold00167 21499 3 ... TTG scaffold495 ScafM SNP 0046.scaffold00167 21511 1 A C scaffold495 Both SNP 0046.scaffold00167 21612 1 C T scaffold495 ScafM SNP 0046.scaffold00167 21630 1 G A scaffold495 ScafM SNP 0046.scaffold00167 21635 1 G A scaffold495 ScafM SNP 0046.scaffold00167 21641 1 C A scaffold495 ScafM SNP 0046.scaffold00167 21664 1 C G scaffold495 ScafM SNP 0046.scaffold00167 21680 3 TTT AAA scaffold495 ScafM INDEL 0046.scaffold00167 21686 5 ..... GGTTT scaffold495 ScafM INDEL 0046.scaffold00167 21688 2 .. CG scaffold495 ScafM SNP 0046.scaffold00167 21692 1 T A scaffold495 ScafM SNP 0046.scaffold00167 21714 1 C A scaffold495 ScafM SNP 0046.scaffold00167 21721 2 AC GG scaffold495 ScafM SNP 0046.scaffold00167 21726 1 G C scaffold495 ScafM SNP 0046.scaffold00167 21749 1 C A scaffold495 Both INDEL 0046.scaffold00167 21788 1 . A scaffold495 Both SNP 0046.scaffold00167 21867 1 T G scaffold495 ReadM INDEL 0046.scaffold00167 21988 3 CAT ... - ReadM SNP 0046.scaffold00167 22084 1 C T - Both SNP 0046.scaffold00167 22180 1 C T scaffold495 Both SNP 0046.scaffold00167 22309 1 C A scaffold495 Both SNP 0046.scaffold00167 22325 1 T C scaffold495 Both SNP 0046.scaffold00167 22364 1 A G scaffold495 ScafM SNP 0046.scaffold00167 22385 1 A G scaffold495 ScafM SNP 0046.scaffold00167 22416 1 C G scaffold495 ScafM SNP 0046.scaffold00167 22421 1 T C scaffold495 ScafM SNP 0046.scaffold00167 22487 1 A G scaffold495 ScafM INDEL 0046.scaffold00167 22702 6 ...... TCAAGT scaffold495 ScafM INDEL 0046.scaffold00167 22703 1 . G scaffold495 ScafM SNP 0046.scaffold00167 22776 1 C A scaffold495 ScafM INDEL 0046.scaffold00167 22799 4 .... TATC scaffold495 ScafM INDEL 0046.scaffold00167 22800 2 .. TT scaffold495 ScafM SNP 0046.scaffold00167 22802 1 C T scaffold495 ScafM SNP 0046.scaffold00167 22835 1 C T scaffold495 ScafM SNP 0046.scaffold00167 22847 1 C T scaffold495 ScafM SNP 0046.scaffold00167 22866 1 A C scaffold495 ScafM SNP 0046.scaffold00167 22882 1 A C scaffold495 ScafM INDEL 0046.scaffold00167 22889 4 ACGC .... scaffold495 ScafM SNP 0046.scaffold00167 22976 1 A T scaffold495 ScafM SNP 0046.scaffold00167 23010 1 C A scaffold495 ScafM SNP 0046.scaffold00167 23040 1 A C scaffold495 ScafM INDEL 0046.scaffold00167 23046 2 TA .. scaffold495 ScafM INDEL 0046.scaffold00167 23063 4 .... ATAT scaffold495 ScafM SNP 0046.scaffold00167 23084 1 G A scaffold495 ScafM SNP 0046.scaffold00167 23108 1 G A scaffold495 ScafM SNP 0046.scaffold00167 24081 1 G C scaffold495 ScafM INDEL 0046.scaffold00167 24121 8 ........ ATATGATA scaffold495 ScafM SNP 0046.scaffold00167 24219 1 G A scaffold495 ScafM INDEL 0046.scaffold00167 24261 15 ............... CTCCATCACACGACA scaffold495 ScafM SNP 0046.scaffold00167 24347 1 T C scaffold495 ScafM INDEL 0046.scaffold00167 24389 1 . A scaffold495 ScafM SNP 0046.scaffold00167 25044 1 C A scaffold495 ScafM SNP 0046.scaffold00167 25147 1 G C scaffold495 ScafM INDEL 0046.scaffold00167 25192 1 A . scaffold495 ScafM SNP 0046.scaffold00167 25235 1 T C scaffold495 ScafM INDEL 0046.scaffold00167 25299 1 . A scaffold495 ReadM SNP 0046.scaffold00167 25912 1 G A - ScafM INDEL 0046.scaffold00167 30994 1 T . scaffold9129 Both SNP 0046.scaffold00167 31067 1 C T scaffold9129 ScafM SNP 0046.scaffold00167 31597 1 G A scaffold495 ScafM SNP 0046.scaffold00167 31726 1 A G scaffold495 ScafM SNP 0046.scaffold00167 32378 2 AA GC scaffold495 Both SNP 0046.scaffold00167 32457 1 G A scaffold495 Both SNP 0046.scaffold00167 32480 1 G C scaffold495 Both SNP 0046.scaffold00167 32517 1 G T scaffold495 ReadM INDEL 0046.scaffold00167 32619 1 T . - ReadM SNP 0046.scaffold00167 33191 1 G A - ReadM SNP 0046.scaffold00167 33621 1 T G - Both SNP 0046.scaffold00167 33663 1 C A scaffold495 ScafM SNP 0046.scaffold00167 33825 1 T A scaffold495 ScafM SNP 0046.scaffold00167 34449 1 C A scaffold351 ScafM SNP 0046.scaffold00167 34506 1 T C scaffold351 Both SNP 0046.scaffold00167 34815 1 T C scaffold351 ScafM INDEL 0046.scaffold00167 34888 6 ...... TTGTTT scaffold351 ScafM INDEL 0046.scaffold00167 34890 1 . T scaffold351 Both SNP 0046.scaffold00167 35043 1 C T scaffold351 Both SNP 0046.scaffold00167 35045 1 G A scaffold351 ScafM INDEL 0046.scaffold00167 35086 6 TGGATG ...... scaffold351 Both SNP 0046.scaffold00167 35107 1 T G scaffold351 Both SNP 0046.scaffold00167 35230 1 C A scaffold351 Both SNP 0046.scaffold00167 35241 1 A G scaffold351 Both SNP 0046.scaffold00167 35285 1 A G scaffold351 Both SNP 0046.scaffold00167 35344 1 A T scaffold351 ScafM SNP 0046.scaffold00167 35369 1 T A scaffold351 ScafM SNP 0046.scaffold00167 35374 1 C G scaffold351 ScafM SNP 0046.scaffold00167 35419 1 C G scaffold351 ScafM SNP 0046.scaffold00167 35425 1 T C scaffold351 ScafM SNP 0046.scaffold00167 35432 1 G A scaffold351 ScafM SNP 0046.scaffold00167 35447 1 A T scaffold351 Both SNP 0046.scaffold00167 35476 1 G A scaffold351 ScafM SNP 0046.scaffold00167 35494 2 CT GC scaffold351 ScafM SNP 0046.scaffold00167 35591 2 TG AT scaffold351 ScafM SNP 0046.scaffold00167 35598 1 G A scaffold351 ScafM SNP 0046.scaffold00167 35617 1 T C scaffold351 Both SNP 0046.scaffold00167 36037 1 A G scaffold351 Both SNP 0046.scaffold00167 36080 1 T C scaffold351 Both SNP 0046.scaffold00167 36196 1 T A scaffold351 Both SNP 0046.scaffold00167 36373 1 C T scaffold351 ScafM SNP 0046.scaffold00167 36515 1 T G scaffold351 Both SNP 0046.scaffold00167 36841 1 C A scaffold351 Both SNP 0046.scaffold00167 37058 1 T C scaffold351 Both SNP 0046.scaffold00167 37121 1 C G scaffold351 Both SNP 0046.scaffold00167 37136 1 C A scaffold351 Both SNP 0046.scaffold00167 37529 1 T A scaffold351 Both SNP 0046.scaffold00167 37596 1 A C scaffold351 Both SNP 0046.scaffold00167 37822 1 A G scaffold351 Both INDEL 0046.scaffold00167 37838 1 . A scaffold351 ScafM INDEL 0046.scaffold00167 37897 4 .... AACA scaffold351 ScafM SNP 0046.scaffold00167 37899 1 G A scaffold351 ScafM INDEL 0046.scaffold00167 37914 6 TTTAAT .....G scaffold351 ScafM SNP 0046.scaffold00167 37927 1 A C scaffold351 ScafM SNP 0046.scaffold00167 38053 2 AT GC scaffold351 ScafM SNP 0046.scaffold00167 38234 1 A T scaffold351 Both SNP 0046.scaffold00167 38336 1 C A scaffold351 ScafM SNP 0046.scaffold00167 38364 1 A C scaffold351 ScafM INDEL 0046.scaffold00167 38394 7 ATTGCGT ....... scaffold351 Both SNP 0046.scaffold00167 38500 1 A C scaffold351 ReadM SNP 0046.scaffold00167 38734 1 T C - ReadM SNP 0046.scaffold00167 38899 1 A G - ReadM SNP 0046.scaffold00167 39137 1 T C - Both SNP 0046.scaffold00167 39324 1 G A scaffold351 Both SNP 0046.scaffold00167 39353 1 T C scaffold351 Both SNP 0046.scaffold00167 39379 1 A G scaffold351 ScafM SNP 0046.scaffold00167 40355 1 A C scaffold351 ScafM INDEL 0046.scaffold00167 40376 1 T . scaffold351 Both SNP 0046.scaffold00167 40423 1 G A scaffold351 Both SNP 0046.scaffold00167 40496 1 C A scaffold351 Both SNP 0046.scaffold00167 40747 1 T G scaffold351 ScafM INDEL 0046.scaffold00167 40792 6 ...... CACACA scaffold351 Both SNP 0046.scaffold00167 40854 1 A G scaffold351 Both SNP 0046.scaffold00167 40866 1 A T scaffold351 Both SNP 0046.scaffold00167 40955 1 C T scaffold351 Both SNP 0046.scaffold00167 40991 1 A G scaffold351 Both SNP 0046.scaffold00167 41050 1 A G scaffold351 Both INDEL 0046.scaffold00167 41071 1 T . scaffold351 ScafM INDEL 0046.scaffold00167 41236 1 . A scaffold351 Both SNP 0046.scaffold00167 41355 1 C G scaffold351 ScafM INDEL 0046.scaffold00167 41395 6 GGGGCC .....A scaffold351 ScafM SNP 0046.scaffold00167 41408 1 C G scaffold351 Both SNP 0046.scaffold00167 41508 1 C T scaffold351 Both SNP 0046.scaffold00167 41520 1 G T scaffold351 Both SNP 0046.scaffold00167 41576 1 G A scaffold351 Both SNP 0046.scaffold00167 41864 1 A T scaffold351 Both SNP 0046.scaffold00167 42121 1 T A scaffold351 Both SNP 0046.scaffold00167 42295 1 C T scaffold351 Both SNP 0046.scaffold00167 42378 1 A G scaffold351 Both SNP 0046.scaffold00167 42389 1 C G scaffold351 Both SNP 0046.scaffold00167 42439 1 C T scaffold351 Both SNP 0046.scaffold00167 42636 1 C A scaffold351 Both SNP 0046.scaffold00167 42773 1 A G scaffold351 Both SNP 0046.scaffold00167 42776 1 C T scaffold351 Both INDEL 0046.scaffold00167 42818 1 . A scaffold351 Both INDEL 0046.scaffold00167 43071 1 . G scaffold351 ReadM SNP 0046.scaffold00167 43196 1 G A - ReadM SNP 0046.scaffold00167 43269 1 A C - Both SNP 0046.scaffold00167 43733 1 T C scaffold351 Both SNP 0046.scaffold00167 43738 1 T C scaffold351 Both SNP 0046.scaffold00167 43786 1 C T scaffold351 Both SNP 0046.scaffold00167 43935 1 T C scaffold351 Both SNP 0046.scaffold00167 43941 1 T A scaffold351 ScafM SNP 0046.scaffold00167 43966 1 A G scaffold351 ScafM SNP 0046.scaffold00167 43992 1 T A scaffold351 ScafM SNP 0046.scaffold00167 44048 1 C T scaffold351 ScafM SNP 0046.scaffold00167 44079 1 T A scaffold351 ReadM SNP 0046.scaffold00167 44696 1 G C - ReadM SNP 0046.scaffold00167 44707 1 C G - ReadM SNP 0046.scaffold00167 44725 1 A C - Both INDEL 0046.scaffold00167 44916 1 T . scaffold351 ReadM SNP 0046.scaffold00167 44993 1 A T - ReadM INDEL 0046.scaffold00167 45046 1 A . - ReadM SNP 0046.scaffold00167 45099 1 T A - ReadM SNP 0046.scaffold00167 45141 1 A T - ScafM SNP 0046.scaffold00167 46484 1 A C scaffold2642 ScafM SNP 0046.scaffold00167 46500 1 C T scaffold2642 ScafM SNP 0046.scaffold00167 46519 1 A T scaffold2642 ScafM SNP 0046.scaffold00167 46552 1 A C scaffold2642 ScafM SNP 0046.scaffold00167 46554 1 T A scaffold2642 ReadM SNP 0047.scaffold00169 516 1 G A - ReadM SNP 0047.scaffold00169 1223 1 G T - ReadM SNP 0047.scaffold00169 1258 1 T A - ReadM SNP 0047.scaffold00169 1315 1 T C - ReadM SNP 0047.scaffold00169 1336 1 G A - ReadM SNP 0047.scaffold00169 1389 1 G T - ReadM SNP 0047.scaffold00169 1461 1 C A - ReadM SNP 0047.scaffold00169 1719 1 G C - ReadM SNP 0047.scaffold00169 1729 1 G A - ReadM SNP 0047.scaffold00169 4231 1 A C - ReadM INDEL 0047.scaffold00169 4236 1 T . - ReadM SNP 0047.scaffold00169 4382 1 C T - ReadM SNP 0047.scaffold00169 4531 1 A C - ReadM SNP 0047.scaffold00169 4706 1 C T - ReadM SNP 0047.scaffold00169 4725 1 A G - ReadM SNP 0047.scaffold00169 4801 1 C T - Both SNP 0047.scaffold00169 5078 1 T C scaffold2984 ReadM SNP 0047.scaffold00169 5427 1 C A - ReadM SNP 0047.scaffold00169 5460 1 T C - ReadM SNP 0047.scaffold00169 5531 1 C A - ReadM SNP 0047.scaffold00169 6681 1 T C - ScafM SNP 0047.scaffold00169 7943 1 A T scaffold2984 Both SNP 0047.scaffold00169 8008 1 T A scaffold2984 Both SNP 0047.scaffold00169 8634 1 G A scaffold2984 ScafM SNP 0047.scaffold00169 8822 1 A T scaffold2984 Both SNP 0047.scaffold00169 8847 1 G A scaffold2984 Both SNP 0047.scaffold00169 8851 1 A G scaffold2984 ScafM INDEL 0047.scaffold00169 9269 7 AAAACAA ....... scaffold2984 Both SNP 0047.scaffold00169 9458 1 G A scaffold2984 Both SNP 0047.scaffold00169 9645 1 A G scaffold2984 Both SNP 0047.scaffold00169 9761 1 C G scaffold2984 Both INDEL 0047.scaffold00169 9910 1 T . scaffold2984 Both SNP 0047.scaffold00169 10834 1 G A scaffold2984 Both SNP 0047.scaffold00169 10914 1 G T scaffold2984 Both SNP 0047.scaffold00169 10993 1 C T scaffold2984 Both SNP 0047.scaffold00169 11449 1 G A scaffold2984 ScafM SNP 0047.scaffold00169 11566 1 G A scaffold2984 ReadM SNP 0047.scaffold00169 11748 1 A C - ReadM SNP 0047.scaffold00169 11763 1 C A - ReadM SNP 0047.scaffold00169 12013 1 G A - ReadM SNP 0047.scaffold00169 12379 1 T C - ReadM SNP 0047.scaffold00169 12628 1 G C - ReadM SNP 0047.scaffold00169 12643 1 T C - ScafM SNP 0047.scaffold00169 13905 1 T C scaffold2984 Both SNP 0047.scaffold00169 14093 1 T G scaffold2984 ScafM SNP 0047.scaffold00169 14134 1 T G scaffold2984 Both SNP 0047.scaffold00169 14212 1 C T scaffold2984 ScafM SNP 0047.scaffold00169 14318 1 T A scaffold2984 Both SNP 0047.scaffold00169 14713 1 G A scaffold2984 Both SNP 0047.scaffold00169 14855 1 C T scaffold2984 ReadM SNP 0047.scaffold00169 15941 1 A G - ReadM SNP 0047.scaffold00169 16022 1 A G - ReadM SNP 0047.scaffold00169 16273 1 A T - ReadM SNP 0047.scaffold00169 16292 1 T A - ReadM SNP 0047.scaffold00169 16618 1 T C - ReadM SNP 0047.scaffold00169 17319 1 C T - Both SNP 0047.scaffold00169 17992 1 T G scaffold2984 ReadM SNP 0047.scaffold00169 18215 1 T G - ReadM SNP 0047.scaffold00169 18543 1 G A - ReadM SNP 0047.scaffold00169 18613 1 G C - ReadM SNP 0047.scaffold00169 18815 1 A T - ReadM SNP 0047.scaffold00169 19194 1 A G - ReadM SNP 0047.scaffold00169 19338 1 T C - ReadM SNP 0047.scaffold00169 19398 1 A G - ReadM SNP 0047.scaffold00169 19550 1 G A - ReadM SNP 0047.scaffold00169 19728 1 A G - ReadM SNP 0047.scaffold00169 20224 1 A G - ReadM SNP 0047.scaffold00169 20487 1 G A - ReadM SNP 0047.scaffold00169 20490 1 T C - ReadM SNP 0047.scaffold00169 20940 1 A G - ReadM SNP 0047.scaffold00169 21130 1 A T - Both SNP 0047.scaffold00169 21431 1 A G scaffold2984 Both SNP 0047.scaffold00169 21785 1 T C scaffold2984 Both SNP 0047.scaffold00169 22466 1 G A scaffold2984 ScafM SNP 0047.scaffold00169 22759 1 C G scaffold2984 ReadM SNP 0047.scaffold00169 23145 1 A C - ReadM SNP 0047.scaffold00169 23320 1 C T - ReadM INDEL 0047.scaffold00169 23404 1 A . - ReadM SNP 0047.scaffold00169 23710 1 A T - ReadM SNP 0047.scaffold00169 23835 1 A T - Both SNP 0047.scaffold00169 23999 1 C T scaffold2984 ReadM SNP 0047.scaffold00169 24336 1 T G - ReadM SNP 0047.scaffold00169 24905 1 T C - ReadM SNP 0047.scaffold00169 25076 1 G T - ReadM SNP 0047.scaffold00169 25384 1 T A - ReadM SNP 0047.scaffold00169 25705 1 G A - ReadM SNP 0047.scaffold00169 25722 1 T C - ReadM SNP 0047.scaffold00169 25864 1 A G - ReadM SNP 0047.scaffold00169 26074 1 G T - ReadM SNP 0047.scaffold00169 26109 1 C A - ReadM SNP 0047.scaffold00169 26124 1 C G - ReadM SNP 0047.scaffold00169 26300 1 G A - ReadM SNP 0047.scaffold00169 26469 1 T G - Both SNP 0047.scaffold00169 26669 1 T C scaffold2984 Both SNP 0047.scaffold00169 27290 1 A T scaffold2984 Both SNP 0047.scaffold00169 27307 1 C T scaffold2984 Both SNP 0047.scaffold00169 27340 1 A G scaffold2984 ScafM INDEL 0047.scaffold00169 27559 4 .... TATA scaffold2984 ReadM SNP 0047.scaffold00169 27832 1 T A - ScafM SNP 0047.scaffold00169 27953 1 A C scaffold2984 Both SNP 0047.scaffold00169 27966 1 A G scaffold2984 Both SNP 0047.scaffold00169 27984 1 G A scaffold2984 ReadM SNP 0047.scaffold00169 28090 1 G T - ReadM SNP 0047.scaffold00169 29273 1 G T - ReadM SNP 0047.scaffold00169 29541 1 A T - ReadM SNP 0047.scaffold00169 29593 1 A G - ReadM SNP 0047.scaffold00169 30150 1 C A - ReadM SNP 0047.scaffold00169 30214 1 A G - ReadM SNP 0047.scaffold00169 30786 1 G A - ReadM SNP 0047.scaffold00169 31192 1 T C - ReadM SNP 0047.scaffold00169 31290 1 G A - ReadM SNP 0047.scaffold00169 31343 1 T C - ReadM SNP 0047.scaffold00169 31393 1 C T - ReadM SNP 0047.scaffold00169 31685 1 T G - ReadM SNP 0047.scaffold00169 31776 1 A G - ReadM SNP 0047.scaffold00169 46048 1 T C - ReadM SNP 0047.scaffold00169 46099 1 C G - ReadM SNP 0047.scaffold00169 46221 1 T C - ReadM SNP 0047.scaffold00169 46887 1 G C - ScafM SNP 0047.scaffold00169 47103 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 47134 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 47148 1 G T scaffold9751 ScafM SNP 0047.scaffold00169 47152 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 47181 1 A C scaffold9751 ScafM SNP 0047.scaffold00169 47196 2 GA AC scaffold9751 ReadM SNP 0047.scaffold00169 47197 1 A C - ScafM INDEL 0047.scaffold00169 47254 15 AGTCTATTTGGAGGT ............... scaffold9751 ScafM INDEL 0047.scaffold00169 47355 1 A . scaffold9751 ScafM SNP 0047.scaffold00169 47407 1 C A scaffold9751 ScafM SNP 0047.scaffold00169 47522 1 G A scaffold9751 ScafM SNP 0047.scaffold00169 47571 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 47603 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 47636 1 G C scaffold9751 ScafM SNP 0047.scaffold00169 47646 1 G T scaffold9751 ScafM SNP 0047.scaffold00169 47648 1 A C scaffold9751 ScafM SNP 0047.scaffold00169 47661 1 C T scaffold9751 ReadM SNP 0047.scaffold00169 47683 1 C T - ScafM SNP 0047.scaffold00169 47741 1 A G scaffold9751 ReadM SNP 0047.scaffold00169 47743 1 C A - ScafM SNP 0047.scaffold00169 47785 1 A C scaffold9751 ScafM SNP 0047.scaffold00169 47792 1 T G scaffold9751 ScafM SNP 0047.scaffold00169 47827 1 T A scaffold9751 ScafM SNP 0047.scaffold00169 47873 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 47904 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 48031 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 48047 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 48067 1 A G scaffold9751 Both SNP 0047.scaffold00169 48134 1 T C scaffold9751 ScafM INDEL 0047.scaffold00169 48174 3 ..G ACT scaffold9751 ScafM INDEL 0047.scaffold00169 48176 2 .. AG scaffold9751 ScafM SNP 0047.scaffold00169 48185 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 48200 1 T C scaffold9751 ScafM SNP 0047.scaffold00169 48206 1 G C scaffold9751 ReadM INDEL 0047.scaffold00169 48219 3 TTA ... - ScafM INDEL 0047.scaffold00169 48219 1 T . scaffold9751 ScafM INDEL 0047.scaffold00169 48222 2 TT .. scaffold9751 ScafM SNP 0047.scaffold00169 48278 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 48347 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 48351 2 CT GG scaffold9751 ReadM SNP 0047.scaffold00169 48352 1 T G - ScafM SNP 0047.scaffold00169 48447 1 C T scaffold9751 ScafM INDEL 0047.scaffold00169 48511 14 TCTTGCCGTCTGTT .............. scaffold9751 ScafM SNP 0047.scaffold00169 48559 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 48618 3 GCC CTT scaffold9751 ScafM SNP 0047.scaffold00169 48638 1 A G scaffold9751 ScafM SNP 0047.scaffold00169 48661 1 G T scaffold9751 ScafM SNP 0047.scaffold00169 48671 1 G A scaffold9751 ScafM SNP 0047.scaffold00169 48673 1 C T scaffold9751 ScafM SNP 0047.scaffold00169 48677 1 A G scaffold9751 ScafM INDEL 0047.scaffold00169 48682 1 . G scaffold9751 ScafM SNP 0047.scaffold00169 48712 2 CT TC scaffold9751 ScafM INDEL 0047.scaffold00169 48807 24 ........................ ATTCTAATCTTACTTCACCTTTAT scaffold9751 ScafM SNP 0047.scaffold00169 48824 1 T C scaffold9751 ScafM SNP 0047.scaffold00169 48997 1 G A scaffold9751 ScafM SNP 0047.scaffold00169 49039 1 G A scaffold9751 ScafM SNP 0047.scaffold00169 49050 1 T C scaffold9751 ScafM SNP 0047.scaffold00169 49063 1 G A scaffold9751 ScafM INDEL 0047.scaffold00169 49105 1 . A scaffold9751 ScafM SNP 0047.scaffold00169 49114 1 T A scaffold9751 Both SNP 0047.scaffold00169 49421 1 T C scaffold11730 ReadM SNP 0047.scaffold00169 49551 1 A G - ReadM SNP 0047.scaffold00169 49553 1 A G - ReadM SNP 0047.scaffold00169 50472 1 T G - ReadM SNP 0047.scaffold00169 50513 1 T C - ReadM SNP 0047.scaffold00169 50614 1 C A - ReadM SNP 0047.scaffold00169 50762 1 T C - ReadM SNP 0047.scaffold00169 50768 1 T C - ReadM SNP 0047.scaffold00169 51114 1 G C - ReadM SNP 0047.scaffold00169 51926 1 T G - ReadM SNP 0047.scaffold00169 52098 1 G A - ReadM SNP 0047.scaffold00169 52142 1 C G - ReadM SNP 0047.scaffold00169 52480 1 T G - ReadM SNP 0047.scaffold00169 52997 1 A G - ReadM SNP 0047.scaffold00169 53013 1 T C - ReadM SNP 0047.scaffold00169 53109 1 T C - ReadM SNP 0047.scaffold00169 53525 1 A G - ReadM SNP 0047.scaffold00169 53611 1 C A - ReadM SNP 0047.scaffold00169 54006 1 G A - Both SNP 0047.scaffold00169 54426 1 G T scaffold11730 ReadM SNP 0047.scaffold00169 55087 1 G T - ReadM SNP 0047.scaffold00169 55347 1 T G - ReadM SNP 0047.scaffold00169 55589 1 T G - ReadM SNP 0047.scaffold00169 55964 1 C T - ScafM INDEL 0047.scaffold00169 56441 17 TGGATTGGACATAAGAC ................. scaffold11730 ReadM SNP 0047.scaffold00169 56567 1 G A - ReadM SNP 0047.scaffold00169 56717 1 T C - ReadM SNP 0047.scaffold00169 58032 1 A C - ScafM SNP 0047.scaffold00169 59599 1 A C scaffold11730 ScafM SNP 0047.scaffold00169 59601 1 G A scaffold11730 Both SNP 0047.scaffold00169 59888 1 T C scaffold11730 Both SNP 0047.scaffold00169 60002 1 C G scaffold11730 Both SNP 0047.scaffold00169 60118 1 A C scaffold11730 Both SNP 0047.scaffold00169 60158 1 A C scaffold11730 ScafM INDEL 0047.scaffold00169 61188 1 T . scaffold18319 Both SNP 0047.scaffold00169 62009 1 A G scaffold18319 Both SNP 0047.scaffold00169 62011 1 A G scaffold18319 Both SNP 0047.scaffold00169 62195 1 T C scaffold18319 ScafM SNP 0047.scaffold00169 62645 1 G C scaffold18319 ScafM SNP 0047.scaffold00169 63320 1 T C scaffold18319 ScafM INDEL 0047.scaffold00169 63345 4 ACAG .... scaffold18319 ReadM SNP 0047.scaffold00169 63458 1 G T - Both SNP 0047.scaffold00169 63556 1 C A scaffold18319 ScafM SNP 0047.scaffold00169 63824 1 T A scaffold18319 Both SNP 0047.scaffold00169 63973 1 A T scaffold18319 ScafM INDEL 0047.scaffold00169 64273 2 TA .. scaffold18319 ReadM SNP 0047.scaffold00169 64935 1 T G - ReadM SNP 0047.scaffold00169 65864 1 G A - ReadM INDEL 0047.scaffold00169 66543 3 ... TAT - ReadM SNP 0047.scaffold00169 67611 1 G A - ReadM SNP 0047.scaffold00169 67984 1 G C - ReadM SNP 0047.scaffold00169 68364 1 A C - ReadM SNP 0047.scaffold00169 68774 1 C T - ReadM SNP 0047.scaffold00169 69206 1 C A - ReadM INDEL 0047.scaffold00169 69513 2 TG .. - ReadM SNP 0047.scaffold00169 69553 1 T A - ReadM SNP 0047.scaffold00169 69930 1 T A - Both SNP 0047.scaffold00169 70503 1 A G scaffold18319 Both SNP 0047.scaffold00169 70525 1 A C scaffold18319 Both SNP 0047.scaffold00169 70627 1 T C scaffold18319 Both SNP 0047.scaffold00169 70823 1 T A scaffold18319 Both SNP 0047.scaffold00169 71309 1 G A scaffold18319 Both SNP 0047.scaffold00169 71743 1 C T scaffold18319 Both SNP 0047.scaffold00169 71750 1 G T scaffold18319 ReadM SNP 0047.scaffold00169 72115 1 G C - ReadM SNP 0047.scaffold00169 72358 1 C T - ReadM SNP 0047.scaffold00169 72379 1 A G - ReadM SNP 0047.scaffold00169 72808 1 A G - ReadM SNP 0047.scaffold00169 72980 1 A T - ReadM SNP 0047.scaffold00169 73381 1 G A - ReadM SNP 0047.scaffold00169 73476 1 T A - ReadM SNP 0047.scaffold00169 73547 1 T C - ReadM SNP 0047.scaffold00169 74052 1 A G - ReadM SNP 0047.scaffold00169 74309 1 G A - ReadM SNP 0047.scaffold00169 74599 1 C T - ReadM SNP 0047.scaffold00169 74788 1 T G - ReadM SNP 0047.scaffold00169 74806 1 G A - ReadM SNP 0047.scaffold00169 74882 1 A G - ScafM INDEL 0047.scaffold00169 75024 1 A . scaffold18319 Both SNP 0047.scaffold00169 75337 1 A T scaffold18319 ReadM SNP 0047.scaffold00169 75682 1 C T - Both SNP 0047.scaffold00169 75951 1 A C scaffold18319 ReadM SNP 0047.scaffold00169 76285 1 A T - ReadM SNP 0047.scaffold00169 76336 1 C T - ReadM SNP 0047.scaffold00169 76344 1 T C - ReadM SNP 0047.scaffold00169 76453 1 T C - ReadM SNP 0047.scaffold00169 76943 1 G A - ReadM SNP 0047.scaffold00169 77117 1 T A - ReadM SNP 0047.scaffold00169 77121 1 T A - ReadM SNP 0047.scaffold00169 77252 1 A G - ReadM SNP 0047.scaffold00169 77288 1 A G - ReadM SNP 0047.scaffold00169 77402 1 C T - ReadM SNP 0047.scaffold00169 77538 1 T A - ReadM SNP 0047.scaffold00169 78615 1 G A - ReadM SNP 0047.scaffold00169 78626 1 G A - ReadM SNP 0047.scaffold00169 78687 1 T C - ReadM SNP 0047.scaffold00169 78990 1 T A - ReadM SNP 0047.scaffold00169 79681 1 G C - ReadM SNP 0047.scaffold00169 80224 1 G A - ReadM SNP 0047.scaffold00169 80394 1 C T - ReadM SNP 0047.scaffold00169 80412 1 C T - ReadM SNP 0047.scaffold00169 83821 1 G A - ReadM SNP 0047.scaffold00169 86452 1 C T - ReadM SNP 0047.scaffold00169 86968 1 C T - ReadM SNP 0047.scaffold00169 87051 1 C T - ReadM SNP 0047.scaffold00169 87416 1 C T - ReadM SNP 0047.scaffold00169 87422 1 C A - ReadM SNP 0047.scaffold00169 87854 1 C G - ReadM SNP 0047.scaffold00169 88068 1 T C - ReadM SNP 0047.scaffold00169 88208 1 G T - ScafM INDEL 0047.scaffold00169 88479 3 ... TTT scaffold514 Both SNP 0047.scaffold00169 89045 1 T A scaffold514 Both SNP 0047.scaffold00169 89609 1 T G scaffold514 ReadM SNP 0047.scaffold00169 91007 1 G T - ReadM SNP 0047.scaffold00169 91274 1 A G - ReadM SNP 0047.scaffold00169 91311 1 G T - ReadM SNP 0047.scaffold00169 91866 1 G A - ReadM SNP 0047.scaffold00169 92023 1 G C - ReadM SNP 0047.scaffold00169 92317 1 G A - ReadM SNP 0047.scaffold00169 92577 1 C T - ReadM SNP 0047.scaffold00169 93006 1 T C - Both SNP 0047.scaffold00169 93678 1 G T scaffold514 Both SNP 0047.scaffold00169 93795 1 A G scaffold514 Both SNP 0047.scaffold00169 93833 1 G A scaffold514 ReadM SNP 0047.scaffold00169 95605 1 T G - ReadM SNP 0047.scaffold00169 95677 1 T A - ReadM SNP 0047.scaffold00169 95714 1 T A - ReadM SNP 0047.scaffold00169 95763 1 G A - ScafM SNP 0047.scaffold00169 96218 1 A G scaffold514 ScafM SNP 0047.scaffold00169 96597 1 T C scaffold514 ReadM SNP 0047.scaffold00169 96811 1 T C - ScafM SNP 0047.scaffold00169 96946 1 T C scaffold514 ScafM SNP 0047.scaffold00169 96949 1 G A scaffold514 Both SNP 0047.scaffold00169 97354 1 T G scaffold514 ReadM SNP 0047.scaffold00169 97803 1 G A - ReadM SNP 0047.scaffold00169 97849 1 G A - ReadM SNP 0047.scaffold00169 97932 1 G A - ReadM SNP 0047.scaffold00169 98057 1 C T - Both SNP 0047.scaffold00169 101064 1 G A scaffold514 Both SNP 0047.scaffold00169 101289 1 T C scaffold514 ScafM SNP 0047.scaffold00169 102949 1 T C scaffold514 ScafM SNP 0047.scaffold00169 103171 1 A G scaffold514 Both INDEL 0047.scaffold00169 103984 1 T . scaffold514 ReadM SNP 0047.scaffold00169 104521 1 T C - ReadM SNP 0047.scaffold00169 104562 1 A T - ReadM SNP 0047.scaffold00169 104935 1 G A - Both SNP 0047.scaffold00169 105320 1 C T scaffold514 Both SNP 0047.scaffold00169 105334 1 T C scaffold514 ReadM SNP 0047.scaffold00169 105415 1 G A - ReadM SNP 0047.scaffold00169 105751 1 C T - ReadM SNP 0047.scaffold00169 105756 1 T A - ReadM SNP 0047.scaffold00169 105822 1 C T - ReadM SNP 0047.scaffold00169 106911 1 G C - ReadM SNP 0047.scaffold00169 107863 1 G C - ReadM SNP 0047.scaffold00169 108211 1 C A - ReadM INDEL 0047.scaffold00169 108260 1 . C - ReadM SNP 0047.scaffold00169 108341 1 A G - ReadM SNP 0047.scaffold00169 108617 1 C T - ReadM SNP 0047.scaffold00169 108797 1 T A - ReadM SNP 0047.scaffold00169 109400 1 C T - ReadM SNP 0047.scaffold00169 109418 1 A C - ReadM SNP 0047.scaffold00169 109445 1 A G - ReadM SNP 0047.scaffold00169 109455 1 C T - ReadM SNP 0047.scaffold00169 109602 1 G A - ReadM SNP 0047.scaffold00169 109973 1 G A - ReadM SNP 0047.scaffold00169 110949 1 C A - ReadM SNP 0047.scaffold00169 111052 1 A T - ReadM SNP 0047.scaffold00169 111344 1 T A - ReadM SNP 0047.scaffold00169 111463 1 C G - ReadM SNP 0047.scaffold00169 111583 1 A G - ScafM SNP 0047.scaffold00169 112047 1 C A scaffold514 ReadM SNP 0047.scaffold00169 113035 1 C A - ReadM SNP 0047.scaffold00169 113410 1 A T - ReadM SNP 0047.scaffold00169 114096 1 C A - ReadM SNP 0047.scaffold00169 114222 1 T A - ReadM SNP 0047.scaffold00169 114534 1 G A - ReadM SNP 0047.scaffold00169 114583 1 G T - ReadM SNP 0047.scaffold00169 114645 1 T C - ReadM SNP 0047.scaffold00169 115012 1 C T - ReadM SNP 0047.scaffold00169 116078 1 T C - ReadM SNP 0047.scaffold00169 117666 1 G A - ReadM SNP 0047.scaffold00169 118147 1 C G - ReadM SNP 0047.scaffold00169 118185 1 C G - ReadM SNP 0047.scaffold00169 118219 1 G C - ReadM SNP 0047.scaffold00169 118661 1 A C - ReadM SNP 0047.scaffold00169 119198 1 G A - ReadM SNP 0047.scaffold00169 119417 1 C T - ReadM SNP 0047.scaffold00169 119466 1 C A - ReadM SNP 0047.scaffold00169 119615 1 G T - ReadM SNP 0047.scaffold00169 119723 1 A G - ReadM SNP 0047.scaffold00169 119766 1 C G - ReadM SNP 0047.scaffold00169 119876 1 A G - ReadM SNP 0047.scaffold00169 120201 1 C T - ReadM INDEL 0047.scaffold00169 120234 1 T . - ReadM SNP 0047.scaffold00169 120363 1 C T - ReadM SNP 0047.scaffold00169 120606 1 A T - ReadM SNP 0047.scaffold00169 120872 1 A G - ReadM SNP 0047.scaffold00169 121472 1 A G - ReadM SNP 0047.scaffold00169 121496 1 G T - ReadM SNP 0047.scaffold00169 121563 1 T C - ReadM SNP 0047.scaffold00169 121581 1 A C - ReadM SNP 0047.scaffold00169 121909 1 T G - ReadM SNP 0047.scaffold00169 122008 1 A G - ReadM SNP 0047.scaffold00169 122095 1 C T - ReadM SNP 0047.scaffold00169 122649 1 G A - ReadM SNP 0047.scaffold00169 123015 1 T A - ReadM SNP 0047.scaffold00169 123468 1 A C - ReadM SNP 0047.scaffold00169 123507 1 T C - ReadM SNP 0047.scaffold00169 123644 1 G A - ReadM SNP 0047.scaffold00169 123855 1 T G - ReadM SNP 0047.scaffold00169 124206 1 C T - ReadM SNP 0047.scaffold00169 124312 1 A G - Both SNP 0047.scaffold00169 124416 1 A G scaffold514 ReadM INDEL 0047.scaffold00169 124692 1 . A - ReadM SNP 0047.scaffold00169 124952 1 T C - ReadM SNP 0047.scaffold00169 126252 1 G A - ReadM SNP 0047.scaffold00169 126587 1 G C - ReadM SNP 0047.scaffold00169 126732 1 G A - ReadM SNP 0047.scaffold00169 126842 1 A G - ReadM SNP 0047.scaffold00169 127064 1 C A - ReadM SNP 0047.scaffold00169 127108 1 G A - ReadM SNP 0047.scaffold00169 127230 1 C T - ReadM SNP 0047.scaffold00169 127278 1 T C - ReadM SNP 0047.scaffold00169 127356 1 C A - ReadM SNP 0047.scaffold00169 127399 1 T C - ReadM SNP 0047.scaffold00169 127413 1 C T - ReadM SNP 0047.scaffold00169 127627 1 T A - ReadM SNP 0047.scaffold00169 127668 1 T C - ReadM SNP 0047.scaffold00169 127748 1 C T - ReadM SNP 0047.scaffold00169 127780 1 G T - ReadM SNP 0047.scaffold00169 127794 1 A T - ReadM SNP 0047.scaffold00169 127889 1 T C - ReadM SNP 0047.scaffold00169 127958 1 G C - ReadM SNP 0047.scaffold00169 128259 1 A T - ReadM SNP 0047.scaffold00169 128583 1 T C - ReadM INDEL 0047.scaffold00169 129104 1 . C - ReadM SNP 0047.scaffold00169 131949 1 T A - ReadM SNP 0047.scaffold00169 132310 1 G C - ReadM SNP 0047.scaffold00169 132337 1 A G - ReadM SNP 0047.scaffold00169 134635 1 A G - Both SNP 0047.scaffold00169 137805 1 C A scaffold514 Both SNP 0047.scaffold00169 137815 1 T C scaffold514 Both SNP 0047.scaffold00169 138068 1 T G scaffold514 Both SNP 0047.scaffold00169 138408 1 A T scaffold514 ReadM SNP 0047.scaffold00169 138914 1 T C - ReadM SNP 0047.scaffold00169 139274 1 G A - ReadM SNP 0047.scaffold00169 139314 1 C A - ReadM SNP 0047.scaffold00169 139622 1 C T - ReadM SNP 0047.scaffold00169 140420 1 C A - ReadM SNP 0047.scaffold00169 140715 1 A G - ReadM SNP 0047.scaffold00169 140834 1 C A - ReadM SNP 0047.scaffold00169 141171 1 T A - ReadM SNP 0047.scaffold00169 141527 1 G A - ReadM INDEL 0047.scaffold00169 141826 1 . G - ReadM SNP 0047.scaffold00169 141903 1 G T - Both SNP 0047.scaffold00169 142067 1 A G scaffold514 Both SNP 0047.scaffold00169 142189 1 T C scaffold514 ReadM SNP 0047.scaffold00169 142280 1 A G - Both SNP 0047.scaffold00169 142355 1 G T scaffold514 Both SNP 0047.scaffold00169 142378 1 T C scaffold514 Both SNP 0047.scaffold00169 142523 1 T C scaffold514 Both SNP 0047.scaffold00169 142595 1 T A scaffold514 Both SNP 0047.scaffold00169 143088 1 A C scaffold514 Both SNP 0047.scaffold00169 143437 1 A G scaffold514 Both SNP 0047.scaffold00169 143501 1 A T scaffold514 ScafM SNP 0047.scaffold00169 143540 1 C T scaffold514 ScafM SNP 0047.scaffold00169 143721 1 T C scaffold514 ReadM SNP 0047.scaffold00169 144055 1 T C - ReadM SNP 0047.scaffold00169 144111 1 C A - ReadM SNP 0047.scaffold00169 144188 1 G A - ReadM SNP 0047.scaffold00169 144432 1 C A - ReadM SNP 0047.scaffold00169 144782 1 C A - ReadM SNP 0047.scaffold00169 144881 1 A T - ReadM SNP 0047.scaffold00169 144914 1 G C - ReadM SNP 0047.scaffold00169 145010 1 G T - ReadM SNP 0047.scaffold00169 145381 1 T G - ReadM SNP 0047.scaffold00169 145984 1 C T - Both SNP 0047.scaffold00169 146059 1 G A scaffold514 Both SNP 0047.scaffold00169 146164 1 G A scaffold514 Both SNP 0047.scaffold00169 146230 1 T A scaffold514 Both SNP 0047.scaffold00169 146257 1 T A scaffold514 ScafM INDEL 0047.scaffold00169 146376 9 ......... CCCATACAC scaffold514 Both SNP 0047.scaffold00169 146463 1 A T scaffold514 Both SNP 0047.scaffold00169 147024 1 A T scaffold514 Both INDEL 0047.scaffold00169 147079 2 .. CC scaffold514 Both SNP 0047.scaffold00169 147281 1 A C scaffold514 Both SNP 0047.scaffold00169 147283 1 A C scaffold514 Both SNP 0047.scaffold00169 147325 1 T C scaffold514 Both INDEL 0047.scaffold00169 147472 3 AAA ... scaffold514 ReadM SNP 0047.scaffold00169 147983 1 T C - ReadM SNP 0047.scaffold00169 148025 1 T C - ReadM SNP 0047.scaffold00169 148377 1 T C - ReadM SNP 0047.scaffold00169 148546 1 G T - ReadM SNP 0047.scaffold00169 149128 1 A G - Both SNP 0047.scaffold00169 149173 1 A G scaffold514 Both SNP 0047.scaffold00169 149182 1 C T scaffold514 Both SNP 0047.scaffold00169 149287 1 A T scaffold514 Both SNP 0047.scaffold00169 149347 1 C G scaffold514 Both SNP 0047.scaffold00169 149366 1 C T scaffold514 Both SNP 0047.scaffold00169 149485 1 G A scaffold514 ReadM SNP 0047.scaffold00169 161660 1 T C - ReadM INDEL 0047.scaffold00169 166281 1 T . - ReadM SNP 0047.scaffold00169 166401 1 C A - ReadM INDEL 0047.scaffold00169 166408 2 .. TT - ReadM SNP 0047.scaffold00169 166457 1 C A - ReadM SNP 0047.scaffold00169 166667 1 G A - ReadM SNP 0047.scaffold00169 166856 1 A G - ReadM SNP 0047.scaffold00169 166931 1 G A - ReadM SNP 0047.scaffold00169 167366 1 C G - ReadM SNP 0047.scaffold00169 167403 1 A G - ReadM SNP 0047.scaffold00169 167409 1 C T - ReadM SNP 0047.scaffold00169 167464 1 T A - ReadM SNP 0047.scaffold00169 167466 1 T C - ReadM SNP 0047.scaffold00169 167532 1 C T - ReadM SNP 0047.scaffold00169 167583 1 G A - ReadM SNP 0047.scaffold00169 167670 1 T A - ReadM SNP 0047.scaffold00169 167964 1 A C - ReadM SNP 0047.scaffold00169 168191 1 A G - ReadM SNP 0047.scaffold00169 168219 1 A G - ReadM SNP 0047.scaffold00169 168231 1 G A - ReadM SNP 0047.scaffold00169 168660 1 T A - ReadM SNP 0047.scaffold00169 168838 1 G A - ReadM SNP 0047.scaffold00169 169843 1 A G - ScafM SNP 0047.scaffold00169 170269 1 T C scaffold417 ScafM SNP 0047.scaffold00169 170321 1 G C scaffold417 ScafM SNP 0047.scaffold00169 170325 1 C T scaffold417 ScafM SNP 0047.scaffold00169 170363 1 T A scaffold417 ScafM SNP 0047.scaffold00169 170374 1 T A scaffold417 ScafM SNP 0047.scaffold00169 170390 1 G C scaffold417 ScafM SNP 0047.scaffold00169 170392 1 T C scaffold417 ScafM SNP 0047.scaffold00169 171270 1 G T scaffold5200 ScafM SNP 0047.scaffold00169 171318 1 T C scaffold5200 ReadM SNP 0047.scaffold00169 171530 1 G T - ReadM SNP 0047.scaffold00169 172083 1 T G - ReadM SNP 0047.scaffold00169 174059 1 A G - ReadM SNP 0047.scaffold00169 178241 1 A C - ReadM SNP 0047.scaffold00169 179082 1 C T - ReadM SNP 0047.scaffold00169 179469 1 A G - ReadM SNP 0047.scaffold00169 179518 1 C T - ReadM SNP 0047.scaffold00169 179747 1 T C - ReadM SNP 0047.scaffold00169 180357 1 A G - ReadM SNP 0047.scaffold00169 180404 1 T A - ReadM SNP 0047.scaffold00169 180465 1 G T - ReadM SNP 0047.scaffold00169 180511 1 T G - ReadM SNP 0047.scaffold00169 180662 1 T A - Both SNP 0047.scaffold00169 183299 1 C A scaffold10695 Both SNP 0047.scaffold00169 183303 1 G A scaffold10695 Both SNP 0047.scaffold00169 183307 1 G T scaffold10695 ReadM SNP 0047.scaffold00169 183667 1 C G - ReadM SNP 0047.scaffold00169 183735 1 A G - ReadM SNP 0047.scaffold00169 183806 1 A G - ReadM INDEL 0047.scaffold00169 188801 1 . T - ReadM SNP 0047.scaffold00169 188832 1 G A - ReadM SNP 0047.scaffold00169 189254 1 A G - ReadM SNP 0047.scaffold00169 190227 1 A C - ReadM SNP 0047.scaffold00169 190929 1 A G - ReadM SNP 0047.scaffold00169 192133 1 G T - ReadM SNP 0047.scaffold00169 192272 1 G A - ReadM SNP 0047.scaffold00169 192301 1 G A - ReadM SNP 0047.scaffold00169 192453 1 A G - ReadM SNP 0047.scaffold00169 192515 1 T C - ReadM SNP 0047.scaffold00169 192983 1 C T - ReadM SNP 0047.scaffold00169 193648 1 C T - ReadM SNP 0047.scaffold00169 194125 1 T C - ReadM SNP 0047.scaffold00169 194510 1 C T - ReadM INDEL 0047.scaffold00169 194608 2 AA .. - Both SNP 0047.scaffold00169 194942 1 C T scaffold10695 Both SNP 0047.scaffold00169 195196 1 T G scaffold10695 Both SNP 0047.scaffold00169 195363 1 C A scaffold10695 ScafM SNP 0047.scaffold00169 196026 1 T A scaffold10695 ReadM SNP 0047.scaffold00169 196227 1 T C - ReadM SNP 0047.scaffold00169 196271 1 T A - Both SNP 0047.scaffold00169 196982 1 C T scaffold10695 ReadM SNP 0047.scaffold00169 200110 1 C A - ReadM SNP 0047.scaffold00169 200234 1 A T - ReadM SNP 0047.scaffold00169 200616 1 A T - ReadM SNP 0047.scaffold00169 201001 1 T C - ReadM SNP 0047.scaffold00169 201707 1 A G - ReadM SNP 0047.scaffold00169 202065 1 T C - ReadM SNP 0047.scaffold00169 202150 1 T C - ReadM SNP 0047.scaffold00169 202780 1 G A - ReadM SNP 0047.scaffold00169 202984 1 C A - ReadM INDEL 0047.scaffold00169 203134 1 T . - ReadM SNP 0047.scaffold00169 203157 1 T G - ReadM SNP 0047.scaffold00169 203371 1 G A - ReadM SNP 0047.scaffold00169 203517 1 A C - ReadM SNP 0047.scaffold00169 203583 1 A G - ReadM SNP 0047.scaffold00169 203728 1 C T - ReadM SNP 0047.scaffold00169 203922 1 T C - ReadM SNP 0047.scaffold00169 204265 1 G A - ReadM SNP 0047.scaffold00169 204413 1 G C - ScafM SNP 0047.scaffold00169 205202 1 G A scaffold23326 ScafM SNP 0047.scaffold00169 205237 1 A T scaffold23326 ScafM SNP 0047.scaffold00169 205358 1 C T scaffold23326 Both SNP 0047.scaffold00169 205469 1 C A scaffold23326 Both SNP 0047.scaffold00169 205565 1 C T scaffold23326 ScafM SNP 0047.scaffold00169 205632 1 T C scaffold23326 Both SNP 0047.scaffold00169 205647 1 C T scaffold23326 ScafM SNP 0047.scaffold00169 205691 1 T G scaffold23326 Both SNP 0047.scaffold00169 205846 1 A T scaffold23326 ReadM SNP 0047.scaffold00169 206007 1 C T - ReadM SNP 0047.scaffold00169 206016 1 C T - ReadM SNP 0047.scaffold00169 206254 1 A T - ReadM SNP 0047.scaffold00169 206383 1 T A - ReadM SNP 0047.scaffold00169 206503 1 A G - ReadM INDEL 0047.scaffold00169 206590 1 . C - ReadM SNP 0047.scaffold00169 206816 1 G A - Both SNP 0047.scaffold00169 207035 1 A G scaffold23326 Both SNP 0047.scaffold00169 207163 1 T C scaffold23326 Both SNP 0047.scaffold00169 207481 1 T C scaffold23326 Both SNP 0047.scaffold00169 207531 1 G A scaffold23326 Both SNP 0047.scaffold00169 207716 1 A G scaffold23326 ReadM SNP 0047.scaffold00169 207848 1 T C - Both INDEL 0047.scaffold00169 208060 1 . T scaffold23326 ReadM INDEL 0047.scaffold00169 208347 1 C . - ReadM SNP 0047.scaffold00169 210477 1 A G - ReadM SNP 0047.scaffold00169 210591 1 A C - Both SNP 0047.scaffold00169 210669 1 T C scaffold23326 Both SNP 0047.scaffold00169 210675 1 T C scaffold23326 Both SNP 0047.scaffold00169 210697 1 T C scaffold23326 Both SNP 0047.scaffold00169 211209 1 A C scaffold23326 ReadM SNP 0047.scaffold00169 211774 1 T C - ScafM SNP 0047.scaffold00169 212513 1 T G scaffold23326 ScafM SNP 0047.scaffold00169 212521 1 C T scaffold23326 ScafM SNP 0047.scaffold00169 212611 1 T C scaffold23326 ScafM INDEL 0047.scaffold00169 212973 3 GGG ... scaffold23326 ScafM SNP 0047.scaffold00169 212977 1 G A scaffold23326 Both SNP 0047.scaffold00169 213664 1 G T scaffold23326 Both SNP 0047.scaffold00169 213686 1 A G scaffold23326 Both SNP 0047.scaffold00169 213804 1 A G scaffold23326 ReadM SNP 0047.scaffold00169 213837 1 A T - ReadM SNP 0047.scaffold00169 213840 1 T C - ReadM SNP 0047.scaffold00169 213867 1 G A - Both SNP 0047.scaffold00169 214433 1 A G scaffold23326 ReadM SNP 0047.scaffold00169 215197 1 T C - ReadM SNP 0047.scaffold00169 216039 1 T A - ReadM SNP 0047.scaffold00169 216120 1 C T - ReadM SNP 0047.scaffold00169 216174 1 T G - ReadM SNP 0047.scaffold00169 216334 1 A G - ReadM SNP 0047.scaffold00169 216966 1 G T - ReadM SNP 0047.scaffold00169 216978 1 C T - ReadM SNP 0047.scaffold00169 217177 1 C A - ReadM SNP 0047.scaffold00169 217302 1 A T - ReadM SNP 0047.scaffold00169 217325 1 T C - ReadM SNP 0047.scaffold00169 217428 1 T C - ReadM SNP 0047.scaffold00169 217595 1 C T - ReadM SNP 0047.scaffold00169 218022 1 C T - ReadM SNP 0047.scaffold00169 218407 1 A G - Both SNP 0047.scaffold00169 218621 1 T C scaffold2831 Both SNP 0047.scaffold00169 219120 1 C T scaffold2831 Both SNP 0047.scaffold00169 219426 1 G A scaffold2831 Both SNP 0047.scaffold00169 219444 1 T C scaffold2831 Both SNP 0047.scaffold00169 219655 1 T G scaffold2831 ReadM SNP 0047.scaffold00169 219857 1 C T - Both SNP 0047.scaffold00169 220094 1 T C scaffold2831 Both SNP 0047.scaffold00169 220139 1 G T scaffold2831 ReadM SNP 0047.scaffold00169 220622 1 G T - ReadM SNP 0047.scaffold00169 220679 1 G A - Both SNP 0047.scaffold00169 220782 1 G A scaffold2831 Both SNP 0047.scaffold00169 220838 1 A G scaffold2831 Both SNP 0047.scaffold00169 220919 1 T G scaffold2831 Both SNP 0047.scaffold00169 221008 1 C T scaffold2831 Both SNP 0047.scaffold00169 221039 1 T G scaffold2831 ReadM SNP 0047.scaffold00169 221929 1 C T - ReadM SNP 0047.scaffold00169 222486 1 A G - ReadM SNP 0047.scaffold00169 222518 1 T C - ReadM SNP 0047.scaffold00169 222793 1 C T - ReadM SNP 0047.scaffold00169 223109 1 C T - ReadM SNP 0047.scaffold00169 223191 1 G A - ReadM SNP 0047.scaffold00169 223247 1 G A - ReadM SNP 0047.scaffold00169 223653 1 C A - ReadM SNP 0047.scaffold00169 223709 1 G A - ReadM SNP 0047.scaffold00169 223747 1 G T - ReadM SNP 0047.scaffold00169 224344 1 G A - ReadM SNP 0047.scaffold00169 224350 1 G A - ReadM SNP 0047.scaffold00169 224688 1 C A - ReadM SNP 0047.scaffold00169 224745 1 C G - ReadM SNP 0047.scaffold00169 224808 1 G A - ReadM SNP 0047.scaffold00169 224961 1 G A - ReadM SNP 0047.scaffold00169 225073 1 A G - ReadM SNP 0047.scaffold00169 225163 1 A G - ReadM SNP 0047.scaffold00169 225236 1 T C - ScafM SNP 0047.scaffold00169 225938 1 C A scaffold2831 Both SNP 0047.scaffold00169 226766 1 A C scaffold2831 Both SNP 0047.scaffold00169 226858 1 G A scaffold2831 ReadM INDEL 0047.scaffold00169 226915 2 .. AT - ReadM INDEL 0047.scaffold00169 227369 1 . A - Both INDEL 0047.scaffold00169 227718 1 . A scaffold2831 ScafM SNP 0047.scaffold00169 227990 1 A T scaffold2831 ReadM INDEL 0047.scaffold00169 228298 1 T . - Both SNP 0047.scaffold00169 228372 1 A G scaffold2831 ReadM SNP 0047.scaffold00169 228826 1 G T - ReadM SNP 0047.scaffold00169 228978 1 T A - ReadM SNP 0047.scaffold00169 229003 1 A C - ReadM SNP 0047.scaffold00169 229329 1 T C - ReadM SNP 0047.scaffold00169 229387 1 T A - ReadM SNP 0047.scaffold00169 229644 1 C T - ReadM SNP 0047.scaffold00169 229678 1 G T - ReadM SNP 0047.scaffold00169 229745 1 C A - ReadM SNP 0047.scaffold00169 230126 1 C T - ReadM SNP 0047.scaffold00169 230331 1 T C - ReadM SNP 0047.scaffold00169 230538 1 A G - ReadM SNP 0047.scaffold00169 231345 1 T C - ReadM SNP 0047.scaffold00169 231367 1 C T - ReadM SNP 0047.scaffold00169 231409 1 G A - ReadM SNP 0047.scaffold00169 231485 1 G A - ReadM SNP 0047.scaffold00169 231990 1 G A - Both SNP 0047.scaffold00169 232305 1 A C scaffold2831 ScafM INDEL 0047.scaffold00169 232412 2 AA .. scaffold2831 ReadM SNP 0047.scaffold00169 232846 1 C T - ReadM SNP 0047.scaffold00169 233200 1 T G - ReadM SNP 0047.scaffold00169 233448 1 C T - ReadM SNP 0047.scaffold00169 233459 1 C T - ReadM SNP 0047.scaffold00169 234288 1 G A - ReadM SNP 0047.scaffold00169 234452 1 T C - ReadM SNP 0047.scaffold00169 234532 1 C T - ReadM SNP 0047.scaffold00169 234811 1 A C - ReadM SNP 0047.scaffold00169 235248 1 T C - ReadM SNP 0047.scaffold00169 235670 1 C T - ReadM SNP 0047.scaffold00169 235887 1 A C - ReadM SNP 0047.scaffold00169 236680 1 A C - Both SNP 0047.scaffold00169 236720 1 C T scaffold2831 ScafM SNP 0047.scaffold00169 237113 2 TT CA scaffold2831 Both SNP 0047.scaffold00169 237216 1 T C scaffold2831 Both SNP 0047.scaffold00169 237365 1 A G scaffold2831 ReadM SNP 0047.scaffold00169 238177 1 G A - ReadM SNP 0047.scaffold00169 238305 1 C A - ReadM SNP 0047.scaffold00169 238335 1 A C - ReadM SNP 0047.scaffold00169 238459 1 A G - ReadM SNP 0047.scaffold00169 238749 1 T G - ReadM INDEL 0047.scaffold00169 238923 1 . G - ReadM SNP 0047.scaffold00169 238992 1 C T - ScafM INDEL 0047.scaffold00169 239529 1 . A scaffold2831 Both SNP 0047.scaffold00169 239661 1 C T scaffold2831 Both SNP 0047.scaffold00169 240722 1 C T scaffold2831 ScafM SNP 0047.scaffold00169 240790 1 C G scaffold2831 ScafM SNP 0047.scaffold00169 241160 1 C T scaffold2831 ScafM SNP 0047.scaffold00169 241250 1 C G scaffold2831 ReadM SNP 0047.scaffold00169 241463 1 G A - ScafM INDEL 0047.scaffold00169 241534 8 ........ ATTTACAA scaffold2831 ReadM SNP 0047.scaffold00169 241936 1 T C - ReadM INDEL 0047.scaffold00169 242038 1 T . - ReadM SNP 0047.scaffold00169 242224 1 G T - ReadM SNP 0047.scaffold00169 242250 1 G A - Both SNP 0047.scaffold00169 242359 1 A T scaffold2831 ReadM SNP 0047.scaffold00169 242697 1 T A - Both SNP 0047.scaffold00169 242957 1 G T scaffold2831 Both SNP 0047.scaffold00169 242991 1 C T scaffold2831 ScafM SNP 0047.scaffold00169 243246 1 G A scaffold2831 ScafM INDEL 0047.scaffold00169 243420 3 ... TTT scaffold2831 ReadM SNP 0047.scaffold00169 244540 1 A G - ReadM INDEL 0047.scaffold00169 244950 1 G . - ScafM INDEL 0047.scaffold00169 245051 1 A . scaffold2831 Both SNP 0047.scaffold00169 245261 1 A G scaffold2831 ScafM INDEL 0047.scaffold00169 245786 1 . G scaffold2831 Both SNP 0047.scaffold00169 245890 1 T C scaffold2831 ScafM INDEL 0047.scaffold00169 246693 8 ........ TTTTATCT scaffold2831 Both SNP 0047.scaffold00169 248506 1 G A scaffold2831 Both SNP 0047.scaffold00169 248700 1 T C scaffold2831 ReadM SNP 0047.scaffold00169 248932 1 A T - Both SNP 0047.scaffold00169 249629 1 A C scaffold2831 ReadM SNP 0047.scaffold00169 249881 1 G A - Both SNP 0047.scaffold00169 250972 1 T C scaffold2831 Both SNP 0047.scaffold00169 251040 1 G C scaffold2831 ScafM INDEL 0047.scaffold00169 251089 25 ......................... TTGCCTTTCACCTGCAGATCAACTC scaffold2831 Both INDEL 0047.scaffold00169 251186 1 . C scaffold2831 Both SNP 0047.scaffold00169 251390 1 C T scaffold2831 ScafM SNP 0047.scaffold00169 251459 1 C T scaffold2831 ScafM INDEL 0047.scaffold00169 251494 1 . T scaffold2831 ScafM SNP 0047.scaffold00169 251496 1 G T scaffold2831 Both SNP 0047.scaffold00169 252228 1 A G scaffold2831 Both SNP 0047.scaffold00169 253603 1 T C scaffold2831 Both SNP 0047.scaffold00169 254455 1 A G scaffold2831 Both SNP 0047.scaffold00169 256089 1 G A scaffold2831 ReadM SNP 0047.scaffold00169 256420 1 C T - Both INDEL 0047.scaffold00169 256703 2 GC .. scaffold2831 ScafM SNP 0047.scaffold00169 256918 1 A T scaffold2831 ScafM INDEL 0047.scaffold00169 256931 1 T . scaffold2831 ScafM SNP 0047.scaffold00169 256952 1 T A scaffold2831 ScafM SNP 0047.scaffold00169 257637 1 T C scaffold2831 Both SNP 0047.scaffold00169 258804 1 G A scaffold2831 Both SNP 0047.scaffold00169 258857 1 G C scaffold2831 Both SNP 0047.scaffold00169 259113 1 G C scaffold2831 Both SNP 0047.scaffold00169 259281 1 A T scaffold2831 Both SNP 0047.scaffold00169 259450 1 A G scaffold2831 Both SNP 0047.scaffold00169 259899 1 C A scaffold2831 Both INDEL 0047.scaffold00169 259951 3 ... GTT scaffold2831 ReadM SNP 0047.scaffold00169 263728 1 C T - ReadM SNP 0047.scaffold00169 263764 1 G A - ReadM SNP 0047.scaffold00169 264138 1 C T - ReadM SNP 0047.scaffold00169 264535 1 C T - ReadM SNP 0047.scaffold00169 264592 1 A G - ReadM SNP 0047.scaffold00169 264637 1 T C - ReadM SNP 0047.scaffold00169 265224 1 T G - ReadM SNP 0047.scaffold00169 265401 1 C T - ReadM SNP 0047.scaffold00169 268082 1 T C - ReadM SNP 0047.scaffold00169 268088 1 C T - ReadM SNP 0047.scaffold00169 268234 1 G T - ReadM SNP 0047.scaffold00169 273145 1 T C - ReadM SNP 0047.scaffold00169 273447 1 A G - ReadM SNP 0047.scaffold00169 273763 1 C T - ReadM SNP 0047.scaffold00169 274246 1 A G - ReadM SNP 0047.scaffold00169 274482 1 G C - ReadM SNP 0047.scaffold00169 274583 1 A G - ReadM SNP 0047.scaffold00169 274777 1 T C - ReadM SNP 0047.scaffold00169 274838 1 G A - ReadM SNP 0047.scaffold00169 274915 1 G A - ReadM SNP 0047.scaffold00169 275086 1 G A - ReadM SNP 0047.scaffold00169 275101 1 C T - ReadM SNP 0047.scaffold00169 275665 1 A G - ReadM SNP 0047.scaffold00169 275935 1 G A - ReadM SNP 0047.scaffold00169 276232 1 G A - ReadM SNP 0047.scaffold00169 276241 1 C G - ReadM SNP 0047.scaffold00169 276249 1 A G - ReadM SNP 0047.scaffold00169 276491 1 C G - ReadM SNP 0047.scaffold00169 276712 1 G A - Both SNP 0047.scaffold00169 276784 1 C G scaffold8093 ReadM SNP 0047.scaffold00169 277028 1 C A - ReadM SNP 0047.scaffold00169 277240 1 C A - ReadM SNP 0047.scaffold00169 277618 1 T C - ReadM SNP 0047.scaffold00169 277651 1 G A - ReadM SNP 0047.scaffold00169 277835 1 G A - Both SNP 0047.scaffold00169 277922 1 T C scaffold8093 ReadM SNP 0047.scaffold00169 278073 1 G T - ReadM SNP 0047.scaffold00169 278116 1 T A - ReadM SNP 0047.scaffold00169 278718 1 T C - ReadM SNP 0047.scaffold00169 278762 1 A T - ReadM SNP 0047.scaffold00169 278947 1 C T - ReadM SNP 0047.scaffold00169 279011 1 A G - ReadM SNP 0047.scaffold00169 279090 1 T A - ReadM SNP 0047.scaffold00169 279187 1 G A - ReadM SNP 0047.scaffold00169 279213 1 T C - ReadM SNP 0047.scaffold00169 279226 1 T C - ReadM SNP 0047.scaffold00169 279412 1 G A - ReadM SNP 0047.scaffold00169 279423 1 C T - ReadM SNP 0047.scaffold00169 279967 1 T A - ReadM SNP 0047.scaffold00169 280001 1 C A - ReadM SNP 0047.scaffold00169 280134 1 C T - ReadM SNP 0047.scaffold00169 280172 1 C A - ReadM SNP 0047.scaffold00169 280449 1 A G - ReadM SNP 0047.scaffold00169 280852 1 G T - ReadM SNP 0047.scaffold00169 281029 1 A C - ReadM SNP 0047.scaffold00169 281129 1 A C - ReadM SNP 0047.scaffold00169 281691 1 T A - ReadM SNP 0047.scaffold00169 281788 1 A T - ReadM SNP 0047.scaffold00169 282488 1 C A - ReadM SNP 0047.scaffold00169 282756 1 G A - ReadM SNP 0047.scaffold00169 282807 1 C G - ReadM SNP 0047.scaffold00169 282877 1 G C - ReadM SNP 0047.scaffold00169 283214 1 T C - ReadM SNP 0047.scaffold00169 283383 1 A C - ReadM SNP 0047.scaffold00169 283844 1 T A - ReadM SNP 0047.scaffold00169 284201 1 G A - ReadM SNP 0047.scaffold00169 284298 1 G A - ReadM SNP 0047.scaffold00169 284392 1 C T - ReadM SNP 0047.scaffold00169 284434 1 T C - ReadM SNP 0047.scaffold00169 284551 1 C T - ReadM SNP 0047.scaffold00169 284663 1 A T - ReadM SNP 0047.scaffold00169 284894 1 G T - ReadM SNP 0047.scaffold00169 285106 1 C T - ReadM SNP 0047.scaffold00169 285944 1 C G - ScafM SNP 0047.scaffold00169 286146 1 C T scaffold8093 Both SNP 0047.scaffold00169 286193 1 C T scaffold8093 Both SNP 0047.scaffold00169 286285 1 C T scaffold8093 Both SNP 0047.scaffold00169 286397 1 A C scaffold8093 ReadM SNP 0047.scaffold00169 286491 1 C T - ReadM SNP 0047.scaffold00169 286495 1 C T - ReadM SNP 0047.scaffold00169 286618 1 C A - ReadM SNP 0047.scaffold00169 286813 1 T G - ReadM SNP 0047.scaffold00169 287148 1 G C - ReadM SNP 0047.scaffold00169 287368 1 A C - ReadM SNP 0047.scaffold00169 287405 1 A G - ReadM SNP 0047.scaffold00169 287498 1 A G - ReadM SNP 0047.scaffold00169 287507 1 T A - ReadM SNP 0047.scaffold00169 287678 1 G A - ReadM SNP 0047.scaffold00169 287811 1 G A - ReadM SNP 0047.scaffold00169 287866 1 C T - ReadM SNP 0047.scaffold00169 287971 1 A G - ReadM SNP 0047.scaffold00169 288050 1 A G - ReadM SNP 0047.scaffold00169 288731 1 G A - ReadM SNP 0047.scaffold00169 288892 1 A T - ReadM SNP 0047.scaffold00169 289158 1 A T - ReadM SNP 0047.scaffold00169 289446 1 A T - ReadM SNP 0047.scaffold00169 289468 1 T G - ReadM SNP 0047.scaffold00169 289910 1 G T - ReadM SNP 0047.scaffold00169 289925 1 T C - ReadM SNP 0047.scaffold00169 289942 1 T C - ReadM SNP 0047.scaffold00169 290066 1 C T - ReadM SNP 0047.scaffold00169 290345 1 T A - ReadM SNP 0047.scaffold00169 290572 1 T A - ReadM SNP 0047.scaffold00169 290594 1 T C - ReadM SNP 0047.scaffold00169 290783 1 T G - ReadM SNP 0047.scaffold00169 290961 1 G A - Both SNP 0047.scaffold00169 291192 1 A T scaffold8093 ReadM SNP 0047.scaffold00169 291516 1 C T - ReadM SNP 0047.scaffold00169 291521 1 G C - ReadM SNP 0047.scaffold00169 291623 1 A G - ReadM SNP 0047.scaffold00169 291780 1 T C - ReadM SNP 0047.scaffold00169 291918 1 T C - ReadM SNP 0047.scaffold00169 292341 1 A G - ReadM SNP 0047.scaffold00169 292586 1 T C - ReadM SNP 0047.scaffold00169 292931 1 T G - ReadM SNP 0047.scaffold00169 292948 1 A G - ReadM SNP 0047.scaffold00169 292956 1 T C - ReadM SNP 0047.scaffold00169 293138 1 C T - ReadM SNP 0047.scaffold00169 293160 1 G T - ReadM SNP 0047.scaffold00169 293202 1 T C - Both SNP 0047.scaffold00169 293409 1 G C scaffold8093 Both SNP 0047.scaffold00169 293535 1 A G scaffold8093 Both SNP 0047.scaffold00169 293604 1 T C scaffold8093 Both SNP 0047.scaffold00169 293800 1 G T scaffold8093 ReadM SNP 0047.scaffold00169 294026 1 A G - ReadM SNP 0047.scaffold00169 294171 1 A T - Both SNP 0047.scaffold00169 295108 1 G A scaffold8093 Both SNP 0047.scaffold00169 295245 1 T G scaffold8093 Both SNP 0047.scaffold00169 295287 1 A C scaffold8093 Both SNP 0047.scaffold00169 295367 1 C A scaffold8093 ReadM SNP 0047.scaffold00169 295557 1 A G - ReadM INDEL 0047.scaffold00169 296453 1 . T - ReadM SNP 0047.scaffold00169 296471 1 T C - ReadM SNP 0047.scaffold00169 296588 1 C A - ReadM SNP 0047.scaffold00169 296695 1 C T - Both SNP 0047.scaffold00169 296930 1 A C scaffold8093 Both SNP 0047.scaffold00169 296947 1 C T scaffold8093 ReadM SNP 0047.scaffold00169 297620 1 G A - ReadM SNP 0047.scaffold00169 297676 1 C T - ReadM SNP 0047.scaffold00169 298018 1 C T - ReadM SNP 0047.scaffold00169 299418 1 A G - ReadM SNP 0047.scaffold00169 299662 1 G A - ReadM SNP 0047.scaffold00169 300005 1 A C - ReadM SNP 0047.scaffold00169 300147 1 A T - ReadM SNP 0047.scaffold00169 300326 1 A G - ReadM SNP 0047.scaffold00169 301052 1 A G - ReadM SNP 0047.scaffold00169 301394 1 G A - ReadM SNP 0047.scaffold00169 301575 1 G T - ReadM SNP 0047.scaffold00169 301839 1 A T - Both SNP 0047.scaffold00169 301926 1 C A scaffold8093 Both SNP 0047.scaffold00169 301952 1 T G scaffold8093 ReadM SNP 0047.scaffold00169 302214 1 G A - Both SNP 0047.scaffold00169 303192 1 G A scaffold8093 ReadM SNP 0047.scaffold00169 303346 1 T C - Both SNP 0047.scaffold00169 303552 1 C T scaffold8093 Both SNP 0047.scaffold00169 303776 1 C T scaffold8093 ReadM SNP 0047.scaffold00169 303987 1 C T - ReadM SNP 0047.scaffold00169 304751 1 G A - ReadM SNP 0047.scaffold00169 305036 1 C T - ReadM SNP 0047.scaffold00169 305064 1 C T - Both SNP 0047.scaffold00169 307124 1 C T scaffold12369 Both SNP 0047.scaffold00169 307394 1 C T scaffold12369 Both SNP 0047.scaffold00169 307565 1 C A scaffold12369 ReadM SNP 0047.scaffold00169 308219 1 G A - ReadM SNP 0047.scaffold00169 308752 1 C A - ReadM SNP 0047.scaffold00169 308757 1 A C - ReadM SNP 0047.scaffold00169 309385 1 T C - ReadM SNP 0047.scaffold00169 309411 1 C G - Both SNP 0047.scaffold00169 309801 1 T G scaffold12369 Both SNP 0047.scaffold00169 309850 1 C G scaffold12369 Both SNP 0047.scaffold00169 309971 1 T G scaffold12369 Both SNP 0047.scaffold00169 310284 1 A C scaffold12369 Both SNP 0047.scaffold00169 310976 1 A G scaffold12369 ReadM SNP 0047.scaffold00169 311062 1 C T - ReadM SNP 0047.scaffold00169 311176 1 A G - ReadM SNP 0047.scaffold00169 312533 1 T C - Both SNP 0047.scaffold00169 313568 1 C G scaffold12435 ReadM INDEL 0047.scaffold00169 313812 1 T . - ReadM SNP 0047.scaffold00169 313928 1 A T - ReadM SNP 0047.scaffold00169 313932 1 C T - ReadM SNP 0047.scaffold00169 313953 1 G A - ReadM SNP 0047.scaffold00169 314036 1 T C - ReadM INDEL 0047.scaffold00169 314961 1 . G - ScafM SNP 0047.scaffold00169 316671 1 C T scaffold12435 ScafM SNP 0047.scaffold00169 316697 1 A G scaffold12435 ReadM SNP 0047.scaffold00169 316961 1 A G - ReadM SNP 0047.scaffold00169 317063 1 G A - ReadM SNP 0047.scaffold00169 317105 1 G C - ReadM SNP 0047.scaffold00169 317137 1 T C - ReadM SNP 0047.scaffold00169 317316 1 G A - ReadM SNP 0047.scaffold00169 317346 1 T A - ReadM SNP 0047.scaffold00169 317378 1 C T - ScafM SNP 0047.scaffold00169 320678 1 A G scaffold12435 ScafM SNP 0047.scaffold00169 320749 1 A G scaffold12435 Both SNP 0047.scaffold00169 320980 1 T G scaffold12435 Both SNP 0047.scaffold00169 321101 1 G C scaffold12435 ScafM SNP 0047.scaffold00169 321257 1 A T scaffold12435 ScafM SNP 0047.scaffold00169 321381 1 C A scaffold12435 Both SNP 0047.scaffold00169 321498 1 A C scaffold12435 Both SNP 0047.scaffold00169 321726 1 T A scaffold12435 Both SNP 0047.scaffold00169 321883 1 A C scaffold12435 Both SNP 0047.scaffold00169 321950 1 T C scaffold12435 Both SNP 0047.scaffold00169 322031 1 A G scaffold12435 Both INDEL 0047.scaffold00169 322167 3 TTT ... scaffold12435 Both SNP 0047.scaffold00169 322231 1 G T scaffold12435 Both SNP 0047.scaffold00169 322559 1 A G scaffold12435 Both SNP 0047.scaffold00169 322732 1 T G scaffold12435 ReadM SNP 0047.scaffold00169 322993 1 C T - ReadM SNP 0047.scaffold00169 323214 1 G A - ReadM SNP 0047.scaffold00169 323849 1 T G - ReadM SNP 0047.scaffold00169 324302 1 G A - ReadM SNP 0047.scaffold00169 324447 1 C T - ReadM INDEL 0047.scaffold00169 341235 3 ... TTC - ReadM SNP 0047.scaffold00169 341297 1 C T - ReadM INDEL 0047.scaffold00169 341511 1 . T - ReadM SNP 0047.scaffold00169 341914 1 C T - ReadM SNP 0047.scaffold00169 342414 1 C G - ReadM SNP 0047.scaffold00169 342590 1 T C - ReadM SNP 0047.scaffold00169 343369 1 A G - ReadM SNP 0047.scaffold00169 343524 1 A G - ReadM SNP 0047.scaffold00169 343677 1 T A - ReadM SNP 0047.scaffold00169 343845 1 C A - ReadM SNP 0047.scaffold00169 343913 1 C T - ReadM SNP 0047.scaffold00169 343982 1 T G - ReadM SNP 0047.scaffold00169 344334 1 A C - ReadM SNP 0047.scaffold00169 344480 1 A G - ReadM SNP 0047.scaffold00169 345496 1 A G - ReadM SNP 0047.scaffold00169 345632 1 G T - ScafM SNP 0047.scaffold00169 346025 1 G A scaffold9681 ScafM SNP 0047.scaffold00169 346057 1 G C scaffold9681 Both SNP 0047.scaffold00169 346127 1 A G scaffold9681 Both SNP 0047.scaffold00169 346157 1 T C scaffold9681 ScafM INDEL 0047.scaffold00169 346278 1 . T scaffold9681 ReadM SNP 0047.scaffold00169 346612 1 A G - ReadM SNP 0047.scaffold00169 346920 1 G A - ReadM SNP 0047.scaffold00169 350121 1 A T - ReadM SNP 0047.scaffold00169 350280 1 C T - ReadM SNP 0047.scaffold00169 350492 1 C T - ReadM SNP 0047.scaffold00169 350515 1 A G - ReadM INDEL 0047.scaffold00169 350839 1 . G - ReadM SNP 0047.scaffold00169 350955 1 T G - ReadM SNP 0047.scaffold00169 351062 1 C G - ReadM SNP 0047.scaffold00169 351081 1 C T - ReadM SNP 0047.scaffold00169 351104 1 A T - ReadM SNP 0047.scaffold00169 351280 1 C T - ReadM SNP 0047.scaffold00169 351352 1 A G - ReadM SNP 0047.scaffold00169 351605 1 G A - ReadM SNP 0047.scaffold00169 351657 1 C A - ReadM SNP 0047.scaffold00169 351716 1 A G - ReadM SNP 0047.scaffold00169 351718 1 C G - ReadM SNP 0047.scaffold00169 351843 1 C T - ReadM SNP 0047.scaffold00169 352056 1 T C - ReadM SNP 0047.scaffold00169 352069 1 A C - ReadM SNP 0047.scaffold00169 352244 1 C T - ReadM SNP 0047.scaffold00169 352293 1 T A - ReadM SNP 0047.scaffold00169 352322 1 C T - ReadM SNP 0047.scaffold00169 352866 1 G T - ReadM SNP 0047.scaffold00169 352870 1 T C - ReadM SNP 0047.scaffold00169 353048 1 A C - ReadM SNP 0047.scaffold00169 353050 1 A G - ReadM SNP 0047.scaffold00169 353097 1 C T - ReadM INDEL 0047.scaffold00169 356512 1 A . - ReadM SNP 0047.scaffold00169 356547 1 T G - ReadM SNP 0047.scaffold00169 356566 1 G A - ReadM SNP 0047.scaffold00169 356636 1 G A - ReadM SNP 0047.scaffold00169 356840 1 C G - ReadM SNP 0047.scaffold00169 357009 1 G A - ReadM SNP 0047.scaffold00169 357047 1 G A - ReadM SNP 0047.scaffold00169 357177 1 A G - ReadM SNP 0047.scaffold00169 357470 1 A G - ScafM SNP 0047.scaffold00169 358121 1 A T scaffold18799 ScafM SNP 0047.scaffold00169 358129 1 C A scaffold18799 ScafM SNP 0047.scaffold00169 358131 1 A G scaffold18799 ScafM SNP 0047.scaffold00169 358161 1 C T scaffold18799 ScafM SNP 0047.scaffold00169 358185 2 TG CT scaffold18799 ScafM SNP 0047.scaffold00169 358201 1 G T scaffold18799 ScafM SNP 0047.scaffold00169 358203 1 C A scaffold18799 ScafM SNP 0047.scaffold00169 358209 1 G T scaffold18799 ScafM INDEL 0047.scaffold00169 358225 4 AAAT .... scaffold18799 ScafM SNP 0047.scaffold00169 358245 1 A C scaffold18799 ScafM SNP 0047.scaffold00169 358284 1 G A scaffold18799 ScafM SNP 0047.scaffold00169 358300 1 G A scaffold18799 ScafM SNP 0047.scaffold00169 358311 2 AG CA scaffold18799 ScafM SNP 0047.scaffold00169 358314 1 C A scaffold18799 ScafM SNP 0047.scaffold00169 358316 1 C G scaffold18799 ScafM SNP 0047.scaffold00169 358321 1 T C scaffold18799 ScafM SNP 0047.scaffold00169 358388 1 C T scaffold18799 ScafM SNP 0047.scaffold00169 358391 1 A G scaffold18799 ScafM SNP 0047.scaffold00169 358393 1 A G scaffold18799 ScafM SNP 0047.scaffold00169 358438 1 C T scaffold1143 ScafM INDEL 0047.scaffold00169 358464 1 . T scaffold1143 ScafM SNP 0047.scaffold00169 358467 1 A C scaffold1143 ScafM SNP 0047.scaffold00169 358474 3 ATT GAG scaffold1143 ScafM SNP 0047.scaffold00169 358479 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 358520 1 G C scaffold1143 ScafM INDEL 0047.scaffold00169 358533 4 .... CATT scaffold1143 ScafM SNP 0047.scaffold00169 358535 1 C A scaffold1143 ScafM INDEL 0047.scaffold00169 358556 3 ... TGT scaffold1143 ScafM INDEL 0047.scaffold00169 358558 1 . T scaffold1143 ScafM INDEL 0047.scaffold00169 358571 1 A . scaffold1143 ScafM SNP 0047.scaffold00169 358623 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 358636 1 C G scaffold1143 ScafM SNP 0047.scaffold00169 358642 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 358656 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 358658 1 A T scaffold1143 ScafM INDEL 0047.scaffold00169 358683 4 AGCC .... scaffold1143 ScafM INDEL 0047.scaffold00169 358692 4 GAAG .... scaffold1143 ScafM INDEL 0047.scaffold00169 358697 1 G . scaffold1143 ScafM SNP 0047.scaffold00169 358741 1 T C scaffold1143 ScafM SNP 0047.scaffold00169 358758 1 T C scaffold1143 ScafM SNP 0047.scaffold00169 358760 1 G T scaffold1143 ScafM SNP 0047.scaffold00169 358772 1 C A scaffold1143 ScafM SNP 0047.scaffold00169 358789 1 A G scaffold1143 ScafM INDEL 0047.scaffold00169 358801 1 T . scaffold1143 ScafM SNP 0047.scaffold00169 358803 1 T C scaffold1143 ScafM INDEL 0047.scaffold00169 358828 2 .. AA scaffold1143 ScafM SNP 0047.scaffold00169 358867 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 358879 1 A T scaffold1143 ScafM INDEL 0047.scaffold00169 358907 2 AT .. scaffold1143 ScafM SNP 0047.scaffold00169 358917 1 A G scaffold1143 ScafM INDEL 0047.scaffold00169 358922 3 AAT .TG scaffold1143 ScafM SNP 0047.scaffold00169 358942 1 A C scaffold1143 ScafM SNP 0047.scaffold00169 358945 1 G T scaffold1143 ScafM SNP 0047.scaffold00169 358947 1 G C scaffold1143 ScafM SNP 0047.scaffold00169 358960 1 A G scaffold1143 ScafM INDEL 0047.scaffold00169 358962 1 A . scaffold1143 ScafM SNP 0047.scaffold00169 358977 1 C G scaffold1143 ScafM INDEL 0047.scaffold00169 358980 5 ..... CATGT scaffold1143 ScafM SNP 0047.scaffold00169 358985 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359029 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359114 1 C A scaffold1143 ScafM SNP 0047.scaffold00169 359119 1 G T scaffold1143 ScafM SNP 0047.scaffold00169 359123 1 T A scaffold1143 ScafM SNP 0047.scaffold00169 359127 1 T C scaffold1143 ScafM SNP 0047.scaffold00169 359137 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359149 1 A T scaffold1143 ScafM SNP 0047.scaffold00169 359199 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359255 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359261 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359360 1 C G scaffold1143 ScafM SNP 0047.scaffold00169 359419 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 359434 1 T C scaffold1143 ScafM SNP 0047.scaffold00169 359438 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359535 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359559 2 AC TT scaffold1143 ScafM SNP 0047.scaffold00169 359564 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359596 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359598 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 359615 1 T G scaffold1143 ScafM INDEL 0047.scaffold00169 359623 6 ATATAT ...... scaffold1143 ScafM SNP 0047.scaffold00169 359667 1 A C scaffold1143 ScafM SNP 0047.scaffold00169 359674 1 T C scaffold1143 ScafM SNP 0047.scaffold00169 359690 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 359730 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 359763 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 359824 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 359839 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359878 1 G A scaffold1143 ScafM SNP 0047.scaffold00169 359888 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 360003 1 C T scaffold1143 ScafM SNP 0047.scaffold00169 360005 1 A G scaffold1143 ScafM SNP 0047.scaffold00169 360048 1 T C scaffold1143 ReadM SNP 0047.scaffold00169 362065 1 T A - ReadM SNP 0047.scaffold00169 362565 1 G T - ReadM SNP 0047.scaffold00169 362636 1 C G - ReadM SNP 0047.scaffold00169 362755 1 C T - ReadM SNP 0047.scaffold00169 362802 1 C A - ReadM SNP 0047.scaffold00169 363246 1 G A - ReadM SNP 0047.scaffold00169 363303 1 G A - ReadM SNP 0047.scaffold00169 363429 1 T A - ReadM SNP 0047.scaffold00169 363658 1 T C - ReadM SNP 0047.scaffold00169 363788 1 T A - ReadM SNP 0047.scaffold00169 363871 1 T C - ReadM SNP 0047.scaffold00169 363972 1 A T - ReadM SNP 0047.scaffold00169 363994 1 T C - ReadM SNP 0047.scaffold00169 364213 1 A T - ReadM SNP 0047.scaffold00169 364332 1 G T - ReadM SNP 0047.scaffold00169 364370 1 G T - ReadM SNP 0047.scaffold00169 364467 1 A C - ReadM SNP 0047.scaffold00169 364612 1 G T - ReadM SNP 0047.scaffold00169 364960 1 G A - ReadM SNP 0047.scaffold00169 365424 1 G A - ReadM SNP 0047.scaffold00169 365467 1 C T - ReadM SNP 0047.scaffold00169 365609 1 C T - ReadM SNP 0047.scaffold00169 365734 1 A G - ReadM SNP 0047.scaffold00169 366063 1 C T - ReadM SNP 0047.scaffold00169 366436 1 A G - ReadM SNP 0047.scaffold00169 366556 1 A G - ReadM SNP 0047.scaffold00169 366858 1 G A - ReadM SNP 0047.scaffold00169 367103 1 G A - ReadM SNP 0047.scaffold00169 367441 1 G A - ReadM SNP 0047.scaffold00169 367608 1 T G - ReadM SNP 0047.scaffold00169 367666 1 T C - ReadM SNP 0047.scaffold00169 367872 1 G A - ReadM SNP 0047.scaffold00169 367902 1 A G - ReadM SNP 0047.scaffold00169 368324 1 A G - ReadM SNP 0047.scaffold00169 368395 1 A C - ReadM SNP 0047.scaffold00169 368407 1 G A - ReadM SNP 0047.scaffold00169 368570 1 T C - ReadM SNP 0047.scaffold00169 368577 1 G A - ReadM INDEL 0047.scaffold00169 368647 1 A . - ReadM SNP 0047.scaffold00169 368805 1 C T - ReadM SNP 0047.scaffold00169 368809 1 C G - ReadM SNP 0047.scaffold00169 370465 1 G A - ReadM SNP 0047.scaffold00169 370497 1 G A - ReadM SNP 0047.scaffold00169 370582 1 A G - ReadM SNP 0047.scaffold00169 370683 1 C T - ReadM SNP 0047.scaffold00169 370987 1 T C - ReadM SNP 0047.scaffold00169 371113 1 G A - ReadM SNP 0047.scaffold00169 371218 1 G T - ReadM SNP 0047.scaffold00169 371619 1 A G - ReadM SNP 0047.scaffold00169 371780 1 T C - ReadM SNP 0047.scaffold00169 371838 1 G A - ReadM SNP 0047.scaffold00169 372052 1 A T - ReadM SNP 0047.scaffold00169 372320 1 T A - ReadM SNP 0047.scaffold00169 372332 1 G A - ReadM SNP 0047.scaffold00169 372582 1 G A - ReadM SNP 0047.scaffold00169 372625 1 T C - ReadM SNP 0047.scaffold00169 372647 1 G A - ReadM SNP 0047.scaffold00169 372899 1 T C - ReadM SNP 0047.scaffold00169 373285 1 A G - ReadM SNP 0047.scaffold00169 373359 1 T C - ReadM SNP 0047.scaffold00169 373953 1 T A - ReadM SNP 0047.scaffold00169 373992 1 A G - ReadM SNP 0047.scaffold00169 374028 1 G T - ReadM SNP 0047.scaffold00169 374208 1 A G - ReadM SNP 0047.scaffold00169 374637 1 T C - ReadM SNP 0047.scaffold00169 374742 1 G A - ReadM INDEL 0047.scaffold00169 375053 3 ... AGT - ReadM SNP 0047.scaffold00169 375275 1 T C - ReadM SNP 0047.scaffold00169 375634 1 C A - ReadM SNP 0047.scaffold00169 375980 1 C T - ReadM SNP 0047.scaffold00169 376172 1 T G - ReadM SNP 0047.scaffold00169 376676 1 G A - ReadM SNP 0047.scaffold00169 377130 1 T C - ReadM SNP 0047.scaffold00169 377230 1 T C - ReadM SNP 0047.scaffold00169 377285 1 G C - ReadM SNP 0047.scaffold00169 377810 1 A G - ReadM SNP 0047.scaffold00169 377874 1 T G - ReadM SNP 0047.scaffold00169 378006 1 T A - ReadM SNP 0047.scaffold00169 378136 1 T C - ReadM SNP 0047.scaffold00169 378301 1 G A - ReadM SNP 0047.scaffold00169 378322 1 G A - ReadM SNP 0047.scaffold00169 378501 1 C T - ReadM SNP 0047.scaffold00169 378610 1 T G - ReadM SNP 0047.scaffold00169 378894 1 G T - ReadM SNP 0047.scaffold00169 379061 1 A G - ReadM SNP 0047.scaffold00169 379094 1 T C - ReadM SNP 0047.scaffold00169 379891 1 T C - ReadM SNP 0047.scaffold00169 380010 1 A G - ReadM SNP 0047.scaffold00169 380116 1 T C - ReadM SNP 0047.scaffold00169 380251 1 C A - ReadM SNP 0047.scaffold00169 380280 1 G A - ReadM SNP 0047.scaffold00169 380284 1 A G - ReadM SNP 0047.scaffold00169 380823 1 A C - ReadM SNP 0047.scaffold00169 381390 1 A G - ReadM SNP 0047.scaffold00169 382211 1 C G - ReadM SNP 0047.scaffold00169 382227 1 A G - ReadM SNP 0047.scaffold00169 382230 1 A G - ReadM SNP 0047.scaffold00169 382295 1 A G - ReadM SNP 0047.scaffold00169 382411 1 G A - ReadM SNP 0047.scaffold00169 382631 1 A G - ReadM INDEL 0047.scaffold00169 382692 1 C . - ReadM SNP 0047.scaffold00169 382906 1 G A - ReadM SNP 0047.scaffold00169 383074 1 T A - ReadM SNP 0047.scaffold00169 383285 1 C T - ReadM SNP 0047.scaffold00169 383903 1 C T - ReadM SNP 0047.scaffold00169 384603 1 T A - ReadM SNP 0047.scaffold00169 384735 1 G A - ReadM SNP 0047.scaffold00169 385353 1 A G - ReadM SNP 0047.scaffold00169 385362 1 T C - ReadM SNP 0047.scaffold00169 385763 1 C G - ReadM SNP 0047.scaffold00169 386011 1 A G - ReadM SNP 0047.scaffold00169 386210 1 C T - ReadM SNP 0047.scaffold00169 386267 1 G T - ReadM SNP 0047.scaffold00169 386766 1 A G - ReadM SNP 0047.scaffold00169 386773 1 A G - Both SNP 0047.scaffold00169 387097 1 T A scaffold14183 ReadM SNP 0047.scaffold00169 389231 1 T C - ReadM SNP 0047.scaffold00169 389683 1 G A - ReadM SNP 0047.scaffold00169 390210 1 T A - ReadM SNP 0047.scaffold00169 392946 1 A C - ReadM SNP 0047.scaffold00169 393046 1 C A - ReadM SNP 0047.scaffold00169 393203 1 G A - ReadM SNP 0047.scaffold00169 393757 1 G A - ReadM SNP 0047.scaffold00169 394001 1 A C - ReadM SNP 0047.scaffold00169 394026 1 G A - ReadM INDEL 0047.scaffold00169 394330 1 . A - ReadM SNP 0047.scaffold00169 394452 1 A G - ReadM SNP 0047.scaffold00169 394709 1 A G - ReadM SNP 0047.scaffold00169 394985 1 C A - ReadM SNP 0047.scaffold00169 395247 1 T C - ScafM INDEL 0047.scaffold00169 395327 2 .. AA scaffold15096 ReadM SNP 0047.scaffold00169 395774 1 C A - ReadM SNP 0047.scaffold00169 395828 1 G T - ReadM SNP 0047.scaffold00169 396009 1 T C - ReadM SNP 0047.scaffold00169 396015 1 G A - ReadM SNP 0047.scaffold00169 396132 1 A C - ReadM SNP 0047.scaffold00169 396210 1 A G - ReadM SNP 0047.scaffold00169 396251 1 A G - ReadM SNP 0047.scaffold00169 396885 1 G A - ReadM SNP 0047.scaffold00169 397075 1 C T - ReadM INDEL 0047.scaffold00169 397118 2 AT .. - ReadM SNP 0047.scaffold00169 397440 1 A G - Both SNP 0047.scaffold00169 397653 1 A T scaffold15096 Both SNP 0047.scaffold00169 397827 1 C A scaffold15096 Both SNP 0047.scaffold00169 398433 1 A T scaffold15096 Both INDEL 0047.scaffold00169 399106 1 A . scaffold15096 Both SNP 0047.scaffold00169 399131 1 T G scaffold15096 Both SNP 0047.scaffold00169 399282 1 C G scaffold15096 Both SNP 0047.scaffold00169 399539 1 C T scaffold15096 ScafM INDEL 0047.scaffold00169 401641 7 ....... CTGGTTT scaffold15096 ScafM INDEL 0047.scaffold00169 401642 1 . C scaffold15096 Both SNP 0047.scaffold00169 402468 1 T C scaffold15096 ScafM SNP 0047.scaffold00169 402984 1 C T scaffold15096 ReadM SNP 0047.scaffold00169 404451 1 G A - ReadM SNP 0047.scaffold00169 405131 1 G T - Both SNP 0047.scaffold00169 406972 1 G A scaffold15096 ReadM SNP 0047.scaffold00169 407400 1 G A - ReadM SNP 0047.scaffold00169 408664 1 G A - ReadM SNP 0047.scaffold00169 408842 1 T A - ScafM INDEL 0047.scaffold00169 411539 19 ................... TAAAGGATTAGGTTAAAAC scaffold38562 ScafM SNP 0047.scaffold00169 411552 1 C G scaffold38562 ScafM SNP 0047.scaffold00169 413275 1 A G scaffold15096 ScafM INDEL 0047.scaffold00169 413422 1 C . scaffold15096 ScafM INDEL 0047.scaffold00169 413441 1 T . scaffold15096 ScafM SNP 0047.scaffold00169 413460 1 C T scaffold15096 ScafM INDEL 0047.scaffold00169 413533 1 . C scaffold15096 Both INDEL 0047.scaffold00169 413550 1 G . scaffold15096 ScafM SNP 0047.scaffold00169 413766 1 G A scaffold15096 ScafM SNP 0047.scaffold00169 413805 1 A G scaffold15096 Both SNP 0047.scaffold00169 413972 1 T C scaffold15096 ScafM SNP 0047.scaffold00169 413985 1 C G scaffold15096 ScafM SNP 0047.scaffold00169 414003 1 A T scaffold15096 ReadM INDEL 0047.scaffold00169 414179 1 C . - ReadM SNP 0047.scaffold00169 414629 1 C T - ReadM SNP 0047.scaffold00169 414723 1 A C - ReadM SNP 0047.scaffold00169 414759 1 A G - ReadM SNP 0047.scaffold00169 414947 1 G C - ReadM SNP 0047.scaffold00169 415313 1 A G - Both SNP 0047.scaffold00169 415626 1 T A scaffold11904 Both SNP 0047.scaffold00169 418152 1 C G scaffold11904 ReadM SNP 0047.scaffold00169 420215 1 C T - ReadM SNP 0047.scaffold00169 420289 1 C T - ScafM INDEL 0047.scaffold00169 420473 2 .. AA scaffold11904 Both INDEL 0047.scaffold00169 420869 1 . A scaffold11904 Both SNP 0047.scaffold00169 421350 1 T A scaffold11904 Both SNP 0047.scaffold00169 421923 1 A C scaffold11904 ReadM SNP 0047.scaffold00169 422063 1 C T - Both SNP 0047.scaffold00169 422184 1 G T scaffold11904 ScafM SNP 0047.scaffold00169 422200 1 G T scaffold11904 ScafM SNP 0047.scaffold00169 422203 1 C T scaffold11904 ReadM SNP 0047.scaffold00169 423214 1 A G - ReadM SNP 0047.scaffold00169 423804 1 A T - ReadM SNP 0047.scaffold00169 423968 1 C T - ReadM SNP 0047.scaffold00169 425026 1 G T - ReadM SNP 0047.scaffold00169 425106 1 T A - ReadM SNP 0047.scaffold00169 425653 1 T C - ReadM SNP 0047.scaffold00169 425660 1 G A - ReadM SNP 0047.scaffold00169 425773 1 G T - ReadM SNP 0047.scaffold00169 425809 1 C T - ReadM SNP 0047.scaffold00169 426192 1 G A - ReadM SNP 0047.scaffold00169 426329 1 T C - ReadM SNP 0047.scaffold00169 426435 1 G T - ReadM SNP 0047.scaffold00169 426784 1 A G - ReadM SNP 0047.scaffold00169 427046 1 A G - ReadM INDEL 0047.scaffold00169 427534 2 TA .. - Both INDEL 0047.scaffold00169 428676 1 T . scaffold11904 ReadM SNP 0047.scaffold00169 428844 1 G T - Both SNP 0047.scaffold00169 429003 1 G A scaffold11904 ReadM SNP 0047.scaffold00169 429417 1 C G - ReadM SNP 0047.scaffold00169 429433 1 T C - ReadM SNP 0047.scaffold00169 429502 1 A C - Both SNP 0047.scaffold00169 429554 1 A T scaffold11904 Both SNP 0047.scaffold00169 429741 1 C T scaffold11904 Both SNP 0047.scaffold00169 429784 1 C T scaffold11904 Both SNP 0047.scaffold00169 429976 1 G A scaffold11904 Both SNP 0047.scaffold00169 429990 1 C G scaffold11904 ReadM SNP 0047.scaffold00169 458960 1 T C - ReadM SNP 0047.scaffold00169 459074 1 C A - ReadM SNP 0047.scaffold00169 459872 1 T G - Both SNP 0047.scaffold00169 460093 1 C T scaffold1751 Both SNP 0047.scaffold00169 460654 1 A G scaffold1751 Both SNP 0047.scaffold00169 460897 1 A T scaffold1751 ReadM SNP 0047.scaffold00169 461786 1 T C - ReadM SNP 0047.scaffold00169 461859 1 T C - ReadM SNP 0047.scaffold00169 461970 1 T C - ReadM SNP 0047.scaffold00169 462029 1 T C - ReadM SNP 0047.scaffold00169 462047 1 A T - ReadM SNP 0047.scaffold00169 463883 1 G T - ReadM SNP 0047.scaffold00169 464221 1 A T - Both SNP 0047.scaffold00169 464604 1 T G scaffold1751 Both SNP 0047.scaffold00169 464655 1 A G scaffold1751 ReadM SNP 0047.scaffold00169 464766 1 T C - Both SNP 0047.scaffold00169 465003 1 G T scaffold1751 ReadM SNP 0047.scaffold00169 465273 1 G A - ReadM SNP 0047.scaffold00169 465502 1 C G - ReadM SNP 0047.scaffold00169 465784 1 A T - ReadM SNP 0047.scaffold00169 466577 1 A G - ReadM SNP 0047.scaffold00169 467059 1 G A - ReadM SNP 0047.scaffold00169 467154 1 C T - ReadM SNP 0047.scaffold00169 467528 1 G A - ReadM SNP 0047.scaffold00169 467673 1 C T - ReadM SNP 0047.scaffold00169 467720 1 T A - ReadM SNP 0047.scaffold00169 467857 1 T A - ReadM SNP 0047.scaffold00169 468024 1 T C - Both SNP 0047.scaffold00169 471848 1 A C scaffold1751 ScafM INDEL 0047.scaffold00169 471881 3 GCA ... scaffold1751 Both SNP 0047.scaffold00169 472007 1 A C scaffold1751 Both SNP 0047.scaffold00169 472306 1 C T scaffold1751 Both SNP 0047.scaffold00169 472362 1 G T scaffold1751 Both INDEL 0047.scaffold00169 472404 1 . A scaffold1751 ReadM SNP 0047.scaffold00169 473431 1 A G - ReadM SNP 0047.scaffold00169 473533 1 C T - ReadM SNP 0047.scaffold00169 473910 1 G C - ReadM SNP 0047.scaffold00169 473921 1 T C - ReadM SNP 0047.scaffold00169 474284 1 C G - ReadM SNP 0047.scaffold00169 480853 1 C G - ReadM SNP 0047.scaffold00169 483190 1 G T - ReadM SNP 0047.scaffold00169 483477 1 C T - ReadM SNP 0047.scaffold00169 484082 1 G A - ReadM SNP 0047.scaffold00169 484625 1 C T - ReadM SNP 0047.scaffold00169 485076 1 T C - ReadM SNP 0047.scaffold00169 485402 1 T C - ReadM SNP 0047.scaffold00169 485574 1 G A - ReadM SNP 0047.scaffold00169 485792 1 T C - ReadM SNP 0047.scaffold00169 485994 1 G A - ReadM SNP 0047.scaffold00169 486405 1 A C - ReadM SNP 0047.scaffold00169 486782 1 A G - ReadM SNP 0047.scaffold00169 487101 1 T C - ReadM SNP 0047.scaffold00169 487339 1 A G - ReadM SNP 0047.scaffold00169 487475 1 T C - ReadM SNP 0047.scaffold00169 487526 1 G A - ReadM SNP 0047.scaffold00169 487782 1 A T - ReadM SNP 0047.scaffold00169 488141 1 G A - ReadM SNP 0047.scaffold00169 488212 1 G A - ReadM SNP 0047.scaffold00169 488303 1 T A - ReadM SNP 0047.scaffold00169 488315 1 T C - ReadM INDEL 0047.scaffold00169 488719 2 .. TG - ReadM SNP 0047.scaffold00169 488822 1 C T - ReadM SNP 0047.scaffold00169 488870 1 T C - ReadM SNP 0047.scaffold00169 488959 1 G T - ReadM SNP 0047.scaffold00169 489327 1 A G - ReadM SNP 0047.scaffold00169 489818 1 A G - ReadM SNP 0047.scaffold00169 489854 1 G C - ReadM SNP 0047.scaffold00169 490595 1 T C - ReadM SNP 0047.scaffold00169 490687 1 T C - ReadM SNP 0047.scaffold00169 490690 1 A G - ReadM SNP 0047.scaffold00169 490828 1 C T - ReadM SNP 0047.scaffold00169 491250 1 G A - ReadM SNP 0047.scaffold00169 491299 1 G T - ReadM SNP 0047.scaffold00169 491797 1 T C - ReadM SNP 0047.scaffold00169 497922 1 T G - ReadM SNP 0047.scaffold00169 498722 1 G A - ReadM SNP 0047.scaffold00169 498756 1 T C - ReadM SNP 0047.scaffold00169 499253 1 T C - ReadM SNP 0047.scaffold00169 499298 1 C A - ReadM SNP 0047.scaffold00169 499385 1 C T - ReadM SNP 0047.scaffold00169 499660 1 A C - ReadM INDEL 0047.scaffold00169 499815 1 . T - ReadM SNP 0047.scaffold00169 499942 1 A T - ReadM SNP 0047.scaffold00169 500156 1 G A - ReadM SNP 0047.scaffold00169 500668 1 A G - ReadM SNP 0047.scaffold00169 501029 1 A G - ReadM SNP 0047.scaffold00169 501522 1 T C - ReadM SNP 0047.scaffold00169 502283 1 A T - ReadM SNP 0047.scaffold00169 502530 1 C G - ReadM SNP 0047.scaffold00169 502532 1 A G - ReadM SNP 0047.scaffold00169 502684 1 T C - ReadM SNP 0047.scaffold00169 502691 1 C T - ReadM SNP 0047.scaffold00169 502780 1 G A - ReadM SNP 0047.scaffold00169 503035 1 T C - ReadM SNP 0047.scaffold00169 503128 1 G T - ReadM SNP 0047.scaffold00169 503220 1 G T - ReadM SNP 0047.scaffold00169 503308 1 C T - ReadM SNP 0047.scaffold00169 506713 1 G T - ReadM SNP 0047.scaffold00169 507236 1 T C - ReadM SNP 0047.scaffold00169 507429 1 G A - ReadM SNP 0047.scaffold00169 507904 1 A G - ReadM SNP 0047.scaffold00169 508003 1 T C - ReadM SNP 0047.scaffold00169 508116 1 A G - ReadM SNP 0047.scaffold00169 508175 1 A G - ReadM SNP 0047.scaffold00169 508428 1 C T - ReadM SNP 0047.scaffold00169 508447 1 A G - ReadM SNP 0047.scaffold00169 508708 1 C G - ReadM SNP 0047.scaffold00169 508715 1 C T - ReadM SNP 0047.scaffold00169 508741 1 G A - ReadM SNP 0047.scaffold00169 508807 1 A G - ReadM SNP 0047.scaffold00169 508852 1 T A - ReadM SNP 0047.scaffold00169 509041 1 G T - ReadM SNP 0047.scaffold00169 509082 1 G A - ReadM SNP 0047.scaffold00169 509342 1 A G - ReadM SNP 0047.scaffold00169 509407 1 T C - ReadM SNP 0047.scaffold00169 509796 1 G A - ReadM SNP 0047.scaffold00169 514360 1 A G - ReadM SNP 0047.scaffold00169 518100 1 G T - ReadM SNP 0047.scaffold00169 518203 1 T A - ReadM SNP 0047.scaffold00169 518408 1 T C - ReadM SNP 0047.scaffold00169 518425 1 C T - ReadM SNP 0047.scaffold00169 518642 1 C T - ReadM SNP 0047.scaffold00169 518866 1 C A - ReadM SNP 0047.scaffold00169 518878 1 G A - ReadM SNP 0047.scaffold00169 518966 1 T G - ReadM SNP 0047.scaffold00169 518974 1 T C - ReadM SNP 0047.scaffold00169 519081 1 G A - ReadM SNP 0047.scaffold00169 519133 1 G C - ReadM SNP 0047.scaffold00169 519214 2 AT GC - ReadM SNP 0047.scaffold00169 519298 1 T C - ReadM SNP 0047.scaffold00169 519375 1 C T - ReadM SNP 0047.scaffold00169 519412 1 G A - ReadM SNP 0047.scaffold00169 519550 1 A G - ReadM SNP 0047.scaffold00169 519559 1 A G - ReadM SNP 0047.scaffold00169 519564 1 A G - ReadM SNP 0047.scaffold00169 519680 1 C T - ReadM SNP 0047.scaffold00169 519692 1 A G - ReadM SNP 0047.scaffold00169 520188 1 T C - ReadM SNP 0047.scaffold00169 520515 1 G C - ReadM SNP 0047.scaffold00169 521456 1 C T - ReadM SNP 0047.scaffold00169 521497 1 T C - ReadM SNP 0047.scaffold00169 522083 1 C T - ReadM SNP 0047.scaffold00169 522396 1 T G - ReadM SNP 0047.scaffold00169 522563 1 G A - ReadM SNP 0047.scaffold00169 523033 1 A G - ReadM SNP 0047.scaffold00169 523048 1 C T - ReadM SNP 0047.scaffold00169 523315 1 A C - Both SNP 0047.scaffold00169 524979 1 T A scaffold16023 Both INDEL 0047.scaffold00169 525256 1 A . scaffold16023 Both SNP 0047.scaffold00169 525537 1 T C scaffold16023 Both INDEL 0047.scaffold00169 525689 1 . A scaffold16023 Both SNP 0047.scaffold00169 525777 1 T C scaffold16023 Both SNP 0047.scaffold00169 526035 1 C T scaffold16023 ScafM SNP 0047.scaffold00169 526474 1 C T scaffold16023 Both SNP 0047.scaffold00169 526741 1 C T scaffold16023 ReadM SNP 0047.scaffold00169 526892 1 C T - ReadM SNP 0047.scaffold00169 526903 1 C A - ReadM SNP 0047.scaffold00169 527562 1 A G - ReadM SNP 0047.scaffold00169 529095 1 T A - Both SNP 0047.scaffold00169 529703 1 A G scaffold16023 ScafM SNP 0047.scaffold00169 529807 1 A G scaffold16023 ScafM SNP 0047.scaffold00169 529951 1 G C scaffold16023 Both SNP 0047.scaffold00169 529970 1 G T scaffold16023 ScafM SNP 0047.scaffold00169 530331 1 G A scaffold8486 ScafM SNP 0047.scaffold00169 530333 1 G A scaffold8486 ScafM SNP 0047.scaffold00169 530459 1 A G scaffold8486 ScafM SNP 0047.scaffold00169 530550 1 A G scaffold8486 ScafM SNP 0047.scaffold00169 530565 2 TT GC scaffold8486 ScafM SNP 0047.scaffold00169 530643 1 T G scaffold8486 ReadM SNP 0047.scaffold00169 530668 1 G T - ReadM SNP 0047.scaffold00169 531314 1 G T - ReadM SNP 0047.scaffold00169 532007 1 C T - ReadM SNP 0047.scaffold00169 532074 1 G A - ScafM INDEL 0047.scaffold00169 532485 1 . T scaffold16023 ScafM SNP 0047.scaffold00169 532502 1 A G scaffold16023 Both SNP 0047.scaffold00169 532657 1 A G scaffold16023 ScafM SNP 0047.scaffold00169 532666 1 C T scaffold16023 ScafM SNP 0047.scaffold00169 532838 1 A G scaffold16023 ScafM SNP 0047.scaffold00169 532890 1 G A scaffold16023 ScafM SNP 0047.scaffold00169 533254 1 C T scaffold16023 Both SNP 0047.scaffold00169 533268 1 G A scaffold16023 Both SNP 0047.scaffold00169 533299 1 C T scaffold16023 ReadM SNP 0047.scaffold00169 533803 1 G T - ReadM SNP 0047.scaffold00169 533827 1 T C - ReadM SNP 0047.scaffold00169 534095 1 G A - ReadM SNP 0047.scaffold00169 534598 1 G A - Both SNP 0047.scaffold00169 535082 1 T A scaffold16023 ScafM SNP 0047.scaffold00169 535132 1 A T scaffold16023 ReadM SNP 0047.scaffold00169 535636 1 G A - ReadM SNP 0047.scaffold00169 535837 1 T C - ReadM SNP 0047.scaffold00169 536077 1 T A - ReadM INDEL 0047.scaffold00169 536082 1 . G - Both SNP 0047.scaffold00169 536322 1 T A scaffold16023 Both SNP 0047.scaffold00169 536374 1 A G scaffold16023 Both SNP 0047.scaffold00169 536392 1 G T scaffold16023 ReadM SNP 0047.scaffold00169 536826 1 A C - ReadM SNP 0047.scaffold00169 537090 1 C T - Both SNP 0047.scaffold00169 537326 1 G T scaffold16023 Both SNP 0047.scaffold00169 537339 1 T C scaffold16023 Both SNP 0047.scaffold00169 537433 1 C A scaffold16023 ReadM SNP 0047.scaffold00169 537450 1 C G - ReadM SNP 0047.scaffold00169 537967 1 G C - ReadM SNP 0047.scaffold00169 538401 1 T A - ReadM SNP 0047.scaffold00169 538414 1 C T - ReadM SNP 0047.scaffold00169 538512 1 A C - ReadM SNP 0047.scaffold00169 538546 1 C T - ReadM SNP 0047.scaffold00169 538657 1 G A - ReadM SNP 0047.scaffold00169 539564 1 T C - ReadM SNP 0047.scaffold00169 539666 1 G A - ReadM SNP 0047.scaffold00169 539691 1 C T - ReadM SNP 0047.scaffold00169 539894 1 T C - ReadM SNP 0047.scaffold00169 541934 1 C G - ReadM SNP 0047.scaffold00169 542359 1 A G - ReadM SNP 0047.scaffold00169 542481 1 C G - ReadM SNP 0047.scaffold00169 542573 1 T C - ReadM SNP 0047.scaffold00169 542865 1 G C - ReadM SNP 0047.scaffold00169 542973 1 C A - ReadM SNP 0047.scaffold00169 543013 1 A G - ReadM SNP 0047.scaffold00169 543546 1 A G - ReadM SNP 0047.scaffold00169 543676 1 T C - ReadM SNP 0047.scaffold00169 543680 1 C T - ReadM SNP 0047.scaffold00169 543718 1 C A - ReadM SNP 0047.scaffold00169 543913 1 C G - ReadM SNP 0047.scaffold00169 543932 1 C T - ReadM INDEL 0047.scaffold00169 544045 1 . C - ReadM SNP 0047.scaffold00169 544236 1 A G - Both SNP 0047.scaffold00169 544351 1 C T scaffold16023 ReadM SNP 0047.scaffold00169 544461 1 G A - Both SNP 0047.scaffold00169 544567 1 G A scaffold16023 ScafM INDEL 0047.scaffold00169 544665 1 A . scaffold16023 Both SNP 0047.scaffold00169 544967 1 G A scaffold16023 ScafM SNP 0047.scaffold00169 545465 1 A C scaffold16023 Both SNP 0047.scaffold00169 545507 1 A C scaffold16023 ScafM SNP 0047.scaffold00169 545545 1 G A scaffold16023 ScafM SNP 0047.scaffold00169 546084 1 T A scaffold43676 ScafM SNP 0047.scaffold00169 546297 1 A T scaffold43676 ScafM SNP 0047.scaffold00169 546300 2 CT TC scaffold43676 ScafM SNP 0047.scaffold00169 546341 1 A G scaffold43676 ScafM SNP 0047.scaffold00169 546348 1 G A scaffold43676 ScafM SNP 0047.scaffold00169 546359 1 T G scaffold43676 ScafM SNP 0047.scaffold00169 546396 1 G A scaffold43676 ScafM SNP 0047.scaffold00169 546406 1 A G scaffold43676 ScafM SNP 0047.scaffold00169 546506 1 T C scaffold43676 ScafM SNP 0047.scaffold00169 546520 1 T C scaffold43676 ScafM SNP 0047.scaffold00169 546523 1 T C scaffold43676 ScafM SNP 0047.scaffold00169 546561 2 CA TG scaffold43676 ScafM SNP 0047.scaffold00169 546574 1 G T scaffold43676 ScafM SNP 0047.scaffold00169 546581 1 C T scaffold43676 ScafM SNP 0047.scaffold00169 546586 1 A G scaffold43676 ScafM SNP 0047.scaffold00169 546628 1 T A scaffold43676 Both SNP 0047.scaffold00169 546732 1 G A scaffold43676 ScafM INDEL 0047.scaffold00169 546877 72 ........................................................................ CCTAAAGTACTTTATTTAAATAACTAATTTTGTTTAATATCAGCTATGTAAATTAACTAAATTTGGAATTTA scaffold43676 ScafM SNP 0047.scaffold00169 547166 1 A G scaffold43676 ScafM SNP 0047.scaffold00169 547196 1 C G scaffold43676 ReadM SNP 0047.scaffold00169 547774 1 A G - ReadM SNP 0047.scaffold00169 547910 1 T C - ReadM SNP 0047.scaffold00169 548008 1 A G - ReadM SNP 0047.scaffold00169 548112 1 G C - ReadM SNP 0047.scaffold00169 548357 1 C T - ReadM SNP 0047.scaffold00169 548630 1 T C - ReadM SNP 0047.scaffold00169 548707 1 A G - ReadM SNP 0047.scaffold00169 548727 1 G T - ReadM SNP 0047.scaffold00169 548761 1 G T - ReadM SNP 0047.scaffold00169 548836 1 T C - ReadM SNP 0047.scaffold00169 549832 1 C A - ReadM SNP 0047.scaffold00169 549841 1 C T - ReadM SNP 0047.scaffold00169 549939 1 T C - ReadM SNP 0047.scaffold00169 550091 1 G A - ReadM SNP 0047.scaffold00169 550450 1 C A - ReadM SNP 0047.scaffold00169 550594 1 G A - ReadM SNP 0047.scaffold00169 550845 1 G A - ReadM SNP 0047.scaffold00169 551278 1 G A - ReadM SNP 0047.scaffold00169 551285 1 A T - ReadM SNP 0047.scaffold00169 551570 1 A G - ReadM SNP 0047.scaffold00169 551583 1 G A - ReadM SNP 0047.scaffold00169 551792 1 G A - ReadM SNP 0047.scaffold00169 551861 1 T A - ReadM SNP 0047.scaffold00169 552045 1 C A - ReadM SNP 0047.scaffold00169 552487 1 T C - ReadM SNP 0047.scaffold00169 552765 1 C A - ReadM SNP 0047.scaffold00169 552950 1 A G - ReadM SNP 0047.scaffold00169 553990 1 C T - ReadM SNP 0047.scaffold00169 554368 1 A G - ReadM SNP 0047.scaffold00169 554380 1 C T - ReadM SNP 0047.scaffold00169 554572 1 G T - ReadM SNP 0047.scaffold00169 554581 1 A G - ReadM SNP 0047.scaffold00169 554681 1 A G - Both SNP 0047.scaffold00169 554954 1 A G scaffold3999 Both SNP 0047.scaffold00169 555165 1 A G scaffold3999 Both INDEL 0047.scaffold00169 555256 1 . A scaffold3999 Both SNP 0047.scaffold00169 555511 1 A G scaffold3999 ReadM SNP 0047.scaffold00169 555994 1 T C - ReadM SNP 0047.scaffold00169 556291 1 T C - ReadM SNP 0047.scaffold00169 556505 1 G A - ReadM SNP 0047.scaffold00169 556994 1 T C - ReadM SNP 0047.scaffold00169 557173 1 T C - ReadM SNP 0047.scaffold00169 557821 1 G A - ReadM SNP 0047.scaffold00169 557927 1 A G - ReadM SNP 0047.scaffold00169 557932 1 T G - ReadM SNP 0047.scaffold00169 558018 1 T A - ReadM SNP 0047.scaffold00169 558523 1 G T - ReadM SNP 0047.scaffold00169 558908 1 T C - ReadM SNP 0047.scaffold00169 559107 1 T C - ReadM SNP 0047.scaffold00169 559194 1 G T - ReadM SNP 0047.scaffold00169 559354 1 G A - ReadM SNP 0047.scaffold00169 559423 1 G A - ReadM SNP 0047.scaffold00169 559544 1 G A - ReadM SNP 0047.scaffold00169 559659 1 T A - ScafM SNP 0047.scaffold00169 560349 1 T G scaffold3999 ScafM SNP 0047.scaffold00169 560409 1 G A scaffold3999 ScafM INDEL 0047.scaffold00169 560495 1 . T scaffold3999 ScafM INDEL 0047.scaffold00169 560518 1 . C scaffold3999 ReadM SNP 0047.scaffold00169 561340 1 T C - Both SNP 0047.scaffold00169 562620 1 T A scaffold3999 Both SNP 0047.scaffold00169 562908 1 C G scaffold3999 Both SNP 0047.scaffold00169 562959 1 G T scaffold3999 Both SNP 0047.scaffold00169 563015 1 T G scaffold3999 Both SNP 0047.scaffold00169 563174 1 A G scaffold3999 ReadM SNP 0047.scaffold00169 563291 1 G T - ReadM INDEL 0047.scaffold00169 563746 1 G . - ReadM SNP 0047.scaffold00169 563842 1 C T - ReadM SNP 0047.scaffold00169 563860 1 G A - ReadM SNP 0047.scaffold00169 564140 1 G A - ReadM SNP 0047.scaffold00169 564558 1 C T - ReadM SNP 0047.scaffold00169 564616 1 T G - ReadM SNP 0047.scaffold00169 564702 1 T C - ReadM SNP 0047.scaffold00169 564829 1 A G - ReadM SNP 0047.scaffold00169 564910 1 C T - ReadM SNP 0047.scaffold00169 564931 1 G A - ReadM SNP 0047.scaffold00169 565158 1 A G - ReadM SNP 0047.scaffold00169 565516 1 G A - ReadM SNP 0047.scaffold00169 565521 1 A G - ReadM SNP 0047.scaffold00169 565688 1 A G - ReadM SNP 0047.scaffold00169 565734 1 C A - ReadM SNP 0047.scaffold00169 565825 1 T G - ReadM SNP 0047.scaffold00169 565915 1 T G - ReadM SNP 0047.scaffold00169 566113 1 C T - ReadM SNP 0047.scaffold00169 566118 1 C T - ReadM INDEL 0047.scaffold00169 567726 1 . T - ReadM SNP 0047.scaffold00169 569722 1 T G - ReadM SNP 0047.scaffold00169 569728 1 G T - Both SNP 0047.scaffold00169 570482 1 A T scaffold3999 Both SNP 0047.scaffold00169 570546 1 C A scaffold3999 Both INDEL 0047.scaffold00169 570772 1 A . scaffold3999 Both SNP 0047.scaffold00169 570927 1 G A scaffold3999 ScafM INDEL 0047.scaffold00169 572378 24 ATATTTTGACAGATTGAATGTGCA ........................ scaffold3999 Both SNP 0047.scaffold00169 572689 1 T G scaffold3999 Both SNP 0047.scaffold00169 574735 1 T G scaffold3999 Both INDEL 0047.scaffold00169 575134 3 ... TAA scaffold3999 ReadM INDEL 0047.scaffold00169 575139 3 ... ATG - Both SNP 0047.scaffold00169 575470 1 A G scaffold3999 ScafM INDEL 0047.scaffold00169 575496 3 GTC ... scaffold3999 Both SNP 0047.scaffold00169 576120 1 G C scaffold3999 Both SNP 0047.scaffold00169 576127 1 T C scaffold3999 ReadM SNP 0047.scaffold00169 576388 1 A G - Both SNP 0047.scaffold00169 576579 1 T C scaffold3999 ReadM SNP 0047.scaffold00169 576886 1 G A - ReadM SNP 0047.scaffold00169 577029 1 A G - ReadM INDEL 0047.scaffold00169 578797 1 C . - ReadM SNP 0047.scaffold00169 578968 1 A G - Both SNP 0047.scaffold00169 579188 1 A T scaffold3999 ScafM SNP 0047.scaffold00169 579300 1 T A scaffold3999 Both SNP 0047.scaffold00169 579461 1 T C scaffold3999 ScafM SNP 0047.scaffold00169 579472 1 G A scaffold3999 Both SNP 0047.scaffold00169 579492 1 G A scaffold3999 Both SNP 0047.scaffold00169 580838 1 C G scaffold3999 Both SNP 0047.scaffold00169 580871 1 T A scaffold3999 Both SNP 0047.scaffold00169 580971 1 C T scaffold3999 ReadM SNP 0047.scaffold00169 581538 1 T C - ReadM SNP 0047.scaffold00169 581599 1 A T - ReadM SNP 0047.scaffold00169 581730 1 T C - ReadM SNP 0047.scaffold00169 582249 1 G A - ReadM SNP 0047.scaffold00169 583164 1 T C - ReadM SNP 0047.scaffold00169 583275 1 A C - ReadM SNP 0047.scaffold00169 583772 1 G A - ReadM SNP 0047.scaffold00169 584693 1 C T - ReadM SNP 0047.scaffold00169 585091 1 C T - ScafM SNP 0047.scaffold00169 587607 1 C A scaffold19356 ReadM SNP 0047.scaffold00169 588138 1 A T - ReadM SNP 0047.scaffold00169 588633 1 C T - ReadM SNP 0047.scaffold00169 589903 1 A G - ReadM SNP 0047.scaffold00169 589925 1 T A - ReadM SNP 0047.scaffold00169 590001 1 G A - ReadM SNP 0047.scaffold00169 590078 1 T C - ReadM SNP 0047.scaffold00169 590318 1 T C - ReadM SNP 0047.scaffold00169 590479 1 G T - ReadM SNP 0047.scaffold00169 590482 1 C G - ReadM SNP 0047.scaffold00169 590735 1 G C - ReadM SNP 0047.scaffold00169 590817 1 A T - Both INDEL 0047.scaffold00169 591216 1 A . scaffold19356 Both SNP 0047.scaffold00169 591260 1 G A scaffold19356 Both SNP 0047.scaffold00169 591265 1 A C scaffold19356 Both SNP 0047.scaffold00169 591304 1 A T scaffold19356 Both SNP 0047.scaffold00169 591593 1 A T scaffold19356 Both SNP 0047.scaffold00169 591697 1 A C scaffold19356 ReadM SNP 0047.scaffold00169 591749 1 C T - ReadM SNP 0047.scaffold00169 591979 1 A G - ReadM SNP 0047.scaffold00169 592217 1 A G - ReadM SNP 0047.scaffold00169 592324 1 C T - ReadM SNP 0047.scaffold00169 592467 1 G A - ReadM SNP 0047.scaffold00169 592649 1 C T - ReadM SNP 0047.scaffold00169 592954 1 A G - ReadM SNP 0047.scaffold00169 592985 1 T C - ReadM SNP 0047.scaffold00169 593082 1 C T - ReadM SNP 0047.scaffold00169 593175 1 C T - ReadM SNP 0047.scaffold00169 593178 1 A G - ReadM SNP 0047.scaffold00169 593271 1 A G - ReadM SNP 0047.scaffold00169 593366 1 C G - ReadM SNP 0047.scaffold00169 593568 1 A C - ReadM SNP 0047.scaffold00169 593726 1 T C - ReadM SNP 0047.scaffold00169 593761 1 C T - ReadM SNP 0047.scaffold00169 593776 1 A G - ScafM SNP 0047.scaffold00169 594058 1 G A scaffold19356 ScafM INDEL 0047.scaffold00169 594061 2 TT .. scaffold19356 ScafM INDEL 0047.scaffold00169 594064 4 TAAA .... scaffold19356 Both SNP 0047.scaffold00169 594304 1 G A scaffold19356 ScafM SNP 0047.scaffold00169 594480 1 G A scaffold19356 ScafM SNP 0047.scaffold00169 594493 1 C G scaffold19356 Both SNP 0047.scaffold00169 594924 1 A G scaffold19356 Both INDEL 0047.scaffold00169 595551 1 T . scaffold19356 ReadM SNP 0047.scaffold00169 596368 1 A G - ReadM SNP 0047.scaffold00169 596458 1 G A - ReadM SNP 0047.scaffold00169 596956 1 C A - ReadM SNP 0047.scaffold00169 597143 1 G T - ReadM SNP 0047.scaffold00169 597317 1 A G - ReadM SNP 0047.scaffold00169 598291 1 G A - ReadM SNP 0047.scaffold00169 598658 1 C T - ReadM SNP 0047.scaffold00169 598740 1 T C - ReadM SNP 0047.scaffold00169 599554 1 T C - ReadM SNP 0047.scaffold00169 600343 1 C T - ReadM SNP 0047.scaffold00169 601074 1 A G - ReadM SNP 0047.scaffold00169 601159 1 C T - ReadM SNP 0047.scaffold00169 601193 1 T A - ReadM SNP 0047.scaffold00169 601195 1 C T - ReadM SNP 0047.scaffold00169 602514 1 T G - ReadM SNP 0047.scaffold00169 602844 1 G A - ReadM SNP 0047.scaffold00169 602857 1 A G - ReadM SNP 0047.scaffold00169 603032 1 T C - ReadM SNP 0047.scaffold00169 603147 1 A T - ReadM SNP 0047.scaffold00169 603291 1 C A - ReadM SNP 0047.scaffold00169 603412 1 C T - ReadM SNP 0047.scaffold00169 603922 1 C T - ReadM SNP 0047.scaffold00169 603973 1 C G - ReadM INDEL 0047.scaffold00169 604221 1 . G - ReadM SNP 0047.scaffold00169 604869 1 A C - ReadM SNP 0047.scaffold00169 604890 1 T G - ReadM SNP 0047.scaffold00169 604991 1 C A - Both SNP 0047.scaffold00169 605340 1 C G scaffold17388 Both SNP 0047.scaffold00169 605400 1 A C scaffold17388 ScafM SNP 0047.scaffold00169 605572 1 T C scaffold14803 ScafM INDEL 0047.scaffold00169 605588 4 ...G AAAA scaffold14803 ScafM SNP 0047.scaffold00169 605597 1 C T scaffold14803 ScafM SNP 0047.scaffold00169 605619 1 A T scaffold14803 ScafM INDEL 0047.scaffold00169 605639 1 C . scaffold14803 ScafM SNP 0047.scaffold00169 605644 1 T C scaffold14803 ScafM SNP 0047.scaffold00169 605657 1 G A scaffold14803 ScafM SNP 0047.scaffold00169 605664 1 C T scaffold14803 Both SNP 0047.scaffold00169 605672 1 A C scaffold14803 ScafM SNP 0047.scaffold00169 605678 1 G T scaffold14803 ScafM SNP 0047.scaffold00169 605726 1 C A scaffold14803 ReadM SNP 0047.scaffold00169 605925 1 A T - ReadM SNP 0047.scaffold00169 606139 1 C G - ReadM SNP 0047.scaffold00169 606265 1 T A - ReadM SNP 0047.scaffold00169 606267 1 C T - ReadM SNP 0047.scaffold00169 606409 1 A C - ReadM SNP 0047.scaffold00169 606698 1 T C - ReadM SNP 0047.scaffold00169 607089 1 A G - ReadM SNP 0047.scaffold00169 607143 1 G A - ReadM SNP 0047.scaffold00169 607166 1 C T - ReadM INDEL 0047.scaffold00169 608161 3 TGT ... - ReadM SNP 0047.scaffold00169 608219 1 T A - ReadM SNP 0047.scaffold00169 609200 1 T C - ReadM SNP 0047.scaffold00169 609678 1 T C - ReadM SNP 0047.scaffold00169 609718 1 A G - ReadM SNP 0047.scaffold00169 609728 1 G A - ReadM SNP 0047.scaffold00169 609916 1 T C - ReadM SNP 0047.scaffold00169 610101 1 C T - ReadM SNP 0047.scaffold00169 610177 1 C T - ReadM SNP 0047.scaffold00169 610735 1 A C - ReadM SNP 0047.scaffold00169 610842 1 A T - ReadM SNP 0047.scaffold00169 611291 1 C G - ReadM SNP 0047.scaffold00169 611368 1 A T - ReadM SNP 0047.scaffold00169 611634 1 A G - ReadM INDEL 0047.scaffold00169 612093 1 A . - ReadM SNP 0047.scaffold00169 612330 1 T G - Both INDEL 0047.scaffold00169 612517 1 . A scaffold2042 Both SNP 0047.scaffold00169 612527 1 C T scaffold2042 Both SNP 0047.scaffold00169 612729 1 T C scaffold2042 Both SNP 0047.scaffold00169 612993 1 C T scaffold2042 ReadM SNP 0047.scaffold00169 613011 1 A C - ReadM SNP 0047.scaffold00169 613264 1 G A - Both SNP 0047.scaffold00169 613344 1 T C scaffold2042 Both SNP 0047.scaffold00169 613439 1 G A scaffold2042 Both SNP 0047.scaffold00169 613451 1 C T scaffold2042 ReadM SNP 0047.scaffold00169 613742 1 A G - ReadM SNP 0047.scaffold00169 614070 1 A C - ReadM SNP 0047.scaffold00169 614226 1 A G - ReadM SNP 0047.scaffold00169 614511 1 G A - ReadM SNP 0047.scaffold00169 614886 1 A G - ReadM SNP 0047.scaffold00169 614976 1 C T - ReadM SNP 0047.scaffold00169 615423 1 T A - ReadM SNP 0047.scaffold00169 615476 1 C T - Both SNP 0047.scaffold00169 616023 1 G A scaffold2042 Both SNP 0047.scaffold00169 616099 1 C T scaffold2042 Both SNP 0047.scaffold00169 616242 1 C A scaffold2042 Both SNP 0047.scaffold00169 616746 1 A C scaffold2042 Both SNP 0047.scaffold00169 616810 1 T C scaffold2042 ReadM SNP 0047.scaffold00169 619731 1 T C - ReadM SNP 0047.scaffold00169 619913 1 A G - ReadM SNP 0047.scaffold00169 620311 1 T C - ScafM SNP 0047.scaffold00169 620576 1 T C scaffold34520 ScafM SNP 0047.scaffold00169 620581 1 T C scaffold34520 ScafM SNP 0047.scaffold00169 620824 1 A T scaffold29380 ScafM INDEL 0047.scaffold00169 620854 1 C . scaffold29380 ScafM SNP 0047.scaffold00169 620867 1 G A scaffold29380 ScafM SNP 0047.scaffold00169 620882 2 GA TG scaffold29380 ScafM SNP 0047.scaffold00169 620900 1 T G scaffold29380 ScafM SNP 0047.scaffold00169 620902 2 GT CC scaffold29380 ScafM INDEL 0047.scaffold00169 620904 2 .. AA scaffold29380 ScafM SNP 0047.scaffold00169 621005 1 T A scaffold29380 ScafM SNP 0047.scaffold00169 621067 1 A C scaffold29380 ScafM SNP 0047.scaffold00169 621085 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621154 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621181 1 T C scaffold12256 ScafM SNP 0047.scaffold00169 621223 1 G C scaffold12256 ScafM SNP 0047.scaffold00169 621238 1 C T scaffold12256 ScafM SNP 0047.scaffold00169 621240 1 A T scaffold12256 ScafM SNP 0047.scaffold00169 621295 1 A G scaffold12256 Both SNP 0047.scaffold00169 621314 1 T A scaffold12256 Both SNP 0047.scaffold00169 621316 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621318 2 TT CA scaffold12256 ScafM SNP 0047.scaffold00169 621337 1 G T scaffold12256 ScafM SNP 0047.scaffold00169 621357 2 TG CC scaffold12256 ScafM SNP 0047.scaffold00169 621429 1 G A scaffold12256 ScafM INDEL 0047.scaffold00169 621456 11 CTAGCTGAAGC ........... scaffold12256 ScafM INDEL 0047.scaffold00169 621528 2 .. GA scaffold12256 ReadM SNP 0047.scaffold00169 621543 1 C A - ReadM SNP 0047.scaffold00169 621578 1 C T - ScafM SNP 0047.scaffold00169 621618 1 C G scaffold12256 ScafM SNP 0047.scaffold00169 621678 1 T C scaffold12256 ScafM SNP 0047.scaffold00169 621682 1 A G scaffold12256 ScafM SNP 0047.scaffold00169 621709 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621716 1 A G scaffold12256 ScafM SNP 0047.scaffold00169 621726 1 A G scaffold12256 ScafM SNP 0047.scaffold00169 621763 1 G A scaffold12256 ScafM SNP 0047.scaffold00169 621772 1 T C scaffold12256 ScafM SNP 0047.scaffold00169 621792 1 T C scaffold12256 ScafM SNP 0047.scaffold00169 621868 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621906 1 T A scaffold12256 ScafM SNP 0047.scaffold00169 621909 1 G A scaffold12256 ScafM INDEL 0047.scaffold00169 621913 1 . C scaffold12256 ScafM INDEL 0047.scaffold00169 621920 1 T . scaffold12256 ScafM SNP 0047.scaffold00169 621930 1 C T scaffold12256 ScafM SNP 0047.scaffold00169 621962 1 C T scaffold12256 ScafM SNP 0047.scaffold00169 621965 1 T A scaffold12256 ReadM SNP 0047.scaffold00169 621984 1 C T - ReadM SNP 0047.scaffold00169 621994 1 T G - ReadM INDEL 0047.scaffold00169 622141 3 GTT ... - ReadM SNP 0047.scaffold00169 622429 1 G C - ReadM SNP 0047.scaffold00169 623265 1 A T - ScafM SNP 0047.scaffold00169 624423 1 A T scaffold2042 ReadM SNP 0047.scaffold00169 624424 1 A T - ScafM SNP 0047.scaffold00169 624446 1 C T scaffold2042 ReadM SNP 0047.scaffold00169 624795 1 T A - ReadM SNP 0047.scaffold00169 624799 1 T A - ReadM SNP 0047.scaffold00169 626515 1 G A - ReadM SNP 0047.scaffold00169 626622 1 T G - ReadM SNP 0047.scaffold00169 627910 1 G T - ReadM SNP 0047.scaffold00169 627977 1 T A - ReadM SNP 0047.scaffold00169 628344 1 A G - ReadM SNP 0047.scaffold00169 628624 1 G T - ReadM SNP 0047.scaffold00169 628744 1 A G - ReadM SNP 0047.scaffold00169 629073 1 G A - ReadM SNP 0047.scaffold00169 630054 1 T G - ReadM SNP 0047.scaffold00169 630204 1 G A - ReadM SNP 0047.scaffold00169 630317 1 A T - ReadM SNP 0047.scaffold00169 630921 1 C A - ReadM SNP 0047.scaffold00169 630949 1 T C - ReadM SNP 0047.scaffold00169 631133 1 T C - ReadM SNP 0047.scaffold00169 631446 1 G A - ReadM SNP 0047.scaffold00169 631492 1 A T - ReadM SNP 0047.scaffold00169 632029 1 A G - ReadM SNP 0047.scaffold00169 633434 1 A T - ReadM SNP 0047.scaffold00169 633438 1 T C - ReadM SNP 0047.scaffold00169 633897 1 A T - ReadM SNP 0047.scaffold00169 633938 1 A G - ReadM SNP 0047.scaffold00169 634149 1 A T - ReadM SNP 0047.scaffold00169 634380 1 T A - ReadM SNP 0047.scaffold00169 634417 1 G A - ReadM SNP 0047.scaffold00169 634708 1 T A - ReadM SNP 0047.scaffold00169 635271 1 T C - ReadM SNP 0047.scaffold00169 635807 1 A T - ReadM SNP 0047.scaffold00169 636200 1 G T - ReadM SNP 0047.scaffold00169 636796 1 C T - ReadM SNP 0047.scaffold00169 636805 1 T C - ReadM SNP 0047.scaffold00169 637095 1 C T - ReadM INDEL 0047.scaffold00169 637547 1 G . - ReadM SNP 0047.scaffold00169 638063 1 T C - ReadM SNP 0047.scaffold00169 638132 1 A G - ReadM SNP 0047.scaffold00169 638446 1 T C - ReadM SNP 0047.scaffold00169 638483 1 T C - ReadM SNP 0047.scaffold00169 638806 1 A G - ReadM SNP 0047.scaffold00169 639258 1 C G - ReadM SNP 0047.scaffold00169 639320 1 T A - ReadM SNP 0047.scaffold00169 639472 1 C T - ReadM SNP 0047.scaffold00169 639522 1 A C - ReadM SNP 0047.scaffold00169 639748 1 A T - ReadM SNP 0047.scaffold00169 640646 1 G A - ReadM SNP 0047.scaffold00169 640981 1 T A - Both SNP 0047.scaffold00169 641198 1 A C scaffold2042 Both SNP 0047.scaffold00169 641279 1 A C scaffold2042 Both SNP 0047.scaffold00169 641301 1 T G scaffold2042 ReadM SNP 0047.scaffold00169 642045 1 A G - ReadM SNP 0047.scaffold00169 642274 1 G C - ReadM SNP 0047.scaffold00169 642787 1 C A - ReadM SNP 0047.scaffold00169 644021 1 G A - ReadM SNP 0047.scaffold00169 644134 1 G A - ReadM SNP 0047.scaffold00169 644285 1 T C - ReadM SNP 0047.scaffold00169 644599 1 A G - ReadM SNP 0047.scaffold00169 644727 1 T C - ReadM SNP 0047.scaffold00169 644953 1 C A - ReadM INDEL 0047.scaffold00169 645308 1 . T - ReadM SNP 0047.scaffold00169 645761 1 T A - ReadM SNP 0047.scaffold00169 646070 1 A G - ReadM SNP 0047.scaffold00169 646136 1 A G - ReadM SNP 0047.scaffold00169 646338 1 T C - ReadM SNP 0047.scaffold00169 646726 1 T C - ReadM SNP 0047.scaffold00169 646776 1 T G - ReadM SNP 0047.scaffold00169 646897 1 G T - ReadM SNP 0047.scaffold00169 647379 2 TT CC - ReadM SNP 0047.scaffold00169 647485 1 A G - ReadM SNP 0047.scaffold00169 647662 1 A C - ReadM SNP 0047.scaffold00169 647870 1 A G - ReadM SNP 0047.scaffold00169 647883 1 A T - ReadM SNP 0047.scaffold00169 648123 1 C T - ReadM SNP 0047.scaffold00169 648207 1 C T - ReadM SNP 0047.scaffold00169 648277 1 T A - ReadM SNP 0047.scaffold00169 648888 1 C G - Both SNP 0047.scaffold00169 649639 1 C T scaffold2042 Both SNP 0047.scaffold00169 649821 1 A C scaffold2042 ReadM SNP 0047.scaffold00169 650237 1 A G - ReadM SNP 0047.scaffold00169 651296 1 T C - ReadM SNP 0047.scaffold00169 651400 1 T G - ReadM SNP 0047.scaffold00169 651486 1 T G - Both SNP 0047.scaffold00169 651537 1 A T scaffold2042 Both SNP 0047.scaffold00169 651608 1 G A scaffold2042 ScafM SNP 0047.scaffold00169 652772 1 C T scaffold2042 Both SNP 0047.scaffold00169 653013 1 T C scaffold2042 ReadM SNP 0047.scaffold00169 653492 1 C T - Both SNP 0047.scaffold00169 653862 1 T C scaffold2042 ReadM SNP 0047.scaffold00169 654194 1 T C - ReadM SNP 0047.scaffold00169 654518 1 G T - ReadM SNP 0047.scaffold00169 654544 1 C T - Both SNP 0047.scaffold00169 654671 1 A G scaffold2042 ScafM SNP 0047.scaffold00169 654729 1 G T scaffold2042 ScafM INDEL 0047.scaffold00169 654736 20 .................... GAAATAGAAAGGTATAAAGA scaffold2042 ScafM INDEL 0047.scaffold00169 654769 3 ..A TCT scaffold2042 ReadM INDEL 0047.scaffold00169 654772 1 T . - ScafM INDEL 0047.scaffold00169 654775 1 . G scaffold2042 ScafM SNP 0047.scaffold00169 654786 1 C G scaffold2042 ScafM SNP 0047.scaffold00169 654789 1 T G scaffold2042 ReadM SNP 0047.scaffold00169 654801 1 G A - ScafM SNP 0047.scaffold00169 654806 4 GAAC TTTT scaffold2042 ScafM INDEL 0047.scaffold00169 654812 1 T . scaffold2042 ReadM SNP 0047.scaffold00169 655396 1 C T - ReadM SNP 0047.scaffold00169 655405 1 G T - ScafM SNP 0047.scaffold00169 655665 1 T C scaffold1101 ScafM SNP 0047.scaffold00169 655720 1 G C scaffold1101 ScafM INDEL 0047.scaffold00169 655754 1 T . scaffold1101 ScafM SNP 0047.scaffold00169 655758 1 T G scaffold1101 Both SNP 0047.scaffold00169 661473 1 T G scaffold2213 ScafM SNP 0047.scaffold00169 661621 1 C G scaffold2213 ReadM SNP 0047.scaffold00169 662533 1 T C - ReadM SNP 0047.scaffold00169 662747 1 A G - ReadM SNP 0047.scaffold00169 662954 1 G T - ReadM SNP 0047.scaffold00169 663161 1 T A - ReadM INDEL 0047.scaffold00169 663415 1 . G - ReadM SNP 0047.scaffold00169 663672 1 G A - Both SNP 0047.scaffold00169 664303 1 C T scaffold2213 Both SNP 0047.scaffold00169 664415 1 G A scaffold2213 Both SNP 0047.scaffold00169 664431 1 T A scaffold2213 ScafM SNP 0047.scaffold00169 664488 1 A C scaffold2213 ReadM SNP 0047.scaffold00169 664664 1 G T - ReadM SNP 0047.scaffold00169 666158 1 C T - ReadM SNP 0047.scaffold00169 666726 1 C T - ReadM SNP 0047.scaffold00169 667028 1 A T - ReadM SNP 0047.scaffold00169 667946 1 C T - ReadM SNP 0047.scaffold00169 668036 1 T A - ReadM SNP 0047.scaffold00169 668151 1 C T - ReadM SNP 0047.scaffold00169 668270 1 T C - ReadM SNP 0047.scaffold00169 668321 1 A T - ReadM SNP 0047.scaffold00169 669052 1 A C - ReadM SNP 0047.scaffold00169 669969 1 A T - ReadM SNP 0047.scaffold00169 669972 1 T G - ReadM SNP 0047.scaffold00169 670053 1 A G - ReadM SNP 0047.scaffold00169 670188 1 A G - ReadM SNP 0047.scaffold00169 670340 1 G T - ReadM SNP 0047.scaffold00169 670647 1 T A - ReadM SNP 0047.scaffold00169 670788 1 C T - ReadM SNP 0047.scaffold00169 671938 1 T G - ReadM INDEL 0047.scaffold00169 672205 1 T . - ReadM INDEL 0047.scaffold00169 672283 1 . T - ReadM SNP 0047.scaffold00169 672317 1 C A - ReadM SNP 0047.scaffold00169 672516 1 C A - ReadM SNP 0047.scaffold00169 672699 1 T C - ReadM SNP 0047.scaffold00169 672761 1 G A - ReadM SNP 0047.scaffold00169 673356 1 G T - ReadM SNP 0047.scaffold00169 673370 1 A G - ReadM SNP 0047.scaffold00169 673396 1 T C - ReadM SNP 0047.scaffold00169 673621 1 C T - ReadM SNP 0047.scaffold00169 673651 1 G A - ReadM SNP 0047.scaffold00169 673842 1 A G - ReadM SNP 0047.scaffold00169 674275 1 T C - ReadM SNP 0047.scaffold00169 674278 1 G T - ReadM SNP 0047.scaffold00169 674688 1 C T - ReadM SNP 0047.scaffold00169 674720 1 T C - ReadM SNP 0047.scaffold00169 675492 1 T C - ReadM SNP 0047.scaffold00169 675519 1 G A - ReadM SNP 0047.scaffold00169 675598 1 T G - ReadM SNP 0047.scaffold00169 675980 1 A T - ReadM SNP 0047.scaffold00169 676408 1 T G - ScafM SNP 0047.scaffold00169 676563 1 A C scaffold2213 ScafM INDEL 0047.scaffold00169 676565 2 .. AA scaffold2213 ScafM INDEL 0047.scaffold00169 676642 1 T . scaffold2213 Both INDEL 0047.scaffold00169 676929 1 T . scaffold2213 ReadM SNP 0047.scaffold00169 677148 1 A G - Both SNP 0047.scaffold00169 678559 1 C T scaffold2213 ReadM SNP 0047.scaffold00169 678749 1 C T - ReadM SNP 0047.scaffold00169 678829 1 G A - ReadM SNP 0047.scaffold00169 678860 1 C T - Both SNP 0047.scaffold00169 679085 1 A T scaffold2213 Both SNP 0047.scaffold00169 679097 1 A G scaffold2213 ReadM SNP 0047.scaffold00169 679312 1 A C - ReadM SNP 0047.scaffold00169 679317 1 T G - ReadM SNP 0047.scaffold00169 679482 1 A G - Both SNP 0047.scaffold00169 679559 1 G A scaffold2213 ReadM SNP 0047.scaffold00169 680189 1 G A - ReadM SNP 0047.scaffold00169 680250 1 T C - ReadM SNP 0047.scaffold00169 680320 1 C T - ReadM SNP 0047.scaffold00169 680938 1 G A - ReadM SNP 0047.scaffold00169 681087 1 G A - ReadM SNP 0047.scaffold00169 681122 1 T G - ReadM SNP 0047.scaffold00169 681318 1 A G - ReadM SNP 0047.scaffold00169 681803 1 T C - ReadM SNP 0047.scaffold00169 682153 1 C T - ReadM SNP 0047.scaffold00169 682193 1 C G - ReadM SNP 0047.scaffold00169 682258 1 A G - ReadM SNP 0047.scaffold00169 682497 1 C A - ReadM SNP 0047.scaffold00169 682647 1 C A - ReadM SNP 0047.scaffold00169 682871 1 G A - ReadM SNP 0047.scaffold00169 683078 1 T A - ReadM SNP 0047.scaffold00169 683144 1 G A - ReadM SNP 0047.scaffold00169 683174 1 A G - ReadM SNP 0047.scaffold00169 683431 1 G C - ReadM INDEL 0047.scaffold00169 683453 1 A . - ReadM SNP 0047.scaffold00169 683757 1 A G - ReadM SNP 0047.scaffold00169 683829 1 C T - ReadM SNP 0047.scaffold00169 685068 1 G T - ReadM INDEL 0047.scaffold00169 685083 2 TT .. - Both SNP 0047.scaffold00169 685369 1 A G scaffold2213 ReadM SNP 0047.scaffold00169 686174 1 A G - ReadM SNP 0047.scaffold00169 686201 1 G A - ReadM SNP 0047.scaffold00169 686205 1 G T - ReadM SNP 0047.scaffold00169 686419 1 A G - ReadM SNP 0047.scaffold00169 686579 1 T C - ReadM SNP 0047.scaffold00169 686654 1 C T - ReadM SNP 0047.scaffold00169 686673 1 C T - Both SNP 0047.scaffold00169 686693 1 T G scaffold2213 Both SNP 0047.scaffold00169 686786 1 T C scaffold2213 Both SNP 0047.scaffold00169 686838 1 C G scaffold2213 Both INDEL 0047.scaffold00169 687007 1 C . scaffold2213 Both SNP 0047.scaffold00169 688736 1 C A scaffold2213 Both SNP 0047.scaffold00169 688943 1 C T scaffold2213 ScafM SNP 0047.scaffold00169 690053 1 T C scaffold2213 Both SNP 0047.scaffold00169 690355 1 G T scaffold2213 Both SNP 0047.scaffold00169 691689 1 T C scaffold2213 Both SNP 0047.scaffold00169 692939 1 A T scaffold2213 ReadM SNP 0047.scaffold00169 693868 1 C T - ReadM SNP 0047.scaffold00169 694041 1 G A - ReadM SNP 0047.scaffold00169 694051 1 T G - ScafM INDEL 0047.scaffold00169 694642 1 A . scaffold2213 ScafM INDEL 0047.scaffold00169 694669 17 ................. ATTGCAGTTGCTTAAGA scaffold2213 ScafM SNP 0047.scaffold00169 694701 1 C G scaffold2213 ScafM SNP 0047.scaffold00169 694705 1 T G scaffold2213 ScafM SNP 0047.scaffold00169 694763 1 A G scaffold2213 ScafM INDEL 0047.scaffold00169 694775 24 TTGTAGTAAAAAGATAAATTCAGG ........................ scaffold2213 ScafM INDEL 0047.scaffold00169 694855 1 A . scaffold2213 Both INDEL 0047.scaffold00169 694917 1 . A scaffold2213 ScafM SNP 0047.scaffold00169 695003 1 A T scaffold2213 ScafM INDEL 0047.scaffold00169 695459 2 AT .. scaffold2213 ScafM SNP 0047.scaffold00169 699088 1 A C scaffold2213 Both SNP 0047.scaffold00169 699479 1 T C scaffold2213 ReadM INDEL 0047.scaffold00169 699504 1 G . - Both SNP 0047.scaffold00169 700260 1 C T scaffold2213 Both SNP 0047.scaffold00169 700438 1 G T scaffold2213 Both SNP 0047.scaffold00169 700501 1 T C scaffold2213 Both SNP 0047.scaffold00169 700590 1 C T scaffold2213 Both SNP 0047.scaffold00169 700626 1 A C scaffold2213 ReadM INDEL 0047.scaffold00169 702455 1 . T - ReadM SNP 0047.scaffold00169 702538 1 C T - ReadM SNP 0047.scaffold00169 703570 1 G A - ReadM SNP 0047.scaffold00169 704169 1 A T - ReadM SNP 0047.scaffold00169 705762 1 T G - ReadM SNP 0047.scaffold00169 714534 1 C T - ReadM SNP 0047.scaffold00169 714652 1 T C - ReadM SNP 0047.scaffold00169 714910 1 G A - ReadM SNP 0047.scaffold00169 715197 1 A T - ReadM SNP 0047.scaffold00169 715316 1 G A - ReadM SNP 0047.scaffold00169 715375 1 T A - ReadM SNP 0047.scaffold00169 715398 1 A G - ReadM SNP 0047.scaffold00169 715569 1 C T - ReadM SNP 0047.scaffold00169 715716 1 T A - ReadM SNP 0047.scaffold00169 715762 1 A G - ReadM SNP 0047.scaffold00169 715873 1 G T - ReadM SNP 0047.scaffold00169 715925 1 C T - ReadM SNP 0047.scaffold00169 715985 1 C A - ReadM SNP 0047.scaffold00169 716830 1 G A - ReadM SNP 0047.scaffold00169 716889 1 A G - ReadM SNP 0047.scaffold00169 717138 1 A G - ScafM SNP 0047.scaffold00169 718271 1 T A scaffold7618 ScafM SNP 0047.scaffold00169 718276 1 C T scaffold7618 ScafM SNP 0047.scaffold00169 718314 1 C T scaffold7618 ScafM INDEL 0047.scaffold00169 718344 2 TT .. scaffold7618 ReadM SNP 0047.scaffold00169 726296 1 A T - ReadM SNP 0047.scaffold00169 726574 1 A G - ReadM INDEL 0047.scaffold00169 726735 1 . T - ReadM SNP 0047.scaffold00169 726886 1 T C - ReadM SNP 0047.scaffold00169 726917 1 T G - ReadM SNP 0047.scaffold00169 726931 1 C A - ReadM INDEL 0047.scaffold00169 727055 1 G . - ReadM SNP 0047.scaffold00169 727289 1 T C - ReadM SNP 0047.scaffold00169 727359 1 C A - Both SNP 0047.scaffold00169 727445 1 T A scaffold20442 Both SNP 0047.scaffold00169 727623 1 C T scaffold20442 ReadM SNP 0047.scaffold00169 727962 1 T C - ReadM SNP 0047.scaffold00169 728020 2 CC TT - ReadM SNP 0047.scaffold00169 728035 1 C T - ReadM SNP 0047.scaffold00169 728230 1 G A - ReadM SNP 0047.scaffold00169 728987 1 T G - ReadM SNP 0047.scaffold00169 729473 1 A T - ReadM SNP 0047.scaffold00169 730081 1 C A - ReadM SNP 0047.scaffold00169 730722 1 T C - ReadM SNP 0047.scaffold00169 730984 1 C T - ReadM SNP 0047.scaffold00169 731011 1 A G - ReadM SNP 0047.scaffold00169 731432 1 C T - ReadM SNP 0047.scaffold00169 731716 1 A C - ReadM INDEL 0047.scaffold00169 732295 1 . T - Both SNP 0047.scaffold00169 733116 1 C T scaffold20442 Both SNP 0047.scaffold00169 733330 1 T A scaffold20442 Both SNP 0047.scaffold00169 733875 1 G A scaffold20442 Both SNP 0047.scaffold00169 734132 1 A T scaffold20442 Both INDEL 0047.scaffold00169 734736 1 . G scaffold20442 ScafM SNP 0047.scaffold00169 735197 1 T C scaffold20442 Both SNP 0047.scaffold00169 735235 1 T C scaffold20442 Both INDEL 0047.scaffold00169 735449 1 . T scaffold20442 Both SNP 0047.scaffold00169 735507 1 G A scaffold20442 ScafM INDEL 0047.scaffold00169 735533 13 ............. TATTTGGTTTTTT scaffold20442 ReadM INDEL 0047.scaffold00169 735575 1 . T - Both SNP 0047.scaffold00169 735602 1 C T scaffold20442 Both SNP 0047.scaffold00169 735637 1 T A scaffold20442 ScafM SNP 0047.scaffold00169 735759 3 GTA AAC scaffold20442 ScafM SNP 0047.scaffold00169 735775 1 T G scaffold20442 Both SNP 0047.scaffold00169 735831 1 A G scaffold20442 Both SNP 0047.scaffold00169 735842 1 G C scaffold20442 ScafM INDEL 0047.scaffold00169 736301 47 AGCCACGTGCCACCATCCTAAGGTGATGTCTTCTGTTTTGGCAAGTA ............................................... scaffold20442 ScafM INDEL 0047.scaffold00169 736350 20 AAGGTTGCATTTTTTTTTGC .................... scaffold20442 ReadM SNP 0047.scaffold00169 737412 1 T C - ReadM SNP 0047.scaffold00169 737527 1 T C - ReadM SNP 0047.scaffold00169 737583 1 C T - ReadM SNP 0047.scaffold00169 737616 1 G T - ReadM INDEL 0047.scaffold00169 737824 1 . T - ReadM SNP 0047.scaffold00169 737902 1 A G - ReadM SNP 0047.scaffold00169 738010 1 G A - ReadM SNP 0047.scaffold00169 739684 1 C T - ReadM SNP 0047.scaffold00169 739958 1 C G - ReadM SNP 0047.scaffold00169 739963 1 G T - ReadM SNP 0047.scaffold00169 739981 1 G A - ReadM SNP 0047.scaffold00169 739991 1 T C - ReadM SNP 0047.scaffold00169 740022 1 T G - ReadM SNP 0047.scaffold00169 740607 1 C A - ReadM SNP 0047.scaffold00169 740642 1 A G - ReadM SNP 0047.scaffold00169 740658 1 T C - ReadM SNP 0047.scaffold00169 740827 1 G A - ReadM SNP 0047.scaffold00169 740911 1 C A - ReadM SNP 0047.scaffold00169 741112 1 T G - ReadM SNP 0047.scaffold00169 741313 1 A C - ReadM SNP 0047.scaffold00169 741639 1 T C - ReadM SNP 0047.scaffold00169 741844 1 G A - ReadM SNP 0047.scaffold00169 741856 1 G A - Both SNP 0047.scaffold00169 742036 1 A T scaffold20442 ReadM SNP 0047.scaffold00169 742052 1 G C - ReadM SNP 0047.scaffold00169 743257 1 T C - ReadM SNP 0047.scaffold00169 743810 1 A C - ReadM SNP 0047.scaffold00169 743836 1 A G - ReadM SNP 0047.scaffold00169 743988 1 T C - ReadM SNP 0047.scaffold00169 744204 1 G A - ReadM SNP 0047.scaffold00169 744251 1 A G - ReadM SNP 0047.scaffold00169 745048 1 G A - ReadM SNP 0047.scaffold00169 745622 1 G A - ReadM SNP 0047.scaffold00169 745663 1 A G - ReadM SNP 0047.scaffold00169 745698 1 C T - ReadM SNP 0047.scaffold00169 746124 1 A G - ReadM SNP 0047.scaffold00169 746148 1 T C - ReadM SNP 0047.scaffold00169 746585 1 A G - ReadM SNP 0047.scaffold00169 747015 1 G A - ReadM INDEL 0047.scaffold00169 747099 1 T . - ReadM SNP 0047.scaffold00169 747232 1 C T - ReadM SNP 0047.scaffold00169 747467 1 C A - ReadM SNP 0047.scaffold00169 747667 1 T G - Both SNP 0047.scaffold00169 748109 1 C G scaffold20442 Both SNP 0047.scaffold00169 748212 1 T C scaffold20442 Both SNP 0047.scaffold00169 748573 1 G A scaffold20442 ReadM SNP 0047.scaffold00169 749223 1 A G - ReadM SNP 0047.scaffold00169 749440 1 T C - ReadM SNP 0047.scaffold00169 749453 1 T C - ReadM SNP 0047.scaffold00169 749489 1 C T - ReadM SNP 0047.scaffold00169 749790 1 A C - ReadM SNP 0047.scaffold00169 750251 1 A C - Both SNP 0047.scaffold00169 750442 1 A G scaffold20442 ReadM SNP 0047.scaffold00169 754337 1 G A - ReadM SNP 0047.scaffold00169 754911 1 G A - ReadM SNP 0047.scaffold00169 754969 1 A G - ScafM SNP 0047.scaffold00169 755058 1 C A scaffold20442 ScafM INDEL 0047.scaffold00169 755063 22 ATAAAATCATGTCATGAGAATA ...................... scaffold20442 ScafM INDEL 0047.scaffold00169 755169 1 . A scaffold20442 ScafM INDEL 0047.scaffold00169 755179 1 . T scaffold20442 ReadM SNP 0047.scaffold00169 755316 1 C A - ReadM SNP 0047.scaffold00169 755872 1 G A - ReadM SNP 0047.scaffold00169 756148 1 A G - ReadM SNP 0047.scaffold00169 756251 1 C T - ReadM SNP 0047.scaffold00169 756256 1 G T - ReadM SNP 0047.scaffold00169 756608 1 T C - Both SNP 0047.scaffold00169 757302 1 A G scaffold20442 ReadM SNP 0047.scaffold00169 757779 1 G A - ReadM SNP 0047.scaffold00169 757812 1 C T - ReadM INDEL 0047.scaffold00169 758082 1 . T - ReadM INDEL 0047.scaffold00169 758531 2 AG .. - ReadM SNP 0047.scaffold00169 758900 1 G T - ReadM SNP 0047.scaffold00169 759158 1 C A - Both SNP 0047.scaffold00169 759359 1 A T scaffold20442 Both SNP 0047.scaffold00169 759428 1 T A scaffold20442 Both SNP 0047.scaffold00169 759864 1 C T scaffold20442 Both SNP 0047.scaffold00169 759875 1 T C scaffold20442 ScafM SNP 0047.scaffold00169 760170 1 A G scaffold20442 ReadM SNP 0047.scaffold00169 760328 1 G A - ReadM SNP 0047.scaffold00169 761293 1 A C - ReadM SNP 0047.scaffold00169 761322 1 G A - ReadM SNP 0047.scaffold00169 761372 1 C T - ReadM SNP 0047.scaffold00169 761819 1 C T - Both SNP 0047.scaffold00169 762405 1 A T scaffold20442 Both SNP 0047.scaffold00169 762699 1 C T scaffold20442 Both SNP 0047.scaffold00169 763274 1 G A scaffold20442 Both INDEL 0047.scaffold00169 763367 1 G . scaffold20442 Both SNP 0047.scaffold00169 763469 1 C T scaffold20442 Both SNP 0047.scaffold00169 763883 1 T A scaffold20442 Both SNP 0047.scaffold00169 764116 1 A T scaffold20442 Both SNP 0047.scaffold00169 764277 1 T C scaffold20442 Both SNP 0047.scaffold00169 764966 1 A G scaffold20442 Both SNP 0047.scaffold00169 765323 1 A G scaffold20442 Both SNP 0047.scaffold00169 765430 1 A T scaffold20442 Both SNP 0047.scaffold00169 765812 1 T C scaffold20442 Both SNP 0047.scaffold00169 766023 1 C T scaffold20442 Both SNP 0047.scaffold00169 766433 1 C A scaffold20442 Both SNP 0047.scaffold00169 768212 1 C T scaffold20442 ReadM SNP 0047.scaffold00169 768714 1 T G - Both SNP 0047.scaffold00169 768765 1 G A scaffold20442 Both SNP 0047.scaffold00169 768779 1 C A scaffold20442 Both SNP 0047.scaffold00169 768888 1 C T scaffold20442 ReadM SNP 0047.scaffold00169 769061 1 C A - ReadM SNP 0047.scaffold00169 769289 1 T C - ReadM SNP 0047.scaffold00169 769295 1 T C - ReadM SNP 0047.scaffold00169 769612 1 C T - Both SNP 0047.scaffold00169 775463 1 T C scaffold10283 ReadM SNP 0047.scaffold00169 775490 1 T C - ReadM SNP 0047.scaffold00169 775649 1 G A - Both SNP 0047.scaffold00169 775781 1 G A scaffold10283 Both SNP 0047.scaffold00169 775783 1 G A scaffold10283 Both INDEL 0047.scaffold00169 775803 1 T . scaffold10283 ReadM SNP 0047.scaffold00169 775979 1 T A - ReadM SNP 0047.scaffold00169 776176 1 C T - Both SNP 0047.scaffold00169 776461 1 T A scaffold10283 ReadM SNP 0047.scaffold00169 776666 1 A T - ReadM SNP 0047.scaffold00169 776801 1 C A - ReadM SNP 0047.scaffold00169 777000 1 C T - Both SNP 0047.scaffold00169 777212 1 C T scaffold10283 ReadM SNP 0047.scaffold00169 777279 1 G A - ReadM SNP 0047.scaffold00169 777607 1 C T - ReadM SNP 0047.scaffold00169 777787 1 A C - ReadM SNP 0047.scaffold00169 777988 1 A G - ScafM INDEL 0047.scaffold00169 778264 2 TT .. scaffold10283 Both SNP 0047.scaffold00169 778564 1 T A scaffold10283 ScafM SNP 0047.scaffold00169 778621 2 TA CT scaffold10283 Both SNP 0047.scaffold00169 778762 1 A G scaffold10283 Both SNP 0047.scaffold00169 778833 1 T G scaffold10283 Both SNP 0047.scaffold00169 779056 1 C T scaffold10283 Both SNP 0047.scaffold00169 779250 1 C G scaffold10283 Both SNP 0047.scaffold00169 779484 1 A G scaffold10283 Both SNP 0047.scaffold00169 779946 1 C A scaffold10283 ScafM INDEL 0047.scaffold00169 779968 2 .. AA scaffold10283 ScafM SNP 0047.scaffold00169 779985 1 C T scaffold10283 Both SNP 0047.scaffold00169 780032 1 C T scaffold10283 Both INDEL 0047.scaffold00169 780052 1 . A scaffold10283 Both SNP 0047.scaffold00169 780539 1 G A scaffold10283 Both SNP 0047.scaffold00169 780753 1 G T scaffold10283 Both SNP 0047.scaffold00169 780824 1 T C scaffold10283 Both SNP 0047.scaffold00169 781742 1 T G scaffold10283 ReadM SNP 0047.scaffold00169 785140 1 C T - ReadM SNP 0047.scaffold00169 785316 1 A G - ReadM SNP 0047.scaffold00169 785454 1 A C - ReadM SNP 0047.scaffold00169 785612 1 A G - ReadM SNP 0047.scaffold00169 785658 1 A C - ReadM SNP 0047.scaffold00169 785661 1 T C - ReadM SNP 0047.scaffold00169 785723 1 C T - ReadM SNP 0047.scaffold00169 785884 1 T A - ReadM SNP 0047.scaffold00169 786079 1 T A - ReadM SNP 0047.scaffold00169 786795 1 G A - ReadM SNP 0047.scaffold00169 786860 1 A G - ReadM SNP 0047.scaffold00169 786980 1 G C - ReadM SNP 0047.scaffold00169 787053 1 C T - ReadM SNP 0047.scaffold00169 787445 1 T C - ReadM SNP 0047.scaffold00169 787451 1 C G - ReadM SNP 0047.scaffold00169 787537 1 G A - ReadM SNP 0047.scaffold00169 788100 1 C G - ReadM SNP 0047.scaffold00169 788529 1 A T - ReadM SNP 0047.scaffold00169 788954 1 G A - ReadM SNP 0047.scaffold00169 789087 1 T C - ReadM SNP 0047.scaffold00169 789403 1 C G - ReadM SNP 0047.scaffold00169 790170 1 A G - ReadM SNP 0047.scaffold00169 790215 1 T C - ReadM SNP 0047.scaffold00169 790887 1 G A - ReadM SNP 0047.scaffold00169 790983 1 A G - ReadM SNP 0047.scaffold00169 791231 1 A G - ReadM SNP 0047.scaffold00169 791298 1 G T - ReadM SNP 0047.scaffold00169 791485 1 T G - ReadM SNP 0047.scaffold00169 791494 1 G A - ReadM INDEL 0047.scaffold00169 791626 1 T . - ReadM INDEL 0047.scaffold00169 791819 1 T . - ReadM SNP 0047.scaffold00169 793119 1 A C - ReadM SNP 0047.scaffold00169 793136 1 G T - ReadM SNP 0047.scaffold00169 793376 1 A G - ReadM SNP 0047.scaffold00169 793439 1 T C - ReadM SNP 0047.scaffold00169 793611 1 A G - ReadM SNP 0047.scaffold00169 793755 1 T C - ReadM SNP 0047.scaffold00169 793970 1 A G - ReadM SNP 0047.scaffold00169 794594 1 C T - ReadM SNP 0047.scaffold00169 794805 1 G A - ReadM SNP 0047.scaffold00169 794893 1 G A - ReadM SNP 0047.scaffold00169 794966 1 C A - ReadM SNP 0047.scaffold00169 795112 1 T G - ReadM SNP 0047.scaffold00169 795120 1 G A - ReadM SNP 0047.scaffold00169 795157 1 C T - ReadM SNP 0047.scaffold00169 795264 1 T C - ReadM SNP 0047.scaffold00169 795300 1 C G - ReadM SNP 0047.scaffold00169 795331 1 A C - ReadM SNP 0047.scaffold00169 795369 1 A T - ReadM SNP 0047.scaffold00169 795402 1 A G - ReadM SNP 0047.scaffold00169 795452 1 C A - ReadM SNP 0047.scaffold00169 795566 1 G A - ReadM SNP 0047.scaffold00169 795641 1 T C - ReadM SNP 0047.scaffold00169 795720 1 T C - ReadM SNP 0047.scaffold00169 795844 1 C T - ReadM SNP 0047.scaffold00169 795908 1 G A - ReadM SNP 0047.scaffold00169 795954 1 A C - ReadM SNP 0047.scaffold00169 796052 1 T C - ReadM SNP 0047.scaffold00169 796254 1 A G - ReadM SNP 0047.scaffold00169 796360 1 A G - ReadM SNP 0047.scaffold00169 796701 1 G T - ReadM SNP 0047.scaffold00169 796930 1 T G - ReadM SNP 0047.scaffold00169 797261 1 C T - ReadM SNP 0047.scaffold00169 797285 1 C A - ReadM SNP 0047.scaffold00169 797907 1 C T - ReadM SNP 0047.scaffold00169 797921 1 G A - ReadM SNP 0047.scaffold00169 798182 1 A G - ReadM SNP 0047.scaffold00169 798287 1 A T - ScafM INDEL 0047.scaffold00169 798759 8 ........ GAATTCAT scaffold10283 ReadM SNP 0047.scaffold00169 798986 1 G A - Both INDEL 0047.scaffold00169 799446 1 . T scaffold10283 Both SNP 0047.scaffold00169 799759 1 C T scaffold10283 Both SNP 0047.scaffold00169 800154 1 G A scaffold10283 ReadM INDEL 0047.scaffold00169 800180 1 . C - ReadM INDEL 0047.scaffold00169 800315 1 . A - Both SNP 0047.scaffold00169 800705 1 C G scaffold10283 Both SNP 0047.scaffold00169 800837 1 G A scaffold10283 Both SNP 0047.scaffold00169 801158 1 T G scaffold10283 Both INDEL 0047.scaffold00169 801193 1 T . scaffold10283 ReadM SNP 0047.scaffold00169 801651 1 A T - Both SNP 0047.scaffold00169 801833 1 G A scaffold10283 Both SNP 0047.scaffold00169 802171 1 A T scaffold10283 ReadM SNP 0047.scaffold00169 802359 1 C T - ReadM SNP 0047.scaffold00169 802442 1 T C - Both SNP 0047.scaffold00169 802870 1 A G scaffold10283 ReadM SNP 0047.scaffold00169 802987 1 A G - ReadM SNP 0047.scaffold00169 803171 1 C T - ReadM SNP 0047.scaffold00169 803632 1 C T - ReadM SNP 0047.scaffold00169 803882 1 C A - ReadM SNP 0047.scaffold00169 804041 1 T C - ScafM SNP 0047.scaffold00169 804262 1 C A scaffold15849 ScafM SNP 0047.scaffold00169 804264 1 T A scaffold15849 ReadM SNP 0047.scaffold00169 804270 1 C T - ReadM SNP 0047.scaffold00169 804277 1 A G - ReadM SNP 0047.scaffold00169 804418 1 G A - ReadM SNP 0047.scaffold00169 804435 1 C T - ReadM SNP 0047.scaffold00169 804481 1 G A - ReadM SNP 0047.scaffold00169 805436 1 T G - ReadM INDEL 0047.scaffold00169 805665 1 . C - ReadM SNP 0047.scaffold00169 805731 1 A T - ReadM SNP 0047.scaffold00169 806074 1 T C - ReadM SNP 0047.scaffold00169 806172 1 G C - ReadM SNP 0047.scaffold00169 806350 1 C T - Both SNP 0047.scaffold00169 806406 1 T G scaffold10283 ScafM SNP 0047.scaffold00169 807197 1 A G scaffold10283 ScafM SNP 0047.scaffold00169 807222 1 T C scaffold10283 ReadM SNP 0047.scaffold00169 807313 1 C T - ReadM SNP 0047.scaffold00169 807322 1 T C - ReadM SNP 0047.scaffold00169 807629 1 G A - Both SNP 0047.scaffold00169 808042 1 A G scaffold10283 Both SNP 0047.scaffold00169 808096 1 G A scaffold10283 ReadM SNP 0047.scaffold00169 808221 1 A G - ReadM SNP 0047.scaffold00169 808459 1 C T - ReadM SNP 0047.scaffold00169 808493 1 C T - ReadM SNP 0047.scaffold00169 808579 1 G A - ReadM SNP 0047.scaffold00169 808815 1 A G - ReadM SNP 0047.scaffold00169 808984 1 A C - ReadM SNP 0047.scaffold00169 809053 1 C T - ReadM SNP 0047.scaffold00169 809646 1 A T - ReadM SNP 0047.scaffold00169 810360 1 G A - Both SNP 0047.scaffold00169 810788 1 G C scaffold10283 Both SNP 0047.scaffold00169 810869 1 G A scaffold10283 Both SNP 0047.scaffold00169 811551 1 A G scaffold10283 Both SNP 0047.scaffold00169 811896 1 T C scaffold10283 Both SNP 0047.scaffold00169 812391 1 C G scaffold10283 Both SNP 0047.scaffold00169 812433 1 G A scaffold10283 Both SNP 0047.scaffold00169 812517 1 A T scaffold10283 Both SNP 0047.scaffold00169 812616 1 G T scaffold10283 ReadM SNP 0047.scaffold00169 813342 1 A T - ReadM SNP 0047.scaffold00169 813356 1 C A - ReadM SNP 0047.scaffold00169 813489 1 G T - Both SNP 0047.scaffold00169 813601 1 T G scaffold10283 Both SNP 0047.scaffold00169 813616 1 T A scaffold10283 ReadM SNP 0047.scaffold00169 814024 1 T C - ReadM SNP 0047.scaffold00169 814038 1 T C - ReadM SNP 0047.scaffold00169 814141 1 G A - ReadM SNP 0047.scaffold00169 814172 1 C T - ReadM SNP 0047.scaffold00169 814507 1 C T - ReadM SNP 0047.scaffold00169 815309 1 A C - ReadM SNP 0047.scaffold00169 815500 1 C A - ReadM SNP 0047.scaffold00169 815536 1 A G - ReadM SNP 0047.scaffold00169 815634 1 G A - ReadM SNP 0047.scaffold00169 815670 1 C G - ReadM INDEL 0047.scaffold00169 815856 1 A . - ReadM SNP 0047.scaffold00169 816629 1 T C - ReadM SNP 0047.scaffold00169 816773 1 T C - ReadM SNP 0047.scaffold00169 817192 1 G A - ReadM SNP 0047.scaffold00169 817513 1 C T - ReadM SNP 0047.scaffold00169 817634 1 G A - ReadM SNP 0047.scaffold00169 817671 1 G A - ReadM SNP 0047.scaffold00169 819121 1 A G - ReadM SNP 0047.scaffold00169 819391 1 G A - ReadM SNP 0047.scaffold00169 819467 1 T A - ReadM SNP 0047.scaffold00169 819637 1 A G - ReadM SNP 0047.scaffold00169 820167 1 A C - ReadM SNP 0047.scaffold00169 820261 1 C T - ReadM SNP 0047.scaffold00169 820311 1 T C - ReadM SNP 0047.scaffold00169 820569 1 G T - ReadM SNP 0047.scaffold00169 820710 1 G A - ReadM SNP 0047.scaffold00169 821056 1 A G - ReadM SNP 0047.scaffold00169 821140 1 C A - ReadM SNP 0047.scaffold00169 830357 1 C T - ReadM SNP 0047.scaffold00169 830525 1 A C - ReadM SNP 0047.scaffold00169 830570 1 T C - ReadM SNP 0047.scaffold00169 830576 1 T C - ReadM SNP 0047.scaffold00169 834150 1 T G - ReadM SNP 0047.scaffold00169 834434 1 G A - ReadM SNP 0047.scaffold00169 834471 1 C T - ReadM SNP 0047.scaffold00169 834683 1 C T - ReadM SNP 0047.scaffold00169 835557 1 T C - ReadM SNP 0047.scaffold00169 835825 1 C T - ReadM INDEL 0047.scaffold00169 836191 1 T . - ReadM SNP 0047.scaffold00169 837000 1 G A - ReadM SNP 0047.scaffold00169 837435 1 T C - ReadM SNP 0047.scaffold00169 837776 1 C T - ReadM SNP 0047.scaffold00169 837848 1 T C - ReadM SNP 0047.scaffold00169 837908 1 A G - ReadM SNP 0047.scaffold00169 840358 1 T C - ReadM SNP 0047.scaffold00169 840705 1 T A - ReadM SNP 0047.scaffold00169 846198 1 A C - ReadM INDEL 0047.scaffold00169 846287 1 A . - ReadM SNP 0047.scaffold00169 846437 1 T A - ReadM SNP 0047.scaffold00169 847410 1 T C - ReadM INDEL 0047.scaffold00169 847434 1 A . - ReadM SNP 0047.scaffold00169 847982 1 T A - ReadM SNP 0047.scaffold00169 848031 1 C T - ReadM SNP 0047.scaffold00169 848037 1 G A - ReadM INDEL 0047.scaffold00169 848133 1 . A - ReadM SNP 0047.scaffold00169 848263 1 A G - ScafM SNP 0047.scaffold00169 850357 1 A C scaffold9182 ScafM SNP 0047.scaffold00169 850470 1 G A scaffold9182 ScafM SNP 0047.scaffold00169 850472 1 G A scaffold9182 Both SNP 0047.scaffold00169 853401 1 T G scaffold9182 Both SNP 0047.scaffold00169 853596 1 T C scaffold9182 Both SNP 0047.scaffold00169 853768 1 G A scaffold9182 ReadM SNP 0047.scaffold00169 854086 1 T G - ScafM INDEL 0047.scaffold00169 854660 1 . C scaffold16693 Both SNP 0047.scaffold00169 855059 1 T C scaffold16693 Both INDEL 0047.scaffold00169 855060 1 . T scaffold16693 ScafM SNP 0047.scaffold00169 855954 1 A G scaffold16693 Both INDEL 0047.scaffold00169 856478 1 A . C13472791 Both SNP 0047.scaffold00169 856683 1 T C C13472791 Both SNP 0047.scaffold00169 856866 1 C A C13472791 Both SNP 0047.scaffold00169 856870 1 G A C13472791 Both SNP 0047.scaffold00169 856878 1 T C C13472791 ScafM INDEL 0047.scaffold00169 857576 4 AATC .... C13472791 ScafM SNP 0047.scaffold00169 858062 1 C T C13566785 Both INDEL 0047.scaffold00169 858547 1 T . C13566785 Both SNP 0047.scaffold00169 858698 1 A C C13566785 ScafM SNP 0047.scaffold00169 859065 1 T C C13566785 Both SNP 0047.scaffold00169 860089 1 G A C13566785 Both SNP 0047.scaffold00169 860302 1 T G C13566785 Both INDEL 0047.scaffold00169 860401 1 . A C13566785 Both SNP 0047.scaffold00169 861129 1 C T C13566785 Both SNP 0047.scaffold00169 861370 1 C T C13566785 ScafM SNP 0047.scaffold00169 862379 1 A G C13566785 ReadM SNP 0047.scaffold00169 863978 1 A G - ReadM SNP 0047.scaffold00169 864651 1 A G - ReadM SNP 0047.scaffold00169 864754 1 G T - ReadM SNP 0047.scaffold00169 864844 1 T A - ReadM SNP 0047.scaffold00169 865104 1 C T - ScafM SNP 0047.scaffold00169 865766 1 T C scaffold19337 ScafM SNP 0047.scaffold00169 865768 1 T C scaffold19337 ScafM SNP 0047.scaffold00169 866166 1 C T scaffold19337 ScafM SNP 0047.scaffold00169 866318 1 A G scaffold19337 Both SNP 0047.scaffold00169 866497 1 A C scaffold19337 ScafM INDEL 0047.scaffold00169 867237 1 . T scaffold19337 Both SNP 0047.scaffold00169 868814 1 G A scaffold19337 ScafM SNP 0047.scaffold00169 869680 2 GG TT scaffold19337 ScafM SNP 0047.scaffold00169 869695 1 T C scaffold19337 ScafM SNP 0047.scaffold00169 869730 1 G A scaffold19337 Both INDEL 0047.scaffold00169 869823 1 . T scaffold19337 Both SNP 0047.scaffold00169 869879 1 C G scaffold19337 ScafM SNP 0047.scaffold00169 871221 1 A G scaffold19337 Both SNP 0047.scaffold00169 871296 1 T C scaffold19337 Both SNP 0047.scaffold00169 871367 1 A T scaffold19337 Both SNP 0047.scaffold00169 871461 1 A G scaffold19337 ReadM SNP 0047.scaffold00169 871841 1 T A - ReadM SNP 0047.scaffold00169 872206 1 G A - ReadM SNP 0047.scaffold00169 872503 1 T C - Both SNP 0047.scaffold00169 873073 1 C G scaffold19337 Both SNP 0047.scaffold00169 873203 1 T G scaffold19337 ScafM INDEL 0047.scaffold00169 873486 1 . C scaffold19337 ScafM INDEL 0047.scaffold00169 873488 12 ............ CCCCCCCCCCCC scaffold19337 ScafM INDEL 0047.scaffold00169 873491 3 ... AAA scaffold19337 ScafM INDEL 0047.scaffold00169 874293 3 ... GGG scaffold19337 ReadM SNP 0047.scaffold00169 874610 1 A G - ReadM SNP 0047.scaffold00169 874728 1 A C - ReadM SNP 0047.scaffold00169 874738 1 A C - Both SNP 0047.scaffold00169 874883 1 T C scaffold19337 ScafM INDEL 0047.scaffold00169 874951 1 . T scaffold19337 Both SNP 0047.scaffold00169 875294 1 A C scaffold19337 ScafM INDEL 0047.scaffold00169 875324 3 TGT ... scaffold19337 Both SNP 0047.scaffold00169 875365 1 A T scaffold19337 ReadM SNP 0047.scaffold00169 875589 1 T A - ReadM SNP 0047.scaffold00169 875779 1 A G - ReadM SNP 0047.scaffold00169 875922 1 C T - ReadM INDEL 0047.scaffold00169 877027 2 .. AT - ReadM SNP 0047.scaffold00169 877310 1 G A - Both SNP 0047.scaffold00169 877550 1 A T scaffold19337 Both SNP 0047.scaffold00169 877684 1 A G scaffold19337 ScafM SNP 0047.scaffold00169 877930 2 TA GC scaffold19337 Both SNP 0047.scaffold00169 878105 1 T C scaffold19337 ReadM SNP 0047.scaffold00169 878154 1 A T - ReadM SNP 0047.scaffold00169 878734 1 T A - ReadM SNP 0047.scaffold00169 878798 1 T C - ReadM SNP 0047.scaffold00169 878846 1 T C - Both INDEL 0047.scaffold00169 879118 1 A . scaffold19337 ReadM SNP 0047.scaffold00169 879294 1 T C - ReadM SNP 0047.scaffold00169 879360 1 A G - ReadM SNP 0047.scaffold00169 879371 1 G C - ReadM SNP 0047.scaffold00169 879455 1 A G - Both SNP 0047.scaffold00169 879759 1 T C scaffold19337 Both SNP 0047.scaffold00169 879841 1 C T scaffold19337 Both SNP 0047.scaffold00169 879847 1 C T scaffold19337 Both SNP 0047.scaffold00169 879852 1 T C scaffold19337 ReadM SNP 0047.scaffold00169 880357 1 C T - ReadM SNP 0047.scaffold00169 881283 1 A G - Both SNP 0047.scaffold00169 881516 1 A T scaffold19337 ScafM SNP 0047.scaffold00169 881899 1 T A scaffold19337 Both SNP 0047.scaffold00169 882153 1 A C scaffold19337 Both SNP 0047.scaffold00169 882855 1 A G scaffold19337 Both SNP 0047.scaffold00169 882891 1 G A scaffold19337 Both SNP 0047.scaffold00169 883452 1 G T scaffold19337 ReadM SNP 0047.scaffold00169 883858 1 T C - ReadM SNP 0047.scaffold00169 884034 1 T G - Both SNP 0047.scaffold00169 884357 1 G A scaffold19337 Both SNP 0047.scaffold00169 885392 1 G T scaffold19337 Both SNP 0047.scaffold00169 885545 1 A G scaffold19337 Both SNP 0047.scaffold00169 885738 1 T C scaffold19337 Both SNP 0047.scaffold00169 885804 1 A G scaffold19337 ReadM SNP 0047.scaffold00169 886733 1 C T - Both SNP 0047.scaffold00169 887182 1 T A scaffold19337 Both SNP 0047.scaffold00169 887196 1 T C scaffold19337 Both SNP 0047.scaffold00169 887361 1 A T scaffold19337 Both INDEL 0047.scaffold00169 887384 2 TG .. scaffold19337 ScafM SNP 0047.scaffold00169 887498 1 C T scaffold19337 ScafM INDEL 0047.scaffold00169 888690 2 .. CT scaffold19337 Both SNP 0047.scaffold00169 888968 1 G T scaffold19337 Both SNP 0047.scaffold00169 889372 1 C T scaffold19337 ScafM SNP 0047.scaffold00169 890316 1 G A scaffold19337 ScafM SNP 0047.scaffold00169 890342 1 A T scaffold19337 ReadM SNP 0047.scaffold00169 891604 1 A T - ReadM SNP 0047.scaffold00169 892776 2 AC GT - ReadM SNP 0047.scaffold00169 893383 1 T A - Both SNP 0047.scaffold00169 893478 1 T C scaffold19337 ReadM SNP 0047.scaffold00169 893619 1 G C - Both SNP 0047.scaffold00169 893806 1 C T scaffold19337 Both SNP 0047.scaffold00169 893836 1 A T scaffold19337 ScafM INDEL 0047.scaffold00169 894150 2 .. TT scaffold19337 ScafM SNP 0047.scaffold00169 894152 1 G T scaffold19337 Both SNP 0047.scaffold00169 895379 1 T C scaffold19337 Both SNP 0047.scaffold00169 895742 1 C T scaffold19337 Both SNP 0047.scaffold00169 895960 1 C T scaffold19337 Both SNP 0047.scaffold00169 895991 1 G A scaffold19337 ReadM SNP 0047.scaffold00169 896335 1 T A - ScafM INDEL 0047.scaffold00169 896606 16 ................ CCACCCCCCCCCCCCC scaffold19337 ReadM INDEL 0047.scaffold00169 897047 1 . G - ReadM SNP 0047.scaffold00169 897411 1 G A - ReadM SNP 0047.scaffold00169 897932 1 T G - ReadM SNP 0047.scaffold00169 898040 1 T C - ReadM SNP 0047.scaffold00169 898167 1 G A - ReadM SNP 0047.scaffold00169 898257 1 A G - Both SNP 0047.scaffold00169 899553 1 C A scaffold19337 Both SNP 0047.scaffold00169 900297 1 G A scaffold19337 Both SNP 0047.scaffold00169 900310 1 G T scaffold19337 Both SNP 0047.scaffold00169 900594 1 C G scaffold19337 Both SNP 0047.scaffold00169 902042 1 G C scaffold19337 Both SNP 0047.scaffold00169 902746 1 G T scaffold19337 Both SNP 0047.scaffold00169 902776 1 C T scaffold19337 Both SNP 0047.scaffold00169 902858 1 T G scaffold19337 Both SNP 0047.scaffold00169 902919 1 G C scaffold19337 ReadM INDEL 0047.scaffold00169 903779 3 ... TTT - Both SNP 0047.scaffold00169 904096 1 A C scaffold19337 ScafM INDEL 0047.scaffold00169 904435 62 CCGTGTTCCGGAGTGACCTGGTAATTATGTGACACTGTCAAGATTTTATACTACCTTTCGTC .............................................................. scaffold19337 Both SNP 0047.scaffold00169 904670 1 C G scaffold19337 Both SNP 0047.scaffold00169 904674 1 T C scaffold19337 ScafM SNP 0047.scaffold00169 904763 1 C T scaffold19337 ScafM INDEL 0047.scaffold00169 904883 2 TT .. scaffold19337 Both SNP 0047.scaffold00169 905001 1 C T scaffold19337 Both SNP 0047.scaffold00169 905208 1 C T scaffold19337 Both SNP 0047.scaffold00169 905276 1 G C scaffold19337 Both SNP 0047.scaffold00169 905474 1 G A scaffold19337 Both SNP 0047.scaffold00169 905755 1 A G scaffold19337 ReadM SNP 0047.scaffold00169 905898 1 A T - Both SNP 0047.scaffold00169 906298 1 G T scaffold19337 Both SNP 0047.scaffold00169 906889 1 T G scaffold19337 Both SNP 0047.scaffold00169 909818 1 G A scaffold19337 Both SNP 0047.scaffold00169 910457 1 G T scaffold19337 ReadM SNP 0047.scaffold00169 910730 1 A G - Both SNP 0047.scaffold00169 912514 1 G T scaffold19337 Both INDEL 0047.scaffold00169 913209 3 ... GAT scaffold19337 Both SNP 0047.scaffold00169 913607 1 T G scaffold19337 Both SNP 0047.scaffold00169 914210 1 G A scaffold19337 Both SNP 0047.scaffold00169 914277 1 T C scaffold19337 Both SNP 0047.scaffold00169 914453 1 G C scaffold19337 Both SNP 0047.scaffold00169 914923 1 T C scaffold19337 Both SNP 0047.scaffold00169 915568 1 G A scaffold19337 ReadM SNP 0047.scaffold00169 916151 1 A G - ReadM SNP 0047.scaffold00169 916356 1 C G - ScafM SNP 0047.scaffold00169 919526 1 C T scaffold19337 ScafM SNP 0047.scaffold00169 919662 1 C T scaffold19337 Both INDEL 0047.scaffold00169 920108 1 A . scaffold19337 ReadM SNP 0047.scaffold00169 920181 1 C T - Both SNP 0047.scaffold00169 920437 1 G A scaffold19337 ReadM SNP 0047.scaffold00169 920735 1 G C - ReadM SNP 0047.scaffold00169 920784 1 C T - ReadM SNP 0047.scaffold00169 920788 1 C T - Both SNP 0047.scaffold00169 920943 1 C T scaffold19337 ReadM SNP 0047.scaffold00169 920978 1 T A - ReadM SNP 0047.scaffold00169 921220 1 A T - ReadM SNP 0047.scaffold00169 921295 1 G T - ReadM SNP 0047.scaffold00169 921355 1 C A - ReadM SNP 0047.scaffold00169 921502 1 G C - ReadM SNP 0047.scaffold00169 921820 1 T C - ReadM SNP 0047.scaffold00169 921864 1 A G - ReadM SNP 0047.scaffold00169 922000 1 C T - ReadM SNP 0047.scaffold00169 926061 1 C G - ReadM SNP 0047.scaffold00169 926766 1 A C - ReadM SNP 0047.scaffold00169 927238 1 A G - ReadM SNP 0047.scaffold00169 931575 1 T C - ScafM INDEL 0048.scaffold00172 477 1 T . scaffold27520 ReadM SNP 0048.scaffold00172 5513 1 T A - ReadM SNP 0048.scaffold00172 11048 1 A T - Both SNP 0048.scaffold00172 11738 1 A G scaffold16 ReadM SNP 0048.scaffold00172 12504 1 T A - ScafM SNP 0048.scaffold00172 13126 1 A G scaffold16 Both SNP 0048.scaffold00172 13416 1 C G scaffold16 ScafM INDEL 0048.scaffold00172 13621 45 ............................................. GGGGGGGTCCCGGGGCCCAAGGGGGGGGGGGGGGGGGGGGGGGGG scaffold16 ReadM SNP 0048.scaffold00172 13781 1 C T - ReadM SNP 0048.scaffold00172 14209 1 C T - ReadM SNP 0048.scaffold00172 15829 1 C T - ReadM SNP 0048.scaffold00172 16903 1 A G - Both SNP 0048.scaffold00172 20617 1 C T scaffold16 ReadM SNP 0048.scaffold00172 21583 1 G A - ReadM SNP 0048.scaffold00172 22309 1 A G - ReadM SNP 0048.scaffold00172 22563 1 T C - ReadM SNP 0048.scaffold00172 22874 1 G A - ReadM SNP 0048.scaffold00172 24330 1 C T - ReadM SNP 0048.scaffold00172 25833 1 G T - Both SNP 0048.scaffold00172 26546 1 T C scaffold16 Both SNP 0048.scaffold00172 27062 1 G T scaffold16 ReadM SNP 0048.scaffold00172 27849 1 G A - ReadM SNP 0048.scaffold00172 28797 1 A G - ReadM SNP 0048.scaffold00172 29475 1 G A - ScafM INDEL 0048.scaffold00172 29618 4 .... ATAA scaffold16 ReadM SNP 0048.scaffold00172 30392 1 A G - ScafM INDEL 0048.scaffold00172 37739 8 AGTCTATC ........ scaffold16161 Both SNP 0048.scaffold00172 37813 1 T C scaffold16161 ReadM SNP 0048.scaffold00172 39703 1 A G - ReadM SNP 0048.scaffold00172 40118 1 A G - ScafM SNP 0048.scaffold00172 40681 1 C A scaffold16161 ScafM SNP 0048.scaffold00172 40686 1 A G scaffold16161 Both INDEL 0048.scaffold00172 42516 2 AT .. scaffold16161 Both SNP 0048.scaffold00172 42626 1 C A scaffold16161 ReadM SNP 0048.scaffold00172 42979 1 C T - Both SNP 0048.scaffold00172 43182 1 A G scaffold16161 Both SNP 0048.scaffold00172 43719 1 G C scaffold16161 ScafM INDEL 0048.scaffold00172 53522 1 T . scaffold16161 Both SNP 0048.scaffold00172 53673 1 G C scaffold16161 ReadM SNP 0048.scaffold00172 53918 1 T C - ScafM SNP 0048.scaffold00172 55255 1 T C scaffold16161 Both SNP 0048.scaffold00172 55356 1 C T scaffold16161 Both SNP 0048.scaffold00172 56687 1 A G scaffold16161 Both SNP 0048.scaffold00172 56775 1 A C scaffold16161 ScafM INDEL 0048.scaffold00172 57384 26 .......................... AAATTAGATCCTGCACCGAGGTGTAG scaffold16161 ScafM SNP 0048.scaffold00172 58267 1 T G scaffold16161 ScafM SNP 0048.scaffold00172 58282 1 T A scaffold16161 ScafM INDEL 0048.scaffold00172 58291 1 . C scaffold16161 ScafM SNP 0048.scaffold00172 58322 1 A T scaffold16161 ScafM SNP 0048.scaffold00172 58331 1 T C scaffold16161 ScafM INDEL 0048.scaffold00172 58406 3 ... TGT scaffold16161 ScafM SNP 0048.scaffold00172 58530 1 A G scaffold16161 ScafM SNP 0048.scaffold00172 58630 1 G A scaffold16161 ScafM SNP 0048.scaffold00172 58647 1 T C scaffold16161 ScafM INDEL 0048.scaffold00172 58718 2 .T GG scaffold16161 ScafM SNP 0048.scaffold00172 58816 1 T C scaffold16161 ScafM INDEL 0048.scaffold00172 58852 3 ..C GGA scaffold16161 ScafM SNP 0048.scaffold00172 58856 1 G A scaffold16161 ScafM SNP 0048.scaffold00172 58866 2 AT TA scaffold16161 ScafM SNP 0048.scaffold00172 58891 1 C G scaffold16161 ScafM SNP 0048.scaffold00172 58896 1 T C scaffold16161 ScafM SNP 0048.scaffold00172 59757 1 T C scaffold16161 ScafM SNP 0048.scaffold00172 59785 1 G T scaffold16161 ScafM SNP 0048.scaffold00172 59940 1 G A scaffold16161 ScafM SNP 0048.scaffold00172 60203 1 G C scaffold16161 ScafM SNP 0048.scaffold00172 60848 1 T G scaffold4898 ScafM SNP 0048.scaffold00172 60898 1 C T scaffold4898 ScafM SNP 0048.scaffold00172 60907 1 T A scaffold4898 ScafM SNP 0048.scaffold00172 60930 1 T A scaffold4898 ScafM SNP 0048.scaffold00172 60970 1 A G scaffold4898 ScafM SNP 0048.scaffold00172 61002 1 T G scaffold4898 ScafM SNP 0048.scaffold00172 61050 1 C A scaffold4898 ScafM SNP 0048.scaffold00172 61053 1 A T scaffold4898 ScafM SNP 0048.scaffold00172 61078 1 C T scaffold4898 ScafM SNP 0048.scaffold00172 61138 1 A G scaffold4898 ScafM SNP 0048.scaffold00172 61141 1 G T scaffold4898 ScafM SNP 0048.scaffold00172 61144 1 T G scaffold4898 ScafM SNP 0048.scaffold00172 61224 1 A T scaffold4898 ScafM SNP 0048.scaffold00172 61229 2 TT AG scaffold4898 ScafM SNP 0048.scaffold00172 61247 2 AC CT scaffold4898 ScafM SNP 0048.scaffold00172 61306 1 A C scaffold4898 ScafM INDEL 0048.scaffold00172 61312 1 . G scaffold4898 ScafM SNP 0048.scaffold00172 61334 1 A G scaffold4898 ScafM SNP 0048.scaffold00172 61346 1 A T scaffold4898 ScafM SNP 0048.scaffold00172 61352 1 A G scaffold4898 ScafM SNP 0048.scaffold00172 61365 1 G A scaffold4898 ScafM SNP 0048.scaffold00172 61393 1 C G scaffold4898 ScafM SNP 0048.scaffold00172 61410 1 T G scaffold4898 ScafM SNP 0048.scaffold00172 61462 1 T C scaffold4898 ScafM SNP 0048.scaffold00172 61477 1 G A scaffold4898 ScafM SNP 0048.scaffold00172 61484 1 A T scaffold4898 ScafM SNP 0048.scaffold00172 61497 1 G C scaffold4898 ScafM SNP 0048.scaffold00172 61499 1 C T scaffold4898 ScafM SNP 0048.scaffold00172 61505 1 T A scaffold4898 ScafM SNP 0048.scaffold00172 61512 2 GT CA scaffold4898 ScafM SNP 0048.scaffold00172 61519 1 C G scaffold4898 ReadM SNP 0048.scaffold00172 61587 1 G A - ReadM SNP 0048.scaffold00172 62213 1 A G - ScafM SNP 0048.scaffold00172 62805 1 T C scaffold4783 ScafM SNP 0048.scaffold00172 62853 1 T C scaffold4783 ScafM SNP 0048.scaffold00172 62919 1 A T scaffold4783 ScafM SNP 0048.scaffold00172 62940 1 C A scaffold4783 ScafM SNP 0048.scaffold00172 62948 1 G A scaffold4783 ScafM SNP 0048.scaffold00172 62964 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 62994 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63045 1 T C scaffold4783 ScafM SNP 0048.scaffold00172 63049 1 C T scaffold4783 ScafM SNP 0048.scaffold00172 63235 1 C T scaffold4783 ScafM SNP 0048.scaffold00172 63279 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63291 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 63482 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63568 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63599 1 C A scaffold4783 ScafM SNP 0048.scaffold00172 63604 1 T G scaffold4783 ScafM SNP 0048.scaffold00172 63611 1 G A scaffold4783 ScafM SNP 0048.scaffold00172 63652 1 C T scaffold4783 ScafM SNP 0048.scaffold00172 63676 2 AC TG scaffold4783 ScafM SNP 0048.scaffold00172 63696 1 C A scaffold4783 ScafM SNP 0048.scaffold00172 63721 1 T G scaffold4783 ScafM SNP 0048.scaffold00172 63772 1 A G scaffold4783 ScafM INDEL 0048.scaffold00172 63804 2 .C AG scaffold4783 ScafM SNP 0048.scaffold00172 63807 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 63809 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 63811 1 G T scaffold4783 ScafM INDEL 0048.scaffold00172 63812 1 . A scaffold4783 ScafM SNP 0048.scaffold00172 63820 1 G A scaffold4783 ScafM SNP 0048.scaffold00172 63833 1 A T scaffold4783 ScafM SNP 0048.scaffold00172 63856 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63884 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 63912 1 A G scaffold4783 ScafM SNP 0048.scaffold00172 63992 1 A T scaffold4783 ScafM SNP 0048.scaffold00172 63997 1 C G scaffold4783 ScafM SNP 0048.scaffold00172 64021 1 T A scaffold4783 ScafM SNP 0048.scaffold00172 64027 1 T C scaffold4783 ScafM SNP 0048.scaffold00172 64041 1 G T scaffold4783 ScafM SNP 0048.scaffold00172 64048 1 G A scaffold4783 ScafM SNP 0048.scaffold00172 64057 1 A C scaffold4783 ScafM SNP 0048.scaffold00172 64116 1 G A scaffold4783 ReadM INDEL 0048.scaffold00172 68257 1 A . - ReadM SNP 0048.scaffold00172 68891 1 T C - ScafM SNP 0048.scaffold00172 72152 1 A G scaffold5281 Both SNP 0048.scaffold00172 72455 1 A G scaffold5281 ScafM SNP 0048.scaffold00172 72615 1 T A scaffold5281 ScafM SNP 0048.scaffold00172 73065 1 G A scaffold5281 ScafM INDEL 0048.scaffold00172 73203 29 ............................. ATGAGATGAAAACGCAATGAACATTAGAT scaffold5281 ScafM INDEL 0048.scaffold00172 73204 9 ......... TAATATCAA scaffold5281 ScafM INDEL 0048.scaffold00172 73209 41 ......................................... AATGAAGGCAATGAAGGCAATTATTACTTACATATAAGATG scaffold5281 ScafM INDEL 0048.scaffold00172 73211 1 . A scaffold5281 ScafM SNP 0048.scaffold00172 73326 1 T G scaffold5281 ScafM SNP 0048.scaffold00172 77426 1 G A scaffold5281 ScafM SNP 0048.scaffold00172 77803 1 G T scaffold5281 ScafM SNP 0048.scaffold00172 77805 1 T G scaffold5281 ScafM SNP 0048.scaffold00172 78507 1 T C scaffold5281 Both SNP 0048.scaffold00172 79501 1 A G scaffold5281 Both SNP 0048.scaffold00172 81102 1 C A scaffold5281 Both SNP 0048.scaffold00172 82599 1 T C scaffold5281 Both SNP 0048.scaffold00172 82726 1 T C scaffold5281 ReadM INDEL 0048.scaffold00172 86703 1 A . - ReadM SNP 0048.scaffold00172 87844 1 A G - ReadM SNP 0048.scaffold00172 87882 1 C T - ReadM INDEL 0048.scaffold00172 88427 1 . A - ReadM SNP 0048.scaffold00172 88718 1 C T - ScafM SNP 0048.scaffold00172 94537 1 T C scaffold5281 ReadM SNP 0048.scaffold00172 96119 1 C T - ReadM SNP 0048.scaffold00172 96724 1 A T - ReadM SNP 0048.scaffold00172 98911 1 C T - ReadM SNP 0048.scaffold00172 103214 1 T C - ReadM SNP 0048.scaffold00172 109059 1 A G - ReadM SNP 0048.scaffold00172 110144 1 C T - ReadM SNP 0048.scaffold00172 112419 1 T C - ReadM SNP 0048.scaffold00172 112437 1 G T - ReadM SNP 0048.scaffold00172 112549 1 A G - ReadM SNP 0048.scaffold00172 113541 1 T A - ReadM SNP 0048.scaffold00172 113993 1 G A - ScafM SNP 0048.scaffold00172 115968 1 T A scaffold5281 Both INDEL 0048.scaffold00172 116687 1 . G scaffold5281 ReadM INDEL 0048.scaffold00172 117841 1 . A - ReadM SNP 0048.scaffold00172 119031 1 C A - ReadM SNP 0048.scaffold00172 119340 1 A T - ReadM SNP 0048.scaffold00172 119610 1 T C - Both SNP 0048.scaffold00172 120310 1 A C scaffold5281 ReadM SNP 0048.scaffold00172 121713 1 G A - ScafM SNP 0048.scaffold00172 122712 1 T A scaffold5281 ReadM SNP 0048.scaffold00172 125816 1 C T - ScafM SNP 0048.scaffold00172 126953 1 G C scaffold5281 ScafM INDEL 0048.scaffold00172 126987 1 . A scaffold5281 ScafM SNP 0048.scaffold00172 128426 1 T C scaffold5281 ScafM INDEL 0048.scaffold00172 128712 1 . A scaffold5281 Both SNP 0048.scaffold00172 129122 1 T G scaffold5281 Both SNP 0048.scaffold00172 129297 1 A G scaffold5281 Both SNP 0048.scaffold00172 129344 1 A G scaffold5281 Both SNP 0048.scaffold00172 129837 1 G A scaffold5281 Both SNP 0048.scaffold00172 130042 1 G A scaffold5281 ScafM SNP 0048.scaffold00172 130221 2 CC GT scaffold5281 ScafM INDEL 0048.scaffold00172 130231 5 ATTTG ..... scaffold5281 Both SNP 0048.scaffold00172 130277 1 C T scaffold5281 Both SNP 0048.scaffold00172 130286 1 T A scaffold5281 Both SNP 0048.scaffold00172 130652 1 T C scaffold5281 Both SNP 0048.scaffold00172 130718 1 C T scaffold5281 Both SNP 0048.scaffold00172 130794 1 T C scaffold5281 Both SNP 0048.scaffold00172 134085 1 G T scaffold5281 Both INDEL 0048.scaffold00172 134574 1 G . scaffold5281 Both INDEL 0048.scaffold00172 135172 1 T . scaffold5281 ReadM SNP 0048.scaffold00172 135226 1 G T - ReadM SNP 0048.scaffold00172 136508 1 T G - ReadM SNP 0048.scaffold00172 136762 1 C T - ReadM SNP 0048.scaffold00172 136847 1 A G - ReadM SNP 0048.scaffold00172 136850 1 C G - ReadM SNP 0048.scaffold00172 137048 1 T C - ReadM SNP 0048.scaffold00172 137243 1 A C - ReadM SNP 0048.scaffold00172 137673 1 G A - ReadM SNP 0048.scaffold00172 137719 1 C T - ReadM SNP 0048.scaffold00172 137811 1 G A - ReadM SNP 0048.scaffold00172 137818 1 C T - ReadM SNP 0048.scaffold00172 137835 1 T G - ReadM SNP 0048.scaffold00172 137950 1 C T - ReadM INDEL 0049.scaffold00172 38160 1 . T - ScafM SNP 0049.scaffold00172 58149 1 G T scaffold914 ScafM SNP 0049.scaffold00172 58172 1 G T scaffold914 ScafM SNP 0049.scaffold00172 58175 1 C T scaffold914 ScafM INDEL 0049.scaffold00172 58187 1 T . scaffold914 ScafM SNP 0049.scaffold00172 58212 1 C T scaffold914 ScafM INDEL 0049.scaffold00172 58219 1 T . scaffold914 ScafM SNP 0049.scaffold00172 58231 2 GC TT scaffold914 ScafM SNP 0049.scaffold00172 58275 2 CT TG scaffold914 ScafM INDEL 0049.scaffold00172 58300 4 TTAT ...C scaffold914 ScafM SNP 0049.scaffold00172 58337 1 C T scaffold914 ScafM SNP 0049.scaffold00172 58343 1 G T scaffold914 ReadM INDEL 0049.scaffold00172 71868 1 . T - ScafM INDEL 0049.scaffold00172 78838 1 . T scaffold3610 ScafM INDEL 0049.scaffold00172 112413 11 ........... CCCCCCCCCCC scaffold3302 ScafM INDEL 0049.scaffold00172 113669 2 CG .T scaffold3302 ScafM SNP 0049.scaffold00172 113695 1 T C scaffold3302 ScafM SNP 0049.scaffold00172 113711 1 T C scaffold3302 ScafM SNP 0049.scaffold00172 113733 1 G A scaffold3302 ScafM SNP 0049.scaffold00172 113740 1 A C scaffold3302 ScafM INDEL 0049.scaffold00172 119259 2 .. TT scaffold3302 ScafM INDEL 0049.scaffold00172 126831 1 . T scaffold3302 ReadM SNP 0049.scaffold00172 127396 1 G A - ScafM INDEL 0049.scaffold00172 130851 1 . T scaffold3302 ScafM SNP 0049.scaffold00172 130853 2 AC TT scaffold3302 ScafM INDEL 0049.scaffold00172 130877 18 .................. CAGCATCTAAAGCTCATC scaffold3302 ScafM INDEL 0049.scaffold00172 139263 17 ................. CCCCCCCCCCCCCCCCC scaffold3302 ScafM INDEL 0049.scaffold00172 140982 20 .................... GGGGGGGGGGGGGGGGGACC scaffold3302 ScafM SNP 0049.scaffold00172 143367 1 C T scaffold3302 ReadM SNP 0049.scaffold00172 146666 1 C G - ReadM SNP 0049.scaffold00172 146914 1 A G - ScafM INDEL 0049.scaffold00172 151811 1 A . scaffold3302 ScafM INDEL 0050.scaffold00177 1641 19 ................... TACACGCACACACATACAC scaffold16067 ScafM INDEL 0050.scaffold00177 9271 1 . A scaffold16067 ScafM INDEL 0050.scaffold00177 12120 1 . T scaffold16067 ScafM INDEL 0050.scaffold00177 15542 20 .................... GGGGGGGGGGGGGTGGGGGG scaffold16067 ScafM SNP 0050.scaffold00177 52972 1 A G scaffold7317 ScafM INDEL 0050.scaffold00177 109037 1 G . scaffold7317 ScafM SNP 0050.scaffold00177 121431 1 A C scaffold7317 ScafM INDEL 0050.scaffold00177 136104 1 . A scaffold7317 ScafM INDEL 0050.scaffold00177 152995 3 ... TTT scaffold7317 ScafM INDEL 0050.scaffold00177 163255 1 . A scaffold7317 ScafM SNP 0050.scaffold00177 163620 1 A T scaffold7317 ScafM SNP 0050.scaffold00177 163623 1 T G scaffold7317 ScafM SNP 0050.scaffold00177 164510 1 A T scaffold7317 ScafM SNP 0050.scaffold00177 165410 1 A G scaffold7317 ScafM INDEL 0050.scaffold00177 167148 1 . A scaffold7317 ScafM SNP 0050.scaffold00177 167979 1 G A scaffold7317 ScafM SNP 0050.scaffold00177 168053 1 G A scaffold7317 ScafM INDEL 0050.scaffold00177 168104 1 A . scaffold7317 ScafM SNP 0050.scaffold00177 168115 1 G A scaffold7317 ScafM SNP 0050.scaffold00177 168885 1 C T scaffold7317 ScafM SNP 0050.scaffold00177 176309 1 A G scaffold20513 ScafM SNP 0050.scaffold00177 180611 1 G A scaffold13042 ScafM SNP 0050.scaffold00177 180631 1 C T scaffold13042 ScafM SNP 0050.scaffold00177 181102 1 T A scaffold13042 ScafM SNP 0050.scaffold00177 181147 1 C T scaffold13042 ScafM SNP 0050.scaffold00177 181774 1 A G scaffold20037 ScafM SNP 0050.scaffold00177 184124 1 A G scaffold20037 ScafM SNP 0050.scaffold00177 184686 1 A C scaffold20037 ScafM SNP 0050.scaffold00177 184846 1 G A scaffold20037 ScafM SNP 0050.scaffold00177 184931 1 G T scaffold20037 ScafM SNP 0050.scaffold00177 212739 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 212761 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 212867 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 212918 1 T A scaffold3011 ReadM INDEL 0050.scaffold00177 213315 3 ... AAG - ReadM SNP 0050.scaffold00177 214185 1 T C - ReadM SNP 0050.scaffold00177 214273 1 A G - ReadM SNP 0050.scaffold00177 214555 1 A G - ReadM SNP 0050.scaffold00177 214985 1 G C - ScafM SNP 0050.scaffold00177 215571 1 C T scaffold3011 ReadM SNP 0050.scaffold00177 216707 1 G A - ReadM INDEL 0050.scaffold00177 216793 2 GG .. - ReadM INDEL 0050.scaffold00177 216863 1 . T - ReadM SNP 0050.scaffold00177 217033 1 G A - ReadM SNP 0050.scaffold00177 217088 1 A T - ReadM SNP 0050.scaffold00177 217414 1 G C - ReadM SNP 0050.scaffold00177 217462 1 G A - ReadM SNP 0050.scaffold00177 217698 1 A G - ReadM SNP 0050.scaffold00177 218298 1 A G - ReadM SNP 0050.scaffold00177 218736 1 T C - ReadM SNP 0050.scaffold00177 218942 1 T C - ScafM INDEL 0050.scaffold00177 220787 2 .. TT scaffold3011 ScafM SNP 0050.scaffold00177 220789 1 G T scaffold3011 Both INDEL 0050.scaffold00177 220909 2 .. TT scaffold3011 ReadM SNP 0050.scaffold00177 220988 1 C G - ReadM SNP 0050.scaffold00177 221026 1 C G - ReadM SNP 0050.scaffold00177 221033 1 C G - ReadM SNP 0050.scaffold00177 221348 1 T C - ReadM SNP 0050.scaffold00177 221385 1 C T - ReadM SNP 0050.scaffold00177 221406 1 T C - ReadM SNP 0050.scaffold00177 221617 1 T C - ReadM SNP 0050.scaffold00177 221704 1 G C - ReadM SNP 0050.scaffold00177 222000 1 G A - ReadM SNP 0050.scaffold00177 222813 1 T A - ReadM SNP 0050.scaffold00177 223277 1 A T - ScafM SNP 0050.scaffold00177 223475 1 T G scaffold3011 ReadM SNP 0050.scaffold00177 223940 1 G T - ReadM SNP 0050.scaffold00177 223956 1 A C - ReadM INDEL 0050.scaffold00177 224025 1 . T - ReadM SNP 0050.scaffold00177 224273 1 C T - ReadM SNP 0050.scaffold00177 224325 1 G A - ReadM SNP 0050.scaffold00177 224465 1 T A - ReadM SNP 0050.scaffold00177 224670 1 C T - ReadM SNP 0050.scaffold00177 224851 1 C T - ReadM SNP 0050.scaffold00177 224899 1 T A - ScafM SNP 0050.scaffold00177 226227 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 226533 1 G T - ScafM SNP 0050.scaffold00177 226946 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 226952 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 226957 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 226962 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 227013 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 227154 1 T C scaffold3011 Both SNP 0050.scaffold00177 228050 1 C T scaffold3011 Both SNP 0050.scaffold00177 228103 1 A G scaffold3011 Both SNP 0050.scaffold00177 228159 1 A G scaffold3011 Both SNP 0050.scaffold00177 228179 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 228206 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 228213 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 228237 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 228244 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 228252 11 TCTTCTCTATC ........... scaffold3011 ScafM SNP 0050.scaffold00177 228285 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 228320 1 T . scaffold3011 ScafM INDEL 0050.scaffold00177 228328 2 CT .A scaffold3011 ScafM INDEL 0050.scaffold00177 228332 2 GC .. scaffold3011 ScafM INDEL 0050.scaffold00177 228335 1 C . scaffold3011 ScafM SNP 0050.scaffold00177 228368 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 228380 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 228399 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 228424 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 228427 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 228437 2 CT TC scaffold3011 ScafM SNP 0050.scaffold00177 228452 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 228457 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 228462 1 G A scaffold3011 Both SNP 0050.scaffold00177 228487 1 A T scaffold3011 Both SNP 0050.scaffold00177 228607 1 G T scaffold3011 Both SNP 0050.scaffold00177 228683 1 A C scaffold3011 Both SNP 0050.scaffold00177 228690 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 228730 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 228967 1 A C - ReadM SNP 0050.scaffold00177 228982 1 T C - Both SNP 0050.scaffold00177 229069 1 T C scaffold3011 Both SNP 0050.scaffold00177 229089 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229140 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 229158 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229169 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229200 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 229238 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229246 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229276 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229311 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229503 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229514 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 229517 1 A G scaffold3011 Both SNP 0050.scaffold00177 229597 1 G A scaffold3011 Both SNP 0050.scaffold00177 229621 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229775 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 229793 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229803 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 229805 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 229825 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 229864 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 230034 1 A T - ReadM SNP 0050.scaffold00177 231301 1 A G - ReadM SNP 0050.scaffold00177 231314 1 A T - ReadM SNP 0050.scaffold00177 231345 1 G T - ReadM SNP 0050.scaffold00177 233191 1 G A - ReadM SNP 0050.scaffold00177 233681 1 G T - ScafM SNP 0050.scaffold00177 235539 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 235549 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 235592 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 235594 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 235622 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 235641 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 235649 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 235652 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 235673 2 .G AA scaffold3011 ScafM SNP 0050.scaffold00177 235700 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 235703 1 A C scaffold3011 ReadM SNP 0050.scaffold00177 236062 1 C G - ReadM SNP 0050.scaffold00177 236066 1 G A - ReadM SNP 0050.scaffold00177 236109 1 T C - ReadM SNP 0050.scaffold00177 236189 1 C T - ReadM SNP 0050.scaffold00177 236229 1 A G - ReadM SNP 0050.scaffold00177 236245 1 A C - ReadM SNP 0050.scaffold00177 236259 1 C A - ReadM SNP 0050.scaffold00177 236305 1 T G - ReadM SNP 0050.scaffold00177 236357 1 C T - ReadM SNP 0050.scaffold00177 236484 1 G A - ReadM SNP 0050.scaffold00177 236567 1 T A - ReadM SNP 0050.scaffold00177 236590 1 C T - ReadM SNP 0050.scaffold00177 236594 1 A C - ReadM SNP 0050.scaffold00177 236679 1 A G - ReadM SNP 0050.scaffold00177 236688 1 G A - Both SNP 0050.scaffold00177 236810 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 236835 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 236851 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 236860 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 236896 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 236903 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 236934 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 236947 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 236985 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 237001 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 237017 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 237019 2 TC AA scaffold3011 ScafM SNP 0050.scaffold00177 237045 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 237063 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 237074 2 .. TG scaffold3011 ScafM SNP 0050.scaffold00177 237081 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 237086 2 TC CT scaffold3011 ScafM SNP 0050.scaffold00177 237148 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 237155 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 237230 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 237261 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 237266 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 237344 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 237404 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 237409 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 237421 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 237449 1 C T scaffold3011 ReadM SNP 0050.scaffold00177 238031 1 T C - ReadM SNP 0050.scaffold00177 238060 1 T G - ReadM SNP 0050.scaffold00177 238261 1 C T - ReadM SNP 0050.scaffold00177 238351 1 A T - ScafM SNP 0050.scaffold00177 238901 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 239887 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 239974 2 TT AC scaffold3011 ScafM SNP 0050.scaffold00177 239998 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 240009 1 C A scaffold3011 ScafM INDEL 0050.scaffold00177 240117 1 T . scaffold3011 ScafM SNP 0050.scaffold00177 240352 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 240368 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 240406 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 240410 1 G T scaffold3011 Both SNP 0050.scaffold00177 240469 1 A C scaffold3011 Both SNP 0050.scaffold00177 240530 1 A G scaffold3011 ReadM INDEL 0050.scaffold00177 240548 1 . T - ReadM SNP 0050.scaffold00177 240604 1 G A - ReadM SNP 0050.scaffold00177 240631 1 C A - ReadM SNP 0050.scaffold00177 240674 1 T G - ReadM SNP 0050.scaffold00177 240877 1 T A - ReadM SNP 0050.scaffold00177 240914 1 A G - ReadM SNP 0050.scaffold00177 241047 1 C T - ReadM SNP 0050.scaffold00177 241100 1 G A - ScafM SNP 0050.scaffold00177 241581 2 TT GC scaffold3011 ScafM SNP 0050.scaffold00177 241618 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 241630 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 241636 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 241652 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 241690 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 241704 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 241714 2 AA GG scaffold3011 ScafM SNP 0050.scaffold00177 241722 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 241729 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 241731 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 241771 1 A C scaffold3011 ScafM INDEL 0050.scaffold00177 241775 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 241777 1 A C scaffold3011 ScafM INDEL 0050.scaffold00177 241778 1 . C scaffold3011 ScafM INDEL 0050.scaffold00177 241781 1 C . scaffold3011 ScafM SNP 0050.scaffold00177 241804 2 CT TC scaffold3011 ScafM SNP 0050.scaffold00177 241818 2 AG GC scaffold3011 ScafM SNP 0050.scaffold00177 241826 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 241890 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 241904 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 241909 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 241919 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 241941 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 241971 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 241985 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 242009 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 242031 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 242039 2 AA .G scaffold3011 ScafM SNP 0050.scaffold00177 242050 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 242070 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 242201 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 242239 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 242255 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 242271 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 242276 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 242283 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 242315 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 242318 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 242338 1 T . scaffold3011 ScafM SNP 0050.scaffold00177 242357 2 GA AC scaffold3011 ScafM SNP 0050.scaffold00177 242406 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 242433 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 242446 1 A G scaffold3011 ReadM SNP 0050.scaffold00177 242670 1 A G - Both SNP 0050.scaffold00177 242704 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 242723 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 242744 1 . T scaffold3011 ScafM SNP 0050.scaffold00177 242768 2 TT GC scaffold3011 ScafM SNP 0050.scaffold00177 242780 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 242793 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 242952 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 243021 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 243027 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 243042 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 243046 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 243050 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 243053 2 CG AA scaffold3011 ScafM SNP 0050.scaffold00177 243056 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 243071 1 G T scaffold3011 Both SNP 0050.scaffold00177 243093 1 G A scaffold3011 Both SNP 0050.scaffold00177 243118 1 T A scaffold3011 Both SNP 0050.scaffold00177 243134 1 C T scaffold3011 ReadM INDEL 0050.scaffold00177 243196 1 C . - Both INDEL 0050.scaffold00177 243197 2 CA .. scaffold3011 Both SNP 0050.scaffold00177 243222 1 T C scaffold3011 Both SNP 0050.scaffold00177 243276 1 T A scaffold3011 Both SNP 0050.scaffold00177 243309 1 T C scaffold3011 Both SNP 0050.scaffold00177 243349 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 243392 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 243394 1 G T scaffold3011 Both SNP 0050.scaffold00177 243414 1 C G scaffold3011 Both SNP 0050.scaffold00177 243462 1 G A scaffold3011 Both SNP 0050.scaffold00177 243473 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 243527 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 243532 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 243540 2 AG GA scaffold3011 ReadM SNP 0050.scaffold00177 243607 1 C T - ReadM SNP 0050.scaffold00177 243683 1 T G - ReadM SNP 0050.scaffold00177 243794 1 A G - ReadM SNP 0050.scaffold00177 243824 1 A C - ScafM SNP 0050.scaffold00177 244146 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 244163 2 AA GG scaffold3011 ScafM SNP 0050.scaffold00177 244172 2 TT CA scaffold3011 ScafM SNP 0050.scaffold00177 244188 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 246449 1 G A - ReadM SNP 0050.scaffold00177 246514 1 C T - ReadM SNP 0050.scaffold00177 246526 1 A G - ReadM SNP 0050.scaffold00177 246555 1 C T - ScafM SNP 0050.scaffold00177 246694 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 246698 1 G . scaffold3011 ScafM SNP 0050.scaffold00177 246704 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 246721 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 246725 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 246729 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 246763 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 246775 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 246815 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 246824 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 246860 4 CATG .... scaffold3011 ScafM SNP 0050.scaffold00177 246867 1 G T scaffold3011 Both SNP 0050.scaffold00177 246913 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 247004 2 .. AT scaffold3011 ScafM SNP 0050.scaffold00177 247028 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 247041 1 C T scaffold3011 ReadM SNP 0050.scaffold00177 247101 1 A G - ReadM SNP 0050.scaffold00177 247138 1 A G - ReadM SNP 0050.scaffold00177 247141 1 G C - ScafM SNP 0050.scaffold00177 247189 1 T C scaffold3011 ReadM SNP 0050.scaffold00177 247430 1 A G - ReadM SNP 0050.scaffold00177 247489 1 A C - ReadM SNP 0050.scaffold00177 247502 1 G A - ReadM SNP 0050.scaffold00177 247963 1 T C - ReadM SNP 0050.scaffold00177 247998 1 T G - ReadM SNP 0050.scaffold00177 248007 1 A T - ReadM SNP 0050.scaffold00177 248014 1 A G - ReadM SNP 0050.scaffold00177 248244 1 T C - ReadM SNP 0050.scaffold00177 248352 1 T C - ReadM SNP 0050.scaffold00177 248366 1 G A - ReadM SNP 0050.scaffold00177 248406 1 C T - ReadM SNP 0050.scaffold00177 248552 1 C T - ReadM SNP 0050.scaffold00177 248581 1 G A - ReadM SNP 0050.scaffold00177 248624 1 A G - ReadM SNP 0050.scaffold00177 248727 1 G T - ReadM SNP 0050.scaffold00177 248778 1 A C - ReadM SNP 0050.scaffold00177 248809 1 C T - ReadM SNP 0050.scaffold00177 248898 1 G A - ReadM SNP 0050.scaffold00177 248904 1 C A - ReadM SNP 0050.scaffold00177 248935 1 A G - ReadM SNP 0050.scaffold00177 248993 1 A G - ReadM SNP 0050.scaffold00177 249005 1 C G - ReadM SNP 0050.scaffold00177 249102 1 G A - ReadM SNP 0050.scaffold00177 249216 1 C T - ReadM SNP 0050.scaffold00177 249229 1 C T - ReadM SNP 0050.scaffold00177 249275 1 A G - ReadM SNP 0050.scaffold00177 249347 1 G A - ReadM SNP 0050.scaffold00177 249350 1 G A - ReadM SNP 0050.scaffold00177 249478 1 A G - ReadM SNP 0050.scaffold00177 249485 1 G A - ReadM INDEL 0050.scaffold00177 249581 1 T . - ReadM SNP 0050.scaffold00177 249605 1 A C - ScafM SNP 0050.scaffold00177 249641 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 249673 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 249681 2 .. CT scaffold3011 ScafM SNP 0050.scaffold00177 249683 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 249693 1 C A scaffold3011 Both SNP 0050.scaffold00177 249733 1 C T scaffold3011 Both SNP 0050.scaffold00177 249771 1 G A scaffold3011 Both INDEL 0050.scaffold00177 249828 3 ... ATT scaffold3011 ScafM SNP 0050.scaffold00177 249890 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 249903 1 A C scaffold3011 ReadM SNP 0050.scaffold00177 249947 1 G A - ReadM SNP 0050.scaffold00177 249958 1 G A - ReadM SNP 0050.scaffold00177 250016 1 A C - ReadM INDEL 0050.scaffold00177 250033 1 A . - ScafM INDEL 0050.scaffold00177 250112 2 GC .T scaffold3011 ScafM SNP 0050.scaffold00177 250115 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 250129 2 CT TA scaffold3011 ScafM SNP 0050.scaffold00177 250151 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 250207 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 250228 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 250231 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 250268 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 250276 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 250302 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 250304 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 250309 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 250338 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 250352 1 G T scaffold3011 ScafM INDEL 0050.scaffold00177 250357 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 250378 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 250383 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 250391 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 250411 1 T G scaffold3011 ScafM INDEL 0050.scaffold00177 250435 4 .... TGCA scaffold3011 ScafM SNP 0050.scaffold00177 250449 1 T G scaffold3011 Both SNP 0050.scaffold00177 250472 1 C A scaffold3011 ReadM SNP 0050.scaffold00177 250550 1 T C - ReadM SNP 0050.scaffold00177 250645 1 A G - ReadM SNP 0050.scaffold00177 250652 1 G T - ReadM SNP 0050.scaffold00177 250713 1 A G - ReadM SNP 0050.scaffold00177 250863 1 G A - ReadM SNP 0050.scaffold00177 250877 1 A C - ReadM SNP 0050.scaffold00177 250948 1 T C - ReadM SNP 0050.scaffold00177 250962 1 A C - ReadM SNP 0050.scaffold00177 251027 1 G T - ReadM SNP 0050.scaffold00177 251061 1 A T - ReadM SNP 0050.scaffold00177 251187 1 C G - ReadM SNP 0050.scaffold00177 251230 1 T A - ReadM SNP 0050.scaffold00177 251244 1 G A - ReadM SNP 0050.scaffold00177 251355 1 A G - ReadM SNP 0050.scaffold00177 251360 1 C T - Both SNP 0050.scaffold00177 252025 1 A G scaffold3011 Both SNP 0050.scaffold00177 252045 1 A C scaffold3011 Both SNP 0050.scaffold00177 252152 1 C T scaffold3011 Both SNP 0050.scaffold00177 252179 1 T C scaffold3011 Both SNP 0050.scaffold00177 252280 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 252296 1 C T scaffold3011 Both SNP 0050.scaffold00177 252314 1 C T scaffold3011 Both SNP 0050.scaffold00177 252344 1 A G scaffold3011 Both SNP 0050.scaffold00177 252420 1 T C scaffold3011 Both SNP 0050.scaffold00177 252462 1 G A scaffold3011 Both SNP 0050.scaffold00177 252609 1 A G scaffold3011 Both SNP 0050.scaffold00177 252656 1 C A scaffold3011 Both SNP 0050.scaffold00177 252660 1 T C scaffold3011 Both SNP 0050.scaffold00177 252738 1 C T scaffold3011 Both SNP 0050.scaffold00177 252744 1 T C scaffold3011 ReadM INDEL 0050.scaffold00177 252805 1 T . - ReadM SNP 0050.scaffold00177 252952 1 G A - ReadM SNP 0050.scaffold00177 252959 1 C T - ReadM SNP 0050.scaffold00177 252986 1 T C - Both SNP 0050.scaffold00177 253070 1 G A scaffold3011 Both SNP 0050.scaffold00177 253089 1 C T scaffold3011 Both SNP 0050.scaffold00177 253107 1 C T scaffold3011 Both SNP 0050.scaffold00177 253203 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 253263 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 253265 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 253271 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 253291 1 C A scaffold3011 Both SNP 0050.scaffold00177 253309 1 G A scaffold3011 Both SNP 0050.scaffold00177 253319 1 A G scaffold3011 ReadM SNP 0050.scaffold00177 253371 1 G A - ReadM SNP 0050.scaffold00177 253621 1 G T - Both INDEL 0050.scaffold00177 253642 1 T . scaffold3011 Both SNP 0050.scaffold00177 253681 1 T C scaffold3011 Both SNP 0050.scaffold00177 253714 1 T G scaffold3011 Both SNP 0050.scaffold00177 253792 1 T C scaffold3011 ReadM SNP 0050.scaffold00177 253810 1 A G - ReadM SNP 0050.scaffold00177 253878 1 T C - ReadM SNP 0050.scaffold00177 253927 1 A T - ReadM SNP 0050.scaffold00177 253933 1 T C - ReadM SNP 0050.scaffold00177 254017 1 A G - ReadM SNP 0050.scaffold00177 254074 1 A G - ReadM SNP 0050.scaffold00177 254087 1 C A - ReadM SNP 0050.scaffold00177 254126 1 T A - ReadM SNP 0050.scaffold00177 254138 1 G T - ReadM SNP 0050.scaffold00177 254227 1 T C - ReadM SNP 0050.scaffold00177 254234 1 A G - ReadM SNP 0050.scaffold00177 254293 1 A G - ReadM SNP 0050.scaffold00177 254318 1 T C - ReadM SNP 0050.scaffold00177 254388 1 G C - ScafM SNP 0050.scaffold00177 254550 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 254566 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 254570 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 254573 1 T . scaffold3011 ScafM SNP 0050.scaffold00177 254621 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 254623 3 ... ATG scaffold3011 Both SNP 0050.scaffold00177 254640 1 C A scaffold3011 Both SNP 0050.scaffold00177 254729 1 G C scaffold3011 Both SNP 0050.scaffold00177 254738 1 A G scaffold3011 Both SNP 0050.scaffold00177 254781 1 G A scaffold3011 Both SNP 0050.scaffold00177 254818 1 C T scaffold3011 Both SNP 0050.scaffold00177 254848 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 254874 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 254928 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 254944 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 254949 1 T C scaffold3011 ReadM SNP 0050.scaffold00177 255776 1 C T - ReadM INDEL 0050.scaffold00177 256284 1 . A - ReadM SNP 0050.scaffold00177 256336 1 A G - ReadM SNP 0050.scaffold00177 256553 1 G A - ReadM SNP 0050.scaffold00177 256586 1 G T - ReadM SNP 0050.scaffold00177 256666 1 T C - ReadM SNP 0050.scaffold00177 256773 1 A G - ReadM SNP 0050.scaffold00177 256985 1 C A - ReadM SNP 0050.scaffold00177 257088 1 A G - ReadM SNP 0050.scaffold00177 257184 1 T G - ReadM SNP 0050.scaffold00177 257191 1 T C - ReadM SNP 0050.scaffold00177 257212 1 A G - ReadM SNP 0050.scaffold00177 257640 1 A G - ReadM SNP 0050.scaffold00177 257648 1 G A - ReadM SNP 0050.scaffold00177 257692 1 G A - ReadM SNP 0050.scaffold00177 257723 1 T C - ReadM SNP 0050.scaffold00177 257812 1 G A - ReadM SNP 0050.scaffold00177 257819 1 G T - ReadM SNP 0050.scaffold00177 258054 1 T G - ReadM SNP 0050.scaffold00177 258069 1 A G - ReadM SNP 0050.scaffold00177 258112 1 C T - ReadM SNP 0050.scaffold00177 258208 1 G T - ReadM SNP 0050.scaffold00177 258223 1 T C - ReadM SNP 0050.scaffold00177 258252 1 C T - ReadM SNP 0050.scaffold00177 258301 1 A G - ReadM INDEL 0050.scaffold00177 258537 1 . T - ReadM SNP 0050.scaffold00177 258563 1 T C - ReadM SNP 0050.scaffold00177 258568 1 T C - ReadM SNP 0050.scaffold00177 258705 1 T G - ReadM SNP 0050.scaffold00177 258775 1 C T - ReadM SNP 0050.scaffold00177 258838 1 G A - ReadM SNP 0050.scaffold00177 258864 1 T C - ReadM SNP 0050.scaffold00177 258900 1 T C - ReadM SNP 0050.scaffold00177 259007 1 G A - ReadM SNP 0050.scaffold00177 259026 1 A T - ScafM SNP 0050.scaffold00177 259092 1 T C scaffold3011 Both SNP 0050.scaffold00177 259120 1 G T scaffold3011 Both SNP 0050.scaffold00177 259134 1 G A scaffold3011 Both SNP 0050.scaffold00177 259181 1 A G scaffold3011 ReadM SNP 0050.scaffold00177 259200 1 G A - ReadM SNP 0050.scaffold00177 259756 1 G A - ReadM SNP 0050.scaffold00177 259760 1 G A - ReadM SNP 0050.scaffold00177 259806 1 T A - ReadM SNP 0050.scaffold00177 259827 1 C T - ReadM SNP 0050.scaffold00177 259857 1 C G - ReadM SNP 0050.scaffold00177 259881 1 A C - ReadM SNP 0050.scaffold00177 260153 1 A G - ReadM SNP 0050.scaffold00177 260166 1 A C - ReadM SNP 0050.scaffold00177 260278 1 A G - ReadM SNP 0050.scaffold00177 260303 1 G A - ReadM SNP 0050.scaffold00177 260310 1 T C - ReadM SNP 0050.scaffold00177 260531 1 T A - ReadM INDEL 0050.scaffold00177 260562 2 AA .. - ReadM SNP 0050.scaffold00177 260592 1 T C - ReadM SNP 0050.scaffold00177 260705 1 T C - ReadM SNP 0050.scaffold00177 260728 1 A G - ReadM SNP 0050.scaffold00177 260817 1 T C - ReadM SNP 0050.scaffold00177 260848 1 C T - ReadM SNP 0050.scaffold00177 260923 1 A G - ReadM SNP 0050.scaffold00177 261058 1 C T - ReadM SNP 0050.scaffold00177 261079 1 T G - ReadM SNP 0050.scaffold00177 261182 1 C G - ReadM SNP 0050.scaffold00177 261276 1 G C - ReadM SNP 0050.scaffold00177 261284 1 A T - ReadM SNP 0050.scaffold00177 261383 1 T C - ReadM SNP 0050.scaffold00177 261492 1 C A - ReadM SNP 0050.scaffold00177 261502 1 T A - ReadM SNP 0050.scaffold00177 261537 1 T A - ReadM SNP 0050.scaffold00177 261553 1 T G - ReadM SNP 0050.scaffold00177 261631 1 A C - ReadM SNP 0050.scaffold00177 261680 1 G C - ReadM SNP 0050.scaffold00177 261696 1 C G - ReadM SNP 0050.scaffold00177 261715 1 T C - ReadM SNP 0050.scaffold00177 261851 1 A G - ReadM SNP 0050.scaffold00177 261913 1 T C - ReadM SNP 0050.scaffold00177 261992 1 G T - ReadM SNP 0050.scaffold00177 261997 1 T C - ReadM SNP 0050.scaffold00177 262003 1 T G - ScafM SNP 0050.scaffold00177 262213 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 262227 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 262229 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 262278 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 262287 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 262334 1 A T scaffold3011 Both SNP 0050.scaffold00177 262373 1 G A scaffold3011 Both SNP 0050.scaffold00177 262386 1 T C scaffold3011 Both SNP 0050.scaffold00177 262559 1 T A scaffold3011 Both SNP 0050.scaffold00177 262588 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 262607 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 262665 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 263330 3 TAC ... scaffold3011 Both SNP 0050.scaffold00177 263551 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 263673 9 ......... ATATACTTC scaffold3011 ScafM SNP 0050.scaffold00177 263740 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 263875 8 ACTACTGG ........ scaffold3011 ScafM SNP 0050.scaffold00177 263925 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 263951 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 264061 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 264094 4 AAAA .... scaffold3011 ScafM INDEL 0050.scaffold00177 264113 2 CT .A scaffold3011 ScafM SNP 0050.scaffold00177 264119 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 264812 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 264822 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 264888 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 264970 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 264993 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 264998 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 265059 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 265061 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 265094 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 265105 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 265160 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 265164 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 265191 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 267171 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 267175 2 TC .A scaffold3011 ScafM SNP 0050.scaffold00177 267180 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 267185 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 267211 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 267499 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 267541 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 267547 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 267550 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 267572 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 267593 1 A C scaffold3011 ScafM INDEL 0050.scaffold00177 267619 9 ......... ATACTAATT scaffold3011 ScafM SNP 0050.scaffold00177 267637 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 267653 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 267662 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 267885 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 267887 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 267928 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 267943 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 267950 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 267973 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 268000 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 268018 3 ... AGA scaffold3011 Both SNP 0050.scaffold00177 268173 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 268203 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 268492 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 268495 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 268524 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 268549 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 268556 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 268593 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 268975 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 268998 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 269004 1 C T scaffold3011 ScafM INDEL 0050.scaffold00177 269013 5 ..... CGAAA scaffold3011 Both SNP 0050.scaffold00177 269111 1 T C scaffold3011 Both INDEL 0050.scaffold00177 269154 1 . T scaffold3011 ReadM SNP 0050.scaffold00177 269179 1 G C - ScafM SNP 0050.scaffold00177 269334 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 269370 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 269384 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 269405 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 269441 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 269446 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 269453 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 269460 2 .. AG scaffold3011 ScafM INDEL 0050.scaffold00177 269465 2 .. TG scaffold3011 ScafM SNP 0050.scaffold00177 269475 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 269477 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 269504 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 269522 1 T C scaffold3011 Both INDEL 0050.scaffold00177 269558 1 A . scaffold3011 Both SNP 0050.scaffold00177 269567 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 269624 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 269643 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 269651 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 269656 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 269671 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 269676 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 269680 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 269720 2 TG CA scaffold3011 ScafM SNP 0050.scaffold00177 269724 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 269785 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 269806 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 269811 2 .. AA scaffold3011 ScafM SNP 0050.scaffold00177 269818 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 269825 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 269853 2 TA .. scaffold3011 ScafM SNP 0050.scaffold00177 269870 1 A G scaffold3011 ReadM INDEL 0050.scaffold00177 269892 1 A . - ScafM INDEL 0050.scaffold00177 269892 2 AG .T scaffold3011 ReadM SNP 0050.scaffold00177 269936 1 G C - ReadM SNP 0050.scaffold00177 270008 1 T C - ReadM SNP 0050.scaffold00177 270015 1 A T - ReadM SNP 0050.scaffold00177 270081 1 A T - ReadM SNP 0050.scaffold00177 270236 1 A G - ReadM SNP 0050.scaffold00177 270259 1 C T - ReadM SNP 0050.scaffold00177 270288 1 G A - ReadM SNP 0050.scaffold00177 270417 1 G A - ReadM SNP 0050.scaffold00177 270436 1 A G - ReadM SNP 0050.scaffold00177 270682 1 T A - ReadM SNP 0050.scaffold00177 270701 1 A G - ReadM SNP 0050.scaffold00177 270773 1 A G - ReadM SNP 0050.scaffold00177 270975 1 G T - ReadM SNP 0050.scaffold00177 271039 1 G A - ReadM SNP 0050.scaffold00177 271073 1 A T - ReadM SNP 0050.scaffold00177 271467 1 C T - ReadM SNP 0050.scaffold00177 271757 1 A T - ReadM SNP 0050.scaffold00177 271791 1 G A - ReadM SNP 0050.scaffold00177 271807 1 C T - ReadM SNP 0050.scaffold00177 272216 1 C T - ReadM SNP 0050.scaffold00177 272235 1 A G - ReadM SNP 0050.scaffold00177 272473 1 G T - ReadM SNP 0050.scaffold00177 272698 1 C T - ReadM SNP 0050.scaffold00177 272719 1 C T - ReadM SNP 0050.scaffold00177 272737 1 A G - ReadM SNP 0050.scaffold00177 272799 1 A G - ReadM SNP 0050.scaffold00177 272896 1 G A - ReadM SNP 0050.scaffold00177 272929 1 T C - ReadM INDEL 0050.scaffold00177 272931 1 . A - ReadM SNP 0050.scaffold00177 273054 1 T A - ReadM SNP 0050.scaffold00177 273082 1 C T - ReadM INDEL 0050.scaffold00177 273086 1 . G - ReadM SNP 0050.scaffold00177 273160 1 T A - ReadM SNP 0050.scaffold00177 273165 1 T A - ReadM INDEL 0050.scaffold00177 273205 1 A . - ReadM SNP 0050.scaffold00177 273533 1 G A - ReadM SNP 0050.scaffold00177 273606 1 A G - ReadM SNP 0050.scaffold00177 274054 1 A G - ReadM INDEL 0050.scaffold00177 274086 2 TT .. - ScafM INDEL 0050.scaffold00177 277477 2 AA .. scaffold3011 ScafM SNP 0050.scaffold00177 277517 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 277519 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 277542 1 G T scaffold3011 ReadM SNP 0050.scaffold00177 277889 1 G A - ScafM SNP 0050.scaffold00177 278050 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 278060 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 279224 2 CG GA scaffold3011 ScafM INDEL 0050.scaffold00177 279233 1 G . scaffold3011 ScafM SNP 0050.scaffold00177 279296 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 279320 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 279327 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 279333 4 .... GGTC scaffold3011 ScafM SNP 0050.scaffold00177 279344 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 279376 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 279381 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 279387 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 279422 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 279428 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 279455 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 279465 1 T G scaffold3011 ScafM INDEL 0050.scaffold00177 279606 1 G . scaffold3011 ScafM SNP 0050.scaffold00177 279685 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 279713 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 279733 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 279779 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 279798 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 279843 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 279866 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 280237 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 280256 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 280279 6 ATTCTG ...... scaffold3011 ScafM INDEL 0050.scaffold00177 280286 2 AC .. scaffold3011 ScafM INDEL 0050.scaffold00177 280333 2 .. TA scaffold3011 ReadM SNP 0050.scaffold00177 280488 1 T A - ReadM SNP 0050.scaffold00177 280499 1 T C - ReadM SNP 0050.scaffold00177 280516 1 A G - Both INDEL 0050.scaffold00177 280632 1 A . scaffold3011 ReadM SNP 0050.scaffold00177 280829 1 A G - ScafM INDEL 0050.scaffold00177 280928 3 ... AAA scaffold3011 Both SNP 0050.scaffold00177 280976 1 T G scaffold3011 ReadM SNP 0050.scaffold00177 281037 1 T C - ReadM SNP 0050.scaffold00177 281178 1 A G - ReadM SNP 0050.scaffold00177 281402 1 C T - ReadM SNP 0050.scaffold00177 281493 1 C T - ReadM SNP 0050.scaffold00177 281556 1 T G - ReadM SNP 0050.scaffold00177 281661 1 T C - ReadM INDEL 0050.scaffold00177 281727 1 A . - ReadM SNP 0050.scaffold00177 281953 1 G A - ReadM SNP 0050.scaffold00177 281975 1 G A - Both SNP 0050.scaffold00177 282145 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 282221 1 A C scaffold3011 ScafM INDEL 0050.scaffold00177 282259 11 CAATCAATTTC ........... scaffold3011 Both SNP 0050.scaffold00177 282424 1 A T scaffold3011 ReadM SNP 0050.scaffold00177 282450 1 T C - ReadM SNP 0050.scaffold00177 282521 1 T C - ReadM SNP 0050.scaffold00177 282629 1 A T - ReadM SNP 0050.scaffold00177 282639 1 G A - ReadM SNP 0050.scaffold00177 282673 1 G A - ReadM SNP 0050.scaffold00177 282899 1 A G - ReadM SNP 0050.scaffold00177 282927 1 C T - ReadM SNP 0050.scaffold00177 283083 1 T C - ReadM SNP 0050.scaffold00177 283326 1 C T - ReadM SNP 0050.scaffold00177 283481 1 T C - ReadM SNP 0050.scaffold00177 283565 1 C A - ReadM SNP 0050.scaffold00177 283630 1 A C - ReadM SNP 0050.scaffold00177 283703 1 T C - ReadM SNP 0050.scaffold00177 283755 1 C A - ReadM SNP 0050.scaffold00177 283763 1 A G - ReadM SNP 0050.scaffold00177 283808 1 C T - ScafM INDEL 0050.scaffold00177 283884 2 TA .. scaffold3011 ScafM SNP 0050.scaffold00177 283899 1 A C scaffold3011 Both SNP 0050.scaffold00177 283961 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 284176 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 284254 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 284331 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 284378 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 284552 1 T . scaffold3011 ScafM SNP 0050.scaffold00177 284593 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 285306 1 A T scaffold3011 Both SNP 0050.scaffold00177 285505 1 C T scaffold3011 Both SNP 0050.scaffold00177 285554 1 G T scaffold3011 Both SNP 0050.scaffold00177 285588 1 T A scaffold3011 ReadM SNP 0050.scaffold00177 285681 1 T C - ReadM SNP 0050.scaffold00177 285753 1 G A - ReadM SNP 0050.scaffold00177 285774 1 G A - ScafM SNP 0050.scaffold00177 285848 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 285858 2 TT GA scaffold3011 ScafM INDEL 0050.scaffold00177 285904 3 ... TTA scaffold3011 Both SNP 0050.scaffold00177 285970 1 T C scaffold3011 Both SNP 0050.scaffold00177 286024 1 T C scaffold3011 Both INDEL 0050.scaffold00177 286217 1 A . scaffold3011 Both SNP 0050.scaffold00177 286317 1 G C scaffold3011 Both SNP 0050.scaffold00177 286348 1 A G scaffold3011 Both SNP 0050.scaffold00177 286429 1 T G scaffold3011 Both SNP 0050.scaffold00177 286687 1 C T scaffold3011 Both SNP 0050.scaffold00177 287001 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 287097 2 GC TG scaffold3011 ScafM INDEL 0050.scaffold00177 287105 4 CTCG .... scaffold3011 Both SNP 0050.scaffold00177 287216 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 287302 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 287305 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 287311 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 287439 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 287460 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 287506 2 CT TA scaffold3011 ScafM SNP 0050.scaffold00177 287522 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 287526 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 287528 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 287546 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 287554 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 287557 1 . G scaffold3011 ScafM SNP 0050.scaffold00177 287561 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 287569 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 287587 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 287599 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 287606 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 287615 3 ... AAA scaffold3011 ScafM SNP 0050.scaffold00177 287618 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 287624 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 287634 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 287638 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 287645 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 287648 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 287675 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 287724 1 C T scaffold3011 Both SNP 0050.scaffold00177 287899 1 C A scaffold3011 ReadM INDEL 0050.scaffold00177 287960 1 A . - Both SNP 0050.scaffold00177 288063 1 G C scaffold3011 Both SNP 0050.scaffold00177 288067 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 288465 1 A T scaffold3011 ScafM INDEL 0050.scaffold00177 288471 1 . C scaffold3011 ScafM SNP 0050.scaffold00177 289241 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 289395 24 ........................ TATGACTCTTTTAACATTTGGAAA scaffold3011 ScafM SNP 0050.scaffold00177 289499 1 C T scaffold3011 ReadM SNP 0050.scaffold00177 290143 1 G C - ReadM SNP 0050.scaffold00177 290378 1 T A - ReadM SNP 0050.scaffold00177 290458 1 C A - ReadM SNP 0050.scaffold00177 290723 1 A C - ReadM SNP 0050.scaffold00177 290819 1 T C - ReadM SNP 0050.scaffold00177 290927 1 T G - ReadM SNP 0050.scaffold00177 290973 1 T C - ReadM SNP 0050.scaffold00177 291165 1 T C - ReadM SNP 0050.scaffold00177 291583 1 G A - ReadM SNP 0050.scaffold00177 291834 1 T C - ReadM SNP 0050.scaffold00177 291862 1 T C - ScafM SNP 0050.scaffold00177 291913 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 291991 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 292008 1 T C scaffold3011 Both SNP 0050.scaffold00177 292059 1 C G scaffold3011 ScafM INDEL 0050.scaffold00177 292157 2 GT .. scaffold3011 ReadM SNP 0050.scaffold00177 292331 1 G A - Both INDEL 0050.scaffold00177 292364 1 A . scaffold3011 Both SNP 0050.scaffold00177 292670 1 C T scaffold3011 Both SNP 0050.scaffold00177 292673 1 C T scaffold3011 Both INDEL 0050.scaffold00177 292750 1 . T scaffold3011 ScafM SNP 0050.scaffold00177 292876 3 CAA TGG scaffold3011 ScafM SNP 0050.scaffold00177 292880 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 292900 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 292946 1 T A scaffold3011 Both SNP 0050.scaffold00177 293031 1 A T scaffold3011 ReadM SNP 0050.scaffold00177 293077 1 A G - ReadM SNP 0050.scaffold00177 293094 1 A G - ScafM SNP 0050.scaffold00177 293272 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 293294 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 293532 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 293705 1 A T scaffold3011 ScafM INDEL 0050.scaffold00177 294988 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 295011 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 295032 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 295137 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 295237 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 295347 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 295373 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 296364 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 296377 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 296411 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 296414 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 296420 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 296474 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 296503 2 GG CC scaffold3011 ScafM SNP 0050.scaffold00177 296507 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 296599 2 TG .. scaffold3011 ScafM INDEL 0050.scaffold00177 296610 2 CA .. scaffold3011 ScafM SNP 0050.scaffold00177 296634 1 A T scaffold3011 ScafM INDEL 0050.scaffold00177 296637 1 T . scaffold3011 ScafM SNP 0050.scaffold00177 296644 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 296650 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 296673 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 296834 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 296847 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 296852 2 CC AA scaffold3011 ScafM SNP 0050.scaffold00177 296857 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 296869 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 297433 2 GC AT scaffold3011 ScafM SNP 0050.scaffold00177 297530 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 297559 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 297565 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 297578 1 . T scaffold3011 ScafM INDEL 0050.scaffold00177 297589 4 .... TAGC scaffold3011 ScafM SNP 0050.scaffold00177 297615 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 297645 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 297650 1 G A scaffold3011 Both SNP 0050.scaffold00177 297684 1 C G scaffold3011 Both SNP 0050.scaffold00177 297687 1 C T scaffold3011 Both SNP 0050.scaffold00177 297806 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 297918 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 297967 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 297969 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 298044 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 298101 6 TTTTTT ...... scaffold3011 ScafM SNP 0050.scaffold00177 298180 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 298352 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 298369 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 298399 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 298420 7 TCAAGTT ....... scaffold3011 ScafM INDEL 0050.scaffold00177 298470 1 C . scaffold3011 ScafM SNP 0050.scaffold00177 298491 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 298494 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 298507 2 TA AG scaffold3011 ScafM SNP 0050.scaffold00177 298513 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 298522 2 CT TA scaffold3011 ScafM SNP 0050.scaffold00177 298530 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 298536 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 298539 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 298542 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 298546 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 300296 1 C T scaffold3011 ScafM INDEL 0050.scaffold00177 300328 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 300332 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 300336 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 300348 2 CT GG scaffold3011 ScafM SNP 0050.scaffold00177 300402 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 300489 1 T A scaffold3011 Both SNP 0050.scaffold00177 300665 1 A T scaffold3011 Both SNP 0050.scaffold00177 300731 1 C T scaffold3011 Both SNP 0050.scaffold00177 300801 1 C T scaffold3011 Both INDEL 0050.scaffold00177 301007 2 .. TA scaffold3011 ScafM INDEL 0050.scaffold00177 301065 3 ... TTC scaffold3011 ScafM SNP 0050.scaffold00177 301098 1 C T scaffold3011 Both SNP 0050.scaffold00177 301139 1 C T scaffold3011 Both SNP 0050.scaffold00177 301181 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 301259 1 C T - ReadM SNP 0050.scaffold00177 301271 1 T C - ReadM SNP 0050.scaffold00177 301436 1 A T - ReadM SNP 0050.scaffold00177 301492 1 A T - ReadM SNP 0050.scaffold00177 301561 1 G A - ReadM SNP 0050.scaffold00177 301903 1 G A - ScafM INDEL 0050.scaffold00177 301930 1 . T scaffold3011 ScafM INDEL 0050.scaffold00177 301966 3 ... TTT scaffold3011 Both SNP 0050.scaffold00177 302028 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 302134 7 ACTTTAC ....... scaffold3011 ScafM SNP 0050.scaffold00177 302144 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 302151 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 302179 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 302197 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 302212 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 302219 1 C A scaffold3011 ScafM INDEL 0050.scaffold00177 302222 3 ... TGG scaffold3011 ScafM SNP 0050.scaffold00177 302238 1 C T scaffold3011 ReadM SNP 0050.scaffold00177 302411 1 T A - ReadM SNP 0050.scaffold00177 302425 1 A G - ReadM SNP 0050.scaffold00177 302511 1 T C - Both SNP 0050.scaffold00177 302648 1 C G scaffold3011 Both SNP 0050.scaffold00177 302651 1 A G scaffold3011 Both SNP 0050.scaffold00177 302776 1 G A scaffold3011 Both SNP 0050.scaffold00177 302840 1 T C scaffold3011 Both SNP 0050.scaffold00177 302842 1 A G scaffold3011 Both SNP 0050.scaffold00177 302882 1 A G scaffold3011 Both SNP 0050.scaffold00177 302922 1 C T scaffold3011 ScafM INDEL 0050.scaffold00177 303043 11 ........... CTGAGATCTTT scaffold3011 ScafM SNP 0050.scaffold00177 303056 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 303108 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 303144 1 T C scaffold3011 ScafM INDEL 0050.scaffold00177 303210 1 . A scaffold3011 ScafM SNP 0050.scaffold00177 303218 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 303266 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 309099 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 309117 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 309122 1 . T scaffold3011 ScafM SNP 0050.scaffold00177 309161 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 309186 1 C T scaffold3011 ScafM INDEL 0050.scaffold00177 309578 7 GTCCTAA ....... scaffold3011 Both SNP 0050.scaffold00177 309677 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 309692 1 C T scaffold3011 Both SNP 0050.scaffold00177 310583 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 310866 2 AT CA scaffold3011 ScafM SNP 0050.scaffold00177 310888 1 A G scaffold3011 Both SNP 0050.scaffold00177 311017 1 T A scaffold3011 Both INDEL 0050.scaffold00177 311032 1 . A scaffold3011 Both SNP 0050.scaffold00177 311064 1 T C scaffold3011 Both SNP 0050.scaffold00177 311072 1 T C scaffold3011 Both SNP 0050.scaffold00177 311166 1 G T scaffold3011 ReadM SNP 0050.scaffold00177 311182 1 C T - ReadM SNP 0050.scaffold00177 311307 1 C A - ReadM SNP 0050.scaffold00177 311316 1 T A - ReadM INDEL 0050.scaffold00177 311373 3 ... ATT - Both SNP 0050.scaffold00177 311442 1 G A scaffold3011 Both SNP 0050.scaffold00177 311486 1 A T scaffold3011 Both INDEL 0050.scaffold00177 311624 1 . A scaffold3011 Both SNP 0050.scaffold00177 311639 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 311664 1 T A scaffold3011 ScafM SNP 0050.scaffold00177 311672 1 T A scaffold3011 ScafM INDEL 0050.scaffold00177 311676 5 ..... AAATT scaffold3011 ScafM SNP 0050.scaffold00177 311697 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 311708 1 G A scaffold3011 ScafM INDEL 0050.scaffold00177 311757 3 ACT ... scaffold3011 ScafM INDEL 0050.scaffold00177 311761 2 AA .. scaffold3011 ScafM SNP 0050.scaffold00177 311764 1 C T scaffold3011 ScafM INDEL 0050.scaffold00177 311770 2 .. AA scaffold3011 ScafM INDEL 0050.scaffold00177 312188 3 TTT ... scaffold3011 Both SNP 0050.scaffold00177 312346 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 312393 3 ... CTG scaffold3011 ScafM SNP 0050.scaffold00177 312394 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 312403 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 312417 1 G C scaffold3011 ScafM SNP 0050.scaffold00177 312420 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 312422 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 312459 1 G A scaffold3011 ReadM SNP 0050.scaffold00177 312601 1 G A - Both SNP 0050.scaffold00177 312640 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 312654 1 T G scaffold3011 Both SNP 0050.scaffold00177 312703 1 A G scaffold3011 ScafM INDEL 0050.scaffold00177 312754 2 AG .. scaffold3011 ScafM SNP 0050.scaffold00177 312764 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 312807 3 ACG ... scaffold3011 ScafM INDEL 0050.scaffold00177 312812 3 CCC ... scaffold3011 ScafM SNP 0050.scaffold00177 312816 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 312861 1 T G scaffold3011 ScafM INDEL 0050.scaffold00177 312869 4 .... ATAT scaffold3011 Both INDEL 0050.scaffold00177 312896 1 C . scaffold3011 Both SNP 0050.scaffold00177 312943 1 A T scaffold3011 Both SNP 0050.scaffold00177 313015 1 G A scaffold3011 ScafM SNP 0050.scaffold00177 313069 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 313074 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 313079 1 T C scaffold3011 ReadM SNP 0050.scaffold00177 313172 1 A G - ReadM SNP 0050.scaffold00177 313186 1 C A - ReadM SNP 0050.scaffold00177 313213 1 G A - ReadM SNP 0050.scaffold00177 313265 1 T C - Both SNP 0050.scaffold00177 313327 1 G A scaffold3011 Both SNP 0050.scaffold00177 313334 1 G A scaffold3011 Both SNP 0050.scaffold00177 313388 1 T C scaffold3011 ReadM SNP 0050.scaffold00177 313507 1 T C - ReadM SNP 0050.scaffold00177 313533 1 C T - ReadM INDEL 0050.scaffold00177 313785 1 T . - ReadM SNP 0050.scaffold00177 313810 1 G A - ReadM SNP 0050.scaffold00177 313867 1 A G - ReadM SNP 0050.scaffold00177 313881 1 A T - ReadM SNP 0050.scaffold00177 313921 1 C T - ReadM SNP 0050.scaffold00177 313945 1 T A - ReadM SNP 0050.scaffold00177 314010 1 T C - ReadM SNP 0050.scaffold00177 314021 1 T C - ReadM INDEL 0050.scaffold00177 314103 1 A . - ReadM INDEL 0050.scaffold00177 314373 1 C . - ReadM SNP 0050.scaffold00177 314436 1 A C - ReadM SNP 0050.scaffold00177 314445 1 T C - ReadM INDEL 0050.scaffold00177 314666 2 .. GA - Both SNP 0050.scaffold00177 314911 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 315026 2 CC TG scaffold3011 ScafM SNP 0050.scaffold00177 315066 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 315077 1 G T scaffold3011 ScafM SNP 0050.scaffold00177 315150 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 315188 1 A T scaffold3011 ScafM SNP 0050.scaffold00177 315193 1 A G scaffold3011 ScafM SNP 0050.scaffold00177 315198 1 C T scaffold3011 ScafM SNP 0050.scaffold00177 315206 1 T G scaffold3011 ScafM SNP 0050.scaffold00177 315266 1 C A scaffold3011 ScafM SNP 0050.scaffold00177 315273 1 A C scaffold3011 ScafM SNP 0050.scaffold00177 315277 1 T C scaffold3011 ScafM SNP 0050.scaffold00177 315279 1 C G scaffold3011 ScafM SNP 0050.scaffold00177 315285 1 G C scaffold3011 ScafM INDEL 0050.scaffold00177 315347 2 .. AT scaffold3011 ScafM INDEL 0050.scaffold00177 321294 1 . A scaffold32969 ScafM INDEL 0050.scaffold00177 321380 1 . T scaffold32969 ScafM INDEL 0050.scaffold00177 321381 4 .... TTTT scaffold32969 ScafM INDEL 0050.scaffold00177 321387 2 .. TT scaffold32969 ScafM SNP 0050.scaffold00177 321480 1 C A scaffold32969 ScafM SNP 0050.scaffold00177 321495 1 C A scaffold32969 ScafM SNP 0050.scaffold00177 321503 1 A C scaffold32969 ScafM SNP 0050.scaffold00177 321514 2 AG CA scaffold32969 ScafM SNP 0050.scaffold00177 321530 1 A C scaffold32969 ScafM SNP 0050.scaffold00177 321542 1 C A scaffold32969 ScafM SNP 0050.scaffold00177 321551 1 A C scaffold32969 ScafM SNP 0050.scaffold00177 321641 1 C G scaffold17607 ScafM SNP 0050.scaffold00177 321676 1 C A scaffold17607 ScafM SNP 0050.scaffold00177 321680 1 T C scaffold17607 ScafM SNP 0050.scaffold00177 321689 1 C T scaffold17607 ScafM SNP 0050.scaffold00177 321693 1 C G scaffold17607 ScafM SNP 0050.scaffold00177 339404 1 C G scaffold11733 ScafM SNP 0050.scaffold00177 339624 1 G T scaffold11733 ScafM INDEL 0050.scaffold00177 340087 1 . A scaffold11733 ScafM SNP 0050.scaffold00177 346170 1 C G scaffold19496 ScafM SNP 0050.scaffold00177 346193 1 T A scaffold19496 ScafM SNP 0050.scaffold00177 346485 1 T A scaffold19496 ScafM SNP 0050.scaffold00177 350111 1 T A scaffold4560 ScafM SNP 0050.scaffold00177 352191 1 G A scaffold8972 ScafM SNP 0050.scaffold00177 372767 1 T A scaffold7577 ScafM SNP 0050.scaffold00177 378492 1 C T scaffold7577 ScafM INDEL 0050.scaffold00177 379102 5 ..... GGGGG scaffold7577 ScafM INDEL 0050.scaffold00177 379104 1 . A scaffold7577 ScafM SNP 0050.scaffold00177 379131 1 A G scaffold7577 ScafM SNP 0050.scaffold00177 379134 1 G A scaffold7577 ScafM SNP 0050.scaffold00177 385681 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 385700 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 385748 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 385764 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 385766 1 T C scaffold4088 ScafM SNP 0050.scaffold00177 385772 1 T C scaffold4088 ScafM SNP 0050.scaffold00177 385782 1 T C scaffold4088 ScafM SNP 0050.scaffold00177 385835 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 385842 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 385864 2 GG AA scaffold4088 ScafM SNP 0050.scaffold00177 385870 1 T A scaffold4088 ScafM SNP 0050.scaffold00177 385876 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 385881 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 385885 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 385889 1 T A scaffold4088 ScafM SNP 0050.scaffold00177 385892 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 385915 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 385963 1 G T scaffold4088 ScafM SNP 0050.scaffold00177 385970 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 385976 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 385979 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 385981 1 T G scaffold4088 ScafM SNP 0050.scaffold00177 385993 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386002 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386006 1 T G scaffold4088 ScafM SNP 0050.scaffold00177 386042 1 C A scaffold4088 ScafM SNP 0050.scaffold00177 386051 1 T A scaffold4088 ScafM SNP 0050.scaffold00177 386058 1 T A scaffold4088 ScafM SNP 0050.scaffold00177 386060 1 T G scaffold4088 ScafM SNP 0050.scaffold00177 386072 1 C A scaffold4088 ScafM SNP 0050.scaffold00177 386081 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386092 1 A G scaffold4088 ScafM INDEL 0050.scaffold00177 386109 2 GT .A scaffold4088 ScafM SNP 0050.scaffold00177 386132 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386138 1 T A scaffold4088 ScafM SNP 0050.scaffold00177 386164 1 T G scaffold4088 ScafM SNP 0050.scaffold00177 386198 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386239 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 386261 1 T C scaffold4088 ScafM SNP 0050.scaffold00177 386264 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386270 1 A G scaffold4088 ScafM SNP 0050.scaffold00177 386273 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 386295 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386313 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386337 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386345 1 G T scaffold4088 ScafM SNP 0050.scaffold00177 386347 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 386407 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 386441 1 C G scaffold4088 ScafM SNP 0050.scaffold00177 386446 1 C A scaffold4088 ScafM SNP 0050.scaffold00177 386457 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386484 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386498 1 C A scaffold4088 ScafM SNP 0050.scaffold00177 386510 1 G A scaffold4088 ScafM INDEL 0050.scaffold00177 386555 1 G . scaffold4088 ScafM SNP 0050.scaffold00177 386564 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 386583 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386637 1 A C scaffold4088 ScafM SNP 0050.scaffold00177 386671 1 T G scaffold4088 ScafM SNP 0050.scaffold00177 386687 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386699 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386719 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 386734 1 C T scaffold4088 ScafM SNP 0050.scaffold00177 386744 1 G A scaffold4088 ScafM SNP 0050.scaffold00177 410225 1 A G scaffold20203 ScafM INDEL 0050.scaffold00177 415071 7 TTAGTTC ....... scaffold2806 ScafM INDEL 0050.scaffold00177 415080 6 TATTTT ...... scaffold2806 ScafM SNP 0050.scaffold00177 415105 1 G T scaffold2806 ScafM SNP 0050.scaffold00177 415123 1 T C scaffold2806 ScafM SNP 0050.scaffold00177 415126 1 G A scaffold2806 ScafM SNP 0050.scaffold00177 415139 1 T A scaffold2806 ScafM SNP 0050.scaffold00177 415170 1 A C scaffold2806 ScafM SNP 0050.scaffold00177 415192 1 G A scaffold2806 ScafM INDEL 0050.scaffold00177 415238 1 . A scaffold2806 ScafM SNP 0050.scaffold00177 417581 1 A G scaffold21407 ScafM SNP 0050.scaffold00177 417614 1 C G scaffold21407 ScafM SNP 0050.scaffold00177 417694 1 A C scaffold21407 ScafM INDEL 0050.scaffold00177 417776 1 A . scaffold21407 ScafM INDEL 0050.scaffold00177 417789 3 ... AGG scaffold21407 ScafM SNP 0050.scaffold00177 417799 1 A G scaffold21407 ScafM SNP 0050.scaffold00177 417859 1 A G scaffold21407 ScafM SNP 0050.scaffold00177 417865 1 A G scaffold21407 ScafM SNP 0050.scaffold00177 417875 1 C G scaffold21407 ScafM SNP 0050.scaffold00177 417885 1 C T scaffold21407 ScafM SNP 0050.scaffold00177 418522 1 T C scaffold3198 ScafM INDEL 0050.scaffold00177 418980 4 .... CTAG scaffold3198 ScafM INDEL 0050.scaffold00177 419119 2 .. AA scaffold3198 ScafM SNP 0050.scaffold00177 419394 1 T G scaffold3198 ScafM SNP 0050.scaffold00177 419939 1 G A scaffold3198 ScafM INDEL 0050.scaffold00177 427445 1 . A scaffold3198 ScafM SNP 0050.scaffold00177 443458 1 A G scaffold17331 ScafM SNP 0050.scaffold00177 443478 1 T C scaffold17331 ScafM SNP 0050.scaffold00177 443507 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443515 1 A G scaffold17331 ScafM SNP 0050.scaffold00177 443528 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443546 1 T C scaffold17331 ScafM SNP 0050.scaffold00177 443548 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443564 1 A G scaffold17331 ScafM SNP 0050.scaffold00177 443583 1 C G scaffold17331 ScafM SNP 0050.scaffold00177 443585 1 A G scaffold17331 ScafM SNP 0050.scaffold00177 443592 1 C T scaffold17331 ScafM SNP 0050.scaffold00177 443595 1 C G scaffold17331 ScafM SNP 0050.scaffold00177 443598 1 T G scaffold17331 ScafM SNP 0050.scaffold00177 443602 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443639 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443663 1 A T scaffold17331 ScafM SNP 0050.scaffold00177 443672 1 C T scaffold17331 ScafM SNP 0050.scaffold00177 443683 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443696 1 T G scaffold17331 ScafM SNP 0050.scaffold00177 443701 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443719 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443721 1 G C scaffold17331 ScafM SNP 0050.scaffold00177 443749 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443756 1 T A scaffold17331 ScafM SNP 0050.scaffold00177 443760 1 C T scaffold17331 ScafM SNP 0050.scaffold00177 443767 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443769 2 AA TG scaffold17331 ScafM SNP 0050.scaffold00177 443776 1 C G scaffold17331 ScafM SNP 0050.scaffold00177 443786 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443800 3 AGC GAT scaffold17331 ScafM SNP 0050.scaffold00177 443866 1 G T scaffold17331 ScafM SNP 0050.scaffold00177 443870 1 C A scaffold17331 ScafM SNP 0050.scaffold00177 443876 1 G A scaffold17331 ScafM SNP 0050.scaffold00177 443878 1 C G scaffold17331 ScafM SNP 0050.scaffold00177 443883 1 C T scaffold17331 ScafM SNP 0050.scaffold00177 443889 1 A G scaffold17331 ScafM SNP 0050.scaffold00177 478658 1 G T scaffold15549 ScafM SNP 0050.scaffold00177 478880 1 G A scaffold15549 ScafM INDEL 0050.scaffold00177 479026 2 .. AA scaffold15549 ScafM SNP 0050.scaffold00177 479182 1 A G scaffold15549 ScafM SNP 0050.scaffold00177 479249 1 G A scaffold15549 ScafM SNP 0050.scaffold00177 479284 1 C T scaffold15549 ScafM INDEL 0050.scaffold00177 487789 1 . T scaffold3198 ScafM SNP 0050.scaffold00177 511854 1 C G scaffold3198 ScafM SNP 0050.scaffold00177 535911 1 A G scaffold3198 ScafM INDEL 0050.scaffold00177 538658 1 . C scaffold3198 ScafM INDEL 0050.scaffold00177 563599 1 T . scaffold14001 ScafM SNP 0050.scaffold00177 563601 1 G A scaffold14001 ScafM SNP 0050.scaffold00177 563621 1 T C scaffold14001 ScafM SNP 0050.scaffold00177 563630 2 TC CT scaffold14001 ScafM SNP 0050.scaffold00177 563668 1 C T scaffold14001 ScafM SNP 0050.scaffold00177 563703 1 C T scaffold14001 ScafM SNP 0050.scaffold00177 563706 1 C T scaffold14001 ScafM INDEL 0050.scaffold00177 563720 1 T . scaffold14001 ScafM SNP 0050.scaffold00177 563727 1 T C scaffold14001 ScafM SNP 0050.scaffold00177 563733 1 A G scaffold14001 ScafM SNP 0050.scaffold00177 563737 1 C A scaffold14001 ScafM SNP 0050.scaffold00177 563774 1 G T scaffold14001 ScafM SNP 0050.scaffold00177 563784 1 C T scaffold14001 ScafM SNP 0050.scaffold00177 563799 1 A G scaffold14001 ScafM SNP 0050.scaffold00177 563804 2 CG TA scaffold14001 ScafM INDEL 0050.scaffold00177 563812 1 . A scaffold14001 ScafM INDEL 0050.scaffold00177 563843 1 C . scaffold14001 ScafM SNP 0050.scaffold00177 563937 3 TAG CGA scaffold14001 ScafM SNP 0050.scaffold00177 563973 1 C T scaffold14001 ScafM INDEL 0050.scaffold00177 564014 1 . A scaffold14001 ScafM SNP 0050.scaffold00177 564023 1 C A scaffold14001 ScafM SNP 0050.scaffold00177 564031 1 G T scaffold14001 ScafM SNP 0050.scaffold00177 564858 1 A T scaffold10941 ScafM SNP 0050.scaffold00177 564860 1 G A scaffold10941 ScafM SNP 0050.scaffold00177 577865 1 A C scaffold17062 ScafM SNP 0050.scaffold00177 577937 1 C T scaffold17062 ScafM SNP 0050.scaffold00177 577956 1 G T scaffold17062 ScafM SNP 0050.scaffold00177 577978 1 C T scaffold17062 ScafM SNP 0050.scaffold00177 577980 1 C T scaffold17062 ScafM INDEL 0050.scaffold00177 577985 2 GT .C scaffold17062 ScafM SNP 0050.scaffold00177 577999 1 C T scaffold17062 ReadM SNP 0050.scaffold00177 633680 1 A T - ReadM SNP 0050.scaffold00177 633693 1 T C - ReadM SNP 0050.scaffold00177 638780 1 A C - ScafM INDEL 0050.scaffold00177 658881 1 . G scaffold5702 ScafM INDEL 0050.scaffold00177 670990 20 .................... GGGGGGGGGGGGGGGGGGGG scaffold5702 ScafM SNP 0050.scaffold00177 674450 1 G T scaffold5702 ScafM SNP 0050.scaffold00177 722382 2 TA AT scaffold1259 ScafM INDEL 0050.scaffold00177 725902 1 . A scaffold1259 ScafM SNP 0050.scaffold00177 725905 2 GA AT scaffold1259 ScafM INDEL 0050.scaffold00177 741174 1 . C scaffold1259 ScafM SNP 0050.scaffold00177 759181 1 G A scaffold1259 ScafM INDEL 0050.scaffold00177 759183 7 ....... GAAAAAA scaffold1259 ScafM INDEL 0050.scaffold00177 798085 1 . A scaffold3937 ScafM INDEL 0050.scaffold00177 798087 4 .... CAAG scaffold3937 ScafM SNP 0050.scaffold00177 798152 1 A C scaffold3937 ScafM INDEL 0050.scaffold00177 813779 1 . A scaffold3937 ScafM SNP 0050.scaffold00177 813891 1 G T scaffold3937 ReadM INDEL 0050.scaffold00177 827054 2 .. AA - ScafM SNP 0051.scaffold00187 27 1 T A scaffold1733 ScafM SNP 0051.scaffold00187 35 1 A G scaffold1733 ScafM INDEL 0051.scaffold00187 1171 23 ATTATCCTCGTTACTAGACTTGC ....................... scaffold1733 ScafM INDEL 0051.scaffold00187 1308 3 ... CTG scaffold1733 ScafM SNP 0051.scaffold00187 1315 1 T C scaffold1733 ScafM SNP 0051.scaffold00187 1382 1 G T scaffold1733 ScafM SNP 0051.scaffold00187 1494 1 G A scaffold1733 ScafM INDEL 0051.scaffold00187 1499 3 ... CTC scaffold1733 ScafM SNP 0051.scaffold00187 1538 1 A G scaffold1733 ScafM SNP 0051.scaffold00187 1548 1 C T scaffold1733 ScafM SNP 0051.scaffold00187 1550 2 AG CA scaffold1733 ScafM SNP 0051.scaffold00187 1593 1 G C scaffold1733 ScafM SNP 0051.scaffold00187 1649 1 A C scaffold1733 ScafM SNP 0051.scaffold00187 1677 2 AG CA scaffold1733 ScafM SNP 0051.scaffold00187 1756 1 G T scaffold1733 ScafM SNP 0051.scaffold00187 1771 1 G A scaffold1733 ScafM SNP 0051.scaffold00187 1788 1 A G scaffold1733 ScafM SNP 0051.scaffold00187 1790 1 G A scaffold1733 ScafM SNP 0051.scaffold00187 1796 1 G A scaffold1733 ScafM SNP 0051.scaffold00187 1822 1 A T scaffold1733 ScafM SNP 0051.scaffold00187 1875 1 G C scaffold1733 ScafM SNP 0051.scaffold00187 1889 1 T A scaffold1733 ScafM SNP 0051.scaffold00187 2241 1 C T scaffold1635 ReadM SNP 0051.scaffold00187 2366 1 C T - ReadM SNP 0051.scaffold00187 2658 1 A T - ReadM SNP 0051.scaffold00187 2841 1 A G - ReadM SNP 0051.scaffold00187 2884 1 A T - ReadM SNP 0051.scaffold00187 3516 1 T G - ReadM SNP 0051.scaffold00187 3584 1 C T - ReadM SNP 0051.scaffold00187 4556 1 T C - ReadM SNP 0051.scaffold00187 4590 1 G T - ReadM SNP 0051.scaffold00187 5263 1 C A - ReadM SNP 0051.scaffold00187 5324 1 T G - ReadM SNP 0051.scaffold00187 5531 1 A G - ReadM SNP 0051.scaffold00187 5944 1 A G - Both INDEL 0051.scaffold00187 6846 1 . A scaffold1635 ScafM SNP 0051.scaffold00187 6857 1 T A scaffold1635 Both SNP 0051.scaffold00187 7168 1 A G scaffold1635 Both SNP 0051.scaffold00187 7263 1 T C scaffold1635 Both SNP 0051.scaffold00187 7328 1 T C scaffold1635 Both SNP 0051.scaffold00187 7412 1 C T scaffold1635 ReadM INDEL 0051.scaffold00187 7760 1 . T - ReadM SNP 0051.scaffold00187 7908 1 G A - ReadM SNP 0051.scaffold00187 8076 1 A C - ReadM SNP 0051.scaffold00187 8185 1 A G - ReadM SNP 0051.scaffold00187 8215 1 G A - ReadM SNP 0051.scaffold00187 8425 1 T C - ReadM SNP 0051.scaffold00187 8522 1 T C - ReadM SNP 0051.scaffold00187 8675 1 G A - ReadM SNP 0051.scaffold00187 8725 1 C T - ReadM INDEL 0051.scaffold00187 8821 1 . T - ReadM SNP 0051.scaffold00187 9183 1 C T - ReadM SNP 0051.scaffold00187 9420 1 A T - ReadM SNP 0051.scaffold00187 9539 1 T G - Both SNP 0051.scaffold00187 9720 1 T G scaffold1635 ScafM SNP 0051.scaffold00187 9846 1 A G scaffold1635 ReadM SNP 0051.scaffold00187 9909 1 A G - ScafM SNP 0051.scaffold00187 10122 2 GG AA scaffold1635 Both INDEL 0051.scaffold00187 10211 1 T . scaffold1635 Both SNP 0051.scaffold00187 11061 1 T C scaffold1635 ScafM SNP 0051.scaffold00187 12340 1 T C scaffold1635 ReadM SNP 0051.scaffold00187 12483 1 C T - ReadM SNP 0051.scaffold00187 12939 1 C T - ReadM SNP 0051.scaffold00187 13466 1 T C - ReadM SNP 0051.scaffold00187 13496 1 G A - Both SNP 0051.scaffold00187 13783 1 C T scaffold1635 Both SNP 0051.scaffold00187 14004 1 C T scaffold1635 ReadM SNP 0051.scaffold00187 14132 1 T A - ReadM SNP 0051.scaffold00187 14232 1 G A - ReadM SNP 0051.scaffold00187 14323 1 C T - ReadM SNP 0051.scaffold00187 14454 1 G A - ReadM SNP 0051.scaffold00187 14626 1 T G - ReadM SNP 0051.scaffold00187 14750 1 T C - ReadM SNP 0051.scaffold00187 14763 1 C A - ReadM SNP 0051.scaffold00187 14959 1 A C - ReadM SNP 0051.scaffold00187 14984 1 T G - ReadM SNP 0051.scaffold00187 15220 1 T A - ReadM SNP 0051.scaffold00187 15528 1 C T - ReadM SNP 0051.scaffold00187 15550 1 C A - ReadM SNP 0051.scaffold00187 15642 1 G A - ReadM SNP 0051.scaffold00187 15716 1 C T - ReadM SNP 0051.scaffold00187 15935 1 C T - ReadM SNP 0051.scaffold00187 16308 1 C T - ScafM SNP 0051.scaffold00187 16998 1 A C scaffold1635 ReadM SNP 0051.scaffold00187 17495 1 A C - ReadM SNP 0051.scaffold00187 17593 1 T A - ReadM SNP 0051.scaffold00187 17728 1 A G - ReadM SNP 0051.scaffold00187 17821 1 A G - ReadM SNP 0051.scaffold00187 18169 1 T G - ReadM SNP 0051.scaffold00187 18270 1 G T - ReadM SNP 0051.scaffold00187 18354 1 G A - Both SNP 0051.scaffold00187 18531 1 A G scaffold1635 Both SNP 0051.scaffold00187 18544 1 G A scaffold1635 ReadM SNP 0051.scaffold00187 19167 1 C T - ScafM INDEL 0051.scaffold00187 19211 32 AAAAGGCTTATGAAGAAGAGTATATATGCCTC ................................ scaffold1635 ReadM SNP 0051.scaffold00187 19447 1 T A - ReadM SNP 0051.scaffold00187 19494 1 G A - ReadM SNP 0051.scaffold00187 19982 1 G A - ReadM SNP 0051.scaffold00187 20228 1 G C - ScafM INDEL 0051.scaffold00187 21365 1 . T scaffold1635 ScafM INDEL 0051.scaffold00187 21616 2 .. AA scaffold1635 ReadM INDEL 0051.scaffold00187 21625 2 .. AT - ReadM SNP 0051.scaffold00187 21629 1 T A - Both SNP 0051.scaffold00187 21728 1 A G scaffold1635 Both SNP 0051.scaffold00187 21827 1 A G scaffold1635 ReadM SNP 0051.scaffold00187 21858 1 A T - ReadM INDEL 0051.scaffold00187 22024 1 . G - ReadM SNP 0051.scaffold00187 22315 1 G A - ReadM SNP 0051.scaffold00187 22506 1 A G - ReadM SNP 0051.scaffold00187 22633 1 C T - ReadM SNP 0051.scaffold00187 22645 1 C T - ReadM SNP 0051.scaffold00187 22665 1 C T - ReadM SNP 0051.scaffold00187 22707 1 A G - ReadM SNP 0051.scaffold00187 22917 1 G A - ReadM SNP 0051.scaffold00187 23728 1 G A - ReadM SNP 0051.scaffold00187 23777 1 C T - ReadM SNP 0051.scaffold00187 23849 1 A G - ReadM SNP 0051.scaffold00187 23978 1 C T - ReadM SNP 0051.scaffold00187 24185 1 G A - ReadM SNP 0051.scaffold00187 24269 1 A G - ReadM SNP 0051.scaffold00187 24445 1 T A - ReadM SNP 0051.scaffold00187 24754 1 A G - ReadM SNP 0051.scaffold00187 25272 1 G A - ReadM SNP 0051.scaffold00187 25443 1 A G - ReadM SNP 0051.scaffold00187 25752 1 T C - ReadM SNP 0051.scaffold00187 25764 1 G A - Both SNP 0051.scaffold00187 26265 1 C G scaffold1635 Both SNP 0051.scaffold00187 26291 1 G T scaffold1635 Both SNP 0051.scaffold00187 26407 1 C T scaffold1635 ReadM SNP 0051.scaffold00187 26768 1 A G - ReadM SNP 0051.scaffold00187 26795 1 T C - ReadM INDEL 0051.scaffold00187 27055 1 . A - ReadM INDEL 0051.scaffold00187 27096 1 . C - ReadM SNP 0051.scaffold00187 27450 1 G A - ReadM SNP 0051.scaffold00187 27509 1 T C - ReadM SNP 0051.scaffold00187 28019 1 G C - ReadM SNP 0051.scaffold00187 28319 1 A G - ReadM SNP 0051.scaffold00187 28365 1 A G - ReadM SNP 0051.scaffold00187 28694 1 C G - ReadM SNP 0051.scaffold00187 28720 1 T C - ReadM SNP 0051.scaffold00187 29167 1 C T - ReadM INDEL 0051.scaffold00187 29202 1 T . - ReadM SNP 0051.scaffold00187 29232 1 T G - ReadM SNP 0051.scaffold00187 29627 1 A G - ReadM SNP 0051.scaffold00187 30005 1 A G - ReadM INDEL 0051.scaffold00187 30437 1 T . - Both SNP 0051.scaffold00187 30465 1 T C scaffold1635 Both INDEL 0051.scaffold00187 30923 1 . A scaffold1635 Both SNP 0051.scaffold00187 30964 1 A G scaffold1635 Both SNP 0051.scaffold00187 31029 1 T C scaffold1635 ReadM SNP 0051.scaffold00187 31307 1 C A - ReadM SNP 0051.scaffold00187 31321 1 A G - Both SNP 0051.scaffold00187 31439 1 A G scaffold1635 ReadM SNP 0051.scaffold00187 31586 1 G A - ReadM SNP 0051.scaffold00187 31863 1 T C - ReadM SNP 0051.scaffold00187 32564 1 G A - ReadM SNP 0051.scaffold00187 32718 1 G A - ScafM INDEL 0051.scaffold00187 32811 22 ...................... TTGTCAAGGGAACTAGTGAACA scaffold1635 ReadM SNP 0051.scaffold00187 33207 1 G A - ReadM SNP 0051.scaffold00187 33212 1 G A - ReadM SNP 0051.scaffold00187 33563 1 G A - ReadM SNP 0051.scaffold00187 33652 1 G A - ReadM SNP 0051.scaffold00187 34081 1 G T - ReadM SNP 0051.scaffold00187 34228 1 A G - ReadM SNP 0051.scaffold00187 34410 1 C T - ReadM SNP 0051.scaffold00187 34469 1 A G - ReadM SNP 0051.scaffold00187 34806 1 G A - ReadM SNP 0051.scaffold00187 35110 1 G C - ReadM SNP 0051.scaffold00187 35141 1 G A - ReadM SNP 0051.scaffold00187 35190 1 G A - ReadM INDEL 0051.scaffold00187 35400 1 A . - ReadM SNP 0051.scaffold00187 37279 1 G A - ReadM SNP 0051.scaffold00187 37433 1 C T - Both SNP 0051.scaffold00187 37716 1 C A scaffold19844 Both SNP 0051.scaffold00187 37942 1 C A scaffold19844 Both SNP 0051.scaffold00187 38417 1 C T scaffold19844 ReadM SNP 0051.scaffold00187 38611 1 A C - Both SNP 0051.scaffold00187 38826 1 T C scaffold19844 Both SNP 0051.scaffold00187 39224 1 A C scaffold19844 ReadM SNP 0051.scaffold00187 39903 1 G A - ReadM SNP 0051.scaffold00187 40243 1 A C - ReadM SNP 0051.scaffold00187 40585 1 G T - ReadM SNP 0051.scaffold00187 41643 1 C T - ReadM SNP 0051.scaffold00187 41731 1 G A - ReadM SNP 0051.scaffold00187 46154 1 G A - Both SNP 0051.scaffold00187 46282 1 G T scaffold18281 ReadM INDEL 0051.scaffold00187 46560 1 G . - Both SNP 0051.scaffold00187 46699 1 C T scaffold18281 Both SNP 0051.scaffold00187 46776 1 A C scaffold18281 Both SNP 0051.scaffold00187 47085 1 G A scaffold18281 Both SNP 0051.scaffold00187 47098 1 C T scaffold18281 Both SNP 0051.scaffold00187 47292 1 C A scaffold18281 Both SNP 0051.scaffold00187 47307 1 C T scaffold18281 ScafM SNP 0051.scaffold00187 50263 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 50353 1 G T scaffold9375 ScafM SNP 0051.scaffold00187 50360 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 50395 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 50405 1 C T scaffold9375 ScafM SNP 0051.scaffold00187 50490 1 C A scaffold9375 ScafM SNP 0051.scaffold00187 50513 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 50585 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 50587 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 50632 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 50652 1 T A scaffold9375 ScafM SNP 0051.scaffold00187 50708 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 50732 1 A T scaffold9375 ScafM SNP 0051.scaffold00187 50822 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 50856 1 T A scaffold9375 ScafM SNP 0051.scaffold00187 50959 1 A C scaffold9375 ScafM SNP 0051.scaffold00187 51002 1 G T scaffold9375 ScafM SNP 0051.scaffold00187 51009 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 51114 1 A T scaffold9375 ScafM SNP 0051.scaffold00187 51137 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 51141 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 51154 2 TC GT scaffold9375 ScafM INDEL 0051.scaffold00187 51195 2 TC .. scaffold9375 ScafM SNP 0051.scaffold00187 51368 1 A G scaffold9375 ScafM INDEL 0051.scaffold00187 51401 1 . T scaffold9375 ScafM INDEL 0051.scaffold00187 51403 2 .. TT scaffold9375 ScafM SNP 0051.scaffold00187 51441 1 A G scaffold9375 ScafM SNP 0051.scaffold00187 51558 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 51584 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 51598 1 G A scaffold9375 ScafM INDEL 0051.scaffold00187 51635 2 GG .. scaffold9375 ScafM SNP 0051.scaffold00187 51638 1 A T scaffold9375 ScafM SNP 0051.scaffold00187 51646 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 51703 1 A C scaffold9375 ScafM SNP 0051.scaffold00187 51748 1 A T scaffold9375 ScafM SNP 0051.scaffold00187 51799 1 C T scaffold9375 ScafM SNP 0051.scaffold00187 51820 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 51823 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 51862 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 51892 1 C T scaffold9375 ScafM SNP 0051.scaffold00187 52203 1 T G scaffold9375 ScafM SNP 0051.scaffold00187 52229 1 G T scaffold9375 ScafM SNP 0051.scaffold00187 52240 1 A T scaffold9375 ScafM SNP 0051.scaffold00187 52311 1 T C scaffold9375 ScafM SNP 0051.scaffold00187 52351 1 A C scaffold9375 ScafM SNP 0051.scaffold00187 52383 1 C T scaffold9375 ScafM INDEL 0051.scaffold00187 52479 1 . A scaffold9375 ScafM SNP 0051.scaffold00187 52509 1 A G scaffold9375 ScafM SNP 0051.scaffold00187 52550 1 C A scaffold9375 ScafM SNP 0051.scaffold00187 52567 1 C A scaffold9375 ScafM SNP 0051.scaffold00187 52599 1 T A scaffold9375 ScafM SNP 0051.scaffold00187 52715 1 G A scaffold9375 ScafM SNP 0051.scaffold00187 52745 2 TG CA scaffold9375 ScafM SNP 0051.scaffold00187 52777 1 C A scaffold9375 ScafM INDEL 0051.scaffold00187 57278 1 T . scaffold17250 ScafM SNP 0051.scaffold00187 57282 1 G C scaffold17250 ScafM SNP 0051.scaffold00187 57304 1 A C scaffold17250 ScafM SNP 0051.scaffold00187 57322 2 GC AT scaffold17250 ScafM SNP 0051.scaffold00187 57327 1 G T scaffold17250 ScafM SNP 0051.scaffold00187 57337 1 C A scaffold17250 ScafM SNP 0051.scaffold00187 57347 1 G C scaffold17250 ScafM SNP 0051.scaffold00187 57349 1 G A scaffold17250 ScafM SNP 0051.scaffold00187 57351 1 G C scaffold17250 ScafM SNP 0051.scaffold00187 57368 1 A C scaffold17250 ScafM SNP 0051.scaffold00187 57384 1 T C scaffold17250 ScafM SNP 0051.scaffold00187 57396 1 G A scaffold17250 ScafM SNP 0051.scaffold00187 57454 1 C T scaffold17250 ScafM SNP 0051.scaffold00187 57456 1 G A scaffold17250 ScafM SNP 0051.scaffold00187 57498 1 C T scaffold17250 ScafM SNP 0051.scaffold00187 57505 1 T C scaffold17250 ScafM SNP 0051.scaffold00187 57512 1 G A scaffold17250 ScafM SNP 0051.scaffold00187 57526 1 G A scaffold17250 ScafM INDEL 0051.scaffold00187 57531 1 . C scaffold17250 ScafM SNP 0051.scaffold00187 57536 1 T C scaffold17250 ScafM SNP 0051.scaffold00187 57542 1 C A scaffold17250 ScafM SNP 0051.scaffold00187 57547 1 T C scaffold17250 ScafM INDEL 0051.scaffold00187 57554 1 T . scaffold17250 ScafM SNP 0051.scaffold00187 57589 1 A G scaffold17250 ScafM SNP 0051.scaffold00187 57594 1 G A scaffold17250 ScafM INDEL 0051.scaffold00187 57632 10 .......... AACAAAAGCA scaffold17250 ScafM SNP 0051.scaffold00187 57633 1 T A scaffold17250 ScafM INDEL 0051.scaffold00187 57640 1 . G scaffold17250 ScafM SNP 0051.scaffold00187 57642 1 C T scaffold17250 ScafM SNP 0051.scaffold00187 57645 1 G A scaffold17250 ScafM SNP 0051.scaffold00187 57652 1 C T scaffold17250 ScafM SNP 0051.scaffold00187 57682 1 A T scaffold17250 ScafM SNP 0051.scaffold00187 57686 1 C G scaffold17250 ScafM INDEL 0051.scaffold00187 57689 1 T . scaffold17250 ScafM INDEL 0051.scaffold00187 57699 2 .. AT scaffold17250 ReadM SNP 0051.scaffold00187 58554 1 A T - Both INDEL 0051.scaffold00187 58611 1 . G scaffold18281 Both SNP 0051.scaffold00187 58665 1 A G scaffold18281 ReadM SNP 0051.scaffold00187 58760 1 C T - ReadM INDEL 0051.scaffold00187 58868 2 TC .. - ScafM INDEL 0051.scaffold00187 59210 2 TT .. scaffold18281 Both SNP 0051.scaffold00187 59491 1 T C scaffold18281 Both SNP 0051.scaffold00187 59549 1 A C scaffold18281 Both INDEL 0051.scaffold00187 60498 1 . A scaffold18281 Both SNP 0051.scaffold00187 60789 1 A T scaffold18281 Both SNP 0051.scaffold00187 61651 1 T C scaffold18281 ScafM INDEL 0051.scaffold00187 61666 2 .. TC scaffold18281 Both SNP 0051.scaffold00187 62736 1 T C scaffold18281 Both SNP 0051.scaffold00187 62750 1 G A scaffold18281 Both SNP 0051.scaffold00187 62840 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 63646 2 .. TT scaffold18281 Both INDEL 0051.scaffold00187 64300 1 . T scaffold18281 Both SNP 0051.scaffold00187 64408 1 A C scaffold18281 Both SNP 0051.scaffold00187 66038 1 C T scaffold18281 Both SNP 0051.scaffold00187 66314 1 G A scaffold18281 ScafM INDEL 0051.scaffold00187 67032 1 . A scaffold18281 Both SNP 0051.scaffold00187 67369 1 C T scaffold18281 Both SNP 0051.scaffold00187 67574 1 C T scaffold18281 Both INDEL 0051.scaffold00187 67987 3 ... AGG scaffold18281 Both SNP 0051.scaffold00187 68024 1 A T scaffold18281 Both SNP 0051.scaffold00187 68603 1 T C scaffold18281 ScafM INDEL 0051.scaffold00187 68939 13 TTCAAATTGAATC ............. scaffold18281 ScafM INDEL 0051.scaffold00187 69602 1 . T scaffold18281 Both SNP 0051.scaffold00187 69672 1 G T scaffold18281 ScafM SNP 0051.scaffold00187 69863 2 GA AT scaffold18281 Both SNP 0051.scaffold00187 69887 1 T A scaffold18281 ReadM SNP 0051.scaffold00187 70378 1 T A - ScafM SNP 0051.scaffold00187 70519 1 A T scaffold18281 ScafM SNP 0051.scaffold00187 70624 1 T A scaffold18281 ScafM SNP 0051.scaffold00187 70644 2 CC TT scaffold18281 ScafM SNP 0051.scaffold00187 70675 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 70681 1 G C scaffold18281 ScafM SNP 0051.scaffold00187 70730 1 G A scaffold18281 ScafM SNP 0051.scaffold00187 70745 1 A G scaffold18281 ScafM SNP 0051.scaffold00187 70758 1 A G scaffold18281 ScafM SNP 0051.scaffold00187 70778 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 70799 1 G T scaffold18281 ScafM SNP 0051.scaffold00187 70803 2 GA TG scaffold18281 ScafM SNP 0051.scaffold00187 70823 2 TG AT scaffold18281 ScafM SNP 0051.scaffold00187 71089 1 A C scaffold18281 ScafM SNP 0051.scaffold00187 71091 1 G A scaffold18281 ScafM SNP 0051.scaffold00187 71101 1 A T scaffold18281 ScafM SNP 0051.scaffold00187 71270 1 G A scaffold18281 ScafM INDEL 0051.scaffold00187 71283 67 ................................................................... ATTAACATCATATCATATTACCAGAAATTAGCTGAAGCTTTGAAACAGTGATTATTAAGCTCGCACT scaffold18281 Both SNP 0051.scaffold00187 71586 1 G T scaffold18281 Both SNP 0051.scaffold00187 71607 1 A G scaffold18281 Both SNP 0051.scaffold00187 71737 1 A G scaffold18281 Both SNP 0051.scaffold00187 72326 1 C A scaffold18281 Both SNP 0051.scaffold00187 72357 1 A T scaffold18281 Both SNP 0051.scaffold00187 72373 1 T C scaffold18281 ScafM INDEL 0051.scaffold00187 72481 1 . A scaffold18281 Both SNP 0051.scaffold00187 72646 1 A T scaffold18281 Both SNP 0051.scaffold00187 72689 1 A T scaffold18281 ReadM SNP 0051.scaffold00187 72761 1 T C - ScafM INDEL 0051.scaffold00187 72814 3 ... GAA scaffold18281 Both SNP 0051.scaffold00187 72841 1 G A scaffold18281 Both SNP 0051.scaffold00187 72848 2 TT CA scaffold18281 Both SNP 0051.scaffold00187 73113 1 A C scaffold18281 Both INDEL 0051.scaffold00187 73451 1 G . scaffold18281 Both SNP 0051.scaffold00187 73643 1 C T scaffold18281 ScafM SNP 0051.scaffold00187 74472 1 G A scaffold18281 ScafM SNP 0051.scaffold00187 74592 1 A G scaffold18281 Both SNP 0051.scaffold00187 74656 1 A G scaffold18281 Both INDEL 0051.scaffold00187 74751 1 . T scaffold18281 Both SNP 0051.scaffold00187 74845 1 G C scaffold18281 ReadM SNP 0051.scaffold00187 74909 1 T C - ReadM SNP 0051.scaffold00187 74919 1 C A - ReadM SNP 0051.scaffold00187 74949 1 T C - ReadM SNP 0051.scaffold00187 75048 1 C T - ReadM INDEL 0051.scaffold00187 75263 1 T . - ReadM SNP 0051.scaffold00187 75307 1 T A - ReadM SNP 0051.scaffold00187 75396 1 G A - ReadM SNP 0051.scaffold00187 75458 1 T G - Both SNP 0051.scaffold00187 75627 1 G A scaffold18281 Both INDEL 0051.scaffold00187 75655 1 . A scaffold18281 Both SNP 0051.scaffold00187 75818 1 A G scaffold18281 Both INDEL 0051.scaffold00187 75851 1 T . scaffold18281 ReadM SNP 0051.scaffold00187 76491 1 T A - ReadM SNP 0051.scaffold00187 76878 1 C T - Both SNP 0051.scaffold00187 76932 1 G A scaffold18281 ReadM SNP 0051.scaffold00187 77009 1 T C - ReadM SNP 0051.scaffold00187 77136 1 C A - ReadM SNP 0051.scaffold00187 77148 1 C T - ReadM SNP 0051.scaffold00187 77203 1 T G - ReadM SNP 0051.scaffold00187 77378 1 C T - ReadM SNP 0051.scaffold00187 77414 1 A C - ReadM SNP 0051.scaffold00187 77441 1 C T - ReadM SNP 0051.scaffold00187 77609 1 G A - ReadM SNP 0051.scaffold00187 77895 1 T C - ReadM INDEL 0051.scaffold00187 77914 1 . T - ReadM SNP 0051.scaffold00187 78008 1 A G - ReadM SNP 0051.scaffold00187 78302 1 C T - ReadM SNP 0051.scaffold00187 78659 1 A C - ReadM INDEL 0051.scaffold00187 78893 2 AA .. - ReadM SNP 0051.scaffold00187 78931 1 A G - ReadM SNP 0051.scaffold00187 78998 1 A C - ReadM SNP 0051.scaffold00187 79047 1 C T - ReadM SNP 0051.scaffold00187 79091 1 C T - ReadM INDEL 0051.scaffold00187 79115 1 A . - ReadM SNP 0051.scaffold00187 79272 1 A T - ReadM SNP 0051.scaffold00187 79279 1 A C - ReadM SNP 0051.scaffold00187 79348 1 T C - ReadM SNP 0051.scaffold00187 79487 1 A G - ScafM SNP 0051.scaffold00187 79717 1 A G scaffold18281 ReadM SNP 0051.scaffold00187 79936 1 C T - ReadM SNP 0051.scaffold00187 80049 1 C T - ReadM SNP 0051.scaffold00187 80316 1 C T - ReadM SNP 0051.scaffold00187 80371 1 T C - Both SNP 0051.scaffold00187 80752 1 A G scaffold18281 Both SNP 0051.scaffold00187 81162 1 C T scaffold18281 ReadM SNP 0051.scaffold00187 81817 1 G A - ReadM SNP 0051.scaffold00187 81928 1 A C - ReadM SNP 0051.scaffold00187 81986 1 A G - ReadM SNP 0051.scaffold00187 82181 1 G A - Both SNP 0051.scaffold00187 82372 1 A G scaffold18281 Both SNP 0051.scaffold00187 82476 1 A G scaffold18281 ReadM SNP 0051.scaffold00187 82805 1 A G - ReadM SNP 0051.scaffold00187 82902 1 C T - ReadM SNP 0051.scaffold00187 82969 1 C T - ReadM SNP 0051.scaffold00187 82986 1 G T - ReadM SNP 0051.scaffold00187 83015 1 T C - ReadM SNP 0051.scaffold00187 83088 1 G A - ReadM SNP 0051.scaffold00187 83417 1 A C - ReadM SNP 0051.scaffold00187 83439 1 T A - ReadM SNP 0051.scaffold00187 83657 1 A G - ReadM SNP 0051.scaffold00187 83725 1 A G - ReadM SNP 0051.scaffold00187 83922 1 C A - ReadM SNP 0051.scaffold00187 84122 1 A G - ReadM SNP 0051.scaffold00187 84149 1 A G - ReadM SNP 0051.scaffold00187 84259 1 T G - ReadM SNP 0051.scaffold00187 84334 1 T C - ReadM SNP 0051.scaffold00187 84532 1 G A - Both INDEL 0051.scaffold00187 84916 1 . G scaffold18281 Both SNP 0051.scaffold00187 84942 1 A G scaffold18281 Both SNP 0051.scaffold00187 84994 1 G T scaffold18281 Both SNP 0051.scaffold00187 85027 1 G T scaffold18281 Both SNP 0051.scaffold00187 85033 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 85068 1 . T scaffold18281 ScafM INDEL 0051.scaffold00187 85107 1 C . scaffold18281 ScafM INDEL 0051.scaffold00187 85109 1 A . scaffold18281 ReadM SNP 0051.scaffold00187 85266 1 G A - Both SNP 0051.scaffold00187 85531 1 G T scaffold18281 Both SNP 0051.scaffold00187 85540 1 A G scaffold18281 Both SNP 0051.scaffold00187 85595 1 G A scaffold18281 ReadM SNP 0051.scaffold00187 85768 1 A C - ReadM SNP 0051.scaffold00187 85853 1 C T - ReadM SNP 0051.scaffold00187 85975 1 T A - ReadM SNP 0051.scaffold00187 86043 1 A G - ReadM SNP 0051.scaffold00187 86207 1 T C - ReadM SNP 0051.scaffold00187 86320 1 G A - ReadM INDEL 0051.scaffold00187 86349 1 G . - ReadM SNP 0051.scaffold00187 86775 1 A G - ReadM SNP 0051.scaffold00187 86854 1 G A - ReadM SNP 0051.scaffold00187 87082 1 G C - ReadM SNP 0051.scaffold00187 87369 1 G A - ReadM SNP 0051.scaffold00187 87372 1 T A - ReadM SNP 0051.scaffold00187 87750 1 G C - ReadM SNP 0051.scaffold00187 87784 1 A C - ReadM SNP 0051.scaffold00187 87798 1 T C - ReadM SNP 0051.scaffold00187 87839 1 G T - ReadM SNP 0051.scaffold00187 88003 1 G A - ReadM SNP 0051.scaffold00187 88038 1 T A - ReadM SNP 0051.scaffold00187 88159 1 G A - ReadM SNP 0051.scaffold00187 88427 1 C T - ReadM SNP 0051.scaffold00187 88678 1 G A - ReadM SNP 0051.scaffold00187 88831 1 A T - ReadM SNP 0051.scaffold00187 88927 1 A G - ReadM SNP 0051.scaffold00187 89142 1 T C - Both SNP 0051.scaffold00187 89150 1 G A scaffold18281 Both SNP 0051.scaffold00187 89269 1 A G scaffold18281 Both SNP 0051.scaffold00187 89303 1 A G scaffold18281 Both SNP 0051.scaffold00187 89339 1 C T scaffold18281 Both INDEL 0051.scaffold00187 89451 1 T . scaffold18281 ScafM INDEL 0051.scaffold00187 89585 39 TAACAATTAATAAACAACCATTAACCAATCATGTAACCG ....................................... scaffold18281 ScafM SNP 0051.scaffold00187 89763 1 C T scaffold18281 Both SNP 0051.scaffold00187 89811 1 C A scaffold18281 Both SNP 0051.scaffold00187 89863 1 C T scaffold18281 Both SNP 0051.scaffold00187 89932 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 90070 13 ............. ATAAAATGGAGAA scaffold18281 ScafM SNP 0051.scaffold00187 90115 1 A T scaffold18281 ScafM SNP 0051.scaffold00187 90134 1 A C scaffold18281 ScafM INDEL 0051.scaffold00187 90139 5 ..... TTTTT scaffold18281 Both SNP 0051.scaffold00187 90213 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 90460 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 90471 1 G . scaffold18281 ScafM SNP 0051.scaffold00187 90474 1 C A scaffold18281 ScafM SNP 0051.scaffold00187 90487 1 A C scaffold18281 Both INDEL 0051.scaffold00187 90570 1 A . scaffold18281 Both SNP 0051.scaffold00187 90586 1 A G scaffold18281 Both SNP 0051.scaffold00187 90919 1 A G scaffold18281 Both SNP 0051.scaffold00187 90942 1 A C scaffold18281 Both SNP 0051.scaffold00187 91124 1 G C scaffold18281 Both SNP 0051.scaffold00187 91166 1 T C scaffold18281 Both SNP 0051.scaffold00187 91326 1 G T scaffold18281 Both SNP 0051.scaffold00187 91343 1 A G scaffold18281 Both SNP 0051.scaffold00187 91500 1 G A scaffold18281 Both SNP 0051.scaffold00187 91708 1 G A scaffold18281 Both INDEL 0051.scaffold00187 91722 2 AA .. scaffold18281 ScafM SNP 0051.scaffold00187 92010 1 C A scaffold18281 ScafM SNP 0051.scaffold00187 92176 1 C T scaffold18281 Both SNP 0051.scaffold00187 93366 1 T G scaffold18281 Both SNP 0051.scaffold00187 93635 1 C T scaffold18281 Both SNP 0051.scaffold00187 93882 1 A G scaffold18281 Both SNP 0051.scaffold00187 93934 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 93969 3 TCT ... scaffold18281 Both INDEL 0051.scaffold00187 94170 2 TC .. scaffold18281 Both SNP 0051.scaffold00187 94197 1 C T scaffold18281 ReadM SNP 0051.scaffold00187 94270 1 A T - Both SNP 0051.scaffold00187 94388 1 T G scaffold18281 Both SNP 0051.scaffold00187 94404 1 A G scaffold18281 ScafM SNP 0051.scaffold00187 94506 1 C A scaffold18281 ScafM INDEL 0051.scaffold00187 94530 3 ... TCA scaffold18281 ScafM INDEL 0051.scaffold00187 94571 1 . G scaffold18281 ScafM SNP 0051.scaffold00187 94577 1 A G scaffold18281 ScafM SNP 0051.scaffold00187 94595 1 T C scaffold18281 ScafM INDEL 0051.scaffold00187 94616 41 TGTGAAGCTCGGACTCGGCCAGCCACCCTGCTGTATCGGTT ......................................... scaffold18281 ScafM SNP 0051.scaffold00187 94681 1 G C scaffold18281 Both SNP 0051.scaffold00187 94694 1 A G scaffold18281 Both SNP 0051.scaffold00187 94887 1 T G scaffold18281 ScafM SNP 0051.scaffold00187 94930 1 A G scaffold18281 ScafM INDEL 0051.scaffold00187 94941 1 C . scaffold18281 ScafM INDEL 0051.scaffold00187 94945 1 G . scaffold18281 ScafM INDEL 0051.scaffold00187 95068 3 ... AAC scaffold18281 ScafM SNP 0051.scaffold00187 95074 1 G A scaffold18281 ScafM INDEL 0051.scaffold00187 95103 1 . T scaffold18281 ScafM INDEL 0051.scaffold00187 95197 1 T . scaffold18281 ScafM SNP 0051.scaffold00187 95274 1 C T scaffold18281 ScafM INDEL 0051.scaffold00187 95279 1 C . scaffold18281 ScafM INDEL 0051.scaffold00187 95350 1 T . scaffold18281 Both SNP 0051.scaffold00187 95642 1 G C scaffold18281 Both SNP 0051.scaffold00187 95707 1 G A scaffold18281 Both SNP 0051.scaffold00187 95714 1 C A scaffold18281 Both SNP 0051.scaffold00187 95984 1 A G scaffold18281 Both SNP 0051.scaffold00187 96019 1 G A scaffold18281 Both SNP 0051.scaffold00187 97295 1 T C scaffold18281 Both SNP 0051.scaffold00187 97405 1 T G scaffold18281 Both SNP 0051.scaffold00187 97543 1 C A scaffold18281 Both SNP 0051.scaffold00187 97733 1 A T scaffold18281 Both SNP 0051.scaffold00187 97774 1 G A scaffold18281 Both SNP 0051.scaffold00187 97778 1 A T scaffold18281 ReadM INDEL 0051.scaffold00187 97942 1 . A - ReadM SNP 0051.scaffold00187 97951 1 G A - Both SNP 0051.scaffold00187 98237 1 C T scaffold18281 Both SNP 0051.scaffold00187 98309 1 T G scaffold18281 Both SNP 0051.scaffold00187 98317 1 C T scaffold18281 Both SNP 0051.scaffold00187 98502 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 98703 1 A G scaffold18281 ScafM INDEL 0051.scaffold00187 98709 3 ... TAG scaffold18281 ScafM SNP 0051.scaffold00187 98740 1 T A scaffold18281 ScafM INDEL 0051.scaffold00187 98760 11 ........... TGAATTGTTAG scaffold18281 ReadM INDEL 0051.scaffold00187 98824 2 .. TT - Both INDEL 0051.scaffold00187 98834 2 .. TA scaffold18281 ScafM SNP 0051.scaffold00187 99103 1 G A scaffold18281 ScafM SNP 0051.scaffold00187 99108 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 99112 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 99117 1 T C scaffold18281 ScafM SNP 0051.scaffold00187 99121 2 GG CA scaffold18281 ScafM SNP 0051.scaffold00187 99146 1 G A scaffold18281 ScafM SNP 0051.scaffold00187 99155 1 T A scaffold18281 ScafM INDEL 0051.scaffold00187 99157 1 T . scaffold18281 Both SNP 0051.scaffold00187 99297 1 A C scaffold18281 Both SNP 0051.scaffold00187 99315 1 G T scaffold18281 ReadM SNP 0051.scaffold00187 99468 1 A T - ScafM SNP 0051.scaffold00187 99518 1 C A scaffold18281 ScafM SNP 0051.scaffold00187 99522 1 A T scaffold18281 ScafM SNP 0051.scaffold00187 99552 1 G T scaffold18281 ScafM SNP 0051.scaffold00187 99562 1 A C scaffold18281 Both INDEL 0051.scaffold00187 99579 1 . A scaffold18281 Both SNP 0051.scaffold00187 99633 1 A G scaffold18281 ScafM INDEL 0051.scaffold00187 99746 3 GTT ... scaffold18281 ScafM SNP 0051.scaffold00187 99751 1 C T scaffold18281 ScafM SNP 0051.scaffold00187 99756 1 C T scaffold18281 ScafM SNP 0051.scaffold00187 99759 1 G C scaffold18281 ScafM INDEL 0051.scaffold00187 99833 1 . A scaffold18281 ScafM INDEL 0051.scaffold00187 99855 1 . A scaffold18281 ScafM SNP 0051.scaffold00187 99858 1 A C scaffold18281 ScafM SNP 0051.scaffold00187 99864 1 T G scaffold18281 ScafM INDEL 0051.scaffold00187 99916 14 .............. GATGATGATGATGA scaffold18281 ScafM INDEL 0051.scaffold00187 99927 4 .... ATAT scaffold18281 ScafM SNP 0051.scaffold00187 99968 1 C G scaffold18281 ScafM SNP 0051.scaffold00187 100747 1 C A scaffold3063 ScafM SNP 0051.scaffold00187 100780 1 T A scaffold3063 ScafM INDEL 0051.scaffold00187 101014 2 .. AA scaffold3063 ScafM INDEL 0051.scaffold00187 101067 1 . G scaffold3063 Both SNP 0051.scaffold00187 101230 1 G T scaffold3063 Both SNP 0051.scaffold00187 101337 1 C T scaffold3063 Both INDEL 0051.scaffold00187 101425 1 T . scaffold3063 Both SNP 0051.scaffold00187 101457 1 C A scaffold3063 Both SNP 0051.scaffold00187 101464 1 C T scaffold3063 Both SNP 0051.scaffold00187 101494 1 T C scaffold3063 Both SNP 0051.scaffold00187 101567 1 G T scaffold3063 Both SNP 0051.scaffold00187 101687 1 T C scaffold3063 ReadM SNP 0051.scaffold00187 101946 1 T G - ReadM SNP 0051.scaffold00187 101952 1 T C - ReadM INDEL 0051.scaffold00187 102016 2 .. TT - ReadM INDEL 0051.scaffold00187 102113 1 T . - ReadM SNP 0051.scaffold00187 102128 1 T C - ReadM SNP 0051.scaffold00187 102239 1 G A - ReadM SNP 0051.scaffold00187 102307 1 G T - Both SNP 0051.scaffold00187 102410 1 T G scaffold3063 ReadM SNP 0051.scaffold00187 102586 1 T A - ReadM SNP 0051.scaffold00187 102638 1 A T - ReadM SNP 0051.scaffold00187 102717 1 T C - ReadM SNP 0051.scaffold00187 102776 1 C T - ReadM SNP 0051.scaffold00187 102807 1 T A - ReadM SNP 0051.scaffold00187 102869 1 T C - ReadM SNP 0051.scaffold00187 102928 1 G A - ReadM SNP 0051.scaffold00187 103017 1 G A - ReadM SNP 0051.scaffold00187 103252 1 G T - ReadM SNP 0051.scaffold00187 103453 1 T G - ReadM SNP 0051.scaffold00187 103474 1 G A - ReadM SNP 0051.scaffold00187 103880 1 G A - ReadM SNP 0051.scaffold00187 103907 1 A G - ReadM SNP 0051.scaffold00187 103964 1 G A - ReadM SNP 0051.scaffold00187 104098 1 A G - ReadM SNP 0051.scaffold00187 104376 1 A G - ReadM SNP 0051.scaffold00187 104476 1 T C - ReadM SNP 0051.scaffold00187 104493 1 T C - ReadM INDEL 0051.scaffold00187 104638 3 CTT ... - ReadM SNP 0051.scaffold00187 104690 1 A G - ReadM SNP 0051.scaffold00187 104722 1 C T - ReadM SNP 0051.scaffold00187 104735 1 T C - ReadM SNP 0051.scaffold00187 104864 1 A G - ReadM SNP 0051.scaffold00187 104992 1 A G - Both SNP 0051.scaffold00187 105097 1 G A scaffold3063 ReadM INDEL 0051.scaffold00187 105128 1 T . - Both INDEL 0051.scaffold00187 105174 1 A . scaffold3063 Both SNP 0051.scaffold00187 105245 1 A G scaffold3063 ScafM INDEL 0051.scaffold00187 105277 1 C . scaffold3063 ScafM INDEL 0051.scaffold00187 105281 1 . T scaffold3063 ScafM SNP 0051.scaffold00187 105285 1 C T scaffold3063 ScafM SNP 0051.scaffold00187 105340 2 GC TG scaffold3063 Both SNP 0051.scaffold00187 105385 1 G A scaffold3063 Both SNP 0051.scaffold00187 105391 1 A G scaffold3063 ReadM SNP 0051.scaffold00187 105564 1 A G - ReadM SNP 0051.scaffold00187 105576 1 G C - ReadM SNP 0051.scaffold00187 105885 1 A C - Both SNP 0051.scaffold00187 106048 1 T G scaffold3063 ScafM INDEL 0051.scaffold00187 106109 2 .. AC scaffold3063 ScafM SNP 0051.scaffold00187 106114 2 CC TA scaffold3063 Both SNP 0051.scaffold00187 106195 1 C T scaffold3063 ReadM INDEL 0051.scaffold00187 106366 1 G . - Both SNP 0051.scaffold00187 106427 1 T C scaffold3063 Both SNP 0051.scaffold00187 106437 1 A G scaffold3063 Both SNP 0051.scaffold00187 106442 1 T A scaffold3063 ReadM SNP 0051.scaffold00187 106495 1 T G - ReadM SNP 0051.scaffold00187 106566 1 C T - ReadM SNP 0051.scaffold00187 106603 1 A G - ReadM SNP 0051.scaffold00187 106653 1 C T - ReadM SNP 0051.scaffold00187 106768 1 A G - ReadM SNP 0051.scaffold00187 106802 1 C T - ReadM SNP 0051.scaffold00187 106876 1 C T - ReadM SNP 0051.scaffold00187 107037 1 C T - ReadM SNP 0051.scaffold00187 107072 1 C T - ReadM SNP 0051.scaffold00187 107311 1 C T - ReadM SNP 0051.scaffold00187 107439 1 A G - ReadM SNP 0051.scaffold00187 107442 1 G T - ReadM SNP 0051.scaffold00187 107531 1 A G - ReadM SNP 0051.scaffold00187 107555 1 G A - ReadM SNP 0051.scaffold00187 107564 1 A G - ReadM SNP 0051.scaffold00187 107673 1 A G - ReadM INDEL 0051.scaffold00187 107764 1 . T - ReadM SNP 0051.scaffold00187 107785 1 C T - ReadM SNP 0051.scaffold00187 108023 1 A T - ReadM SNP 0051.scaffold00187 108080 1 T C - ReadM SNP 0051.scaffold00187 108401 1 G A - ReadM SNP 0051.scaffold00187 108466 1 C T - ReadM SNP 0051.scaffold00187 108615 1 A T - ReadM SNP 0051.scaffold00187 108685 1 G A - ReadM SNP 0051.scaffold00187 108726 1 G A - ReadM SNP 0051.scaffold00187 108752 1 C T - ReadM SNP 0051.scaffold00187 108853 1 G A - ReadM SNP 0051.scaffold00187 108875 1 A T - ReadM SNP 0051.scaffold00187 109013 1 T C - ReadM SNP 0051.scaffold00187 109098 1 T C - ReadM SNP 0051.scaffold00187 109211 1 C T - ReadM SNP 0051.scaffold00187 109325 1 A G - ReadM SNP 0051.scaffold00187 109335 1 G A - ReadM SNP 0051.scaffold00187 109343 1 G A - ReadM SNP 0051.scaffold00187 110479 1 T C - ReadM SNP 0051.scaffold00187 110507 1 A C - ReadM SNP 0051.scaffold00187 110594 1 T C - ReadM SNP 0051.scaffold00187 110693 1 C T - Both SNP 0051.scaffold00187 110789 1 T G scaffold3063 Both SNP 0051.scaffold00187 110803 1 G T scaffold3063 ScafM SNP 0051.scaffold00187 110889 1 A T scaffold3063 Both SNP 0051.scaffold00187 111018 1 A G scaffold3063 Both SNP 0051.scaffold00187 111040 1 C T scaffold3063 Both INDEL 0051.scaffold00187 111193 1 T . scaffold3063 Both INDEL 0051.scaffold00187 111467 1 . T scaffold3063 ScafM SNP 0051.scaffold00187 111629 1 T C scaffold3063 ScafM SNP 0051.scaffold00187 111661 1 C A scaffold3063 Both SNP 0051.scaffold00187 111687 1 A C scaffold3063 ScafM SNP 0051.scaffold00187 111780 2 AC CA scaffold3063 ReadM SNP 0051.scaffold00187 112711 1 A C - ReadM SNP 0051.scaffold00187 112719 1 G T - ReadM SNP 0051.scaffold00187 112880 1 G A - ReadM INDEL 0051.scaffold00187 112941 1 . A - ReadM INDEL 0051.scaffold00187 113078 1 . G - ReadM SNP 0051.scaffold00187 113131 1 T A - ReadM SNP 0051.scaffold00187 113135 1 T A - ReadM SNP 0051.scaffold00187 113665 1 T C - ReadM SNP 0051.scaffold00187 113688 1 C T - ReadM SNP 0051.scaffold00187 113732 1 A G - ReadM SNP 0051.scaffold00187 113771 1 A C - ReadM SNP 0051.scaffold00187 113834 1 T C - ReadM INDEL 0051.scaffold00187 113922 1 A . - ReadM SNP 0051.scaffold00187 114014 1 G A - ReadM SNP 0051.scaffold00187 116322 1 T C - ReadM SNP 0051.scaffold00187 116324 1 T G - ReadM SNP 0051.scaffold00187 116395 1 A G - ReadM SNP 0051.scaffold00187 116435 1 G T - ReadM SNP 0051.scaffold00187 116443 1 T A - ReadM SNP 0051.scaffold00187 116588 1 G A - ScafM SNP 0051.scaffold00187 116622 1 G A scaffold7698 ScafM SNP 0051.scaffold00187 116628 1 G C scaffold7698 ScafM SNP 0051.scaffold00187 116666 2 TG GT scaffold7698 ScafM SNP 0051.scaffold00187 116669 1 A C scaffold7698 ScafM SNP 0051.scaffold00187 116701 1 A C scaffold7698 ScafM INDEL 0051.scaffold00187 116738 3 ATT ... scaffold7698 ScafM INDEL 0051.scaffold00187 116742 6 GGGGAA ...... scaffold7698 ScafM INDEL 0051.scaffold00187 116749 2 TC .. scaffold7698 ScafM INDEL 0051.scaffold00187 116753 3 AAC ... scaffold7698 ScafM SNP 0051.scaffold00187 116757 1 A G scaffold7698 ReadM SNP 0051.scaffold00187 116766 1 C T - Both SNP 0051.scaffold00187 116785 1 A G scaffold7698 ScafM SNP 0051.scaffold00187 116789 1 C G scaffold7698 ScafM SNP 0051.scaffold00187 116794 1 C G scaffold7698 ScafM SNP 0051.scaffold00187 116800 1 G C scaffold7698 ScafM SNP 0051.scaffold00187 116816 1 C G scaffold7698 ScafM SNP 0051.scaffold00187 116818 1 A G scaffold7698 ScafM SNP 0051.scaffold00187 116829 1 T G scaffold7698 ScafM SNP 0051.scaffold00187 116914 1 T C scaffold7698 ScafM SNP 0051.scaffold00187 116971 1 G A scaffold7698 ScafM SNP 0051.scaffold00187 116973 1 A G scaffold7698 ReadM SNP 0051.scaffold00187 116977 1 A C - ScafM SNP 0051.scaffold00187 116987 1 C T scaffold7698 ReadM SNP 0051.scaffold00187 116990 1 A T - ScafM SNP 0051.scaffold00187 117026 1 G A scaffold7698 ScafM SNP 0051.scaffold00187 117043 1 G C scaffold7698 ScafM SNP 0051.scaffold00187 117051 1 C A scaffold7698 ScafM SNP 0051.scaffold00187 117053 2 TT AG scaffold7698 ScafM SNP 0051.scaffold00187 117056 1 C T scaffold7698 ScafM SNP 0051.scaffold00187 117058 1 A T scaffold7698 ReadM SNP 0051.scaffold00187 117060 1 A C - ScafM INDEL 0051.scaffold00187 117060 4 AAGT .... scaffold7698 Both SNP 0051.scaffold00187 117069 1 A T scaffold7698 ScafM INDEL 0051.scaffold00187 117088 1 . C scaffold7698 ScafM SNP 0051.scaffold00187 117115 1 T C scaffold7698 ReadM SNP 0051.scaffold00187 117161 1 G A - ReadM SNP 0051.scaffold00187 117212 1 T G - ReadM SNP 0051.scaffold00187 117269 1 A G - ReadM SNP 0051.scaffold00187 117354 1 C A - ReadM SNP 0051.scaffold00187 117411 1 G T - ReadM SNP 0051.scaffold00187 118249 1 A T - ReadM SNP 0051.scaffold00187 118258 1 A T - ReadM SNP 0051.scaffold00187 118411 1 G T - ReadM SNP 0051.scaffold00187 118449 1 T C - ReadM SNP 0051.scaffold00187 118500 1 C T - ReadM SNP 0051.scaffold00187 118507 1 C T - ReadM SNP 0051.scaffold00187 118804 1 G A - ReadM SNP 0051.scaffold00187 118967 1 A G - ReadM SNP 0051.scaffold00187 119040 1 A C - ReadM SNP 0051.scaffold00187 119194 1 T A - ReadM SNP 0051.scaffold00187 119238 1 T C - Both SNP 0051.scaffold00187 119265 1 G A scaffold1030 ReadM SNP 0051.scaffold00187 119296 1 G T - ScafM INDEL 0051.scaffold00187 119302 1 C . scaffold1030 ScafM SNP 0051.scaffold00187 119343 4 GGTG AACA scaffold1030 ScafM INDEL 0051.scaffold00187 119348 3 TGG ..C scaffold1030 ScafM SNP 0051.scaffold00187 119354 1 A C scaffold1030 ScafM SNP 0051.scaffold00187 119356 1 G C scaffold1030 ScafM SNP 0051.scaffold00187 119360 3 CAT GCG scaffold1030 ScafM SNP 0051.scaffold00187 119365 1 A G scaffold1030 ScafM INDEL 0051.scaffold00187 119368 3 GGT ..C scaffold1030 ScafM SNP 0051.scaffold00187 119392 1 C T scaffold1030 ScafM SNP 0051.scaffold00187 119402 1 T G scaffold1030 ScafM SNP 0051.scaffold00187 119405 1 G A scaffold1030 ScafM SNP 0051.scaffold00187 119424 1 G A scaffold1030 ScafM SNP 0051.scaffold00187 119442 1 G T scaffold1030 ScafM SNP 0051.scaffold00187 119464 1 C T scaffold1030 ScafM SNP 0051.scaffold00187 119466 1 C G scaffold1030 ScafM SNP 0051.scaffold00187 119485 1 A G scaffold1030 ScafM SNP 0051.scaffold00187 119504 2 TT CC scaffold1030 ScafM SNP 0051.scaffold00187 119513 1 T C scaffold1030 ScafM SNP 0051.scaffold00187 119517 1 T G scaffold1030 ScafM SNP 0051.scaffold00187 119531 1 G A scaffold1030 ScafM SNP 0051.scaffold00187 119535 1 T A scaffold1030 ScafM SNP 0051.scaffold00187 119566 1 A C scaffold1030 ScafM SNP 0051.scaffold00187 119618 2 GA TT scaffold1030 ScafM SNP 0051.scaffold00187 119625 1 C G scaffold1030 ScafM SNP 0051.scaffold00187 119630 1 C T scaffold1030 ReadM SNP 0051.scaffold00187 125675 1 T C - ReadM SNP 0051.scaffold00187 125742 1 C G - ReadM SNP 0051.scaffold00187 125774 1 T A - ScafM SNP 0051.scaffold00187 126087 1 T G scaffold2000 ScafM SNP 0051.scaffold00187 126103 1 A G scaffold2000 ScafM SNP 0051.scaffold00187 126119 1 A T scaffold2000 ReadM SNP 0051.scaffold00187 126296 1 A G - Both SNP 0051.scaffold00187 126321 1 T C scaffold2000 Both SNP 0051.scaffold00187 126342 1 A G scaffold2000 ReadM SNP 0051.scaffold00187 126519 1 A T - ReadM SNP 0051.scaffold00187 126545 1 C A - ReadM SNP 0051.scaffold00187 126750 1 T C - ReadM SNP 0051.scaffold00187 126836 1 A G - ReadM SNP 0051.scaffold00187 126855 1 C A - ReadM SNP 0051.scaffold00187 126997 1 A G - ReadM SNP 0051.scaffold00187 127001 1 A G - ReadM SNP 0051.scaffold00187 127067 1 G A - ReadM SNP 0051.scaffold00187 127102 1 G T - ReadM SNP 0051.scaffold00187 127276 1 T C - ReadM SNP 0051.scaffold00187 127283 1 A G - ReadM SNP 0051.scaffold00187 127562 1 G A - Both SNP 0051.scaffold00187 127611 1 A C scaffold2000 Both SNP 0051.scaffold00187 127632 1 G T scaffold2000 Both SNP 0051.scaffold00187 127804 1 C T scaffold2000 Both SNP 0051.scaffold00187 127914 1 T C scaffold2000 Both SNP 0051.scaffold00187 127950 1 T C scaffold2000 ReadM SNP 0051.scaffold00187 128018 1 A G - ReadM SNP 0051.scaffold00187 128287 1 G T - Both SNP 0051.scaffold00187 128562 1 G A scaffold2000 ScafM SNP 0051.scaffold00187 128565 2 CA TG scaffold2000 Both INDEL 0051.scaffold00187 128634 1 G . scaffold2000 Both SNP 0051.scaffold00187 128647 1 A T scaffold2000 Both SNP 0051.scaffold00187 128715 1 G A scaffold2000 Both SNP 0051.scaffold00187 128736 1 G A scaffold2000 Both SNP 0051.scaffold00187 128786 1 A G scaffold2000 ReadM SNP 0051.scaffold00187 128877 1 G A - ReadM SNP 0051.scaffold00187 128937 1 G A - ReadM SNP 0051.scaffold00187 128954 1 G A - ReadM SNP 0051.scaffold00187 129091 1 T A - ReadM SNP 0051.scaffold00187 129102 1 T G - ReadM SNP 0051.scaffold00187 129139 1 A C - ReadM SNP 0051.scaffold00187 129177 1 G C - ReadM SNP 0051.scaffold00187 129180 1 G A - ReadM SNP 0051.scaffold00187 129345 1 C T - ReadM SNP 0051.scaffold00187 129374 1 C T - ScafM SNP 0051.scaffold00187 129483 2 CG TA scaffold2000 ScafM SNP 0051.scaffold00187 129534 1 C T scaffold2000 ScafM SNP 0051.scaffold00187 129585 1 A G scaffold2000 ScafM SNP 0051.scaffold00187 129616 1 G A scaffold2000 ScafM SNP 0051.scaffold00187 132548 1 T C scaffold1062 ScafM SNP 0051.scaffold00187 132552 1 T C scaffold1062 ScafM SNP 0051.scaffold00187 132562 1 C T scaffold1062 ScafM SNP 0051.scaffold00187 132565 1 T C scaffold1062 ScafM INDEL 0051.scaffold00187 132569 2 TA .. scaffold1062 ScafM SNP 0051.scaffold00187 132573 1 A C scaffold1062 ScafM SNP 0051.scaffold00187 134732 1 C T scaffold1062 ScafM SNP 0051.scaffold00187 134747 1 C T scaffold1062 ReadM SNP 0051.scaffold00187 141393 1 C T - ReadM SNP 0051.scaffold00187 141409 1 T A - ReadM SNP 0051.scaffold00187 141473 1 T A - ReadM SNP 0051.scaffold00187 141767 1 T G - ReadM SNP 0051.scaffold00187 141994 1 T C - ReadM SNP 0051.scaffold00187 142452 1 T C - ReadM SNP 0051.scaffold00187 142828 1 C T - ReadM SNP 0051.scaffold00187 142875 1 C T - ReadM SNP 0051.scaffold00187 143027 1 T C - ScafM SNP 0051.scaffold00187 155427 1 T G scaffold1555 ScafM SNP 0051.scaffold00187 155429 1 C T scaffold1555 ScafM SNP 0051.scaffold00187 155434 1 G C scaffold1555 ScafM SNP 0051.scaffold00187 155463 1 C T scaffold1555 ScafM SNP 0051.scaffold00187 155498 1 G A scaffold1555 ScafM SNP 0051.scaffold00187 155502 1 A G scaffold1555 ScafM SNP 0051.scaffold00187 159081 1 C T scaffold3625 ScafM SNP 0051.scaffold00187 173726 1 G A scaffold1411 ScafM SNP 0051.scaffold00187 173731 1 T A scaffold1411 ScafM SNP 0051.scaffold00187 173763 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 173766 1 A C scaffold1411 ScafM SNP 0051.scaffold00187 173774 1 A G scaffold1411 ScafM SNP 0051.scaffold00187 173792 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 173796 1 A G scaffold1411 ScafM SNP 0051.scaffold00187 173802 1 C T scaffold1411 ScafM SNP 0051.scaffold00187 173834 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 173841 1 C T scaffold1411 ScafM SNP 0051.scaffold00187 173848 1 G A scaffold1411 ScafM SNP 0051.scaffold00187 173852 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 173862 1 C G scaffold1411 ScafM SNP 0051.scaffold00187 173864 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 173875 1 C T scaffold1411 ScafM SNP 0051.scaffold00187 173894 1 A C scaffold1411 ScafM SNP 0051.scaffold00187 174023 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174050 1 G A scaffold1411 ScafM SNP 0051.scaffold00187 174054 1 A G scaffold1411 ScafM SNP 0051.scaffold00187 174060 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174074 1 A G scaffold1411 ScafM SNP 0051.scaffold00187 174096 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174117 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174128 1 A C scaffold1411 ScafM SNP 0051.scaffold00187 174133 1 G A scaffold1411 ScafM SNP 0051.scaffold00187 174155 2 TC CT scaffold1411 ScafM SNP 0051.scaffold00187 174161 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174172 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174180 1 G A scaffold1411 ScafM SNP 0051.scaffold00187 174183 1 C A scaffold1411 ScafM SNP 0051.scaffold00187 174185 2 AT TG scaffold1411 ScafM SNP 0051.scaffold00187 174192 1 G C scaffold1411 ScafM SNP 0051.scaffold00187 174197 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174202 1 T C scaffold1411 ScafM SNP 0051.scaffold00187 174210 1 C A scaffold1411 ReadM SNP 0051.scaffold00187 176136 1 T C - Both SNP 0051.scaffold00187 176398 1 G C scaffold9207 Both SNP 0051.scaffold00187 176565 1 T C scaffold9207 ScafM SNP 0051.scaffold00187 176828 1 C A scaffold9207 Both SNP 0051.scaffold00187 176942 1 G A scaffold9207 Both INDEL 0051.scaffold00187 177273 1 G . scaffold9207 Both SNP 0051.scaffold00187 177383 1 C T scaffold9207 Both SNP 0051.scaffold00187 178005 1 C T scaffold9207 Both SNP 0051.scaffold00187 178235 1 G A scaffold9207 ScafM SNP 0051.scaffold00187 178346 1 T C scaffold9207 ScafM SNP 0051.scaffold00187 178418 1 G A scaffold9207 Both SNP 0051.scaffold00187 178669 1 T C scaffold9207 Both SNP 0051.scaffold00187 178826 1 A G scaffold9207 Both SNP 0051.scaffold00187 179136 1 G A scaffold9207 Both INDEL 0051.scaffold00187 179667 1 . T scaffold9207 ScafM SNP 0051.scaffold00187 179708 1 C T scaffold9207 ReadM SNP 0051.scaffold00187 179717 1 G C - ReadM SNP 0051.scaffold00187 179749 1 C T - ReadM SNP 0051.scaffold00187 180032 1 C A - ReadM SNP 0051.scaffold00187 180096 1 T A - ReadM SNP 0051.scaffold00187 180173 1 G T - ScafM SNP 0051.scaffold00187 182385 1 A G scaffold26996 ScafM SNP 0051.scaffold00187 182401 1 T C scaffold26996 ScafM SNP 0051.scaffold00187 182503 1 C T scaffold26996 ScafM SNP 0051.scaffold00187 182905 1 A C scaffold9207 ReadM SNP 0051.scaffold00187 183244 1 T A - ReadM SNP 0051.scaffold00187 183308 1 T A - ReadM SNP 0051.scaffold00187 183328 1 T C - ReadM SNP 0051.scaffold00187 183600 1 G T - ReadM SNP 0051.scaffold00187 183629 1 G A - ReadM SNP 0051.scaffold00187 183821 1 T A - ReadM SNP 0051.scaffold00187 184057 1 A T - ReadM SNP 0051.scaffold00187 184698 1 T C - ReadM SNP 0051.scaffold00187 184781 1 G A - ReadM SNP 0051.scaffold00187 184865 1 T A - ReadM SNP 0051.scaffold00187 184967 1 T G - ReadM SNP 0051.scaffold00187 185410 1 A T - ReadM SNP 0051.scaffold00187 185670 1 T C - ReadM SNP 0051.scaffold00187 185811 1 T G - ReadM SNP 0051.scaffold00187 186201 1 C T - ReadM SNP 0051.scaffold00187 186437 1 T G - ReadM SNP 0051.scaffold00187 186469 1 A C - ReadM SNP 0051.scaffold00187 186574 2 GG AC - ReadM SNP 0051.scaffold00187 186582 1 G A - ReadM SNP 0051.scaffold00187 187097 1 C T - ReadM SNP 0051.scaffold00187 187250 1 T C - ReadM SNP 0051.scaffold00187 187398 1 C T - ReadM SNP 0051.scaffold00187 187480 1 G C - ReadM SNP 0051.scaffold00187 187614 1 A C - ReadM INDEL 0051.scaffold00187 187748 1 C . - ReadM SNP 0051.scaffold00187 187941 1 T C - ReadM SNP 0051.scaffold00187 188450 1 A G - ReadM SNP 0051.scaffold00187 188692 1 G A - ReadM SNP 0051.scaffold00187 189086 1 T A - ReadM SNP 0051.scaffold00187 189189 1 G A - ReadM SNP 0051.scaffold00187 189217 1 G C - ReadM SNP 0051.scaffold00187 189282 1 C T - ReadM SNP 0051.scaffold00187 189290 1 T C - ReadM INDEL 0051.scaffold00187 189746 1 . A - ReadM SNP 0051.scaffold00187 189757 1 A G - ReadM SNP 0051.scaffold00187 189780 1 G A - ReadM SNP 0051.scaffold00187 189946 1 A G - ReadM SNP 0051.scaffold00187 190211 1 T C - ReadM SNP 0051.scaffold00187 190741 1 A G - ReadM SNP 0051.scaffold00187 191065 1 C G - ReadM SNP 0051.scaffold00187 191110 1 C T - ScafM SNP 0051.scaffold00187 191846 1 T C scaffold4886 ScafM SNP 0051.scaffold00187 191848 1 A G scaffold4886 ScafM SNP 0051.scaffold00187 191882 1 T G scaffold4886 ScafM SNP 0051.scaffold00187 191894 1 G A scaffold4886 ScafM SNP 0051.scaffold00187 191903 1 G C scaffold4886 Both SNP 0051.scaffold00187 191906 1 A G scaffold4886 ReadM SNP 0051.scaffold00187 191964 1 C T - ReadM SNP 0051.scaffold00187 191996 1 G A - ReadM SNP 0051.scaffold00187 192173 1 A C - ReadM SNP 0051.scaffold00187 192274 1 A G - ReadM SNP 0051.scaffold00187 192363 1 A C - ReadM SNP 0051.scaffold00187 192834 1 T C - ReadM SNP 0051.scaffold00187 193016 1 C T - ReadM SNP 0051.scaffold00187 193137 1 A G - ReadM SNP 0051.scaffold00187 193402 1 C T - Both SNP 0051.scaffold00187 193535 1 G T scaffold2563 ScafM SNP 0051.scaffold00187 193727 1 T A scaffold2563 ScafM SNP 0051.scaffold00187 193788 1 C G scaffold2563 ScafM SNP 0051.scaffold00187 193844 1 A G scaffold2563 ScafM INDEL 0051.scaffold00187 194092 4 .... TTTT scaffold2563 Both SNP 0051.scaffold00187 194406 1 T G scaffold2563 Both SNP 0051.scaffold00187 194463 1 G A scaffold2563 Both SNP 0051.scaffold00187 194659 1 T G scaffold2563 ScafM SNP 0051.scaffold00187 194899 1 T C scaffold2563 ReadM SNP 0051.scaffold00187 195301 1 A G - ReadM SNP 0051.scaffold00187 195456 1 A G - Both SNP 0051.scaffold00187 195829 1 G A scaffold2563 Both SNP 0051.scaffold00187 195942 1 A G scaffold2563 ScafM SNP 0051.scaffold00187 195960 1 C A scaffold2563 ReadM SNP 0051.scaffold00187 196162 1 G C - Both INDEL 0051.scaffold00187 197120 1 . T scaffold2563 Both SNP 0051.scaffold00187 197147 1 G C scaffold2563 Both SNP 0051.scaffold00187 197161 1 C T scaffold2563 Both SNP 0051.scaffold00187 197261 1 C A scaffold2563 ScafM INDEL 0051.scaffold00187 197333 4 GTTG .... scaffold2563 Both SNP 0051.scaffold00187 197590 1 G A scaffold2563 Both SNP 0051.scaffold00187 197847 1 C T scaffold2563 Both SNP 0051.scaffold00187 198364 1 A G scaffold2563 Both SNP 0051.scaffold00187 198799 1 A T scaffold2563 Both SNP 0051.scaffold00187 198941 1 A G scaffold2563 Both SNP 0051.scaffold00187 199278 1 A G scaffold2563 Both SNP 0051.scaffold00187 199291 1 T G scaffold2563 Both SNP 0051.scaffold00187 199354 1 G A scaffold2563 Both SNP 0051.scaffold00187 199387 1 A G scaffold2563 Both SNP 0051.scaffold00187 199718 1 T G scaffold2563 Both SNP 0051.scaffold00187 199974 1 T C scaffold2563 ScafM SNP 0051.scaffold00187 200403 1 A T scaffold2563 Both SNP 0051.scaffold00187 200549 1 T C scaffold2563 Both SNP 0051.scaffold00187 200557 1 T C scaffold2563 Both SNP 0051.scaffold00187 201018 1 T C scaffold2563 Both SNP 0051.scaffold00187 201047 1 T A scaffold2563 Both SNP 0051.scaffold00187 202744 1 C T scaffold2563 Both SNP 0051.scaffold00187 202859 1 A G scaffold2563 ScafM SNP 0051.scaffold00187 202984 1 T C scaffold2563 ReadM SNP 0051.scaffold00187 203312 1 G A - ReadM SNP 0051.scaffold00187 203897 1 C T - ReadM SNP 0051.scaffold00187 203965 1 C T - ReadM SNP 0051.scaffold00187 204027 1 A C - ReadM SNP 0051.scaffold00187 204107 1 A G - ReadM SNP 0051.scaffold00187 204488 1 C T - ReadM SNP 0051.scaffold00187 204793 1 A T - ReadM INDEL 0051.scaffold00187 205179 1 . T - ScafM SNP 0051.scaffold00187 205473 1 G C scaffold2563 ScafM SNP 0051.scaffold00187 205904 1 T A scaffold2563 ScafM SNP 0051.scaffold00187 206678 1 G A scaffold2563 Both SNP 0051.scaffold00187 206794 1 G T scaffold2563 ScafM SNP 0051.scaffold00187 207128 1 C T scaffold2563 Both SNP 0051.scaffold00187 207279 1 T G scaffold2563 ReadM SNP 0051.scaffold00187 210396 1 A G - ReadM SNP 0051.scaffold00187 210486 1 G A - ReadM SNP 0051.scaffold00187 210509 1 A C - ReadM SNP 0051.scaffold00187 210574 1 A T - ReadM SNP 0051.scaffold00187 210840 1 C A - Both SNP 0051.scaffold00187 210884 1 C T scaffold2563 Both SNP 0051.scaffold00187 211073 1 A G scaffold2563 Both SNP 0051.scaffold00187 211238 1 C T scaffold2563 Both SNP 0051.scaffold00187 211322 1 G C scaffold2563 ReadM SNP 0051.scaffold00187 211470 1 T C - Both SNP 0051.scaffold00187 211946 1 C T scaffold2563 ScafM SNP 0051.scaffold00187 213616 1 C G scaffold3706 Both SNP 0051.scaffold00187 214227 1 A G scaffold3706 Both SNP 0051.scaffold00187 214661 1 A G scaffold3706 Both INDEL 0051.scaffold00187 214781 1 . T scaffold3706 Both SNP 0051.scaffold00187 214906 1 A C scaffold3706 ReadM SNP 0051.scaffold00187 214991 1 G A - ReadM SNP 0051.scaffold00187 215022 1 G C - ReadM SNP 0051.scaffold00187 215036 1 C T - ReadM INDEL 0051.scaffold00187 215052 1 A . - ReadM SNP 0051.scaffold00187 215195 1 C T - ReadM SNP 0051.scaffold00187 215652 1 T C - ReadM SNP 0051.scaffold00187 215717 1 A G - ReadM SNP 0051.scaffold00187 215761 1 C T - ReadM INDEL 0051.scaffold00187 216546 1 A . - ReadM SNP 0051.scaffold00187 216747 1 A C - ReadM SNP 0051.scaffold00187 216935 1 G T - ReadM SNP 0051.scaffold00187 217213 1 T C - ReadM SNP 0051.scaffold00187 218335 1 C T - ReadM SNP 0051.scaffold00187 218343 1 A G - ReadM SNP 0051.scaffold00187 218449 1 A C - ReadM SNP 0051.scaffold00187 218480 1 A T - ReadM SNP 0051.scaffold00187 218699 1 G T - Both SNP 0051.scaffold00187 219109 1 C T scaffold3706 ScafM SNP 0051.scaffold00187 219327 1 C T scaffold3706 Both SNP 0051.scaffold00187 219500 1 A G scaffold3706 Both SNP 0051.scaffold00187 219886 1 T C scaffold3706 Both SNP 0051.scaffold00187 220076 1 A T scaffold3706 Both SNP 0051.scaffold00187 220171 1 G A scaffold3706 Both SNP 0051.scaffold00187 220277 1 C G scaffold3706 ReadM SNP 0051.scaffold00187 220716 1 C T - ReadM SNP 0051.scaffold00187 220890 1 A G - ScafM INDEL 0051.scaffold00187 221262 1 . T scaffold3706 ReadM INDEL 0051.scaffold00187 221270 1 . T - ReadM SNP 0051.scaffold00187 221514 1 G A - ReadM SNP 0051.scaffold00187 221670 1 C T - ReadM INDEL 0051.scaffold00187 221806 1 A . - ReadM SNP 0051.scaffold00187 222182 1 A G - Both SNP 0051.scaffold00187 222213 1 A T scaffold3706 Both SNP 0051.scaffold00187 222492 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 223305 1 C T scaffold1922 ScafM SNP 0051.scaffold00187 223354 1 C T scaffold1922 ScafM INDEL 0051.scaffold00187 223356 1 A . scaffold1922 ScafM SNP 0051.scaffold00187 223377 2 AG GC scaffold1922 ScafM SNP 0051.scaffold00187 223380 1 G A scaffold1922 ScafM SNP 0051.scaffold00187 223395 1 G A scaffold1922 ScafM SNP 0051.scaffold00187 223398 1 A G scaffold1922 ScafM SNP 0051.scaffold00187 223406 1 A G scaffold1922 ScafM SNP 0051.scaffold00187 223413 1 T G scaffold1922 ScafM SNP 0051.scaffold00187 223429 1 T A scaffold1922 ReadM INDEL 0051.scaffold00187 224319 1 A . - ReadM SNP 0051.scaffold00187 224589 1 T C - ReadM SNP 0051.scaffold00187 224611 1 C A - ReadM SNP 0051.scaffold00187 224938 1 T A - ReadM SNP 0051.scaffold00187 224978 1 A G - ReadM SNP 0051.scaffold00187 225252 1 C T - ReadM SNP 0051.scaffold00187 225281 1 G A - ReadM SNP 0051.scaffold00187 225946 1 G A - ReadM INDEL 0051.scaffold00187 226015 1 T . - ReadM SNP 0051.scaffold00187 226486 1 G C - ReadM SNP 0051.scaffold00187 226821 1 T C - ReadM SNP 0051.scaffold00187 227210 1 A G - ReadM SNP 0051.scaffold00187 227990 1 A C - ReadM SNP 0051.scaffold00187 228223 1 G C - ReadM SNP 0051.scaffold00187 228584 1 G A - Both SNP 0051.scaffold00187 228826 1 A G scaffold3706 ReadM SNP 0051.scaffold00187 228920 1 A T - ReadM SNP 0051.scaffold00187 229487 1 A G - ReadM SNP 0051.scaffold00187 229509 1 T C - ReadM SNP 0051.scaffold00187 229626 1 G T - ReadM INDEL 0051.scaffold00187 229748 1 A . - ReadM SNP 0051.scaffold00187 229899 1 G C - ReadM SNP 0051.scaffold00187 230328 1 T C - ReadM SNP 0051.scaffold00187 230547 1 G A - ReadM SNP 0051.scaffold00187 230555 1 G C - ReadM SNP 0051.scaffold00187 230983 1 A T - ReadM INDEL 0051.scaffold00187 231017 1 . A - ReadM SNP 0051.scaffold00187 231862 1 T A - ReadM SNP 0051.scaffold00187 232157 1 A G - ReadM SNP 0051.scaffold00187 232247 1 G T - ReadM SNP 0051.scaffold00187 232949 1 C T - ReadM SNP 0051.scaffold00187 233169 1 A G - ReadM SNP 0051.scaffold00187 233212 1 T A - Both SNP 0051.scaffold00187 233662 1 C T scaffold3706 Both SNP 0051.scaffold00187 233770 1 C G scaffold3706 ScafM INDEL 0051.scaffold00187 234454 9 ......... ATGTCTCCG scaffold3706 ScafM INDEL 0051.scaffold00187 234861 1 . A scaffold3706 Both INDEL 0051.scaffold00187 235083 1 . T scaffold3706 ReadM SNP 0051.scaffold00187 235364 1 A G - Both SNP 0051.scaffold00187 235434 1 T C scaffold3706 Both INDEL 0051.scaffold00187 235538 1 A . scaffold3706 Both SNP 0051.scaffold00187 235564 1 G A scaffold3706 ReadM SNP 0051.scaffold00187 235598 1 G A - Both SNP 0051.scaffold00187 236078 1 T G scaffold3706 ReadM SNP 0051.scaffold00187 236581 1 A T - ReadM SNP 0051.scaffold00187 236620 1 A G - ReadM SNP 0051.scaffold00187 237544 1 G A - ScafM SNP 0051.scaffold00187 237869 1 A G scaffold3706 ScafM SNP 0051.scaffold00187 237903 1 T A scaffold3706 ScafM SNP 0051.scaffold00187 237924 1 G C scaffold3706 ScafM SNP 0051.scaffold00187 237926 1 C A scaffold3706 Both SNP 0051.scaffold00187 238156 1 G A scaffold3706 Both SNP 0051.scaffold00187 238158 1 C T scaffold3706 ScafM INDEL 0051.scaffold00187 238469 3 ... AAA scaffold3706 Both SNP 0051.scaffold00187 238538 1 C T scaffold3706 Both SNP 0051.scaffold00187 238711 1 G C scaffold3706 Both SNP 0051.scaffold00187 238796 1 A C scaffold3706 Both INDEL 0051.scaffold00187 238863 1 A . scaffold3706 ScafM INDEL 0051.scaffold00187 238985 4 .... GAGT scaffold3706 Both SNP 0051.scaffold00187 239232 1 A G scaffold3706 Both SNP 0051.scaffold00187 239259 1 A C scaffold3706 Both SNP 0051.scaffold00187 239262 1 G A scaffold3706 Both SNP 0051.scaffold00187 239289 1 A G scaffold3706 Both SNP 0051.scaffold00187 239342 1 G A scaffold3706 Both SNP 0051.scaffold00187 239352 1 C T scaffold3706 Both SNP 0051.scaffold00187 239388 1 A G scaffold3706 Both SNP 0051.scaffold00187 239949 1 G A scaffold3706 Both SNP 0051.scaffold00187 240228 1 G A scaffold3706 Both SNP 0051.scaffold00187 240233 1 T G scaffold3706 ScafM SNP 0051.scaffold00187 240270 1 A G scaffold3706 Both SNP 0051.scaffold00187 240399 1 G A scaffold3706 Both SNP 0051.scaffold00187 240405 1 G T scaffold3706 ScafM SNP 0051.scaffold00187 240426 1 G T scaffold3706 ScafM SNP 0051.scaffold00187 240445 1 A G scaffold3706 ScafM SNP 0051.scaffold00187 240469 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 240480 1 T C scaffold3706 ScafM SNP 0051.scaffold00187 240515 1 A G scaffold3706 ScafM SNP 0051.scaffold00187 240519 1 T C scaffold3706 ScafM INDEL 0051.scaffold00187 240532 1 A . scaffold3706 ScafM INDEL 0051.scaffold00187 240784 1 A . scaffold3706 ScafM INDEL 0051.scaffold00187 240789 1 A . scaffold3706 ScafM SNP 0051.scaffold00187 241011 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 241042 1 A G scaffold3706 ScafM SNP 0051.scaffold00187 241094 1 T C scaffold3706 ScafM SNP 0051.scaffold00187 241102 1 A T scaffold3706 ScafM SNP 0051.scaffold00187 241107 1 T C scaffold3706 ScafM SNP 0051.scaffold00187 241111 1 T C scaffold3706 ScafM SNP 0051.scaffold00187 241123 1 C T scaffold3706 ScafM SNP 0051.scaffold00187 241129 1 T C scaffold3706 ScafM INDEL 0051.scaffold00187 241455 2 .. AA scaffold3706 ScafM SNP 0051.scaffold00187 241519 1 C G scaffold3706 ScafM INDEL 0051.scaffold00187 241580 6 CAATAA ...... scaffold3706 ScafM SNP 0051.scaffold00187 241600 1 T C scaffold3706 ScafM SNP 0051.scaffold00187 241612 1 A T scaffold3706 ScafM SNP 0051.scaffold00187 241615 1 T G scaffold3706 ScafM INDEL 0051.scaffold00187 241692 3 ... AAA scaffold3706 ScafM SNP 0051.scaffold00187 241706 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 241737 1 T G scaffold3706 ScafM SNP 0051.scaffold00187 241880 1 T A scaffold3706 Both INDEL 0051.scaffold00187 241887 1 A . scaffold3706 ScafM INDEL 0051.scaffold00187 241968 1 G . scaffold3706 ScafM SNP 0051.scaffold00187 242000 1 T G scaffold3706 ScafM SNP 0051.scaffold00187 242557 1 A T scaffold3706 ScafM SNP 0051.scaffold00187 242565 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 242954 2 TG CA scaffold3706 ScafM SNP 0051.scaffold00187 243709 1 T C scaffold3706 ScafM INDEL 0051.scaffold00187 243713 15 AGTAATGAATTATTA ............... scaffold3706 ScafM SNP 0051.scaffold00187 244048 2 AA TT scaffold3706 Both SNP 0051.scaffold00187 244104 1 G A scaffold3706 Both SNP 0051.scaffold00187 244462 1 C T scaffold3706 ReadM SNP 0051.scaffold00187 244819 1 C T - ReadM SNP 0051.scaffold00187 244836 1 C A - ReadM SNP 0051.scaffold00187 244884 1 T A - ReadM SNP 0051.scaffold00187 244918 1 A T - ReadM SNP 0051.scaffold00187 244985 1 A C - ReadM SNP 0051.scaffold00187 245066 1 T G - ReadM SNP 0051.scaffold00187 245197 1 C T - ReadM SNP 0051.scaffold00187 245246 1 T C - ReadM SNP 0051.scaffold00187 245285 1 A T - ReadM SNP 0051.scaffold00187 245315 1 C G - ReadM SNP 0051.scaffold00187 245325 1 A G - ReadM SNP 0051.scaffold00187 245465 1 G T - ReadM SNP 0051.scaffold00187 245537 1 G A - ReadM SNP 0051.scaffold00187 245719 1 A G - Both SNP 0051.scaffold00187 245740 1 A G scaffold3706 ReadM SNP 0051.scaffold00187 245850 1 C A - ReadM SNP 0051.scaffold00187 245971 1 T C - ReadM SNP 0051.scaffold00187 246021 1 T G - ReadM SNP 0051.scaffold00187 246043 1 T C - ScafM SNP 0051.scaffold00187 246098 1 T C scaffold3706 ReadM SNP 0051.scaffold00187 246430 1 C A - ReadM INDEL 0051.scaffold00187 246527 1 . T - ScafM SNP 0051.scaffold00187 246941 1 G A scaffold3706 ScafM SNP 0051.scaffold00187 246996 1 C A scaffold3706 ScafM SNP 0051.scaffold00187 247017 1 T G scaffold3706 ScafM SNP 0051.scaffold00187 247147 1 T A scaffold3706 ScafM SNP 0051.scaffold00187 247150 2 CA GG scaffold3706 ScafM SNP 0051.scaffold00187 247159 1 T G scaffold3706 ScafM SNP 0051.scaffold00187 247197 1 A G scaffold3706 ScafM SNP 0051.scaffold00187 247207 1 A G scaffold3706 ScafM INDEL 0051.scaffold00187 247321 1 A . scaffold3706 ScafM INDEL 0051.scaffold00187 247352 9 ......... TTTTTTTTT scaffold3706 ReadM SNP 0051.scaffold00187 247435 1 G A - ScafM SNP 0051.scaffold00187 247651 1 C T scaffold3706 Both INDEL 0051.scaffold00187 247872 1 C . scaffold3706 ScafM SNP 0051.scaffold00187 247874 1 C T scaffold3706 ReadM SNP 0051.scaffold00187 247956 1 T A - ReadM SNP 0051.scaffold00187 247967 1 G A - ReadM SNP 0051.scaffold00187 247990 1 C T - ReadM SNP 0051.scaffold00187 248071 1 A G - ReadM SNP 0051.scaffold00187 248175 1 C A - ReadM INDEL 0051.scaffold00187 248208 1 T . - ReadM INDEL 0051.scaffold00187 248554 1 T . - ScafM SNP 0051.scaffold00187 248693 1 A G scaffold3706 Both SNP 0051.scaffold00187 248722 1 C A scaffold3706 ScafM SNP 0051.scaffold00187 248791 1 T A scaffold3706 ScafM SNP 0051.scaffold00187 248804 1 C T scaffold3706 ReadM SNP 0051.scaffold00187 248900 1 C A - ReadM SNP 0051.scaffold00187 248982 1 C G - ReadM SNP 0051.scaffold00187 248989 1 A T - ReadM SNP 0051.scaffold00187 249146 1 C T - ReadM SNP 0051.scaffold00187 249298 1 T C - ReadM SNP 0051.scaffold00187 249304 1 C T - ScafM SNP 0051.scaffold00187 249910 1 C G scaffold3706 Both SNP 0051.scaffold00187 249977 1 C T scaffold3706 Both SNP 0051.scaffold00187 250348 1 C T scaffold3706 ReadM SNP 0051.scaffold00187 250411 1 A T - ReadM SNP 0051.scaffold00187 250479 1 A G - Both INDEL 0051.scaffold00187 250573 1 A . scaffold3706 ReadM SNP 0051.scaffold00187 250788 1 C A - Both SNP 0051.scaffold00187 250890 1 T C scaffold3706 ReadM SNP 0051.scaffold00187 251024 1 C T - ReadM SNP 0051.scaffold00187 251279 1 T C - ReadM SNP 0051.scaffold00187 251292 1 A T - Both INDEL 0051.scaffold00187 251325 1 G . scaffold3706 ReadM SNP 0051.scaffold00187 251458 1 T C - ReadM SNP 0051.scaffold00187 251569 1 T C - ReadM SNP 0051.scaffold00187 251671 1 A G - ReadM SNP 0051.scaffold00187 251685 1 C T - ReadM SNP 0051.scaffold00187 251781 1 T C - ReadM SNP 0051.scaffold00187 251830 1 T C - ReadM SNP 0051.scaffold00187 251876 1 A T - ReadM INDEL 0051.scaffold00187 251931 1 . T - ReadM SNP 0051.scaffold00187 252104 1 G A - ReadM SNP 0051.scaffold00187 252234 1 T C - ReadM SNP 0051.scaffold00187 252615 1 G A - ReadM SNP 0051.scaffold00187 252691 1 A G - ReadM SNP 0051.scaffold00187 252740 1 C T - ReadM SNP 0051.scaffold00187 252772 1 T A - ReadM SNP 0051.scaffold00187 252835 1 T C - ReadM SNP 0051.scaffold00187 252927 1 A G - ReadM SNP 0051.scaffold00187 252955 1 C T - ReadM SNP 0051.scaffold00187 252996 1 G A - Both SNP 0051.scaffold00187 253240 1 C G scaffold3706 ScafM SNP 0051.scaffold00187 253381 1 T C scaffold3706 ScafM INDEL 0051.scaffold00187 253390 4 TTTG .... scaffold3706 Both SNP 0051.scaffold00187 253531 1 G A scaffold3706 ReadM SNP 0051.scaffold00187 253603 1 C T - ReadM SNP 0051.scaffold00187 253660 1 T G - ReadM SNP 0051.scaffold00187 253800 1 G A - Both SNP 0051.scaffold00187 254079 1 C T scaffold3706 Both SNP 0051.scaffold00187 254361 1 T C scaffold3706 Both SNP 0051.scaffold00187 254480 1 C T scaffold3706 Both SNP 0051.scaffold00187 254502 1 C G scaffold3706 ReadM SNP 0051.scaffold00187 254565 1 C G - ReadM SNP 0051.scaffold00187 254589 1 C T - ReadM SNP 0051.scaffold00187 254623 1 C T - ReadM SNP 0051.scaffold00187 254763 1 A C - ReadM SNP 0051.scaffold00187 254922 1 T C - ReadM SNP 0051.scaffold00187 255047 1 C T - ReadM SNP 0051.scaffold00187 255257 1 A T - ReadM SNP 0051.scaffold00187 255443 1 G A - ReadM SNP 0051.scaffold00187 255451 1 G A - ReadM SNP 0051.scaffold00187 255545 1 T A - ReadM SNP 0051.scaffold00187 255557 1 G A - ReadM SNP 0051.scaffold00187 255967 1 A G - ReadM SNP 0051.scaffold00187 256033 1 T C - ReadM SNP 0051.scaffold00187 256090 1 T C - ReadM SNP 0051.scaffold00187 257043 1 A G - ReadM SNP 0051.scaffold00187 257060 1 A C - ReadM SNP 0051.scaffold00187 257520 1 C T - ReadM SNP 0051.scaffold00187 257550 1 A C - ReadM SNP 0051.scaffold00187 257626 1 A G - ReadM SNP 0051.scaffold00187 257850 1 C T - ReadM SNP 0051.scaffold00187 257867 1 A G - ReadM SNP 0051.scaffold00187 258012 1 A C - ReadM SNP 0051.scaffold00187 259207 1 A C - ReadM SNP 0051.scaffold00187 259224 1 A C - ReadM SNP 0051.scaffold00187 259257 1 C T - ReadM SNP 0051.scaffold00187 259327 1 C T - ReadM INDEL 0051.scaffold00187 259330 1 T . - ReadM SNP 0051.scaffold00187 259366 2 AT GC - ReadM SNP 0051.scaffold00187 259450 1 T C - ReadM SNP 0051.scaffold00187 259784 1 G T - ReadM SNP 0051.scaffold00187 259817 1 A G - ReadM SNP 0051.scaffold00187 259996 1 T G - ReadM SNP 0051.scaffold00187 260022 1 A G - ReadM SNP 0051.scaffold00187 260041 1 C T - ReadM SNP 0051.scaffold00187 260157 1 T A - ReadM SNP 0051.scaffold00187 260244 1 G A - ReadM SNP 0051.scaffold00187 260353 1 T C - ReadM SNP 0051.scaffold00187 260608 1 T C - ReadM SNP 0051.scaffold00187 260659 1 G C - ReadM SNP 0051.scaffold00187 260706 1 C G - ReadM SNP 0051.scaffold00187 260747 1 T C - ReadM SNP 0051.scaffold00187 260763 1 A G - ReadM SNP 0051.scaffold00187 260780 1 G A - ReadM SNP 0051.scaffold00187 260873 1 A C - ReadM SNP 0051.scaffold00187 260902 1 C A - ReadM SNP 0051.scaffold00187 260984 1 C T - ReadM INDEL 0051.scaffold00187 261247 1 . A - ReadM SNP 0051.scaffold00187 261326 1 C T - ReadM SNP 0051.scaffold00187 261573 1 C T - ReadM SNP 0051.scaffold00187 261672 1 A G - ReadM SNP 0051.scaffold00187 261695 1 C T - ReadM SNP 0051.scaffold00187 261726 1 G C - ReadM SNP 0051.scaffold00187 261855 1 G A - ReadM SNP 0051.scaffold00187 262111 1 G A - ReadM SNP 0051.scaffold00187 262143 1 G T - ReadM SNP 0051.scaffold00187 262260 1 C T - ReadM SNP 0051.scaffold00187 262267 1 A G - ReadM SNP 0051.scaffold00187 262330 1 A G - ReadM SNP 0051.scaffold00187 262751 1 C A - ReadM SNP 0051.scaffold00187 262849 1 G A - ReadM SNP 0051.scaffold00187 262884 1 C T - ReadM SNP 0051.scaffold00187 263072 1 A C - ReadM SNP 0051.scaffold00187 263106 1 A T - ReadM SNP 0051.scaffold00187 263135 1 A G - ReadM SNP 0051.scaffold00187 263226 1 T A - ReadM SNP 0051.scaffold00187 263228 1 G A - ReadM SNP 0051.scaffold00187 263268 1 G A - ReadM SNP 0051.scaffold00187 263326 1 A G - ReadM SNP 0051.scaffold00187 263484 1 T C - ReadM SNP 0051.scaffold00187 263508 1 C T - ReadM SNP 0051.scaffold00187 263566 1 C T - ReadM SNP 0051.scaffold00187 263773 1 A G - ReadM SNP 0051.scaffold00187 263850 1 C T - ReadM SNP 0051.scaffold00187 263881 1 G T - ReadM SNP 0051.scaffold00187 264056 1 G A - ReadM SNP 0051.scaffold00187 264109 1 T C - ReadM SNP 0051.scaffold00187 264154 2 GG AA - ReadM SNP 0051.scaffold00187 264694 1 C T - ReadM SNP 0051.scaffold00187 264830 1 A G - ReadM SNP 0051.scaffold00187 264909 1 T C - ReadM SNP 0051.scaffold00187 264957 1 G C - ReadM INDEL 0051.scaffold00187 265032 1 . C - ReadM SNP 0051.scaffold00187 265049 1 C T - ReadM SNP 0051.scaffold00187 265286 1 G A - ReadM SNP 0051.scaffold00187 265774 1 A G - ReadM SNP 0051.scaffold00187 265781 1 T C - ReadM SNP 0051.scaffold00187 265932 1 A G - ReadM SNP 0051.scaffold00187 265937 1 T A - ScafM INDEL 0051.scaffold00187 265964 2 .. AA scaffold18 ScafM SNP 0051.scaffold00187 265978 1 G A scaffold18 ScafM SNP 0051.scaffold00187 265986 1 C T scaffold18 Both INDEL 0051.scaffold00187 266084 2 AT .. scaffold18 Both SNP 0051.scaffold00187 266219 1 C T scaffold18 Both SNP 0051.scaffold00187 266456 1 A G scaffold18 ScafM SNP 0051.scaffold00187 266578 1 A G scaffold18 Both SNP 0051.scaffold00187 266622 1 G T scaffold18 Both SNP 0051.scaffold00187 266634 1 C G scaffold18 Both SNP 0051.scaffold00187 266718 1 T G scaffold18 Both INDEL 0051.scaffold00187 266951 1 . A scaffold18 Both SNP 0051.scaffold00187 266976 1 A T scaffold18 Both SNP 0051.scaffold00187 267239 1 G A scaffold18 Both SNP 0051.scaffold00187 267245 1 C T scaffold18 ReadM INDEL 0051.scaffold00187 267378 1 . A - ReadM SNP 0051.scaffold00187 267630 1 T A - ReadM SNP 0051.scaffold00187 267841 1 A G - ReadM SNP 0051.scaffold00187 268179 1 T C - ReadM SNP 0051.scaffold00187 268203 1 A G - Both SNP 0051.scaffold00187 268404 1 G T scaffold18 Both SNP 0051.scaffold00187 268432 1 A G scaffold18 ReadM SNP 0051.scaffold00187 268651 1 A C - ReadM SNP 0051.scaffold00187 268705 1 T C - ReadM SNP 0051.scaffold00187 269711 1 C T - ReadM SNP 0051.scaffold00187 269713 1 A G - ReadM SNP 0051.scaffold00187 269917 1 T C - ReadM SNP 0051.scaffold00187 269922 1 T C - ReadM SNP 0051.scaffold00187 269935 1 G A - ReadM SNP 0051.scaffold00187 270048 1 T C - ReadM SNP 0051.scaffold00187 270123 1 A C - ReadM SNP 0051.scaffold00187 270200 1 A C - ReadM SNP 0051.scaffold00187 270216 1 A T - ReadM SNP 0051.scaffold00187 270401 1 T C - ReadM SNP 0051.scaffold00187 270451 1 C T - ReadM SNP 0051.scaffold00187 270500 1 T C - ReadM SNP 0051.scaffold00187 270725 1 G A - Both SNP 0051.scaffold00187 270894 1 A C scaffold18 Both SNP 0051.scaffold00187 270966 1 A T scaffold18 Both SNP 0051.scaffold00187 270995 1 A C scaffold18 Both SNP 0051.scaffold00187 271114 1 G T scaffold18 Both SNP 0051.scaffold00187 271153 1 T C scaffold18 Both INDEL 0051.scaffold00187 271193 1 A . scaffold18 Both SNP 0051.scaffold00187 271233 1 A G scaffold18 Both SNP 0051.scaffold00187 271242 1 G A scaffold18 Both SNP 0051.scaffold00187 271294 1 A C scaffold18 Both SNP 0051.scaffold00187 271338 1 G T scaffold18 Both SNP 0051.scaffold00187 271530 1 A G scaffold18 Both INDEL 0051.scaffold00187 271596 2 .. TA scaffold18 Both SNP 0051.scaffold00187 271604 1 T A scaffold18 ReadM SNP 0051.scaffold00187 271662 1 T C - ReadM SNP 0051.scaffold00187 271683 1 A T - ReadM SNP 0051.scaffold00187 271690 1 G A - ReadM SNP 0051.scaffold00187 271781 1 G A - ReadM INDEL 0051.scaffold00187 271969 1 . A - ReadM SNP 0051.scaffold00187 272006 1 T C - ReadM SNP 0051.scaffold00187 272095 1 C A - ReadM SNP 0051.scaffold00187 272111 1 G T - ScafM INDEL 0051.scaffold00187 272334 1 A . scaffold18 Both SNP 0051.scaffold00187 272498 1 G A scaffold18 ScafM SNP 0051.scaffold00187 272509 1 A C scaffold18 ScafM SNP 0051.scaffold00187 272540 1 T A scaffold18 ScafM SNP 0051.scaffold00187 272566 1 G T scaffold18 ScafM SNP 0051.scaffold00187 272597 1 C T scaffold18 ScafM SNP 0051.scaffold00187 272903 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 272953 4 CGAT .... scaffold18 Both SNP 0051.scaffold00187 272998 1 A T scaffold18 Both SNP 0051.scaffold00187 273015 1 T C scaffold18 Both INDEL 0051.scaffold00187 273113 1 A . scaffold18 ReadM SNP 0051.scaffold00187 273246 1 T A - ReadM SNP 0051.scaffold00187 273274 1 C G - ScafM SNP 0051.scaffold00187 273769 1 T G scaffold18 ScafM SNP 0051.scaffold00187 273776 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 273904 2 .. TT scaffold18 ScafM SNP 0051.scaffold00187 273906 1 T G scaffold18 ScafM SNP 0051.scaffold00187 273908 1 G C scaffold18 ScafM SNP 0051.scaffold00187 273964 1 T C scaffold18 ScafM SNP 0051.scaffold00187 274014 1 C G scaffold18 ScafM SNP 0051.scaffold00187 274019 1 T A scaffold18 ScafM SNP 0051.scaffold00187 274052 1 G T scaffold18 ScafM SNP 0051.scaffold00187 274107 1 T C scaffold18 ScafM SNP 0051.scaffold00187 274145 1 C T scaffold18 ScafM SNP 0051.scaffold00187 274148 1 G T scaffold18 Both SNP 0051.scaffold00187 274197 1 C A scaffold18 Both SNP 0051.scaffold00187 274338 1 C T scaffold18 Both SNP 0051.scaffold00187 274420 1 A T scaffold18 Both SNP 0051.scaffold00187 274430 1 C A scaffold18 ScafM INDEL 0051.scaffold00187 274689 19 TTTCCAGAACTAATAAATC ................... scaffold18 Both SNP 0051.scaffold00187 274766 1 A T scaffold18 Both SNP 0051.scaffold00187 274834 1 C G scaffold18 Both SNP 0051.scaffold00187 274960 1 C T scaffold18 ScafM SNP 0051.scaffold00187 274969 1 C T scaffold18 Both SNP 0051.scaffold00187 275006 1 A T scaffold18 Both INDEL 0051.scaffold00187 275057 1 . C scaffold18 ScafM SNP 0051.scaffold00187 275111 1 C T scaffold18 ScafM SNP 0051.scaffold00187 275118 1 G A scaffold18 ScafM SNP 0051.scaffold00187 275128 1 G T scaffold18 Both SNP 0051.scaffold00187 275149 1 G T scaffold18 Both SNP 0051.scaffold00187 275206 1 C T scaffold18 Both SNP 0051.scaffold00187 275244 1 G A scaffold18 ScafM SNP 0051.scaffold00187 275277 1 G A scaffold18 ScafM INDEL 0051.scaffold00187 275296 2 .. GA scaffold18 ScafM INDEL 0051.scaffold00187 275309 1 . T scaffold18 Both SNP 0051.scaffold00187 275373 1 T G scaffold18 Both SNP 0051.scaffold00187 275419 1 A G scaffold18 Both SNP 0051.scaffold00187 275466 1 C T scaffold18 Both SNP 0051.scaffold00187 275499 1 A G scaffold18 ScafM SNP 0051.scaffold00187 275531 1 A T scaffold18 Both INDEL 0051.scaffold00187 275540 1 T . scaffold18 ReadM SNP 0051.scaffold00187 275590 1 C A - ReadM SNP 0051.scaffold00187 275715 1 G T - ReadM SNP 0051.scaffold00187 275870 1 C T - ReadM SNP 0051.scaffold00187 276012 1 G T - ReadM SNP 0051.scaffold00187 276086 1 T C - ReadM SNP 0051.scaffold00187 276193 1 G T - ReadM SNP 0051.scaffold00187 276286 1 C T - ReadM SNP 0051.scaffold00187 276393 1 A G - ReadM SNP 0051.scaffold00187 276444 1 A T - ReadM SNP 0051.scaffold00187 276462 1 A T - ReadM SNP 0051.scaffold00187 276492 1 T G - ReadM SNP 0051.scaffold00187 276550 1 T A - ReadM SNP 0051.scaffold00187 276561 1 T C - ReadM SNP 0051.scaffold00187 276714 1 T G - ReadM SNP 0051.scaffold00187 276838 1 C T - ReadM SNP 0051.scaffold00187 276858 1 T A - ReadM SNP 0051.scaffold00187 276910 1 G C - ReadM SNP 0051.scaffold00187 276948 1 T A - ReadM SNP 0051.scaffold00187 276955 1 C G - ReadM SNP 0051.scaffold00187 276981 1 A G - Both SNP 0051.scaffold00187 277097 1 A G scaffold18 ScafM INDEL 0051.scaffold00187 277173 6 TTACTC ...... scaffold18 Both INDEL 0051.scaffold00187 277212 1 . C scaffold18 Both SNP 0051.scaffold00187 277296 1 C G scaffold18 Both SNP 0051.scaffold00187 277366 1 A G scaffold18 Both INDEL 0051.scaffold00187 277426 1 . T scaffold18 Both SNP 0051.scaffold00187 277448 1 C G scaffold18 Both SNP 0051.scaffold00187 277453 1 G C scaffold18 Both SNP 0051.scaffold00187 277502 1 A T scaffold18 ScafM INDEL 0051.scaffold00187 277608 1 . T scaffold18 ScafM SNP 0051.scaffold00187 277622 1 A T scaffold18 ScafM INDEL 0051.scaffold00187 277625 1 T . scaffold18 ScafM SNP 0051.scaffold00187 277641 1 G A scaffold18 Both SNP 0051.scaffold00187 277669 1 C T scaffold18 Both SNP 0051.scaffold00187 277697 1 C G scaffold18 ReadM SNP 0051.scaffold00187 277754 1 T C - ReadM SNP 0051.scaffold00187 277796 1 T G - ReadM SNP 0051.scaffold00187 277851 1 G A - ReadM SNP 0051.scaffold00187 278012 1 C T - ReadM SNP 0051.scaffold00187 278026 1 T C - ReadM SNP 0051.scaffold00187 280332 1 C T - ReadM SNP 0051.scaffold00187 280339 1 C T - ReadM SNP 0051.scaffold00187 281951 1 C T - ReadM SNP 0051.scaffold00187 282990 1 G A - ReadM SNP 0051.scaffold00187 284085 1 T C - ReadM SNP 0051.scaffold00187 284195 1 T A - ReadM SNP 0051.scaffold00187 285305 1 C T - ReadM SNP 0051.scaffold00187 285369 1 T C - ReadM SNP 0051.scaffold00187 285502 1 T A - ReadM SNP 0051.scaffold00187 285550 1 G C - ReadM SNP 0051.scaffold00187 285647 1 G T - ReadM SNP 0051.scaffold00187 287225 1 A G - ReadM SNP 0051.scaffold00187 287361 1 T C - ReadM SNP 0051.scaffold00187 287508 1 G A - ReadM SNP 0051.scaffold00187 287520 1 G A - ReadM SNP 0051.scaffold00187 287575 1 G A - ReadM SNP 0051.scaffold00187 287713 1 T A - ReadM SNP 0051.scaffold00187 287715 1 A G - ReadM SNP 0051.scaffold00187 287831 1 C A - ReadM SNP 0051.scaffold00187 287915 1 C A - ReadM SNP 0051.scaffold00187 287944 1 T C - ReadM SNP 0051.scaffold00187 288155 1 C T - ReadM SNP 0051.scaffold00187 288184 1 T G - ReadM SNP 0051.scaffold00187 288202 1 A G - ReadM SNP 0051.scaffold00187 288252 1 T A - ReadM SNP 0051.scaffold00187 288392 1 T A - ReadM SNP 0051.scaffold00187 288431 1 C T - ReadM SNP 0051.scaffold00187 288434 1 G A - ReadM SNP 0051.scaffold00187 288448 1 C T - ReadM INDEL 0051.scaffold00187 288528 1 . A - ReadM SNP 0051.scaffold00187 288963 1 T G - ReadM SNP 0051.scaffold00187 288987 1 A C - ReadM SNP 0051.scaffold00187 289002 1 C A - ReadM SNP 0051.scaffold00187 289510 1 T A - ReadM INDEL 0051.scaffold00187 289516 1 . G - ReadM SNP 0051.scaffold00187 289555 1 A C - ReadM SNP 0051.scaffold00187 289609 1 C T - ReadM SNP 0051.scaffold00187 289615 1 G A - ReadM SNP 0051.scaffold00187 289640 1 A G - ReadM SNP 0051.scaffold00187 290132 1 A T - Both SNP 0051.scaffold00187 290749 1 C A scaffold18 Both SNP 0051.scaffold00187 290837 1 G A scaffold18 ScafM SNP 0051.scaffold00187 290873 2 CA TT scaffold18 ScafM SNP 0051.scaffold00187 290920 1 C T scaffold18 Both SNP 0051.scaffold00187 290968 1 G A scaffold18 Both SNP 0051.scaffold00187 290986 1 C A scaffold18 Both SNP 0051.scaffold00187 291017 1 T C scaffold18 Both SNP 0051.scaffold00187 291059 1 T C scaffold18 Both INDEL 0051.scaffold00187 291179 1 . T scaffold18 Both SNP 0051.scaffold00187 291186 1 A G scaffold18 Both SNP 0051.scaffold00187 291237 1 C A scaffold18 Both SNP 0051.scaffold00187 291288 1 G T scaffold18 ScafM SNP 0051.scaffold00187 291315 1 A G scaffold18 ScafM INDEL 0051.scaffold00187 291372 3 ... TTT scaffold18 ScafM SNP 0051.scaffold00187 291379 1 A G scaffold18 ScafM SNP 0051.scaffold00187 291391 1 A G scaffold18 ScafM INDEL 0051.scaffold00187 291426 3 ... TAT scaffold18 Both SNP 0051.scaffold00187 291537 1 G T scaffold18 Both SNP 0051.scaffold00187 291539 1 C T scaffold18 ScafM SNP 0051.scaffold00187 291646 1 T C scaffold18 ScafM SNP 0051.scaffold00187 291675 1 C T scaffold18 ScafM SNP 0051.scaffold00187 291685 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 291695 1 . T scaffold18 ScafM SNP 0051.scaffold00187 291770 1 A T scaffold18 ReadM SNP 0051.scaffold00187 291956 1 T A - ReadM SNP 0051.scaffold00187 291984 1 A G - ReadM SNP 0051.scaffold00187 292043 1 T G - ReadM SNP 0051.scaffold00187 292060 1 C T - ReadM SNP 0051.scaffold00187 292164 1 A C - ReadM SNP 0051.scaffold00187 292215 1 C T - ReadM SNP 0051.scaffold00187 292244 1 T C - ReadM SNP 0051.scaffold00187 292299 1 G A - ReadM SNP 0051.scaffold00187 292302 1 T C - Both SNP 0051.scaffold00187 292609 1 C A scaffold18 Both SNP 0051.scaffold00187 292637 1 T A scaffold18 Both SNP 0051.scaffold00187 292686 1 C A scaffold18 Both SNP 0051.scaffold00187 292699 1 A C scaffold18 Both SNP 0051.scaffold00187 292856 1 G A scaffold18 Both SNP 0051.scaffold00187 292883 1 G A scaffold18 Both SNP 0051.scaffold00187 292899 1 T C scaffold18 ReadM SNP 0051.scaffold00187 292943 1 T C - ReadM SNP 0051.scaffold00187 292998 1 C T - ReadM SNP 0051.scaffold00187 293021 1 C T - ReadM SNP 0051.scaffold00187 293208 1 G T - ReadM SNP 0051.scaffold00187 293246 1 G T - ReadM SNP 0051.scaffold00187 293311 1 G A - ReadM SNP 0051.scaffold00187 293422 1 C T - ReadM SNP 0051.scaffold00187 293471 1 G A - ReadM SNP 0051.scaffold00187 293482 1 A T - ReadM SNP 0051.scaffold00187 293582 1 G T - ReadM SNP 0051.scaffold00187 293621 1 C T - ReadM SNP 0051.scaffold00187 293671 1 T C - ReadM INDEL 0051.scaffold00187 293823 1 A . - ReadM SNP 0051.scaffold00187 293902 1 C T - ReadM SNP 0051.scaffold00187 293936 1 A G - ReadM SNP 0051.scaffold00187 293967 1 T A - ReadM SNP 0051.scaffold00187 294139 1 A C - ReadM SNP 0051.scaffold00187 294409 1 G A - ReadM SNP 0051.scaffold00187 294412 1 A T - ReadM SNP 0051.scaffold00187 294463 1 C T - ReadM SNP 0051.scaffold00187 294537 1 G T - ReadM SNP 0051.scaffold00187 294710 1 C T - ReadM SNP 0051.scaffold00187 294763 1 C T - ReadM SNP 0051.scaffold00187 294766 1 G A - ReadM SNP 0051.scaffold00187 294870 1 C T - ReadM SNP 0051.scaffold00187 294899 1 C T - ReadM SNP 0051.scaffold00187 295281 1 A G - ReadM SNP 0051.scaffold00187 295367 1 G T - ReadM SNP 0051.scaffold00187 295398 1 G T - ReadM SNP 0051.scaffold00187 295437 1 T C - ReadM SNP 0051.scaffold00187 295444 1 T C - ReadM SNP 0051.scaffold00187 295493 1 G A - ReadM SNP 0051.scaffold00187 295509 1 A G - ReadM SNP 0051.scaffold00187 295558 1 C T - ReadM SNP 0051.scaffold00187 295612 1 T A - ReadM SNP 0051.scaffold00187 295736 1 G A - ReadM SNP 0051.scaffold00187 295799 1 A G - ReadM SNP 0051.scaffold00187 295804 1 A G - ReadM SNP 0051.scaffold00187 295894 1 G C - ReadM SNP 0051.scaffold00187 295903 1 A G - ReadM SNP 0051.scaffold00187 295927 1 G C - ReadM SNP 0051.scaffold00187 296084 1 T C - ReadM SNP 0051.scaffold00187 296257 1 A G - ReadM SNP 0051.scaffold00187 299621 1 A C - ReadM SNP 0051.scaffold00187 299727 1 T C - ReadM SNP 0051.scaffold00187 299814 1 T G - ReadM SNP 0051.scaffold00187 299819 1 T G - ReadM SNP 0051.scaffold00187 299886 1 T G - ReadM SNP 0051.scaffold00187 299898 1 C A - ReadM SNP 0051.scaffold00187 300030 1 T A - ReadM SNP 0051.scaffold00187 300100 1 A C - ReadM SNP 0051.scaffold00187 300203 1 T G - ReadM SNP 0051.scaffold00187 300300 1 T C - ReadM SNP 0051.scaffold00187 300328 1 C T - Both SNP 0051.scaffold00187 300547 1 T C scaffold18 Both SNP 0051.scaffold00187 300565 1 A T scaffold18 ReadM SNP 0051.scaffold00187 300588 1 T C - Both SNP 0051.scaffold00187 300711 1 G T scaffold18 Both SNP 0051.scaffold00187 300729 1 G C scaffold18 Both SNP 0051.scaffold00187 300743 1 T A scaffold18 ScafM SNP 0051.scaffold00187 300842 1 C T scaffold18 Both SNP 0051.scaffold00187 300989 1 C A scaffold18 Both SNP 0051.scaffold00187 300996 1 T A scaffold18 ScafM SNP 0051.scaffold00187 301024 1 A C scaffold18 ScafM INDEL 0051.scaffold00187 301077 1 . A scaffold18 ScafM SNP 0051.scaffold00187 301081 1 T G scaffold18 ReadM SNP 0051.scaffold00187 301493 1 G A - ScafM SNP 0051.scaffold00187 301574 1 T C scaffold18 ScafM SNP 0051.scaffold00187 301611 1 G T scaffold18 ScafM INDEL 0051.scaffold00187 301613 10 ACTATTTTAT .......... scaffold18 Both SNP 0051.scaffold00187 301762 1 C T scaffold18 ScafM SNP 0051.scaffold00187 301918 3 CCC TTT scaffold18 Both SNP 0051.scaffold00187 301963 1 A G scaffold18 Both SNP 0051.scaffold00187 302006 1 G A scaffold18 Both SNP 0051.scaffold00187 302079 1 T A scaffold18 Both SNP 0051.scaffold00187 302391 1 G A scaffold18 Both SNP 0051.scaffold00187 302397 1 G A scaffold18 Both INDEL 0051.scaffold00187 302426 1 C . scaffold18 Both SNP 0051.scaffold00187 302488 1 G T scaffold18 Both SNP 0051.scaffold00187 302496 1 A T scaffold18 ScafM INDEL 0051.scaffold00187 302656 1 . T scaffold18 Both SNP 0051.scaffold00187 302723 1 C T scaffold18 Both SNP 0051.scaffold00187 302737 1 C T scaffold18 Both SNP 0051.scaffold00187 302853 1 C T scaffold18 Both SNP 0051.scaffold00187 302965 1 G C scaffold18 Both SNP 0051.scaffold00187 303114 1 G A scaffold18 Both SNP 0051.scaffold00187 303163 1 C T scaffold18 Both SNP 0051.scaffold00187 303200 1 T C scaffold18 Both SNP 0051.scaffold00187 303240 1 T C scaffold18 Both SNP 0051.scaffold00187 303333 1 T C scaffold18 Both SNP 0051.scaffold00187 303358 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 303368 1 T . scaffold18 ScafM SNP 0051.scaffold00187 303385 1 A C scaffold18 ScafM SNP 0051.scaffold00187 303408 1 A T scaffold18 ScafM INDEL 0051.scaffold00187 303431 4 AAGG .... scaffold18 Both SNP 0051.scaffold00187 303618 2 TG CC scaffold18 Both SNP 0051.scaffold00187 303702 1 G A scaffold18 Both SNP 0051.scaffold00187 303816 1 A T scaffold18 Both SNP 0051.scaffold00187 303911 1 A G scaffold18 Both SNP 0051.scaffold00187 304023 1 G A scaffold18 Both SNP 0051.scaffold00187 304030 1 C T scaffold18 Both SNP 0051.scaffold00187 304043 1 A C scaffold18 Both SNP 0051.scaffold00187 304088 1 C T scaffold18 Both SNP 0051.scaffold00187 304167 1 G A scaffold18 Both SNP 0051.scaffold00187 304180 1 A G scaffold18 Both SNP 0051.scaffold00187 304211 1 T C scaffold18 Both SNP 0051.scaffold00187 304376 1 A G scaffold18 Both SNP 0051.scaffold00187 304493 1 T A scaffold18 ReadM SNP 0051.scaffold00187 304595 1 C T - ReadM SNP 0051.scaffold00187 304610 1 C T - Both SNP 0051.scaffold00187 304651 1 A G scaffold18 Both SNP 0051.scaffold00187 304661 1 C T scaffold18 Both SNP 0051.scaffold00187 304669 1 A G scaffold18 Both SNP 0051.scaffold00187 304730 1 C A scaffold18 ScafM SNP 0051.scaffold00187 304785 2 TA AT scaffold18 Both SNP 0051.scaffold00187 305124 1 G A scaffold18 Both SNP 0051.scaffold00187 305210 1 C G scaffold18 Both SNP 0051.scaffold00187 305287 1 C T scaffold18 Both SNP 0051.scaffold00187 305311 1 T C scaffold18 Both SNP 0051.scaffold00187 305354 1 T G scaffold18 Both SNP 0051.scaffold00187 305383 1 A G scaffold18 ReadM SNP 0051.scaffold00187 305488 1 T C - ReadM SNP 0051.scaffold00187 305532 1 C T - ReadM SNP 0051.scaffold00187 305559 1 C T - ReadM SNP 0051.scaffold00187 305578 1 A G - ReadM SNP 0051.scaffold00187 305665 1 C T - ReadM SNP 0051.scaffold00187 305794 1 G A - ReadM SNP 0051.scaffold00187 305808 1 T C - ReadM INDEL 0051.scaffold00187 305825 1 . T - ReadM SNP 0051.scaffold00187 305853 1 A G - ReadM SNP 0051.scaffold00187 305931 1 G T - ReadM SNP 0051.scaffold00187 306054 1 G A - ReadM SNP 0051.scaffold00187 306074 1 T G - ReadM SNP 0051.scaffold00187 306099 1 G T - ReadM SNP 0051.scaffold00187 306122 1 T C - ReadM SNP 0051.scaffold00187 306291 1 G A - ReadM SNP 0051.scaffold00187 306362 1 C G - ReadM SNP 0051.scaffold00187 306395 1 C T - ReadM SNP 0051.scaffold00187 306410 1 C T - ReadM SNP 0051.scaffold00187 306505 1 T C - ReadM SNP 0051.scaffold00187 306559 1 T C - ReadM SNP 0051.scaffold00187 306588 1 G A - ReadM SNP 0051.scaffold00187 306649 1 T C - ReadM SNP 0051.scaffold00187 306752 1 G A - ReadM SNP 0051.scaffold00187 306761 1 T C - ReadM SNP 0051.scaffold00187 306944 1 A G - ReadM SNP 0051.scaffold00187 307000 1 T C - ReadM SNP 0051.scaffold00187 307025 1 G T - ReadM SNP 0051.scaffold00187 307090 1 T C - ReadM SNP 0051.scaffold00187 307166 1 C T - ReadM SNP 0051.scaffold00187 307287 1 T C - ReadM SNP 0051.scaffold00187 307333 1 T A - ReadM SNP 0051.scaffold00187 307403 1 G A - ReadM SNP 0051.scaffold00187 307440 1 A T - ReadM SNP 0051.scaffold00187 307511 2 TG CA - ReadM SNP 0051.scaffold00187 307564 1 A G - ReadM SNP 0051.scaffold00187 307669 1 A C - ReadM SNP 0051.scaffold00187 307689 1 T C - ReadM SNP 0051.scaffold00187 307723 1 G A - ReadM SNP 0051.scaffold00187 307726 1 A G - ReadM SNP 0051.scaffold00187 307796 1 G T - ReadM SNP 0051.scaffold00187 307858 1 G A - ReadM SNP 0051.scaffold00187 307871 1 C G - ReadM SNP 0051.scaffold00187 307966 1 A T - ReadM SNP 0051.scaffold00187 307978 1 G C - ReadM SNP 0051.scaffold00187 308055 1 T A - ReadM SNP 0051.scaffold00187 308077 2 CA TG - ReadM SNP 0051.scaffold00187 308131 1 T G - ReadM SNP 0051.scaffold00187 308261 1 A G - ReadM SNP 0051.scaffold00187 308362 1 G T - ReadM SNP 0051.scaffold00187 308364 1 C T - ReadM SNP 0051.scaffold00187 308393 1 A G - ReadM SNP 0051.scaffold00187 308455 1 C T - ReadM SNP 0051.scaffold00187 308559 1 A G - Both SNP 0051.scaffold00187 308650 1 A T scaffold18 Both SNP 0051.scaffold00187 308728 1 C T scaffold18 ReadM SNP 0051.scaffold00187 308808 1 C T - ReadM SNP 0051.scaffold00187 308834 1 A G - ReadM SNP 0051.scaffold00187 308995 1 G A - ReadM SNP 0051.scaffold00187 309045 1 A G - ReadM SNP 0051.scaffold00187 309109 1 T C - ReadM SNP 0051.scaffold00187 309257 1 G C - ReadM SNP 0051.scaffold00187 309270 1 C T - Both SNP 0051.scaffold00187 309321 1 A G scaffold18 Both SNP 0051.scaffold00187 309350 1 G A scaffold18 Both SNP 0051.scaffold00187 309369 1 T C scaffold18 Both SNP 0051.scaffold00187 309398 1 C T scaffold18 Both SNP 0051.scaffold00187 309400 1 G A scaffold18 Both SNP 0051.scaffold00187 309460 1 C A scaffold18 Both SNP 0051.scaffold00187 309472 1 A G scaffold18 Both SNP 0051.scaffold00187 309528 1 C T scaffold18 Both SNP 0051.scaffold00187 309626 1 G A scaffold18 Both SNP 0051.scaffold00187 309738 1 C T scaffold18 Both SNP 0051.scaffold00187 309752 1 C T scaffold18 ScafM SNP 0051.scaffold00187 309760 1 A C scaffold18 ScafM SNP 0051.scaffold00187 309762 1 A T scaffold18 Both SNP 0051.scaffold00187 309850 1 G T scaffold18 Both SNP 0051.scaffold00187 309865 1 C G scaffold18 Both SNP 0051.scaffold00187 309890 1 G T scaffold18 ScafM SNP 0051.scaffold00187 309968 1 C A scaffold18 ScafM SNP 0051.scaffold00187 310015 2 AG GC scaffold18 ScafM SNP 0051.scaffold00187 310022 1 C T scaffold18 ScafM SNP 0051.scaffold00187 310035 1 C A scaffold18 ScafM SNP 0051.scaffold00187 310042 1 A G scaffold18 Both SNP 0051.scaffold00187 310057 1 T G scaffold18 Both SNP 0051.scaffold00187 310074 1 G A scaffold18 Both SNP 0051.scaffold00187 310261 1 C T scaffold18 Both SNP 0051.scaffold00187 310280 2 TA CG scaffold18 Both SNP 0051.scaffold00187 310458 1 G C scaffold18 Both SNP 0051.scaffold00187 310476 1 T G scaffold18 Both SNP 0051.scaffold00187 310496 1 G A scaffold18 Both SNP 0051.scaffold00187 310508 1 G A scaffold18 Both SNP 0051.scaffold00187 310810 1 C T scaffold18 Both SNP 0051.scaffold00187 310939 1 T A scaffold18 ReadM SNP 0051.scaffold00187 310982 1 T C - ReadM SNP 0051.scaffold00187 311008 1 A T - ReadM SNP 0051.scaffold00187 311087 1 A G - Both SNP 0051.scaffold00187 311289 1 G T scaffold18 Both SNP 0051.scaffold00187 311311 1 A C scaffold18 ScafM INDEL 0051.scaffold00187 311384 3 GGA ... scaffold18 Both INDEL 0051.scaffold00187 311423 1 C . scaffold18 Both SNP 0051.scaffold00187 311528 1 A G scaffold18 Both SNP 0051.scaffold00187 311730 1 G T scaffold18 Both SNP 0051.scaffold00187 311777 1 A G scaffold18 Both SNP 0051.scaffold00187 311863 1 T A scaffold18 Both SNP 0051.scaffold00187 311883 1 G A scaffold18 Both SNP 0051.scaffold00187 312025 1 T C scaffold18 Both SNP 0051.scaffold00187 312055 1 C A scaffold18 ReadM SNP 0051.scaffold00187 312223 1 G A - ReadM SNP 0051.scaffold00187 312320 1 G T - ReadM SNP 0051.scaffold00187 312342 1 T A - ReadM SNP 0051.scaffold00187 312389 1 A C - ReadM INDEL 0051.scaffold00187 312405 1 T . - ReadM INDEL 0051.scaffold00187 312598 1 A . - ReadM SNP 0051.scaffold00187 312658 1 C A - ReadM SNP 0051.scaffold00187 312676 1 T G - ReadM SNP 0051.scaffold00187 312916 1 A G - ReadM SNP 0051.scaffold00187 313148 1 C G - ReadM SNP 0051.scaffold00187 313164 1 C T - ReadM SNP 0051.scaffold00187 313204 1 T C - ReadM SNP 0051.scaffold00187 313212 1 T C - ReadM SNP 0051.scaffold00187 313262 1 A G - ReadM SNP 0051.scaffold00187 313593 1 T C - ReadM INDEL 0051.scaffold00187 313635 1 . A - ReadM SNP 0051.scaffold00187 313738 1 G A - ReadM INDEL 0051.scaffold00187 314092 1 . T - ReadM SNP 0051.scaffold00187 314117 1 A T - ReadM SNP 0051.scaffold00187 314145 1 C T - ReadM SNP 0051.scaffold00187 314175 1 C T - Both INDEL 0051.scaffold00187 314240 1 . A scaffold18 Both SNP 0051.scaffold00187 314256 1 G T scaffold18 Both SNP 0051.scaffold00187 314278 1 A G scaffold18 ScafM SNP 0051.scaffold00187 314287 1 C T scaffold18 ReadM SNP 0051.scaffold00187 314306 1 G A - ReadM SNP 0051.scaffold00187 314377 1 G A - ReadM SNP 0051.scaffold00187 314402 1 C T - ReadM INDEL 0051.scaffold00187 314781 1 . G - ReadM SNP 0051.scaffold00187 314786 1 C G - ReadM INDEL 0051.scaffold00187 314829 1 . A - ReadM SNP 0051.scaffold00187 314965 1 A T - ReadM INDEL 0051.scaffold00187 314974 1 A . - ReadM SNP 0051.scaffold00187 315087 1 A G - ReadM SNP 0051.scaffold00187 315271 2 TT CC - ReadM SNP 0051.scaffold00187 315308 1 G T - ReadM SNP 0051.scaffold00187 315491 1 C G - ReadM INDEL 0051.scaffold00187 315675 1 . T - ReadM SNP 0051.scaffold00187 316052 1 A G - ReadM SNP 0051.scaffold00187 316055 1 T A - ScafM SNP 0051.scaffold00187 316161 1 C G scaffold18 ScafM SNP 0051.scaffold00187 316777 1 A G scaffold18 ScafM SNP 0051.scaffold00187 316782 1 T C scaffold18 ScafM SNP 0051.scaffold00187 316786 1 T A scaffold18 ScafM SNP 0051.scaffold00187 316797 1 A G scaffold18 Both SNP 0051.scaffold00187 316841 1 G A scaffold18 ReadM SNP 0051.scaffold00187 317027 1 T C - Both INDEL 0051.scaffold00187 317074 1 T . scaffold18 Both INDEL 0051.scaffold00187 317120 1 . T scaffold18 Both SNP 0051.scaffold00187 317143 1 A G scaffold18 Both SNP 0051.scaffold00187 317198 1 T C scaffold18 Both SNP 0051.scaffold00187 317208 1 T C scaffold18 ScafM SNP 0051.scaffold00187 317538 1 C T scaffold18 ScafM SNP 0051.scaffold00187 317547 1 G A scaffold18 ScafM SNP 0051.scaffold00187 317555 1 G A scaffold18 ScafM SNP 0051.scaffold00187 317570 1 A C scaffold18 ReadM SNP 0051.scaffold00187 317648 1 G A - ReadM SNP 0051.scaffold00187 317724 1 A G - ReadM SNP 0051.scaffold00187 317742 1 C T - ReadM SNP 0051.scaffold00187 317837 1 C A - ReadM SNP 0051.scaffold00187 317856 1 C T - ReadM SNP 0051.scaffold00187 317921 1 A G - ReadM SNP 0051.scaffold00187 318055 1 G T - ReadM SNP 0051.scaffold00187 318081 1 C T - ReadM SNP 0051.scaffold00187 318119 1 G T - ReadM SNP 0051.scaffold00187 318171 1 C T - ReadM SNP 0051.scaffold00187 318229 1 T C - ReadM SNP 0051.scaffold00187 318251 1 T C - ScafM SNP 0051.scaffold00187 319089 1 G A scaffold11164 ScafM INDEL 0051.scaffold00187 319313 1 . G scaffold10677 ScafM SNP 0051.scaffold00187 319316 1 G C scaffold10677 ScafM SNP 0051.scaffold00187 319426 1 A G scaffold10677 ScafM SNP 0051.scaffold00187 319441 1 A G scaffold10677 ScafM SNP 0051.scaffold00187 319474 1 A C scaffold10677 ScafM SNP 0051.scaffold00187 320101 1 T A scaffold6416 ScafM SNP 0051.scaffold00187 320187 1 T A scaffold6416 ScafM INDEL 0051.scaffold00187 320257 1 A . scaffold6416 ScafM SNP 0051.scaffold00187 320279 1 G A scaffold6416 ScafM SNP 0051.scaffold00187 320296 1 C A scaffold6416 ScafM SNP 0051.scaffold00187 320364 1 G A scaffold6416 ScafM SNP 0051.scaffold00187 320428 1 C T scaffold6416 ScafM SNP 0051.scaffold00187 320460 1 G A scaffold6416 ScafM SNP 0051.scaffold00187 320475 1 A G scaffold6416 ScafM SNP 0051.scaffold00187 320486 1 A C scaffold6416 ScafM SNP 0051.scaffold00187 320501 1 C G scaffold6416 ScafM SNP 0051.scaffold00187 324879 1 A T scaffold18 ScafM SNP 0051.scaffold00187 324930 1 T C scaffold18 ScafM SNP 0051.scaffold00187 324950 1 T A scaffold18 ReadM SNP 0051.scaffold00187 325109 1 T C - ReadM SNP 0051.scaffold00187 325253 1 T C - ReadM SNP 0051.scaffold00187 325271 1 A G - ReadM SNP 0051.scaffold00187 325315 1 A T - ReadM SNP 0051.scaffold00187 325537 1 C G - ReadM SNP 0051.scaffold00187 325561 1 T C - ScafM SNP 0051.scaffold00187 325652 1 C G scaffold18 ReadM SNP 0051.scaffold00187 326018 1 A G - ReadM SNP 0051.scaffold00187 326048 1 C A - ReadM SNP 0051.scaffold00187 326062 1 A G - ReadM SNP 0051.scaffold00187 326234 1 A G - ReadM SNP 0051.scaffold00187 326284 1 A G - ReadM SNP 0051.scaffold00187 326461 1 G T - ReadM SNP 0051.scaffold00187 326572 1 T A - ReadM SNP 0051.scaffold00187 326622 1 G A - ReadM SNP 0051.scaffold00187 326666 1 T C - ReadM SNP 0051.scaffold00187 326670 1 A G - ReadM SNP 0051.scaffold00187 326689 1 G T - ReadM SNP 0051.scaffold00187 326697 1 T C - ReadM SNP 0051.scaffold00187 326800 1 C T - ReadM SNP 0051.scaffold00187 326855 1 G A - ReadM SNP 0051.scaffold00187 326857 1 C T - ReadM SNP 0051.scaffold00187 326888 1 T C - ReadM SNP 0051.scaffold00187 326999 1 T C - ReadM SNP 0051.scaffold00187 327043 1 C T - ReadM SNP 0051.scaffold00187 327050 1 T A - ReadM SNP 0051.scaffold00187 327141 1 T G - ReadM SNP 0051.scaffold00187 327184 1 A G - ReadM SNP 0051.scaffold00187 327217 1 A G - ReadM SNP 0051.scaffold00187 327228 1 G A - ReadM SNP 0051.scaffold00187 327261 1 T G - ReadM SNP 0051.scaffold00187 327300 1 G T - ReadM SNP 0051.scaffold00187 327386 1 G A - ReadM SNP 0051.scaffold00187 327481 1 G T - ReadM INDEL 0051.scaffold00187 327507 1 C . - ReadM SNP 0051.scaffold00187 327568 1 T A - ReadM SNP 0051.scaffold00187 327594 1 G T - ReadM SNP 0051.scaffold00187 327723 1 G A - ReadM SNP 0051.scaffold00187 327756 1 C A - ReadM SNP 0051.scaffold00187 327932 1 A T - ReadM SNP 0051.scaffold00187 327963 1 A G - ReadM SNP 0051.scaffold00187 328082 1 A G - ReadM SNP 0051.scaffold00187 328236 2 AA GC - ReadM SNP 0051.scaffold00187 328407 1 A G - ReadM SNP 0051.scaffold00187 328538 1 T A - ReadM SNP 0051.scaffold00187 328714 1 G A - ReadM SNP 0051.scaffold00187 328802 1 A T - Both SNP 0051.scaffold00187 328852 1 T C scaffold18 Both SNP 0051.scaffold00187 328878 1 G T scaffold18 Both SNP 0051.scaffold00187 328893 1 G A scaffold18 ReadM SNP 0051.scaffold00187 328921 1 G A - ReadM SNP 0051.scaffold00187 328942 1 T C - ReadM SNP 0051.scaffold00187 328975 1 C T - Both SNP 0051.scaffold00187 329054 1 G A scaffold18 Both SNP 0051.scaffold00187 329056 1 G A scaffold18 Both SNP 0051.scaffold00187 329072 1 T A scaffold18 ScafM SNP 0051.scaffold00187 329097 1 C T scaffold18 Both SNP 0051.scaffold00187 329122 1 G C scaffold18 Both SNP 0051.scaffold00187 329134 1 C T scaffold18 ScafM SNP 0051.scaffold00187 329191 1 C T scaffold18 Both SNP 0051.scaffold00187 329223 1 C A scaffold18 ScafM SNP 0051.scaffold00187 329253 1 A C scaffold18 ScafM SNP 0051.scaffold00187 329301 1 G C scaffold18 ScafM SNP 0051.scaffold00187 329303 1 G A scaffold18 Both SNP 0051.scaffold00187 329324 1 G A scaffold18 Both SNP 0051.scaffold00187 329370 1 A G scaffold18 Both SNP 0051.scaffold00187 329381 1 T C scaffold18 ReadM INDEL 0051.scaffold00187 329470 2 .. AA - ScafM SNP 0051.scaffold00187 329473 1 C A scaffold18 ReadM SNP 0051.scaffold00187 329509 1 G A - ScafM SNP 0051.scaffold00187 329728 1 G A scaffold18 ScafM INDEL 0051.scaffold00187 329742 1 . G scaffold18 ScafM SNP 0051.scaffold00187 329747 1 T A scaffold18 ScafM INDEL 0051.scaffold00187 329749 1 . G scaffold18 ScafM SNP 0051.scaffold00187 329780 1 G T scaffold18 ScafM SNP 0051.scaffold00187 329838 1 A T scaffold18 ScafM SNP 0051.scaffold00187 329840 1 C T scaffold18 ScafM SNP 0051.scaffold00187 329843 1 C G scaffold18 Both SNP 0051.scaffold00187 329902 1 A G scaffold18 Both SNP 0051.scaffold00187 329924 1 C T scaffold18 Both SNP 0051.scaffold00187 329940 1 C A scaffold18 ScafM SNP 0051.scaffold00187 329985 1 A G scaffold18 ScafM SNP 0051.scaffold00187 329995 1 T G scaffold18 ScafM SNP 0051.scaffold00187 330003 1 G C scaffold18 Both SNP 0051.scaffold00187 330047 1 T A scaffold18 Both SNP 0051.scaffold00187 330135 1 C T scaffold18 Both SNP 0051.scaffold00187 330160 1 G T scaffold18 ScafM INDEL 0051.scaffold00187 330279 1 . A scaffold18 ScafM SNP 0051.scaffold00187 330282 2 CG GT scaffold18 ReadM SNP 0051.scaffold00187 330321 1 G A - ReadM SNP 0051.scaffold00187 330332 1 T G - ReadM SNP 0051.scaffold00187 330396 1 G A - ReadM SNP 0051.scaffold00187 330437 1 T C - ReadM SNP 0051.scaffold00187 330497 1 A C - ReadM SNP 0051.scaffold00187 330529 1 C G - Both SNP 0051.scaffold00187 330661 1 G A scaffold18 ScafM SNP 0051.scaffold00187 330756 1 T C scaffold18 Both SNP 0051.scaffold00187 330777 1 C A scaffold18 ReadM INDEL 0051.scaffold00187 330819 1 T . - ReadM SNP 0051.scaffold00187 330921 1 G C - ReadM INDEL 0051.scaffold00187 330963 1 . A - ReadM SNP 0051.scaffold00187 330985 1 A G - ReadM SNP 0051.scaffold00187 331008 1 T A - ReadM SNP 0051.scaffold00187 331116 1 C T - ScafM SNP 0051.scaffold00187 333813 1 A T scaffold18 Both SNP 0051.scaffold00187 333841 1 T C scaffold18 ScafM SNP 0051.scaffold00187 333876 1 C A scaffold18 ScafM SNP 0051.scaffold00187 334090 1 A C scaffold18 ScafM SNP 0051.scaffold00187 334260 1 T A scaffold18 ReadM SNP 0051.scaffold00187 334319 1 G T - ReadM SNP 0051.scaffold00187 334556 1 A G - ReadM SNP 0051.scaffold00187 334559 1 G A - ReadM SNP 0051.scaffold00187 334790 1 G T - ReadM SNP 0051.scaffold00187 334803 1 T C - ScafM INDEL 0051.scaffold00187 338169 6 ...... AAAAAA scaffold18 ScafM SNP 0051.scaffold00187 338224 2 TA CG scaffold18 ScafM SNP 0051.scaffold00187 338230 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 338280 4 GGGG .... scaffold18 ScafM INDEL 0051.scaffold00187 338286 1 G . scaffold18 ScafM SNP 0051.scaffold00187 338301 1 C G scaffold18 ReadM SNP 0051.scaffold00187 338594 1 G T - Both SNP 0051.scaffold00187 338677 1 G A scaffold18 Both SNP 0051.scaffold00187 338781 1 C T scaffold18 ScafM SNP 0051.scaffold00187 338981 1 G C scaffold18 ScafM SNP 0051.scaffold00187 338994 1 T A scaffold18 ScafM SNP 0051.scaffold00187 339002 1 G A scaffold18 ScafM SNP 0051.scaffold00187 339282 1 G A scaffold18 ScafM INDEL 0051.scaffold00187 339293 1 A . scaffold18 ScafM INDEL 0051.scaffold00187 339321 1 . T scaffold18 ScafM SNP 0051.scaffold00187 339323 1 G T scaffold18 ScafM SNP 0051.scaffold00187 339624 1 C A scaffold18 ScafM SNP 0051.scaffold00187 339633 1 T A scaffold18 ScafM SNP 0051.scaffold00187 339635 1 T A scaffold18 ScafM SNP 0051.scaffold00187 339638 1 T G scaffold18 ScafM SNP 0051.scaffold00187 339695 1 A C scaffold18 Both SNP 0051.scaffold00187 339747 1 T C scaffold18 ScafM SNP 0051.scaffold00187 339863 1 C G scaffold18 ScafM SNP 0051.scaffold00187 339866 1 G A scaffold18 ScafM SNP 0051.scaffold00187 340000 1 G A scaffold18 ScafM SNP 0051.scaffold00187 340005 1 A G scaffold18 ScafM SNP 0051.scaffold00187 340037 1 C A scaffold18 ScafM SNP 0051.scaffold00187 340046 1 G A scaffold18 ScafM SNP 0051.scaffold00187 340053 1 G A scaffold18 ScafM SNP 0051.scaffold00187 340057 1 G T scaffold18 ScafM SNP 0051.scaffold00187 340101 1 A G scaffold18 ScafM SNP 0051.scaffold00187 340113 1 C A scaffold18 ScafM INDEL 0051.scaffold00187 340659 5 ..... TCCCC scaffold18 ScafM SNP 0051.scaffold00187 340660 1 G C scaffold18 ScafM SNP 0051.scaffold00187 340697 1 C T scaffold18 Both INDEL 0051.scaffold00187 340776 1 . A scaffold18 ScafM SNP 0051.scaffold00187 340806 1 C T scaffold18 ScafM SNP 0051.scaffold00187 340992 1 T A scaffold18 ReadM SNP 0051.scaffold00187 341140 1 A T - ReadM SNP 0051.scaffold00187 341558 1 G A - Both SNP 0051.scaffold00187 341727 1 A T scaffold18 ReadM SNP 0051.scaffold00187 341756 1 G T - Both SNP 0051.scaffold00187 341940 1 T G scaffold18 ScafM SNP 0051.scaffold00187 342263 1 T A scaffold18 ScafM SNP 0051.scaffold00187 342366 1 G A scaffold18 ReadM SNP 0051.scaffold00187 342744 1 A G - Both SNP 0051.scaffold00187 343202 1 T C scaffold18 Both SNP 0051.scaffold00187 343226 1 G T scaffold18 Both SNP 0051.scaffold00187 343247 1 G T scaffold18 Both SNP 0051.scaffold00187 343277 1 C A scaffold18 Both SNP 0051.scaffold00187 343313 1 A G scaffold18 Both SNP 0051.scaffold00187 343420 1 T C scaffold18 Both SNP 0051.scaffold00187 343444 1 T C scaffold18 Both SNP 0051.scaffold00187 343450 1 C A scaffold18 Both SNP 0051.scaffold00187 343464 1 T C scaffold18 ScafM SNP 0051.scaffold00187 343574 1 T C scaffold18 ReadM SNP 0051.scaffold00187 343689 1 C T - ReadM SNP 0051.scaffold00187 343704 1 A G - ReadM SNP 0051.scaffold00187 343864 1 G T - ReadM INDEL 0051.scaffold00187 344010 1 A . - ReadM SNP 0051.scaffold00187 344094 1 T C - ReadM SNP 0051.scaffold00187 344143 1 C T - ReadM SNP 0051.scaffold00187 344294 1 T A - ReadM SNP 0051.scaffold00187 344303 1 G A - ReadM SNP 0051.scaffold00187 344309 1 T C - ReadM SNP 0051.scaffold00187 345545 1 G T - ReadM SNP 0051.scaffold00187 345548 1 G A - ReadM SNP 0051.scaffold00187 345573 1 G A - ReadM INDEL 0051.scaffold00187 345872 2 AT .. - ReadM SNP 0051.scaffold00187 345983 1 C T - ScafM SNP 0051.scaffold00187 346043 1 C T scaffold18 ScafM INDEL 0051.scaffold00187 346078 1 . A scaffold18 ScafM SNP 0051.scaffold00187 346100 1 G A scaffold18 ScafM SNP 0051.scaffold00187 346219 1 C T scaffold18 ScafM SNP 0051.scaffold00187 346236 1 A C scaffold18 ScafM SNP 0051.scaffold00187 346240 1 T G scaffold18 ScafM SNP 0051.scaffold00187 346266 1 A T scaffold18 ScafM INDEL 0051.scaffold00187 346492 3 GTT ... scaffold18 ScafM INDEL 0051.scaffold00187 346497 3 TGT ... scaffold18 ScafM SNP 0051.scaffold00187 346568 1 C T scaffold18 ScafM SNP 0051.scaffold00187 346620 1 A G scaffold18 ScafM SNP 0051.scaffold00187 346636 1 C T scaffold18 ReadM SNP 0051.scaffold00187 347654 1 A G - ReadM SNP 0051.scaffold00187 347879 1 T A - ReadM SNP 0051.scaffold00187 349415 1 G C - Both SNP 0051.scaffold00187 349657 1 T A scaffold10408 ReadM SNP 0051.scaffold00187 350016 1 T C - ReadM SNP 0051.scaffold00187 350075 1 A C - Both SNP 0051.scaffold00187 350169 1 A G scaffold10408 Both SNP 0051.scaffold00187 350184 1 C T scaffold10408 ReadM SNP 0051.scaffold00187 350241 1 T C - ReadM SNP 0051.scaffold00187 350374 1 A G - Both SNP 0051.scaffold00187 350403 1 G A scaffold10408 Both SNP 0051.scaffold00187 350460 1 G A scaffold10408 Both INDEL 0051.scaffold00187 350463 1 G . scaffold10408 ReadM SNP 0051.scaffold00187 350577 2 AT GG - ReadM SNP 0051.scaffold00187 350659 1 C G - ReadM SNP 0051.scaffold00187 350674 1 T G - ReadM SNP 0051.scaffold00187 350730 1 G A - ScafM SNP 0051.scaffold00187 350812 1 A C scaffold10408 ScafM SNP 0051.scaffold00187 350833 1 C A scaffold10408 Both SNP 0051.scaffold00187 350921 1 T A scaffold10408 Both INDEL 0051.scaffold00187 350969 1 A . scaffold10408 ReadM SNP 0051.scaffold00187 351020 1 G T - ReadM SNP 0051.scaffold00187 351096 1 A G - ReadM INDEL 0051.scaffold00187 351101 1 T . - ReadM SNP 0051.scaffold00187 351144 1 G A - ReadM SNP 0051.scaffold00187 351193 1 A G - ReadM SNP 0051.scaffold00187 351229 1 G A - Both SNP 0051.scaffold00187 351284 1 A C scaffold10408 Both SNP 0051.scaffold00187 351336 1 A G scaffold10408 Both SNP 0051.scaffold00187 351440 1 G A scaffold10408 Both SNP 0051.scaffold00187 351542 1 G C scaffold10408 Both SNP 0051.scaffold00187 351568 1 T C scaffold10408 Both SNP 0051.scaffold00187 351573 1 C A scaffold10408 Both SNP 0051.scaffold00187 351653 1 C A scaffold10408 ScafM SNP 0051.scaffold00187 351808 2 CA AG scaffold10408 Both SNP 0051.scaffold00187 351887 1 G C scaffold10408 Both SNP 0051.scaffold00187 351905 1 T C scaffold10408 Both SNP 0051.scaffold00187 351929 1 C T scaffold10408 Both SNP 0051.scaffold00187 352006 1 G A scaffold10408 Both SNP 0051.scaffold00187 352027 1 G A scaffold10408 Both SNP 0051.scaffold00187 352068 1 T C scaffold10408 ScafM SNP 0051.scaffold00187 352086 1 T A scaffold10408 ScafM SNP 0051.scaffold00187 352089 1 A T scaffold10408 ScafM SNP 0051.scaffold00187 352097 1 G C scaffold10408 ReadM SNP 0051.scaffold00187 352235 1 A C - ReadM SNP 0051.scaffold00187 352267 1 T C - ReadM SNP 0051.scaffold00187 352540 1 A T - ReadM SNP 0051.scaffold00187 352559 1 A G - ReadM SNP 0051.scaffold00187 352627 1 T G - ReadM SNP 0051.scaffold00187 352639 1 A C - ReadM SNP 0051.scaffold00187 352773 1 G A - ReadM SNP 0051.scaffold00187 352785 1 T G - ReadM SNP 0051.scaffold00187 352903 1 T C - ReadM INDEL 0051.scaffold00187 353073 1 . A - ReadM SNP 0051.scaffold00187 353097 1 A G - ReadM SNP 0051.scaffold00187 353103 1 C T - ReadM SNP 0051.scaffold00187 353243 1 T A - ScafM SNP 0051.scaffold00187 353454 1 T C scaffold10408 ScafM SNP 0051.scaffold00187 354221 1 G C scaffold10408 ScafM SNP 0051.scaffold00187 354266 1 T C scaffold10408 Both SNP 0051.scaffold00187 354379 1 A T scaffold10408 ScafM SNP 0051.scaffold00187 354399 2 TT CA scaffold10408 ScafM SNP 0051.scaffold00187 354602 1 C A scaffold10408 ScafM SNP 0051.scaffold00187 354605 1 T C scaffold10408 ScafM SNP 0051.scaffold00187 354632 1 A T scaffold10408 Both SNP 0051.scaffold00187 354648 1 C A scaffold10408 Both SNP 0051.scaffold00187 354696 1 G T scaffold10408 Both SNP 0051.scaffold00187 354835 1 C T scaffold10408 Both SNP 0051.scaffold00187 354869 1 C T scaffold10408 Both SNP 0051.scaffold00187 354907 1 T G scaffold10408 Both SNP 0051.scaffold00187 354950 1 T G scaffold10408 Both SNP 0051.scaffold00187 354975 1 C A scaffold10408 Both SNP 0051.scaffold00187 355014 1 C T scaffold10408 Both SNP 0051.scaffold00187 355018 1 T C scaffold10408 Both INDEL 0051.scaffold00187 355058 1 . T scaffold10408 Both SNP 0051.scaffold00187 355104 1 A G scaffold10408 Both SNP 0051.scaffold00187 355111 1 C T scaffold10408 Both SNP 0051.scaffold00187 355196 1 G A scaffold10408 Both SNP 0051.scaffold00187 355279 1 G A scaffold10408 Both SNP 0051.scaffold00187 355412 1 G A scaffold10408 Both SNP 0051.scaffold00187 355468 1 A C scaffold10408 ScafM INDEL 0051.scaffold00187 355596 4 GCAT .... scaffold10408 Both SNP 0051.scaffold00187 355630 1 A G scaffold10408 Both SNP 0051.scaffold00187 355658 1 T C scaffold10408 Both SNP 0051.scaffold00187 355700 1 C T scaffold10408 Both SNP 0051.scaffold00187 355787 1 T C scaffold10408 Both SNP 0051.scaffold00187 355942 1 T C scaffold10408 ReadM SNP 0051.scaffold00187 356087 1 C A - ReadM SNP 0051.scaffold00187 356135 1 T G - ReadM SNP 0051.scaffold00187 356409 1 T C - ReadM SNP 0051.scaffold00187 356481 1 C T - ReadM SNP 0051.scaffold00187 356483 1 C T - ReadM SNP 0051.scaffold00187 356594 1 G A - ReadM INDEL 0051.scaffold00187 357009 2 .. AG - ReadM SNP 0051.scaffold00187 357222 1 T C - ReadM SNP 0051.scaffold00187 357241 1 G A - Both SNP 0051.scaffold00187 357260 1 A C scaffold10408 ReadM SNP 0051.scaffold00187 357471 1 C T - ReadM SNP 0051.scaffold00187 357664 1 T C - ReadM SNP 0051.scaffold00187 357687 1 G A - ReadM SNP 0051.scaffold00187 357707 1 A G - ReadM SNP 0051.scaffold00187 357747 1 T G - ReadM SNP 0051.scaffold00187 357975 1 C T - ReadM SNP 0051.scaffold00187 357994 1 G T - ReadM SNP 0051.scaffold00187 358284 1 C A - Both SNP 0051.scaffold00187 358468 1 C A scaffold10408 Both SNP 0051.scaffold00187 358614 1 G C scaffold10408 ReadM SNP 0051.scaffold00187 358648 1 G T - ReadM SNP 0051.scaffold00187 358715 1 A G - Both SNP 0051.scaffold00187 358826 1 G A scaffold10408 Both SNP 0051.scaffold00187 358895 1 T C scaffold10408 Both SNP 0051.scaffold00187 358972 1 T C scaffold10408 ScafM INDEL 0051.scaffold00187 359100 1 . T scaffold10408 ScafM INDEL 0051.scaffold00187 359101 1 . C scaffold10408 ScafM SNP 0051.scaffold00187 359106 1 T C scaffold10408 ScafM INDEL 0051.scaffold00187 359149 1 . G scaffold10408 ScafM SNP 0051.scaffold00187 359151 1 A G scaffold10408 ReadM SNP 0051.scaffold00187 359276 1 C T - ReadM SNP 0051.scaffold00187 359288 1 T C - ReadM SNP 0051.scaffold00187 359291 1 G A - ReadM SNP 0051.scaffold00187 359389 1 A G - ReadM INDEL 0051.scaffold00187 359450 1 A . - ReadM SNP 0051.scaffold00187 359529 1 C T - ReadM SNP 0051.scaffold00187 359603 1 G C - ReadM SNP 0051.scaffold00187 359619 1 T C - ReadM SNP 0051.scaffold00187 359732 1 T C - ReadM SNP 0051.scaffold00187 359752 1 G C - ReadM SNP 0051.scaffold00187 359927 1 T A - ReadM INDEL 0051.scaffold00187 359981 1 C . - ReadM SNP 0051.scaffold00187 359997 1 C T - ReadM SNP 0051.scaffold00187 360174 1 A G - ReadM SNP 0051.scaffold00187 360274 1 A T - ReadM SNP 0051.scaffold00187 360294 1 G T - ReadM SNP 0051.scaffold00187 360340 1 A G - ReadM SNP 0051.scaffold00187 360369 1 A C - ReadM SNP 0051.scaffold00187 360444 1 C T - ReadM SNP 0051.scaffold00187 360451 1 G A - ReadM SNP 0051.scaffold00187 360487 1 T G - ReadM SNP 0051.scaffold00187 360508 1 G T - ReadM SNP 0051.scaffold00187 360526 1 C T - Both SNP 0051.scaffold00187 360584 1 A T scaffold10408 ReadM SNP 0051.scaffold00187 360893 1 A G - ReadM SNP 0051.scaffold00187 360944 1 G T - ReadM SNP 0051.scaffold00187 361227 1 A G - ReadM SNP 0051.scaffold00187 361376 1 A G - ReadM SNP 0051.scaffold00187 361444 1 A G - Both SNP 0051.scaffold00187 361506 1 A G scaffold10408 Both SNP 0051.scaffold00187 361514 1 T A scaffold10408 ReadM INDEL 0051.scaffold00187 361598 1 . T - ReadM SNP 0051.scaffold00187 361625 1 G A - ReadM SNP 0051.scaffold00187 361692 1 T C - ReadM SNP 0051.scaffold00187 361751 1 G A - ReadM SNP 0051.scaffold00187 361904 1 C G - ReadM SNP 0051.scaffold00187 361906 1 A G - ReadM SNP 0051.scaffold00187 361999 1 G A - ReadM SNP 0051.scaffold00187 362009 1 G A - ReadM SNP 0051.scaffold00187 362044 1 T G - ReadM SNP 0051.scaffold00187 362102 1 G A - ReadM SNP 0051.scaffold00187 362209 1 G A - ReadM SNP 0051.scaffold00187 362279 1 T C - ReadM SNP 0051.scaffold00187 362449 1 A C - ReadM SNP 0051.scaffold00187 362569 1 A G - ReadM SNP 0051.scaffold00187 362691 1 C T - ReadM SNP 0051.scaffold00187 362699 1 T C - ReadM SNP 0051.scaffold00187 362706 1 G A - ReadM SNP 0051.scaffold00187 362867 1 T C - ReadM SNP 0051.scaffold00187 362943 1 C T - ReadM SNP 0051.scaffold00187 362956 1 C A - ReadM SNP 0051.scaffold00187 363149 1 C A - ReadM SNP 0051.scaffold00187 363152 1 C T - ReadM SNP 0051.scaffold00187 363212 1 T G - ReadM SNP 0051.scaffold00187 363260 1 A G - ReadM INDEL 0051.scaffold00187 363296 1 . C - ReadM SNP 0051.scaffold00187 363459 1 C T - ReadM SNP 0051.scaffold00187 363675 1 A C - ReadM SNP 0051.scaffold00187 363687 1 T C - ReadM SNP 0051.scaffold00187 363715 1 A G - ReadM SNP 0051.scaffold00187 363738 1 C G - ReadM SNP 0051.scaffold00187 363751 1 C T - ReadM SNP 0051.scaffold00187 363856 1 T C - ReadM SNP 0051.scaffold00187 364006 1 C T - ReadM INDEL 0051.scaffold00187 364021 1 . G - ReadM SNP 0051.scaffold00187 364066 1 A C - ReadM SNP 0051.scaffold00187 364091 1 G A - ReadM SNP 0051.scaffold00187 364133 1 T C - ReadM SNP 0051.scaffold00187 364157 1 C T - ReadM SNP 0051.scaffold00187 364211 1 A G - ReadM SNP 0051.scaffold00187 364272 1 T G - ReadM SNP 0051.scaffold00187 364302 1 T C - ReadM SNP 0051.scaffold00187 364323 1 G A - ReadM SNP 0051.scaffold00187 364449 1 A G - ReadM SNP 0051.scaffold00187 364472 1 A G - ReadM SNP 0051.scaffold00187 364562 2 AC GT - ReadM SNP 0051.scaffold00187 364633 1 T A - ReadM SNP 0051.scaffold00187 364737 1 C T - ReadM SNP 0051.scaffold00187 364847 1 C T - ReadM SNP 0051.scaffold00187 364871 1 C A - ReadM SNP 0051.scaffold00187 364906 1 T C - ReadM SNP 0051.scaffold00187 365020 1 A G - ReadM SNP 0051.scaffold00187 365034 1 G A - ReadM SNP 0051.scaffold00187 365060 1 G C - ReadM SNP 0051.scaffold00187 365122 1 T C - ReadM SNP 0051.scaffold00187 365150 1 A G - Both SNP 0051.scaffold00187 365455 1 T A scaffold10408 Both SNP 0051.scaffold00187 365482 1 T C scaffold10408 Both SNP 0051.scaffold00187 365517 1 A C scaffold10408 ReadM SNP 0051.scaffold00187 365633 1 T C - ReadM SNP 0051.scaffold00187 365706 1 C A - ReadM SNP 0051.scaffold00187 365743 1 C A - ReadM SNP 0051.scaffold00187 365799 1 A C - ReadM SNP 0051.scaffold00187 365853 1 T C - ReadM INDEL 0051.scaffold00187 365891 1 T . - ReadM SNP 0051.scaffold00187 366120 1 G A - ReadM SNP 0051.scaffold00187 366181 1 A G - ReadM SNP 0051.scaffold00187 366230 1 A C - ReadM SNP 0051.scaffold00187 366247 1 G T - ReadM SNP 0051.scaffold00187 366291 1 G A - ReadM SNP 0051.scaffold00187 366303 1 C T - ReadM SNP 0051.scaffold00187 366357 1 T G - ReadM SNP 0051.scaffold00187 366469 1 G A - ReadM SNP 0051.scaffold00187 366505 1 A G - ReadM SNP 0051.scaffold00187 366536 1 C A - ReadM SNP 0051.scaffold00187 366576 1 A G - ReadM SNP 0051.scaffold00187 366643 1 C A - Both SNP 0051.scaffold00187 366783 1 G A scaffold10408 Both SNP 0051.scaffold00187 366883 1 A T scaffold10408 Both SNP 0051.scaffold00187 366890 1 A G scaffold10408 Both SNP 0051.scaffold00187 366919 1 A G scaffold10408 ScafM INDEL 0051.scaffold00187 366971 3 ... AAA scaffold10408 ScafM SNP 0051.scaffold00187 366972 1 C A scaffold10408 ScafM SNP 0051.scaffold00187 366985 1 T A scaffold10408 Both SNP 0051.scaffold00187 367076 1 C G scaffold10408 Both SNP 0051.scaffold00187 367103 1 T C scaffold10408 Both SNP 0051.scaffold00187 367209 1 C T scaffold10408 ScafM SNP 0051.scaffold00187 367361 2 GC AT scaffold10408 Both SNP 0051.scaffold00187 367404 1 G A scaffold10408 ScafM SNP 0051.scaffold00187 367455 2 AT TG scaffold10408 Both SNP 0051.scaffold00187 367547 1 T C scaffold10408 Both SNP 0051.scaffold00187 367791 1 C A scaffold10408 Both SNP 0051.scaffold00187 367950 1 G A scaffold10408 Both SNP 0051.scaffold00187 367967 1 A G scaffold10408 Both SNP 0051.scaffold00187 367994 1 G A scaffold10408 ScafM SNP 0051.scaffold00187 368140 1 G A scaffold10408 ScafM SNP 0051.scaffold00187 368304 1 T G scaffold10408 ScafM INDEL 0051.scaffold00187 368308 1 G . scaffold10408 ReadM SNP 0051.scaffold00187 368399 1 G A - ReadM SNP 0051.scaffold00187 368420 1 T C - ReadM SNP 0051.scaffold00187 368452 1 T A - ScafM SNP 0051.scaffold00187 368691 1 A G scaffold10408 ScafM INDEL 0051.scaffold00187 368713 7 TGTACTT ....... scaffold10408 Both SNP 0051.scaffold00187 368903 1 T A scaffold10408 ScafM INDEL 0051.scaffold00187 370760 1 A . scaffold10408 ScafM SNP 0051.scaffold00187 371756 1 C T scaffold10408 ScafM SNP 0051.scaffold00187 371896 1 T A scaffold10408 ReadM SNP 0051.scaffold00187 372003 1 C T - ReadM SNP 0051.scaffold00187 372170 1 A T - ReadM SNP 0051.scaffold00187 373045 1 G A - ReadM SNP 0051.scaffold00187 373130 1 G T - ReadM SNP 0051.scaffold00187 373196 1 G A - ReadM SNP 0051.scaffold00187 374267 1 T C - ReadM SNP 0051.scaffold00187 374433 1 A G - ReadM SNP 0051.scaffold00187 374462 1 A T - ReadM SNP 0051.scaffold00187 374497 1 A G - ReadM SNP 0051.scaffold00187 374503 1 T C - ReadM SNP 0051.scaffold00187 374541 1 G A - ReadM SNP 0051.scaffold00187 374763 1 A T - ReadM SNP 0051.scaffold00187 374798 1 T G - ReadM SNP 0051.scaffold00187 374824 1 G A - ReadM SNP 0051.scaffold00187 374835 1 A G - ReadM SNP 0051.scaffold00187 374949 1 C T - ReadM SNP 0051.scaffold00187 374973 1 G A - ReadM SNP 0051.scaffold00187 375066 1 C G - ReadM INDEL 0051.scaffold00187 375074 2 .. TA - ReadM SNP 0051.scaffold00187 375191 1 A C - ScafM SNP 0051.scaffold00187 375229 1 A G scaffold7485 ReadM SNP 0051.scaffold00187 375537 1 T C - ReadM SNP 0051.scaffold00187 375641 1 C T - ReadM SNP 0051.scaffold00187 375904 1 A G - ReadM INDEL 0051.scaffold00187 375973 1 T . - ReadM SNP 0051.scaffold00187 376050 1 A G - ReadM SNP 0051.scaffold00187 376238 1 T C - ReadM SNP 0051.scaffold00187 376293 1 T C - ReadM SNP 0051.scaffold00187 376313 1 A C - ReadM SNP 0051.scaffold00187 376398 1 C G - ReadM SNP 0051.scaffold00187 377495 1 A T - ScafM SNP 0051.scaffold00187 378027 1 T A scaffold2964 Both SNP 0051.scaffold00187 379012 1 C T scaffold7485 Both SNP 0051.scaffold00187 379072 1 T G scaffold7485 Both INDEL 0051.scaffold00187 379089 1 A . scaffold7485 Both SNP 0051.scaffold00187 379124 1 A G scaffold7485 Both SNP 0051.scaffold00187 379134 1 C T scaffold7485 Both INDEL 0051.scaffold00187 379183 1 . T scaffold7485 ScafM INDEL 0051.scaffold00187 379281 1 T . scaffold7485 ScafM SNP 0051.scaffold00187 379283 1 T A scaffold7485 ScafM INDEL 0051.scaffold00187 379296 1 . T scaffold7485 ScafM SNP 0051.scaffold00187 379304 1 G T scaffold7485 ScafM INDEL 0051.scaffold00187 379366 36 AGTTTATTTTTCGATCTTAATACTGATTTTACATCA .................................... scaffold7485 ScafM SNP 0051.scaffold00187 379568 1 G A scaffold7485 ScafM SNP 0051.scaffold00187 379595 1 T C scaffold7485 ScafM INDEL 0051.scaffold00187 379617 2 .. TT scaffold7485 ScafM INDEL 0051.scaffold00187 379644 14 TGTTTGTGATTTCA .............. scaffold7485 Both SNP 0051.scaffold00187 379749 1 T C scaffold7485 ScafM SNP 0051.scaffold00187 379763 1 T A scaffold7485 ScafM SNP 0051.scaffold00187 379765 1 A G scaffold7485 Both SNP 0051.scaffold00187 379807 1 T A scaffold7485 Both SNP 0051.scaffold00187 379859 1 A T scaffold7485 ReadM SNP 0051.scaffold00187 379914 1 T A - ReadM SNP 0051.scaffold00187 380043 1 G A - ReadM SNP 0051.scaffold00187 380159 1 C T - ReadM SNP 0051.scaffold00187 380218 1 G C - ReadM SNP 0051.scaffold00187 380227 1 A C - ReadM SNP 0051.scaffold00187 380363 1 T A - ReadM SNP 0051.scaffold00187 380399 1 A G - ReadM SNP 0051.scaffold00187 381208 1 A G - ReadM SNP 0051.scaffold00187 381238 1 A T - ReadM SNP 0051.scaffold00187 381404 1 A C - ReadM SNP 0051.scaffold00187 381471 1 C T - ReadM SNP 0051.scaffold00187 381499 1 T C - ReadM INDEL 0051.scaffold00187 381732 1 A . - ReadM SNP 0051.scaffold00187 381841 1 C T - ReadM SNP 0051.scaffold00187 381934 1 G C - ReadM SNP 0051.scaffold00187 381965 1 C G - ReadM SNP 0051.scaffold00187 381997 1 T C - ReadM SNP 0051.scaffold00187 382214 1 A G - ReadM SNP 0051.scaffold00187 382275 1 G A - ReadM SNP 0051.scaffold00187 382362 1 C T - ReadM SNP 0051.scaffold00187 382467 1 T G - ReadM SNP 0051.scaffold00187 382541 1 C G - ReadM SNP 0051.scaffold00187 382651 1 G A - ReadM SNP 0051.scaffold00187 382715 1 T C - ReadM SNP 0051.scaffold00187 382881 1 C T - ReadM SNP 0051.scaffold00187 383027 1 A C - ReadM SNP 0051.scaffold00187 383101 1 C A - ReadM SNP 0051.scaffold00187 383104 1 G A - ReadM SNP 0051.scaffold00187 383145 1 C G - ReadM SNP 0051.scaffold00187 383312 1 C T - ReadM SNP 0051.scaffold00187 383326 1 A G - ReadM SNP 0051.scaffold00187 383420 1 G T - ScafM SNP 0051.scaffold00187 385112 1 G A scaffold1630 ScafM SNP 0051.scaffold00187 385129 1 T C scaffold1630 ScafM SNP 0051.scaffold00187 385251 1 C A scaffold1630 ScafM SNP 0051.scaffold00187 385284 1 C T scaffold1630 ScafM INDEL 0051.scaffold00187 385310 1 A . scaffold1630 ScafM SNP 0051.scaffold00187 385320 1 A G scaffold1630 ScafM SNP 0051.scaffold00187 385323 1 A C scaffold1630 ScafM SNP 0051.scaffold00187 385386 1 T C scaffold1630 ScafM SNP 0051.scaffold00187 385435 1 T A scaffold1630 ScafM SNP 0051.scaffold00187 385446 1 T A scaffold1630 ScafM SNP 0051.scaffold00187 385462 1 C A scaffold1630 ScafM SNP 0051.scaffold00187 385473 1 A G scaffold1630 ScafM SNP 0051.scaffold00187 385475 1 T C scaffold1630 ScafM SNP 0051.scaffold00187 385485 1 A G scaffold1630 ScafM SNP 0051.scaffold00187 385567 1 T C scaffold1630 ScafM SNP 0051.scaffold00187 385576 1 C T scaffold1630 ScafM SNP 0051.scaffold00187 385609 1 C T scaffold1630 ScafM SNP 0051.scaffold00187 385662 2 TG CA scaffold1630 ScafM INDEL 0051.scaffold00187 385782 2 .. AA scaffold1630 ScafM INDEL 0051.scaffold00187 385810 1 . G scaffold1630 ScafM INDEL 0051.scaffold00187 385811 1 . T scaffold1630 ScafM INDEL 0051.scaffold00187 385840 3 TGA ... scaffold1630 ScafM INDEL 0051.scaffold00187 385847 7 ATAAGGC ....... scaffold1630 ScafM INDEL 0051.scaffold00187 385856 7 TCGTTCT ......A scaffold1630 ScafM INDEL 0051.scaffold00187 385865 1 T . scaffold1630 ScafM INDEL 0051.scaffold00187 385868 1 G . scaffold1630 ScafM SNP 0051.scaffold00187 385875 2 GG TA scaffold1630 ScafM SNP 0051.scaffold00187 385900 1 C T scaffold1630 ScafM SNP 0051.scaffold00187 385931 1 T A scaffold1630 ScafM SNP 0051.scaffold00187 385944 2 CA TT scaffold1630 ScafM SNP 0051.scaffold00187 385952 1 A G scaffold1630 ScafM SNP 0051.scaffold00187 385973 1 G A scaffold1630 ScafM SNP 0051.scaffold00187 415614 1 A G scaffold5247 ScafM INDEL 0051.scaffold00187 422216 3 TAT ... scaffold8956 ScafM SNP 0051.scaffold00187 422220 1 A G scaffold8956 ScafM SNP 0051.scaffold00187 422246 1 A C scaffold8956 ScafM SNP 0051.scaffold00187 422252 1 A C scaffold8956 ScafM SNP 0051.scaffold00187 422317 1 C T scaffold8956 ScafM SNP 0051.scaffold00187 422326 1 G A scaffold8956 ScafM SNP 0051.scaffold00187 422331 1 C T scaffold8956 ScafM SNP 0051.scaffold00187 422338 1 T A scaffold8956 ScafM SNP 0051.scaffold00187 422354 1 A G scaffold8956 ScafM SNP 0051.scaffold00187 422383 1 C T scaffold8956 ScafM SNP 0051.scaffold00187 436509 1 T C scaffold10673 ScafM SNP 0051.scaffold00187 436512 1 T A scaffold10673 ScafM SNP 0051.scaffold00187 436519 1 T C scaffold10673 ScafM SNP 0051.scaffold00187 436521 1 A C scaffold10673 ScafM INDEL 0051.scaffold00187 436554 1 C . scaffold10673 ScafM SNP 0051.scaffold00187 436567 1 T C scaffold10673 ScafM SNP 0051.scaffold00187 436571 1 C T scaffold10673 ScafM SNP 0051.scaffold00187 436580 1 A T scaffold10673 ScafM SNP 0051.scaffold00187 436906 2 GA AC scaffold3562 ScafM SNP 0051.scaffold00187 436926 1 A G scaffold3562 ScafM SNP 0051.scaffold00187 436931 1 T A scaffold3562 ScafM SNP 0051.scaffold00187 436947 1 C T scaffold3562 ScafM SNP 0051.scaffold00187 436955 1 T A scaffold3562 ScafM SNP 0051.scaffold00187 436982 1 T A scaffold3562 ScafM SNP 0051.scaffold00187 436985 1 G T scaffold3562 ScafM SNP 0051.scaffold00187 437000 3 GGT ATG scaffold3562 ScafM INDEL 0051.scaffold00187 437012 6 ...... TATATA scaffold3562 ScafM SNP 0051.scaffold00187 437014 2 GC AT scaffold3562 ScafM INDEL 0051.scaffold00187 437049 8 TCTCACAT ........ scaffold3562 ScafM SNP 0051.scaffold00187 437069 1 A C scaffold3562 ScafM SNP 0051.scaffold00187 437072 1 A T scaffold3562 ScafM SNP 0051.scaffold00187 437081 1 G T scaffold3562 ScafM SNP 0051.scaffold00187 437091 1 T C scaffold3562 ScafM SNP 0051.scaffold00187 437097 1 A G scaffold3562 ScafM SNP 0051.scaffold00187 437105 1 C T scaffold3562 ScafM SNP 0051.scaffold00187 437114 1 C T scaffold3562 ScafM SNP 0051.scaffold00187 437120 2 TG CA scaffold3562 ScafM SNP 0051.scaffold00187 439144 1 A G scaffold6987 ScafM SNP 0051.scaffold00187 439150 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439153 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439159 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439162 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439165 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439172 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439177 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439182 2 CT TC scaffold6987 ScafM SNP 0051.scaffold00187 439222 1 A T scaffold6987 ScafM SNP 0051.scaffold00187 439225 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439234 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439240 1 A T scaffold6987 ScafM SNP 0051.scaffold00187 439247 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439255 2 AG GT scaffold6987 ScafM SNP 0051.scaffold00187 439264 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439266 1 T G scaffold6987 ScafM SNP 0051.scaffold00187 439297 1 C A scaffold6987 ScafM SNP 0051.scaffold00187 439309 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439312 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439326 1 A G scaffold6987 ScafM SNP 0051.scaffold00187 439336 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439345 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439348 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439361 1 C T scaffold6987 ScafM SNP 0051.scaffold00187 439366 1 T C scaffold6987 ScafM SNP 0051.scaffold00187 439369 1 T G scaffold6987 ScafM SNP 0051.scaffold00187 439383 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439386 1 G A scaffold6987 ScafM SNP 0051.scaffold00187 439389 2 TC GG scaffold6987 ScafM SNP 0051.scaffold00187 439393 1 T C scaffold6987 ReadM SNP 0051.scaffold00187 449783 1 A G - ReadM SNP 0051.scaffold00187 449850 1 A G - ReadM SNP 0051.scaffold00187 450046 1 T A - ReadM SNP 0051.scaffold00187 450820 1 G A - ReadM SNP 0051.scaffold00187 451333 1 C A - Both SNP 0052.scaffold00194 5902 1 A T scaffold24224 ScafM INDEL 0052.scaffold00194 39727 1 . A scaffold1457 ScafM INDEL 0052.scaffold00194 39753 1 . A scaffold1457 ScafM INDEL 0052.scaffold00194 39799 1 . A scaffold1457 ScafM INDEL 0052.scaffold00194 39809 1 A . scaffold1457 ScafM INDEL 0052.scaffold00194 43831 1 . T scaffold8487 ScafM SNP 0052.scaffold00194 46639 1 G A scaffold8487 ScafM SNP 0052.scaffold00194 46662 1 C A scaffold8487 ScafM SNP 0052.scaffold00194 46681 1 A T scaffold8487 ScafM SNP 0052.scaffold00194 46708 1 T G scaffold8487 Both SNP 0052.scaffold00194 52870 1 A G scaffold8487 ReadM SNP 0052.scaffold00194 53324 1 A T - ReadM SNP 0052.scaffold00194 100511 1 G A - ScafM INDEL 0052.scaffold00194 132498 1 . T scaffold11159 ScafM SNP 0052.scaffold00194 136734 1 A G scaffold11159 ScafM SNP 0052.scaffold00194 136740 1 G T scaffold11159 ScafM SNP 0052.scaffold00194 136779 1 A G scaffold11159 ScafM INDEL 0052.scaffold00194 151419 1 . C scaffold25618 ReadM INDEL 0052.scaffold00194 163642 1 . T - ScafM SNP 0052.scaffold00194 175472 2 GT TG scaffold11159 ReadM SNP 0052.scaffold00194 176172 1 G A - ScafM INDEL 0052.scaffold00194 183655 1 G . scaffold11159 Both INDEL 0052.scaffold00194 189229 1 . A scaffold11159 ScafM INDEL 0052.scaffold00194 206410 10 .......... TACAATAGGC scaffold1792 ReadM SNP 0052.scaffold00194 232489 1 T C - ScafM SNP 0052.scaffold00194 261179 1 A T scaffold23 ScafM SNP 0052.scaffold00194 264070 1 A G scaffold23 ScafM SNP 0052.scaffold00194 264159 1 G T scaffold23 ScafM SNP 0052.scaffold00194 264185 1 G A scaffold23 ScafM SNP 0052.scaffold00194 264218 1 T C scaffold23 ScafM INDEL 0052.scaffold00194 264225 2 .. GT scaffold23 ScafM SNP 0052.scaffold00194 264237 1 C G scaffold23 ScafM SNP 0052.scaffold00194 264246 1 C G scaffold23 ScafM SNP 0052.scaffold00194 269901 1 C G scaffold23 Both SNP 0052.scaffold00194 284739 1 G T scaffold23 ScafM INDEL 0052.scaffold00194 326019 18 .................. ATATATATATATATATAT scaffold16944 ScafM INDEL 0052.scaffold00194 326402 1 . T scaffold16944 ScafM INDEL 0052.scaffold00194 333472 1 . G scaffold16944 ScafM SNP 0052.scaffold00194 347810 1 G T scaffold16944 ScafM SNP 0052.scaffold00194 355740 1 A G scaffold2630 ScafM SNP 0052.scaffold00194 358668 1 A T scaffold2630 ScafM SNP 0052.scaffold00194 359001 1 C T scaffold2630 ScafM SNP 0052.scaffold00194 359347 1 A G scaffold2630 ScafM INDEL 0052.scaffold00194 360012 75 ........................................................................... AAAAAGAGGAACAAAAGATATGATGGGATTGATTAAACAACACGGCAAAAGAGGAGCAAAAAAGATTAAATTCCC scaffold2630 ScafM SNP 0052.scaffold00194 361821 1 G A scaffold2630 ScafM SNP 0052.scaffold00194 367517 1 G T scaffold2630 ScafM SNP 0052.scaffold00194 368899 1 G A scaffold2630 Both SNP 0052.scaffold00194 374698 1 T C scaffold2630 ReadM SNP 0052.scaffold00194 375801 1 C T - Both SNP 0052.scaffold00194 376053 1 G A scaffold2630 ScafM INDEL 0052.scaffold00194 379190 1 . T scaffold2630 ScafM INDEL 0052.scaffold00194 379851 2 .. TT scaffold2630 ScafM SNP 0052.scaffold00194 390326 1 G A scaffold2630 ScafM INDEL 0052.scaffold00194 394317 3 ... CCC scaffold2630 ScafM SNP 0052.scaffold00194 406122 1 A T scaffold2630 ScafM SNP 0052.scaffold00194 420388 1 T G scaffold2630 Both SNP 0052.scaffold00194 420949 1 C A scaffold2630 ScafM INDEL 0052.scaffold00194 500652 10 .......... CCCCCCCCCC scaffold6330 ReadM SNP 0052.scaffold00194 529287 1 A G - ScafM SNP 0052.scaffold00194 540563 1 G T scaffold6259 ScafM SNP 0052.scaffold00194 540570 1 G A scaffold6259 ScafM SNP 0052.scaffold00194 540646 1 T C scaffold6259 ScafM SNP 0052.scaffold00194 540649 1 G A scaffold6259 ReadM SNP 0052.scaffold00194 582037 1 A G - ScafM INDEL 0052.scaffold00194 600091 9 ......... AAAAAAAAA scaffold8042 ReadM SNP 0052.scaffold00194 608850 1 A G - ReadM INDEL 0052.scaffold00194 668913 1 T . - ScafM INDEL 0052.scaffold00194 697562 4 ACCA .... scaffold3340 ScafM INDEL 0052.scaffold00194 697567 1 A . scaffold3340 ScafM SNP 0052.scaffold00194 708231 1 A G scaffold3340 ScafM INDEL 0052.scaffold00194 709834 1 A . scaffold3340 ScafM INDEL 0052.scaffold00194 716775 1 A . scaffold3340 ReadM SNP 0052.scaffold00194 716841 1 G A - ScafM SNP 0052.scaffold00194 717369 1 G A scaffold3340 ScafM INDEL 0052.scaffold00194 764842 1 . C scaffold7654 ReadM SNP 0052.scaffold00194 778840 1 T C - ReadM SNP 0052.scaffold00194 793845 1 A G - ScafM SNP 0052.scaffold00194 810323 1 G T scaffold21699 ReadM INDEL 0052.scaffold00194 853325 2 CC .. - ReadM SNP 0052.scaffold00194 859810 1 T C - ScafM SNP 0052.scaffold00194 880830 2 GG AA scaffold8991 ScafM SNP 0052.scaffold00194 880868 1 G T scaffold8991 ReadM SNP 0053.scaffold00196 467 1 T G - ReadM SNP 0053.scaffold00196 493 1 C G - ReadM SNP 0053.scaffold00196 524 1 A G - ReadM SNP 0053.scaffold00196 845 1 A T - ReadM SNP 0053.scaffold00196 959 1 A G - ReadM SNP 0053.scaffold00196 1027 1 A G - ReadM SNP 0053.scaffold00196 1202 1 T C - ReadM INDEL 0053.scaffold00196 1205 1 T . - ReadM SNP 0053.scaffold00196 1548 1 T C - ReadM SNP 0053.scaffold00196 1652 1 T G - ReadM SNP 0053.scaffold00196 1930 1 G C - ReadM SNP 0053.scaffold00196 2131 1 T C - ReadM SNP 0053.scaffold00196 2473 1 A G - ReadM SNP 0053.scaffold00196 2487 1 A G - ReadM SNP 0053.scaffold00196 2626 1 G A - ReadM SNP 0053.scaffold00196 2632 1 G A - ReadM SNP 0053.scaffold00196 2755 1 A G - ReadM SNP 0053.scaffold00196 2761 1 T C - ReadM SNP 0053.scaffold00196 3616 1 T C - ReadM SNP 0053.scaffold00196 4024 1 C T - ReadM SNP 0053.scaffold00196 4056 1 T A - ReadM SNP 0053.scaffold00196 4062 1 A G - ReadM SNP 0053.scaffold00196 4086 1 T C - ReadM SNP 0053.scaffold00196 4095 1 C A - ReadM SNP 0053.scaffold00196 4436 1 A C - ReadM SNP 0053.scaffold00196 4511 1 A T - ReadM SNP 0053.scaffold00196 4755 1 T A - ReadM SNP 0053.scaffold00196 4787 1 C T - ReadM SNP 0053.scaffold00196 5016 1 T C - ReadM SNP 0053.scaffold00196 5040 1 G C - ReadM SNP 0053.scaffold00196 5180 1 G T - ReadM SNP 0053.scaffold00196 5284 1 T C - ReadM SNP 0053.scaffold00196 5334 1 A G - ReadM SNP 0053.scaffold00196 5807 1 C A - ReadM SNP 0053.scaffold00196 6030 1 A G - ReadM SNP 0053.scaffold00196 6211 1 G A - ReadM SNP 0053.scaffold00196 8952 1 C A - ReadM SNP 0053.scaffold00196 8962 1 C T - ReadM SNP 0053.scaffold00196 9168 1 C T - ReadM SNP 0053.scaffold00196 9217 1 T G - ReadM SNP 0053.scaffold00196 11303 1 A T - ReadM SNP 0053.scaffold00196 11411 1 T G - ReadM SNP 0053.scaffold00196 11427 1 C T - ReadM SNP 0053.scaffold00196 11433 1 G A - ReadM SNP 0053.scaffold00196 12267 1 G A - ReadM SNP 0053.scaffold00196 12342 1 C T - ReadM SNP 0053.scaffold00196 12373 1 A G - ReadM SNP 0053.scaffold00196 12577 1 C T - ReadM SNP 0053.scaffold00196 12670 1 G A - ReadM SNP 0053.scaffold00196 12681 1 A T - ReadM SNP 0053.scaffold00196 12809 1 G A - ReadM SNP 0053.scaffold00196 13069 1 C T - ReadM SNP 0053.scaffold00196 13129 1 A G - ReadM SNP 0053.scaffold00196 13328 1 T C - ReadM SNP 0053.scaffold00196 13756 1 C T - ReadM INDEL 0053.scaffold00196 13781 1 . A - ReadM SNP 0053.scaffold00196 13895 1 T C - ReadM SNP 0053.scaffold00196 13970 1 A G - ReadM SNP 0053.scaffold00196 13991 1 A T - ReadM SNP 0053.scaffold00196 14034 1 T A - ReadM SNP 0053.scaffold00196 14059 1 C G - ReadM SNP 0053.scaffold00196 14103 1 T A - ReadM SNP 0053.scaffold00196 14167 1 T C - ReadM SNP 0053.scaffold00196 14176 1 T G - ReadM SNP 0053.scaffold00196 14310 1 G T - ReadM SNP 0053.scaffold00196 14490 1 A C - ReadM SNP 0053.scaffold00196 14602 1 T C - ReadM SNP 0053.scaffold00196 14655 1 T A - ReadM SNP 0053.scaffold00196 14823 1 C T - ReadM SNP 0053.scaffold00196 15070 1 C T - ReadM SNP 0053.scaffold00196 15135 1 G T - ReadM SNP 0053.scaffold00196 15143 1 G A - ReadM SNP 0053.scaffold00196 15709 1 G T - ReadM SNP 0053.scaffold00196 15759 1 C A - ReadM SNP 0053.scaffold00196 15932 1 G A - ReadM SNP 0053.scaffold00196 16028 1 A C - ReadM SNP 0053.scaffold00196 16139 1 T C - ReadM SNP 0053.scaffold00196 16168 1 T C - ReadM SNP 0053.scaffold00196 16213 1 A G - ReadM SNP 0053.scaffold00196 16344 1 G A - ReadM SNP 0053.scaffold00196 16382 1 C T - ReadM SNP 0053.scaffold00196 16393 1 G T - ReadM SNP 0053.scaffold00196 16457 1 G A - ReadM SNP 0053.scaffold00196 18946 1 A G - ReadM SNP 0053.scaffold00196 20069 1 C T - ReadM INDEL 0053.scaffold00196 26919 1 C . - ReadM SNP 0053.scaffold00196 27006 1 A G - ReadM SNP 0053.scaffold00196 27182 1 T C - Both SNP 0053.scaffold00196 27788 1 G A scaffold17452 Both SNP 0053.scaffold00196 27829 1 T A scaffold17452 Both SNP 0053.scaffold00196 27891 1 T G scaffold17452 Both SNP 0053.scaffold00196 28010 1 T G scaffold17452 Both SNP 0053.scaffold00196 28051 1 G T scaffold17452 Both SNP 0053.scaffold00196 28058 1 T G scaffold17452 Both SNP 0053.scaffold00196 28089 1 T A scaffold17452 ReadM SNP 0053.scaffold00196 28369 1 A G - ReadM SNP 0053.scaffold00196 28401 1 G A - ReadM SNP 0053.scaffold00196 28444 1 A C - Both INDEL 0053.scaffold00196 28596 1 A . scaffold17452 Both SNP 0053.scaffold00196 28605 1 A G scaffold17452 ScafM INDEL 0053.scaffold00196 28623 3 AAA .TT scaffold17452 Both SNP 0053.scaffold00196 28674 1 G A scaffold17452 Both SNP 0053.scaffold00196 28725 1 C G scaffold17452 Both SNP 0053.scaffold00196 28852 1 C A scaffold17452 Both SNP 0053.scaffold00196 28913 1 T C scaffold17452 Both SNP 0053.scaffold00196 29025 1 T A scaffold17452 ReadM SNP 0053.scaffold00196 29058 1 T C - ReadM SNP 0053.scaffold00196 29140 1 G A - ReadM SNP 0053.scaffold00196 29428 1 T C - ReadM SNP 0053.scaffold00196 29445 1 T G - ReadM SNP 0053.scaffold00196 29497 1 T C - ReadM SNP 0053.scaffold00196 29522 1 T G - ReadM SNP 0053.scaffold00196 29578 1 A T - ReadM SNP 0053.scaffold00196 29695 1 T C - ReadM SNP 0053.scaffold00196 29736 1 A G - ReadM SNP 0053.scaffold00196 29829 1 A G - ReadM SNP 0053.scaffold00196 30028 1 C A - ReadM SNP 0053.scaffold00196 30149 1 G T - ReadM SNP 0053.scaffold00196 30407 1 A G - ReadM SNP 0053.scaffold00196 30490 1 T C - ReadM SNP 0053.scaffold00196 30657 1 C A - ReadM INDEL 0053.scaffold00196 30713 1 T . - ReadM SNP 0053.scaffold00196 30855 1 C T - ReadM SNP 0053.scaffold00196 30919 1 G A - ReadM SNP 0053.scaffold00196 30960 1 A G - ReadM SNP 0053.scaffold00196 30992 1 G T - ReadM SNP 0053.scaffold00196 31018 1 A T - ReadM SNP 0053.scaffold00196 31110 1 G C - ReadM SNP 0053.scaffold00196 31120 1 C T - ReadM SNP 0053.scaffold00196 31332 1 T C - ReadM SNP 0053.scaffold00196 31467 1 A T - ReadM SNP 0053.scaffold00196 31604 1 A T - ReadM SNP 0053.scaffold00196 31666 1 C T - ReadM SNP 0053.scaffold00196 31671 1 T G - ReadM SNP 0053.scaffold00196 31765 1 C T - ReadM SNP 0053.scaffold00196 31831 1 G A - ReadM INDEL 0053.scaffold00196 31899 1 T . - Both SNP 0053.scaffold00196 31976 1 G A scaffold17452 Both SNP 0053.scaffold00196 32038 1 C T scaffold17452 Both SNP 0053.scaffold00196 32078 1 G C scaffold17452 ScafM SNP 0053.scaffold00196 32371 1 T G scaffold17452 Both SNP 0053.scaffold00196 32386 1 T A scaffold17452 ReadM SNP 0053.scaffold00196 32619 1 G A - ReadM SNP 0053.scaffold00196 32636 1 T A - ReadM SNP 0053.scaffold00196 32643 1 A G - ReadM INDEL 0053.scaffold00196 32759 1 . T - Both SNP 0053.scaffold00196 32809 1 A T scaffold17452 ReadM SNP 0053.scaffold00196 32997 1 G A - ReadM SNP 0053.scaffold00196 33082 1 T C - ReadM SNP 0053.scaffold00196 33085 1 G T - ReadM SNP 0053.scaffold00196 33158 1 G A - ReadM SNP 0053.scaffold00196 33166 1 T C - Both SNP 0053.scaffold00196 33208 1 G C scaffold17452 ScafM INDEL 0053.scaffold00196 33278 2 AG .. scaffold17452 ScafM SNP 0053.scaffold00196 33293 1 A T scaffold17452 ReadM SNP 0053.scaffold00196 33390 1 A G - ReadM SNP 0053.scaffold00196 33465 1 T A - ReadM SNP 0053.scaffold00196 33658 1 A G - ReadM SNP 0053.scaffold00196 33681 1 T C - ReadM SNP 0053.scaffold00196 33713 1 A C - ReadM SNP 0053.scaffold00196 33746 1 A G - ReadM SNP 0053.scaffold00196 33868 1 G A - ReadM SNP 0053.scaffold00196 33928 1 T C - ReadM SNP 0053.scaffold00196 34225 1 G A - ReadM SNP 0053.scaffold00196 34276 1 A T - ReadM SNP 0053.scaffold00196 34318 1 A G - ReadM SNP 0053.scaffold00196 34323 1 T C - ReadM SNP 0053.scaffold00196 34451 1 T A - ReadM SNP 0053.scaffold00196 34530 1 C A - ReadM SNP 0053.scaffold00196 34622 1 C G - ReadM SNP 0053.scaffold00196 34677 1 G A - ReadM SNP 0053.scaffold00196 34708 1 T C - ReadM SNP 0053.scaffold00196 34774 1 A G - ReadM SNP 0053.scaffold00196 34787 1 A G - ReadM SNP 0053.scaffold00196 35034 1 C T - ReadM SNP 0053.scaffold00196 35040 1 A G - Both SNP 0053.scaffold00196 35250 1 T A scaffold17452 Both SNP 0053.scaffold00196 35269 1 C T scaffold17452 Both SNP 0053.scaffold00196 35371 1 G A scaffold17452 Both SNP 0053.scaffold00196 35391 1 T C scaffold17452 ScafM INDEL 0053.scaffold00196 35456 2 AA .T scaffold17452 Both INDEL 0053.scaffold00196 35489 1 . A scaffold17452 ReadM SNP 0053.scaffold00196 35619 1 C T - Both SNP 0053.scaffold00196 35753 1 G A scaffold17452 Both SNP 0053.scaffold00196 35772 1 A G scaffold17452 ReadM SNP 0053.scaffold00196 35931 1 G T - Both SNP 0053.scaffold00196 35989 1 A G scaffold17452 Both SNP 0053.scaffold00196 36027 1 T C scaffold17452 Both SNP 0053.scaffold00196 36084 1 A T scaffold17452 ReadM SNP 0053.scaffold00196 36289 1 T C - Both SNP 0053.scaffold00196 36400 1 C T scaffold17452 Both SNP 0053.scaffold00196 36539 1 G A scaffold17452 ReadM SNP 0053.scaffold00196 36683 1 G A - ReadM SNP 0053.scaffold00196 36702 1 T A - Both SNP 0053.scaffold00196 36778 1 C T scaffold17452 Both SNP 0053.scaffold00196 36794 1 A G scaffold17452 Both SNP 0053.scaffold00196 36828 1 A T scaffold17452 ScafM SNP 0053.scaffold00196 36904 2 TC AT scaffold17452 Both SNP 0053.scaffold00196 36991 1 A T scaffold17452 Both SNP 0053.scaffold00196 37069 1 C G scaffold17452 Both SNP 0053.scaffold00196 37104 1 T C scaffold17452 Both SNP 0053.scaffold00196 37162 1 A G scaffold17452 Both SNP 0053.scaffold00196 37165 1 G T scaffold17452 Both SNP 0053.scaffold00196 37188 1 T C scaffold17452 Both SNP 0053.scaffold00196 37312 1 C T scaffold17452 Both SNP 0053.scaffold00196 37326 1 G A scaffold17452 Both SNP 0053.scaffold00196 37343 1 T C scaffold17452 Both SNP 0053.scaffold00196 37419 1 G A scaffold17452 Both SNP 0053.scaffold00196 37486 1 T C scaffold17452 Both SNP 0053.scaffold00196 37496 1 G A scaffold17452 Both SNP 0053.scaffold00196 37532 1 T C scaffold17452 ScafM INDEL 0053.scaffold00196 37578 1 C . scaffold17452 ScafM INDEL 0053.scaffold00196 37581 3 CTT ... scaffold17452 ScafM SNP 0053.scaffold00196 37638 1 C T scaffold17452 ScafM SNP 0053.scaffold00196 37642 1 G T scaffold17452 ScafM INDEL 0053.scaffold00196 37664 2 TT .A scaffold17452 Both SNP 0053.scaffold00196 37728 1 G T scaffold17452 Both SNP 0053.scaffold00196 37751 1 C A scaffold17452 Both SNP 0053.scaffold00196 37787 1 G A scaffold17452 Both SNP 0053.scaffold00196 37802 1 G T scaffold17452 Both SNP 0053.scaffold00196 37893 1 A G scaffold17452 ScafM INDEL 0053.scaffold00196 37908 3 ... TTT scaffold17452 Both SNP 0053.scaffold00196 37931 1 T C scaffold17452 ScafM SNP 0053.scaffold00196 38006 1 C T scaffold17452 ScafM INDEL 0053.scaffold00196 38011 4 GCTT .... scaffold17452 ScafM SNP 0053.scaffold00196 38035 1 G A scaffold17452 ScafM SNP 0053.scaffold00196 38039 1 A C scaffold17452 Both SNP 0053.scaffold00196 38109 2 AT GC scaffold17452 Both SNP 0053.scaffold00196 38177 1 G T scaffold17452 Both SNP 0053.scaffold00196 38205 1 G T scaffold17452 Both SNP 0053.scaffold00196 38331 1 G A scaffold17452 Both SNP 0053.scaffold00196 38398 1 G C scaffold17452 Both SNP 0053.scaffold00196 38401 1 G A scaffold17452 Both SNP 0053.scaffold00196 38448 1 A G scaffold17452 Both SNP 0053.scaffold00196 38457 1 T C scaffold17452 ScafM INDEL 0053.scaffold00196 38526 5 ..... TTTTT scaffold17452 ScafM SNP 0053.scaffold00196 38642 2 AC GT scaffold17452 ScafM SNP 0053.scaffold00196 38647 1 G A scaffold17452 ReadM SNP 0053.scaffold00196 38664 1 G A - ReadM SNP 0053.scaffold00196 38822 1 T C - ReadM SNP 0053.scaffold00196 38835 1 A G - ReadM SNP 0053.scaffold00196 38961 1 C T - ReadM SNP 0053.scaffold00196 39096 1 T G - ReadM SNP 0053.scaffold00196 39111 1 T G - ReadM SNP 0053.scaffold00196 39120 1 T C - ReadM SNP 0053.scaffold00196 39153 1 A T - ReadM SNP 0053.scaffold00196 39246 1 A G - ReadM SNP 0053.scaffold00196 39252 1 G A - Both SNP 0053.scaffold00196 39357 1 A G scaffold17452 Both SNP 0053.scaffold00196 39381 1 G T scaffold17452 ScafM SNP 0053.scaffold00196 39537 1 C G scaffold17452 Both INDEL 0053.scaffold00196 39549 1 A . scaffold17452 Both SNP 0053.scaffold00196 39619 1 G A scaffold17452 Both SNP 0053.scaffold00196 39666 1 G A scaffold17452 Both SNP 0053.scaffold00196 39741 1 C G scaffold17452 Both SNP 0053.scaffold00196 39841 1 T C scaffold17452 Both SNP 0053.scaffold00196 39909 1 A G scaffold17452 Both SNP 0053.scaffold00196 40030 1 T G scaffold17452 Both SNP 0053.scaffold00196 40187 1 C T scaffold17452 ReadM SNP 0053.scaffold00196 40552 1 A G - ReadM INDEL 0053.scaffold00196 41567 2 .. AA - ReadM SNP 0053.scaffold00196 41972 1 G A - ReadM SNP 0053.scaffold00196 43239 1 T G - ReadM SNP 0053.scaffold00196 43347 1 C T - ReadM SNP 0053.scaffold00196 43397 1 A T - ReadM INDEL 0053.scaffold00196 43538 1 C . - ReadM SNP 0053.scaffold00196 43543 1 T G - ReadM SNP 0053.scaffold00196 43577 1 T C - ReadM SNP 0053.scaffold00196 43633 1 T C - ReadM SNP 0053.scaffold00196 43873 1 A G - ReadM SNP 0053.scaffold00196 43923 1 T C - ReadM SNP 0053.scaffold00196 43954 1 C T - ReadM SNP 0053.scaffold00196 43956 1 A G - ReadM SNP 0053.scaffold00196 44045 1 A T - ReadM SNP 0053.scaffold00196 44553 1 G A - ReadM SNP 0053.scaffold00196 44643 1 T C - ReadM SNP 0053.scaffold00196 44982 1 C T - ReadM SNP 0053.scaffold00196 45074 1 C T - ReadM SNP 0053.scaffold00196 45219 1 A G - ReadM SNP 0053.scaffold00196 46512 1 A T - ReadM SNP 0053.scaffold00196 46629 1 G A - Both SNP 0053.scaffold00196 46822 1 T C scaffold5761 Both SNP 0053.scaffold00196 46830 1 G A scaffold5761 ReadM SNP 0053.scaffold00196 47470 1 C T - ReadM SNP 0053.scaffold00196 47528 1 G A - ReadM SNP 0053.scaffold00196 47534 1 A G - ReadM SNP 0053.scaffold00196 47619 1 A C - ReadM SNP 0053.scaffold00196 47638 1 G A - ReadM SNP 0053.scaffold00196 47645 1 C A - ReadM SNP 0053.scaffold00196 47722 1 T C - ReadM SNP 0053.scaffold00196 47946 1 A G - ReadM SNP 0053.scaffold00196 48034 1 A G - ReadM SNP 0053.scaffold00196 48121 1 A T - ScafM SNP 0053.scaffold00196 48410 1 T C scaffold5761 ScafM SNP 0053.scaffold00196 48415 1 A G scaffold5761 ScafM INDEL 0053.scaffold00196 48420 1 . A scaffold5761 ScafM SNP 0053.scaffold00196 48442 1 T C scaffold5761 ScafM SNP 0053.scaffold00196 48445 1 A G scaffold5761 ScafM INDEL 0053.scaffold00196 48465 2 AA .. scaffold5761 ScafM SNP 0053.scaffold00196 48468 1 C T scaffold5761 ScafM SNP 0053.scaffold00196 48486 1 G A scaffold5761 ScafM SNP 0053.scaffold00196 48490 1 G A scaffold5761 ScafM SNP 0053.scaffold00196 48496 1 T C scaffold5761 ScafM SNP 0053.scaffold00196 48507 1 T A scaffold5761 ScafM INDEL 0053.scaffold00196 48517 1 T . scaffold5761 ScafM SNP 0053.scaffold00196 48524 1 C G scaffold5761 ScafM SNP 0053.scaffold00196 48532 1 A T scaffold5761 ScafM INDEL 0053.scaffold00196 48536 1 A . scaffold5761 ScafM SNP 0053.scaffold00196 48546 1 A G scaffold5761 ScafM INDEL 0053.scaffold00196 48550 8 ........ ATAAATTT scaffold5761 ScafM SNP 0053.scaffold00196 48553 1 G A scaffold5761 ScafM SNP 0053.scaffold00196 48566 1 G A scaffold5761 ScafM SNP 0053.scaffold00196 48568 1 A G scaffold5761 ScafM SNP 0053.scaffold00196 48596 2 GA CG scaffold5761 ScafM SNP 0053.scaffold00196 48601 1 C T scaffold5761 ScafM SNP 0053.scaffold00196 48604 1 A G scaffold5761 ScafM INDEL 0053.scaffold00196 48631 1 . G scaffold5761 ScafM INDEL 0053.scaffold00196 48660 3 ... AAC scaffold5761 ScafM SNP 0053.scaffold00196 48765 1 C A scaffold5761 ScafM INDEL 0053.scaffold00196 48843 2 TT .. scaffold5761 ScafM SNP 0053.scaffold00196 48951 1 T A scaffold5761 ScafM INDEL 0053.scaffold00196 49427 3 ... TTT scaffold5761 ScafM INDEL 0053.scaffold00196 49730 1 . T scaffold5761 Both SNP 0053.scaffold00196 51364 1 T C scaffold5761 ReadM SNP 0053.scaffold00196 53172 1 A G - ReadM SNP 0053.scaffold00196 55958 1 G A - ReadM SNP 0053.scaffold00196 56763 1 G T - Both SNP 0053.scaffold00196 58107 1 A T scaffold5761 ReadM SNP 0053.scaffold00196 58601 1 A G - ReadM SNP 0053.scaffold00196 61022 1 G A - ReadM SNP 0053.scaffold00196 62059 1 C T - ReadM SNP 0053.scaffold00196 62163 1 G T - ReadM SNP 0053.scaffold00196 62513 1 G A - ReadM SNP 0053.scaffold00196 62926 1 G A - ReadM SNP 0053.scaffold00196 63030 1 G A - ReadM SNP 0053.scaffold00196 65711 1 T C - ReadM SNP 0053.scaffold00196 66388 1 A G - ReadM SNP 0053.scaffold00196 66454 1 C G - ReadM SNP 0053.scaffold00196 68127 1 C T - ReadM SNP 0053.scaffold00196 68876 1 C A - ReadM SNP 0053.scaffold00196 70053 1 C T - ReadM SNP 0053.scaffold00196 71110 1 A G - ReadM SNP 0053.scaffold00196 71206 1 T A - Both SNP 0053.scaffold00196 71514 1 A T scaffold2659 Both SNP 0053.scaffold00196 72654 1 G A scaffold2659 Both SNP 0053.scaffold00196 72727 1 C T scaffold2659 Both SNP 0053.scaffold00196 73124 1 C A scaffold2659 Both SNP 0053.scaffold00196 73317 1 A G scaffold2659 Both SNP 0053.scaffold00196 73363 1 T C scaffold2659 ReadM SNP 0053.scaffold00196 73824 1 C T - Both INDEL 0053.scaffold00196 74142 2 .. AT scaffold2659 ReadM SNP 0053.scaffold00196 75954 1 T A - ScafM SNP 0053.scaffold00196 76221 1 G T scaffold2659 ReadM SNP 0053.scaffold00196 77201 1 G A - ScafM SNP 0053.scaffold00196 77670 1 C G scaffold2659 ReadM SNP 0053.scaffold00196 79056 1 A G - ReadM SNP 0053.scaffold00196 79197 1 G A - ReadM SNP 0053.scaffold00196 80969 1 A C - ReadM SNP 0053.scaffold00196 80974 1 T C - ReadM SNP 0053.scaffold00196 81183 1 T G - ReadM SNP 0053.scaffold00196 81247 1 T C - ScafM SNP 0053.scaffold00196 81809 1 A T scaffold2659 ReadM SNP 0053.scaffold00196 82882 1 G A - ReadM INDEL 0053.scaffold00196 83224 1 A . - ReadM SNP 0053.scaffold00196 83658 1 A T - ReadM SNP 0053.scaffold00196 83698 1 G A - ReadM SNP 0053.scaffold00196 83749 1 C T - ReadM SNP 0053.scaffold00196 83778 1 A G - Both SNP 0053.scaffold00196 84047 1 A G scaffold2659 ReadM SNP 0053.scaffold00196 84467 1 A C - ReadM SNP 0053.scaffold00196 84575 1 G A - ReadM SNP 0053.scaffold00196 84639 1 A G - Both SNP 0053.scaffold00196 84904 1 C A scaffold2659 Both SNP 0053.scaffold00196 85337 1 G C scaffold2659 Both INDEL 0053.scaffold00196 85342 1 . T scaffold2659 Both SNP 0053.scaffold00196 85511 1 A G scaffold2659 ReadM SNP 0053.scaffold00196 85858 1 T C - ReadM SNP 0053.scaffold00196 85986 1 G A - ReadM SNP 0053.scaffold00196 86356 1 T G - ReadM SNP 0053.scaffold00196 86658 1 T C - ReadM INDEL 0053.scaffold00196 86909 1 T . - ScafM INDEL 0053.scaffold00196 88092 16 ................ GTATCGCATGATGACA scaffold2659 Both SNP 0053.scaffold00196 88341 1 G A scaffold2659 Both SNP 0053.scaffold00196 88476 1 A G scaffold2659 Both SNP 0053.scaffold00196 88485 1 C T scaffold2659 ScafM SNP 0053.scaffold00196 88509 1 G T scaffold2659 ScafM SNP 0053.scaffold00196 88512 1 A G scaffold2659 Both SNP 0053.scaffold00196 88698 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 88906 1 T G scaffold2659 ScafM INDEL 0053.scaffold00196 88907 1 . T scaffold2659 ScafM SNP 0053.scaffold00196 88909 1 G T scaffold2659 ScafM SNP 0053.scaffold00196 88948 1 G T scaffold2659 ScafM SNP 0053.scaffold00196 89074 1 C G scaffold2659 ScafM SNP 0053.scaffold00196 89080 1 G C scaffold2659 ScafM SNP 0053.scaffold00196 89669 1 C T scaffold2659 ScafM INDEL 0053.scaffold00196 89681 15 ............... AAGGTCACGAGATTA scaffold2659 ScafM SNP 0053.scaffold00196 89773 1 G C scaffold2659 ScafM SNP 0053.scaffold00196 89782 1 C A scaffold2659 ReadM SNP 0053.scaffold00196 89942 1 C T - ReadM SNP 0053.scaffold00196 89992 1 C T - ReadM SNP 0053.scaffold00196 90087 1 T C - ReadM SNP 0053.scaffold00196 90127 1 T C - ScafM SNP 0053.scaffold00196 90188 1 G A scaffold2659 ScafM SNP 0053.scaffold00196 90203 3 AAC TTT scaffold2659 Both SNP 0053.scaffold00196 90276 1 T C scaffold2659 Both SNP 0053.scaffold00196 90296 1 G A scaffold2659 ReadM SNP 0053.scaffold00196 90395 1 G A - ReadM SNP 0053.scaffold00196 90535 1 T C - ReadM SNP 0053.scaffold00196 90623 1 G T - ReadM SNP 0053.scaffold00196 90679 1 A T - ReadM SNP 0053.scaffold00196 90697 2 AT GG - ReadM SNP 0053.scaffold00196 90859 1 C T - ReadM SNP 0053.scaffold00196 91034 1 G A - ReadM SNP 0053.scaffold00196 91064 1 A G - ScafM SNP 0053.scaffold00196 91171 1 A T scaffold2659 ScafM INDEL 0053.scaffold00196 91255 1 G . scaffold2659 Both SNP 0053.scaffold00196 91291 1 T C scaffold2659 Both SNP 0053.scaffold00196 91298 1 G A scaffold2659 Both SNP 0053.scaffold00196 91334 1 C T scaffold2659 Both SNP 0053.scaffold00196 91379 1 C A scaffold2659 Both INDEL 0053.scaffold00196 91462 1 G . scaffold2659 ScafM INDEL 0053.scaffold00196 91544 9 ACATATAGT ......... scaffold2659 ScafM SNP 0053.scaffold00196 91597 1 A G scaffold2659 ScafM INDEL 0053.scaffold00196 91646 4 TTTT .... scaffold2659 ScafM SNP 0053.scaffold00196 91651 1 T A scaffold2659 ScafM SNP 0053.scaffold00196 91656 1 A G scaffold2659 ScafM INDEL 0053.scaffold00196 91682 6 ...... TTTTTT scaffold2659 ScafM SNP 0053.scaffold00196 91684 1 G T scaffold2659 Both SNP 0053.scaffold00196 91742 1 G T scaffold2659 Both SNP 0053.scaffold00196 91773 1 A G scaffold2659 ReadM SNP 0053.scaffold00196 91834 1 T G - ReadM SNP 0053.scaffold00196 91896 1 C T - ReadM SNP 0053.scaffold00196 91902 1 A G - ReadM SNP 0053.scaffold00196 91940 1 T G - ReadM SNP 0053.scaffold00196 91978 1 A G - ReadM SNP 0053.scaffold00196 91983 1 G T - Both SNP 0053.scaffold00196 92092 1 G T scaffold2659 Both SNP 0053.scaffold00196 92107 1 A G scaffold2659 Both INDEL 0053.scaffold00196 92127 1 A . scaffold2659 ScafM INDEL 0053.scaffold00196 92215 7 ACTTACT ....... scaffold2659 Both INDEL 0053.scaffold00196 92234 1 . A scaffold2659 Both SNP 0053.scaffold00196 92332 1 C T scaffold2659 Both SNP 0053.scaffold00196 92393 1 A T scaffold2659 ScafM INDEL 0053.scaffold00196 92588 1 T . scaffold2659 ScafM INDEL 0053.scaffold00196 92624 6 TTTTTT ...... scaffold2659 ScafM SNP 0053.scaffold00196 92785 1 T C scaffold2659 Both SNP 0053.scaffold00196 92826 1 A G scaffold2659 Both SNP 0053.scaffold00196 92891 1 T G scaffold2659 Both SNP 0053.scaffold00196 92930 1 T C scaffold2659 Both SNP 0053.scaffold00196 92971 1 A G scaffold2659 Both SNP 0053.scaffold00196 93046 1 G C scaffold2659 ReadM SNP 0053.scaffold00196 93117 1 A G - ReadM SNP 0053.scaffold00196 93143 1 G C - ReadM SNP 0053.scaffold00196 93197 1 G A - Both SNP 0053.scaffold00196 93252 1 C T scaffold2659 ScafM INDEL 0053.scaffold00196 93268 5 ..... TCTCA scaffold2659 ScafM SNP 0053.scaffold00196 93353 1 A G scaffold2659 ScafM SNP 0053.scaffold00196 93370 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 93381 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 93404 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 93429 1 C A scaffold2659 ScafM SNP 0053.scaffold00196 93485 1 T C scaffold2659 ScafM INDEL 0053.scaffold00196 93498 13 ............. TTTTTGTTTTAAA scaffold2659 ScafM SNP 0053.scaffold00196 93589 1 A T scaffold2659 ScafM SNP 0053.scaffold00196 93612 1 G A scaffold2659 Both SNP 0053.scaffold00196 93637 1 T G scaffold2659 Both SNP 0053.scaffold00196 93746 1 G A scaffold2659 ScafM SNP 0053.scaffold00196 93769 2 CA TG scaffold2659 ScafM SNP 0053.scaffold00196 93853 1 G C scaffold2659 Both SNP 0053.scaffold00196 93907 1 T A scaffold2659 Both INDEL 0053.scaffold00196 94076 1 G . scaffold2659 Both SNP 0053.scaffold00196 94104 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 94171 1 C T scaffold2659 ScafM SNP 0053.scaffold00196 94192 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 94199 1 A G scaffold2659 Both SNP 0053.scaffold00196 94334 1 A G scaffold2659 ReadM SNP 0053.scaffold00196 94545 1 G A - ReadM SNP 0053.scaffold00196 94733 1 C T - ReadM INDEL 0053.scaffold00196 94837 1 . A - ReadM SNP 0053.scaffold00196 94961 1 C A - ReadM SNP 0053.scaffold00196 94982 1 A G - ReadM SNP 0053.scaffold00196 95224 1 A C - ReadM SNP 0053.scaffold00196 95254 1 T C - ReadM INDEL 0053.scaffold00196 95277 1 . C - ReadM SNP 0053.scaffold00196 95322 1 A G - ReadM SNP 0053.scaffold00196 95360 1 A C - ReadM INDEL 0053.scaffold00196 95409 1 . T - ReadM SNP 0053.scaffold00196 95544 1 C T - ReadM SNP 0053.scaffold00196 95704 1 C A - ReadM SNP 0053.scaffold00196 95724 1 A G - ReadM SNP 0053.scaffold00196 95775 1 C G - ReadM SNP 0053.scaffold00196 95874 1 A C - ReadM SNP 0053.scaffold00196 95892 1 A T - ReadM SNP 0053.scaffold00196 95992 1 T C - ReadM SNP 0053.scaffold00196 96051 1 C T - ReadM SNP 0053.scaffold00196 96761 1 A T - ReadM SNP 0053.scaffold00196 97093 1 G C - ScafM INDEL 0053.scaffold00196 97367 1 . T scaffold2659 Both INDEL 0053.scaffold00196 97466 1 A . scaffold2659 ScafM INDEL 0053.scaffold00196 97500 1 . T scaffold2659 Both INDEL 0053.scaffold00196 97667 2 .. AA scaffold2659 ScafM SNP 0053.scaffold00196 97816 1 A G scaffold2659 ScafM INDEL 0053.scaffold00196 97836 2 TT .. scaffold2659 ScafM INDEL 0053.scaffold00196 97847 1 . T scaffold2659 ScafM SNP 0053.scaffold00196 97904 1 A T scaffold2659 Both SNP 0053.scaffold00196 97937 1 A T scaffold2659 Both SNP 0053.scaffold00196 98084 1 G T scaffold2659 ScafM SNP 0053.scaffold00196 98101 1 C G scaffold2659 ScafM SNP 0053.scaffold00196 98109 1 T A scaffold2659 ReadM SNP 0053.scaffold00196 98167 1 C T - ReadM SNP 0053.scaffold00196 98208 1 C T - ReadM SNP 0053.scaffold00196 98212 1 G C - ReadM SNP 0053.scaffold00196 98307 1 T A - ReadM SNP 0053.scaffold00196 98326 1 T C - ReadM SNP 0053.scaffold00196 98388 1 A G - ReadM SNP 0053.scaffold00196 98445 1 C T - ScafM SNP 0053.scaffold00196 98577 1 A C scaffold2659 ScafM SNP 0053.scaffold00196 98590 1 T C scaffold2659 ScafM SNP 0053.scaffold00196 98595 1 A G scaffold2659 ScafM SNP 0053.scaffold00196 98600 1 C T scaffold2659 ScafM SNP 0053.scaffold00196 98640 1 C G scaffold2659 ScafM SNP 0053.scaffold00196 98648 1 A G scaffold2659 ReadM SNP 0053.scaffold00196 98757 1 T A - ReadM SNP 0053.scaffold00196 98828 1 A G - ReadM SNP 0053.scaffold00196 98889 1 C T - ReadM SNP 0053.scaffold00196 100033 1 A G - ReadM SNP 0053.scaffold00196 100042 1 G A - ReadM SNP 0053.scaffold00196 100072 1 C T - ReadM SNP 0053.scaffold00196 100377 1 A G - ReadM SNP 0053.scaffold00196 100386 1 A G - ReadM SNP 0053.scaffold00196 100505 1 A G - ReadM SNP 0053.scaffold00196 100600 1 T A - ReadM SNP 0053.scaffold00196 100642 1 C T - ReadM SNP 0053.scaffold00196 100711 1 A G - ReadM SNP 0053.scaffold00196 100767 1 C A - ReadM SNP 0053.scaffold00196 100863 1 G A - ReadM SNP 0053.scaffold00196 100882 1 T C - ReadM SNP 0053.scaffold00196 100903 1 C T - ReadM SNP 0053.scaffold00196 100993 1 G A - ReadM SNP 0053.scaffold00196 101284 1 T C - ReadM SNP 0053.scaffold00196 101536 1 A G - ReadM SNP 0053.scaffold00196 101621 1 A G - ReadM SNP 0053.scaffold00196 101719 1 C T - ReadM SNP 0053.scaffold00196 101750 1 A G - ReadM SNP 0053.scaffold00196 101883 1 G A - ReadM SNP 0053.scaffold00196 101900 1 A G - ReadM SNP 0053.scaffold00196 101914 1 T A - ReadM SNP 0053.scaffold00196 101930 1 G C - ReadM SNP 0053.scaffold00196 102115 1 C T - ReadM SNP 0053.scaffold00196 102162 1 C A - ReadM SNP 0053.scaffold00196 102217 1 C G - ReadM SNP 0053.scaffold00196 102233 1 T C - ReadM SNP 0053.scaffold00196 102265 1 C T - ReadM SNP 0053.scaffold00196 102406 1 A C - ReadM SNP 0053.scaffold00196 102419 1 T C - Both SNP 0053.scaffold00196 102533 1 T C scaffold2659 Both SNP 0053.scaffold00196 102538 1 G A scaffold2659 Both SNP 0053.scaffold00196 102566 1 A G scaffold2659 Both SNP 0053.scaffold00196 102628 1 A G scaffold2659 Both SNP 0053.scaffold00196 102703 1 A G scaffold2659 Both SNP 0053.scaffold00196 102723 1 A G scaffold2659 Both SNP 0053.scaffold00196 102735 1 C G scaffold2659 Both SNP 0053.scaffold00196 102808 1 A T scaffold2659 Both SNP 0053.scaffold00196 102850 1 A G scaffold2659 Both SNP 0053.scaffold00196 102949 1 C G scaffold2659 Both SNP 0053.scaffold00196 102951 1 C G scaffold2659 Both SNP 0053.scaffold00196 102978 1 A G scaffold2659 Both SNP 0053.scaffold00196 102998 1 G A scaffold2659 ReadM SNP 0053.scaffold00196 103163 1 C G - ReadM SNP 0053.scaffold00196 103331 1 C T - ReadM SNP 0053.scaffold00196 103336 1 T G - ReadM INDEL 0053.scaffold00196 103394 1 A . - ScafM SNP 0053.scaffold00196 103536 1 A G scaffold2659 ScafM SNP 0053.scaffold00196 103558 1 T A scaffold2659 ScafM SNP 0053.scaffold00196 103565 1 G C scaffold2659 ScafM INDEL 0053.scaffold00196 103607 7 ....... AACAAAA scaffold2659 ScafM SNP 0053.scaffold00196 103628 1 G A scaffold2659 ReadM SNP 0053.scaffold00196 106698 1 T C - ReadM SNP 0053.scaffold00196 106766 1 T C - ReadM SNP 0053.scaffold00196 108885 1 C A - ReadM SNP 0053.scaffold00196 108948 1 G A - ReadM SNP 0053.scaffold00196 108956 1 G A - ReadM SNP 0053.scaffold00196 109037 1 G A - ReadM SNP 0053.scaffold00196 109082 1 A G - ReadM SNP 0053.scaffold00196 109159 1 T C - ReadM SNP 0053.scaffold00196 109244 1 G A - ScafM SNP 0053.scaffold00196 110205 1 A G scaffold575 ReadM SNP 0053.scaffold00196 110806 1 T C - ReadM SNP 0053.scaffold00196 110866 1 T C - ReadM SNP 0053.scaffold00196 110871 1 T C - ReadM SNP 0053.scaffold00196 110894 1 G C - ReadM SNP 0053.scaffold00196 110949 1 T G - ReadM SNP 0053.scaffold00196 111107 1 T C - ReadM SNP 0053.scaffold00196 111118 1 C T - ReadM SNP 0053.scaffold00196 111200 2 GG TT - ReadM SNP 0053.scaffold00196 111246 1 T C - ReadM SNP 0053.scaffold00196 111296 1 T G - ReadM SNP 0053.scaffold00196 111369 1 T A - ReadM SNP 0053.scaffold00196 111373 1 C G - ReadM SNP 0053.scaffold00196 111405 1 T C - ReadM SNP 0053.scaffold00196 111518 1 T C - ReadM SNP 0053.scaffold00196 111831 1 C T - ReadM SNP 0053.scaffold00196 111859 1 T C - ReadM SNP 0053.scaffold00196 111868 1 C T - ReadM SNP 0053.scaffold00196 112063 1 T C - ReadM SNP 0053.scaffold00196 112070 1 A G - ReadM SNP 0053.scaffold00196 112188 1 A T - ReadM SNP 0053.scaffold00196 112207 1 A G - ReadM SNP 0053.scaffold00196 112274 1 C T - ReadM SNP 0053.scaffold00196 112380 1 G A - ReadM SNP 0053.scaffold00196 112389 1 G A - ReadM SNP 0053.scaffold00196 112393 1 G A - ReadM SNP 0053.scaffold00196 112522 1 C T - ReadM SNP 0053.scaffold00196 112572 1 C T - ReadM SNP 0053.scaffold00196 112583 1 T G - ReadM SNP 0053.scaffold00196 112605 1 C A - ReadM SNP 0053.scaffold00196 112656 1 A C - Both SNP 0053.scaffold00196 113316 1 G T scaffold575 Both SNP 0053.scaffold00196 113342 1 T C scaffold575 ScafM SNP 0053.scaffold00196 113389 1 T A scaffold575 ScafM INDEL 0053.scaffold00196 113391 1 . C scaffold575 ScafM INDEL 0053.scaffold00196 113397 1 . C scaffold575 ScafM SNP 0053.scaffold00196 113435 1 T C scaffold575 ScafM SNP 0053.scaffold00196 113437 1 G C scaffold575 ScafM SNP 0053.scaffold00196 113461 1 T C scaffold575 ScafM SNP 0053.scaffold00196 113491 1 T A scaffold575 ScafM SNP 0053.scaffold00196 113513 1 T C scaffold575 ScafM INDEL 0053.scaffold00196 113515 10 .......... CTCTCTCTCT scaffold575 ScafM SNP 0053.scaffold00196 113536 1 T C scaffold575 ScafM SNP 0053.scaffold00196 113551 1 T C scaffold575 Both SNP 0053.scaffold00196 113637 1 T C scaffold575 ReadM SNP 0053.scaffold00196 113719 1 C T - ReadM SNP 0053.scaffold00196 113781 1 G T - ReadM INDEL 0053.scaffold00196 113932 1 T . - ReadM SNP 0053.scaffold00196 113958 1 A G - Both SNP 0053.scaffold00196 114046 1 T C scaffold575 Both SNP 0053.scaffold00196 114099 1 G T scaffold575 Both SNP 0053.scaffold00196 114142 1 T C scaffold575 ReadM SNP 0053.scaffold00196 114306 1 A G - ReadM SNP 0053.scaffold00196 114319 1 C T - Both INDEL 0053.scaffold00196 114379 1 C . scaffold575 ReadM SNP 0053.scaffold00196 114453 1 A G - ReadM SNP 0053.scaffold00196 114547 1 A G - ReadM SNP 0053.scaffold00196 114575 1 C T - ReadM SNP 0053.scaffold00196 114599 1 A T - ReadM SNP 0053.scaffold00196 114624 1 T C - ReadM SNP 0053.scaffold00196 114688 1 T C - ReadM SNP 0053.scaffold00196 114750 1 T G - ReadM SNP 0053.scaffold00196 114883 1 A C - ReadM SNP 0053.scaffold00196 114942 1 C A - ReadM SNP 0053.scaffold00196 114947 1 G C - ReadM SNP 0053.scaffold00196 114990 1 G A - ReadM SNP 0053.scaffold00196 115012 1 G A - ReadM SNP 0053.scaffold00196 115044 1 A G - ReadM SNP 0053.scaffold00196 115127 1 G A - ReadM SNP 0053.scaffold00196 115134 1 T A - ReadM SNP 0053.scaffold00196 115247 1 T C - ReadM SNP 0053.scaffold00196 115302 1 T C - ReadM SNP 0053.scaffold00196 115376 1 T A - ReadM SNP 0053.scaffold00196 115533 1 C T - ReadM SNP 0053.scaffold00196 115599 1 T A - ReadM SNP 0053.scaffold00196 116219 1 C A - ReadM SNP 0053.scaffold00196 116256 1 A T - ReadM SNP 0053.scaffold00196 116300 1 T C - ReadM INDEL 0053.scaffold00196 116379 1 . T - ScafM SNP 0053.scaffold00196 117461 1 C A scaffold9811 ScafM SNP 0053.scaffold00196 117490 1 G T scaffold9811 ScafM SNP 0053.scaffold00196 117494 1 G A scaffold9811 ScafM SNP 0053.scaffold00196 117537 1 T C scaffold9811 ScafM SNP 0053.scaffold00196 117549 1 G T scaffold9811 ScafM SNP 0053.scaffold00196 117561 1 G A scaffold9811 ScafM SNP 0053.scaffold00196 117566 1 G C scaffold9811 ScafM SNP 0053.scaffold00196 117576 1 C T scaffold9811 ScafM SNP 0053.scaffold00196 117611 1 G A scaffold9811 ScafM SNP 0053.scaffold00196 117622 1 A G scaffold9811 ScafM SNP 0053.scaffold00196 117648 1 A G scaffold9811 ScafM SNP 0053.scaffold00196 117660 1 C A scaffold9811 ScafM SNP 0053.scaffold00196 117667 1 G A scaffold9811 ScafM SNP 0053.scaffold00196 117711 1 C G scaffold5129 ScafM SNP 0053.scaffold00196 117718 1 T G scaffold5129 ScafM SNP 0053.scaffold00196 117733 1 G A scaffold5129 ScafM SNP 0053.scaffold00196 117744 1 A G scaffold5129 ScafM INDEL 0053.scaffold00196 117752 1 C . scaffold5129 ScafM SNP 0053.scaffold00196 117754 1 A T scaffold5129 ScafM SNP 0053.scaffold00196 117769 2 AT TA scaffold5129 ScafM SNP 0053.scaffold00196 117857 1 T A scaffold5129 ScafM SNP 0053.scaffold00196 117905 1 A G scaffold5129 ScafM SNP 0053.scaffold00196 117948 1 C T scaffold5129 ScafM SNP 0053.scaffold00196 117967 1 A T scaffold5129 ScafM SNP 0053.scaffold00196 117973 1 G A scaffold5129 ScafM SNP 0053.scaffold00196 118008 1 G A scaffold5129 ScafM SNP 0053.scaffold00196 118014 1 C T scaffold5129 ScafM SNP 0053.scaffold00196 118032 1 A T scaffold5129 ScafM SNP 0053.scaffold00196 118049 1 T G scaffold5129 ScafM SNP 0053.scaffold00196 118051 1 T A scaffold5129 ScafM SNP 0053.scaffold00196 118058 1 T A scaffold5129 ScafM SNP 0053.scaffold00196 118061 1 C T scaffold5129 ReadM SNP 0053.scaffold00196 118786 1 G A - ReadM SNP 0053.scaffold00196 118868 1 A C - ReadM SNP 0053.scaffold00196 118891 1 G A - ReadM SNP 0053.scaffold00196 119096 1 C G - ReadM SNP 0053.scaffold00196 119117 1 C T - ReadM SNP 0053.scaffold00196 119153 1 G A - ReadM SNP 0053.scaffold00196 119302 1 G A - ReadM SNP 0053.scaffold00196 119350 1 T G - ReadM SNP 0053.scaffold00196 119354 1 G A - ReadM SNP 0053.scaffold00196 119471 1 T A - ReadM SNP 0053.scaffold00196 119494 1 G A - ReadM SNP 0053.scaffold00196 119515 1 T G - ReadM SNP 0053.scaffold00196 119685 1 G A - ReadM SNP 0053.scaffold00196 119821 1 G A - ReadM SNP 0053.scaffold00196 119836 1 A G - ReadM SNP 0053.scaffold00196 119938 1 G A - ReadM SNP 0053.scaffold00196 119961 1 C A - ReadM SNP 0053.scaffold00196 119971 1 A C - ReadM SNP 0053.scaffold00196 120045 1 T G - ReadM SNP 0053.scaffold00196 120059 1 T C - ReadM SNP 0053.scaffold00196 120087 1 T C - ReadM SNP 0053.scaffold00196 120366 1 T A - ReadM SNP 0053.scaffold00196 120543 1 G C - ReadM SNP 0053.scaffold00196 120633 1 A T - ReadM SNP 0053.scaffold00196 120865 1 C A - ReadM SNP 0053.scaffold00196 120889 1 C T - ReadM SNP 0053.scaffold00196 121062 1 T C - ReadM SNP 0053.scaffold00196 121064 1 A G - ReadM SNP 0053.scaffold00196 121121 1 T G - ReadM SNP 0053.scaffold00196 121140 1 T C - ReadM SNP 0053.scaffold00196 121197 1 G A - ReadM SNP 0053.scaffold00196 121255 1 T C - ReadM SNP 0053.scaffold00196 121351 1 A C - ReadM SNP 0053.scaffold00196 121356 1 T C - ReadM SNP 0053.scaffold00196 121501 1 T A - ReadM SNP 0053.scaffold00196 121528 1 A G - ReadM SNP 0053.scaffold00196 121627 1 A C - ReadM SNP 0053.scaffold00196 121637 1 A G - ReadM SNP 0053.scaffold00196 121694 1 T C - ReadM INDEL 0053.scaffold00196 121725 1 G . - ReadM SNP 0053.scaffold00196 121776 1 C T - ReadM SNP 0053.scaffold00196 121816 1 A C - ReadM SNP 0053.scaffold00196 121888 1 A G - ReadM SNP 0053.scaffold00196 121938 1 G A - ReadM SNP 0053.scaffold00196 121989 1 A C - ReadM SNP 0053.scaffold00196 122052 1 A T - ReadM SNP 0053.scaffold00196 122147 1 A G - ReadM SNP 0053.scaffold00196 122273 1 A G - ReadM SNP 0053.scaffold00196 122316 1 C T - ReadM SNP 0053.scaffold00196 122325 1 T A - ReadM INDEL 0053.scaffold00196 122359 1 C . - ReadM SNP 0053.scaffold00196 122450 1 A G - ReadM SNP 0053.scaffold00196 122477 1 C A - ReadM SNP 0053.scaffold00196 122492 1 A G - ReadM SNP 0053.scaffold00196 122656 1 A G - ReadM SNP 0053.scaffold00196 122721 1 A G - ReadM SNP 0053.scaffold00196 122937 1 T C - ReadM SNP 0053.scaffold00196 122962 1 A G - ReadM SNP 0053.scaffold00196 123027 1 G A - ReadM SNP 0053.scaffold00196 123051 1 G T - ReadM INDEL 0053.scaffold00196 123200 1 . T - ReadM SNP 0053.scaffold00196 123264 1 A C - ReadM SNP 0053.scaffold00196 123286 1 T A - ReadM SNP 0053.scaffold00196 123335 1 T C - ReadM SNP 0053.scaffold00196 123361 1 G A - ReadM SNP 0053.scaffold00196 123444 1 C G - ReadM SNP 0053.scaffold00196 123453 1 G A - ReadM SNP 0053.scaffold00196 123862 1 A G - ScafM SNP 0053.scaffold00196 124045 1 G A scaffold575 ReadM INDEL 0053.scaffold00196 124230 1 . T - ReadM SNP 0053.scaffold00196 124254 1 T C - ScafM SNP 0053.scaffold00196 124337 1 T C scaffold575 ReadM SNP 0053.scaffold00196 125619 1 T A - ReadM SNP 0053.scaffold00196 125686 1 C G - ReadM SNP 0053.scaffold00196 125740 2 CC TG - ReadM SNP 0053.scaffold00196 125748 1 C T - ReadM SNP 0053.scaffold00196 125807 1 C T - ReadM SNP 0053.scaffold00196 126111 1 A G - ReadM SNP 0053.scaffold00196 126121 1 G A - ReadM SNP 0053.scaffold00196 126219 1 A T - ReadM SNP 0053.scaffold00196 126249 1 A G - ReadM SNP 0053.scaffold00196 126259 1 A T - ReadM SNP 0053.scaffold00196 126287 1 T C - ReadM SNP 0053.scaffold00196 126399 1 G A - ReadM SNP 0053.scaffold00196 126412 1 G A - ReadM SNP 0053.scaffold00196 126499 1 G C - ReadM SNP 0053.scaffold00196 126676 1 C G - ReadM SNP 0053.scaffold00196 126688 1 A C - ReadM SNP 0053.scaffold00196 126717 1 C A - ReadM SNP 0053.scaffold00196 126860 1 T C - ReadM SNP 0053.scaffold00196 126936 1 A G - ReadM SNP 0053.scaffold00196 126961 1 G C - ReadM SNP 0053.scaffold00196 126965 1 T G - Both SNP 0053.scaffold00196 127039 1 A G scaffold575 ScafM INDEL 0053.scaffold00196 127043 1 . G scaffold575 ReadM SNP 0053.scaffold00196 127065 1 T G - ReadM INDEL 0053.scaffold00196 127088 1 . A - ScafM SNP 0053.scaffold00196 127124 1 G C scaffold575 ScafM SNP 0053.scaffold00196 127133 1 A G scaffold575 ScafM INDEL 0053.scaffold00196 127134 2 .. GT scaffold575 Both SNP 0053.scaffold00196 127210 1 G T scaffold575 ScafM INDEL 0053.scaffold00196 127243 15 TGACCGTTGCTACCA ............... scaffold575 Both SNP 0053.scaffold00196 127326 1 A G scaffold575 Both SNP 0053.scaffold00196 127351 1 G T scaffold575 Both SNP 0053.scaffold00196 127365 1 T C scaffold575 ReadM SNP 0053.scaffold00196 127500 1 C T - ReadM SNP 0053.scaffold00196 127530 1 C T - ReadM SNP 0053.scaffold00196 127568 1 T G - ReadM SNP 0053.scaffold00196 127596 1 A G - ReadM SNP 0053.scaffold00196 127708 1 T C - ReadM SNP 0053.scaffold00196 127841 1 T C - ReadM SNP 0053.scaffold00196 127875 1 T C - ReadM SNP 0053.scaffold00196 127934 1 T G - ReadM SNP 0053.scaffold00196 127970 1 A C - ReadM SNP 0053.scaffold00196 128064 1 T G - ReadM SNP 0053.scaffold00196 128076 1 C A - ReadM SNP 0053.scaffold00196 128113 1 A G - ReadM SNP 0053.scaffold00196 128575 1 A G - ReadM SNP 0053.scaffold00196 128937 1 C T - ReadM SNP 0053.scaffold00196 129074 1 G A - ReadM SNP 0053.scaffold00196 129096 1 C T - Both SNP 0053.scaffold00196 129134 1 A G scaffold575 ScafM SNP 0053.scaffold00196 129198 1 T C scaffold575 ScafM SNP 0053.scaffold00196 129248 2 AC GA scaffold575 ScafM SNP 0053.scaffold00196 129257 1 T C scaffold575 ReadM SNP 0053.scaffold00196 129322 1 A C - ReadM SNP 0053.scaffold00196 129366 1 T C - ReadM SNP 0053.scaffold00196 129395 1 C T - ReadM SNP 0053.scaffold00196 129488 1 A G - ReadM SNP 0053.scaffold00196 129549 1 T C - ReadM SNP 0053.scaffold00196 129629 1 C T - ReadM SNP 0053.scaffold00196 129717 1 T G - ReadM SNP 0053.scaffold00196 129812 1 C A - ReadM SNP 0053.scaffold00196 129840 1 A G - ReadM SNP 0053.scaffold00196 130153 1 T C - ReadM INDEL 0053.scaffold00196 130265 1 . A - ScafM INDEL 0053.scaffold00196 130398 8 TAAATTTT ........ scaffold575 ScafM SNP 0053.scaffold00196 130432 1 C T scaffold575 ScafM SNP 0053.scaffold00196 130447 1 T C scaffold575 Both SNP 0053.scaffold00196 130558 1 C A scaffold575 Both SNP 0053.scaffold00196 130581 1 G A scaffold575 ScafM SNP 0053.scaffold00196 130615 1 G C scaffold575 ScafM SNP 0053.scaffold00196 130632 1 A G scaffold575 ScafM SNP 0053.scaffold00196 130688 1 T G scaffold575 ScafM SNP 0053.scaffold00196 130690 1 A G scaffold575 ScafM SNP 0053.scaffold00196 130695 1 A G scaffold575 Both SNP 0053.scaffold00196 130852 1 C G scaffold575 ScafM INDEL 0053.scaffold00196 130905 1 . A scaffold575 Both SNP 0053.scaffold00196 130920 1 G C scaffold575 Both SNP 0053.scaffold00196 130972 1 A T scaffold575 Both SNP 0053.scaffold00196 131020 1 C A scaffold575 Both SNP 0053.scaffold00196 131074 1 C T scaffold575 Both SNP 0053.scaffold00196 131108 1 T A scaffold575 Both SNP 0053.scaffold00196 131150 1 C T scaffold575 Both SNP 0053.scaffold00196 131220 1 A G scaffold575 Both SNP 0053.scaffold00196 131240 1 G C scaffold575 ScafM SNP 0053.scaffold00196 131283 1 T C scaffold575 ScafM SNP 0053.scaffold00196 131285 1 G T scaffold575 ScafM SNP 0053.scaffold00196 131304 1 C T scaffold575 ScafM SNP 0053.scaffold00196 131322 1 G A scaffold575 Both SNP 0053.scaffold00196 131360 1 A T scaffold575 Both SNP 0053.scaffold00196 131376 1 G A scaffold575 Both SNP 0053.scaffold00196 131515 1 G A scaffold575 Both SNP 0053.scaffold00196 131536 1 T G scaffold575 Both SNP 0053.scaffold00196 131543 1 C A scaffold575 Both SNP 0053.scaffold00196 131566 1 C T scaffold575 Both SNP 0053.scaffold00196 131683 1 T C scaffold575 Both SNP 0053.scaffold00196 131699 1 G A scaffold575 Both SNP 0053.scaffold00196 131730 1 G A scaffold575 Both SNP 0053.scaffold00196 131745 1 T A scaffold575 Both SNP 0053.scaffold00196 131754 1 C T scaffold575 Both SNP 0053.scaffold00196 131885 1 G A scaffold575 ReadM SNP 0053.scaffold00196 131999 1 A T - Both SNP 0053.scaffold00196 132109 1 A C scaffold575 Both SNP 0053.scaffold00196 132192 1 C T scaffold575 ScafM SNP 0053.scaffold00196 132320 1 C T scaffold575 ScafM SNP 0053.scaffold00196 132322 1 A G scaffold575 ScafM SNP 0053.scaffold00196 132328 1 C T scaffold575 ScafM SNP 0053.scaffold00196 132338 1 A C scaffold575 Both SNP 0053.scaffold00196 132376 1 C T scaffold575 Both SNP 0053.scaffold00196 132577 1 A G scaffold575 ReadM SNP 0053.scaffold00196 132613 1 G A - ReadM INDEL 0053.scaffold00196 132677 1 . T - ReadM SNP 0053.scaffold00196 132959 1 A C - ReadM SNP 0053.scaffold00196 133053 1 G A - ReadM SNP 0053.scaffold00196 133065 1 G C - ReadM SNP 0053.scaffold00196 133228 1 G A - ReadM SNP 0053.scaffold00196 133278 1 A G - ReadM SNP 0053.scaffold00196 133307 1 C A - ReadM SNP 0053.scaffold00196 133614 1 T C - ReadM SNP 0053.scaffold00196 133729 1 A C - ReadM SNP 0053.scaffold00196 133827 1 T G - ReadM SNP 0053.scaffold00196 133863 1 C G - ReadM SNP 0053.scaffold00196 133912 1 T C - ReadM SNP 0053.scaffold00196 133974 1 T C - ScafM SNP 0053.scaffold00196 136408 1 A C scaffold575 ScafM INDEL 0053.scaffold00196 136437 3 ... TAT scaffold575 ScafM SNP 0053.scaffold00196 136438 1 C A scaffold575 ScafM SNP 0053.scaffold00196 136510 1 T C scaffold575 ScafM SNP 0053.scaffold00196 136607 1 T G scaffold575 ScafM SNP 0053.scaffold00196 136631 1 C G scaffold575 ScafM SNP 0053.scaffold00196 136647 1 G T scaffold575 ScafM SNP 0053.scaffold00196 136671 1 G A scaffold575 ScafM SNP 0053.scaffold00196 136690 1 T C scaffold575 Both SNP 0053.scaffold00196 136719 1 C T scaffold575 Both SNP 0053.scaffold00196 136882 1 G A scaffold575 ScafM INDEL 0053.scaffold00196 137431 1 A . scaffold3536 ScafM SNP 0053.scaffold00196 137440 2 CT TG scaffold3536 ScafM SNP 0053.scaffold00196 137449 1 C T scaffold3536 ScafM SNP 0053.scaffold00196 137452 1 C T scaffold3536 ScafM SNP 0053.scaffold00196 137457 1 A T scaffold3536 ScafM SNP 0053.scaffold00196 137472 1 C T scaffold3536 ScafM SNP 0053.scaffold00196 137474 1 T C scaffold3536 ScafM SNP 0053.scaffold00196 137476 2 GA AG scaffold3536 ScafM SNP 0053.scaffold00196 137482 1 T C scaffold3536 ScafM SNP 0053.scaffold00196 137501 1 C T scaffold3536 ScafM SNP 0053.scaffold00196 137511 1 A G scaffold3536 ScafM SNP 0053.scaffold00196 137529 1 A T scaffold3536 ScafM SNP 0053.scaffold00196 137533 1 T C scaffold3536 ScafM SNP 0053.scaffold00196 137541 1 T C scaffold3536 ScafM SNP 0053.scaffold00196 137543 1 G C scaffold3536 ScafM INDEL 0053.scaffold00196 137546 1 . C scaffold3536 ScafM SNP 0053.scaffold00196 137563 1 C A scaffold3536 ScafM INDEL 0053.scaffold00196 137566 2 AT .. scaffold3536 ScafM INDEL 0053.scaffold00196 137569 1 G . scaffold3536 ScafM SNP 0053.scaffold00196 137576 1 A G scaffold3536 ScafM INDEL 0053.scaffold00196 137583 8 ........ CAACTCAA scaffold3536 ScafM SNP 0053.scaffold00196 137591 1 C T scaffold3536 ScafM SNP 0053.scaffold00196 137596 1 G A scaffold3536 ScafM SNP 0053.scaffold00196 137634 1 A G scaffold3536 ScafM SNP 0053.scaffold00196 137640 1 A C scaffold3536 ReadM SNP 0053.scaffold00196 138046 1 A T - ReadM SNP 0053.scaffold00196 138053 1 G A - ReadM SNP 0053.scaffold00196 138097 1 G A - ReadM SNP 0053.scaffold00196 138205 1 G A - ReadM SNP 0053.scaffold00196 138226 1 T A - ScafM INDEL 0053.scaffold00196 138338 5 ..... AATTT scaffold7505 ScafM INDEL 0053.scaffold00196 138387 1 A . scaffold7505 Both SNP 0053.scaffold00196 138439 1 T C scaffold7505 Both SNP 0053.scaffold00196 138483 1 T C scaffold7505 Both SNP 0053.scaffold00196 138487 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 138542 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 138547 1 T A scaffold7505 ScafM SNP 0053.scaffold00196 138584 1 T C scaffold7505 Both SNP 0053.scaffold00196 138633 1 T A scaffold7505 Both SNP 0053.scaffold00196 138635 1 G C scaffold7505 ScafM INDEL 0053.scaffold00196 138820 2 .. TT scaffold7505 Both SNP 0053.scaffold00196 138897 1 G T scaffold7505 ScafM SNP 0053.scaffold00196 139018 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 139035 1 G A scaffold7505 ScafM INDEL 0053.scaffold00196 139068 1 A . scaffold7505 ScafM SNP 0053.scaffold00196 139095 1 A C scaffold7505 ScafM INDEL 0053.scaffold00196 139131 7 AGTATTG ....... scaffold7505 ScafM INDEL 0053.scaffold00196 139148 3 CTC ... scaffold7505 ScafM SNP 0053.scaffold00196 139227 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 139245 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 140153 1 C A scaffold7505 ReadM SNP 0053.scaffold00196 140321 1 A G - ReadM SNP 0053.scaffold00196 140336 1 G A - ScafM SNP 0053.scaffold00196 140569 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 140586 1 T A scaffold7505 ScafM SNP 0053.scaffold00196 140615 1 G T scaffold7505 ScafM SNP 0053.scaffold00196 140636 1 G A scaffold7505 Both SNP 0053.scaffold00196 140659 1 A G scaffold7505 Both SNP 0053.scaffold00196 140789 1 G T scaffold7505 Both SNP 0053.scaffold00196 140808 1 A G scaffold7505 Both SNP 0053.scaffold00196 140894 1 C G scaffold7505 ReadM SNP 0053.scaffold00196 140928 1 G A - ReadM SNP 0053.scaffold00196 141014 1 G T - ReadM SNP 0053.scaffold00196 141040 1 C G - ReadM SNP 0053.scaffold00196 141056 1 G T - ReadM SNP 0053.scaffold00196 141063 1 A G - Both SNP 0053.scaffold00196 141240 1 C T scaffold7505 Both SNP 0053.scaffold00196 141401 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 141434 1 G T scaffold7505 ScafM SNP 0053.scaffold00196 141462 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 141480 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 141483 1 C G scaffold7505 ScafM SNP 0053.scaffold00196 141520 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 141558 1 C G scaffold7505 ScafM INDEL 0053.scaffold00196 141584 1 A . scaffold7505 ScafM SNP 0053.scaffold00196 141600 1 G C scaffold7505 ScafM SNP 0053.scaffold00196 141630 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 141638 1 C T scaffold7505 Both SNP 0053.scaffold00196 141679 1 C A scaffold7505 Both SNP 0053.scaffold00196 141694 1 C G scaffold7505 Both SNP 0053.scaffold00196 141812 1 C T scaffold7505 Both SNP 0053.scaffold00196 141877 1 G A scaffold7505 Both SNP 0053.scaffold00196 141886 1 G A scaffold7505 ReadM INDEL 0053.scaffold00196 141995 1 . C - ReadM SNP 0053.scaffold00196 142055 1 G C - ReadM SNP 0053.scaffold00196 142286 1 G T - ReadM SNP 0053.scaffold00196 143236 1 A G - ReadM SNP 0053.scaffold00196 146322 1 A G - ReadM SNP 0053.scaffold00196 146782 1 T C - ReadM SNP 0053.scaffold00196 146825 1 T A - ReadM SNP 0053.scaffold00196 146902 1 C T - ReadM SNP 0053.scaffold00196 146972 1 A G - ReadM INDEL 0053.scaffold00196 147047 1 T . - ReadM SNP 0053.scaffold00196 147061 1 T C - ReadM SNP 0053.scaffold00196 147087 1 A G - ReadM SNP 0053.scaffold00196 147147 1 T C - ReadM SNP 0053.scaffold00196 147969 1 T C - ReadM SNP 0053.scaffold00196 148009 1 A G - ReadM SNP 0053.scaffold00196 148019 1 G C - ReadM SNP 0053.scaffold00196 148084 1 G T - ReadM SNP 0053.scaffold00196 148152 1 A G - ReadM SNP 0053.scaffold00196 148171 1 T G - ReadM SNP 0053.scaffold00196 148567 1 C T - ReadM SNP 0053.scaffold00196 148871 1 G A - ReadM SNP 0053.scaffold00196 149035 1 T C - ReadM SNP 0053.scaffold00196 149040 1 A C - ReadM SNP 0053.scaffold00196 149046 1 C T - ReadM SNP 0053.scaffold00196 149112 1 G A - ReadM SNP 0053.scaffold00196 149151 1 C T - ReadM SNP 0053.scaffold00196 149169 1 T C - ReadM SNP 0053.scaffold00196 149214 1 G C - ReadM SNP 0053.scaffold00196 149968 1 C G - ReadM SNP 0053.scaffold00196 149971 1 C T - ReadM SNP 0053.scaffold00196 149976 1 A G - ReadM SNP 0053.scaffold00196 150055 1 A G - ReadM SNP 0053.scaffold00196 150076 1 G T - ReadM SNP 0053.scaffold00196 150271 1 C T - ReadM SNP 0053.scaffold00196 150311 1 G A - ReadM SNP 0053.scaffold00196 150332 1 C T - ReadM SNP 0053.scaffold00196 150493 1 C T - ReadM SNP 0053.scaffold00196 150529 1 C G - ReadM SNP 0053.scaffold00196 150681 1 A C - ReadM SNP 0053.scaffold00196 150700 1 A G - ReadM SNP 0053.scaffold00196 150704 1 A G - ReadM SNP 0053.scaffold00196 151092 1 A G - ReadM SNP 0053.scaffold00196 151162 1 T C - ReadM SNP 0053.scaffold00196 151257 1 A C - ReadM SNP 0053.scaffold00196 151300 1 A C - ReadM SNP 0053.scaffold00196 151319 1 A G - ReadM SNP 0053.scaffold00196 151330 1 T C - ReadM SNP 0053.scaffold00196 151477 1 A C - ReadM SNP 0053.scaffold00196 151555 1 A C - ReadM SNP 0053.scaffold00196 151594 1 A C - ReadM SNP 0053.scaffold00196 151667 1 C T - ReadM SNP 0053.scaffold00196 151707 1 T C - ReadM SNP 0053.scaffold00196 151761 1 G A - ReadM SNP 0053.scaffold00196 151802 1 G A - ReadM SNP 0053.scaffold00196 151807 1 G A - ReadM SNP 0053.scaffold00196 152042 1 A G - ReadM SNP 0053.scaffold00196 152056 1 A G - ReadM SNP 0053.scaffold00196 152083 1 A T - ReadM SNP 0053.scaffold00196 152176 1 C A - ReadM SNP 0053.scaffold00196 152182 1 T C - ReadM SNP 0053.scaffold00196 152248 1 T C - ReadM SNP 0053.scaffold00196 152262 1 C G - ReadM SNP 0053.scaffold00196 152301 1 C T - ReadM SNP 0053.scaffold00196 152310 1 C T - ReadM SNP 0053.scaffold00196 152350 1 T A - ReadM SNP 0053.scaffold00196 152443 1 C T - ReadM SNP 0053.scaffold00196 152892 1 T C - ReadM SNP 0053.scaffold00196 153206 1 G T - ReadM SNP 0053.scaffold00196 153231 1 T C - ReadM SNP 0053.scaffold00196 153250 1 T A - ReadM SNP 0053.scaffold00196 153296 1 T C - ReadM SNP 0053.scaffold00196 153310 1 T G - ReadM SNP 0053.scaffold00196 153348 1 G C - ReadM SNP 0053.scaffold00196 153415 1 G A - ReadM SNP 0053.scaffold00196 153437 1 T A - ReadM SNP 0053.scaffold00196 153592 1 A G - ReadM INDEL 0053.scaffold00196 153692 1 G . - ReadM SNP 0053.scaffold00196 153704 1 T C - ReadM SNP 0053.scaffold00196 153766 1 A G - ReadM SNP 0053.scaffold00196 153816 1 C A - ReadM SNP 0053.scaffold00196 153876 1 T C - Both SNP 0053.scaffold00196 153929 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 153958 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 153967 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 153979 1 T A scaffold7505 ScafM SNP 0053.scaffold00196 153997 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 154022 1 G C scaffold7505 ScafM SNP 0053.scaffold00196 154027 1 C G scaffold7505 ScafM SNP 0053.scaffold00196 154044 1 C T scaffold7505 Both SNP 0053.scaffold00196 154087 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 154135 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 154147 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 154149 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 154158 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 154175 1 G C scaffold7505 ScafM SNP 0053.scaffold00196 154187 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 154194 2 AC GT scaffold7505 Both SNP 0053.scaffold00196 154302 1 A G scaffold7505 ReadM SNP 0053.scaffold00196 154325 1 T C - ReadM SNP 0053.scaffold00196 154346 1 C T - ReadM SNP 0053.scaffold00196 154448 1 A G - ScafM SNP 0053.scaffold00196 154667 1 G A scaffold7505 Both SNP 0053.scaffold00196 154683 1 A C scaffold7505 Both SNP 0053.scaffold00196 154691 1 T C scaffold7505 Both SNP 0053.scaffold00196 154720 1 T C scaffold7505 Both SNP 0053.scaffold00196 154788 1 A T scaffold7505 ReadM SNP 0053.scaffold00196 154811 1 G T - ReadM SNP 0053.scaffold00196 154869 1 C T - ReadM SNP 0053.scaffold00196 154873 1 T A - ReadM SNP 0053.scaffold00196 154936 1 T C - ReadM SNP 0053.scaffold00196 154984 1 C A - ReadM SNP 0053.scaffold00196 155056 1 T G - ReadM SNP 0053.scaffold00196 155188 1 A G - ReadM SNP 0053.scaffold00196 155328 1 T A - ReadM SNP 0053.scaffold00196 155336 1 C T - ReadM SNP 0053.scaffold00196 155423 1 A G - ReadM SNP 0053.scaffold00196 155435 1 G T - ReadM SNP 0053.scaffold00196 155490 1 A G - ReadM SNP 0053.scaffold00196 155520 1 T G - ReadM SNP 0053.scaffold00196 155539 1 C A - ReadM SNP 0053.scaffold00196 155656 1 C T - ReadM SNP 0053.scaffold00196 155948 1 T C - ReadM SNP 0053.scaffold00196 156017 1 C T - ReadM SNP 0053.scaffold00196 156219 1 A G - ReadM SNP 0053.scaffold00196 156242 1 A G - ReadM SNP 0053.scaffold00196 156335 1 C T - ReadM SNP 0053.scaffold00196 156343 1 T C - ReadM SNP 0053.scaffold00196 156347 1 C A - ReadM SNP 0053.scaffold00196 156662 1 G A - ReadM SNP 0053.scaffold00196 156715 1 G A - ReadM SNP 0053.scaffold00196 156751 1 A G - ReadM SNP 0053.scaffold00196 156760 1 T C - ReadM SNP 0053.scaffold00196 157034 1 A G - ReadM SNP 0053.scaffold00196 157115 1 A G - ReadM SNP 0053.scaffold00196 157119 1 G C - ReadM SNP 0053.scaffold00196 157181 1 A G - ReadM SNP 0053.scaffold00196 157195 1 A G - ReadM SNP 0053.scaffold00196 157368 1 G A - ReadM SNP 0053.scaffold00196 157392 1 T G - ReadM SNP 0053.scaffold00196 157699 1 G C - ReadM SNP 0053.scaffold00196 157702 1 A G - ReadM SNP 0053.scaffold00196 157845 1 T G - ReadM SNP 0053.scaffold00196 157887 1 T A - ReadM SNP 0053.scaffold00196 157925 1 G A - ReadM SNP 0053.scaffold00196 157940 1 A G - ReadM SNP 0053.scaffold00196 158022 1 C A - ReadM SNP 0053.scaffold00196 158029 1 G A - ReadM SNP 0053.scaffold00196 158139 1 G T - ReadM SNP 0053.scaffold00196 158156 1 A T - ReadM SNP 0053.scaffold00196 158356 1 C T - ScafM SNP 0053.scaffold00196 158588 1 T G scaffold7505 ScafM INDEL 0053.scaffold00196 158594 4 .... TAAG scaffold7505 Both SNP 0053.scaffold00196 158744 1 A T scaffold7505 Both SNP 0053.scaffold00196 158794 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 158851 1 G C scaffold7505 ScafM SNP 0053.scaffold00196 158868 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 158873 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 158890 1 G T scaffold7505 Both SNP 0053.scaffold00196 158935 1 C G scaffold7505 Both SNP 0053.scaffold00196 159057 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 159071 1 C T scaffold7505 Both SNP 0053.scaffold00196 159097 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 159139 1 G C scaffold7505 ScafM SNP 0053.scaffold00196 159164 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 159204 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 159236 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 159285 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 160800 1 G T scaffold7505 ScafM SNP 0053.scaffold00196 160802 2 AA TT scaffold7505 ScafM INDEL 0053.scaffold00196 160810 3 AAT ... scaffold7505 ScafM INDEL 0053.scaffold00196 160816 1 A . scaffold7505 ScafM SNP 0053.scaffold00196 160893 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 160960 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 161037 1 T A scaffold7505 ScafM INDEL 0053.scaffold00196 161053 6 CTATCT ...... scaffold7505 ScafM SNP 0053.scaffold00196 161084 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 161096 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 161123 2 TG CC scaffold7505 Both SNP 0053.scaffold00196 161253 1 A G scaffold7505 Both SNP 0053.scaffold00196 161262 1 G T scaffold7505 Both SNP 0053.scaffold00196 161339 1 G T scaffold7505 Both SNP 0053.scaffold00196 161384 1 A G scaffold7505 Both INDEL 0053.scaffold00196 161402 1 . A scaffold7505 Both SNP 0053.scaffold00196 161417 1 C T scaffold7505 ReadM SNP 0053.scaffold00196 161508 1 G A - ReadM SNP 0053.scaffold00196 161515 1 G A - ReadM SNP 0053.scaffold00196 161543 1 T A - ReadM SNP 0053.scaffold00196 161555 1 T A - ReadM INDEL 0053.scaffold00196 161621 1 . C - ReadM SNP 0053.scaffold00196 161790 1 T C - ReadM SNP 0053.scaffold00196 161895 1 T C - ReadM SNP 0053.scaffold00196 161905 1 A C - ReadM SNP 0053.scaffold00196 161922 1 T C - ReadM SNP 0053.scaffold00196 161948 1 T C - ReadM SNP 0053.scaffold00196 162019 2 AA GC - ReadM SNP 0053.scaffold00196 162039 1 G T - ReadM SNP 0053.scaffold00196 162151 1 A C - ReadM SNP 0053.scaffold00196 162166 1 A G - ReadM SNP 0053.scaffold00196 162199 1 C T - ReadM SNP 0053.scaffold00196 162207 1 A G - ReadM SNP 0053.scaffold00196 162297 1 G A - ReadM SNP 0053.scaffold00196 162338 1 G A - ReadM SNP 0053.scaffold00196 162389 1 A G - ReadM SNP 0053.scaffold00196 162401 1 G T - ReadM SNP 0053.scaffold00196 162459 1 A C - ReadM SNP 0053.scaffold00196 162485 1 T C - ReadM SNP 0053.scaffold00196 162487 1 T C - ReadM SNP 0053.scaffold00196 162589 1 A G - ReadM SNP 0053.scaffold00196 162637 1 C T - ReadM SNP 0053.scaffold00196 162730 1 T G - ReadM SNP 0053.scaffold00196 162760 1 A G - ReadM INDEL 0053.scaffold00196 162807 1 T . - ReadM INDEL 0053.scaffold00196 163011 1 . T - ReadM SNP 0053.scaffold00196 163023 1 T G - ReadM SNP 0053.scaffold00196 163046 1 T A - ReadM SNP 0053.scaffold00196 163134 1 A G - ReadM SNP 0053.scaffold00196 163143 1 G A - ReadM SNP 0053.scaffold00196 163558 1 C T - ReadM SNP 0053.scaffold00196 163609 1 C T - ReadM SNP 0053.scaffold00196 163661 1 T A - ReadM SNP 0053.scaffold00196 163785 1 G A - ReadM SNP 0053.scaffold00196 163833 1 A C - ReadM SNP 0053.scaffold00196 163858 1 T C - ReadM SNP 0053.scaffold00196 163987 1 T C - ReadM INDEL 0053.scaffold00196 164035 1 T . - ReadM SNP 0053.scaffold00196 164047 1 G A - ReadM SNP 0053.scaffold00196 164286 1 G A - ReadM SNP 0053.scaffold00196 164383 1 A T - ReadM SNP 0053.scaffold00196 164465 1 A C - ReadM SNP 0053.scaffold00196 164516 1 T A - ReadM SNP 0053.scaffold00196 164584 1 G A - ReadM SNP 0053.scaffold00196 164783 1 T A - ReadM SNP 0053.scaffold00196 164814 1 C T - ReadM SNP 0053.scaffold00196 164917 1 A G - ReadM SNP 0053.scaffold00196 164929 1 G A - ReadM SNP 0053.scaffold00196 164981 1 T C - ReadM SNP 0053.scaffold00196 165254 1 A T - ReadM SNP 0053.scaffold00196 165257 1 C T - ReadM SNP 0053.scaffold00196 165307 1 G A - ReadM SNP 0053.scaffold00196 165323 1 A T - ReadM SNP 0053.scaffold00196 165437 1 C T - ReadM SNP 0053.scaffold00196 165441 1 C T - ReadM SNP 0053.scaffold00196 165483 1 A C - Both SNP 0053.scaffold00196 165714 1 C A scaffold7505 Both SNP 0053.scaffold00196 165722 1 T C scaffold7505 Both SNP 0053.scaffold00196 165769 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 165804 1 T G scaffold7505 ScafM SNP 0053.scaffold00196 165825 1 G T scaffold7505 ScafM INDEL 0053.scaffold00196 165832 1 A . scaffold7505 ScafM SNP 0053.scaffold00196 165841 1 C G scaffold7505 Both SNP 0053.scaffold00196 165922 1 T A scaffold7505 Both SNP 0053.scaffold00196 165951 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 165986 2 AC GT scaffold7505 Both SNP 0053.scaffold00196 166014 1 G C scaffold7505 Both SNP 0053.scaffold00196 166043 1 C T scaffold7505 Both SNP 0053.scaffold00196 166114 1 G A scaffold7505 Both SNP 0053.scaffold00196 166153 1 T C scaffold7505 Both SNP 0053.scaffold00196 166174 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 166272 1 T C scaffold7505 Both SNP 0053.scaffold00196 166332 1 C T scaffold7505 Both SNP 0053.scaffold00196 166355 1 G A scaffold7505 Both SNP 0053.scaffold00196 166406 1 A G scaffold7505 ReadM INDEL 0053.scaffold00196 166467 1 C . - ReadM INDEL 0053.scaffold00196 166600 1 A . - Both SNP 0053.scaffold00196 166675 1 T C scaffold7505 Both SNP 0053.scaffold00196 166678 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 166699 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 166702 1 A T scaffold7505 Both SNP 0053.scaffold00196 166739 1 G A scaffold7505 Both SNP 0053.scaffold00196 166882 1 T C scaffold7505 Both SNP 0053.scaffold00196 166941 1 C A scaffold7505 Both SNP 0053.scaffold00196 166946 1 A G scaffold7505 Both SNP 0053.scaffold00196 166974 1 A G scaffold7505 Both SNP 0053.scaffold00196 167079 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 167123 2 AA GT scaffold7505 ScafM SNP 0053.scaffold00196 167141 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 167180 1 A T scaffold7505 ScafM INDEL 0053.scaffold00196 167185 3 GAG ... scaffold7505 Both SNP 0053.scaffold00196 167210 1 C G scaffold7505 Both SNP 0053.scaffold00196 167248 1 A T scaffold7505 ReadM SNP 0053.scaffold00196 167293 1 T C - ReadM SNP 0053.scaffold00196 167397 1 G C - ReadM SNP 0053.scaffold00196 167403 2 AA TT - ReadM SNP 0053.scaffold00196 167527 1 A G - ReadM INDEL 0053.scaffold00196 167642 1 T . - ReadM SNP 0053.scaffold00196 167710 1 A G - ReadM SNP 0053.scaffold00196 167844 1 T G - ReadM SNP 0053.scaffold00196 167865 1 C A - ReadM SNP 0053.scaffold00196 167879 1 T A - ReadM SNP 0053.scaffold00196 167927 1 A T - ReadM INDEL 0053.scaffold00196 168244 1 . T - ReadM SNP 0053.scaffold00196 168300 1 G A - ReadM SNP 0053.scaffold00196 168313 1 T G - ReadM SNP 0053.scaffold00196 168317 1 T A - ReadM SNP 0053.scaffold00196 168385 1 A T - ReadM SNP 0053.scaffold00196 168412 1 A C - Both SNP 0053.scaffold00196 168450 1 T C scaffold7505 Both SNP 0053.scaffold00196 168465 1 A G scaffold7505 Both SNP 0053.scaffold00196 168467 1 C T scaffold7505 Both SNP 0053.scaffold00196 168544 1 C T scaffold7505 Both SNP 0053.scaffold00196 168609 1 C T scaffold7505 Both SNP 0053.scaffold00196 168625 1 G A scaffold7505 Both SNP 0053.scaffold00196 168645 1 C G scaffold7505 Both SNP 0053.scaffold00196 168856 1 T C scaffold7505 Both SNP 0053.scaffold00196 168945 1 G A scaffold7505 Both SNP 0053.scaffold00196 168951 1 T A scaffold7505 Both SNP 0053.scaffold00196 168960 1 A G scaffold7505 Both SNP 0053.scaffold00196 169002 1 A G scaffold7505 Both INDEL 0053.scaffold00196 169060 1 . T scaffold7505 Both SNP 0053.scaffold00196 169193 1 C T scaffold7505 Both SNP 0053.scaffold00196 169249 1 G T scaffold7505 Both SNP 0053.scaffold00196 169282 1 C T scaffold7505 Both SNP 0053.scaffold00196 169288 1 C G scaffold7505 Both SNP 0053.scaffold00196 169312 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 169371 1 A G scaffold7505 Both SNP 0053.scaffold00196 169417 1 C T scaffold7505 Both SNP 0053.scaffold00196 169489 1 A G scaffold7505 Both SNP 0053.scaffold00196 169523 1 G A scaffold7505 Both SNP 0053.scaffold00196 169612 1 T C scaffold7505 Both SNP 0053.scaffold00196 169617 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 169634 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 169639 1 A G scaffold7505 ScafM INDEL 0053.scaffold00196 169651 1 C . scaffold7505 ScafM SNP 0053.scaffold00196 169658 1 C T scaffold7505 Both SNP 0053.scaffold00196 169677 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 169728 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 169737 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 169771 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 169774 1 A G scaffold7505 ScafM SNP 0053.scaffold00196 169783 2 AA CG scaffold7505 ScafM SNP 0053.scaffold00196 169790 1 A G scaffold7505 ReadM SNP 0053.scaffold00196 169890 1 A G - ReadM SNP 0053.scaffold00196 169976 1 A T - ReadM SNP 0053.scaffold00196 170002 1 T C - ReadM SNP 0053.scaffold00196 170034 1 G C - ReadM SNP 0053.scaffold00196 170070 1 C T - ReadM SNP 0053.scaffold00196 170340 1 G A - ReadM SNP 0053.scaffold00196 170398 1 C A - ReadM SNP 0053.scaffold00196 170489 1 C T - ReadM SNP 0053.scaffold00196 170495 1 G A - ReadM SNP 0053.scaffold00196 170522 1 C T - ReadM SNP 0053.scaffold00196 170559 1 G T - ReadM SNP 0053.scaffold00196 171074 1 T C - ReadM SNP 0053.scaffold00196 171076 1 G A - ReadM SNP 0053.scaffold00196 171152 1 C T - Both SNP 0053.scaffold00196 171222 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 171315 2 GT CC scaffold7505 ScafM SNP 0053.scaffold00196 171358 1 G A scaffold7505 Both SNP 0053.scaffold00196 171381 1 A C scaffold7505 Both SNP 0053.scaffold00196 171434 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 171517 2 TC CG scaffold7505 ReadM SNP 0053.scaffold00196 171531 1 G A - ReadM SNP 0053.scaffold00196 171560 1 A T - ReadM SNP 0053.scaffold00196 171610 1 T C - ReadM SNP 0053.scaffold00196 171635 1 T A - ReadM SNP 0053.scaffold00196 171683 1 G A - ReadM SNP 0053.scaffold00196 171703 1 T G - ReadM SNP 0053.scaffold00196 171758 1 C T - ReadM INDEL 0053.scaffold00196 171765 1 . C - Both SNP 0053.scaffold00196 171825 1 C A scaffold7505 ReadM SNP 0053.scaffold00196 171879 1 A G - ReadM INDEL 0053.scaffold00196 171884 1 . T - ReadM SNP 0053.scaffold00196 171958 1 T C - ReadM SNP 0053.scaffold00196 171989 1 G A - ReadM SNP 0053.scaffold00196 172035 1 C T - ReadM SNP 0053.scaffold00196 172037 1 A G - Both SNP 0053.scaffold00196 172071 1 C T scaffold7505 Both SNP 0053.scaffold00196 172187 1 A C scaffold7505 Both SNP 0053.scaffold00196 172291 1 G T scaffold7505 Both INDEL 0053.scaffold00196 172331 1 C . scaffold7505 Both SNP 0053.scaffold00196 172342 1 C T scaffold7505 ScafM INDEL 0053.scaffold00196 172402 5 ..... TATAT scaffold7505 ScafM SNP 0053.scaffold00196 172415 1 A G scaffold7505 Both SNP 0053.scaffold00196 172436 1 A G scaffold7505 Both SNP 0053.scaffold00196 172536 1 G C scaffold7505 Both SNP 0053.scaffold00196 172582 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 172614 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 172619 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 172623 1 T G scaffold7505 ScafM SNP 0053.scaffold00196 172761 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 172772 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 172777 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 172790 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 172815 2 CA TT scaffold7505 ScafM SNP 0053.scaffold00196 172861 1 T A scaffold7505 Both SNP 0053.scaffold00196 172927 1 G C scaffold7505 Both SNP 0053.scaffold00196 172934 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 173073 1 T C scaffold7505 Both SNP 0053.scaffold00196 173083 1 G A scaffold7505 Both SNP 0053.scaffold00196 173112 1 A T scaffold7505 Both SNP 0053.scaffold00196 173161 1 A C scaffold7505 Both SNP 0053.scaffold00196 173220 1 T C scaffold7505 Both SNP 0053.scaffold00196 173230 1 T C scaffold7505 Both INDEL 0053.scaffold00196 173267 1 . T scaffold7505 Both SNP 0053.scaffold00196 173277 1 C T scaffold7505 ReadM SNP 0053.scaffold00196 173322 1 T G - ReadM SNP 0053.scaffold00196 173411 1 C G - ReadM SNP 0053.scaffold00196 173415 1 T A - ReadM SNP 0053.scaffold00196 173478 1 G C - ReadM SNP 0053.scaffold00196 173559 1 A T - ReadM SNP 0053.scaffold00196 173593 1 C T - ReadM SNP 0053.scaffold00196 173698 1 C T - ReadM SNP 0053.scaffold00196 173774 1 A T - ReadM SNP 0053.scaffold00196 173840 1 A C - ReadM SNP 0053.scaffold00196 173987 1 C T - ReadM SNP 0053.scaffold00196 173995 1 G C - ReadM SNP 0053.scaffold00196 174036 1 C T - ReadM SNP 0053.scaffold00196 174049 1 A G - ReadM SNP 0053.scaffold00196 174096 1 A G - ReadM SNP 0053.scaffold00196 174234 1 G T - ReadM SNP 0053.scaffold00196 174306 1 C T - ReadM SNP 0053.scaffold00196 174379 1 T G - ReadM SNP 0053.scaffold00196 174496 1 A C - ReadM SNP 0053.scaffold00196 174626 1 G A - ReadM SNP 0053.scaffold00196 174630 1 A G - ReadM SNP 0053.scaffold00196 174843 1 A T - ReadM SNP 0053.scaffold00196 174995 1 C T - ReadM SNP 0053.scaffold00196 175018 1 T A - ReadM SNP 0053.scaffold00196 175159 1 G T - ReadM SNP 0053.scaffold00196 175230 1 A G - ReadM SNP 0053.scaffold00196 175301 1 T C - ReadM SNP 0053.scaffold00196 175441 1 C A - ReadM SNP 0053.scaffold00196 175466 1 G A - ReadM SNP 0053.scaffold00196 175478 1 C T - ReadM SNP 0053.scaffold00196 175543 1 A G - ReadM SNP 0053.scaffold00196 175549 1 C A - ReadM SNP 0053.scaffold00196 175796 1 T A - ReadM SNP 0053.scaffold00196 175806 1 G A - ReadM SNP 0053.scaffold00196 175821 1 A T - ReadM SNP 0053.scaffold00196 176046 1 C G - ReadM SNP 0053.scaffold00196 176067 1 C G - ReadM SNP 0053.scaffold00196 176133 1 A C - Both SNP 0053.scaffold00196 176394 1 C A scaffold7505 Both SNP 0053.scaffold00196 176418 1 C A scaffold7505 Both SNP 0053.scaffold00196 176443 1 T G scaffold7505 ScafM INDEL 0053.scaffold00196 176471 1 . T scaffold7505 ScafM SNP 0053.scaffold00196 176473 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 176491 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 176493 1 A G scaffold7505 ReadM SNP 0053.scaffold00196 176592 1 G T - ReadM SNP 0053.scaffold00196 176599 1 G T - ReadM SNP 0053.scaffold00196 176611 1 A C - ReadM SNP 0053.scaffold00196 176715 1 C T - ReadM SNP 0053.scaffold00196 176721 1 A C - ReadM SNP 0053.scaffold00196 176755 1 T C - ReadM SNP 0053.scaffold00196 176963 1 C T - ReadM SNP 0053.scaffold00196 176969 1 G A - ReadM SNP 0053.scaffold00196 177002 1 A G - ReadM SNP 0053.scaffold00196 177039 1 C T - Both SNP 0053.scaffold00196 177083 1 G C scaffold7505 Both SNP 0053.scaffold00196 177177 1 G T scaffold7505 Both SNP 0053.scaffold00196 177255 1 C A scaffold7505 Both SNP 0053.scaffold00196 177327 1 C T scaffold7505 Both SNP 0053.scaffold00196 177434 1 T G scaffold7505 Both SNP 0053.scaffold00196 177436 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 177516 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 177521 1 T A scaffold7505 ScafM SNP 0053.scaffold00196 177533 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 177545 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 177550 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 177566 1 G T scaffold7505 ScafM INDEL 0053.scaffold00196 177591 2 .A TT scaffold7505 ReadM SNP 0053.scaffold00196 177808 1 T A - ReadM SNP 0053.scaffold00196 177831 1 C T - ReadM SNP 0053.scaffold00196 177862 1 T G - ReadM SNP 0053.scaffold00196 177907 1 T C - ReadM SNP 0053.scaffold00196 177964 1 T C - ReadM SNP 0053.scaffold00196 177982 1 G A - Both SNP 0053.scaffold00196 178110 1 T A scaffold7505 Both SNP 0053.scaffold00196 178132 1 A G scaffold7505 ReadM SNP 0053.scaffold00196 178224 1 T A - ReadM SNP 0053.scaffold00196 178295 1 C A - ReadM SNP 0053.scaffold00196 178311 1 A G - ReadM SNP 0053.scaffold00196 178373 1 T C - ReadM SNP 0053.scaffold00196 178376 1 A G - ReadM SNP 0053.scaffold00196 178431 1 C T - ReadM SNP 0053.scaffold00196 178577 1 A C - ReadM SNP 0053.scaffold00196 178579 1 A G - ReadM SNP 0053.scaffold00196 178682 1 G A - ReadM SNP 0053.scaffold00196 178732 1 T A - ReadM SNP 0053.scaffold00196 178767 1 C T - ReadM SNP 0053.scaffold00196 179068 1 G A - ReadM SNP 0053.scaffold00196 179100 1 C A - ReadM SNP 0053.scaffold00196 179102 1 G A - ReadM SNP 0053.scaffold00196 179160 1 T G - ReadM SNP 0053.scaffold00196 179227 1 G A - ReadM SNP 0053.scaffold00196 179317 1 A G - ReadM SNP 0053.scaffold00196 179368 1 T C - ReadM SNP 0053.scaffold00196 179504 1 C T - ReadM SNP 0053.scaffold00196 179568 1 T C - ReadM SNP 0053.scaffold00196 179634 1 C A - ReadM SNP 0053.scaffold00196 179732 1 A G - ReadM SNP 0053.scaffold00196 179796 1 T G - Both SNP 0053.scaffold00196 179961 1 T G scaffold7505 Both SNP 0053.scaffold00196 179971 1 G A scaffold7505 Both SNP 0053.scaffold00196 180084 1 G A scaffold7505 Both SNP 0053.scaffold00196 180096 1 T C scaffold7505 ReadM SNP 0053.scaffold00196 180177 1 G A - ReadM INDEL 0053.scaffold00196 180244 1 . A - ReadM SNP 0053.scaffold00196 180317 1 A G - ReadM SNP 0053.scaffold00196 180372 1 T A - Both SNP 0053.scaffold00196 180403 1 T C scaffold7505 ScafM INDEL 0053.scaffold00196 180525 1 . T scaffold7505 ScafM SNP 0053.scaffold00196 180527 1 C T scaffold7505 Both INDEL 0053.scaffold00196 180551 1 . C scaffold7505 ReadM SNP 0053.scaffold00196 180615 1 T A - ReadM SNP 0053.scaffold00196 180631 1 A G - ReadM SNP 0053.scaffold00196 180723 1 C T - ReadM SNP 0053.scaffold00196 180768 1 T A - ReadM SNP 0053.scaffold00196 180802 1 C T - ReadM SNP 0053.scaffold00196 180913 1 T G - ReadM SNP 0053.scaffold00196 180920 1 A C - ReadM SNP 0053.scaffold00196 180923 1 G T - ReadM SNP 0053.scaffold00196 181065 1 T C - ReadM SNP 0053.scaffold00196 181116 1 G A - ReadM SNP 0053.scaffold00196 181760 1 C T - ReadM SNP 0053.scaffold00196 181786 1 A G - ReadM SNP 0053.scaffold00196 181791 1 C T - ReadM SNP 0053.scaffold00196 181909 1 T C - ReadM SNP 0053.scaffold00196 181952 1 C T - ReadM SNP 0053.scaffold00196 182263 1 C G - ReadM SNP 0053.scaffold00196 182275 1 G A - ScafM SNP 0053.scaffold00196 183550 1 G A scaffold7505 Both SNP 0053.scaffold00196 183723 1 C T scaffold7505 Both SNP 0053.scaffold00196 183773 1 G A scaffold7505 Both SNP 0053.scaffold00196 184013 1 C A scaffold7505 Both SNP 0053.scaffold00196 184015 1 T A scaffold7505 ScafM SNP 0053.scaffold00196 184059 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 184074 1 A G scaffold7505 Both SNP 0053.scaffold00196 184133 1 A G scaffold7505 Both SNP 0053.scaffold00196 184138 1 C T scaffold7505 Both SNP 0053.scaffold00196 184193 1 T C scaffold7505 Both SNP 0053.scaffold00196 184222 1 A G scaffold7505 ScafM INDEL 0053.scaffold00196 184327 2 TT .C scaffold7505 ScafM SNP 0053.scaffold00196 184354 1 G A scaffold7505 Both SNP 0053.scaffold00196 184396 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 184431 1 T C scaffold7505 ScafM SNP 0053.scaffold00196 184451 1 T C scaffold7505 ScafM INDEL 0053.scaffold00196 184474 1 A . scaffold7505 ScafM SNP 0053.scaffold00196 184496 1 C G scaffold7505 ReadM SNP 0053.scaffold00196 184640 1 G A - Both SNP 0053.scaffold00196 184701 1 T G scaffold7505 Both SNP 0053.scaffold00196 184729 1 T G scaffold7505 Both SNP 0053.scaffold00196 184789 1 A G scaffold7505 Both SNP 0053.scaffold00196 184806 1 T G scaffold7505 ReadM SNP 0053.scaffold00196 184872 1 C T - ReadM SNP 0053.scaffold00196 184952 1 C A - ReadM SNP 0053.scaffold00196 184991 1 T A - ReadM SNP 0053.scaffold00196 185012 1 A C - ReadM SNP 0053.scaffold00196 185020 1 G A - ReadM SNP 0053.scaffold00196 185095 1 T C - ReadM SNP 0053.scaffold00196 185122 1 A C - ReadM SNP 0053.scaffold00196 185124 1 G T - ReadM INDEL 0053.scaffold00196 185163 1 . A - ScafM SNP 0053.scaffold00196 185354 1 T C scaffold7505 ScafM INDEL 0053.scaffold00196 185382 19 ................... AAATAATGCATCCAACACT scaffold7505 ScafM SNP 0053.scaffold00196 185413 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 185436 1 A C scaffold7505 ScafM SNP 0053.scaffold00196 185530 1 G A scaffold7505 ScafM SNP 0053.scaffold00196 185534 2 AC CT scaffold7505 ScafM SNP 0053.scaffold00196 185553 1 C A scaffold7505 ScafM SNP 0053.scaffold00196 185581 1 C G scaffold7505 ScafM SNP 0053.scaffold00196 185612 1 C T scaffold7505 ScafM SNP 0053.scaffold00196 185655 1 C G scaffold7505 ReadM SNP 0053.scaffold00196 185902 1 A T - ReadM SNP 0053.scaffold00196 186060 1 G T - ReadM SNP 0053.scaffold00196 186145 1 C A - ReadM SNP 0053.scaffold00196 186215 1 A G - ReadM SNP 0053.scaffold00196 186317 1 A C - ReadM SNP 0053.scaffold00196 186342 1 C A - ReadM SNP 0053.scaffold00196 186375 1 G A - ReadM SNP 0053.scaffold00196 186421 1 A C - ReadM SNP 0053.scaffold00196 186492 1 G A - ReadM SNP 0053.scaffold00196 186503 1 G A - ReadM SNP 0053.scaffold00196 186538 1 T C - ReadM SNP 0053.scaffold00196 186579 1 C T - ReadM SNP 0053.scaffold00196 186602 1 A C - ReadM SNP 0053.scaffold00196 186621 1 G A - ReadM SNP 0053.scaffold00196 186651 1 A T - ReadM SNP 0053.scaffold00196 186671 1 G A - ReadM SNP 0053.scaffold00196 186777 1 A G - ReadM SNP 0053.scaffold00196 186809 1 A G - ReadM SNP 0053.scaffold00196 186840 1 C T - ReadM SNP 0053.scaffold00196 186941 1 G A - ReadM SNP 0053.scaffold00196 187005 1 A G - ReadM SNP 0053.scaffold00196 187013 1 T G - ReadM SNP 0053.scaffold00196 187163 1 A G - ReadM SNP 0053.scaffold00196 187251 1 C G - ReadM SNP 0053.scaffold00196 187507 1 A T - ReadM SNP 0053.scaffold00196 187611 1 G A - ScafM SNP 0053.scaffold00196 187748 1 A T scaffold7505 ScafM SNP 0053.scaffold00196 187769 1 C T scaffold7505 Both SNP 0053.scaffold00196 187833 1 C G scaffold7505 Both SNP 0053.scaffold00196 187956 1 G A scaffold7505 Both SNP 0053.scaffold00196 188018 1 A G scaffold7505 Both SNP 0053.scaffold00196 188061 1 G C scaffold7505 Both SNP 0053.scaffold00196 188109 1 A T scaffold7505 Both SNP 0053.scaffold00196 188156 1 C T scaffold7505 ScafM INDEL 0053.scaffold00196 188224 1 . T scaffold7505 ScafM INDEL 0053.scaffold00196 188239 3 TTA ... scaffold7505 ScafM SNP 0053.scaffold00196 188250 1 A G scaffold7505 ScafM INDEL 0053.scaffold00196 188286 3 ... AAC scaffold7505 Both INDEL 0053.scaffold00196 188369 1 . A scaffold7505 ScafM INDEL 0053.scaffold00196 188394 1 T . scaffold7505 Both SNP 0053.scaffold00196 188417 1 G T scaffold7505 Both SNP 0053.scaffold00196 188427 1 G C scaffold7505 Both SNP 0053.scaffold00196 188473 1 A C scaffold7505 Both SNP 0053.scaffold00196 188563 1 A G scaffold7505 ReadM SNP 0053.scaffold00196 188678 1 A G - ScafM SNP 0053.scaffold00196 188745 1 T C scaffold7505 ReadM SNP 0053.scaffold00196 188840 1 T C - ReadM SNP 0053.scaffold00196 188901 1 G A - ReadM SNP 0053.scaffold00196 188904 1 A C - ReadM SNP 0053.scaffold00196 188924 1 A G - ReadM SNP 0053.scaffold00196 189397 1 C T - ReadM SNP 0053.scaffold00196 189406 1 T C - ReadM SNP 0053.scaffold00196 196960 1 A G - ReadM SNP 0053.scaffold00196 196991 1 A T - ReadM SNP 0053.scaffold00196 197017 1 T C - ReadM INDEL 0053.scaffold00196 197121 1 G . - ReadM SNP 0053.scaffold00196 197232 1 C A - ReadM SNP 0053.scaffold00196 212241 1 T C - ReadM SNP 0053.scaffold00196 212297 1 T C - ReadM SNP 0053.scaffold00196 212300 1 T C - ReadM SNP 0053.scaffold00196 212417 1 A C - ReadM SNP 0053.scaffold00196 212446 1 G A - ReadM SNP 0053.scaffold00196 212511 1 A G - ReadM SNP 0053.scaffold00196 212514 1 T C - ReadM SNP 0053.scaffold00196 212552 1 T A - ReadM SNP 0053.scaffold00196 212589 1 T C - ReadM SNP 0053.scaffold00196 212596 1 T C - ReadM SNP 0053.scaffold00196 212882 1 A G - ReadM SNP 0053.scaffold00196 212927 1 A T - ReadM SNP 0053.scaffold00196 212976 1 C T - ReadM SNP 0053.scaffold00196 212978 1 C T - ReadM SNP 0053.scaffold00196 213075 1 T C - ReadM SNP 0053.scaffold00196 213314 1 A G - ReadM SNP 0053.scaffold00196 213445 1 T C - ReadM SNP 0053.scaffold00196 213673 1 A G - ReadM SNP 0053.scaffold00196 213912 1 C A - ReadM SNP 0053.scaffold00196 213934 1 T C - ReadM SNP 0053.scaffold00196 214034 1 G T - ReadM SNP 0053.scaffold00196 214429 1 G C - ReadM SNP 0053.scaffold00196 214446 1 G A - ReadM SNP 0053.scaffold00196 215452 1 A G - ReadM SNP 0053.scaffold00196 215647 1 G A - ReadM SNP 0053.scaffold00196 215676 1 G A - ReadM SNP 0053.scaffold00196 215762 1 C A - ReadM SNP 0053.scaffold00196 215796 1 T G - ReadM SNP 0053.scaffold00196 215892 1 C G - ReadM SNP 0053.scaffold00196 215982 1 T C - ReadM SNP 0053.scaffold00196 216312 1 A G - ReadM SNP 0053.scaffold00196 216447 1 C T - ReadM SNP 0053.scaffold00196 216627 1 C T - ReadM SNP 0053.scaffold00196 216668 1 C T - ReadM SNP 0053.scaffold00196 217223 1 A G - ReadM SNP 0053.scaffold00196 217260 1 G A - ReadM SNP 0053.scaffold00196 217265 1 A C - ReadM SNP 0053.scaffold00196 217439 1 G A - ReadM SNP 0053.scaffold00196 217447 1 G C - ReadM SNP 0053.scaffold00196 217482 1 C T - ReadM INDEL 0053.scaffold00196 217633 1 . G - ReadM SNP 0053.scaffold00196 217662 1 G A - ReadM SNP 0053.scaffold00196 217722 1 C G - ReadM SNP 0053.scaffold00196 217807 1 T C - ReadM SNP 0053.scaffold00196 217868 1 G A - ReadM SNP 0053.scaffold00196 217973 1 A G - ReadM SNP 0053.scaffold00196 218237 1 G C - ReadM SNP 0053.scaffold00196 218333 1 C A - ReadM SNP 0053.scaffold00196 218434 1 A G - ReadM SNP 0053.scaffold00196 218448 1 T C - ReadM SNP 0053.scaffold00196 218475 1 T A - ReadM SNP 0053.scaffold00196 218536 1 T G - ReadM SNP 0053.scaffold00196 218596 1 A G - ReadM SNP 0053.scaffold00196 218609 1 T A - ReadM SNP 0053.scaffold00196 218699 1 T C - ReadM INDEL 0053.scaffold00196 218713 1 G . - ReadM SNP 0053.scaffold00196 218747 1 T C - ReadM SNP 0053.scaffold00196 218790 1 G T - ReadM SNP 0053.scaffold00196 218792 1 C T - ReadM SNP 0053.scaffold00196 218861 1 A G - ReadM SNP 0053.scaffold00196 218924 1 C G - ReadM SNP 0053.scaffold00196 219040 1 T C - ReadM SNP 0053.scaffold00196 219207 1 C A - ReadM SNP 0053.scaffold00196 219284 1 G T - ReadM SNP 0053.scaffold00196 219300 1 T C - ReadM SNP 0053.scaffold00196 219304 1 A G - ReadM SNP 0053.scaffold00196 219320 1 A G - ReadM SNP 0053.scaffold00196 219481 1 A G - ReadM SNP 0053.scaffold00196 219581 1 T C - ReadM SNP 0053.scaffold00196 219619 1 T G - ReadM SNP 0053.scaffold00196 219768 1 A G - ReadM SNP 0053.scaffold00196 219894 1 T C - ReadM SNP 0053.scaffold00196 220046 1 T G - ReadM SNP 0053.scaffold00196 220063 1 C G - ReadM SNP 0053.scaffold00196 220135 1 T A - ReadM SNP 0053.scaffold00196 220160 1 T G - ReadM SNP 0053.scaffold00196 220174 1 G A - ReadM SNP 0053.scaffold00196 220237 1 A C - ReadM SNP 0053.scaffold00196 220249 1 G A - ReadM SNP 0053.scaffold00196 220341 1 C T - ReadM SNP 0053.scaffold00196 220348 1 C A - ReadM SNP 0053.scaffold00196 220604 1 T A - ReadM SNP 0053.scaffold00196 220690 1 C T - ReadM SNP 0053.scaffold00196 220829 1 A G - ReadM INDEL 0053.scaffold00196 220883 1 G . - ReadM SNP 0053.scaffold00196 220909 1 A T - ReadM SNP 0053.scaffold00196 220934 1 A G - ReadM SNP 0053.scaffold00196 220965 1 A G - ReadM SNP 0053.scaffold00196 221019 1 C T - ReadM SNP 0053.scaffold00196 221049 1 A C - ReadM SNP 0053.scaffold00196 221169 1 A T - ReadM SNP 0053.scaffold00196 221178 1 C A - ReadM SNP 0053.scaffold00196 221183 1 C T - ReadM SNP 0053.scaffold00196 221227 1 A C - ReadM INDEL 0053.scaffold00196 221296 1 . C - ReadM SNP 0053.scaffold00196 221342 1 A T - ReadM SNP 0053.scaffold00196 221406 1 A G - ScafM SNP 0053.scaffold00196 221439 1 T A scaffold2384 ScafM SNP 0053.scaffold00196 221454 1 G A scaffold2384 ScafM INDEL 0053.scaffold00196 221495 1 . A scaffold2384 ScafM INDEL 0053.scaffold00196 221497 2 .. AA scaffold2384 ScafM INDEL 0053.scaffold00196 221521 2 .. AA scaffold2384 ScafM SNP 0053.scaffold00196 221523 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 221544 1 T A scaffold2384 ScafM SNP 0053.scaffold00196 221593 1 T A scaffold2384 ScafM SNP 0053.scaffold00196 222692 1 G T scaffold2384 ScafM SNP 0053.scaffold00196 222734 1 T A scaffold2384 ScafM INDEL 0053.scaffold00196 222774 8 ........ AACTTAAG scaffold2384 ScafM SNP 0053.scaffold00196 222817 1 C T scaffold2384 Both SNP 0053.scaffold00196 222916 1 C T scaffold2384 ScafM INDEL 0053.scaffold00196 222965 7 CAAGTAA ....... scaffold2384 ScafM INDEL 0053.scaffold00196 222973 2 GC .. scaffold2384 ScafM SNP 0053.scaffold00196 223141 1 C T scaffold2384 ReadM SNP 0053.scaffold00196 223241 1 C T - ReadM INDEL 0053.scaffold00196 223288 1 A . - ReadM SNP 0053.scaffold00196 223315 1 A C - ReadM SNP 0053.scaffold00196 223630 1 C T - ReadM SNP 0053.scaffold00196 223654 1 C T - ReadM SNP 0053.scaffold00196 223686 1 T C - ReadM SNP 0053.scaffold00196 223745 1 T C - ReadM SNP 0053.scaffold00196 223769 1 T A - ReadM SNP 0053.scaffold00196 223862 1 C A - ReadM SNP 0053.scaffold00196 223903 1 G A - ReadM SNP 0053.scaffold00196 224016 1 C A - ReadM SNP 0053.scaffold00196 224036 1 T C - ReadM SNP 0053.scaffold00196 224238 1 A C - ReadM SNP 0053.scaffold00196 224329 1 T A - ReadM SNP 0053.scaffold00196 224356 1 T A - ReadM SNP 0053.scaffold00196 224384 1 C A - ReadM INDEL 0053.scaffold00196 224405 1 . A - ReadM SNP 0053.scaffold00196 224423 1 G T - ReadM SNP 0053.scaffold00196 224487 1 A C - ReadM SNP 0053.scaffold00196 224497 1 A T - ReadM SNP 0053.scaffold00196 224655 1 G A - ReadM SNP 0053.scaffold00196 224666 1 T A - ReadM SNP 0053.scaffold00196 224729 1 A G - ReadM SNP 0053.scaffold00196 224781 1 C T - ReadM SNP 0053.scaffold00196 224787 1 A C - ReadM SNP 0053.scaffold00196 224810 1 G A - Both SNP 0053.scaffold00196 224890 1 C T scaffold2384 Both SNP 0053.scaffold00196 224893 1 G A scaffold2384 Both SNP 0053.scaffold00196 225011 1 A G scaffold2384 ScafM SNP 0053.scaffold00196 225367 1 C G scaffold2384 ScafM SNP 0053.scaffold00196 225397 1 T A scaffold2384 ScafM SNP 0053.scaffold00196 225423 1 G T scaffold2384 ScafM SNP 0053.scaffold00196 225447 1 C A scaffold2384 Both SNP 0053.scaffold00196 225643 1 G A scaffold2384 Both SNP 0053.scaffold00196 226173 1 C T scaffold2384 Both SNP 0053.scaffold00196 226177 1 G A scaffold2384 Both INDEL 0053.scaffold00196 226182 1 . T scaffold2384 ScafM SNP 0053.scaffold00196 226452 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 226482 1 T A scaffold2384 ReadM SNP 0053.scaffold00196 227076 1 C T - ReadM SNP 0053.scaffold00196 227908 1 A G - ReadM SNP 0053.scaffold00196 228017 1 A G - ReadM SNP 0053.scaffold00196 228031 1 A G - ReadM SNP 0053.scaffold00196 228212 1 C A - ReadM INDEL 0053.scaffold00196 228261 1 . A - ReadM SNP 0053.scaffold00196 228290 1 C T - ReadM SNP 0053.scaffold00196 228386 1 A G - ReadM SNP 0053.scaffold00196 228607 1 C G - ReadM SNP 0053.scaffold00196 228665 1 C A - ReadM SNP 0053.scaffold00196 228699 1 A T - ReadM SNP 0053.scaffold00196 228708 1 A G - ReadM SNP 0053.scaffold00196 228760 1 C T - ReadM SNP 0053.scaffold00196 228794 1 G A - ReadM SNP 0053.scaffold00196 228830 1 A G - ReadM SNP 0053.scaffold00196 228861 1 C T - ScafM SNP 0053.scaffold00196 228950 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 228983 1 G A scaffold2384 ScafM INDEL 0053.scaffold00196 228991 1 . A scaffold2384 Both SNP 0053.scaffold00196 229040 1 A G scaffold2384 ReadM SNP 0053.scaffold00196 229266 1 A G - ScafM SNP 0053.scaffold00196 229409 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 229421 1 T C scaffold2384 ScafM SNP 0053.scaffold00196 229449 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 229452 1 A C scaffold2384 ScafM INDEL 0053.scaffold00196 229472 1 A . scaffold2384 ScafM SNP 0053.scaffold00196 229483 1 T C scaffold2384 Both SNP 0053.scaffold00196 229804 1 A T scaffold2384 Both SNP 0053.scaffold00196 229909 1 A G scaffold2384 Both SNP 0053.scaffold00196 230154 1 T C scaffold2384 Both SNP 0053.scaffold00196 230188 1 T A scaffold2384 Both SNP 0053.scaffold00196 230259 1 A G scaffold2384 Both INDEL 0053.scaffold00196 230293 1 A . scaffold2384 ScafM SNP 0053.scaffold00196 230360 1 T G scaffold2384 ScafM INDEL 0053.scaffold00196 230363 2 .. AA scaffold2384 ScafM SNP 0053.scaffold00196 230367 1 C A scaffold2384 ScafM SNP 0053.scaffold00196 230398 1 T C scaffold2384 ScafM SNP 0053.scaffold00196 230406 1 C T scaffold2384 ScafM SNP 0053.scaffold00196 230543 1 T C scaffold2384 ScafM INDEL 0053.scaffold00196 230582 7 GTTTCCA ....... scaffold2384 Both SNP 0053.scaffold00196 230602 1 T G scaffold2384 Both SNP 0053.scaffold00196 230668 1 A G scaffold2384 Both SNP 0053.scaffold00196 230683 1 A C scaffold2384 Both SNP 0053.scaffold00196 230830 1 T C scaffold2384 Both SNP 0053.scaffold00196 230872 1 T A scaffold2384 Both SNP 0053.scaffold00196 231065 1 C T scaffold2384 Both SNP 0053.scaffold00196 231241 1 C T scaffold2384 Both SNP 0053.scaffold00196 231439 1 T A scaffold2384 Both SNP 0053.scaffold00196 231643 1 G A scaffold2384 Both SNP 0053.scaffold00196 231671 1 T C scaffold2384 Both SNP 0053.scaffold00196 231705 1 A G scaffold2384 ScafM INDEL 0053.scaffold00196 231898 1 . A scaffold2384 Both SNP 0053.scaffold00196 232078 1 T C scaffold2384 Both INDEL 0053.scaffold00196 232246 1 . A scaffold2384 Both SNP 0053.scaffold00196 232300 1 G C scaffold2384 Both SNP 0053.scaffold00196 232477 1 T G scaffold2384 ScafM SNP 0053.scaffold00196 232801 2 TA CG scaffold2384 ScafM INDEL 0053.scaffold00196 232805 3 ... AAT scaffold2384 Both INDEL 0053.scaffold00196 232926 1 . A scaffold2384 Both SNP 0053.scaffold00196 232979 1 T C scaffold2384 ReadM SNP 0053.scaffold00196 233108 1 G A - ScafM INDEL 0053.scaffold00196 233108 52 GAAGTTCACCTACATTGTGATCTAAGAATTTTCCATAGTCTTTTCTTCTAAA .................................................... scaffold2384 ScafM INDEL 0053.scaffold00196 233161 2 GG .. scaffold2384 Both SNP 0053.scaffold00196 233289 1 G A scaffold2384 Both SNP 0053.scaffold00196 233311 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 233320 1 C T scaffold2384 ScafM SNP 0053.scaffold00196 233337 1 T C scaffold2384 Both SNP 0053.scaffold00196 233517 1 G T scaffold2384 Both SNP 0053.scaffold00196 233527 1 C T scaffold2384 Both SNP 0053.scaffold00196 233596 1 T C scaffold2384 Both SNP 0053.scaffold00196 233644 1 A G scaffold2384 ScafM SNP 0053.scaffold00196 233674 1 T G scaffold2384 ScafM SNP 0053.scaffold00196 233753 1 C G scaffold2384 ScafM INDEL 0053.scaffold00196 233778 4 .... CCCC scaffold2384 ScafM SNP 0053.scaffold00196 233779 3 TGG CCC scaffold2384 ScafM SNP 0053.scaffold00196 233784 1 T C scaffold2384 ScafM SNP 0053.scaffold00196 233822 1 T C scaffold2384 ScafM SNP 0053.scaffold00196 233986 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 233999 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 234009 3 TGG ACA scaffold2384 ScafM SNP 0053.scaffold00196 234013 2 GC TG scaffold2384 ScafM SNP 0053.scaffold00196 234016 3 TGC CCA scaffold2384 ScafM SNP 0053.scaffold00196 234020 2 GT AC scaffold2384 ScafM INDEL 0053.scaffold00196 234023 2 .. CT scaffold2384 ScafM INDEL 0053.scaffold00196 234033 7 ....... GTATACA scaffold2384 ScafM INDEL 0053.scaffold00196 234056 7 ....... ACGTAAC scaffold2384 Both SNP 0053.scaffold00196 234146 1 A C scaffold2384 Both SNP 0053.scaffold00196 234217 1 A G scaffold2384 Both SNP 0053.scaffold00196 234224 1 A C scaffold2384 Both SNP 0053.scaffold00196 234346 1 A G scaffold2384 Both SNP 0053.scaffold00196 234406 1 A G scaffold2384 Both SNP 0053.scaffold00196 234480 1 T C scaffold2384 Both INDEL 0053.scaffold00196 234960 1 . G scaffold2384 ScafM SNP 0053.scaffold00196 234998 1 T C scaffold2384 ScafM INDEL 0053.scaffold00196 235020 1 G . scaffold2384 ScafM INDEL 0053.scaffold00196 235025 2 AT .. scaffold2384 ScafM INDEL 0053.scaffold00196 235028 1 A . scaffold2384 ScafM INDEL 0053.scaffold00196 235031 1 G . scaffold2384 ScafM SNP 0053.scaffold00196 235035 2 AC TT scaffold2384 Both SNP 0053.scaffold00196 235128 1 C T scaffold2384 Both SNP 0053.scaffold00196 235155 1 A G scaffold2384 Both SNP 0053.scaffold00196 235161 1 A C scaffold2384 Both SNP 0053.scaffold00196 235287 1 A C scaffold2384 Both SNP 0053.scaffold00196 235596 1 C T scaffold2384 ScafM INDEL 0053.scaffold00196 235689 1 A . scaffold2384 ScafM INDEL 0053.scaffold00196 235829 2 .. AA scaffold2384 ScafM SNP 0053.scaffold00196 235831 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 235839 1 C T scaffold2384 ScafM SNP 0053.scaffold00196 235845 1 T G scaffold2384 ScafM INDEL 0053.scaffold00196 236409 2 AA .. scaffold2384 ReadM INDEL 0053.scaffold00196 236548 1 . A - ScafM INDEL 0053.scaffold00196 236548 2 .G AA scaffold2384 Both SNP 0053.scaffold00196 236727 1 C A scaffold2384 ScafM SNP 0053.scaffold00196 236755 1 G C scaffold2384 ScafM SNP 0053.scaffold00196 236818 1 A G scaffold2384 ScafM SNP 0053.scaffold00196 236905 1 T A scaffold2384 ReadM SNP 0053.scaffold00196 237206 1 G A - Both SNP 0053.scaffold00196 237704 1 C G scaffold2384 Both SNP 0053.scaffold00196 237986 1 T C scaffold2384 Both SNP 0053.scaffold00196 238212 1 G A scaffold2384 ScafM SNP 0053.scaffold00196 238255 1 T A scaffold2384 ScafM INDEL 0053.scaffold00196 239467 1 . A scaffold2384 ScafM SNP 0053.scaffold00196 239501 1 G A scaffold2384 ReadM SNP 0053.scaffold00196 240122 1 A G - ReadM SNP 0053.scaffold00196 240167 1 G A - ReadM SNP 0053.scaffold00196 240280 1 C T - ReadM SNP 0053.scaffold00196 240537 1 A G - ReadM SNP 0053.scaffold00196 240553 1 G C - ReadM SNP 0053.scaffold00196 240560 1 G A - ReadM SNP 0053.scaffold00196 240966 1 T C - ReadM SNP 0053.scaffold00196 241026 1 C T - Both SNP 0053.scaffold00196 241179 1 T C scaffold2384 ScafM INDEL 0053.scaffold00196 241189 2 GT .. scaffold2384 Both SNP 0053.scaffold00196 241228 1 A G scaffold2384 Both SNP 0053.scaffold00196 241256 1 C T scaffold2384 Both SNP 0053.scaffold00196 241268 1 C T scaffold2384 Both SNP 0053.scaffold00196 241334 1 C T scaffold2384 Both SNP 0053.scaffold00196 241359 1 A C scaffold2384 ReadM SNP 0053.scaffold00196 241423 1 T A - ReadM SNP 0053.scaffold00196 241504 1 C A - ReadM SNP 0053.scaffold00196 241511 1 A G - ReadM SNP 0053.scaffold00196 241729 1 C T - ReadM SNP 0053.scaffold00196 241737 1 T C - ReadM SNP 0053.scaffold00196 241792 1 C A - ReadM SNP 0053.scaffold00196 242041 1 C T - ReadM SNP 0053.scaffold00196 242119 1 G A - ReadM SNP 0053.scaffold00196 242137 1 A G - ReadM SNP 0053.scaffold00196 242176 1 C T - ReadM SNP 0053.scaffold00196 242199 1 C T - ReadM SNP 0053.scaffold00196 242255 1 T C - ScafM SNP 0053.scaffold00196 243088 1 G A scaffold21889 ScafM SNP 0053.scaffold00196 243098 1 A G scaffold21889 ScafM INDEL 0053.scaffold00196 243130 1 . A scaffold21889 ReadM SNP 0053.scaffold00196 245083 1 A G - ReadM SNP 0053.scaffold00196 245103 1 C T - ReadM SNP 0053.scaffold00196 245157 1 A G - ReadM SNP 0053.scaffold00196 245191 1 C T - ScafM INDEL 0053.scaffold00196 248075 1 A . scaffold3713 ScafM SNP 0053.scaffold00196 248095 1 G A scaffold3713 ScafM SNP 0053.scaffold00196 248129 1 G C scaffold3713 Both SNP 0053.scaffold00196 248172 1 T C scaffold3713 Both SNP 0053.scaffold00196 248187 2 TG AA scaffold3713 Both SNP 0053.scaffold00196 248337 1 A G scaffold3713 Both SNP 0053.scaffold00196 248339 1 T C scaffold3713 ScafM INDEL 0053.scaffold00196 248548 3 TTG ... scaffold3713 Both SNP 0053.scaffold00196 248566 1 C T scaffold3713 Both SNP 0053.scaffold00196 248663 1 T G scaffold3713 Both SNP 0053.scaffold00196 248785 1 T C scaffold3713 ScafM SNP 0053.scaffold00196 248813 1 C T scaffold3713 ScafM INDEL 0053.scaffold00196 248861 4 TCTC .... scaffold3713 Both SNP 0053.scaffold00196 248920 1 T C scaffold3713 Both SNP 0053.scaffold00196 248973 1 T C scaffold3713 Both SNP 0053.scaffold00196 249010 1 T G scaffold3713 ScafM SNP 0053.scaffold00196 249068 2 TC CT scaffold3713 ScafM INDEL 0053.scaffold00196 249143 1 A . scaffold3713 ScafM SNP 0053.scaffold00196 249160 1 C A scaffold3713 ScafM INDEL 0053.scaffold00196 249170 3 ... CTT scaffold3713 ScafM INDEL 0053.scaffold00196 249171 1 . G scaffold3713 ScafM INDEL 0053.scaffold00196 249172 2 .. TT scaffold3713 ScafM SNP 0053.scaffold00196 249305 2 AA GG scaffold3713 Both SNP 0053.scaffold00196 249405 1 G A scaffold3713 ReadM SNP 0053.scaffold00196 249535 1 C T - ReadM SNP 0053.scaffold00196 249878 1 A T - ReadM SNP 0053.scaffold00196 249887 1 C A - ReadM SNP 0053.scaffold00196 249990 1 A G - ScafM INDEL 0053.scaffold00196 250097 26 .......................... AAACAGATGCACTTATATGATATTGT scaffold3713 Both SNP 0053.scaffold00196 250124 1 T G scaffold3713 Both SNP 0053.scaffold00196 250155 1 A T scaffold3713 Both SNP 0053.scaffold00196 250380 1 T A scaffold3713 ScafM SNP 0053.scaffold00196 250466 1 A G scaffold3713 Both SNP 0053.scaffold00196 250617 1 T C scaffold3713 Both SNP 0053.scaffold00196 250838 1 C T scaffold3713 Both SNP 0053.scaffold00196 250875 1 G A scaffold3713 Both INDEL 0053.scaffold00196 251245 3 AAT ... scaffold3713 Both SNP 0053.scaffold00196 251523 1 G A scaffold3713 ScafM INDEL 0053.scaffold00196 251610 35 ................................... GTCCCCTCAAAAAAAAAAAAAGTTTGCTTCACCAT scaffold3713 ScafM SNP 0053.scaffold00196 251707 1 T C scaffold3713 ScafM SNP 0053.scaffold00196 251836 1 A G scaffold3713 ScafM SNP 0053.scaffold00196 251856 1 T C scaffold3713 ScafM SNP 0053.scaffold00196 251904 1 T C scaffold3713 Both SNP 0053.scaffold00196 251951 1 T C scaffold3713 Both SNP 0053.scaffold00196 252044 1 T A scaffold3713 Both SNP 0053.scaffold00196 252073 1 C A scaffold3713 Both SNP 0053.scaffold00196 252333 1 A G scaffold3713 Both SNP 0053.scaffold00196 252398 1 G A scaffold3713 ScafM SNP 0053.scaffold00196 252787 1 C T scaffold3713 ScafM SNP 0053.scaffold00196 253004 1 G A scaffold16919 ScafM SNP 0053.scaffold00196 253045 1 T C scaffold16919 ScafM SNP 0053.scaffold00196 253069 1 A C scaffold16919 ScafM INDEL 0053.scaffold00196 254657 1 A . scaffold16919 ReadM SNP 0053.scaffold00196 255027 1 C T - ReadM SNP 0053.scaffold00196 255188 1 G T - ReadM SNP 0053.scaffold00196 255286 1 T C - ReadM SNP 0053.scaffold00196 255318 1 G T - ScafM SNP 0053.scaffold00196 257429 1 A G scaffold3713 ScafM SNP 0053.scaffold00196 257731 1 C T scaffold3713 ScafM SNP 0053.scaffold00196 257736 1 G A scaffold3713 ScafM INDEL 0053.scaffold00196 257758 6 TTGGCT ...... scaffold3713 ReadM SNP 0053.scaffold00196 257835 1 G T - ReadM SNP 0053.scaffold00196 257912 1 G T - ReadM SNP 0053.scaffold00196 257937 1 C T - ReadM SNP 0053.scaffold00196 257951 1 C T - Both SNP 0053.scaffold00196 258093 1 T C scaffold3713 ReadM SNP 0053.scaffold00196 258200 1 C T - Both SNP 0053.scaffold00196 258388 1 A G scaffold3713 Both SNP 0053.scaffold00196 258450 1 A G scaffold3713 ScafM SNP 0053.scaffold00196 258457 1 C T scaffold3713 ScafM SNP 0053.scaffold00196 261589 1 C T scaffold3713 ScafM SNP 0053.scaffold00196 261622 1 G A scaffold3713 ScafM SNP 0053.scaffold00196 261635 1 A C scaffold3713 Both SNP 0053.scaffold00196 261849 1 A G scaffold3713 Both SNP 0053.scaffold00196 261898 1 T C scaffold3713 Both SNP 0053.scaffold00196 261902 1 A G scaffold3713 Both SNP 0053.scaffold00196 261974 1 T C scaffold3713 Both SNP 0053.scaffold00196 261991 1 G A scaffold3713 Both SNP 0053.scaffold00196 262022 1 A C scaffold3713 ReadM SNP 0053.scaffold00196 262315 1 A T - ReadM SNP 0053.scaffold00196 262427 1 A G - ReadM SNP 0053.scaffold00196 263495 1 G C - ReadM SNP 0053.scaffold00196 263523 1 T C - ReadM SNP 0053.scaffold00196 263647 1 G T - ReadM SNP 0053.scaffold00196 263692 1 G A - ReadM SNP 0053.scaffold00196 263800 1 C A - ReadM SNP 0053.scaffold00196 263855 1 G T - ReadM INDEL 0053.scaffold00196 264188 1 A . - ReadM SNP 0053.scaffold00196 264337 1 T G - ReadM SNP 0053.scaffold00196 264357 1 T C - ReadM SNP 0053.scaffold00196 264429 1 G A - ReadM SNP 0053.scaffold00196 264630 1 A G - ReadM SNP 0053.scaffold00196 264673 1 G A - ReadM SNP 0053.scaffold00196 264772 1 C T - ReadM SNP 0053.scaffold00196 264792 1 A G - ReadM SNP 0053.scaffold00196 265524 1 C T - ReadM SNP 0053.scaffold00196 265538 1 C T - ReadM SNP 0053.scaffold00196 265723 1 C T - ReadM SNP 0053.scaffold00196 265741 1 C T - ReadM SNP 0053.scaffold00196 265816 1 T C - ReadM SNP 0053.scaffold00196 265825 1 C G - ReadM SNP 0053.scaffold00196 265887 1 A G - ReadM SNP 0053.scaffold00196 265935 1 A G - ReadM SNP 0053.scaffold00196 266015 1 A T - ReadM SNP 0053.scaffold00196 266238 1 T C - ReadM SNP 0053.scaffold00196 266330 1 G T - ReadM SNP 0053.scaffold00196 266487 1 T C - ReadM SNP 0053.scaffold00196 266637 1 A G - ReadM INDEL 0053.scaffold00196 266676 1 . C - ReadM SNP 0053.scaffold00196 266917 1 A T - ReadM SNP 0053.scaffold00196 266920 1 A G - ReadM SNP 0053.scaffold00196 267205 1 G A - ReadM SNP 0053.scaffold00196 267344 1 T C - ReadM SNP 0053.scaffold00196 267380 1 C A - ReadM SNP 0053.scaffold00196 267434 1 T G - ReadM SNP 0053.scaffold00196 267436 1 T C - ReadM SNP 0053.scaffold00196 267602 1 T C - ReadM SNP 0053.scaffold00196 267673 1 C T - ReadM SNP 0053.scaffold00196 267701 1 A T - ReadM SNP 0053.scaffold00196 267804 1 T A - ReadM SNP 0053.scaffold00196 267809 1 T C - ReadM SNP 0053.scaffold00196 267922 1 T C - ReadM SNP 0053.scaffold00196 267924 1 G A - ReadM SNP 0053.scaffold00196 268010 1 T C - ReadM SNP 0053.scaffold00196 268080 1 C T - ReadM SNP 0053.scaffold00196 268095 1 G A - ReadM SNP 0053.scaffold00196 268182 1 T G - ReadM SNP 0053.scaffold00196 268222 1 A G - ReadM SNP 0053.scaffold00196 268236 1 G A - ReadM INDEL 0053.scaffold00196 268312 1 C . - ReadM SNP 0053.scaffold00196 268415 1 G T - ReadM SNP 0053.scaffold00196 268502 1 C A - ReadM SNP 0053.scaffold00196 268594 1 G A - ReadM SNP 0053.scaffold00196 268601 1 A G - ReadM SNP 0053.scaffold00196 268642 1 C A - ReadM SNP 0053.scaffold00196 268706 1 C G - ReadM SNP 0053.scaffold00196 268783 1 T A - ReadM SNP 0053.scaffold00196 268892 1 A G - ReadM SNP 0053.scaffold00196 269037 1 G C - ReadM SNP 0053.scaffold00196 269049 1 A G - ReadM SNP 0053.scaffold00196 269054 1 C T - ReadM SNP 0053.scaffold00196 269146 1 C T - ReadM SNP 0053.scaffold00196 269152 1 A G - ReadM SNP 0053.scaffold00196 269166 1 A G - ReadM SNP 0053.scaffold00196 269229 1 G A - ReadM SNP 0053.scaffold00196 269244 1 G A - ReadM SNP 0053.scaffold00196 269325 1 T C - ReadM SNP 0053.scaffold00196 269483 1 T C - ReadM SNP 0053.scaffold00196 269519 1 A G - ReadM SNP 0053.scaffold00196 269528 1 C T - ReadM SNP 0053.scaffold00196 269653 1 C T - ReadM SNP 0053.scaffold00196 269782 1 A G - ReadM SNP 0053.scaffold00196 269787 1 G A - ReadM SNP 0053.scaffold00196 269841 1 A G - ReadM SNP 0053.scaffold00196 269847 1 T C - ReadM SNP 0053.scaffold00196 270241 1 A G - ReadM SNP 0053.scaffold00196 270385 1 T C - ReadM SNP 0053.scaffold00196 270503 1 C A - ReadM SNP 0053.scaffold00196 270516 1 C G - ReadM SNP 0053.scaffold00196 270547 1 T C - ReadM SNP 0053.scaffold00196 270695 1 C A - ReadM SNP 0053.scaffold00196 270712 1 T C - ReadM SNP 0053.scaffold00196 270779 1 T C - ReadM SNP 0053.scaffold00196 270801 1 T C - ReadM INDEL 0053.scaffold00196 270857 1 A . - ReadM INDEL 0053.scaffold00196 270954 2 .. AG - ReadM SNP 0053.scaffold00196 271244 1 A C - ReadM SNP 0053.scaffold00196 271341 1 T C - ReadM SNP 0053.scaffold00196 271367 1 C A - ReadM SNP 0053.scaffold00196 271407 1 G A - ReadM SNP 0053.scaffold00196 271460 1 G C - ReadM SNP 0053.scaffold00196 271476 1 T C - ReadM SNP 0053.scaffold00196 271746 1 G A - ReadM SNP 0053.scaffold00196 271750 1 G A - ReadM SNP 0053.scaffold00196 271852 1 C A - ReadM SNP 0053.scaffold00196 271930 1 G A - ReadM SNP 0053.scaffold00196 271990 1 A T - ReadM SNP 0053.scaffold00196 272056 1 T C - ReadM SNP 0053.scaffold00196 272075 1 G C - ReadM SNP 0053.scaffold00196 272220 1 T C - ReadM SNP 0053.scaffold00196 272234 1 T C - ReadM SNP 0053.scaffold00196 272242 1 G T - ReadM SNP 0053.scaffold00196 272398 1 T G - ReadM SNP 0053.scaffold00196 272595 1 C G - ReadM SNP 0053.scaffold00196 272617 1 C A - ReadM SNP 0053.scaffold00196 272708 1 C T - ReadM SNP 0053.scaffold00196 272865 1 A G - ReadM SNP 0053.scaffold00196 272893 1 A G - ReadM SNP 0053.scaffold00196 273195 1 A C - ReadM SNP 0053.scaffold00196 273356 1 T C - ReadM SNP 0053.scaffold00196 273405 1 A G - ReadM SNP 0053.scaffold00196 273495 1 T C - ReadM SNP 0053.scaffold00196 273703 1 G A - ReadM SNP 0053.scaffold00196 273835 1 C T - ReadM SNP 0053.scaffold00196 273976 1 G C - ReadM SNP 0053.scaffold00196 273995 1 T C - ReadM SNP 0053.scaffold00196 274047 1 C T - ReadM SNP 0053.scaffold00196 274128 1 A G - ReadM SNP 0053.scaffold00196 274138 1 T C - ReadM SNP 0053.scaffold00196 274146 1 C T - ReadM SNP 0053.scaffold00196 274213 1 T C - ReadM SNP 0053.scaffold00196 274220 1 C T - ReadM SNP 0053.scaffold00196 274263 1 T C - ReadM SNP 0053.scaffold00196 274297 1 A G - ReadM INDEL 0053.scaffold00196 274332 1 T . - ReadM SNP 0053.scaffold00196 274494 1 T C - ReadM SNP 0053.scaffold00196 274558 1 C T - ReadM SNP 0053.scaffold00196 274667 1 T C - ReadM SNP 0053.scaffold00196 274696 1 C T - ReadM SNP 0053.scaffold00196 274796 1 C T - ReadM SNP 0053.scaffold00196 274859 1 G A - ReadM SNP 0053.scaffold00196 274893 1 G C - ReadM SNP 0053.scaffold00196 274969 1 A G - ReadM SNP 0053.scaffold00196 274978 1 A G - ReadM SNP 0053.scaffold00196 275024 1 T C - ReadM SNP 0053.scaffold00196 275109 1 C T - ReadM SNP 0053.scaffold00196 275115 1 A C - ScafM SNP 0053.scaffold00196 275174 1 A C scaffold10936 ScafM SNP 0053.scaffold00196 275179 1 A G scaffold10936 ScafM INDEL 0053.scaffold00196 275208 4 .... TCCT scaffold10936 Both SNP 0053.scaffold00196 275234 1 C A scaffold10936 Both SNP 0053.scaffold00196 275256 1 T C scaffold10936 ReadM INDEL 0053.scaffold00196 275391 1 T . - ReadM SNP 0053.scaffold00196 275464 1 A G - ReadM SNP 0053.scaffold00196 275625 1 C T - ReadM SNP 0053.scaffold00196 275667 1 C T - ReadM SNP 0053.scaffold00196 275888 1 G A - ReadM SNP 0053.scaffold00196 275932 1 A G - ReadM SNP 0053.scaffold00196 276078 1 A C - ReadM SNP 0053.scaffold00196 276082 1 T C - ReadM SNP 0053.scaffold00196 276122 1 G A - ReadM SNP 0053.scaffold00196 276216 1 T C - ReadM SNP 0053.scaffold00196 276234 1 G A - ReadM SNP 0053.scaffold00196 276277 1 T A - ReadM SNP 0053.scaffold00196 276324 1 C T - ReadM SNP 0053.scaffold00196 276474 1 G A - ReadM SNP 0053.scaffold00196 276512 1 T C - ReadM SNP 0053.scaffold00196 276529 1 A G - ReadM SNP 0053.scaffold00196 276620 1 G A - ReadM SNP 0053.scaffold00196 276664 1 C T - ReadM SNP 0053.scaffold00196 276742 1 T A - ReadM SNP 0053.scaffold00196 276801 1 C T - ReadM SNP 0053.scaffold00196 276810 1 T G - ReadM SNP 0053.scaffold00196 276888 1 T C - ReadM SNP 0053.scaffold00196 276931 1 C T - ReadM SNP 0053.scaffold00196 276972 1 C T - ReadM SNP 0053.scaffold00196 277130 1 G T - ReadM SNP 0053.scaffold00196 277150 1 G A - ReadM SNP 0053.scaffold00196 277202 1 G A - ReadM SNP 0053.scaffold00196 277226 1 G A - ReadM SNP 0053.scaffold00196 277260 1 A G - ReadM SNP 0053.scaffold00196 277543 1 A G - ReadM SNP 0053.scaffold00196 277688 1 G A - ReadM SNP 0053.scaffold00196 277723 1 A T - ReadM SNP 0053.scaffold00196 277748 1 G A - ReadM SNP 0053.scaffold00196 277808 1 A G - ReadM SNP 0053.scaffold00196 277907 1 C T - ReadM SNP 0053.scaffold00196 277912 1 A C - ReadM SNP 0053.scaffold00196 277925 1 A G - ReadM SNP 0053.scaffold00196 277967 1 T C - ReadM SNP 0053.scaffold00196 278173 1 T C - ReadM SNP 0053.scaffold00196 278244 1 C T - ReadM SNP 0053.scaffold00196 278332 1 T C - ReadM SNP 0053.scaffold00196 278392 1 T G - ReadM SNP 0053.scaffold00196 278409 1 T C - ReadM SNP 0053.scaffold00196 278425 1 G A - ReadM SNP 0053.scaffold00196 278513 1 T C - ReadM SNP 0053.scaffold00196 278971 1 G A - ReadM SNP 0053.scaffold00196 279025 1 T C - ReadM SNP 0053.scaffold00196 279237 1 A G - ReadM SNP 0053.scaffold00196 279269 1 A G - ReadM SNP 0053.scaffold00196 279312 1 A T - ReadM SNP 0053.scaffold00196 279348 1 A C - ReadM SNP 0053.scaffold00196 279406 1 A G - ReadM SNP 0053.scaffold00196 279439 1 T C - ReadM SNP 0053.scaffold00196 279498 1 T C - ReadM SNP 0053.scaffold00196 279593 1 T C - ReadM SNP 0053.scaffold00196 279602 1 C T - ReadM SNP 0053.scaffold00196 279693 1 A G - ReadM SNP 0053.scaffold00196 279752 1 T C - ReadM SNP 0053.scaffold00196 279757 1 A C - ReadM SNP 0053.scaffold00196 279797 1 C T - ReadM SNP 0053.scaffold00196 279816 1 T C - ReadM SNP 0053.scaffold00196 279831 1 C T - ReadM SNP 0053.scaffold00196 279921 1 G A - ReadM SNP 0053.scaffold00196 279940 1 A G - ReadM SNP 0053.scaffold00196 279982 1 C T - ReadM SNP 0053.scaffold00196 280030 1 T G - ReadM SNP 0053.scaffold00196 280355 1 C T - ReadM SNP 0053.scaffold00196 280983 1 A C - ReadM SNP 0053.scaffold00196 281003 1 C A - ReadM SNP 0053.scaffold00196 281029 1 T A - ReadM SNP 0053.scaffold00196 282036 1 A G - ReadM SNP 0053.scaffold00196 282057 1 A G - ReadM SNP 0053.scaffold00196 282267 1 A T - ReadM SNP 0053.scaffold00196 282316 1 G A - ReadM SNP 0053.scaffold00196 282414 1 A G - ReadM SNP 0053.scaffold00196 282472 1 G A - ReadM SNP 0053.scaffold00196 282507 1 C T - ReadM INDEL 0053.scaffold00196 282576 1 T . - ReadM SNP 0053.scaffold00196 282973 1 G A - ReadM SNP 0053.scaffold00196 282981 1 A G - ReadM SNP 0053.scaffold00196 283136 1 A G - ReadM SNP 0053.scaffold00196 283178 1 A C - ReadM SNP 0053.scaffold00196 283204 1 A G - ReadM SNP 0053.scaffold00196 283571 1 A C - ReadM SNP 0053.scaffold00196 284332 1 C T - ReadM SNP 0053.scaffold00196 284342 1 G A - ReadM SNP 0053.scaffold00196 284726 1 G C - ReadM SNP 0053.scaffold00196 284821 1 C A - ReadM SNP 0053.scaffold00196 284983 1 C T - ReadM INDEL 0053.scaffold00196 285066 1 . A - ReadM SNP 0053.scaffold00196 285375 1 C T - ReadM SNP 0053.scaffold00196 285396 1 G A - ReadM SNP 0053.scaffold00196 285442 1 C T - ReadM SNP 0053.scaffold00196 285741 1 T C - ReadM SNP 0053.scaffold00196 285928 1 T G - ReadM SNP 0053.scaffold00196 285966 1 T A - ReadM SNP 0053.scaffold00196 288849 1 C G - ReadM SNP 0053.scaffold00196 288854 1 A G - ScafM INDEL 0053.scaffold00196 324565 1 A . scaffold16557 ScafM SNP 0053.scaffold00196 324567 1 T A scaffold16557 ScafM SNP 0053.scaffold00196 324571 1 C G scaffold16557 ScafM INDEL 0053.scaffold00196 324589 1 . A scaffold16557 ScafM SNP 0053.scaffold00196 324652 1 C T scaffold16557 ScafM SNP 0053.scaffold00196 324719 1 G T scaffold16557 ScafM SNP 0053.scaffold00196 324725 1 C T scaffold16557 ScafM SNP 0053.scaffold00196 325566 1 T A scaffold16557 ScafM SNP 0053.scaffold00196 325588 2 TA AG scaffold16557 ScafM SNP 0053.scaffold00196 325627 1 C A scaffold16557 ScafM SNP 0053.scaffold00196 325636 1 G A scaffold16557 ReadM INDEL 0053.scaffold00196 331605 1 . A - ReadM SNP 0053.scaffold00196 334278 1 T C - Both SNP 0053.scaffold00196 334545 1 G C scaffold7213 Both INDEL 0053.scaffold00196 334563 2 .. AG scaffold7213 Both SNP 0053.scaffold00196 334625 1 C T scaffold7213 Both SNP 0053.scaffold00196 334654 1 G A scaffold7213 ReadM SNP 0053.scaffold00196 334750 1 A G - ReadM INDEL 0053.scaffold00196 334790 1 G . - ReadM INDEL 0053.scaffold00196 334947 1 . G - ReadM SNP 0053.scaffold00196 335164 1 C G - ReadM SNP 0053.scaffold00196 335190 1 G C - Both SNP 0053.scaffold00196 335333 1 T C scaffold7213 Both SNP 0053.scaffold00196 335445 1 G C scaffold7213 Both SNP 0053.scaffold00196 335461 1 C T scaffold7213 Both SNP 0053.scaffold00196 335509 1 A C scaffold7213 ScafM SNP 0053.scaffold00196 335536 1 C T scaffold7213 Both SNP 0053.scaffold00196 335558 1 C G scaffold7213 Both SNP 0053.scaffold00196 335568 1 A G scaffold7213 Both SNP 0053.scaffold00196 335605 1 T C scaffold7213 Both SNP 0053.scaffold00196 335653 1 C T scaffold7213 Both SNP 0053.scaffold00196 335670 1 C T scaffold7213 ScafM SNP 0053.scaffold00196 335796 1 A T scaffold7213 Both SNP 0053.scaffold00196 335821 1 C T scaffold7213 Both SNP 0053.scaffold00196 335825 1 T C scaffold7213 ScafM SNP 0053.scaffold00196 335854 1 G A scaffold7213 ScafM SNP 0053.scaffold00196 335883 1 C T scaffold7213 Both SNP 0053.scaffold00196 335907 1 C G scaffold7213 ScafM SNP 0053.scaffold00196 335923 1 A T scaffold7213 Both SNP 0053.scaffold00196 335961 1 T G scaffold7213 Both SNP 0053.scaffold00196 335964 1 A G scaffold7213 Both SNP 0053.scaffold00196 335979 1 C T scaffold7213 Both SNP 0053.scaffold00196 336049 1 C T scaffold7213 Both SNP 0053.scaffold00196 336055 1 A G scaffold7213 Both SNP 0053.scaffold00196 336124 1 G T scaffold7213 Both SNP 0053.scaffold00196 336156 1 A G scaffold7213 ReadM SNP 0053.scaffold00196 336354 1 G A - ReadM SNP 0053.scaffold00196 336378 1 C A - ReadM SNP 0053.scaffold00196 336382 1 T A - ReadM SNP 0053.scaffold00196 336471 1 C T - ReadM SNP 0053.scaffold00196 336488 1 A G - ReadM SNP 0053.scaffold00196 336644 1 A G - ReadM SNP 0053.scaffold00196 336743 1 A G - ReadM SNP 0053.scaffold00196 336812 1 T C - ReadM SNP 0053.scaffold00196 336856 1 G C - ReadM SNP 0053.scaffold00196 336859 1 A T - ReadM SNP 0053.scaffold00196 336871 1 T C - ReadM INDEL 0053.scaffold00196 336933 1 . T - ReadM SNP 0053.scaffold00196 336939 1 A C - ReadM SNP 0053.scaffold00196 337127 1 G A - ReadM SNP 0053.scaffold00196 337242 1 C T - ReadM SNP 0053.scaffold00196 337261 1 A G - ReadM SNP 0053.scaffold00196 337286 1 G A - ReadM SNP 0053.scaffold00196 337400 1 T C - ReadM SNP 0053.scaffold00196 337513 1 A C - ReadM SNP 0053.scaffold00196 337546 1 G T - ReadM SNP 0053.scaffold00196 337569 1 A G - ReadM SNP 0053.scaffold00196 337629 1 T C - ReadM SNP 0053.scaffold00196 337641 1 C G - ReadM SNP 0053.scaffold00196 337699 1 T C - ReadM SNP 0053.scaffold00196 337768 1 A C - ReadM INDEL 0053.scaffold00196 337795 1 . T - ReadM SNP 0053.scaffold00196 337896 1 T C - ReadM SNP 0053.scaffold00196 337957 1 A G - ReadM INDEL 0053.scaffold00196 338056 1 . G - ReadM SNP 0053.scaffold00196 338082 1 A G - ReadM SNP 0053.scaffold00196 338092 1 T G - ReadM SNP 0053.scaffold00196 338163 1 C T - ReadM SNP 0053.scaffold00196 338175 1 G T - Both SNP 0053.scaffold00196 338218 1 T C scaffold7213 Both SNP 0053.scaffold00196 338290 1 C A scaffold7213 Both SNP 0053.scaffold00196 338402 1 C T scaffold7213 Both SNP 0053.scaffold00196 338436 1 T C scaffold7213 Both SNP 0053.scaffold00196 338455 1 A G scaffold7213 Both SNP 0053.scaffold00196 338467 1 G T scaffold7213 ReadM SNP 0053.scaffold00196 338639 1 C T - Both SNP 0053.scaffold00196 338738 1 T C scaffold7213 Both SNP 0053.scaffold00196 338809 1 A G scaffold7213 Both SNP 0053.scaffold00196 338826 1 G A scaffold7213 ReadM SNP 0053.scaffold00196 339006 1 T C - ReadM SNP 0053.scaffold00196 339128 1 A G - ReadM SNP 0053.scaffold00196 339151 1 T C - ReadM SNP 0053.scaffold00196 339181 1 G A - ReadM INDEL 0053.scaffold00196 339189 1 T . - ReadM SNP 0053.scaffold00196 339302 1 A G - ReadM SNP 0053.scaffold00196 339378 1 G A - ReadM SNP 0053.scaffold00196 339383 1 T A - Both SNP 0053.scaffold00196 339403 1 G A scaffold7213 Both SNP 0053.scaffold00196 339417 1 G T scaffold7213 Both SNP 0053.scaffold00196 339564 1 A G scaffold7213 Both SNP 0053.scaffold00196 339613 1 T C scaffold7213 ReadM SNP 0053.scaffold00196 339897 1 T C - ReadM SNP 0053.scaffold00196 339910 1 G A - ReadM SNP 0053.scaffold00196 339919 1 A T - ReadM SNP 0053.scaffold00196 339999 1 G T - ReadM SNP 0053.scaffold00196 340123 1 C T - ReadM SNP 0053.scaffold00196 340231 1 C G - ReadM SNP 0053.scaffold00196 340276 1 A C - ReadM SNP 0053.scaffold00196 340293 1 G T - ReadM SNP 0053.scaffold00196 340300 1 G A - ReadM SNP 0053.scaffold00196 340539 1 G C - ReadM SNP 0053.scaffold00196 340622 1 T C - ReadM SNP 0053.scaffold00196 340648 1 T C - ReadM SNP 0053.scaffold00196 340762 1 G T - ReadM SNP 0053.scaffold00196 340808 1 T A - ReadM SNP 0053.scaffold00196 340829 1 G A - ReadM SNP 0053.scaffold00196 340940 1 G T - ReadM SNP 0053.scaffold00196 340964 1 T C - ReadM INDEL 0053.scaffold00196 341034 1 . G - ReadM SNP 0053.scaffold00196 341046 1 A T - ReadM SNP 0053.scaffold00196 341095 1 C T - ReadM SNP 0053.scaffold00196 341100 1 A G - ReadM SNP 0053.scaffold00196 341160 1 G A - ReadM SNP 0053.scaffold00196 341203 1 C T - ReadM INDEL 0053.scaffold00196 341220 1 . A - ReadM SNP 0053.scaffold00196 341248 1 A C - ReadM SNP 0053.scaffold00196 341252 1 G A - ReadM INDEL 0053.scaffold00196 341292 1 . T - ReadM SNP 0053.scaffold00196 341344 1 T A - ReadM SNP 0053.scaffold00196 341373 1 G A - ReadM SNP 0053.scaffold00196 341414 1 G A - ReadM SNP 0053.scaffold00196 341476 1 A T - ReadM INDEL 0053.scaffold00196 341479 1 T . - ReadM SNP 0053.scaffold00196 341545 1 A C - ReadM SNP 0053.scaffold00196 341563 1 C T - ReadM SNP 0053.scaffold00196 341676 1 G A - ReadM SNP 0053.scaffold00196 341682 1 G T - ReadM SNP 0053.scaffold00196 341734 1 A C - Both INDEL 0053.scaffold00196 341803 1 . A scaffold7213 Both SNP 0053.scaffold00196 341919 1 G C scaffold7213 ScafM INDEL 0053.scaffold00196 342004 1 . A scaffold7213 ReadM SNP 0053.scaffold00196 342189 1 G A - ReadM SNP 0053.scaffold00196 342489 1 A G - Both SNP 0053.scaffold00196 342534 1 C T scaffold7213 Both SNP 0053.scaffold00196 342651 1 T C scaffold7213 Both SNP 0053.scaffold00196 342657 1 A G scaffold7213 Both SNP 0053.scaffold00196 342760 1 T G scaffold7213 Both SNP 0053.scaffold00196 342862 1 T C scaffold7213 Both SNP 0053.scaffold00196 342886 1 A G scaffold7213 ScafM SNP 0053.scaffold00196 342952 1 A G scaffold7213 Both INDEL 0053.scaffold00196 342959 1 G . scaffold7213 Both SNP 0053.scaffold00196 343046 1 T A scaffold7213 Both SNP 0053.scaffold00196 343175 1 T G scaffold7213 ReadM SNP 0053.scaffold00196 343340 1 T A - Both INDEL 0053.scaffold00196 343408 1 A . scaffold7213 ScafM SNP 0053.scaffold00196 343414 1 T A scaffold7213 Both SNP 0053.scaffold00196 343441 1 A G scaffold7213 Both SNP 0053.scaffold00196 343453 1 T A scaffold7213 Both INDEL 0053.scaffold00196 343507 1 C . scaffold7213 Both SNP 0053.scaffold00196 343540 1 G A scaffold7213 Both SNP 0053.scaffold00196 343813 1 C T scaffold7213 Both SNP 0053.scaffold00196 343959 1 T A scaffold7213 Both INDEL 0053.scaffold00196 343963 2 GG .. scaffold7213 Both SNP 0053.scaffold00196 344057 1 A G scaffold7213 Both SNP 0053.scaffold00196 344072 1 A G scaffold7213 Both SNP 0053.scaffold00196 344237 1 T A scaffold7213 Both SNP 0053.scaffold00196 344421 1 T C scaffold7213 Both INDEL 0053.scaffold00196 344428 2 AC .. scaffold7213 Both SNP 0053.scaffold00196 344520 1 A G scaffold7213 Both SNP 0053.scaffold00196 344604 1 A G scaffold7213 Both SNP 0053.scaffold00196 344624 1 A C scaffold7213 Both SNP 0053.scaffold00196 344819 1 T C scaffold7213 Both SNP 0053.scaffold00196 344985 1 A G scaffold7213 Both INDEL 0053.scaffold00196 345015 1 . A scaffold7213 ReadM SNP 0053.scaffold00196 345286 1 T C - ReadM INDEL 0053.scaffold00196 345487 1 G . - ReadM SNP 0053.scaffold00196 345561 1 A G - ReadM SNP 0053.scaffold00196 345583 1 C T - ReadM SNP 0053.scaffold00196 345606 1 G A - ReadM SNP 0053.scaffold00196 345724 1 C T - ReadM SNP 0053.scaffold00196 345754 1 A G - ReadM SNP 0053.scaffold00196 345788 1 C T - ReadM SNP 0053.scaffold00196 346042 1 C T - ReadM SNP 0053.scaffold00196 346085 1 C T - ReadM SNP 0053.scaffold00196 346190 1 A G - Both SNP 0053.scaffold00196 346584 1 G A scaffold7213 Both SNP 0053.scaffold00196 346608 1 C T scaffold7213 Both SNP 0053.scaffold00196 347046 1 G T scaffold7213 Both SNP 0053.scaffold00196 347060 2 TC AA scaffold7213 Both SNP 0053.scaffold00196 347169 1 G A scaffold7213 Both SNP 0053.scaffold00196 347259 1 A G scaffold7213 Both SNP 0053.scaffold00196 347285 1 A G scaffold7213 ScafM INDEL 0053.scaffold00196 347468 4 GAAG .... scaffold7213 ScafM SNP 0053.scaffold00196 347548 1 T G scaffold7213 Both SNP 0053.scaffold00196 347555 1 T C scaffold7213 Both SNP 0053.scaffold00196 347629 1 A G scaffold7213 Both SNP 0053.scaffold00196 347734 1 T A scaffold7213 Both INDEL 0053.scaffold00196 347925 3 GAG ... scaffold7213 Both SNP 0053.scaffold00196 348219 1 G C scaffold7213 Both SNP 0053.scaffold00196 348223 1 G A scaffold7213 ReadM SNP 0053.scaffold00196 348469 1 A G - ReadM SNP 0053.scaffold00196 348485 1 G A - Both SNP 0053.scaffold00196 349183 1 T C scaffold7213 ScafM SNP 0053.scaffold00196 349222 1 A G scaffold7213 Both INDEL 0053.scaffold00196 349224 1 G . scaffold7213 ScafM INDEL 0053.scaffold00196 349534 1 . T scaffold7213 ReadM SNP 0053.scaffold00196 349843 1 T C - ReadM SNP 0053.scaffold00196 350412 1 C A - ReadM SNP 0053.scaffold00196 350432 1 A C - ReadM SNP 0053.scaffold00196 350536 1 G A - Both INDEL 0053.scaffold00196 350639 2 .. GC scaffold7213 Both SNP 0053.scaffold00196 351159 1 A G scaffold7213 Both INDEL 0053.scaffold00196 351164 1 . A scaffold7213 Both SNP 0053.scaffold00196 351402 1 T C scaffold7213 Both SNP 0053.scaffold00196 351639 1 A G scaffold7213 Both SNP 0053.scaffold00196 351860 1 T C scaffold7213 Both SNP 0053.scaffold00196 352070 1 A G scaffold7213 Both SNP 0053.scaffold00196 352234 1 T G scaffold7213 Both SNP 0053.scaffold00196 352397 1 G A scaffold7213 Both SNP 0053.scaffold00196 352454 1 T C scaffold7213 Both SNP 0053.scaffold00196 352640 1 G A scaffold7213 Both SNP 0053.scaffold00196 353051 1 A G scaffold7213 Both INDEL 0053.scaffold00196 353065 2 AA .. scaffold7213 Both SNP 0053.scaffold00196 353213 1 G A scaffold7213 Both SNP 0053.scaffold00196 353248 1 T C scaffold7213 Both SNP 0053.scaffold00196 353337 1 C T scaffold7213 Both SNP 0053.scaffold00196 353375 1 G T scaffold7213 Both SNP 0053.scaffold00196 353581 1 C G scaffold7213 ReadM SNP 0053.scaffold00196 353851 1 A G - ReadM SNP 0053.scaffold00196 353957 1 G A - ReadM SNP 0053.scaffold00196 354100 1 G T - ReadM SNP 0053.scaffold00196 354123 1 C A - ReadM SNP 0053.scaffold00196 354152 1 A T - ReadM SNP 0053.scaffold00196 354291 1 A C - ScafM SNP 0053.scaffold00196 354849 1 G A scaffold7213 ScafM SNP 0053.scaffold00196 355076 1 A C scaffold7213 ScafM SNP 0053.scaffold00196 355268 1 C G scaffold7213 Both SNP 0053.scaffold00196 355532 1 C T scaffold7213 Both SNP 0053.scaffold00196 355707 1 G T scaffold7213 Both SNP 0053.scaffold00196 355803 1 C T scaffold7213 Both SNP 0053.scaffold00196 355823 1 A G scaffold7213 Both SNP 0053.scaffold00196 355978 1 T C scaffold7213 ReadM SNP 0053.scaffold00196 356032 1 C A - ReadM SNP 0053.scaffold00196 356144 1 C A - ReadM SNP 0053.scaffold00196 356177 1 C T - ReadM SNP 0053.scaffold00196 356253 1 C T - ReadM SNP 0053.scaffold00196 356278 1 C T - ReadM SNP 0053.scaffold00196 356337 1 T A - ReadM SNP 0053.scaffold00196 356492 1 C T - ReadM SNP 0053.scaffold00196 356558 1 T G - Both SNP 0053.scaffold00196 356785 1 G A scaffold7213 Both INDEL 0053.scaffold00196 356840 1 . A scaffold7213 Both SNP 0053.scaffold00196 357016 1 A T scaffold7213 ReadM SNP 0053.scaffold00196 357160 1 T C - ReadM INDEL 0053.scaffold00196 357520 1 T . - ReadM SNP 0053.scaffold00196 357528 1 A G - Both SNP 0053.scaffold00196 358202 1 C T scaffold7213 Both SNP 0053.scaffold00196 358673 1 T C scaffold7213 ScafM INDEL 0053.scaffold00196 358908 6 TTGATT ...... scaffold7213 ScafM SNP 0053.scaffold00196 358921 1 G A scaffold7213 ScafM SNP 0053.scaffold00196 359024 1 G C scaffold7213 ScafM SNP 0053.scaffold00196 359632 1 C T scaffold19646 ScafM SNP 0053.scaffold00196 359634 1 A G scaffold19646 ScafM INDEL 0053.scaffold00196 359638 2 .. TA scaffold19646 ScafM SNP 0053.scaffold00196 359676 1 A G scaffold19646 ScafM SNP 0053.scaffold00196 359679 1 C T scaffold19646 ScafM SNP 0053.scaffold00196 359703 1 T C scaffold19646 ScafM SNP 0053.scaffold00196 359738 1 A T scaffold19646 ScafM SNP 0053.scaffold00196 359823 1 T A scaffold19646 ScafM SNP 0053.scaffold00196 359829 1 A G scaffold19646 ScafM INDEL 0053.scaffold00196 359848 1 . G scaffold19646 ScafM INDEL 0053.scaffold00196 359859 7 ....... ATAAATG scaffold19646 ScafM SNP 0053.scaffold00196 359919 1 G C scaffold19646 ScafM SNP 0053.scaffold00196 359950 1 T C scaffold19646 ScafM SNP 0053.scaffold00196 359956 1 G T scaffold19646 ScafM INDEL 0053.scaffold00196 360014 2 .. CA scaffold19646 ScafM SNP 0053.scaffold00196 361044 1 A G scaffold19646 ScafM SNP 0053.scaffold00196 361150 1 A G scaffold19646 ScafM SNP 0053.scaffold00196 361165 1 G A scaffold19646 ScafM SNP 0053.scaffold00196 361176 1 G A scaffold19646 ScafM INDEL 0053.scaffold00196 362027 1 A . scaffold7322 ScafM SNP 0053.scaffold00196 362031 1 A G scaffold7322 ScafM SNP 0053.scaffold00196 362363 1 A G scaffold9768 ScafM SNP 0053.scaffold00196 362401 1 T A scaffold9768 ScafM SNP 0053.scaffold00196 362420 2 AG GA scaffold9768 ScafM SNP 0053.scaffold00196 362440 2 AT TC scaffold9768 ScafM SNP 0053.scaffold00196 362446 1 A G scaffold9768 ScafM SNP 0053.scaffold00196 362456 2 AA CT scaffold9768 ScafM SNP 0053.scaffold00196 362512 1 C T scaffold9768 ScafM SNP 0053.scaffold00196 362545 1 G A scaffold9768 ScafM SNP 0053.scaffold00196 362551 1 T G scaffold9768 ScafM SNP 0053.scaffold00196 363090 1 T C scaffold10369 ScafM SNP 0053.scaffold00196 363116 1 T C scaffold10369 ScafM SNP 0053.scaffold00196 363140 1 G A scaffold10369 ScafM SNP 0053.scaffold00196 363149 1 T C scaffold10369 ScafM INDEL 0053.scaffold00196 363187 1 . A scaffold10369 ScafM SNP 0053.scaffold00196 363210 1 G A scaffold10369 ScafM SNP 0053.scaffold00196 363220 1 A C scaffold10369 ScafM SNP 0053.scaffold00196 363255 1 A C scaffold10369 ScafM SNP 0053.scaffold00196 363296 1 C T scaffold10369 ScafM SNP 0053.scaffold00196 363321 1 G A scaffold10369 ScafM SNP 0053.scaffold00196 363368 1 C T scaffold10369 ScafM SNP 0053.scaffold00196 363374 1 G A scaffold10369 ReadM SNP 0053.scaffold00196 363700 1 G T - ReadM SNP 0053.scaffold00196 363717 1 T C - ReadM SNP 0053.scaffold00196 363754 1 C T - ReadM SNP 0053.scaffold00196 363889 1 C T - ReadM SNP 0053.scaffold00196 364053 1 A T - ReadM SNP 0053.scaffold00196 364088 1 A G - ReadM INDEL 0053.scaffold00196 364248 1 . T - ReadM SNP 0053.scaffold00196 364283 1 T C - ScafM SNP 0053.scaffold00196 364380 1 A G scaffold7213 ScafM INDEL 0053.scaffold00196 364401 7 GCAAATT ....... scaffold7213 ScafM SNP 0053.scaffold00196 364425 1 A T scaffold7213 ScafM SNP 0053.scaffold00196 364564 1 T G scaffold7213 ScafM INDEL 0053.scaffold00196 366041 2 .. TT scaffold7213 ScafM SNP 0053.scaffold00196 366060 1 G A scaffold7213 ReadM SNP 0053.scaffold00196 366850 1 T A - ReadM SNP 0053.scaffold00196 367029 1 G C - ReadM SNP 0053.scaffold00196 367047 1 G C - ReadM SNP 0053.scaffold00196 367094 1 C T - ReadM SNP 0053.scaffold00196 367122 1 C T - ReadM SNP 0053.scaffold00196 367164 1 G A - ReadM SNP 0053.scaffold00196 367342 1 T C - ReadM SNP 0053.scaffold00196 367367 1 G C - ReadM SNP 0053.scaffold00196 367512 1 C T - ReadM INDEL 0053.scaffold00196 367543 1 T . - ReadM SNP 0053.scaffold00196 367695 1 C T - ReadM SNP 0053.scaffold00196 367782 1 G T - ReadM SNP 0053.scaffold00196 368217 1 A G - ReadM SNP 0053.scaffold00196 368240 1 C A - ReadM SNP 0053.scaffold00196 368254 1 G A - ReadM SNP 0053.scaffold00196 368570 1 C T - ReadM INDEL 0053.scaffold00196 368658 1 T . - ReadM SNP 0053.scaffold00196 368710 1 C A - ReadM SNP 0053.scaffold00196 368784 1 C T - ReadM SNP 0053.scaffold00196 368835 1 A G - ReadM SNP 0053.scaffold00196 368840 1 G A - ReadM SNP 0053.scaffold00196 368917 1 T A - ReadM SNP 0053.scaffold00196 369105 1 G C - ReadM SNP 0053.scaffold00196 369121 1 G A - ReadM SNP 0053.scaffold00196 369238 1 A G - ReadM SNP 0053.scaffold00196 369283 1 G T - ReadM SNP 0053.scaffold00196 369325 1 A T - ReadM SNP 0053.scaffold00196 369532 1 C T - ReadM SNP 0053.scaffold00196 369534 1 A G - ReadM SNP 0053.scaffold00196 369717 1 A T - ReadM SNP 0053.scaffold00196 369754 1 C A - ReadM SNP 0053.scaffold00196 369866 1 A T - ReadM SNP 0053.scaffold00196 370100 1 C T - ReadM SNP 0053.scaffold00196 370180 1 G A - ReadM SNP 0053.scaffold00196 370193 1 A C - ReadM SNP 0053.scaffold00196 370373 1 A C - ReadM SNP 0053.scaffold00196 370433 1 A C - ReadM SNP 0053.scaffold00196 370504 1 C T - ReadM SNP 0053.scaffold00196 370574 1 G A - ReadM SNP 0053.scaffold00196 370821 1 C A - ReadM SNP 0053.scaffold00196 370887 1 G A - ReadM SNP 0053.scaffold00196 371047 1 G A - ReadM SNP 0053.scaffold00196 371115 1 A T - ReadM SNP 0053.scaffold00196 371168 1 T C - ReadM SNP 0053.scaffold00196 371176 1 C T - ReadM SNP 0053.scaffold00196 371253 1 C A - ReadM SNP 0053.scaffold00196 371354 1 T G - ReadM SNP 0053.scaffold00196 371511 1 A G - ReadM SNP 0053.scaffold00196 371555 1 C T - ReadM SNP 0053.scaffold00196 371599 1 T C - ReadM SNP 0053.scaffold00196 371614 1 G A - ReadM SNP 0053.scaffold00196 371701 1 C T - ReadM SNP 0053.scaffold00196 371771 1 A G - ScafM SNP 0053.scaffold00196 372472 1 G A scaffold26531 Both SNP 0053.scaffold00196 372768 1 G C scaffold26531 Both SNP 0053.scaffold00196 372806 1 G A scaffold26531 Both SNP 0053.scaffold00196 372831 1 G A scaffold26531 Both SNP 0053.scaffold00196 372933 1 G A scaffold26531 Both SNP 0053.scaffold00196 372942 1 G T scaffold26531 Both SNP 0053.scaffold00196 372952 1 G A scaffold26531 Both SNP 0053.scaffold00196 373114 1 T C scaffold26531 Both SNP 0053.scaffold00196 373300 1 C T scaffold26531 Both INDEL 0053.scaffold00196 373425 1 . T scaffold26531 Both SNP 0053.scaffold00196 373456 1 C T scaffold26531 Both SNP 0053.scaffold00196 373651 1 T A scaffold26531 Both SNP 0053.scaffold00196 373790 1 G C scaffold26531 Both SNP 0053.scaffold00196 373798 1 C G scaffold26531 Both SNP 0053.scaffold00196 373881 1 G C scaffold26531 Both SNP 0053.scaffold00196 373917 1 G A scaffold26531 Both SNP 0053.scaffold00196 373967 1 A G scaffold26531 Both SNP 0053.scaffold00196 374134 1 T A scaffold26531 Both SNP 0053.scaffold00196 374248 1 C T scaffold26531 Both SNP 0053.scaffold00196 374346 1 G T scaffold26531 Both SNP 0053.scaffold00196 374698 1 C T scaffold26531 Both SNP 0053.scaffold00196 374739 1 C T scaffold26531 Both SNP 0053.scaffold00196 374939 1 T C scaffold26531 Both SNP 0053.scaffold00196 374973 1 A G scaffold26531 Both SNP 0053.scaffold00196 375054 1 T G scaffold26531 Both SNP 0053.scaffold00196 375070 1 G A scaffold26531 ScafM SNP 0053.scaffold00196 375135 4 AAAA TTTT scaffold26531 Both SNP 0053.scaffold00196 375316 1 A T scaffold26531 Both SNP 0053.scaffold00196 375349 1 T A scaffold26531 Both SNP 0053.scaffold00196 375422 1 C T scaffold26531 Both SNP 0053.scaffold00196 375445 1 T A scaffold26531 ScafM SNP 0053.scaffold00196 375506 1 G A scaffold26531 ScafM SNP 0053.scaffold00196 375524 1 G A scaffold26531 ScafM SNP 0053.scaffold00196 375544 1 A T scaffold26531 ScafM SNP 0053.scaffold00196 375563 1 G C scaffold26531 ScafM SNP 0053.scaffold00196 375565 1 C A scaffold26531 Both SNP 0053.scaffold00196 375784 1 A G scaffold26531 Both SNP 0053.scaffold00196 375812 1 C T scaffold26531 Both SNP 0053.scaffold00196 375882 1 G C scaffold26531 Both SNP 0053.scaffold00196 375913 1 G A scaffold26531 Both SNP 0053.scaffold00196 375940 1 C T scaffold26531 ScafM SNP 0053.scaffold00196 375972 1 T G scaffold26531 ScafM INDEL 0053.scaffold00196 376019 4 TGTG .... scaffold26531 ScafM SNP 0053.scaffold00196 376029 1 T C scaffold26531 ScafM SNP 0053.scaffold00196 376063 1 C T scaffold26531 ScafM SNP 0053.scaffold00196 376119 1 T G scaffold26531 Both SNP 0053.scaffold00196 376371 1 A G scaffold26531 Both SNP 0053.scaffold00196 376451 1 A C scaffold26531 Both SNP 0053.scaffold00196 376591 1 G A scaffold26531 Both SNP 0053.scaffold00196 376732 1 G C scaffold26531 Both SNP 0053.scaffold00196 376752 1 C A scaffold26531 Both SNP 0053.scaffold00196 376811 1 A C scaffold26531 Both SNP 0053.scaffold00196 376837 1 C T scaffold26531 Both SNP 0053.scaffold00196 376872 1 C T scaffold26531 Both SNP 0053.scaffold00196 376955 1 T C scaffold26531 ReadM SNP 0053.scaffold00196 377046 1 T G - Both SNP 0053.scaffold00196 377085 1 T C scaffold26531 Both SNP 0053.scaffold00196 377117 1 A G scaffold26531 ScafM SNP 0053.scaffold00196 377175 2 TA CG scaffold26531 Both SNP 0053.scaffold00196 377569 1 G A scaffold26531 Both SNP 0053.scaffold00196 377681 1 C G scaffold26531 Both SNP 0053.scaffold00196 377956 1 G T scaffold26531 Both SNP 0053.scaffold00196 378086 1 A C scaffold26531 Both SNP 0053.scaffold00196 378157 1 T C scaffold26531 Both SNP 0053.scaffold00196 378217 1 A G scaffold26531 Both SNP 0053.scaffold00196 378297 1 A G scaffold26531 Both SNP 0053.scaffold00196 378327 1 C T scaffold26531 Both SNP 0053.scaffold00196 378441 1 T C scaffold26531 Both SNP 0053.scaffold00196 378524 1 A T scaffold26531 ScafM SNP 0053.scaffold00196 378537 1 G T scaffold26531 ScafM INDEL 0053.scaffold00196 378539 1 C . scaffold26531 Both SNP 0053.scaffold00196 378598 1 G A scaffold26531 Both INDEL 0053.scaffold00196 378629 1 T . scaffold26531 Both SNP 0053.scaffold00196 378668 1 A G scaffold26531 Both SNP 0053.scaffold00196 378763 1 A G scaffold26531 Both SNP 0053.scaffold00196 378875 1 T G scaffold26531 Both SNP 0053.scaffold00196 378910 1 T C scaffold26531 Both SNP 0053.scaffold00196 378939 1 G A scaffold26531 Both INDEL 0053.scaffold00196 379050 1 . C scaffold26531 Both SNP 0053.scaffold00196 379055 1 T C scaffold26531 Both SNP 0053.scaffold00196 379084 1 C T scaffold26531 Both SNP 0053.scaffold00196 379211 1 T C scaffold26531 ReadM SNP 0053.scaffold00196 379341 1 A C - ReadM SNP 0053.scaffold00196 379475 1 G A - Both SNP 0053.scaffold00196 379690 1 T C scaffold26531 ReadM SNP 0053.scaffold00196 379801 1 C T - ReadM SNP 0053.scaffold00196 379845 1 A T - Both SNP 0053.scaffold00196 380239 1 C T scaffold26531 Both SNP 0053.scaffold00196 380357 1 G A scaffold26531 ScafM SNP 0053.scaffold00196 380416 1 G A scaffold26531 ScafM INDEL 0053.scaffold00196 380436 1 . A scaffold26531 ScafM SNP 0053.scaffold00196 380504 1 A G scaffold26531 ScafM SNP 0053.scaffold00196 380508 1 C T scaffold26531 ScafM SNP 0053.scaffold00196 381119 1 C T scaffold26531 ScafM SNP 0053.scaffold00196 381159 1 G A scaffold26531 ScafM SNP 0053.scaffold00196 381234 1 A C scaffold26531 Both SNP 0053.scaffold00196 381305 1 T G scaffold26531 ScafM SNP 0053.scaffold00196 381314 1 T C scaffold26531 ScafM SNP 0053.scaffold00196 381349 1 G T scaffold26531 ScafM SNP 0053.scaffold00196 381386 1 T A scaffold26531 Both INDEL 0053.scaffold00196 381485 1 . A scaffold26531 ScafM SNP 0053.scaffold00196 381487 1 A G scaffold26531 Both SNP 0053.scaffold00196 381509 1 C T scaffold26531 Both SNP 0053.scaffold00196 381572 1 T C scaffold26531 Both SNP 0053.scaffold00196 381574 1 A G scaffold26531 ScafM INDEL 0053.scaffold00196 381608 31 ............................... GCACAAAAAAAGCCATAAAAATACGCAGCAT scaffold26531 ReadM SNP 0053.scaffold00196 381779 1 T C - ReadM SNP 0053.scaffold00196 381831 1 C T - ReadM SNP 0053.scaffold00196 381894 1 C A - ReadM SNP 0053.scaffold00196 381922 1 G A - ReadM SNP 0053.scaffold00196 381962 1 T A - ReadM SNP 0053.scaffold00196 382011 1 C T - ReadM SNP 0053.scaffold00196 382115 1 G A - ReadM SNP 0053.scaffold00196 382341 1 T C - ReadM SNP 0053.scaffold00196 382469 1 T G - ReadM SNP 0053.scaffold00196 382554 1 T A - ReadM SNP 0053.scaffold00196 382559 1 T C - ReadM SNP 0053.scaffold00196 382706 1 C T - ReadM SNP 0053.scaffold00196 382751 1 T A - ReadM SNP 0053.scaffold00196 382834 1 C T - ReadM SNP 0053.scaffold00196 382899 1 C T - ReadM SNP 0053.scaffold00196 383016 1 C A - ReadM SNP 0053.scaffold00196 383049 1 A G - ReadM SNP 0053.scaffold00196 383134 1 G A - ReadM SNP 0053.scaffold00196 383209 1 C T - ReadM SNP 0053.scaffold00196 383219 1 G T - ReadM SNP 0053.scaffold00196 383375 1 T C - ReadM SNP 0053.scaffold00196 383418 1 C T - ReadM SNP 0053.scaffold00196 383453 1 C T - ReadM SNP 0053.scaffold00196 383481 1 G C - ReadM SNP 0053.scaffold00196 383489 1 C G - ReadM SNP 0053.scaffold00196 383869 1 A G - ReadM SNP 0053.scaffold00196 383918 1 T G - ReadM SNP 0053.scaffold00196 383982 1 C A - ReadM SNP 0053.scaffold00196 384011 1 G C - ReadM SNP 0053.scaffold00196 384044 1 A G - ReadM SNP 0053.scaffold00196 384133 1 G C - ReadM SNP 0053.scaffold00196 384145 1 G A - ReadM SNP 0053.scaffold00196 384198 1 T C - ReadM SNP 0053.scaffold00196 384200 1 T C - ReadM SNP 0053.scaffold00196 384292 1 G T - ReadM SNP 0053.scaffold00196 384445 1 A T - ReadM SNP 0053.scaffold00196 384496 1 G T - ReadM SNP 0053.scaffold00196 384531 1 G C - ReadM SNP 0053.scaffold00196 384638 1 T C - ReadM SNP 0053.scaffold00196 384675 1 T G - ReadM SNP 0053.scaffold00196 384755 1 C A - ReadM SNP 0053.scaffold00196 384779 1 C T - ReadM SNP 0053.scaffold00196 384800 1 G C - ReadM SNP 0053.scaffold00196 384887 1 A C - ReadM SNP 0053.scaffold00196 384979 1 G A - ReadM SNP 0053.scaffold00196 385013 1 T C - ReadM SNP 0053.scaffold00196 391177 1 G C - ReadM SNP 0053.scaffold00196 391839 1 G C - ReadM SNP 0053.scaffold00196 391915 1 A C - ReadM SNP 0053.scaffold00196 391960 1 G A - ReadM SNP 0053.scaffold00196 391977 1 G C - ReadM SNP 0053.scaffold00196 392011 1 T A - ReadM SNP 0053.scaffold00196 392128 1 A C - ReadM SNP 0053.scaffold00196 392180 1 G T - ReadM SNP 0053.scaffold00196 392572 1 C G - ReadM SNP 0053.scaffold00196 392734 1 T C - ReadM SNP 0053.scaffold00196 392748 1 C T - ReadM SNP 0053.scaffold00196 392779 1 A G - ReadM SNP 0053.scaffold00196 392854 1 C T - ReadM SNP 0053.scaffold00196 392877 1 C T - ReadM SNP 0053.scaffold00196 392935 1 A G - ReadM SNP 0053.scaffold00196 393252 1 A T - ReadM SNP 0053.scaffold00196 393292 1 A T - ReadM SNP 0053.scaffold00196 393338 1 T C - ReadM SNP 0053.scaffold00196 393393 1 C T - ReadM SNP 0053.scaffold00196 393437 1 T G - ReadM SNP 0053.scaffold00196 393456 1 T G - ReadM SNP 0053.scaffold00196 393504 1 G A - ReadM SNP 0053.scaffold00196 393646 1 C T - ReadM SNP 0053.scaffold00196 393751 1 G A - ReadM SNP 0053.scaffold00196 393779 1 T C - ReadM SNP 0053.scaffold00196 393885 1 T C - ReadM SNP 0053.scaffold00196 394004 1 A G - ReadM SNP 0053.scaffold00196 394035 1 C A - ReadM SNP 0053.scaffold00196 394039 1 C T - ReadM SNP 0053.scaffold00196 394072 1 C T - ReadM SNP 0053.scaffold00196 394214 1 T A - ReadM SNP 0053.scaffold00196 394319 1 T G - ReadM SNP 0053.scaffold00196 394329 1 C T - ReadM SNP 0053.scaffold00196 394338 1 G T - ReadM SNP 0053.scaffold00196 394361 1 A G - ReadM SNP 0053.scaffold00196 394382 1 A C - Both SNP 0053.scaffold00196 394643 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 394821 1 T A scaffold9740 Both SNP 0053.scaffold00196 394844 1 G A scaffold9740 ScafM INDEL 0053.scaffold00196 394905 33 ................................. GCTGGCGCTCCCGCTCTGGAGCGGGAGCTTCAA scaffold9740 Both SNP 0053.scaffold00196 394976 1 T C scaffold9740 Both SNP 0053.scaffold00196 395068 1 C T scaffold9740 ReadM SNP 0053.scaffold00196 395254 1 G T - ReadM SNP 0053.scaffold00196 395350 1 A T - ReadM SNP 0053.scaffold00196 395405 1 G T - ReadM SNP 0053.scaffold00196 395411 1 T G - ReadM SNP 0053.scaffold00196 395453 1 C T - ReadM SNP 0053.scaffold00196 395457 1 G C - ReadM SNP 0053.scaffold00196 395542 1 T C - ReadM SNP 0053.scaffold00196 395590 1 T A - ReadM SNP 0053.scaffold00196 395614 1 G A - ReadM SNP 0053.scaffold00196 395662 1 G A - ReadM SNP 0053.scaffold00196 395823 1 T C - ReadM SNP 0053.scaffold00196 395884 1 C T - ReadM SNP 0053.scaffold00196 395933 1 T C - ReadM SNP 0053.scaffold00196 396034 1 G A - ReadM SNP 0053.scaffold00196 396188 1 C T - ReadM SNP 0053.scaffold00196 396308 1 A G - ReadM SNP 0053.scaffold00196 396457 1 A C - ReadM SNP 0053.scaffold00196 396495 1 T C - ReadM SNP 0053.scaffold00196 396591 1 C G - ReadM SNP 0053.scaffold00196 396715 1 T C - ReadM SNP 0053.scaffold00196 396842 1 G A - ReadM SNP 0053.scaffold00196 397110 1 T C - ReadM SNP 0053.scaffold00196 397269 1 A G - Both SNP 0053.scaffold00196 397366 1 C A scaffold9740 Both SNP 0053.scaffold00196 397437 1 T C scaffold9740 Both SNP 0053.scaffold00196 397584 1 A G scaffold9740 Both SNP 0053.scaffold00196 397950 1 T C scaffold9740 ReadM SNP 0053.scaffold00196 398007 1 C T - ReadM SNP 0053.scaffold00196 398042 1 T C - ReadM SNP 0053.scaffold00196 398143 1 C T - ReadM SNP 0053.scaffold00196 398216 1 C G - ReadM SNP 0053.scaffold00196 398354 1 C T - ReadM SNP 0053.scaffold00196 398612 1 G T - ReadM SNP 0053.scaffold00196 398733 1 G A - ReadM SNP 0053.scaffold00196 398753 1 G A - ReadM SNP 0053.scaffold00196 398976 1 G A - ReadM SNP 0053.scaffold00196 399076 1 C A - ReadM SNP 0053.scaffold00196 399205 1 G A - ReadM SNP 0053.scaffold00196 399228 1 G A - ReadM INDEL 0053.scaffold00196 399303 1 . A - ReadM SNP 0053.scaffold00196 399486 1 G A - ReadM SNP 0053.scaffold00196 399537 1 G A - ReadM SNP 0053.scaffold00196 400402 1 T C - ReadM SNP 0053.scaffold00196 400423 1 A G - ReadM SNP 0053.scaffold00196 400598 1 G A - ReadM SNP 0053.scaffold00196 400763 1 T C - ReadM SNP 0053.scaffold00196 400904 1 T C - ReadM SNP 0053.scaffold00196 400938 1 A G - ReadM SNP 0053.scaffold00196 401045 1 G C - ReadM SNP 0053.scaffold00196 401070 1 C T - ReadM SNP 0053.scaffold00196 401075 1 C A - ReadM SNP 0053.scaffold00196 401346 1 A C - ReadM SNP 0053.scaffold00196 401376 1 C T - ReadM SNP 0053.scaffold00196 401432 1 G A - ReadM SNP 0053.scaffold00196 401462 1 T C - ReadM SNP 0053.scaffold00196 401503 1 T C - ReadM SNP 0053.scaffold00196 401591 1 A T - ReadM SNP 0053.scaffold00196 401614 1 T C - ReadM SNP 0053.scaffold00196 401688 1 T G - ReadM SNP 0053.scaffold00196 402895 1 C T - ReadM SNP 0053.scaffold00196 403002 1 C A - ReadM SNP 0053.scaffold00196 403055 1 A G - ReadM SNP 0053.scaffold00196 403117 1 C T - ReadM SNP 0053.scaffold00196 403192 1 C T - ReadM INDEL 0053.scaffold00196 403414 1 T . - ReadM SNP 0053.scaffold00196 403494 1 G A - ReadM SNP 0053.scaffold00196 403540 1 G A - ReadM SNP 0053.scaffold00196 403627 1 T A - ReadM SNP 0053.scaffold00196 403725 1 T A - ReadM SNP 0053.scaffold00196 403755 1 T C - ReadM SNP 0053.scaffold00196 403814 1 C T - ReadM SNP 0053.scaffold00196 403822 1 A G - ReadM SNP 0053.scaffold00196 403933 1 C T - ReadM SNP 0053.scaffold00196 403998 1 A G - ReadM SNP 0053.scaffold00196 404195 1 A T - Both SNP 0053.scaffold00196 404491 1 G A scaffold9740 Both SNP 0053.scaffold00196 404522 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 404648 2 CA TG scaffold9740 ScafM SNP 0053.scaffold00196 404679 1 T A scaffold9740 ScafM INDEL 0053.scaffold00196 404692 1 G . scaffold9740 Both SNP 0053.scaffold00196 404734 1 C G scaffold9740 Both SNP 0053.scaffold00196 404743 1 T A scaffold9740 ReadM SNP 0053.scaffold00196 404816 1 A G - ReadM SNP 0053.scaffold00196 404831 1 G C - ReadM INDEL 0053.scaffold00196 404892 1 T . - ReadM SNP 0053.scaffold00196 404948 1 A T - ScafM SNP 0053.scaffold00196 405072 1 C T scaffold9740 Both SNP 0053.scaffold00196 405108 1 T C scaffold9740 Both SNP 0053.scaffold00196 405126 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 405147 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 405152 1 A G scaffold9740 ScafM SNP 0053.scaffold00196 405167 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 405172 1 T C scaffold9740 Both SNP 0053.scaffold00196 405373 1 T C scaffold9740 Both SNP 0053.scaffold00196 405508 1 A T scaffold9740 Both SNP 0053.scaffold00196 405539 1 G A scaffold9740 ScafM SNP 0053.scaffold00196 405568 1 G A scaffold9740 ScafM SNP 0053.scaffold00196 405610 1 A T scaffold9740 ScafM SNP 0053.scaffold00196 405612 1 A T scaffold9740 ScafM INDEL 0053.scaffold00196 405613 1 . A scaffold9740 ScafM SNP 0053.scaffold00196 405651 1 T G scaffold9740 Both SNP 0053.scaffold00196 405676 1 G C scaffold9740 Both SNP 0053.scaffold00196 405679 1 C G scaffold9740 Both SNP 0053.scaffold00196 406069 2 CT AG scaffold9740 Both SNP 0053.scaffold00196 406093 1 T C scaffold9740 Both SNP 0053.scaffold00196 406114 1 C T scaffold9740 Both SNP 0053.scaffold00196 406144 1 A T scaffold9740 Both SNP 0053.scaffold00196 406211 1 A G scaffold9740 ScafM SNP 0053.scaffold00196 406258 1 C T scaffold9740 ScafM INDEL 0053.scaffold00196 406333 32 ................................ TACCTGGTGGTTACTGGATTCTTTCTGGACCT scaffold9740 ScafM INDEL 0053.scaffold00196 406368 1 . T scaffold9740 ScafM SNP 0053.scaffold00196 406376 2 AC GT scaffold9740 Both SNP 0053.scaffold00196 406416 1 T G scaffold9740 Both SNP 0053.scaffold00196 406608 1 C A scaffold9740 ScafM SNP 0053.scaffold00196 406758 1 T A scaffold9740 ScafM SNP 0053.scaffold00196 406764 1 G T scaffold9740 Both SNP 0053.scaffold00196 406911 1 G T scaffold9740 ScafM SNP 0053.scaffold00196 406946 1 G A scaffold9740 ScafM SNP 0053.scaffold00196 406950 1 T C scaffold9740 ScafM SNP 0053.scaffold00196 406988 1 T G scaffold9740 Both SNP 0053.scaffold00196 407195 1 A C scaffold9740 Both SNP 0053.scaffold00196 407266 1 A G scaffold9740 Both SNP 0053.scaffold00196 407338 1 T A scaffold9740 Both SNP 0053.scaffold00196 407344 1 T C scaffold9740 ScafM SNP 0053.scaffold00196 407700 1 T C scaffold9740 ScafM SNP 0053.scaffold00196 407719 1 T C scaffold9740 ScafM SNP 0053.scaffold00196 407740 1 C T scaffold9740 ScafM SNP 0053.scaffold00196 407836 1 C T scaffold9740 ScafM INDEL 0053.scaffold00196 407965 3 ... TAT scaffold9740 ScafM SNP 0053.scaffold00196 407985 1 G T scaffold9740 ScafM SNP 0053.scaffold00196 407987 1 G A scaffold9740 ReadM SNP 0053.scaffold00196 409921 1 A T - ReadM SNP 0053.scaffold00196 410754 1 T C - ReadM INDEL 0053.scaffold00196 410769 1 . A - ReadM SNP 0053.scaffold00196 410860 1 G A - ReadM SNP 0053.scaffold00196 411196 1 T G - ReadM SNP 0053.scaffold00196 411365 1 G A - ReadM SNP 0053.scaffold00196 411719 1 G T - ReadM SNP 0053.scaffold00196 411940 1 A G - ReadM SNP 0053.scaffold00196 412096 1 A G - ScafM SNP 0053.scaffold00196 412354 1 A G scaffold27716 Both SNP 0053.scaffold00196 412456 1 T A scaffold27716 ReadM SNP 0053.scaffold00196 412748 1 G T - ReadM SNP 0053.scaffold00196 412875 1 G A - ReadM SNP 0053.scaffold00196 412916 1 G A - ReadM SNP 0053.scaffold00196 413032 1 T G - ReadM SNP 0053.scaffold00196 413099 1 A T - ScafM SNP 0053.scaffold00196 414953 1 A C scaffold6266 ScafM INDEL 0053.scaffold00196 414959 8 ........ AGAAACAG scaffold6266 ScafM INDEL 0053.scaffold00196 414969 3 ... ACT scaffold6266 ScafM INDEL 0053.scaffold00196 414992 5 ..... TTTGA scaffold6266 ScafM SNP 0053.scaffold00196 414999 1 A G scaffold6266 ScafM SNP 0053.scaffold00196 415004 1 C T scaffold6266 ScafM INDEL 0053.scaffold00196 415044 1 T . scaffold6266 ScafM INDEL 0053.scaffold00196 415072 3 TGA ... scaffold6266 ScafM SNP 0053.scaffold00196 415093 1 T C scaffold6266 ScafM SNP 0053.scaffold00196 415096 1 C A scaffold6266 ScafM SNP 0053.scaffold00196 415138 1 T A scaffold6266 ScafM SNP 0053.scaffold00196 415156 1 T C scaffold6266 Both SNP 0053.scaffold00196 415165 1 G A scaffold6266 ScafM SNP 0053.scaffold00196 415169 1 T C scaffold6266 ScafM SNP 0053.scaffold00196 415207 1 G C scaffold6266 ScafM SNP 0053.scaffold00196 415216 1 T A scaffold6266 ScafM SNP 0053.scaffold00196 415220 2 AG GA scaffold6266 ReadM SNP 0053.scaffold00196 415221 1 G A - ScafM SNP 0053.scaffold00196 415233 2 TC CT scaffold6266 ReadM SNP 0053.scaffold00196 415304 1 C T - ReadM SNP 0053.scaffold00196 415549 1 T C - ReadM SNP 0053.scaffold00196 415919 1 T C - ReadM SNP 0053.scaffold00196 415961 1 T G - ReadM SNP 0053.scaffold00196 416105 1 T C - ReadM SNP 0053.scaffold00196 416198 1 T C - ReadM SNP 0053.scaffold00196 416648 1 T A - ReadM SNP 0053.scaffold00196 416766 1 C T - ReadM SNP 0053.scaffold00196 416799 1 T C - ReadM SNP 0053.scaffold00196 417022 1 G A - ReadM SNP 0053.scaffold00196 417080 1 T C - ReadM SNP 0053.scaffold00196 417106 1 A G - ReadM SNP 0053.scaffold00196 417112 1 A G - ReadM SNP 0053.scaffold00196 417175 1 G C - ReadM SNP 0053.scaffold00196 417200 1 A G - ReadM SNP 0053.scaffold00196 417230 1 T C - Both SNP 0053.scaffold00196 417527 1 T C scaffold17204 Both SNP 0053.scaffold00196 417546 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 417855 1 . T scaffold17204 ScafM INDEL 0053.scaffold00196 417877 4 .... TATC scaffold17204 Both SNP 0053.scaffold00196 417934 1 A G scaffold17204 Both SNP 0053.scaffold00196 418111 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 418166 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 418196 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 418253 2 GG TA scaffold17204 Both SNP 0053.scaffold00196 418316 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 418411 3 GTT TAC scaffold17204 Both SNP 0053.scaffold00196 418448 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 418492 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 418519 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 418539 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 418546 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 418551 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 418653 2 CT AA scaffold17204 Both SNP 0053.scaffold00196 418775 1 A C scaffold17204 Both SNP 0053.scaffold00196 418988 1 T C scaffold17204 Both SNP 0053.scaffold00196 419156 1 A G scaffold17204 Both SNP 0053.scaffold00196 419167 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 419206 1 C A scaffold17204 ScafM INDEL 0053.scaffold00196 419434 1 . A scaffold17204 ScafM SNP 0053.scaffold00196 419436 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 419470 1 G T scaffold17204 ScafM INDEL 0053.scaffold00196 419477 2 AT .. scaffold17204 ReadM SNP 0053.scaffold00196 419545 1 T C - Both SNP 0053.scaffold00196 419584 1 T C scaffold17204 Both SNP 0053.scaffold00196 419603 1 A G scaffold17204 Both SNP 0053.scaffold00196 419660 1 A C scaffold17204 Both SNP 0053.scaffold00196 419806 1 G C scaffold17204 Both SNP 0053.scaffold00196 419847 1 G C scaffold17204 Both SNP 0053.scaffold00196 419897 1 C A scaffold17204 Both SNP 0053.scaffold00196 419984 1 T C scaffold17204 Both SNP 0053.scaffold00196 420041 1 A C scaffold17204 Both SNP 0053.scaffold00196 420109 1 C T scaffold17204 Both INDEL 0053.scaffold00196 420167 1 A . scaffold17204 Both SNP 0053.scaffold00196 420191 1 C T scaffold17204 Both SNP 0053.scaffold00196 420195 1 T A scaffold17204 Both SNP 0053.scaffold00196 420364 1 A G scaffold17204 Both SNP 0053.scaffold00196 420403 1 G A scaffold17204 Both SNP 0053.scaffold00196 420548 1 T C scaffold17204 Both SNP 0053.scaffold00196 420560 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 420700 2 TT AC scaffold17204 Both SNP 0053.scaffold00196 420810 1 A T scaffold17204 Both SNP 0053.scaffold00196 420871 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 420947 4 ACAT .... scaffold17204 ScafM SNP 0053.scaffold00196 421080 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 421113 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 421133 1 G T scaffold17204 Both SNP 0053.scaffold00196 421233 1 T C scaffold17204 Both SNP 0053.scaffold00196 421240 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 421279 1 A T scaffold17204 ReadM SNP 0053.scaffold00196 421381 1 T C - ReadM SNP 0053.scaffold00196 421463 1 G A - ReadM SNP 0053.scaffold00196 421791 1 A G - ReadM SNP 0053.scaffold00196 421869 1 G T - ScafM SNP 0053.scaffold00196 422473 1 A G scaffold17204 ReadM SNP 0053.scaffold00196 422782 1 G T - ReadM SNP 0053.scaffold00196 423196 1 G A - ReadM SNP 0053.scaffold00196 423276 1 G A - ReadM SNP 0053.scaffold00196 423342 1 G A - ReadM SNP 0053.scaffold00196 423374 1 G A - ReadM SNP 0053.scaffold00196 423488 1 G A - ReadM SNP 0053.scaffold00196 423604 1 C A - ReadM SNP 0053.scaffold00196 423740 1 A G - ReadM SNP 0053.scaffold00196 423814 1 T C - ReadM SNP 0053.scaffold00196 423885 1 C T - ReadM SNP 0053.scaffold00196 424023 1 A T - ReadM SNP 0053.scaffold00196 424046 1 G T - ReadM SNP 0053.scaffold00196 424086 1 C T - ReadM SNP 0053.scaffold00196 424124 1 C T - ReadM SNP 0053.scaffold00196 424145 1 G T - ReadM SNP 0053.scaffold00196 424243 1 C G - ReadM SNP 0053.scaffold00196 424371 1 T C - ReadM SNP 0053.scaffold00196 424418 1 T G - ReadM SNP 0053.scaffold00196 424493 1 C A - ReadM SNP 0053.scaffold00196 424506 1 C T - ReadM SNP 0053.scaffold00196 424521 1 C T - ReadM SNP 0053.scaffold00196 424600 1 T C - ReadM SNP 0053.scaffold00196 424614 1 C A - ReadM SNP 0053.scaffold00196 424628 1 C T - ReadM SNP 0053.scaffold00196 424712 1 G A - ReadM SNP 0053.scaffold00196 424737 1 A G - ReadM SNP 0053.scaffold00196 424921 1 T C - ReadM SNP 0053.scaffold00196 425252 1 A G - ReadM INDEL 0053.scaffold00196 425323 1 . A - ReadM SNP 0053.scaffold00196 425331 1 G A - ReadM SNP 0053.scaffold00196 425434 1 A G - ReadM SNP 0053.scaffold00196 425536 1 C A - ReadM SNP 0053.scaffold00196 425651 1 T C - ReadM SNP 0053.scaffold00196 425920 1 C A - ReadM SNP 0053.scaffold00196 426225 1 A C - ReadM SNP 0053.scaffold00196 439911 1 C G - ReadM SNP 0053.scaffold00196 439977 1 A T - ReadM SNP 0053.scaffold00196 440193 1 A G - ReadM SNP 0053.scaffold00196 440380 1 C T - ScafM SNP 0053.scaffold00196 440762 1 A C scaffold17204 ScafM INDEL 0053.scaffold00196 441035 6 ...... ATTGAG scaffold17204 ScafM SNP 0053.scaffold00196 441142 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 441191 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 441202 1 A G scaffold17204 Both SNP 0053.scaffold00196 441398 1 T C scaffold17204 Both SNP 0053.scaffold00196 441445 1 G C scaffold17204 Both SNP 0053.scaffold00196 441452 1 G A scaffold17204 Both SNP 0053.scaffold00196 441491 1 C T scaffold17204 ReadM SNP 0053.scaffold00196 441559 1 T C - ScafM SNP 0053.scaffold00196 441615 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 441622 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 441663 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 441669 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 441687 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 441690 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 441704 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 441712 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 441737 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 441779 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 441823 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 441832 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 441895 1 G T scaffold17204 ScafM INDEL 0053.scaffold00196 441901 1 . A scaffold17204 ScafM SNP 0053.scaffold00196 441985 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 441998 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 442210 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 442226 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 442242 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 442254 2 GC TT scaffold17204 ScafM INDEL 0053.scaffold00196 442274 2 CT .. scaffold17204 ScafM INDEL 0053.scaffold00196 442277 2 AC .. scaffold17204 ScafM SNP 0053.scaffold00196 442293 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 442322 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 442327 1 A . scaffold17204 ScafM SNP 0053.scaffold00196 442355 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 442377 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 442401 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 442477 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 442502 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 442504 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 442508 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 442540 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 442553 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 442559 1 G A scaffold17204 Both SNP 0053.scaffold00196 442735 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 442835 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 442870 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 442885 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 442890 1 T . scaffold17204 ScafM SNP 0053.scaffold00196 443374 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 443410 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 443422 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 443426 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 443444 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 443536 1 G A scaffold17204 Both SNP 0053.scaffold00196 443561 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 443646 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 443672 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 443695 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 443710 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 443722 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 443770 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 443778 1 C T scaffold17204 ScafM INDEL 0053.scaffold00196 443797 19 ................... GCGCGGGGGGGGGGGGGGG scaffold17204 ScafM SNP 0053.scaffold00196 443805 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 443840 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 443868 2 CA TG scaffold17204 ScafM SNP 0053.scaffold00196 443877 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 443897 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 443927 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 443934 1 C T scaffold17204 ScafM INDEL 0053.scaffold00196 443953 3 GAG ... scaffold17204 ScafM SNP 0053.scaffold00196 443978 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 444010 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 444025 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 444041 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 444071 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 444104 2 AC TT scaffold17204 ScafM SNP 0053.scaffold00196 444127 2 TG AA scaffold17204 ScafM SNP 0053.scaffold00196 444183 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 444230 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 444244 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 444247 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 444288 1 C A scaffold17204 ScafM INDEL 0053.scaffold00196 444307 2 AT .. scaffold17204 ScafM SNP 0053.scaffold00196 444330 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 444345 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 444400 1 T G scaffold17204 ScafM INDEL 0053.scaffold00196 444418 1 . A scaffold17204 ScafM SNP 0053.scaffold00196 444437 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 444454 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 444459 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 444487 1 A G scaffold17204 ScafM INDEL 0053.scaffold00196 444494 4 .... AACA scaffold17204 ScafM SNP 0053.scaffold00196 444497 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 444509 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 444596 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 444598 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 444618 2 .G AA scaffold17204 ScafM SNP 0053.scaffold00196 444645 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 444657 2 TT .C scaffold17204 ScafM SNP 0053.scaffold00196 444707 1 A C scaffold17204 Both SNP 0053.scaffold00196 444724 1 A G scaffold17204 Both SNP 0053.scaffold00196 444746 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 444841 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 444851 1 C T scaffold17204 ScafM INDEL 0053.scaffold00196 444876 1 . C scaffold17204 ScafM SNP 0053.scaffold00196 444893 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 444929 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 444933 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 444950 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 444985 4 GTTT .AAC scaffold17204 Both SNP 0053.scaffold00196 445109 1 A C scaffold17204 ReadM INDEL 0053.scaffold00196 445188 1 . A - ReadM SNP 0053.scaffold00196 445223 1 A C - Both SNP 0053.scaffold00196 445770 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 445839 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 445847 5 GTAGG ..... scaffold17204 ScafM INDEL 0053.scaffold00196 445853 2 AG .. scaffold17204 ScafM INDEL 0053.scaffold00196 445877 1 . G scaffold17204 ScafM INDEL 0053.scaffold00196 445908 1 A . scaffold17204 ScafM INDEL 0053.scaffold00196 445913 1 . C scaffold17204 ScafM SNP 0053.scaffold00196 445943 3 TTG CCA scaffold17204 ScafM SNP 0053.scaffold00196 445949 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 445968 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 445992 1 . A scaffold17204 ScafM SNP 0053.scaffold00196 445994 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 445997 1 A G scaffold17204 ScafM INDEL 0053.scaffold00196 446047 1 A . scaffold17204 ScafM SNP 0053.scaffold00196 446049 1 A T scaffold17204 ReadM SNP 0053.scaffold00196 446141 1 A C - ReadM SNP 0053.scaffold00196 446176 1 T A - ReadM SNP 0053.scaffold00196 446182 1 C T - ReadM SNP 0053.scaffold00196 446353 1 A C - ReadM SNP 0053.scaffold00196 446366 1 T C - Both SNP 0053.scaffold00196 446443 1 A G scaffold17204 Both SNP 0053.scaffold00196 446457 1 T C scaffold17204 Both INDEL 0053.scaffold00196 446482 1 C . scaffold17204 ScafM INDEL 0053.scaffold00196 446501 8 ........ AGGCTGCA scaffold17204 ScafM SNP 0053.scaffold00196 446517 1 A T scaffold17204 Both SNP 0053.scaffold00196 446538 1 G T scaffold17204 Both SNP 0053.scaffold00196 446571 1 C T scaffold17204 Both SNP 0053.scaffold00196 446600 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 446652 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 446660 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 446673 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 446692 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 446694 1 A T scaffold17204 Both SNP 0053.scaffold00196 446742 1 A G scaffold17204 Both SNP 0053.scaffold00196 446769 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 446808 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 446820 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 446830 1 A . scaffold17204 ScafM SNP 0053.scaffold00196 446834 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 446858 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 446868 1 G T scaffold17204 Both INDEL 0053.scaffold00196 446890 1 G . scaffold17204 Both SNP 0053.scaffold00196 446924 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 446993 2 .. TG scaffold17204 ScafM SNP 0053.scaffold00196 447002 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 447026 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 447041 1 C G scaffold17204 ScafM INDEL 0053.scaffold00196 447057 2 .. GT scaffold17204 ScafM INDEL 0053.scaffold00196 447062 1 . C scaffold17204 ScafM SNP 0053.scaffold00196 447064 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 447066 1 C T scaffold17204 ScafM INDEL 0053.scaffold00196 447076 5 ..... TGGGG scaffold17204 ScafM SNP 0053.scaffold00196 447078 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447080 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447082 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447084 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447088 1 T G scaffold17204 ScafM INDEL 0053.scaffold00196 447101 1 . T scaffold17204 ScafM SNP 0053.scaffold00196 447122 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 447147 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 447159 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 447164 6 ...... TTATTG scaffold17204 ScafM INDEL 0053.scaffold00196 447184 2 GG .. scaffold17204 ScafM SNP 0053.scaffold00196 447194 1 A G scaffold17204 Both SNP 0053.scaffold00196 447249 1 T C scaffold17204 Both INDEL 0053.scaffold00196 447260 1 . T scaffold17204 ScafM SNP 0053.scaffold00196 447338 2 CG TA scaffold17204 ScafM SNP 0053.scaffold00196 447341 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 447361 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 447364 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447378 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 447409 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 447414 1 C T scaffold17204 Both INDEL 0053.scaffold00196 447449 1 . T scaffold17204 Both SNP 0053.scaffold00196 447469 1 G C scaffold17204 Both SNP 0053.scaffold00196 447488 1 C T scaffold17204 Both SNP 0053.scaffold00196 447560 1 C A scaffold17204 Both SNP 0053.scaffold00196 447756 1 A G scaffold17204 Both SNP 0053.scaffold00196 447779 1 G C scaffold17204 Both SNP 0053.scaffold00196 447796 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 447834 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 447861 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 447868 1 A G scaffold17204 ScafM INDEL 0053.scaffold00196 447875 2 .. GC scaffold17204 ScafM SNP 0053.scaffold00196 447890 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 447895 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 447901 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 447910 1 T C scaffold17204 Both SNP 0053.scaffold00196 447935 1 G T scaffold17204 Both SNP 0053.scaffold00196 447949 1 C T scaffold17204 Both SNP 0053.scaffold00196 448013 1 G C scaffold17204 Both SNP 0053.scaffold00196 448050 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 448068 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 448074 1 G A scaffold17204 Both SNP 0053.scaffold00196 448099 1 G A scaffold17204 Both SNP 0053.scaffold00196 448164 1 G T scaffold17204 Both SNP 0053.scaffold00196 448176 1 A G scaffold17204 ReadM SNP 0053.scaffold00196 448327 1 G A - ReadM SNP 0053.scaffold00196 448335 1 A T - ScafM SNP 0053.scaffold00196 448439 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 448450 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 448494 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 448512 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 448515 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 448531 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 448534 2 GT .. scaffold17204 ScafM SNP 0053.scaffold00196 448570 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 448799 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 448832 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 448844 3 TGA CAG scaffold17204 ScafM SNP 0053.scaffold00196 448854 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 448885 2 TG AA scaffold17204 ScafM SNP 0053.scaffold00196 448902 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 448905 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 448930 1 A T scaffold17204 ScafM INDEL 0053.scaffold00196 448968 1 . G scaffold17204 ScafM SNP 0053.scaffold00196 448998 3 AGC TTG scaffold17204 ScafM SNP 0053.scaffold00196 449006 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 449018 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 449061 1 T A scaffold17204 ScafM INDEL 0053.scaffold00196 449090 1 C . scaffold17204 ScafM SNP 0053.scaffold00196 449098 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449103 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 449108 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 449143 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449146 2 AC GT scaffold17204 ScafM SNP 0053.scaffold00196 449154 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 449156 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 449167 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 449340 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 449349 2 TA CC scaffold17204 ScafM SNP 0053.scaffold00196 449365 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 449413 2 TG GA scaffold17204 ScafM SNP 0053.scaffold00196 449433 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 449448 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 449495 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 449502 2 AC TT scaffold17204 ScafM SNP 0053.scaffold00196 449526 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 449571 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449590 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 449611 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449623 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 449626 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 449634 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 449637 1 G C scaffold17204 ScafM SNP 0053.scaffold00196 449641 2 AT CC scaffold17204 ScafM SNP 0053.scaffold00196 449647 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 449658 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 449661 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449673 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 449679 1 C G scaffold17204 ScafM INDEL 0053.scaffold00196 449681 6 ...... GTAAAA scaffold17204 ScafM INDEL 0053.scaffold00196 449685 6 ...... AACCCA scaffold17204 ScafM INDEL 0053.scaffold00196 449686 1 . T scaffold17204 ScafM INDEL 0053.scaffold00196 449689 4 .... GATC scaffold17204 ScafM SNP 0053.scaffold00196 449699 1 C G scaffold17204 ScafM SNP 0053.scaffold00196 449750 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 449752 2 GC AT scaffold17204 ScafM SNP 0053.scaffold00196 449764 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 449819 1 T A scaffold17204 ScafM INDEL 0053.scaffold00196 449821 2 TG .. scaffold17204 ScafM SNP 0053.scaffold00196 449838 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 453110 1 G A scaffold14627 ScafM SNP 0053.scaffold00196 453118 1 T C scaffold14627 ScafM SNP 0053.scaffold00196 453198 2 TT AA scaffold14627 ScafM SNP 0053.scaffold00196 453227 1 C G scaffold14627 ScafM SNP 0053.scaffold00196 453240 1 A G scaffold14627 ScafM SNP 0053.scaffold00196 453242 2 AT TC scaffold14627 ScafM SNP 0053.scaffold00196 453248 1 A T scaffold14627 ScafM SNP 0053.scaffold00196 453256 1 A G scaffold14627 ScafM SNP 0053.scaffold00196 453267 1 T G scaffold14627 ScafM SNP 0053.scaffold00196 453305 1 T C scaffold14627 ScafM SNP 0053.scaffold00196 453311 1 T C scaffold14627 ScafM SNP 0053.scaffold00196 453335 1 G A scaffold14627 ScafM SNP 0053.scaffold00196 453370 1 C G scaffold14627 ScafM SNP 0053.scaffold00196 457778 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 457781 1 C G scaffold17204 ScafM INDEL 0053.scaffold00196 457838 1 . T scaffold17204 ScafM SNP 0053.scaffold00196 457847 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 457877 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 457926 25 ......................... GGGTGATGTGCACTTAGTAATCTGA scaffold17204 ScafM SNP 0053.scaffold00196 457936 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 457960 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 457966 1 A G scaffold17204 ScafM INDEL 0053.scaffold00196 457978 6 .GAAGG CCCCTA scaffold17204 ScafM SNP 0053.scaffold00196 457987 1 T A scaffold17204 ScafM INDEL 0053.scaffold00196 457988 4 .... CCCA scaffold17204 ScafM INDEL 0053.scaffold00196 457989 6 ...... ATCACA scaffold17204 ScafM SNP 0053.scaffold00196 458008 1 G T scaffold17204 ScafM SNP 0053.scaffold00196 458014 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 458027 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 458042 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 458052 9 CAAGGGTAG ......... scaffold17204 ScafM INDEL 0053.scaffold00196 458110 1 T . scaffold17204 ScafM SNP 0053.scaffold00196 458112 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 458762 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 458767 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 458781 1 A T scaffold17204 ScafM INDEL 0053.scaffold00196 458814 3 ... TTT scaffold17204 ScafM SNP 0053.scaffold00196 458816 1 C T scaffold17204 ScafM INDEL 0053.scaffold00196 458819 4 .... GACA scaffold17204 ScafM INDEL 0053.scaffold00196 458820 2 .. GA scaffold17204 ScafM SNP 0053.scaffold00196 458823 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 458824 1 . A scaffold17204 ScafM SNP 0053.scaffold00196 458829 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 458874 1 T C scaffold17204 ScafM INDEL 0053.scaffold00196 458883 1 T . scaffold17204 ScafM SNP 0053.scaffold00196 458886 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 458907 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 458924 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 458928 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 458960 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 458966 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 459016 1 C T scaffold17204 Both SNP 0053.scaffold00196 459022 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 459113 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 459121 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 459123 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 459141 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 459162 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 459166 1 T G scaffold17204 ScafM INDEL 0053.scaffold00196 459171 1 . G scaffold17204 ScafM SNP 0053.scaffold00196 459173 2 TT AG scaffold17204 ScafM SNP 0053.scaffold00196 459231 1 T G scaffold17204 ScafM SNP 0053.scaffold00196 459247 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 459367 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 459376 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 459403 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 459408 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 459425 1 T A scaffold17204 ScafM SNP 0053.scaffold00196 459439 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 459445 1 A C scaffold17204 Both SNP 0053.scaffold00196 459504 1 A C scaffold17204 Both SNP 0053.scaffold00196 459516 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 459574 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 459578 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 459582 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 459599 1 A C scaffold17204 Both SNP 0053.scaffold00196 459637 1 G C scaffold17204 Both SNP 0053.scaffold00196 459641 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 459703 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 459707 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 459732 1 G A scaffold17204 Both SNP 0053.scaffold00196 459741 1 G A scaffold17204 Both SNP 0053.scaffold00196 459752 1 C A scaffold17204 Both INDEL 0053.scaffold00196 459818 1 . A scaffold17204 Both SNP 0053.scaffold00196 459863 1 G T scaffold17204 Both SNP 0053.scaffold00196 459870 1 C T scaffold17204 Both SNP 0053.scaffold00196 459997 1 G A scaffold17204 Both SNP 0053.scaffold00196 460001 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 460024 1 A G scaffold17204 ScafM INDEL 0053.scaffold00196 460032 2 .. AA scaffold17204 ScafM INDEL 0053.scaffold00196 460033 9 ......... CCCCCCCCC scaffold17204 ScafM SNP 0053.scaffold00196 460038 1 T C scaffold17204 Both SNP 0053.scaffold00196 460074 1 A G scaffold17204 Both SNP 0053.scaffold00196 460156 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 460188 1 A C scaffold17204 ScafM SNP 0053.scaffold00196 460192 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 460201 1 C T scaffold17204 Both SNP 0053.scaffold00196 460254 1 G A scaffold17204 Both SNP 0053.scaffold00196 460338 1 C T scaffold17204 Both SNP 0053.scaffold00196 460346 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 460355 1 C T scaffold17204 ScafM SNP 0053.scaffold00196 460377 1 T A scaffold17204 Both SNP 0053.scaffold00196 460404 1 A G scaffold17204 Both INDEL 0053.scaffold00196 460417 1 C . scaffold17204 Both SNP 0053.scaffold00196 460429 1 A G scaffold17204 Both SNP 0053.scaffold00196 460650 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 460672 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 460677 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 460684 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 460688 1 G A scaffold17204 Both SNP 0053.scaffold00196 460704 1 G C scaffold17204 ReadM SNP 0053.scaffold00196 460824 1 A T - ReadM SNP 0053.scaffold00196 460836 1 A G - ReadM SNP 0053.scaffold00196 460908 1 T C - ReadM SNP 0053.scaffold00196 461010 1 T A - Both SNP 0053.scaffold00196 461029 1 A T scaffold17204 ScafM SNP 0053.scaffold00196 461078 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 461089 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 461100 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 461115 1 G A scaffold17204 ScafM SNP 0053.scaffold00196 461121 1 G C scaffold17204 Both SNP 0053.scaffold00196 461163 1 A T scaffold17204 Both SNP 0053.scaffold00196 461200 1 T C scaffold17204 Both SNP 0053.scaffold00196 461285 1 A G scaffold17204 Both SNP 0053.scaffold00196 461320 1 A C scaffold17204 Both SNP 0053.scaffold00196 461330 1 C G scaffold17204 Both SNP 0053.scaffold00196 461383 1 C T scaffold17204 Both SNP 0053.scaffold00196 461417 1 C T scaffold17204 Both INDEL 0053.scaffold00196 461493 1 C . scaffold17204 Both SNP 0053.scaffold00196 461521 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 461545 1 T C scaffold17204 ScafM SNP 0053.scaffold00196 461563 1 T A scaffold17204 ScafM INDEL 0053.scaffold00196 461594 2 AT .. scaffold17204 ScafM INDEL 0053.scaffold00196 461655 5 ..... TGTAA scaffold17204 ScafM INDEL 0053.scaffold00196 461657 2 .. AG scaffold17204 ScafM SNP 0053.scaffold00196 461697 1 G T scaffold17204 ScafM INDEL 0053.scaffold00196 461730 1 . T scaffold17204 ReadM SNP 0053.scaffold00196 461826 1 A T - ReadM SNP 0053.scaffold00196 462049 1 T G - ScafM SNP 0053.scaffold00196 462135 1 C A scaffold17204 ScafM SNP 0053.scaffold00196 462140 1 A G scaffold17204 ScafM SNP 0053.scaffold00196 462177 1 G A scaffold17204 ScafM INDEL 0053.scaffold00196 462187 1 . C scaffold17204 ReadM SNP 0053.scaffold00196 462795 1 A C - ReadM SNP 0053.scaffold00196 462845 1 T C - ReadM SNP 0053.scaffold00196 463140 1 A G - ReadM SNP 0053.scaffold00196 463190 1 G A - ReadM SNP 0053.scaffold00196 463408 1 G C - ReadM INDEL 0053.scaffold00196 463600 1 . A - ReadM SNP 0053.scaffold00196 463619 1 C T - ReadM SNP 0053.scaffold00196 463715 1 T C - ReadM SNP 0053.scaffold00196 463719 1 T C - ReadM SNP 0053.scaffold00196 463888 1 G A - ReadM SNP 0053.scaffold00196 463936 1 A T - ScafM INDEL 0053.scaffold00196 464208 1 A . scaffold17204 ReadM SNP 0053.scaffold00196 464841 1 A G - ReadM SNP 0053.scaffold00196 464880 1 T C - ReadM SNP 0053.scaffold00196 464942 1 G A - ReadM SNP 0053.scaffold00196 464981 1 C T - ReadM SNP 0053.scaffold00196 465005 1 T G - ReadM INDEL 0053.scaffold00196 465482 2 AG .. - ReadM SNP 0053.scaffold00196 465553 1 T C - ScafM SNP 0053.scaffold00196 465675 1 C G scaffold2562 ScafM INDEL 0053.scaffold00196 465721 4 .... TAAG scaffold2562 ScafM SNP 0053.scaffold00196 465760 1 T C scaffold2562 Both INDEL 0053.scaffold00196 465869 1 T . scaffold2562 Both SNP 0053.scaffold00196 465882 1 T C scaffold2562 Both SNP 0053.scaffold00196 465979 1 A G scaffold2562 Both SNP 0053.scaffold00196 465982 1 G A scaffold2562 Both SNP 0053.scaffold00196 466115 1 T C scaffold2562 Both SNP 0053.scaffold00196 466153 1 G A scaffold2562 ScafM SNP 0053.scaffold00196 466160 1 C T scaffold2562 ScafM SNP 0053.scaffold00196 466165 1 A G scaffold2562 Both SNP 0053.scaffold00196 466332 1 C T scaffold2562 Both SNP 0053.scaffold00196 466398 1 A G scaffold2562 Both SNP 0053.scaffold00196 466422 1 C T scaffold2562 Both SNP 0053.scaffold00196 466487 1 G A scaffold2562 Both SNP 0053.scaffold00196 466535 1 G A scaffold2562 Both SNP 0053.scaffold00196 466677 1 G A scaffold2562 Both SNP 0053.scaffold00196 466735 1 T A scaffold2562 Both SNP 0053.scaffold00196 466957 1 A G scaffold2562 Both SNP 0053.scaffold00196 466965 1 A G scaffold2562 Both SNP 0053.scaffold00196 467007 1 G C scaffold2562 Both SNP 0053.scaffold00196 467035 1 A T scaffold2562 Both SNP 0053.scaffold00196 467151 1 G A scaffold2562 Both SNP 0053.scaffold00196 467174 1 A G scaffold2562 Both SNP 0053.scaffold00196 467187 1 C A scaffold2562 Both SNP 0053.scaffold00196 467239 1 T A scaffold2562 Both SNP 0053.scaffold00196 467243 1 C A scaffold2562 Both SNP 0053.scaffold00196 467404 1 A C scaffold2562 Both SNP 0053.scaffold00196 467424 1 A T scaffold2562 Both SNP 0053.scaffold00196 467561 1 G T scaffold2562 Both SNP 0053.scaffold00196 467579 1 G T scaffold2562 Both SNP 0053.scaffold00196 467609 1 C G scaffold2562 ScafM SNP 0053.scaffold00196 467625 1 A G scaffold2562 Both SNP 0053.scaffold00196 467700 1 C A scaffold2562 Both SNP 0053.scaffold00196 467805 1 C T scaffold2562 Both SNP 0053.scaffold00196 467830 1 A C scaffold2562 Both SNP 0053.scaffold00196 467876 1 G A scaffold2562 Both SNP 0053.scaffold00196 468062 1 C G scaffold2562 Both INDEL 0053.scaffold00196 468451 1 . T scaffold2562 Both SNP 0053.scaffold00196 468528 1 A G scaffold2562 ScafM SNP 0053.scaffold00196 468586 1 A T scaffold2562 ScafM SNP 0053.scaffold00196 468590 1 G A scaffold2562 Both SNP 0053.scaffold00196 468648 1 C T scaffold2562 Both SNP 0053.scaffold00196 468707 1 A G scaffold2562 ScafM INDEL 0053.scaffold00196 468764 4 AAAC ...G scaffold2562 Both INDEL 0053.scaffold00196 468827 1 . T scaffold2562 Both SNP 0053.scaffold00196 468885 1 C G scaffold2562 ScafM SNP 0053.scaffold00196 468944 1 T G scaffold2562 ScafM INDEL 0053.scaffold00196 469000 5 ..... TTAAA scaffold2562 ScafM SNP 0053.scaffold00196 469021 1 T G scaffold2562 ScafM SNP 0053.scaffold00196 469027 1 T C scaffold2562 Both SNP 0053.scaffold00196 469071 1 T C scaffold2562 Both INDEL 0053.scaffold00196 469149 2 AA .. scaffold2562 ScafM SNP 0053.scaffold00196 469175 1 C T scaffold2562 Both SNP 0053.scaffold00196 469600 1 A T scaffold2562 Both SNP 0053.scaffold00196 469628 1 T G scaffold2562 ScafM SNP 0053.scaffold00196 469665 1 T G scaffold2562 ScafM INDEL 0053.scaffold00196 469689 5 AGGTG ..... scaffold2562 Both SNP 0053.scaffold00196 469788 1 A C scaffold2562 Both SNP 0053.scaffold00196 469834 1 T C scaffold2562 ScafM SNP 0053.scaffold00196 470119 1 A G scaffold2562 Both SNP 0053.scaffold00196 470199 1 G C scaffold2562 Both SNP 0053.scaffold00196 470252 1 A G scaffold2562 Both SNP 0053.scaffold00196 470350 1 G A scaffold2562 Both SNP 0053.scaffold00196 470381 1 T G scaffold2562 Both SNP 0053.scaffold00196 470433 2 AA TT scaffold2562 Both SNP 0053.scaffold00196 470476 1 A G scaffold2562 Both SNP 0053.scaffold00196 470491 1 G A scaffold2562 Both INDEL 0053.scaffold00196 470596 1 . T scaffold2562 ScafM SNP 0053.scaffold00196 470617 1 A G scaffold2562 ScafM INDEL 0053.scaffold00196 470629 2 GA .. scaffold2562 Both SNP 0053.scaffold00196 470831 1 T C scaffold2562 Both SNP 0053.scaffold00196 470837 1 T C scaffold2562 Both INDEL 0053.scaffold00196 470865 1 A . scaffold2562 Both SNP 0053.scaffold00196 470947 1 T C scaffold2562 Both SNP 0053.scaffold00196 471006 1 A G scaffold2562 ScafM SNP 0053.scaffold00196 471215 1 A G scaffold2562 Both SNP 0053.scaffold00196 471255 1 A G scaffold2562 Both SNP 0053.scaffold00196 471374 1 C T scaffold2562 ScafM SNP 0053.scaffold00196 471529 1 C T scaffold2562 ScafM SNP 0053.scaffold00196 471549 1 A T scaffold2562 ScafM SNP 0053.scaffold00196 471631 1 A G scaffold2562 ReadM SNP 0053.scaffold00196 471816 1 T C - ReadM SNP 0053.scaffold00196 473453 1 G A - ReadM INDEL 0053.scaffold00196 473462 1 A . - ReadM SNP 0053.scaffold00196 473521 1 G A - ReadM SNP 0053.scaffold00196 473573 1 T G - ReadM SNP 0053.scaffold00196 473618 1 A G - ReadM SNP 0053.scaffold00196 473701 1 A T - ReadM SNP 0053.scaffold00196 473750 1 C G - ReadM INDEL 0053.scaffold00196 474016 1 T . - ReadM INDEL 0053.scaffold00196 474913 1 A . - ReadM SNP 0053.scaffold00196 474950 1 T C - ReadM SNP 0053.scaffold00196 474975 1 T C - ReadM SNP 0053.scaffold00196 474996 1 A G - ReadM SNP 0053.scaffold00196 475046 1 C T - ReadM SNP 0053.scaffold00196 475103 1 A C - ReadM SNP 0053.scaffold00196 475134 1 C A - ReadM SNP 0053.scaffold00196 475171 1 C T - ReadM SNP 0053.scaffold00196 475229 1 A G - ReadM SNP 0053.scaffold00196 475322 1 C T - ReadM SNP 0053.scaffold00196 475358 1 C T - ReadM SNP 0053.scaffold00196 475456 1 C T - Both SNP 0053.scaffold00196 475810 1 C A scaffold4182 ReadM INDEL 0053.scaffold00196 475857 1 C . - ReadM SNP 0053.scaffold00196 475913 1 C A - ReadM SNP 0053.scaffold00196 475929 1 G C - ScafM INDEL 0053.scaffold00196 476063 3 ... CAA scaffold4182 ScafM INDEL 0053.scaffold00196 477281 3 ... CTG scaffold4182 ScafM SNP 0053.scaffold00196 477282 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 477299 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 477304 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 477313 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 477608 1 G A scaffold4182 Both SNP 0053.scaffold00196 477698 1 G A scaffold4182 Both SNP 0053.scaffold00196 477749 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 477802 2 GA CT scaffold4182 Both SNP 0053.scaffold00196 478017 1 C G scaffold4182 Both SNP 0053.scaffold00196 478172 1 A C scaffold4182 Both SNP 0053.scaffold00196 478176 1 C T scaffold4182 Both SNP 0053.scaffold00196 478240 1 T C scaffold4182 ReadM SNP 0053.scaffold00196 478357 1 C T - ReadM SNP 0053.scaffold00196 478368 1 T C - Both SNP 0053.scaffold00196 478464 1 A G scaffold4182 Both SNP 0053.scaffold00196 478473 1 G A scaffold4182 ScafM INDEL 0053.scaffold00196 478501 1 G . scaffold4182 ScafM SNP 0053.scaffold00196 478513 1 G A scaffold4182 Both SNP 0053.scaffold00196 478535 1 T C scaffold4182 Both SNP 0053.scaffold00196 478547 1 C T scaffold4182 Both INDEL 0053.scaffold00196 478702 1 . T scaffold4182 ScafM INDEL 0053.scaffold00196 478747 3 ... TTT scaffold4182 Both SNP 0053.scaffold00196 478774 1 G A scaffold4182 Both SNP 0053.scaffold00196 478871 1 A T scaffold4182 Both SNP 0053.scaffold00196 478882 1 T G scaffold4182 Both SNP 0053.scaffold00196 478906 1 C T scaffold4182 Both SNP 0053.scaffold00196 479040 1 T A scaffold4182 ReadM SNP 0053.scaffold00196 479087 1 C T - Both SNP 0053.scaffold00196 479121 1 C T scaffold4182 Both SNP 0053.scaffold00196 479139 1 T C scaffold4182 Both SNP 0053.scaffold00196 479165 1 A G scaffold4182 Both INDEL 0053.scaffold00196 479262 1 T . scaffold4182 Both SNP 0053.scaffold00196 479311 1 T C scaffold4182 Both INDEL 0053.scaffold00196 479647 1 A . scaffold4182 Both SNP 0053.scaffold00196 479693 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 479863 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 479977 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 480394 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 480488 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 480508 4 .... GAGA scaffold4182 Both INDEL 0053.scaffold00196 480705 1 T . scaffold4182 Both SNP 0053.scaffold00196 480759 1 C T scaffold4182 Both SNP 0053.scaffold00196 480817 1 G A scaffold4182 Both SNP 0053.scaffold00196 480856 1 G A scaffold4182 Both SNP 0053.scaffold00196 480877 1 G C scaffold4182 ReadM SNP 0053.scaffold00196 481209 1 G C - ReadM SNP 0053.scaffold00196 481241 1 G T - ReadM SNP 0053.scaffold00196 481323 1 A G - ScafM INDEL 0053.scaffold00196 481361 2 AA .. scaffold4182 ScafM INDEL 0053.scaffold00196 481380 6 ...... ACACAC scaffold4182 ScafM SNP 0053.scaffold00196 481382 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 481401 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 481406 1 C T scaffold4182 Both SNP 0053.scaffold00196 481501 1 T A scaffold4182 Both SNP 0053.scaffold00196 481903 1 G A scaffold4182 Both SNP 0053.scaffold00196 481917 1 A G scaffold4182 Both SNP 0053.scaffold00196 481950 1 A T scaffold4182 ReadM SNP 0053.scaffold00196 482037 1 A T - ReadM SNP 0053.scaffold00196 482051 1 T G - ReadM SNP 0053.scaffold00196 482091 1 G A - ScafM INDEL 0053.scaffold00196 482152 1 . A scaffold4182 Both SNP 0053.scaffold00196 482196 1 G A scaffold4182 Both SNP 0053.scaffold00196 482261 1 G T scaffold4182 Both SNP 0053.scaffold00196 482270 1 C T scaffold4182 Both SNP 0053.scaffold00196 482358 1 T A scaffold4182 ReadM SNP 0053.scaffold00196 482620 1 T G - ReadM SNP 0053.scaffold00196 482961 1 T C - ReadM SNP 0053.scaffold00196 483057 1 G A - ReadM SNP 0053.scaffold00196 483095 1 T C - ReadM SNP 0053.scaffold00196 483164 1 T C - Both SNP 0053.scaffold00196 483495 1 T G scaffold4182 Both SNP 0053.scaffold00196 483517 1 C G scaffold4182 Both SNP 0053.scaffold00196 483691 1 T G scaffold4182 Both INDEL 0053.scaffold00196 483732 1 . A scaffold4182 Both SNP 0053.scaffold00196 483776 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 483810 26 .......................... TGCATTTGGTCGTTCCAGTTCGTGGT scaffold4182 ScafM SNP 0053.scaffold00196 483818 1 C G scaffold4182 Both SNP 0053.scaffold00196 483970 1 T C scaffold4182 Both SNP 0053.scaffold00196 484141 1 A G scaffold4182 Both SNP 0053.scaffold00196 484202 1 A C scaffold4182 Both SNP 0053.scaffold00196 484211 1 A G scaffold4182 Both SNP 0053.scaffold00196 484234 1 T G scaffold4182 Both SNP 0053.scaffold00196 484254 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 484270 1 A T scaffold4182 Both INDEL 0053.scaffold00196 484323 3 ... CTT scaffold4182 Both SNP 0053.scaffold00196 484405 1 G T scaffold4182 Both SNP 0053.scaffold00196 484411 1 T C scaffold4182 Both SNP 0053.scaffold00196 484540 1 T C scaffold4182 Both SNP 0053.scaffold00196 484782 1 C G scaffold4182 Both SNP 0053.scaffold00196 484845 1 C T scaffold4182 Both SNP 0053.scaffold00196 485078 1 T C scaffold4182 Both SNP 0053.scaffold00196 485119 1 G A scaffold4182 Both SNP 0053.scaffold00196 485240 1 C T scaffold4182 Both SNP 0053.scaffold00196 485287 1 A G scaffold4182 Both SNP 0053.scaffold00196 485354 1 C T scaffold4182 Both SNP 0053.scaffold00196 485399 1 G A scaffold4182 Both SNP 0053.scaffold00196 485464 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 485635 1 G C scaffold4182 Both SNP 0053.scaffold00196 485741 1 T A scaffold4182 ReadM INDEL 0053.scaffold00196 485769 1 T . - ReadM SNP 0053.scaffold00196 485784 1 G C - ReadM SNP 0053.scaffold00196 485827 1 G T - Both SNP 0053.scaffold00196 486054 1 A G scaffold4182 Both SNP 0053.scaffold00196 486094 1 T C scaffold4182 Both INDEL 0053.scaffold00196 486107 1 G . scaffold4182 Both SNP 0053.scaffold00196 486131 1 T A scaffold4182 Both SNP 0053.scaffold00196 486175 1 A G scaffold4182 Both SNP 0053.scaffold00196 486186 1 A G scaffold4182 Both SNP 0053.scaffold00196 486294 1 T G scaffold4182 ScafM INDEL 0053.scaffold00196 486307 4 TCTC .... scaffold4182 Both INDEL 0053.scaffold00196 486331 1 . G scaffold4182 Both SNP 0053.scaffold00196 486394 1 G A scaffold4182 Both SNP 0053.scaffold00196 486454 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 486483 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 486487 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 486493 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 486508 1 C T scaffold4182 Both SNP 0053.scaffold00196 486599 1 G A scaffold4182 Both SNP 0053.scaffold00196 486610 1 G A scaffold4182 Both SNP 0053.scaffold00196 486663 1 A G scaffold4182 ReadM INDEL 0053.scaffold00196 487000 2 .. GG - ReadM INDEL 0053.scaffold00196 487002 2 .. GT - ReadM SNP 0053.scaffold00196 487082 1 T C - ReadM SNP 0053.scaffold00196 487122 1 T C - Both SNP 0053.scaffold00196 487210 1 A C scaffold4182 Both SNP 0053.scaffold00196 487271 1 A G scaffold4182 Both SNP 0053.scaffold00196 487397 1 G A scaffold4182 Both SNP 0053.scaffold00196 487461 1 C G scaffold4182 Both SNP 0053.scaffold00196 487622 1 G A scaffold4182 Both SNP 0053.scaffold00196 487690 1 G C scaffold4182 ReadM SNP 0053.scaffold00196 488020 1 G A - Both SNP 0053.scaffold00196 488087 1 C T scaffold4182 Both SNP 0053.scaffold00196 488101 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 488192 20 TAAGATACATACTTATTTGA .................... scaffold4182 ScafM SNP 0053.scaffold00196 488346 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 488479 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 488489 3 ... TTT scaffold4182 ScafM SNP 0053.scaffold00196 488490 1 C T scaffold4182 Both SNP 0053.scaffold00196 488618 1 G A scaffold4182 Both SNP 0053.scaffold00196 488863 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 489045 8 TACTTTTG ........ scaffold4182 Both SNP 0053.scaffold00196 489106 1 T C scaffold4182 Both SNP 0053.scaffold00196 489141 1 G C scaffold4182 ScafM INDEL 0053.scaffold00196 489491 3 TTC ... scaffold4182 ScafM SNP 0053.scaffold00196 489496 1 C T scaffold4182 ReadM SNP 0053.scaffold00196 489572 1 C A - ReadM SNP 0053.scaffold00196 489674 1 A G - ScafM INDEL 0053.scaffold00196 489844 7 GACTCTG ....... scaffold4182 Both SNP 0053.scaffold00196 489914 1 T A scaffold4182 Both SNP 0053.scaffold00196 490059 1 A G scaffold4182 Both SNP 0053.scaffold00196 490106 1 A G scaffold4182 Both SNP 0053.scaffold00196 490151 1 T G scaffold4182 Both SNP 0053.scaffold00196 490184 1 C G scaffold4182 Both SNP 0053.scaffold00196 490220 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 490270 2 .. TT scaffold4182 Both SNP 0053.scaffold00196 490392 1 T C scaffold4182 Both SNP 0053.scaffold00196 490533 1 C T scaffold4182 Both SNP 0053.scaffold00196 490609 1 A T scaffold4182 ReadM SNP 0053.scaffold00196 490684 1 C T - ReadM SNP 0053.scaffold00196 490730 1 T C - ReadM INDEL 0053.scaffold00196 490761 1 G . - Both SNP 0053.scaffold00196 490804 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 491106 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 491135 1 C G scaffold4182 ReadM SNP 0053.scaffold00196 491273 1 A G - ReadM SNP 0053.scaffold00196 491288 1 T C - ReadM SNP 0053.scaffold00196 491291 1 C G - Both SNP 0053.scaffold00196 491565 1 A T scaffold4182 Both SNP 0053.scaffold00196 491582 1 A C scaffold4182 Both SNP 0053.scaffold00196 491606 1 A C scaffold4182 ReadM SNP 0053.scaffold00196 491681 1 T A - ReadM SNP 0053.scaffold00196 491710 1 A G - ReadM SNP 0053.scaffold00196 491714 1 G A - ScafM SNP 0053.scaffold00196 491832 1 A G scaffold4182 Both SNP 0053.scaffold00196 492192 1 A C scaffold4182 Both SNP 0053.scaffold00196 492274 1 T G scaffold4182 Both SNP 0053.scaffold00196 492308 1 T C scaffold4182 Both SNP 0053.scaffold00196 492332 1 G A scaffold4182 Both SNP 0053.scaffold00196 492441 1 C T scaffold4182 Both INDEL 0053.scaffold00196 492523 1 . G scaffold4182 Both SNP 0053.scaffold00196 492949 1 T C scaffold4182 Both INDEL 0053.scaffold00196 493003 1 T . scaffold4182 Both SNP 0053.scaffold00196 493106 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 493253 26 .......................... ACTACTTTCCTTAATTTTCTTATGTC scaffold4182 Both SNP 0053.scaffold00196 493295 1 T C scaffold4182 Both SNP 0053.scaffold00196 493480 1 T G scaffold4182 Both SNP 0053.scaffold00196 493519 1 G C scaffold4182 Both SNP 0053.scaffold00196 493578 1 G A scaffold4182 Both INDEL 0053.scaffold00196 493770 1 T . scaffold4182 Both INDEL 0053.scaffold00196 493844 1 G . scaffold4182 Both SNP 0053.scaffold00196 494041 1 A T scaffold4182 Both SNP 0053.scaffold00196 494058 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 494118 1 C A scaffold4182 Both SNP 0053.scaffold00196 494141 1 C T scaffold4182 Both SNP 0053.scaffold00196 494210 1 C T scaffold4182 Both SNP 0053.scaffold00196 494229 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 494272 3 GGT ... scaffold4182 ScafM SNP 0053.scaffold00196 494276 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 494280 6 CACCCA ....TG scaffold4182 ScafM SNP 0053.scaffold00196 494287 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 494289 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 494293 4 AGAG .... scaffold4182 ScafM INDEL 0053.scaffold00196 494299 1 C . scaffold4182 ScafM SNP 0053.scaffold00196 494303 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 494305 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 494307 3 GGC ... scaffold4182 ScafM SNP 0053.scaffold00196 494314 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 494316 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 494319 3 TTT AGC scaffold4182 ScafM SNP 0053.scaffold00196 494323 5 TTTTT CAGAA scaffold4182 ScafM SNP 0053.scaffold00196 494329 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 494331 2 CT .G scaffold4182 Both SNP 0053.scaffold00196 494719 1 A T scaffold4182 Both SNP 0053.scaffold00196 494751 1 A T scaffold4182 Both SNP 0053.scaffold00196 494755 1 C G scaffold4182 Both SNP 0053.scaffold00196 495274 1 T C scaffold4182 Both SNP 0053.scaffold00196 495593 1 G T scaffold4182 Both INDEL 0053.scaffold00196 495689 1 T . scaffold4182 Both SNP 0053.scaffold00196 495733 1 A G scaffold4182 Both SNP 0053.scaffold00196 495905 1 A G scaffold4182 Both SNP 0053.scaffold00196 495933 1 G A scaffold4182 ScafM INDEL 0053.scaffold00196 495989 1 . A scaffold4182 ScafM SNP 0053.scaffold00196 495992 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 496078 4 TATC .... scaffold4182 Both INDEL 0053.scaffold00196 496201 2 .. AA scaffold4182 Both SNP 0053.scaffold00196 496333 1 A T scaffold4182 Both SNP 0053.scaffold00196 496379 1 C T scaffold4182 Both SNP 0053.scaffold00196 496545 1 T C scaffold4182 Both SNP 0053.scaffold00196 496593 1 G A scaffold4182 Both SNP 0053.scaffold00196 496954 1 A G scaffold4182 Both SNP 0053.scaffold00196 497015 1 A G scaffold4182 Both SNP 0053.scaffold00196 497030 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 497276 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497299 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 497303 2 .. TT scaffold4182 ScafM SNP 0053.scaffold00196 497317 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 497355 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 497360 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497490 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497493 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 497496 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497518 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497555 2 AA GG scaffold4182 ScafM SNP 0053.scaffold00196 497606 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 497616 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 497619 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 497640 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 497653 1 . A scaffold4182 ScafM INDEL 0053.scaffold00196 497679 1 . A scaffold4182 ScafM SNP 0053.scaffold00196 497722 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 498540 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 498580 2 CG TA scaffold4182 Both SNP 0053.scaffold00196 498635 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 498705 1 C A scaffold4182 ScafM SNP 0053.scaffold00196 498725 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 498843 1 G A scaffold4182 Both INDEL 0053.scaffold00196 498851 1 . A scaffold4182 Both SNP 0053.scaffold00196 498873 1 G A scaffold4182 Both SNP 0053.scaffold00196 498941 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 499377 1 C T scaffold4182 Both SNP 0053.scaffold00196 499398 1 C G scaffold4182 Both SNP 0053.scaffold00196 499418 1 A G scaffold4182 Both SNP 0053.scaffold00196 499460 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 499506 10 .......... GTGTGTGTGT scaffold4182 Both SNP 0053.scaffold00196 499537 1 G A scaffold4182 ReadM SNP 0053.scaffold00196 499657 1 C T - ReadM SNP 0053.scaffold00196 499728 1 G T - ReadM SNP 0053.scaffold00196 499858 1 C T - ReadM SNP 0053.scaffold00196 499876 1 C T - ReadM SNP 0053.scaffold00196 499956 1 T C - ReadM SNP 0053.scaffold00196 500009 1 T C - ReadM SNP 0053.scaffold00196 500056 1 G C - ReadM INDEL 0053.scaffold00196 500108 1 . C - ReadM SNP 0053.scaffold00196 500155 1 G A - ReadM SNP 0053.scaffold00196 500181 1 A C - ReadM SNP 0053.scaffold00196 500186 1 T C - ReadM SNP 0053.scaffold00196 500282 1 T G - ReadM SNP 0053.scaffold00196 500391 2 AT CC - ReadM SNP 0053.scaffold00196 500558 1 T G - ReadM SNP 0053.scaffold00196 500562 1 C G - ReadM SNP 0053.scaffold00196 500603 1 T C - ReadM SNP 0053.scaffold00196 500608 1 A C - ReadM SNP 0053.scaffold00196 500701 1 G A - ReadM SNP 0053.scaffold00196 500710 1 C T - ScafM SNP 0053.scaffold00196 503817 1 G T scaffold8997 ScafM INDEL 0053.scaffold00196 503863 1 A . scaffold8997 ReadM SNP 0053.scaffold00196 507278 1 G A - ReadM SNP 0053.scaffold00196 507578 1 C T - ReadM SNP 0053.scaffold00196 507591 1 G A - ReadM SNP 0053.scaffold00196 507606 1 A G - ScafM SNP 0053.scaffold00196 507781 1 A G scaffold4182 Both SNP 0053.scaffold00196 507816 1 G C scaffold4182 Both SNP 0053.scaffold00196 507850 1 T C scaffold4182 Both SNP 0053.scaffold00196 507862 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 507924 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 507934 1 T A scaffold4182 Both SNP 0053.scaffold00196 507948 1 C T scaffold4182 Both SNP 0053.scaffold00196 507964 1 T A scaffold4182 ReadM SNP 0053.scaffold00196 508050 1 G A - ReadM SNP 0053.scaffold00196 508158 1 G A - ReadM SNP 0053.scaffold00196 508187 1 T C - ReadM SNP 0053.scaffold00196 508206 1 A T - ReadM SNP 0053.scaffold00196 508284 1 G T - ReadM SNP 0053.scaffold00196 508301 1 G A - ReadM SNP 0053.scaffold00196 508317 1 G A - ReadM SNP 0053.scaffold00196 508347 1 C T - ReadM SNP 0053.scaffold00196 508405 1 C T - ReadM SNP 0053.scaffold00196 508530 1 G A - ReadM SNP 0053.scaffold00196 508557 1 A G - ReadM SNP 0053.scaffold00196 508633 1 A G - ReadM SNP 0053.scaffold00196 508684 1 G T - ReadM SNP 0053.scaffold00196 508960 1 G A - ReadM SNP 0053.scaffold00196 509008 1 T C - ReadM SNP 0053.scaffold00196 509068 1 G A - ReadM SNP 0053.scaffold00196 509144 1 G A - ReadM SNP 0053.scaffold00196 509163 1 T C - ReadM SNP 0053.scaffold00196 509233 1 G A - ReadM SNP 0053.scaffold00196 509261 1 C T - ReadM SNP 0053.scaffold00196 509330 1 A T - ReadM SNP 0053.scaffold00196 509349 1 G A - ReadM SNP 0053.scaffold00196 509405 1 G A - Both SNP 0053.scaffold00196 509518 1 A T scaffold4182 Both SNP 0053.scaffold00196 509574 1 A G scaffold4182 Both SNP 0053.scaffold00196 509619 1 A G scaffold4182 ReadM SNP 0053.scaffold00196 509726 1 T A - ReadM SNP 0053.scaffold00196 510030 1 A T - Both SNP 0053.scaffold00196 510331 1 C A scaffold4182 Both SNP 0053.scaffold00196 510353 1 G T scaffold4182 Both SNP 0053.scaffold00196 510373 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 510407 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 510410 1 . C scaffold4182 ScafM SNP 0053.scaffold00196 510446 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 510454 2 GC TT scaffold4182 Both INDEL 0053.scaffold00196 510525 2 TA .. scaffold4182 ScafM INDEL 0053.scaffold00196 510719 4 .... AATT scaffold4182 ScafM INDEL 0053.scaffold00196 510722 2 .. AC scaffold4182 Both SNP 0053.scaffold00196 510942 1 C G scaffold4182 Both SNP 0053.scaffold00196 510985 1 A G scaffold4182 Both SNP 0053.scaffold00196 510998 1 C G scaffold4182 Both SNP 0053.scaffold00196 511014 1 T A scaffold4182 Both SNP 0053.scaffold00196 511089 1 G A scaffold4182 Both SNP 0053.scaffold00196 511142 1 A C scaffold4182 Both SNP 0053.scaffold00196 511144 1 A G scaffold4182 Both SNP 0053.scaffold00196 511163 1 A G scaffold4182 Both SNP 0053.scaffold00196 511288 1 C T scaffold4182 Both SNP 0053.scaffold00196 511303 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 511332 1 A C scaffold4182 ScafM INDEL 0053.scaffold00196 511336 3 ... TAA scaffold4182 ScafM SNP 0053.scaffold00196 511444 1 C G scaffold4182 Both SNP 0053.scaffold00196 511548 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 511605 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 511630 1 . T scaffold4182 ScafM SNP 0053.scaffold00196 511638 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 511648 7 ATATATT ....... scaffold4182 ScafM SNP 0053.scaffold00196 511675 1 C A scaffold4182 ScafM SNP 0053.scaffold00196 511684 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 511687 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 511714 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 511723 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 511732 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 511987 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 512004 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 512036 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 512540 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 512556 1 C A scaffold4182 ScafM SNP 0053.scaffold00196 512719 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 512721 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 512733 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 512744 2 TT AG scaffold4182 ScafM INDEL 0053.scaffold00196 512752 3 ... TGC scaffold4182 ScafM SNP 0053.scaffold00196 512761 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 512772 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 512782 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 512785 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 512800 3 ... ATT scaffold4182 ScafM INDEL 0053.scaffold00196 512802 4 .... TGAT scaffold4182 ScafM INDEL 0053.scaffold00196 512803 1 . C scaffold4182 ScafM SNP 0053.scaffold00196 512810 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 512817 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 512819 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 512824 2 TA CG scaffold4182 ScafM INDEL 0053.scaffold00196 512835 1 . T scaffold4182 ScafM SNP 0053.scaffold00196 512871 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 512875 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 512890 2 AC GT scaffold4182 ScafM SNP 0053.scaffold00196 512906 2 CA TG scaffold4182 ScafM INDEL 0053.scaffold00196 512935 3 .CA GGT scaffold4182 ScafM SNP 0053.scaffold00196 512939 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 512940 2 .G TT scaffold4182 ScafM SNP 0053.scaffold00196 512943 1 C A scaffold4182 ScafM SNP 0053.scaffold00196 512946 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 512948 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 512956 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 512957 3 ... TTG scaffold4182 ScafM SNP 0053.scaffold00196 512974 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 512976 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 512990 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 512993 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 513005 1 T C scaffold4182 ScafM INDEL 0053.scaffold00196 513021 5 TTTTG ..... scaffold4182 ScafM INDEL 0053.scaffold00196 513027 2 TT .. scaffold4182 ScafM SNP 0053.scaffold00196 513040 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 513122 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 513714 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 513727 6 TTGGCC ...... scaffold4182 ScafM SNP 0053.scaffold00196 513778 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 513781 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 513805 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 513808 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 513810 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 513824 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 514126 2 TT .C scaffold4182 ScafM SNP 0053.scaffold00196 514150 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 514177 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 514179 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 514209 1 A C scaffold4182 ScafM INDEL 0053.scaffold00196 514238 1 . A scaffold4182 ScafM SNP 0053.scaffold00196 514253 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 514261 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 514276 1 C G scaffold4182 ScafM INDEL 0053.scaffold00196 514279 1 . G scaffold4182 ScafM SNP 0053.scaffold00196 514281 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 514290 7 ....... TTTGAAC scaffold4182 ScafM SNP 0053.scaffold00196 514312 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 514324 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 514330 1 G C scaffold4182 ScafM INDEL 0053.scaffold00196 514339 7 TTGTCAT ....... scaffold4182 ScafM SNP 0053.scaffold00196 514353 1 C G scaffold4182 ScafM SNP 0053.scaffold00196 514405 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 514409 1 C G scaffold4182 ScafM INDEL 0053.scaffold00196 514435 6 ...... AAGAAG scaffold4182 ScafM INDEL 0053.scaffold00196 514436 5 ..... TAAGT scaffold4182 ScafM INDEL 0053.scaffold00196 514439 13 ............. TTATACTCTTATG scaffold4182 ScafM INDEL 0053.scaffold00196 514440 2 .. TA scaffold4182 ScafM INDEL 0053.scaffold00196 514441 7 ....... AGGTAGT scaffold4182 ScafM SNP 0053.scaffold00196 514492 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 514502 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 514522 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 514668 1 C G scaffold4182 ScafM SNP 0053.scaffold00196 514670 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514676 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 514683 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 514697 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514700 1 C G scaffold4182 ScafM SNP 0053.scaffold00196 514709 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514713 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 514719 2 GT .. scaffold4182 ScafM INDEL 0053.scaffold00196 514722 1 T . scaffold4182 ScafM SNP 0053.scaffold00196 514725 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 514756 1 C T scaffold4182 ScafM INDEL 0053.scaffold00196 514781 46 .............................................. CAATCAATCATGTAACAAAACATAAGACGCGTTGACCTTCTTTTAA scaffold4182 ScafM SNP 0053.scaffold00196 514791 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514796 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514799 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 514854 3 TAA ... scaffold4182 ScafM INDEL 0053.scaffold00196 514858 6 TATATA ...... scaffold4182 ScafM INDEL 0053.scaffold00196 514865 1 T . scaffold4182 ScafM INDEL 0053.scaffold00196 514867 8 ATTTAGTT ........ scaffold4182 ScafM SNP 0053.scaffold00196 514883 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 514926 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 514935 2 CG GT scaffold4182 ScafM SNP 0053.scaffold00196 514952 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 514983 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 514986 2 GC AG scaffold4182 ScafM SNP 0053.scaffold00196 515036 1 C G scaffold4182 ScafM SNP 0053.scaffold00196 515161 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 515169 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 515183 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 515212 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 515230 1 C G scaffold4182 ScafM SNP 0053.scaffold00196 515240 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 515246 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 515260 2 TC AT scaffold4182 ScafM INDEL 0053.scaffold00196 515284 1 . G scaffold4182 ScafM INDEL 0053.scaffold00196 515285 1 . A scaffold4182 ScafM SNP 0053.scaffold00196 515287 1 C A scaffold4182 ScafM INDEL 0053.scaffold00196 515288 1 . A scaffold4182 ScafM INDEL 0053.scaffold00196 515290 2 .. GC scaffold4182 ScafM INDEL 0053.scaffold00196 515304 1 . A scaffold4182 ScafM SNP 0053.scaffold00196 515347 2 CA AG scaffold4182 ScafM INDEL 0053.scaffold00196 515354 3 ... ATT scaffold4182 ScafM INDEL 0053.scaffold00196 515373 7 ....... CAGGGTC scaffold4182 ScafM SNP 0053.scaffold00196 515862 1 T A scaffold4182 ScafM SNP 0053.scaffold00196 515873 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 515889 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 516378 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 516395 1 T A scaffold4182 ScafM INDEL 0053.scaffold00196 516401 2 .. AA scaffold4182 ScafM SNP 0053.scaffold00196 516429 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 516478 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 516486 1 G A scaffold4182 Both SNP 0053.scaffold00196 516549 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 516605 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 516631 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 516725 5 TATAT ..... scaffold4182 ScafM SNP 0053.scaffold00196 516756 1 A T scaffold4182 ReadM SNP 0053.scaffold00196 516816 1 A G - ScafM SNP 0053.scaffold00196 516878 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 517013 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 517038 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 517055 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 517058 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 517078 19 ................... TCCAAGTTCCATAGTGCAT scaffold4182 ScafM INDEL 0053.scaffold00196 517080 2 .. TT scaffold4182 ScafM SNP 0053.scaffold00196 517085 1 A T scaffold4182 ScafM INDEL 0053.scaffold00196 517087 25 ......................... TGCCATATGAAATAGAATATAGCAA scaffold4182 ScafM INDEL 0053.scaffold00196 517089 9 ......... ATACTTGCT scaffold4182 ScafM INDEL 0053.scaffold00196 517090 2 .. TA scaffold4182 ScafM INDEL 0053.scaffold00196 517093 2 .. AT scaffold4182 ScafM INDEL 0053.scaffold00196 517094 3 ... TTT scaffold4182 ScafM SNP 0053.scaffold00196 517173 1 G C scaffold4182 ScafM SNP 0053.scaffold00196 517319 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 517337 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 517366 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 517373 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 517384 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 517398 1 G A scaffold4182 ScafM INDEL 0053.scaffold00196 517426 3 GAT ... scaffold4182 ScafM SNP 0053.scaffold00196 517438 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 517479 1 T C scaffold4182 ScafM INDEL 0053.scaffold00196 517500 2 AA .. scaffold4182 ScafM SNP 0053.scaffold00196 517525 1 C A scaffold4182 ScafM SNP 0053.scaffold00196 517550 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 517564 3 CGC AAT scaffold4182 ScafM SNP 0053.scaffold00196 517574 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 517580 15 ............... TAGAGATTATAGGAA scaffold4182 ScafM INDEL 0053.scaffold00196 517583 1 . A scaffold4182 ScafM INDEL 0053.scaffold00196 517599 1 A . scaffold4182 ScafM SNP 0053.scaffold00196 517605 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 517624 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 517626 1 T C scaffold4182 ScafM INDEL 0053.scaffold00196 517628 1 C . scaffold4182 ScafM SNP 0053.scaffold00196 517630 1 T C scaffold4182 Both SNP 0053.scaffold00196 517813 1 T G scaffold4182 Both SNP 0053.scaffold00196 517873 1 A G scaffold4182 Both SNP 0053.scaffold00196 517887 1 T C scaffold4182 Both SNP 0053.scaffold00196 517927 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 517952 1 A G scaffold4182 ScafM SNP 0053.scaffold00196 517960 2 AT TA scaffold4182 ScafM INDEL 0053.scaffold00196 518013 1 T . scaffold4182 Both SNP 0053.scaffold00196 518037 1 A T scaffold4182 Both SNP 0053.scaffold00196 518109 1 C T scaffold4182 Both SNP 0053.scaffold00196 518134 1 T G scaffold4182 ScafM SNP 0053.scaffold00196 518246 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 518263 1 T C scaffold4182 ScafM INDEL 0053.scaffold00196 518265 2 .A TT scaffold4182 ScafM INDEL 0053.scaffold00196 518301 4 ATAT .... scaffold4182 ScafM SNP 0053.scaffold00196 518342 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 518353 1 T C scaffold4182 Both INDEL 0053.scaffold00196 518450 1 C . scaffold4182 ReadM SNP 0053.scaffold00196 518635 1 T C - ReadM SNP 0053.scaffold00196 518654 1 C T - ReadM SNP 0053.scaffold00196 518668 1 C T - ReadM SNP 0053.scaffold00196 518864 1 A C - ReadM INDEL 0053.scaffold00196 518931 2 .. AC - ReadM SNP 0053.scaffold00196 519093 1 T C - ReadM SNP 0053.scaffold00196 519135 1 T G - ReadM SNP 0053.scaffold00196 519173 1 G A - ReadM SNP 0053.scaffold00196 519195 1 C A - ReadM SNP 0053.scaffold00196 519214 1 T C - ReadM SNP 0053.scaffold00196 519349 1 C T - ReadM SNP 0053.scaffold00196 519463 1 T C - ReadM SNP 0053.scaffold00196 519656 1 A C - ReadM SNP 0053.scaffold00196 519664 1 C A - ReadM SNP 0053.scaffold00196 519690 1 C G - ReadM SNP 0053.scaffold00196 519769 1 C T - ReadM SNP 0053.scaffold00196 519789 1 T C - ReadM SNP 0053.scaffold00196 519798 1 T C - ReadM SNP 0053.scaffold00196 520042 1 G T - ReadM SNP 0053.scaffold00196 520092 1 C T - ReadM SNP 0053.scaffold00196 520097 1 T C - ReadM SNP 0053.scaffold00196 520102 1 C T - ReadM SNP 0053.scaffold00196 520213 1 C T - ReadM SNP 0053.scaffold00196 520223 1 G C - ReadM SNP 0053.scaffold00196 520419 1 T C - ReadM SNP 0053.scaffold00196 520424 1 C T - ReadM SNP 0053.scaffold00196 520494 1 G T - ScafM SNP 0053.scaffold00196 520757 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 520784 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 520828 2 GG AT scaffold4182 ScafM SNP 0053.scaffold00196 520833 1 G A scaffold4182 ScafM INDEL 0053.scaffold00196 520841 3 ... TTT scaffold4182 ScafM INDEL 0053.scaffold00196 520844 1 . T scaffold4182 Both SNP 0053.scaffold00196 520905 1 C T scaffold4182 Both SNP 0053.scaffold00196 520925 1 T C scaffold4182 Both SNP 0053.scaffold00196 521024 1 G T scaffold4182 Both SNP 0053.scaffold00196 521036 1 G T scaffold4182 Both SNP 0053.scaffold00196 521090 1 T C scaffold4182 ReadM SNP 0053.scaffold00196 521236 1 A T - ReadM SNP 0053.scaffold00196 521285 1 C T - ReadM SNP 0053.scaffold00196 521319 1 T C - ReadM SNP 0053.scaffold00196 521782 1 T C - ReadM SNP 0053.scaffold00196 521827 1 C T - ReadM SNP 0053.scaffold00196 521834 1 T C - ReadM SNP 0053.scaffold00196 522066 1 T C - ReadM SNP 0053.scaffold00196 522107 1 C G - ReadM INDEL 0053.scaffold00196 522130 1 . A - ReadM SNP 0053.scaffold00196 522229 1 A G - ReadM SNP 0053.scaffold00196 522255 1 C A - ReadM SNP 0053.scaffold00196 522260 1 T C - ReadM SNP 0053.scaffold00196 522339 1 C T - ReadM SNP 0053.scaffold00196 522680 1 C G - ReadM SNP 0053.scaffold00196 522688 1 C T - ReadM SNP 0053.scaffold00196 522695 1 G A - ReadM SNP 0053.scaffold00196 523167 1 A G - ReadM INDEL 0053.scaffold00196 523208 1 C . - ReadM SNP 0053.scaffold00196 523302 1 T A - ReadM SNP 0053.scaffold00196 523382 1 C A - ReadM SNP 0053.scaffold00196 523547 1 C A - ReadM SNP 0053.scaffold00196 523566 1 T C - ReadM SNP 0053.scaffold00196 523568 1 A G - Both SNP 0053.scaffold00196 523713 1 C G scaffold4182 ReadM SNP 0053.scaffold00196 523768 1 T G - ReadM INDEL 0053.scaffold00196 524147 1 . T - ScafM SNP 0053.scaffold00196 524499 1 A T scaffold4182 ScafM SNP 0053.scaffold00196 524505 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 524510 1 G T scaffold4182 ReadM SNP 0053.scaffold00196 524575 1 T C - ReadM SNP 0053.scaffold00196 524602 1 G A - ReadM SNP 0053.scaffold00196 524682 1 C T - ReadM SNP 0053.scaffold00196 524701 1 C G - ScafM SNP 0053.scaffold00196 525057 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 525065 1 A . scaffold4182 ScafM SNP 0053.scaffold00196 525067 1 T C scaffold4182 ScafM SNP 0053.scaffold00196 525100 1 G T scaffold4182 ScafM SNP 0053.scaffold00196 525135 1 G T scaffold4182 ScafM INDEL 0053.scaffold00196 525152 2 TC .. scaffold4182 Both SNP 0053.scaffold00196 525229 1 A G scaffold4182 ScafM INDEL 0053.scaffold00196 525272 1 C . scaffold4182 ScafM SNP 0053.scaffold00196 525309 1 C G scaffold4182 ScafM INDEL 0053.scaffold00196 525396 2 .. AG scaffold4182 ScafM SNP 0053.scaffold00196 525413 1 G C scaffold4182 ScafM INDEL 0053.scaffold00196 525419 7 ....... GCTGTCC scaffold4182 ScafM SNP 0053.scaffold00196 525440 1 G A scaffold4182 ScafM SNP 0053.scaffold00196 525528 1 G A scaffold4182 ReadM SNP 0053.scaffold00196 530625 1 T C - ReadM SNP 0053.scaffold00196 530646 1 A G - ScafM SNP 0053.scaffold00196 530712 1 A C scaffold4182 ScafM SNP 0053.scaffold00196 530726 1 C T scaffold4182 ScafM SNP 0053.scaffold00196 530969 1 T A scaffold4182 ReadM INDEL 0053.scaffold00196 531130 1 T . - ReadM SNP 0053.scaffold00196 544573 1 G A - ReadM SNP 0053.scaffold00196 545093 1 A G - ReadM SNP 0053.scaffold00196 545158 1 A C - ReadM SNP 0053.scaffold00196 545301 1 C T - ReadM SNP 0053.scaffold00196 545347 1 C T - ReadM SNP 0053.scaffold00196 545405 1 G A - ReadM SNP 0053.scaffold00196 545425 1 T C - ReadM SNP 0053.scaffold00196 545514 1 A G - ReadM SNP 0053.scaffold00196 545600 1 G A - ReadM SNP 0053.scaffold00196 545672 1 C T - ReadM SNP 0053.scaffold00196 545743 1 G A - ReadM SNP 0053.scaffold00196 547636 1 G A - ReadM SNP 0053.scaffold00196 547723 1 G A - ReadM SNP 0053.scaffold00196 548362 1 A T - ReadM SNP 0053.scaffold00196 548386 1 T A - ReadM SNP 0053.scaffold00196 548435 1 A T - ReadM SNP 0053.scaffold00196 548448 1 G A - ReadM SNP 0053.scaffold00196 548499 1 C G - ReadM SNP 0053.scaffold00196 548832 1 T C - ReadM SNP 0053.scaffold00196 548983 1 T C - ScafM SNP 0053.scaffold00196 549238 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 549243 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 549245 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 549251 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 549281 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 549294 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 549319 1 C G scaffold4670 ScafM SNP 0053.scaffold00196 549366 1 C T scaffold4670 ReadM SNP 0053.scaffold00196 550469 1 G A - ReadM SNP 0053.scaffold00196 550847 1 A G - ReadM SNP 0053.scaffold00196 550872 1 C T - ReadM SNP 0053.scaffold00196 550893 1 A C - ReadM SNP 0053.scaffold00196 550966 1 G T - ReadM SNP 0053.scaffold00196 551310 1 A G - ReadM SNP 0053.scaffold00196 551330 1 T A - ScafM SNP 0053.scaffold00196 552855 1 C A scaffold4987 ScafM SNP 0053.scaffold00196 552895 1 C G scaffold4987 ScafM SNP 0053.scaffold00196 552931 2 GA CC scaffold4987 ScafM SNP 0053.scaffold00196 552937 1 A T scaffold4987 ScafM INDEL 0053.scaffold00196 552946 1 T . scaffold4987 ScafM SNP 0053.scaffold00196 552968 1 A C scaffold4987 ScafM SNP 0053.scaffold00196 553019 1 T C scaffold4987 ScafM INDEL 0053.scaffold00196 553025 2 TT .G scaffold4987 ScafM INDEL 0053.scaffold00196 553029 3 GTT ... scaffold4987 ScafM SNP 0053.scaffold00196 553046 1 A G scaffold4987 ScafM SNP 0053.scaffold00196 553049 1 T C scaffold4987 ScafM SNP 0053.scaffold00196 553068 1 A G scaffold4987 ScafM SNP 0053.scaffold00196 553070 1 G T scaffold4987 ScafM SNP 0053.scaffold00196 553105 1 G A scaffold4987 ScafM SNP 0053.scaffold00196 553109 1 T A scaffold4987 ScafM SNP 0053.scaffold00196 553114 1 T A scaffold4987 ScafM SNP 0053.scaffold00196 553122 1 A T scaffold4987 ScafM SNP 0053.scaffold00196 553127 1 T G scaffold4987 ScafM SNP 0053.scaffold00196 553136 1 T C scaffold4987 ScafM SNP 0053.scaffold00196 553144 1 A T scaffold4987 ScafM SNP 0053.scaffold00196 553149 1 G A scaffold4987 ScafM SNP 0053.scaffold00196 553163 1 G A scaffold4987 ScafM SNP 0053.scaffold00196 553173 1 C A scaffold4987 ReadM SNP 0053.scaffold00196 556690 1 A C - ReadM SNP 0053.scaffold00196 564474 1 C T - ReadM SNP 0053.scaffold00196 564580 1 T G - ReadM SNP 0053.scaffold00196 564747 1 G T - ReadM SNP 0053.scaffold00196 564824 1 G C - ReadM SNP 0053.scaffold00196 564906 1 T G - ReadM SNP 0053.scaffold00196 564909 1 A C - ReadM SNP 0053.scaffold00196 564937 1 G T - ReadM SNP 0053.scaffold00196 565243 1 C A - ReadM SNP 0053.scaffold00196 565333 1 T C - ReadM SNP 0053.scaffold00196 565371 1 A G - ReadM INDEL 0053.scaffold00196 565384 1 C . - ReadM SNP 0053.scaffold00196 565549 1 G T - ReadM SNP 0053.scaffold00196 565554 1 A C - ReadM SNP 0053.scaffold00196 565626 1 A G - ReadM SNP 0053.scaffold00196 565663 1 G T - ReadM SNP 0053.scaffold00196 566001 1 C T - ReadM SNP 0053.scaffold00196 566063 1 C T - ReadM SNP 0053.scaffold00196 566159 1 A T - ReadM SNP 0053.scaffold00196 566182 1 C T - ReadM SNP 0053.scaffold00196 566352 1 G T - ReadM SNP 0053.scaffold00196 566368 1 C A - ReadM SNP 0053.scaffold00196 566399 1 T G - ReadM SNP 0053.scaffold00196 566795 1 C T - ReadM SNP 0053.scaffold00196 566812 1 T C - ReadM SNP 0053.scaffold00196 566815 1 A C - ReadM SNP 0053.scaffold00196 566956 1 G T - ReadM SNP 0053.scaffold00196 566980 1 T G - ReadM SNP 0053.scaffold00196 567010 1 G A - ReadM SNP 0053.scaffold00196 567165 1 C T - ReadM SNP 0053.scaffold00196 567190 1 T C - ReadM SNP 0053.scaffold00196 567229 1 T A - ReadM SNP 0053.scaffold00196 567347 1 T G - ReadM SNP 0053.scaffold00196 567359 1 G T - ReadM SNP 0053.scaffold00196 567391 1 G C - ReadM SNP 0053.scaffold00196 567423 1 C T - ReadM SNP 0053.scaffold00196 567737 1 A C - ReadM SNP 0053.scaffold00196 567808 1 C A - ReadM SNP 0053.scaffold00196 567870 1 A G - ReadM SNP 0053.scaffold00196 567884 1 G A - ReadM SNP 0053.scaffold00196 567902 1 T C - ReadM SNP 0053.scaffold00196 567957 1 T C - ReadM INDEL 0053.scaffold00196 568042 1 . G - ReadM SNP 0053.scaffold00196 568339 1 A G - ReadM SNP 0053.scaffold00196 568356 1 T A - ReadM SNP 0053.scaffold00196 568362 1 G A - ReadM SNP 0053.scaffold00196 568410 1 A G - ReadM SNP 0053.scaffold00196 568447 1 G A - ReadM SNP 0053.scaffold00196 568560 1 T C - ReadM SNP 0053.scaffold00196 568563 1 C T - ReadM SNP 0053.scaffold00196 568579 1 C T - ReadM SNP 0053.scaffold00196 568657 1 C T - ReadM SNP 0053.scaffold00196 568660 1 C T - ReadM SNP 0053.scaffold00196 568682 1 C T - ReadM SNP 0053.scaffold00196 568777 1 A T - ReadM SNP 0053.scaffold00196 568802 1 G A - ReadM INDEL 0053.scaffold00196 568914 1 T . - ReadM SNP 0053.scaffold00196 569164 1 T C - ReadM SNP 0053.scaffold00196 569181 1 G A - ReadM SNP 0053.scaffold00196 569185 1 C T - ReadM SNP 0053.scaffold00196 569241 1 T A - ReadM SNP 0053.scaffold00196 569275 1 G A - ReadM SNP 0053.scaffold00196 569316 1 A G - ReadM SNP 0053.scaffold00196 569361 1 G A - Both SNP 0053.scaffold00196 569587 1 G A scaffold4670 Both SNP 0053.scaffold00196 569691 1 T A scaffold4670 Both SNP 0053.scaffold00196 569728 1 T C scaffold4670 Both SNP 0053.scaffold00196 569736 1 C T scaffold4670 Both SNP 0053.scaffold00196 569796 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 569799 1 A G scaffold4670 Both SNP 0053.scaffold00196 569905 1 T C scaffold4670 Both SNP 0053.scaffold00196 569964 1 T C scaffold4670 Both INDEL 0053.scaffold00196 569988 2 .. CT scaffold4670 ReadM SNP 0053.scaffold00196 570064 1 T C - ReadM SNP 0053.scaffold00196 570089 1 C A - ScafM SNP 0053.scaffold00196 570184 1 G C scaffold4670 ScafM SNP 0053.scaffold00196 570187 1 A T scaffold4670 ScafM INDEL 0053.scaffold00196 570189 1 T . scaffold4670 Both SNP 0053.scaffold00196 570220 1 A T scaffold4670 Both SNP 0053.scaffold00196 570245 1 T C scaffold4670 Both SNP 0053.scaffold00196 570319 1 T A scaffold4670 Both SNP 0053.scaffold00196 570369 1 T C scaffold4670 Both SNP 0053.scaffold00196 570449 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 570511 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 570516 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 570521 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 570534 1 G C scaffold4670 ReadM SNP 0053.scaffold00196 570766 1 C T - ReadM SNP 0053.scaffold00196 570780 1 C T - ScafM INDEL 0053.scaffold00196 570933 1 A . scaffold4670 ScafM SNP 0053.scaffold00196 570946 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 570953 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 570985 1 A . scaffold4670 ScafM SNP 0053.scaffold00196 570991 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 570998 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 571014 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 571037 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 571057 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 571065 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 571101 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 571111 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 571259 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 571269 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 571276 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 571344 1 G C scaffold4670 ScafM SNP 0053.scaffold00196 571397 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 571406 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 571425 1 C T scaffold4670 ScafM INDEL 0053.scaffold00196 571428 1 T . scaffold4670 ScafM SNP 0053.scaffold00196 571431 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 571436 1 C A scaffold4670 ScafM INDEL 0053.scaffold00196 571451 5 ..... TTTTT scaffold4670 ScafM SNP 0053.scaffold00196 571454 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 571824 1 C G scaffold4670 ScafM SNP 0053.scaffold00196 571834 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 571850 1 C T scaffold4670 ScafM INDEL 0053.scaffold00196 571856 3 ... ACC scaffold4670 ScafM SNP 0053.scaffold00196 571868 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 571904 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 571908 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 571922 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 571929 8 ATAAAAGT ........ scaffold4670 ScafM SNP 0053.scaffold00196 572020 1 T A scaffold4670 ScafM INDEL 0053.scaffold00196 572024 1 A . scaffold4670 ScafM SNP 0053.scaffold00196 572027 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 572091 2 TA CG scaffold4670 ScafM INDEL 0053.scaffold00196 572118 3 .GT TAG scaffold4670 ScafM SNP 0053.scaffold00196 572137 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 572151 1 T C scaffold4670 Both SNP 0053.scaffold00196 572185 1 T C scaffold4670 Both SNP 0053.scaffold00196 572211 1 C T scaffold4670 ScafM INDEL 0053.scaffold00196 572289 1 . G scaffold4670 ScafM SNP 0053.scaffold00196 572291 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 572305 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 572318 1 G C scaffold4670 ScafM SNP 0053.scaffold00196 572350 1 A G scaffold4670 Both SNP 0053.scaffold00196 572367 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 572388 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 572446 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 572475 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 572500 1 T . scaffold4670 ScafM SNP 0053.scaffold00196 572532 1 A G scaffold4670 ScafM INDEL 0053.scaffold00196 572744 4 TATT .... scaffold4670 ScafM INDEL 0053.scaffold00196 572750 4 ATCA .... scaffold4670 ScafM SNP 0053.scaffold00196 572769 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 572773 1 G C scaffold4670 ScafM SNP 0053.scaffold00196 572777 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 572794 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 572797 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 572806 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 572810 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 572820 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 572873 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 572900 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 573859 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 573862 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 573864 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 573869 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 573876 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 573881 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 573884 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 573886 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 573892 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 574152 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 574167 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 574177 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 574193 1 T C scaffold4670 Both SNP 0053.scaffold00196 574233 1 G C scaffold4670 ScafM INDEL 0053.scaffold00196 574405 8 ........ AGACTTGA scaffold4670 Both SNP 0053.scaffold00196 574481 1 C T scaffold4670 Both SNP 0053.scaffold00196 574532 1 A G scaffold4670 Both SNP 0053.scaffold00196 574590 1 T A scaffold4670 Both SNP 0053.scaffold00196 574603 1 A T scaffold4670 Both SNP 0053.scaffold00196 574614 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 574670 1 G C scaffold4670 ScafM SNP 0053.scaffold00196 574680 1 A G scaffold4670 ReadM SNP 0053.scaffold00196 574716 1 A G - ReadM SNP 0053.scaffold00196 574738 1 C T - ReadM INDEL 0053.scaffold00196 575059 1 C . - ReadM SNP 0053.scaffold00196 575117 1 A G - ScafM SNP 0053.scaffold00196 575172 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 575214 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 575226 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 575266 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 575268 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 575275 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 575304 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 575317 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 575323 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 575333 2 TC AT scaffold4670 ScafM SNP 0053.scaffold00196 575348 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 575383 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 575398 1 C T scaffold4670 ReadM SNP 0053.scaffold00196 575905 1 G A - ReadM INDEL 0053.scaffold00196 575983 1 A . - ReadM SNP 0053.scaffold00196 581377 1 T C - ReadM SNP 0053.scaffold00196 581387 1 A G - ReadM SNP 0053.scaffold00196 581512 1 G A - ReadM SNP 0053.scaffold00196 581623 1 T G - ReadM SNP 0053.scaffold00196 581686 1 C A - ReadM SNP 0053.scaffold00196 581713 1 T C - ReadM SNP 0053.scaffold00196 581717 1 C A - ReadM SNP 0053.scaffold00196 581866 1 A T - ReadM SNP 0053.scaffold00196 581876 1 G C - ReadM SNP 0053.scaffold00196 581915 1 A T - ReadM SNP 0053.scaffold00196 581974 1 G T - ReadM SNP 0053.scaffold00196 582030 1 C T - ReadM SNP 0053.scaffold00196 582057 1 G C - ReadM SNP 0053.scaffold00196 582063 1 A G - ReadM SNP 0053.scaffold00196 582123 1 G A - ReadM SNP 0053.scaffold00196 582138 1 T C - ReadM SNP 0053.scaffold00196 582140 1 T C - ReadM SNP 0053.scaffold00196 582287 1 A T - ReadM SNP 0053.scaffold00196 582424 1 T G - ReadM SNP 0053.scaffold00196 582456 1 T C - ReadM SNP 0053.scaffold00196 582528 1 A G - ReadM SNP 0053.scaffold00196 582557 1 A T - ScafM SNP 0053.scaffold00196 582770 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 582814 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 582816 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 582841 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 582847 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 582885 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 582996 2 AG .. scaffold4670 ScafM INDEL 0053.scaffold00196 582999 3 TAA ... scaffold4670 ScafM SNP 0053.scaffold00196 583013 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 583018 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 583022 2 TG AA scaffold4670 Both SNP 0053.scaffold00196 583053 1 A G scaffold4670 Both SNP 0053.scaffold00196 583064 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 583134 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 583137 1 C A scaffold4670 ScafM INDEL 0053.scaffold00196 583149 1 T . scaffold4670 ScafM SNP 0053.scaffold00196 583151 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 583160 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 583170 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 583184 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 583204 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 583241 2 TA CT scaffold4670 ScafM SNP 0053.scaffold00196 583252 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 583264 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 583299 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 583313 2 CG TA scaffold4670 ScafM SNP 0053.scaffold00196 583324 1 A G scaffold4670 ReadM INDEL 0053.scaffold00196 583785 1 T . - ReadM SNP 0053.scaffold00196 583818 1 G A - ReadM SNP 0053.scaffold00196 584280 1 T C - ReadM SNP 0053.scaffold00196 584668 1 C T - ReadM SNP 0053.scaffold00196 584805 1 C T - ReadM SNP 0053.scaffold00196 584828 1 C T - ReadM SNP 0053.scaffold00196 584844 1 G A - ReadM SNP 0053.scaffold00196 584864 1 G T - ReadM SNP 0053.scaffold00196 584960 1 A T - ReadM SNP 0053.scaffold00196 584979 1 C A - ReadM SNP 0053.scaffold00196 585219 1 A T - ReadM SNP 0053.scaffold00196 585245 1 A G - ReadM SNP 0053.scaffold00196 585281 1 G A - ReadM SNP 0053.scaffold00196 585332 1 A G - ReadM SNP 0053.scaffold00196 585376 1 A T - ReadM INDEL 0053.scaffold00196 585443 1 A . - ReadM SNP 0053.scaffold00196 585645 1 T A - ReadM SNP 0053.scaffold00196 585654 1 A G - ReadM SNP 0053.scaffold00196 585713 1 G T - ReadM SNP 0053.scaffold00196 585968 1 T C - ScafM SNP 0053.scaffold00196 586127 1 A G scaffold4670 ReadM SNP 0053.scaffold00196 586546 1 G A - ReadM SNP 0053.scaffold00196 586572 1 A G - ReadM SNP 0053.scaffold00196 586587 1 A G - ReadM SNP 0053.scaffold00196 586858 1 C T - ReadM SNP 0053.scaffold00196 586865 1 G T - ReadM SNP 0053.scaffold00196 586889 1 G A - ReadM SNP 0053.scaffold00196 586932 1 A C - ReadM SNP 0053.scaffold00196 586989 1 G T - ReadM SNP 0053.scaffold00196 587025 1 T C - ReadM SNP 0053.scaffold00196 587090 1 G A - ReadM SNP 0053.scaffold00196 587096 1 C T - ReadM SNP 0053.scaffold00196 587123 1 G A - ReadM SNP 0053.scaffold00196 587581 1 T C - ReadM SNP 0053.scaffold00196 587591 1 A T - Both SNP 0053.scaffold00196 587678 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 587737 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 587741 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 587752 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 587774 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 587776 1 G C scaffold4670 ScafM INDEL 0053.scaffold00196 587816 5 CCCGG ..... scaffold4670 ScafM SNP 0053.scaffold00196 587874 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 587906 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 587930 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 587935 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 587939 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 587950 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 587952 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 587972 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 587975 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 588011 1 G C scaffold4670 ScafM INDEL 0053.scaffold00196 588030 1 . T scaffold4670 ScafM SNP 0053.scaffold00196 588032 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 588043 1 T C scaffold4670 Both SNP 0053.scaffold00196 588076 1 G A scaffold4670 ReadM SNP 0053.scaffold00196 588084 1 A G - ScafM SNP 0053.scaffold00196 588295 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 588317 2 AG CA scaffold4670 ScafM SNP 0053.scaffold00196 588321 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 588332 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 588351 22 ATCAACTCTCTTTACAATAATT ...................... scaffold4670 ScafM SNP 0053.scaffold00196 588405 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 588411 1 A G scaffold4670 ScafM INDEL 0053.scaffold00196 588415 10 .......... TTAAACTATT scaffold4670 ReadM SNP 0053.scaffold00196 588503 1 A G - ReadM SNP 0053.scaffold00196 588505 1 C T - ScafM SNP 0053.scaffold00196 588571 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 588583 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 588604 2 AA GT scaffold4670 ScafM INDEL 0053.scaffold00196 588616 1 . T scaffold4670 ScafM SNP 0053.scaffold00196 588647 2 TA AT scaffold4670 ScafM SNP 0053.scaffold00196 588669 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 588678 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 588712 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 588745 1 A C scaffold4670 ScafM INDEL 0053.scaffold00196 588759 1 T . scaffold4670 ScafM INDEL 0053.scaffold00196 588764 1 . T scaffold4670 ScafM INDEL 0053.scaffold00196 588769 1 A . scaffold4670 ScafM SNP 0053.scaffold00196 588771 1 A G scaffold4670 ReadM SNP 0053.scaffold00196 588948 1 G C - ReadM SNP 0053.scaffold00196 588968 1 T C - ScafM SNP 0053.scaffold00196 589239 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 589245 1 T A scaffold4670 ScafM SNP 0053.scaffold00196 589278 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 590154 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 590179 3 ATG GCC scaffold4670 ScafM SNP 0053.scaffold00196 590197 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 590269 1 T A scaffold4670 ScafM INDEL 0053.scaffold00196 590273 1 . G scaffold4670 ScafM SNP 0053.scaffold00196 590294 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 590300 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 590302 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 590312 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 590328 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 590377 1 G A scaffold4670 ScafM INDEL 0053.scaffold00196 590396 1 . G scaffold4670 ScafM SNP 0053.scaffold00196 590398 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 590400 1 C G scaffold4670 Both SNP 0053.scaffold00196 590480 1 C A scaffold4670 ReadM SNP 0053.scaffold00196 590503 1 G A - ReadM SNP 0053.scaffold00196 590514 1 C T - ReadM SNP 0053.scaffold00196 590610 1 C T - ReadM SNP 0053.scaffold00196 590628 1 A T - Both SNP 0053.scaffold00196 590741 1 A C scaffold4670 ScafM SNP 0053.scaffold00196 590745 1 C G scaffold4670 ScafM SNP 0053.scaffold00196 590765 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 590832 1 T G scaffold4670 ScafM SNP 0053.scaffold00196 590834 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 590846 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 591356 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 591388 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 591394 1 C A scaffold4670 ScafM SNP 0053.scaffold00196 591408 1 C G scaffold4670 ScafM SNP 0053.scaffold00196 591425 1 G A scaffold4670 ScafM SNP 0053.scaffold00196 591478 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 591492 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 591503 1 T C scaffold4670 ScafM INDEL 0053.scaffold00196 591586 3 ... ACT scaffold4670 ScafM SNP 0053.scaffold00196 591587 1 G T scaffold4670 ScafM SNP 0053.scaffold00196 591671 1 A G scaffold4670 ScafM INDEL 0053.scaffold00196 591682 2 CA .T scaffold4670 Both INDEL 0053.scaffold00196 591729 1 A . scaffold4670 Both SNP 0053.scaffold00196 591741 1 G A scaffold4670 Both SNP 0053.scaffold00196 591845 1 T G scaffold4670 Both SNP 0053.scaffold00196 591981 1 C T scaffold4670 ScafM INDEL 0053.scaffold00196 592278 1 . T scaffold4670 ScafM INDEL 0053.scaffold00196 592368 3 ... AAG scaffold4670 ReadM SNP 0053.scaffold00196 592699 1 A G - ScafM SNP 0053.scaffold00196 592798 1 G A scaffold4670 ScafM INDEL 0053.scaffold00196 593088 4 TAGG .... scaffold4670 ScafM SNP 0053.scaffold00196 593377 1 A T scaffold4670 Both SNP 0053.scaffold00196 593996 1 G T scaffold4670 Both SNP 0053.scaffold00196 594044 1 A G scaffold4670 ScafM SNP 0053.scaffold00196 594383 1 C A scaffold4670 Both SNP 0053.scaffold00196 595944 1 A G scaffold4670 Both SNP 0053.scaffold00196 595963 1 C T scaffold4670 ReadM SNP 0053.scaffold00196 596260 1 A G - ReadM SNP 0053.scaffold00196 596289 1 T C - ReadM INDEL 0053.scaffold00196 596384 1 . A - ReadM INDEL 0053.scaffold00196 596491 1 . A - ReadM SNP 0053.scaffold00196 599563 1 C T - ScafM SNP 0053.scaffold00196 599948 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 599955 1 T C scaffold4670 ScafM SNP 0053.scaffold00196 599965 1 C T scaffold4670 ScafM SNP 0053.scaffold00196 599967 1 A T scaffold4670 ScafM SNP 0053.scaffold00196 600107 1 T C scaffold4670 ReadM SNP 0053.scaffold00196 601551 1 G A - ReadM SNP 0053.scaffold00196 601691 1 A G - ReadM SNP 0053.scaffold00196 601741 1 A G - ReadM SNP 0053.scaffold00196 601755 1 T C - ReadM SNP 0053.scaffold00196 601934 1 A G - ReadM SNP 0053.scaffold00196 602044 1 G A - ReadM SNP 0053.scaffold00196 602073 1 G A - ReadM SNP 0053.scaffold00196 602199 1 A G - ReadM SNP 0053.scaffold00196 602208 1 G A - ReadM SNP 0053.scaffold00196 602261 1 A G - ReadM SNP 0053.scaffold00196 602305 1 T C - ReadM SNP 0053.scaffold00196 602333 1 G A - ReadM SNP 0053.scaffold00196 602352 1 T C - ReadM SNP 0053.scaffold00196 602436 1 G A - Both SNP 0053.scaffold00196 602447 1 G A scaffold4670 ReadM SNP 0053.scaffold00196 602521 1 T C - ReadM SNP 0053.scaffold00196 602547 1 A T - ReadM SNP 0053.scaffold00196 602578 1 C T - ReadM SNP 0053.scaffold00196 602617 1 G T - ReadM SNP 0053.scaffold00196 602681 1 C T - ReadM SNP 0053.scaffold00196 602689 1 G A - ReadM SNP 0053.scaffold00196 602887 1 A G - ReadM SNP 0053.scaffold00196 602960 1 C T - ReadM SNP 0053.scaffold00196 603164 1 G C - ReadM SNP 0053.scaffold00196 603243 1 T C - ReadM SNP 0053.scaffold00196 603336 1 T C - ReadM SNP 0053.scaffold00196 603448 1 C T - ReadM SNP 0053.scaffold00196 603591 1 A T - ReadM SNP 0053.scaffold00196 603932 1 C T - ReadM SNP 0053.scaffold00196 604023 1 C T - ReadM SNP 0053.scaffold00196 604271 1 T C - ReadM SNP 0053.scaffold00196 604303 1 A G - ReadM SNP 0053.scaffold00196 604386 1 A C - ReadM SNP 0053.scaffold00196 604443 1 C T - ReadM SNP 0053.scaffold00196 604491 1 T C - ReadM SNP 0053.scaffold00196 604521 1 A G - ReadM SNP 0053.scaffold00196 604526 1 T A - ReadM SNP 0053.scaffold00196 604597 1 C G - ReadM SNP 0053.scaffold00196 604779 1 C A - ReadM SNP 0053.scaffold00196 604819 1 G A - ReadM SNP 0053.scaffold00196 604937 1 C A - ReadM SNP 0053.scaffold00196 605056 1 T C - ReadM SNP 0053.scaffold00196 605143 1 T C - ReadM SNP 0053.scaffold00196 605299 1 G A - ReadM SNP 0053.scaffold00196 605331 1 G T - ReadM SNP 0053.scaffold00196 605381 1 G A - ReadM SNP 0053.scaffold00196 605403 1 T G - ReadM SNP 0053.scaffold00196 605433 1 G A - ReadM SNP 0053.scaffold00196 605480 1 G A - ReadM SNP 0053.scaffold00196 605971 1 G A - ReadM SNP 0053.scaffold00196 606021 1 T C - ReadM SNP 0053.scaffold00196 606139 1 G A - ReadM SNP 0053.scaffold00196 606200 1 G A - ReadM SNP 0053.scaffold00196 606623 1 T C - ReadM SNP 0053.scaffold00196 606734 1 G T - ReadM SNP 0053.scaffold00196 606792 1 C G - ReadM SNP 0053.scaffold00196 606880 1 T C - ReadM SNP 0053.scaffold00196 607028 1 G A - ReadM SNP 0053.scaffold00196 607127 1 C T - ReadM INDEL 0053.scaffold00196 607147 1 . A - ReadM SNP 0053.scaffold00196 607172 1 G A - ReadM SNP 0053.scaffold00196 607182 1 T C - ReadM SNP 0053.scaffold00196 607197 1 G A - ReadM INDEL 0053.scaffold00196 607404 3 ... GTA - ReadM SNP 0053.scaffold00196 607551 1 G A - ReadM SNP 0053.scaffold00196 607561 1 A G - ReadM SNP 0053.scaffold00196 607569 1 G C - ReadM SNP 0053.scaffold00196 607714 1 A G - ReadM SNP 0053.scaffold00196 607733 1 C T - ReadM SNP 0053.scaffold00196 607842 1 G T - ReadM SNP 0053.scaffold00196 607908 1 A G - ReadM SNP 0053.scaffold00196 608012 1 G A - ReadM SNP 0053.scaffold00196 608025 1 C T - ReadM SNP 0053.scaffold00196 608051 1 T G - ReadM SNP 0053.scaffold00196 608183 1 A C - ReadM SNP 0053.scaffold00196 608222 1 A G - ReadM SNP 0053.scaffold00196 608232 1 G A - ReadM SNP 0053.scaffold00196 608310 1 T C - ReadM INDEL 0053.scaffold00196 608634 1 . G - ReadM INDEL 0053.scaffold00196 608928 1 T . - ReadM SNP 0053.scaffold00196 608964 1 A G - ReadM SNP 0053.scaffold00196 608991 1 C A - ReadM SNP 0053.scaffold00196 609056 1 A G - ReadM SNP 0053.scaffold00196 609084 1 C G - ReadM SNP 0053.scaffold00196 609111 1 A G - ReadM SNP 0053.scaffold00196 609226 1 C G - ReadM INDEL 0053.scaffold00196 609274 1 . A - ReadM SNP 0053.scaffold00196 609586 1 C G - ReadM SNP 0053.scaffold00196 609610 1 T A - ReadM SNP 0053.scaffold00196 610133 1 C A - ReadM SNP 0053.scaffold00196 610221 1 C T - ReadM SNP 0053.scaffold00196 610259 1 T A - ReadM SNP 0053.scaffold00196 610315 1 C T - ReadM SNP 0053.scaffold00196 610384 1 G A - ReadM SNP 0053.scaffold00196 610449 1 C G - ReadM SNP 0053.scaffold00196 610619 1 G C - ReadM SNP 0053.scaffold00196 610837 1 G T - ScafM SNP 0053.scaffold00196 625134 1 T A scaffold13666 ScafM INDEL 0053.scaffold00196 625200 6 ...... AGCCTA scaffold13666 Both INDEL 0053.scaffold00196 625418 1 . A scaffold13666 ScafM SNP 0053.scaffold00196 626424 1 G C scaffold13666 ScafM INDEL 0053.scaffold00196 626462 1 T . scaffold13666 ScafM SNP 0053.scaffold00196 626522 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 626539 1 T A scaffold13666 Both SNP 0053.scaffold00196 626640 1 T G scaffold13666 Both SNP 0053.scaffold00196 626653 1 T C scaffold13666 ReadM INDEL 0053.scaffold00196 626700 1 . G - ReadM SNP 0053.scaffold00196 626868 1 C T - Both INDEL 0053.scaffold00196 626968 2 AA .. scaffold13666 Both SNP 0053.scaffold00196 627022 1 G A scaffold13666 ReadM SNP 0053.scaffold00196 627159 1 T C - ReadM SNP 0053.scaffold00196 627164 1 A G - Both SNP 0053.scaffold00196 627407 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 627488 1 C A scaffold13666 ScafM INDEL 0053.scaffold00196 627532 1 . A scaffold13666 Both SNP 0053.scaffold00196 627707 1 A T scaffold13666 Both SNP 0053.scaffold00196 627993 1 A C scaffold13666 Both SNP 0053.scaffold00196 628085 1 A G scaffold13666 ScafM INDEL 0053.scaffold00196 628184 5 ..... AAAAA scaffold13666 ScafM SNP 0053.scaffold00196 628191 1 T A scaffold13666 ScafM SNP 0053.scaffold00196 628679 2 TT AC scaffold13666 ScafM INDEL 0053.scaffold00196 628716 18 .................. AAAGGTTCATTACAAATA scaffold13666 ScafM INDEL 0053.scaffold00196 628808 40 ........................................ TCGATTCGCTTGAACCATTTCATAACATTCTTCAACATTT scaffold13666 ReadM SNP 0053.scaffold00196 628809 1 C T - ScafM INDEL 0053.scaffold00196 628809 2 .. AT scaffold13666 Both SNP 0053.scaffold00196 628835 1 A G scaffold13666 ReadM SNP 0053.scaffold00196 629273 1 A G - ReadM SNP 0053.scaffold00196 629328 1 G T - ReadM SNP 0053.scaffold00196 629478 1 A T - ReadM SNP 0053.scaffold00196 629493 1 T C - ReadM SNP 0053.scaffold00196 629525 1 A G - Both SNP 0053.scaffold00196 629675 1 G C scaffold13666 Both SNP 0053.scaffold00196 629683 1 G A scaffold13666 ScafM SNP 0053.scaffold00196 629707 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 629711 1 A G scaffold13666 Both SNP 0053.scaffold00196 629836 1 T C scaffold13666 ScafM INDEL 0053.scaffold00196 629886 7 ....... TGCTTTT scaffold13666 ScafM INDEL 0053.scaffold00196 629888 1 . G scaffold13666 Both SNP 0053.scaffold00196 630174 1 C T scaffold13666 Both SNP 0053.scaffold00196 630176 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 630214 1 G A scaffold13666 Both SNP 0053.scaffold00196 630329 1 A G scaffold13666 Both SNP 0053.scaffold00196 630441 1 C T scaffold13666 ScafM INDEL 0053.scaffold00196 630483 5 TTTAA ..... scaffold13666 ScafM SNP 0053.scaffold00196 630599 1 C T scaffold13666 Both SNP 0053.scaffold00196 630722 1 T C scaffold13666 Both SNP 0053.scaffold00196 630728 1 G A scaffold13666 Both SNP 0053.scaffold00196 630928 1 C A scaffold13666 ScafM INDEL 0053.scaffold00196 630968 2 AA .. scaffold13666 ScafM SNP 0053.scaffold00196 630971 1 A T scaffold13666 ScafM SNP 0053.scaffold00196 630977 1 A T scaffold13666 Both SNP 0053.scaffold00196 631085 1 T C scaffold13666 Both SNP 0053.scaffold00196 631149 1 T C scaffold13666 Both SNP 0053.scaffold00196 631182 1 G A scaffold13666 Both SNP 0053.scaffold00196 631238 1 T C scaffold13666 Both SNP 0053.scaffold00196 631423 1 G A scaffold13666 Both SNP 0053.scaffold00196 631764 1 T C scaffold13666 ScafM INDEL 0053.scaffold00196 631787 1 A . scaffold13666 ScafM SNP 0053.scaffold00196 631789 1 A G scaffold13666 ScafM SNP 0053.scaffold00196 631800 1 G A scaffold13666 ScafM INDEL 0053.scaffold00196 631816 1 T . scaffold13666 ScafM INDEL 0053.scaffold00196 631824 3 ACG ... scaffold13666 Both SNP 0053.scaffold00196 631845 1 G A scaffold13666 Both SNP 0053.scaffold00196 631963 1 C T scaffold13666 Both SNP 0053.scaffold00196 632155 1 T A scaffold13666 ReadM SNP 0053.scaffold00196 632272 1 C T - Both SNP 0053.scaffold00196 632589 1 C T scaffold13666 Both SNP 0053.scaffold00196 632633 1 A T scaffold13666 Both SNP 0053.scaffold00196 632977 1 T C scaffold13666 Both SNP 0053.scaffold00196 633075 1 C A scaffold13666 Both INDEL 0053.scaffold00196 633115 3 ... ACA scaffold13666 ReadM SNP 0053.scaffold00196 633283 1 T C - Both SNP 0053.scaffold00196 633700 1 A G scaffold13666 ReadM SNP 0053.scaffold00196 633958 1 T C - ReadM SNP 0053.scaffold00196 633986 1 A G - ReadM SNP 0053.scaffold00196 634000 1 C A - Both SNP 0053.scaffold00196 634057 1 A T scaffold13666 Both SNP 0053.scaffold00196 634509 1 T C scaffold13666 Both SNP 0053.scaffold00196 634881 1 T C scaffold13666 Both SNP 0053.scaffold00196 634956 1 T C scaffold13666 Both SNP 0053.scaffold00196 635118 1 A G scaffold13666 Both SNP 0053.scaffold00196 635161 1 G T scaffold13666 Both SNP 0053.scaffold00196 635300 1 C T scaffold13666 Both INDEL 0053.scaffold00196 635401 1 A . scaffold13666 Both SNP 0053.scaffold00196 635981 1 C T scaffold13666 Both SNP 0053.scaffold00196 636157 1 C A scaffold13666 Both SNP 0053.scaffold00196 636432 1 C A scaffold13666 Both SNP 0053.scaffold00196 636469 1 G A scaffold13666 Both SNP 0053.scaffold00196 636506 1 T C scaffold13666 ReadM INDEL 0053.scaffold00196 636859 3 ACC ... - ScafM INDEL 0053.scaffold00196 637195 17 ATTGTGGGTAAAACGGA ................. scaffold13666 Both SNP 0053.scaffold00196 637233 1 C T scaffold13666 Both SNP 0053.scaffold00196 637266 1 G T scaffold13666 Both SNP 0053.scaffold00196 637316 1 A G scaffold13666 Both SNP 0053.scaffold00196 637800 1 G A scaffold13666 Both SNP 0053.scaffold00196 638116 1 G C scaffold13666 Both SNP 0053.scaffold00196 638243 1 C A scaffold13666 Both SNP 0053.scaffold00196 638685 1 A G scaffold13666 Both SNP 0053.scaffold00196 638779 1 G A scaffold13666 ScafM SNP 0053.scaffold00196 638799 1 C T scaffold13666 ScafM INDEL 0053.scaffold00196 638815 3 ... AAG scaffold13666 ReadM SNP 0053.scaffold00196 639329 1 G A - ReadM SNP 0053.scaffold00196 639340 1 G C - Both SNP 0053.scaffold00196 639561 1 T C scaffold13666 ScafM INDEL 0053.scaffold00196 639724 1 A . scaffold13666 Both SNP 0053.scaffold00196 639839 1 A T scaffold13666 Both SNP 0053.scaffold00196 639968 1 G A scaffold13666 ReadM SNP 0053.scaffold00196 640113 1 G A - ReadM SNP 0053.scaffold00196 640395 1 A G - Both SNP 0053.scaffold00196 640712 1 C T scaffold13666 Both SNP 0053.scaffold00196 640832 1 A T scaffold13666 Both SNP 0053.scaffold00196 640845 1 A T scaffold13666 ScafM INDEL 0053.scaffold00196 640860 1 . A scaffold13666 ReadM INDEL 0053.scaffold00196 640861 1 . T - Both SNP 0053.scaffold00196 640895 1 G A scaffold13666 Both SNP 0053.scaffold00196 641063 1 C T scaffold13666 Both SNP 0053.scaffold00196 641200 1 A G scaffold13666 Both SNP 0053.scaffold00196 641221 1 A T scaffold13666 Both SNP 0053.scaffold00196 641411 1 A C scaffold13666 ReadM SNP 0053.scaffold00196 641733 1 A G - ReadM SNP 0053.scaffold00196 641810 1 A G - Both SNP 0053.scaffold00196 642043 1 G C scaffold13666 Both INDEL 0053.scaffold00196 642054 1 . T scaffold13666 ReadM INDEL 0053.scaffold00196 642860 1 . A - ReadM INDEL 0053.scaffold00196 643082 1 . T - ScafM INDEL 0053.scaffold00196 643163 15 CCATGTACAGAAATG ............... scaffold13666 ScafM INDEL 0053.scaffold00196 643179 2 AG .. scaffold13666 ScafM INDEL 0053.scaffold00196 643182 8 ATTAATTA ........ scaffold13666 Both SNP 0053.scaffold00196 643621 1 G A scaffold13666 Both SNP 0053.scaffold00196 643652 1 A C scaffold13666 ScafM SNP 0053.scaffold00196 643918 1 A G scaffold13666 Both SNP 0053.scaffold00196 644182 1 G A scaffold13666 Both SNP 0053.scaffold00196 644413 1 T C scaffold13666 Both SNP 0053.scaffold00196 644508 1 T C scaffold13666 Both SNP 0053.scaffold00196 644716 1 T C scaffold13666 Both INDEL 0053.scaffold00196 644770 1 . T scaffold13666 Both SNP 0053.scaffold00196 644830 1 T C scaffold13666 Both INDEL 0053.scaffold00196 645087 1 . T scaffold13666 Both SNP 0053.scaffold00196 645143 1 C G scaffold13666 Both SNP 0053.scaffold00196 645347 1 T C scaffold13666 Both SNP 0053.scaffold00196 645408 1 A T scaffold13666 Both INDEL 0053.scaffold00196 645768 1 . T scaffold13666 Both SNP 0053.scaffold00196 646038 1 A C scaffold13666 Both SNP 0053.scaffold00196 646052 1 C T scaffold13666 ReadM SNP 0053.scaffold00196 646109 1 C T - ReadM SNP 0053.scaffold00196 646144 1 C T - Both SNP 0053.scaffold00196 646664 1 T G scaffold13666 Both SNP 0053.scaffold00196 647508 1 C A scaffold13666 Both SNP 0053.scaffold00196 647511 1 A C scaffold13666 Both SNP 0053.scaffold00196 647582 1 A T scaffold13666 Both SNP 0053.scaffold00196 647765 1 A G scaffold13666 Both SNP 0053.scaffold00196 647866 1 G A scaffold13666 ReadM INDEL 0053.scaffold00196 648126 1 . T - Both INDEL 0053.scaffold00196 648226 2 .. AA scaffold13666 ReadM SNP 0053.scaffold00196 648305 1 G A - Both SNP 0053.scaffold00196 649204 1 C T scaffold13666 Both INDEL 0053.scaffold00196 649249 1 . T scaffold13666 Both SNP 0053.scaffold00196 649345 1 A G scaffold13666 Both SNP 0053.scaffold00196 649366 1 C T scaffold13666 Both SNP 0053.scaffold00196 649375 1 T G scaffold13666 Both SNP 0053.scaffold00196 649437 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 649454 1 A G scaffold13666 ScafM INDEL 0053.scaffold00196 649462 3 ... TAG scaffold13666 Both SNP 0053.scaffold00196 649538 1 C T scaffold13666 Both SNP 0053.scaffold00196 649690 1 C T scaffold13666 ScafM INDEL 0053.scaffold00196 649699 1 A . scaffold13666 Both SNP 0053.scaffold00196 649716 1 T C scaffold13666 Both SNP 0053.scaffold00196 649731 1 T G scaffold13666 Both SNP 0053.scaffold00196 649795 1 G A scaffold13666 ScafM SNP 0053.scaffold00196 649827 1 A T scaffold13666 ScafM SNP 0053.scaffold00196 649833 1 G C scaffold13666 ScafM SNP 0053.scaffold00196 649842 1 A G scaffold13666 ScafM SNP 0053.scaffold00196 649845 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 649849 1 A T scaffold13666 ScafM INDEL 0053.scaffold00196 649927 12 ............ CTGAAAGGTTAG scaffold13666 Both SNP 0053.scaffold00196 649961 1 T G scaffold13666 Both SNP 0053.scaffold00196 650029 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 650396 1 C T scaffold13666 ScafM INDEL 0053.scaffold00196 650402 1 . A scaffold13666 ScafM SNP 0053.scaffold00196 650407 1 C A scaffold13666 ScafM SNP 0053.scaffold00196 650418 1 A T scaffold13666 ScafM SNP 0053.scaffold00196 650441 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 650459 1 A C scaffold13666 ScafM SNP 0053.scaffold00196 650513 1 T G scaffold13666 ScafM SNP 0053.scaffold00196 650517 1 T A scaffold13666 ScafM SNP 0053.scaffold00196 650521 2 GC AT scaffold13666 ScafM SNP 0053.scaffold00196 650579 1 C T scaffold13666 ScafM SNP 0053.scaffold00196 650584 1 G C scaffold13666 ScafM SNP 0053.scaffold00196 650613 1 G A scaffold13666 ScafM SNP 0053.scaffold00196 650615 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 650625 1 A G scaffold13666 ScafM SNP 0053.scaffold00196 650635 1 A G scaffold13666 ScafM SNP 0053.scaffold00196 650669 1 T G scaffold13666 ScafM SNP 0053.scaffold00196 650674 1 A G scaffold13666 ScafM SNP 0053.scaffold00196 650740 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 650745 1 T C scaffold13666 ScafM SNP 0053.scaffold00196 650747 1 G A scaffold13666 ScafM SNP 0053.scaffold00196 650754 1 G T scaffold13666 ScafM SNP 0053.scaffold00196 650783 1 A G scaffold13666 ReadM SNP 0053.scaffold00196 652463 1 T C - ReadM SNP 0053.scaffold00196 652843 1 C T - ReadM SNP 0053.scaffold00196 652914 1 T C - ScafM SNP 0053.scaffold00196 653380 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 653428 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 653575 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 653588 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 653624 1 T A scaffold6830 ScafM INDEL 0053.scaffold00196 653628 4 TAAC .... scaffold6830 ScafM SNP 0053.scaffold00196 653640 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 653642 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 653647 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 653670 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 653685 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 653746 2 TT AA scaffold6830 ScafM SNP 0053.scaffold00196 653778 2 TG CA scaffold6830 ScafM SNP 0053.scaffold00196 653782 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 653789 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 653805 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 653815 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 653824 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 653866 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 653870 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 653885 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 653920 1 G C scaffold6830 ScafM SNP 0053.scaffold00196 653926 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 653929 1 G T scaffold6830 ScafM INDEL 0053.scaffold00196 653958 1 . T scaffold6830 ScafM SNP 0053.scaffold00196 654003 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 654008 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 654016 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 654022 1 C T scaffold6830 ScafM INDEL 0053.scaffold00196 654040 1 . G scaffold6830 ScafM INDEL 0053.scaffold00196 654041 3 ... TCG scaffold6830 ScafM SNP 0053.scaffold00196 654070 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 654082 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 654129 2 TT AA scaffold6830 ScafM SNP 0053.scaffold00196 654143 2 AA TG scaffold6830 ScafM INDEL 0053.scaffold00196 654171 1 A . scaffold6830 ScafM INDEL 0053.scaffold00196 654189 2 .. TA scaffold6830 ScafM SNP 0053.scaffold00196 654223 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 654226 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 654228 1 G C scaffold6830 ScafM INDEL 0053.scaffold00196 654236 1 . A scaffold6830 ScafM SNP 0053.scaffold00196 654308 1 G A scaffold6830 ScafM INDEL 0053.scaffold00196 654314 1 G . scaffold6830 ScafM SNP 0053.scaffold00196 654335 1 C A scaffold6830 ScafM INDEL 0053.scaffold00196 654343 11 ........... CTAGTTCAATA scaffold6830 ScafM INDEL 0053.scaffold00196 654349 9 ......... ACATTAAAT scaffold6830 ScafM INDEL 0053.scaffold00196 654352 10 .......... ATCAAAAGAA scaffold6830 ScafM INDEL 0053.scaffold00196 654353 1 . G scaffold6830 ScafM INDEL 0053.scaffold00196 654354 1 . C scaffold6830 ScafM INDEL 0053.scaffold00196 654356 1 . G scaffold6830 ScafM SNP 0053.scaffold00196 654363 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 654365 2 GA TG scaffold6830 ScafM SNP 0053.scaffold00196 654378 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 654385 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 654398 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654420 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654445 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654455 1 C G scaffold6830 ScafM SNP 0053.scaffold00196 654457 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 654485 2 GA AG scaffold6830 ScafM SNP 0053.scaffold00196 654514 2 CG AA scaffold6830 ScafM SNP 0053.scaffold00196 654540 1 G C scaffold6830 ScafM SNP 0053.scaffold00196 654550 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 654572 2 CC TT scaffold6830 ScafM SNP 0053.scaffold00196 654587 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654596 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654616 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 654635 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 654664 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 654666 1 C T scaffold6830 ScafM INDEL 0053.scaffold00196 654687 1 C . scaffold6830 ScafM INDEL 0053.scaffold00196 654705 2 .. CA scaffold6830 ScafM INDEL 0053.scaffold00196 654710 14 .............. GCCACCAGCCCCCC scaffold6830 ScafM INDEL 0053.scaffold00196 654711 2 .. AT scaffold6830 ScafM INDEL 0053.scaffold00196 654741 1 . A scaffold6830 ScafM SNP 0053.scaffold00196 654747 1 T C scaffold6830 ScafM INDEL 0053.scaffold00196 654777 1 . C scaffold6830 ScafM SNP 0053.scaffold00196 655412 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 655436 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 655439 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 655442 1 C G scaffold6830 ScafM SNP 0053.scaffold00196 657310 1 A T scaffold6830 ScafM INDEL 0053.scaffold00196 657314 1 A . scaffold6830 ScafM SNP 0053.scaffold00196 657317 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657324 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 657340 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 657342 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 657349 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 657362 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 657393 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657420 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 657426 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657440 1 G A scaffold6830 ScafM INDEL 0053.scaffold00196 657454 1 . C scaffold6830 ScafM INDEL 0053.scaffold00196 657455 1 . C scaffold6830 ScafM INDEL 0053.scaffold00196 657456 1 . C scaffold6830 ScafM INDEL 0053.scaffold00196 657457 1 . C scaffold6830 ScafM SNP 0053.scaffold00196 657459 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657465 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657492 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 657529 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 657574 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657586 1 C A scaffold6830 ScafM INDEL 0053.scaffold00196 657613 3 ... TTT scaffold6830 ScafM INDEL 0053.scaffold00196 657615 3 .CC AAA scaffold6830 ScafM INDEL 0053.scaffold00196 657659 2 .. TC scaffold6830 ScafM SNP 0053.scaffold00196 657687 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 657703 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657732 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 657742 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 657776 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 657787 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 657797 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 657815 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 657859 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 657878 1 A G scaffold6830 ScafM INDEL 0053.scaffold00196 657889 4 TTCA .... scaffold6830 ScafM INDEL 0053.scaffold00196 660145 1 . G scaffold6830 ScafM SNP 0053.scaffold00196 660367 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 660897 1 T C scaffold17746 ScafM SNP 0053.scaffold00196 660901 1 T C scaffold17746 ScafM SNP 0053.scaffold00196 660945 1 A G scaffold17746 ScafM SNP 0053.scaffold00196 660957 1 G A scaffold17746 ScafM SNP 0053.scaffold00196 660964 1 C T scaffold17746 ScafM SNP 0053.scaffold00196 660970 1 A G scaffold17746 ScafM SNP 0053.scaffold00196 661078 1 T A scaffold17746 ScafM INDEL 0053.scaffold00196 661085 3 AAC ... scaffold17746 ScafM SNP 0053.scaffold00196 661091 1 A G scaffold17746 ScafM INDEL 0053.scaffold00196 661110 1 A . scaffold17746 ScafM INDEL 0053.scaffold00196 661118 1 . G scaffold17746 ScafM SNP 0053.scaffold00196 661161 1 T C scaffold17746 ScafM SNP 0053.scaffold00196 661163 1 G A scaffold17746 ReadM SNP 0053.scaffold00196 662485 1 A C - ScafM INDEL 0053.scaffold00196 668580 1 . T scaffold6830 ScafM SNP 0053.scaffold00196 668583 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668612 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 668628 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668633 1 C G scaffold6830 ScafM SNP 0053.scaffold00196 668665 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 668737 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 668748 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 668763 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668791 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668804 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 668810 1 C G scaffold6830 ScafM SNP 0053.scaffold00196 668835 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668837 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 668853 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 668909 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 668921 1 C A scaffold6830 ScafM INDEL 0053.scaffold00196 668943 2 .. AA scaffold6830 ScafM SNP 0053.scaffold00196 668959 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 668975 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 669027 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 669208 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 669219 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 669227 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 669238 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669244 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 669259 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669261 1 G A scaffold6830 ScafM INDEL 0053.scaffold00196 669295 22 ...................... GGTTTTGAATTTTGTTGAAGCT scaffold6830 Both SNP 0053.scaffold00196 669355 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 669435 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669476 2 GG TT scaffold6830 ScafM SNP 0053.scaffold00196 669497 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669549 1 C T scaffold6830 Both INDEL 0053.scaffold00196 669627 1 C . scaffold6830 Both SNP 0053.scaffold00196 669633 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 669644 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 669664 1 T G scaffold6830 ScafM INDEL 0053.scaffold00196 669669 2 TC .. scaffold6830 ScafM INDEL 0053.scaffold00196 669693 1 C . scaffold6830 ScafM SNP 0053.scaffold00196 669695 2 GT TC scaffold6830 ScafM SNP 0053.scaffold00196 669712 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669747 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 669755 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 669775 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 669778 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 669798 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 669828 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669831 1 C A scaffold6830 ScafM INDEL 0053.scaffold00196 669853 1 . T scaffold6830 ScafM INDEL 0053.scaffold00196 669861 7 ....... ATTTGAA scaffold6830 ScafM SNP 0053.scaffold00196 669914 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 669918 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 669985 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 670008 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670025 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 670033 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670040 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 670048 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 670468 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 670476 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670505 1 T G scaffold6830 ScafM INDEL 0053.scaffold00196 670557 1 . C scaffold6830 ScafM SNP 0053.scaffold00196 670567 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670594 1 A T scaffold6830 ScafM SNP 0053.scaffold00196 670632 2 GT CC scaffold6830 ScafM SNP 0053.scaffold00196 670655 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 670669 1 C G scaffold6830 ScafM SNP 0053.scaffold00196 670691 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 670695 1 T A scaffold6830 ScafM SNP 0053.scaffold00196 670732 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670742 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670774 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670783 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670788 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670808 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670825 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670834 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670873 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670890 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 670926 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670941 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 670944 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 670953 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670958 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 670968 1 G T scaffold6830 ScafM SNP 0053.scaffold00196 670980 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 670988 1 C T scaffold6830 ScafM INDEL 0053.scaffold00196 671008 28 ............................ TTTTTGTCAGCACCGCGCCGAGTCGCTA scaffold6830 ScafM INDEL 0053.scaffold00196 671009 1 . A scaffold6830 ScafM SNP 0053.scaffold00196 671049 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 671054 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671077 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671088 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671094 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 671096 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671099 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 671118 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 671131 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671139 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671144 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671163 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671165 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671174 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671181 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 671185 1 A C scaffold6830 ScafM SNP 0053.scaffold00196 671187 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671191 2 GC AA scaffold6830 ScafM SNP 0053.scaffold00196 671235 1 C A scaffold6830 ScafM SNP 0053.scaffold00196 671244 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671269 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 671280 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671283 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671290 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671296 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671302 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 671314 2 AC GG scaffold6830 ScafM SNP 0053.scaffold00196 671325 4 GGGG TTCC scaffold6830 ScafM SNP 0053.scaffold00196 671330 3 GAG CTA scaffold6830 ScafM SNP 0053.scaffold00196 671336 2 CC TT scaffold6830 ScafM SNP 0053.scaffold00196 671339 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671341 2 AG TT scaffold6830 ScafM INDEL 0053.scaffold00196 671343 1 . G scaffold6830 ScafM SNP 0053.scaffold00196 671374 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671379 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671388 2 TC CG scaffold6830 ScafM SNP 0053.scaffold00196 671395 1 A G scaffold6830 ScafM SNP 0053.scaffold00196 671397 1 G A scaffold6830 ScafM SNP 0053.scaffold00196 671406 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 671457 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671471 1 T G scaffold6830 ScafM SNP 0053.scaffold00196 671476 1 C T scaffold6830 ScafM SNP 0053.scaffold00196 671480 2 TC AA scaffold6830 ScafM SNP 0053.scaffold00196 671492 1 T C scaffold6830 ScafM SNP 0053.scaffold00196 682135 1 A T scaffold3069 ScafM SNP 0053.scaffold00196 682143 3 CCT TTG scaffold3069 ScafM SNP 0053.scaffold00196 682165 1 T C scaffold3069 ScafM SNP 0053.scaffold00196 682216 1 G C scaffold3069 ScafM SNP 0053.scaffold00196 682240 1 G A scaffold3069 ScafM SNP 0053.scaffold00196 682288 1 G A scaffold3069 ScafM SNP 0053.scaffold00196 682317 1 T A scaffold3069 ScafM SNP 0053.scaffold00196 694403 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694405 1 G C scaffold5400 ScafM SNP 0053.scaffold00196 694408 1 G C scaffold5400 ScafM SNP 0053.scaffold00196 694414 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694420 2 CG AA scaffold5400 ScafM SNP 0053.scaffold00196 694431 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694441 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694445 1 C A scaffold5400 ScafM SNP 0053.scaffold00196 694448 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694454 1 C A scaffold5400 ScafM SNP 0053.scaffold00196 694458 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694464 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694471 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694473 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694475 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694482 1 A G scaffold5400 ScafM INDEL 0053.scaffold00196 694492 1 . G scaffold5400 ScafM INDEL 0053.scaffold00196 694493 2 .C AA scaffold5400 ScafM SNP 0053.scaffold00196 694498 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 694503 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694508 1 A T scaffold5400 ScafM SNP 0053.scaffold00196 694511 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694513 1 C A scaffold5400 ScafM SNP 0053.scaffold00196 694518 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694521 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 694523 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694525 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694532 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694534 1 C A scaffold5400 ScafM SNP 0053.scaffold00196 694538 1 C G scaffold5400 ScafM SNP 0053.scaffold00196 694543 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 694552 2 AC GT scaffold5400 ScafM SNP 0053.scaffold00196 694569 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 694575 1 G C scaffold5400 ScafM SNP 0053.scaffold00196 694578 2 GG CA scaffold5400 ScafM SNP 0053.scaffold00196 694584 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694586 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694589 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694601 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694606 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694652 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694662 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694667 1 C T scaffold5400 ScafM INDEL 0053.scaffold00196 694686 6 ...... ATTTGG scaffold5400 ScafM INDEL 0053.scaffold00196 694687 5 ....C AGAAG scaffold5400 ScafM INDEL 0053.scaffold00196 694691 3 ... GAG scaffold5400 ScafM INDEL 0053.scaffold00196 694693 5 ..... TAATC scaffold5400 ScafM INDEL 0053.scaffold00196 694696 2 .. AG scaffold5400 ScafM SNP 0053.scaffold00196 694699 1 G C scaffold5400 ScafM INDEL 0053.scaffold00196 694702 2 .. AC scaffold5400 ScafM SNP 0053.scaffold00196 694707 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694713 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694719 1 G A scaffold5400 ScafM INDEL 0053.scaffold00196 694726 2 .C AA scaffold5400 ScafM INDEL 0053.scaffold00196 694731 1 T . scaffold5400 ScafM SNP 0053.scaffold00196 694736 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694743 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694748 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694752 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694754 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694759 1 C G scaffold5400 ScafM SNP 0053.scaffold00196 694766 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694772 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694777 1 A T scaffold5400 ScafM SNP 0053.scaffold00196 694782 1 C G scaffold5400 ScafM SNP 0053.scaffold00196 694785 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 694789 1 A C scaffold5400 ScafM SNP 0053.scaffold00196 694799 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694803 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694811 1 T G scaffold5400 ScafM SNP 0053.scaffold00196 694817 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694820 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 694822 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 694827 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 694836 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 694838 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694840 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 694847 1 A G scaffold5400 ScafM INDEL 0053.scaffold00196 694867 1 . A scaffold5400 ScafM SNP 0053.scaffold00196 694876 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 694878 1 A T scaffold5400 ScafM SNP 0053.scaffold00196 694881 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 694894 2 AA TG scaffold5400 ScafM SNP 0053.scaffold00196 694910 1 T C scaffold5400 ScafM INDEL 0053.scaffold00196 694926 1 . G scaffold5400 ScafM SNP 0053.scaffold00196 694928 1 G T scaffold5400 ScafM INDEL 0053.scaffold00196 694930 1 A . scaffold5400 ScafM SNP 0053.scaffold00196 694938 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 695190 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 695194 1 A T scaffold5400 ScafM SNP 0053.scaffold00196 695196 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695202 1 G T scaffold5400 ScafM SNP 0053.scaffold00196 695205 1 G C scaffold5400 ScafM INDEL 0053.scaffold00196 695228 1 C . scaffold5400 ScafM SNP 0053.scaffold00196 695232 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 695240 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 695242 2 GG AA scaffold5400 ScafM SNP 0053.scaffold00196 695245 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695249 1 A T scaffold5400 ScafM SNP 0053.scaffold00196 695252 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 695262 1 T A scaffold5400 ScafM SNP 0053.scaffold00196 695268 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695272 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695278 1 T G scaffold5400 ScafM SNP 0053.scaffold00196 695281 1 C G scaffold5400 ScafM SNP 0053.scaffold00196 695286 3 CAA TGG scaffold5400 ScafM SNP 0053.scaffold00196 695290 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695298 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 695301 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695306 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695313 2 CA TC scaffold5400 ScafM SNP 0053.scaffold00196 695317 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 695320 1 A C scaffold5400 ScafM SNP 0053.scaffold00196 695324 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695326 2 TA CT scaffold5400 ScafM SNP 0053.scaffold00196 695329 1 T G scaffold5400 ScafM SNP 0053.scaffold00196 695332 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695338 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695342 1 G A scaffold5400 ScafM INDEL 0053.scaffold00196 695347 2 AT .C scaffold5400 ScafM SNP 0053.scaffold00196 695350 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695353 1 A C scaffold5400 ScafM SNP 0053.scaffold00196 695375 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695382 3 TCT ATG scaffold5400 ScafM SNP 0053.scaffold00196 695386 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695389 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695392 1 G A scaffold5400 ScafM INDEL 0053.scaffold00196 695394 1 C . scaffold5400 ScafM SNP 0053.scaffold00196 695398 1 T C scaffold5400 ScafM SNP 0053.scaffold00196 695401 2 AA GG scaffold5400 ScafM INDEL 0053.scaffold00196 695403 1 . A scaffold5400 ScafM SNP 0053.scaffold00196 695412 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695421 4 CCAT TTGC scaffold5400 ScafM SNP 0053.scaffold00196 695427 1 T G scaffold5400 ScafM SNP 0053.scaffold00196 695431 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695433 2 CA TG scaffold5400 ScafM INDEL 0053.scaffold00196 695450 1 . C scaffold5400 ScafM SNP 0053.scaffold00196 695454 2 TG CA scaffold5400 ScafM SNP 0053.scaffold00196 695457 1 C T scaffold5400 ScafM SNP 0053.scaffold00196 695459 1 G A scaffold5400 ScafM SNP 0053.scaffold00196 695461 2 TA GG scaffold5400 ScafM SNP 0053.scaffold00196 695464 1 A G scaffold5400 ScafM SNP 0053.scaffold00196 695469 1 T G scaffold5400 ScafM SNP 0053.scaffold00196 695475 1 A C scaffold5400 ScafM SNP 0053.scaffold00196 695488 1 A T scaffold5400 ScafM INDEL 0053.scaffold00196 695609 1 A . scaffold8192 ScafM SNP 0053.scaffold00196 695617 1 A C scaffold8192 ScafM SNP 0053.scaffold00196 695630 1 G A scaffold8192 ScafM SNP 0053.scaffold00196 695690 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695706 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695725 1 G A scaffold8192 ScafM SNP 0053.scaffold00196 695738 1 A T scaffold8192 ScafM SNP 0053.scaffold00196 695765 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695773 1 G A scaffold8192 ScafM SNP 0053.scaffold00196 695781 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695812 1 C T scaffold8192 ScafM SNP 0053.scaffold00196 695836 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695883 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695886 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 695906 2 CG TA scaffold8192 ScafM SNP 0053.scaffold00196 695933 1 T C scaffold8192 ScafM SNP 0053.scaffold00196 695942 1 T G scaffold8192 ScafM SNP 0053.scaffold00196 695947 1 C T scaffold8192 ScafM SNP 0053.scaffold00196 696013 1 G A scaffold8192 ScafM SNP 0053.scaffold00196 696019 2 CA TG scaffold8192 ScafM SNP 0053.scaffold00196 696042 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 696049 1 C T scaffold8192 ScafM SNP 0053.scaffold00196 696073 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 696088 1 C G scaffold8192 ScafM SNP 0053.scaffold00196 696094 1 C T scaffold8192 ScafM SNP 0053.scaffold00196 696113 1 A C scaffold8192 ScafM SNP 0053.scaffold00196 696121 1 T C scaffold8192 ScafM SNP 0053.scaffold00196 696133 1 T C scaffold8192 ScafM SNP 0053.scaffold00196 696137 1 A G scaffold8192 ScafM SNP 0053.scaffold00196 696183 1 A T scaffold8192 ScafM SNP 0053.scaffold00196 696189 1 C T scaffold8192 ReadM SNP 0053.scaffold00196 703215 1 C A - ReadM SNP 0053.scaffold00196 703222 1 G C - ScafM SNP 0053.scaffold00196 705336 2 AA TT scaffold19681 ScafM SNP 0053.scaffold00196 705361 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 705375 1 C T scaffold19681 ScafM INDEL 0053.scaffold00196 705385 4 .... AAAT scaffold19681 ScafM INDEL 0053.scaffold00196 705390 1 . T scaffold19681 Both SNP 0053.scaffold00196 705439 1 G A scaffold19681 Both SNP 0053.scaffold00196 705454 1 C G scaffold19681 ReadM SNP 0053.scaffold00196 705499 1 G A - ReadM SNP 0053.scaffold00196 705910 1 G A - ReadM SNP 0053.scaffold00196 705941 1 G T - ReadM SNP 0053.scaffold00196 705979 1 C T - ReadM SNP 0053.scaffold00196 705993 1 T C - ReadM SNP 0053.scaffold00196 706258 1 C T - ReadM SNP 0053.scaffold00196 706388 1 G A - ReadM SNP 0053.scaffold00196 706663 1 G A - ScafM SNP 0053.scaffold00196 707700 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 707747 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 707753 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 707775 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 707781 2 GG AA scaffold19681 ScafM INDEL 0053.scaffold00196 707813 1 T . scaffold19681 ScafM SNP 0053.scaffold00196 707828 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 707832 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 707848 1 G C scaffold19681 ScafM SNP 0053.scaffold00196 707900 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 707929 1 G A scaffold19681 ScafM INDEL 0053.scaffold00196 707941 1 A . scaffold19681 ScafM SNP 0053.scaffold00196 707965 1 C A scaffold19681 ScafM SNP 0053.scaffold00196 707971 1 G A scaffold19681 ScafM INDEL 0053.scaffold00196 708073 5 TAATT ..... scaffold19681 ScafM INDEL 0053.scaffold00196 708090 1 . C scaffold19681 ScafM SNP 0053.scaffold00196 708097 1 A T scaffold19681 ScafM SNP 0053.scaffold00196 708631 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 708668 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 708681 1 G T scaffold19681 ScafM SNP 0053.scaffold00196 708707 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 708714 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 708744 1 G A scaffold19681 ScafM INDEL 0053.scaffold00196 708789 3 TTT ... scaffold19681 ScafM SNP 0053.scaffold00196 708799 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 708885 1 A T scaffold19681 ScafM SNP 0053.scaffold00196 708889 1 T C scaffold19681 ScafM SNP 0053.scaffold00196 708898 1 A T scaffold19681 ScafM SNP 0053.scaffold00196 708920 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 708929 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 708938 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 708956 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 708964 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 708976 2 TT AG scaffold19681 ScafM SNP 0053.scaffold00196 708982 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 709003 1 A G scaffold19681 Both SNP 0053.scaffold00196 709008 1 A T scaffold19681 Both SNP 0053.scaffold00196 709114 1 C T scaffold19681 Both SNP 0053.scaffold00196 709344 1 G C scaffold19681 Both SNP 0053.scaffold00196 709479 1 A G scaffold19681 Both SNP 0053.scaffold00196 709530 1 G A scaffold19681 Both SNP 0053.scaffold00196 709555 1 G A scaffold19681 Both SNP 0053.scaffold00196 709648 1 T C scaffold19681 ScafM SNP 0053.scaffold00196 709655 1 A T scaffold19681 Both SNP 0053.scaffold00196 709690 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 709725 1 G C scaffold19681 ScafM INDEL 0053.scaffold00196 709727 10 TAGGAAGATA .......... scaffold19681 Both SNP 0053.scaffold00196 709766 1 G A scaffold19681 Both SNP 0053.scaffold00196 709785 1 T C scaffold19681 Both SNP 0053.scaffold00196 709798 1 A T scaffold19681 Both SNP 0053.scaffold00196 709858 1 A G scaffold19681 ReadM SNP 0053.scaffold00196 709901 1 C T - ReadM SNP 0053.scaffold00196 709905 1 A T - ReadM SNP 0053.scaffold00196 710007 1 A G - Both SNP 0053.scaffold00196 710106 1 G A scaffold19681 Both SNP 0053.scaffold00196 710118 1 A G scaffold19681 Both INDEL 0053.scaffold00196 710417 1 C . scaffold19681 Both SNP 0053.scaffold00196 710427 1 G A scaffold19681 Both SNP 0053.scaffold00196 710521 1 T C scaffold19681 Both SNP 0053.scaffold00196 710646 1 T A scaffold19681 Both SNP 0053.scaffold00196 710656 1 T A scaffold19681 Both SNP 0053.scaffold00196 710804 1 G A scaffold19681 Both SNP 0053.scaffold00196 710828 1 T A scaffold19681 ScafM INDEL 0053.scaffold00196 710867 1 T . scaffold19681 ScafM SNP 0053.scaffold00196 710870 1 C A scaffold19681 ScafM SNP 0053.scaffold00196 710884 1 G A scaffold19681 Both SNP 0053.scaffold00196 710899 1 A G scaffold19681 Both SNP 0053.scaffold00196 710968 1 T G scaffold19681 Both SNP 0053.scaffold00196 710982 1 G T scaffold19681 Both SNP 0053.scaffold00196 711012 1 G T scaffold19681 ScafM SNP 0053.scaffold00196 711040 1 A C scaffold19681 ScafM SNP 0053.scaffold00196 711045 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 711064 2 TA AC scaffold19681 Both SNP 0053.scaffold00196 711137 1 G C scaffold19681 Both SNP 0053.scaffold00196 711190 1 G A scaffold19681 Both SNP 0053.scaffold00196 711224 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 711230 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 711238 1 T C scaffold19681 Both INDEL 0053.scaffold00196 711262 2 .. AC scaffold19681 Both SNP 0053.scaffold00196 711307 1 G A scaffold19681 ScafM INDEL 0053.scaffold00196 711351 3 AGC ... scaffold19681 Both SNP 0053.scaffold00196 711401 1 A T scaffold19681 Both SNP 0053.scaffold00196 711417 1 C A scaffold19681 Both SNP 0053.scaffold00196 711473 1 C A scaffold19681 Both SNP 0053.scaffold00196 711526 1 G T scaffold19681 Both SNP 0053.scaffold00196 711539 1 A G scaffold19681 Both SNP 0053.scaffold00196 711591 1 T C scaffold19681 Both SNP 0053.scaffold00196 711659 1 T A scaffold19681 Both SNP 0053.scaffold00196 711696 1 A T scaffold19681 Both INDEL 0053.scaffold00196 711784 1 A . scaffold19681 Both SNP 0053.scaffold00196 711899 1 A C scaffold19681 ReadM SNP 0053.scaffold00196 711967 1 G C - ReadM SNP 0053.scaffold00196 711986 1 C T - ReadM SNP 0053.scaffold00196 712017 1 G C - Both INDEL 0053.scaffold00196 712098 1 T . scaffold19681 ScafM SNP 0053.scaffold00196 712102 1 G C scaffold19681 Both SNP 0053.scaffold00196 712253 1 T G scaffold19681 Both SNP 0053.scaffold00196 712299 1 A T scaffold19681 Both SNP 0053.scaffold00196 712349 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 712364 1 A T scaffold19681 Both SNP 0053.scaffold00196 712437 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 712453 1 C G scaffold19681 ScafM SNP 0053.scaffold00196 712456 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 712470 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 712485 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 712501 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 712562 1 C T scaffold19681 ScafM INDEL 0053.scaffold00196 712583 8 ........ AATTCAAG scaffold19681 ScafM INDEL 0053.scaffold00196 712598 2 .T AA scaffold19681 Both SNP 0053.scaffold00196 712619 1 G A scaffold19681 Both SNP 0053.scaffold00196 712640 1 A T scaffold19681 Both SNP 0053.scaffold00196 712706 1 A G scaffold19681 ScafM INDEL 0053.scaffold00196 712761 5 ..... GAAAT scaffold19681 ScafM SNP 0053.scaffold00196 712771 1 A T scaffold19681 Both SNP 0053.scaffold00196 712926 1 G A scaffold19681 Both SNP 0053.scaffold00196 712962 1 G A scaffold19681 Both SNP 0053.scaffold00196 712970 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 712999 1 A C scaffold19681 ScafM SNP 0053.scaffold00196 713009 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 713030 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 713104 1 A G scaffold19681 ScafM SNP 0053.scaffold00196 713110 1 T C scaffold19681 ScafM SNP 0053.scaffold00196 713114 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 713135 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 713152 1 A G scaffold19681 ScafM INDEL 0053.scaffold00196 713161 1 A . scaffold19681 ReadM SNP 0053.scaffold00196 713260 1 C T - ReadM SNP 0053.scaffold00196 713273 1 A G - ReadM SNP 0053.scaffold00196 713393 1 C G - ReadM SNP 0053.scaffold00196 713407 1 G A - Both SNP 0053.scaffold00196 713428 1 A G scaffold19681 Both SNP 0053.scaffold00196 713507 1 A G scaffold19681 ScafM INDEL 0053.scaffold00196 713508 8 ........ GAAAATTG scaffold19681 ScafM SNP 0053.scaffold00196 713574 1 T A scaffold19681 ScafM SNP 0053.scaffold00196 713577 1 C T scaffold19681 ScafM SNP 0053.scaffold00196 713581 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 713601 1 G T scaffold19681 ScafM SNP 0053.scaffold00196 713616 1 G A scaffold19681 ReadM INDEL 0053.scaffold00196 713687 1 . A - Both SNP 0053.scaffold00196 713894 1 G C scaffold19681 Both INDEL 0053.scaffold00196 713899 1 G . scaffold19681 Both SNP 0053.scaffold00196 713917 1 T G scaffold19681 Both SNP 0053.scaffold00196 714038 1 A T scaffold19681 Both SNP 0053.scaffold00196 714092 1 C G scaffold19681 Both SNP 0053.scaffold00196 714103 1 T A scaffold19681 Both SNP 0053.scaffold00196 714205 1 A G scaffold19681 Both SNP 0053.scaffold00196 714224 1 A G scaffold19681 Both SNP 0053.scaffold00196 714235 1 A G scaffold19681 ScafM INDEL 0053.scaffold00196 714363 6 ...... AGGTAT scaffold19681 ScafM SNP 0053.scaffold00196 714370 1 T G scaffold19681 Both SNP 0053.scaffold00196 714423 1 G A scaffold19681 ScafM SNP 0053.scaffold00196 714466 1 G C scaffold19681 Both SNP 0053.scaffold00196 714559 1 C T scaffold19681 Both SNP 0053.scaffold00196 714605 1 T C scaffold19681 Both SNP 0053.scaffold00196 714641 1 G C scaffold19681 ScafM SNP 0053.scaffold00196 714645 1 G C scaffold19681 ScafM SNP 0053.scaffold00196 714745 2 AA GG scaffold19681 Both INDEL 0053.scaffold00196 714794 1 A . scaffold19681 Both INDEL 0053.scaffold00196 714881 1 C . scaffold19681 ScafM INDEL 0053.scaffold00196 715002 2 .. GA scaffold19681 Both SNP 0053.scaffold00196 715052 1 A G scaffold19681 Both SNP 0053.scaffold00196 715061 1 G A scaffold19681 Both SNP 0053.scaffold00196 715129 1 T A scaffold19681 Both INDEL 0053.scaffold00196 715139 1 . T scaffold19681 Both SNP 0053.scaffold00196 715188 1 T C scaffold19681 Both SNP 0053.scaffold00196 715363 1 C T scaffold19681 Both SNP 0053.scaffold00196 715369 1 A T scaffold19681 ReadM SNP 0053.scaffold00196 716260 1 A G - ReadM SNP 0053.scaffold00196 716454 1 A G - ReadM SNP 0053.scaffold00196 716548 1 T C - ReadM SNP 0053.scaffold00196 716576 1 C G - ReadM SNP 0053.scaffold00196 716664 1 G A - ReadM SNP 0053.scaffold00196 716705 1 G A - ReadM SNP 0053.scaffold00196 716730 1 C T - ReadM SNP 0053.scaffold00196 716766 1 A T - ReadM SNP 0053.scaffold00196 717117 1 A T - ReadM SNP 0053.scaffold00196 717326 1 C T - ReadM INDEL 0053.scaffold00196 717450 2 AA .. - ReadM SNP 0053.scaffold00196 717467 1 A G - ReadM SNP 0053.scaffold00196 717816 1 G A - ReadM SNP 0053.scaffold00196 718065 1 C A - ReadM SNP 0053.scaffold00196 718094 1 G T - ReadM INDEL 0053.scaffold00196 718114 1 A . - ReadM SNP 0053.scaffold00196 718243 1 T C - ReadM SNP 0053.scaffold00196 718352 1 C G - ReadM SNP 0053.scaffold00196 718515 1 T C - ReadM SNP 0053.scaffold00196 718589 1 G A - ReadM SNP 0053.scaffold00196 718677 1 T C - ReadM SNP 0053.scaffold00196 718771 1 C T - ReadM SNP 0053.scaffold00196 719245 1 T C - ReadM SNP 0053.scaffold00196 719354 1 G A - ReadM SNP 0053.scaffold00196 719536 1 G C - ReadM SNP 0053.scaffold00196 720401 1 A G - ReadM SNP 0053.scaffold00196 720761 1 A G - ReadM SNP 0053.scaffold00196 720827 1 G A - ReadM SNP 0053.scaffold00196 721420 1 G T - ReadM SNP 0053.scaffold00196 721778 1 A T - ReadM SNP 0053.scaffold00196 723306 1 C T - ReadM SNP 0053.scaffold00196 725849 1 C A - ReadM INDEL 0053.scaffold00196 728591 2 .. AA - ReadM SNP 0053.scaffold00196 728671 1 A T - ReadM SNP 0053.scaffold00196 729612 1 G A - ReadM SNP 0053.scaffold00196 729792 1 A C - ReadM SNP 0053.scaffold00196 730161 1 C T - ReadM INDEL 0053.scaffold00196 730169 1 . A - ReadM SNP 0053.scaffold00196 730459 1 A G - ReadM SNP 0053.scaffold00196 730906 1 C G - ReadM SNP 0053.scaffold00196 731129 1 G T - ReadM SNP 0053.scaffold00196 731443 1 T C - ReadM SNP 0053.scaffold00196 731952 1 A T - ReadM SNP 0053.scaffold00196 732013 1 G A - Both SNP 0053.scaffold00196 732147 1 C A scaffold9356 Both SNP 0053.scaffold00196 732238 1 A C scaffold9356 ReadM SNP 0053.scaffold00196 732417 1 T C - ReadM SNP 0053.scaffold00196 732478 1 T C - ReadM SNP 0053.scaffold00196 732482 1 C T - ReadM SNP 0053.scaffold00196 732664 1 A T - ReadM SNP 0053.scaffold00196 732991 1 A C - ReadM SNP 0053.scaffold00196 733059 1 T A - ReadM SNP 0053.scaffold00196 733318 1 C T - ReadM SNP 0053.scaffold00196 733626 1 A G - ReadM SNP 0053.scaffold00196 734084 1 G A - ReadM SNP 0053.scaffold00196 734241 1 T C - ReadM SNP 0053.scaffold00196 734251 1 G A - ReadM SNP 0053.scaffold00196 735499 1 A G - ReadM SNP 0053.scaffold00196 735555 2 TT GA - ReadM SNP 0053.scaffold00196 735794 1 T C - ReadM SNP 0053.scaffold00196 735910 1 T A - ReadM SNP 0053.scaffold00196 736008 1 C T - ReadM SNP 0053.scaffold00196 736275 1 A G - ReadM SNP 0053.scaffold00196 736290 1 G C - ReadM SNP 0053.scaffold00196 736470 1 T C - ReadM SNP 0053.scaffold00196 736515 1 C T - ReadM SNP 0053.scaffold00196 736556 1 A T - ReadM SNP 0053.scaffold00196 736567 1 T A - ReadM SNP 0053.scaffold00196 736798 1 G A - ReadM SNP 0053.scaffold00196 736964 1 C T - ReadM SNP 0053.scaffold00196 737141 1 G A - ReadM SNP 0053.scaffold00196 737176 1 T C - ReadM SNP 0053.scaffold00196 737306 1 A G - ReadM SNP 0053.scaffold00196 737356 1 A G - ReadM SNP 0053.scaffold00196 737364 1 T C - ReadM SNP 0053.scaffold00196 737459 1 A C - ReadM SNP 0053.scaffold00196 737504 1 C T - ReadM SNP 0053.scaffold00196 737616 1 C T - ReadM SNP 0053.scaffold00196 737619 1 G A - ReadM SNP 0053.scaffold00196 737665 1 G A - ReadM SNP 0053.scaffold00196 737684 1 A G - ReadM SNP 0053.scaffold00196 737703 1 T C - ReadM SNP 0053.scaffold00196 737870 1 C T - ReadM SNP 0053.scaffold00196 738096 1 A G - ReadM SNP 0053.scaffold00196 738208 1 C T - ReadM SNP 0053.scaffold00196 738512 1 T C - ReadM SNP 0053.scaffold00196 739034 1 T C - ReadM SNP 0053.scaffold00196 739057 1 A T - ReadM SNP 0053.scaffold00196 739094 1 A T - Both SNP 0053.scaffold00196 739626 1 C T scaffold9356 Both SNP 0053.scaffold00196 739643 1 G A scaffold9356 Both SNP 0053.scaffold00196 739665 1 A G scaffold9356 Both SNP 0053.scaffold00196 739784 1 C T scaffold9356 Both SNP 0053.scaffold00196 739787 1 C G scaffold9356 Both SNP 0053.scaffold00196 739877 1 A C scaffold9356 Both SNP 0053.scaffold00196 739884 1 A G scaffold9356 ReadM SNP 0053.scaffold00196 740107 1 G A - ReadM SNP 0053.scaffold00196 740148 1 G A - ReadM INDEL 0053.scaffold00196 740195 1 T . - ReadM SNP 0053.scaffold00196 740514 1 C A - ReadM SNP 0053.scaffold00196 740821 1 T C - ReadM SNP 0053.scaffold00196 741109 1 G A - ReadM SNP 0053.scaffold00196 741361 1 C A - Both SNP 0053.scaffold00196 742352 1 A G scaffold9356 Both SNP 0053.scaffold00196 742362 1 G A scaffold9356 Both SNP 0053.scaffold00196 742512 1 G C scaffold9356 Both SNP 0053.scaffold00196 742594 1 A G scaffold9356 Both INDEL 0053.scaffold00196 742666 1 . T scaffold9356 Both SNP 0053.scaffold00196 742760 1 A G scaffold9356 Both INDEL 0053.scaffold00196 742871 1 . T scaffold9356 Both SNP 0053.scaffold00196 742885 1 C T scaffold9356 Both SNP 0053.scaffold00196 742923 1 A T scaffold9356 ScafM SNP 0053.scaffold00196 742990 1 A T scaffold9356 Both SNP 0053.scaffold00196 742997 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 743157 1 T C - ReadM SNP 0053.scaffold00196 743335 1 C A - ReadM SNP 0053.scaffold00196 743349 1 G T - ReadM SNP 0053.scaffold00196 743411 1 T C - ReadM SNP 0053.scaffold00196 743434 1 T A - ReadM SNP 0053.scaffold00196 743547 1 C A - ReadM SNP 0053.scaffold00196 743626 1 A G - ReadM SNP 0053.scaffold00196 743636 1 G A - ReadM SNP 0053.scaffold00196 743970 1 A G - Both SNP 0053.scaffold00196 744007 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 744210 1 T C - ReadM INDEL 0053.scaffold00196 744219 1 T . - ReadM INDEL 0053.scaffold00196 744333 1 A . - ReadM SNP 0053.scaffold00196 744718 1 A G - ScafM SNP 0053.scaffold00196 745143 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 745149 1 A T scaffold9356 ScafM SNP 0053.scaffold00196 745155 2 CA TC scaffold9356 ScafM INDEL 0053.scaffold00196 745176 3 ... ACA scaffold9356 ScafM SNP 0053.scaffold00196 745222 1 C A scaffold9356 Both SNP 0053.scaffold00196 745519 1 T A scaffold9356 Both SNP 0053.scaffold00196 745548 1 T A scaffold9356 Both SNP 0053.scaffold00196 745573 1 G A scaffold9356 Both SNP 0053.scaffold00196 745904 1 G C scaffold9356 Both SNP 0053.scaffold00196 745981 1 T A scaffold9356 Both SNP 0053.scaffold00196 746078 1 G T scaffold9356 Both SNP 0053.scaffold00196 746602 1 G A scaffold9356 Both SNP 0053.scaffold00196 746645 1 C A scaffold9356 Both SNP 0053.scaffold00196 747262 1 C G scaffold9356 Both INDEL 0053.scaffold00196 747297 1 . A scaffold9356 Both SNP 0053.scaffold00196 747343 1 G C scaffold9356 Both SNP 0053.scaffold00196 747367 1 T C scaffold9356 Both SNP 0053.scaffold00196 747375 1 C A scaffold9356 Both SNP 0053.scaffold00196 747437 1 A T scaffold9356 Both SNP 0053.scaffold00196 747439 1 G T scaffold9356 Both SNP 0053.scaffold00196 747498 1 A G scaffold9356 Both SNP 0053.scaffold00196 747628 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 747648 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 747653 2 AT TA scaffold9356 ScafM SNP 0053.scaffold00196 747770 1 A G scaffold9356 Both INDEL 0053.scaffold00196 747771 1 . A scaffold9356 Both SNP 0053.scaffold00196 747828 1 T G scaffold9356 Both SNP 0053.scaffold00196 747894 1 G C scaffold9356 Both SNP 0053.scaffold00196 747916 1 T C scaffold9356 Both SNP 0053.scaffold00196 747965 1 C T scaffold9356 Both SNP 0053.scaffold00196 748090 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 748160 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 748194 1 G A scaffold9356 ScafM INDEL 0053.scaffold00196 748199 2 TT .. scaffold9356 ScafM SNP 0053.scaffold00196 748210 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 748251 1 C A scaffold9356 ReadM SNP 0053.scaffold00196 748360 1 T G - Both SNP 0053.scaffold00196 748409 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 748607 1 C T - ReadM SNP 0053.scaffold00196 749111 1 G A - ReadM SNP 0053.scaffold00196 749113 1 G C - Both SNP 0053.scaffold00196 749156 1 C G scaffold9356 Both SNP 0053.scaffold00196 749173 1 C G scaffold9356 Both SNP 0053.scaffold00196 749217 1 C G scaffold9356 Both SNP 0053.scaffold00196 749222 1 C T scaffold9356 Both SNP 0053.scaffold00196 749323 1 C G scaffold9356 Both SNP 0053.scaffold00196 749368 1 G C scaffold9356 Both SNP 0053.scaffold00196 749398 1 A C scaffold9356 Both SNP 0053.scaffold00196 749421 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 749477 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 749480 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 749487 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 749497 1 C G scaffold9356 Both SNP 0053.scaffold00196 749528 1 G A scaffold9356 Both SNP 0053.scaffold00196 749557 1 A G scaffold9356 ReadM SNP 0053.scaffold00196 749658 1 G A - ReadM INDEL 0053.scaffold00196 749673 1 A . - ReadM SNP 0053.scaffold00196 749725 1 G A - ReadM SNP 0053.scaffold00196 749782 1 A G - ReadM SNP 0053.scaffold00196 749795 1 C A - ReadM SNP 0053.scaffold00196 749806 1 T C - ReadM SNP 0053.scaffold00196 749854 1 A G - ScafM SNP 0053.scaffold00196 749886 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 749903 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 749905 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 749944 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 749984 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 749995 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 749997 1 G C scaffold9356 ScafM SNP 0053.scaffold00196 750003 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 750005 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 750020 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 750259 1 A G - ReadM SNP 0053.scaffold00196 750313 1 C T - Both SNP 0053.scaffold00196 750454 1 T A scaffold9356 ScafM INDEL 0053.scaffold00196 750491 15 ............... CTCCTTCCCTTCCCT scaffold9356 ScafM SNP 0053.scaffold00196 750512 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 750521 1 G C scaffold9356 ScafM INDEL 0053.scaffold00196 750553 1 . A scaffold9356 ScafM SNP 0053.scaffold00196 750555 1 T A scaffold9356 ScafM SNP 0053.scaffold00196 750570 1 G C scaffold9356 ScafM SNP 0053.scaffold00196 750585 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 750602 1 T A scaffold9356 ScafM SNP 0053.scaffold00196 750605 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 750618 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 750627 2 CA GT scaffold9356 ScafM SNP 0053.scaffold00196 750641 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 750911 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 750922 2 AC CT scaffold9356 ScafM SNP 0053.scaffold00196 750925 1 A G scaffold9356 ScafM INDEL 0053.scaffold00196 750939 1 . T scaffold9356 Both SNP 0053.scaffold00196 751111 1 C G scaffold9356 Both SNP 0053.scaffold00196 751313 1 T G scaffold9356 ScafM INDEL 0053.scaffold00196 751427 5 TATGT ..... scaffold9356 ScafM SNP 0053.scaffold00196 751435 1 G C scaffold9356 ScafM SNP 0053.scaffold00196 751439 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 751451 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 751460 6 TTTTTT GGCAGA scaffold9356 ScafM SNP 0053.scaffold00196 751467 2 TT CA scaffold9356 ScafM INDEL 0053.scaffold00196 751471 5 TGACG ..... scaffold9356 ScafM INDEL 0053.scaffold00196 751478 1 A . scaffold9356 ScafM SNP 0053.scaffold00196 751512 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 752514 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 752558 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 752596 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 752631 2 GA CT scaffold9356 ScafM INDEL 0053.scaffold00196 752637 1 T . scaffold9356 ScafM INDEL 0053.scaffold00196 752647 7 ....... TCCTAAT scaffold9356 ScafM SNP 0053.scaffold00196 752690 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 752794 1 T G scaffold9356 ScafM INDEL 0053.scaffold00196 752839 1 . T scaffold9356 ScafM INDEL 0053.scaffold00196 752855 1 . T scaffold9356 Both SNP 0053.scaffold00196 752992 1 G A scaffold9356 Both SNP 0053.scaffold00196 752999 1 G T scaffold9356 Both SNP 0053.scaffold00196 753106 1 T C scaffold9356 Both SNP 0053.scaffold00196 753601 1 C A scaffold9356 Both SNP 0053.scaffold00196 753646 1 G A scaffold9356 Both SNP 0053.scaffold00196 753900 1 G C scaffold9356 ScafM INDEL 0053.scaffold00196 753956 3 TTT ... scaffold9356 Both INDEL 0053.scaffold00196 754778 1 T . scaffold9356 Both SNP 0053.scaffold00196 755002 1 T C scaffold9356 Both INDEL 0053.scaffold00196 755104 1 T . scaffold9356 Both SNP 0053.scaffold00196 755264 1 T C scaffold9356 Both INDEL 0053.scaffold00196 755363 1 . G scaffold9356 Both SNP 0053.scaffold00196 755393 1 T G scaffold9356 Both SNP 0053.scaffold00196 755521 1 G T scaffold9356 Both SNP 0053.scaffold00196 755744 1 G C scaffold9356 Both SNP 0053.scaffold00196 755749 1 G T scaffold9356 Both SNP 0053.scaffold00196 755761 1 T C scaffold9356 Both SNP 0053.scaffold00196 756077 1 T A scaffold9356 Both SNP 0053.scaffold00196 756662 1 T C scaffold9356 Both SNP 0053.scaffold00196 756667 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 756875 1 T A - Both SNP 0053.scaffold00196 757052 1 G A scaffold9356 Both SNP 0053.scaffold00196 757162 1 A G scaffold9356 Both SNP 0053.scaffold00196 757367 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 757476 1 C T - ReadM SNP 0053.scaffold00196 757501 1 C T - ReadM SNP 0053.scaffold00196 757511 1 T C - ReadM SNP 0053.scaffold00196 757534 1 C T - ReadM SNP 0053.scaffold00196 757601 1 G A - ReadM SNP 0053.scaffold00196 757635 1 G A - ReadM INDEL 0053.scaffold00196 757878 1 . T - Both SNP 0053.scaffold00196 757930 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 758248 1 C G - ReadM SNP 0053.scaffold00196 758326 1 C T - Both SNP 0053.scaffold00196 758426 1 T C scaffold9356 ScafM INDEL 0053.scaffold00196 759601 1 T . scaffold9356 ScafM INDEL 0053.scaffold00196 759673 1 . T scaffold9356 ScafM SNP 0053.scaffold00196 760235 1 G T scaffold9356 ScafM INDEL 0053.scaffold00196 760236 1 . C scaffold9356 ScafM SNP 0053.scaffold00196 760381 1 T A scaffold9356 ScafM SNP 0053.scaffold00196 760383 1 T A scaffold9356 ScafM INDEL 0053.scaffold00196 760386 2 AC .. scaffold9356 ScafM INDEL 0053.scaffold00196 760390 3 AGC ... scaffold9356 ScafM SNP 0053.scaffold00196 760394 1 G A scaffold9356 ScafM INDEL 0053.scaffold00196 760396 1 C . scaffold9356 ScafM INDEL 0053.scaffold00196 760399 5 TGTCC ....A scaffold9356 ScafM INDEL 0053.scaffold00196 760405 1 C . scaffold9356 ScafM SNP 0053.scaffold00196 760410 1 C A scaffold9356 ScafM INDEL 0053.scaffold00196 760416 1 C . scaffold9356 ScafM SNP 0053.scaffold00196 760418 1 C G scaffold9356 ScafM SNP 0053.scaffold00196 760422 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 760502 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 760591 1 T C scaffold9356 Both SNP 0053.scaffold00196 760630 1 G A scaffold9356 Both SNP 0053.scaffold00196 760633 1 T A scaffold9356 Both SNP 0053.scaffold00196 760731 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 760766 1 A G scaffold9356 Both SNP 0053.scaffold00196 761511 1 A C scaffold9356 Both SNP 0053.scaffold00196 761576 1 T A scaffold9356 Both SNP 0053.scaffold00196 762011 1 A T scaffold9356 Both SNP 0053.scaffold00196 762046 1 G A scaffold9356 Both SNP 0053.scaffold00196 762077 1 T A scaffold9356 ReadM SNP 0053.scaffold00196 762199 1 G T - Both SNP 0053.scaffold00196 762494 1 C T scaffold9356 Both SNP 0053.scaffold00196 762501 1 G A scaffold9356 Both SNP 0053.scaffold00196 762531 1 G A scaffold9356 Both SNP 0053.scaffold00196 762637 1 A T scaffold9356 Both SNP 0053.scaffold00196 762657 1 A G scaffold9356 Both SNP 0053.scaffold00196 762753 1 C A scaffold9356 Both SNP 0053.scaffold00196 762806 1 A T scaffold9356 Both SNP 0053.scaffold00196 762839 1 C T scaffold9356 Both SNP 0053.scaffold00196 763014 1 C T scaffold9356 Both SNP 0053.scaffold00196 763056 1 C G scaffold9356 ScafM SNP 0053.scaffold00196 764663 1 T A scaffold9356 Both SNP 0053.scaffold00196 764791 1 T G scaffold9356 Both SNP 0053.scaffold00196 764845 1 A G scaffold9356 Both SNP 0053.scaffold00196 765246 1 G A scaffold9356 Both SNP 0053.scaffold00196 765281 1 T C scaffold9356 Both SNP 0053.scaffold00196 765513 1 A T scaffold9356 Both SNP 0053.scaffold00196 765546 1 C T scaffold9356 Both SNP 0053.scaffold00196 765567 1 T C scaffold9356 Both SNP 0053.scaffold00196 765758 1 T G scaffold9356 Both SNP 0053.scaffold00196 765893 1 A C scaffold9356 Both INDEL 0053.scaffold00196 766108 1 . T scaffold9356 Both SNP 0053.scaffold00196 766284 1 G C scaffold9356 Both SNP 0053.scaffold00196 766345 1 C T scaffold9356 Both SNP 0053.scaffold00196 766784 1 G C scaffold9356 Both SNP 0053.scaffold00196 766926 1 G A scaffold9356 Both SNP 0053.scaffold00196 767030 1 T G scaffold9356 Both SNP 0053.scaffold00196 767061 1 C T scaffold9356 Both SNP 0053.scaffold00196 767098 1 T C scaffold9356 Both INDEL 0053.scaffold00196 767170 1 A . scaffold9356 ScafM INDEL 0053.scaffold00196 767389 1 T . scaffold9356 ScafM SNP 0053.scaffold00196 767391 1 C G scaffold9356 ScafM SNP 0053.scaffold00196 767393 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 767454 1 T C scaffold9356 ScafM INDEL 0053.scaffold00196 767460 2 TT .. scaffold9356 ScafM INDEL 0053.scaffold00196 767517 30 .............................. TTTTCATTTCAAACATTTCAATTGTAGCGT scaffold9356 ScafM SNP 0053.scaffold00196 767617 1 A T scaffold9356 Both SNP 0053.scaffold00196 767659 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 767703 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 767707 1 C T scaffold9356 ReadM SNP 0053.scaffold00196 768216 1 T C - Both INDEL 0053.scaffold00196 768276 1 . A scaffold9356 ReadM SNP 0053.scaffold00196 768367 1 A G - ReadM INDEL 0053.scaffold00196 768635 1 A . - ReadM SNP 0053.scaffold00196 768706 1 C A - ReadM SNP 0053.scaffold00196 768859 1 T C - ReadM SNP 0053.scaffold00196 768862 1 G A - ReadM SNP 0053.scaffold00196 768867 1 C T - Both SNP 0053.scaffold00196 768991 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 769039 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 769191 1 T A scaffold9356 Both SNP 0053.scaffold00196 769203 1 A C scaffold9356 Both SNP 0053.scaffold00196 769274 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 769378 1 A C scaffold9356 Both SNP 0053.scaffold00196 769435 1 C T scaffold9356 ScafM INDEL 0053.scaffold00196 769565 2 .G AT scaffold9356 ScafM SNP 0053.scaffold00196 769573 1 A T scaffold9356 ScafM SNP 0053.scaffold00196 769590 1 C T scaffold9356 Both SNP 0053.scaffold00196 769688 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 769752 1 A T - ReadM SNP 0053.scaffold00196 769962 1 C G - ReadM SNP 0053.scaffold00196 770006 1 G T - ReadM SNP 0053.scaffold00196 770060 1 A C - ReadM SNP 0053.scaffold00196 770162 1 C T - ReadM SNP 0053.scaffold00196 770252 1 T C - ReadM SNP 0053.scaffold00196 770270 1 G C - ReadM SNP 0053.scaffold00196 770354 1 C A - ReadM SNP 0053.scaffold00196 770471 1 T G - ReadM SNP 0053.scaffold00196 770493 1 A C - ReadM SNP 0053.scaffold00196 770755 1 C G - ReadM SNP 0053.scaffold00196 770800 1 G A - ReadM SNP 0053.scaffold00196 770877 1 C T - ReadM SNP 0053.scaffold00196 770898 1 T G - ReadM SNP 0053.scaffold00196 771018 1 C T - ReadM SNP 0053.scaffold00196 771313 1 A G - ReadM SNP 0053.scaffold00196 773481 1 T C - ReadM SNP 0053.scaffold00196 773615 1 T C - ReadM SNP 0053.scaffold00196 773797 1 T C - Both SNP 0053.scaffold00196 773947 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 774068 1 A G scaffold9356 ReadM SNP 0053.scaffold00196 774214 1 A T - ReadM SNP 0053.scaffold00196 774244 1 A G - ReadM SNP 0053.scaffold00196 774283 1 A G - ReadM SNP 0053.scaffold00196 774476 1 C T - ReadM SNP 0053.scaffold00196 774650 1 T C - ReadM SNP 0053.scaffold00196 774679 1 C T - ReadM SNP 0053.scaffold00196 774704 1 C T - ReadM SNP 0053.scaffold00196 774716 1 A G - Both SNP 0053.scaffold00196 775163 1 G A scaffold9356 Both SNP 0053.scaffold00196 775222 1 G A scaffold9356 Both SNP 0053.scaffold00196 775284 1 G A scaffold9356 Both SNP 0053.scaffold00196 775287 1 A G scaffold9356 Both SNP 0053.scaffold00196 775373 1 T C scaffold9356 Both SNP 0053.scaffold00196 775503 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 775579 1 C T - Both SNP 0053.scaffold00196 775779 1 A T scaffold9356 Both SNP 0053.scaffold00196 775816 1 C T scaffold9356 Both SNP 0053.scaffold00196 776035 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 776064 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 776089 1 T G scaffold9356 ReadM SNP 0053.scaffold00196 776160 1 T C - ReadM SNP 0053.scaffold00196 776171 1 G A - ScafM SNP 0053.scaffold00196 776251 1 T C scaffold9356 Both SNP 0053.scaffold00196 776287 1 T C scaffold9356 Both SNP 0053.scaffold00196 776295 1 G C scaffold9356 ScafM INDEL 0053.scaffold00196 776332 1 T . scaffold9356 ScafM INDEL 0053.scaffold00196 776337 2 .. TA scaffold9356 Both SNP 0053.scaffold00196 776578 1 T A scaffold9356 Both SNP 0053.scaffold00196 776607 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 776844 1 C T - ReadM INDEL 0053.scaffold00196 776859 1 . T - ReadM INDEL 0053.scaffold00196 777024 1 T . - ReadM SNP 0053.scaffold00196 777244 1 C A - Both INDEL 0053.scaffold00196 777280 1 G . scaffold9356 Both SNP 0053.scaffold00196 777285 1 G A scaffold9356 Both SNP 0053.scaffold00196 777376 1 C T scaffold9356 Both INDEL 0053.scaffold00196 777389 1 . A scaffold9356 ScafM SNP 0053.scaffold00196 777392 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 777448 1 T G - ReadM SNP 0053.scaffold00196 777469 1 C G - ReadM SNP 0053.scaffold00196 777497 1 C T - ScafM SNP 0053.scaffold00196 777717 1 G A scaffold9356 ScafM INDEL 0053.scaffold00196 777860 2 AT .. scaffold9356 ScafM SNP 0053.scaffold00196 777870 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 778513 1 A C scaffold11840 ScafM SNP 0053.scaffold00196 778543 1 A G scaffold11840 ScafM SNP 0053.scaffold00196 778555 1 T G scaffold11840 ScafM SNP 0053.scaffold00196 778606 1 C T scaffold11840 ScafM SNP 0053.scaffold00196 778660 1 G A scaffold11840 ReadM SNP 0053.scaffold00196 783926 1 G A - ReadM SNP 0053.scaffold00196 784375 1 T C - ScafM SNP 0053.scaffold00196 788057 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 788142 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 788170 1 G A scaffold9356 Both SNP 0053.scaffold00196 788309 1 G A scaffold9356 Both SNP 0053.scaffold00196 788666 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 788799 1 A G scaffold9356 ScafM SNP 0053.scaffold00196 788801 1 C G scaffold9356 ScafM SNP 0053.scaffold00196 789187 1 A G scaffold9356 ScafM INDEL 0053.scaffold00196 789231 1 . A scaffold9356 ScafM SNP 0053.scaffold00196 789292 1 G A scaffold9356 ScafM INDEL 0053.scaffold00196 789367 1 . A scaffold9356 ScafM SNP 0053.scaffold00196 789466 1 T A scaffold9356 ReadM INDEL 0053.scaffold00196 789564 1 . A - ReadM SNP 0053.scaffold00196 789973 1 G A - ReadM SNP 0053.scaffold00196 790343 1 T G - Both SNP 0053.scaffold00196 790401 1 C G scaffold9356 Both SNP 0053.scaffold00196 790516 1 A G scaffold9356 Both SNP 0053.scaffold00196 790598 1 A G scaffold9356 ReadM SNP 0053.scaffold00196 790666 1 G T - Both SNP 0053.scaffold00196 790803 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 790950 1 T A - ScafM SNP 0053.scaffold00196 795092 1 A T scaffold9356 ScafM SNP 0053.scaffold00196 795126 2 GC AG scaffold9356 ReadM SNP 0053.scaffold00196 795160 1 A G - ReadM SNP 0053.scaffold00196 795239 1 A T - ReadM SNP 0053.scaffold00196 795288 1 A G - ReadM SNP 0053.scaffold00196 795325 1 A G - ReadM SNP 0053.scaffold00196 795380 1 C T - ReadM SNP 0053.scaffold00196 795411 1 G T - Both SNP 0053.scaffold00196 795584 1 T G scaffold9356 Both SNP 0053.scaffold00196 795629 1 T A scaffold9356 Both SNP 0053.scaffold00196 795641 1 T C scaffold9356 Both SNP 0053.scaffold00196 795716 1 G T scaffold9356 Both SNP 0053.scaffold00196 795983 1 A T scaffold9356 Both SNP 0053.scaffold00196 795991 1 T A scaffold9356 ScafM SNP 0053.scaffold00196 796241 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 796310 1 T G scaffold9356 ScafM SNP 0053.scaffold00196 796363 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 796373 1 A C scaffold9356 ScafM SNP 0053.scaffold00196 796375 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 796384 1 C T scaffold9356 ScafM SNP 0053.scaffold00196 796735 1 G T scaffold621 ScafM SNP 0053.scaffold00196 796750 1 C G scaffold621 ScafM SNP 0053.scaffold00196 796782 1 A C scaffold621 ScafM SNP 0053.scaffold00196 796796 2 GT AC scaffold621 ScafM SNP 0053.scaffold00196 796805 1 A T scaffold621 ScafM SNP 0053.scaffold00196 796808 2 AA GG scaffold621 ScafM INDEL 0053.scaffold00196 796825 2 AT .. scaffold621 ScafM SNP 0053.scaffold00196 796834 2 GG TT scaffold621 ScafM SNP 0053.scaffold00196 796842 1 A T scaffold621 ScafM SNP 0053.scaffold00196 796869 1 T A scaffold621 ScafM SNP 0053.scaffold00196 796887 2 GA AT scaffold621 ScafM SNP 0053.scaffold00196 796894 1 A G scaffold621 ScafM SNP 0053.scaffold00196 796908 1 C G scaffold621 ScafM SNP 0053.scaffold00196 796911 1 G C scaffold621 ScafM SNP 0053.scaffold00196 796921 1 G C scaffold621 ScafM SNP 0053.scaffold00196 796923 1 A T scaffold621 ScafM SNP 0053.scaffold00196 796932 1 A C scaffold621 ScafM SNP 0053.scaffold00196 796936 1 A C scaffold621 ScafM SNP 0053.scaffold00196 796955 1 T C scaffold621 ScafM INDEL 0053.scaffold00196 796994 1 A . scaffold621 ScafM SNP 0053.scaffold00196 797028 1 C A scaffold621 ScafM SNP 0053.scaffold00196 798855 1 C T scaffold19288 ScafM INDEL 0053.scaffold00196 798933 1 . T scaffold19288 ScafM SNP 0053.scaffold00196 799004 1 A G scaffold19288 ScafM SNP 0053.scaffold00196 799035 1 A G scaffold19288 ScafM INDEL 0053.scaffold00196 799091 1 T . scaffold19288 ScafM SNP 0053.scaffold00196 801191 1 A T scaffold9356 ScafM SNP 0053.scaffold00196 801200 1 C G scaffold9356 ScafM SNP 0053.scaffold00196 801306 1 G A scaffold9356 ScafM SNP 0053.scaffold00196 801324 1 G T scaffold9356 ReadM SNP 0053.scaffold00196 801428 1 G A - Both SNP 0053.scaffold00196 801557 1 A G scaffold9356 Both SNP 0053.scaffold00196 801790 1 G T scaffold9356 ReadM SNP 0053.scaffold00196 801868 1 A G - ReadM SNP 0053.scaffold00196 801901 1 T C - Both SNP 0053.scaffold00196 802107 1 G T scaffold9356 ScafM SNP 0053.scaffold00196 802204 1 C A scaffold9356 ScafM SNP 0053.scaffold00196 802231 1 T C scaffold9356 ScafM SNP 0053.scaffold00196 802257 1 T A scaffold9356 ScafM SNP 0053.scaffold00196 802292 1 T C scaffold9356 ReadM INDEL 0053.scaffold00196 802406 1 T . - ReadM SNP 0053.scaffold00196 802705 1 G C - Both SNP 0053.scaffold00196 802759 1 A G scaffold9356 Both SNP 0053.scaffold00196 802767 1 C T scaffold9356 Both SNP 0053.scaffold00196 802804 1 T A scaffold9356 Both SNP 0053.scaffold00196 802872 1 A G scaffold9356 ReadM SNP 0053.scaffold00196 802947 1 C A - ReadM SNP 0053.scaffold00196 802949 1 T A - Both INDEL 0053.scaffold00196 803061 1 . T scaffold9356 Both SNP 0053.scaffold00196 803069 1 C T scaffold9356 Both SNP 0053.scaffold00196 803203 1 T C scaffold9356 ReadM SNP 0053.scaffold00196 803501 1 C T - ReadM SNP 0053.scaffold00196 803636 1 G T - ReadM SNP 0053.scaffold00196 803704 1 G A - ReadM SNP 0053.scaffold00196 803763 1 A G - Both SNP 0053.scaffold00196 803914 1 C A scaffold9356 Both SNP 0053.scaffold00196 803978 1 G A scaffold9356 ReadM SNP 0053.scaffold00196 804125 1 T C - ReadM SNP 0053.scaffold00196 804141 1 C T - ReadM SNP 0053.scaffold00196 804169 1 G A - Both SNP 0053.scaffold00196 804207 1 G A scaffold9356 Both SNP 0053.scaffold00196 804252 1 T A scaffold9356 ReadM SNP 0053.scaffold00196 804303 1 G A - ReadM SNP 0053.scaffold00196 804366 1 C T - ReadM SNP 0053.scaffold00196 804436 1 G A - ReadM SNP 0053.scaffold00196 804531 1 T C - ReadM SNP 0053.scaffold00196 804613 1 T A - ReadM SNP 0053.scaffold00196 804835 1 A C - ReadM INDEL 0053.scaffold00196 804903 2 GA .. - ReadM SNP 0053.scaffold00196 805169 1 A T - ReadM SNP 0053.scaffold00196 805476 1 A G - ReadM SNP 0053.scaffold00196 805593 1 C T - ReadM SNP 0053.scaffold00196 805659 1 A G - ReadM SNP 0053.scaffold00196 805726 1 T C - ReadM SNP 0053.scaffold00196 805885 1 C A - ReadM SNP 0053.scaffold00196 806043 1 G A - ReadM SNP 0053.scaffold00196 806213 1 T C - ReadM SNP 0053.scaffold00196 806339 1 A T - ReadM SNP 0053.scaffold00196 806503 1 C T - ReadM SNP 0053.scaffold00196 806519 1 A C - ReadM SNP 0053.scaffold00196 806589 1 T G - ReadM SNP 0053.scaffold00196 806598 1 T C - ReadM SNP 0053.scaffold00196 806627 1 C T - ReadM SNP 0053.scaffold00196 806665 1 C T - ReadM SNP 0053.scaffold00196 806746 1 T C - ReadM SNP 0053.scaffold00196 806858 1 C A - ReadM SNP 0053.scaffold00196 806929 1 A G - ReadM SNP 0053.scaffold00196 806932 1 G C - ReadM SNP 0053.scaffold00196 806954 1 T C - ReadM SNP 0053.scaffold00196 806990 1 C A - Both SNP 0053.scaffold00196 807201 1 C T scaffold9356 ReadM INDEL 0053.scaffold00196 807270 1 T . - ReadM SNP 0053.scaffold00196 807520 1 A C - ReadM SNP 0053.scaffold00196 807544 1 G A - ReadM SNP 0053.scaffold00196 807593 1 C T - ReadM SNP 0053.scaffold00196 807612 1 C A - ReadM SNP 0053.scaffold00196 807625 1 A G - ReadM SNP 0053.scaffold00196 807862 1 A G - ReadM SNP 0053.scaffold00196 807932 1 A G - ReadM SNP 0053.scaffold00196 808114 1 T C - ReadM SNP 0053.scaffold00196 808160 1 C G - ReadM SNP 0053.scaffold00196 808261 1 T G - ReadM SNP 0053.scaffold00196 808270 1 T C - ReadM SNP 0053.scaffold00196 808286 1 A G - ScafM SNP 0053.scaffold00196 809503 1 A G scaffold11216 ScafM SNP 0053.scaffold00196 809505 1 G C scaffold11216 ReadM SNP 0053.scaffold00196 809590 1 G A - ReadM SNP 0053.scaffold00196 809753 1 C T - ReadM SNP 0053.scaffold00196 809810 1 T A - ReadM SNP 0053.scaffold00196 809875 1 G A - ReadM SNP 0053.scaffold00196 809945 1 T G - ReadM SNP 0053.scaffold00196 809960 1 C T - ReadM SNP 0053.scaffold00196 809979 1 G T - ReadM SNP 0053.scaffold00196 810281 1 T G - ReadM SNP 0053.scaffold00196 810366 1 A G - ReadM SNP 0053.scaffold00196 810445 1 G A - ReadM SNP 0053.scaffold00196 810513 1 C G - ReadM SNP 0053.scaffold00196 810517 1 G T - ReadM SNP 0053.scaffold00196 810619 1 G A - ReadM SNP 0053.scaffold00196 810817 1 G A - ReadM SNP 0053.scaffold00196 810844 1 G A - ReadM SNP 0053.scaffold00196 810937 1 G C - ReadM SNP 0053.scaffold00196 810952 1 C T - ReadM SNP 0053.scaffold00196 811215 1 T A - ReadM SNP 0053.scaffold00196 811260 1 G C - ReadM SNP 0053.scaffold00196 811411 1 A T - ReadM SNP 0053.scaffold00196 811416 1 A G - ReadM SNP 0053.scaffold00196 811442 1 A C - ReadM SNP 0053.scaffold00196 811455 1 C G - ReadM SNP 0053.scaffold00196 811827 1 G T - ReadM SNP 0053.scaffold00196 811886 1 C T - ReadM SNP 0053.scaffold00196 811948 1 G C - ReadM SNP 0053.scaffold00196 811988 1 G C - ReadM SNP 0053.scaffold00196 812152 1 A G - ReadM SNP 0053.scaffold00196 812201 1 A G - ReadM SNP 0053.scaffold00196 812243 1 G T - ReadM SNP 0053.scaffold00196 812297 1 A G - ReadM SNP 0053.scaffold00196 812301 1 G A - ReadM SNP 0053.scaffold00196 812343 1 G A - ReadM SNP 0053.scaffold00196 812353 1 A G - ReadM SNP 0053.scaffold00196 812358 1 G T - ReadM SNP 0053.scaffold00196 812432 1 G A - ReadM SNP 0053.scaffold00196 812468 1 T A - ReadM SNP 0053.scaffold00196 812478 1 A G - ReadM SNP 0053.scaffold00196 812576 1 G A - ReadM SNP 0053.scaffold00196 812584 1 A G - ReadM SNP 0053.scaffold00196 812705 1 T G - ReadM SNP 0053.scaffold00196 812810 2 TG CA - ReadM SNP 0053.scaffold00196 812927 1 A G - ReadM SNP 0053.scaffold00196 813002 1 A G - ReadM SNP 0053.scaffold00196 813040 1 G C - ReadM SNP 0053.scaffold00196 813195 1 C G - ReadM SNP 0053.scaffold00196 813198 1 A G - ReadM SNP 0053.scaffold00196 813219 1 G A - ReadM SNP 0053.scaffold00196 813266 1 T C - ReadM SNP 0053.scaffold00196 813288 1 T A - ReadM SNP 0053.scaffold00196 813662 1 A G - ReadM SNP 0053.scaffold00196 813720 1 A G - ReadM SNP 0053.scaffold00196 813819 1 G A - ReadM SNP 0053.scaffold00196 813976 1 C T - ReadM SNP 0053.scaffold00196 814076 1 G C - ReadM SNP 0053.scaffold00196 814206 1 G A - ReadM SNP 0053.scaffold00196 814215 1 G A - ReadM SNP 0053.scaffold00196 814312 1 G A - ReadM SNP 0053.scaffold00196 814324 1 T G - ReadM SNP 0053.scaffold00196 814343 1 T C - ReadM SNP 0053.scaffold00196 814431 1 A T - ReadM SNP 0053.scaffold00196 814441 1 T C - ReadM SNP 0053.scaffold00196 814469 1 C T - ReadM SNP 0053.scaffold00196 814526 1 G A - ReadM SNP 0053.scaffold00196 814546 1 G A - ReadM SNP 0053.scaffold00196 814715 1 A G - ReadM SNP 0053.scaffold00196 814740 1 G A - ReadM SNP 0053.scaffold00196 814771 1 C A - ReadM SNP 0053.scaffold00196 814832 1 G A - ReadM SNP 0053.scaffold00196 814984 1 C A - ReadM SNP 0053.scaffold00196 815046 1 T G - ReadM SNP 0053.scaffold00196 815049 1 G A - ReadM SNP 0053.scaffold00196 815128 1 T C - ReadM SNP 0053.scaffold00196 815132 1 A G - ReadM SNP 0053.scaffold00196 815158 1 T C - ReadM SNP 0053.scaffold00196 815190 1 C T - ReadM SNP 0053.scaffold00196 815282 1 G A - ReadM SNP 0053.scaffold00196 815451 1 T G - ReadM SNP 0053.scaffold00196 815512 1 C G - ReadM SNP 0053.scaffold00196 815595 1 C T - ReadM SNP 0053.scaffold00196 815662 1 A G - ReadM SNP 0053.scaffold00196 815731 1 G A - ReadM SNP 0053.scaffold00196 815944 1 A C - ReadM SNP 0053.scaffold00196 815973 1 G A - ReadM SNP 0053.scaffold00196 816001 1 G A - ReadM SNP 0053.scaffold00196 816108 1 T C - ReadM SNP 0053.scaffold00196 816186 1 T C - ReadM SNP 0053.scaffold00196 816226 1 G A - ReadM SNP 0053.scaffold00196 816296 1 G T - ReadM SNP 0053.scaffold00196 816326 1 G A - ReadM SNP 0053.scaffold00196 816427 1 C T - ReadM SNP 0053.scaffold00196 816433 1 G A - ReadM SNP 0053.scaffold00196 816547 1 T A - ReadM SNP 0053.scaffold00196 816593 1 A T - ReadM SNP 0053.scaffold00196 816693 1 C T - ReadM SNP 0053.scaffold00196 816704 1 T A - ReadM SNP 0053.scaffold00196 816741 1 A T - ReadM SNP 0053.scaffold00196 816842 1 T C - ReadM SNP 0053.scaffold00196 816889 1 T G - ReadM SNP 0053.scaffold00196 816893 1 G A - ReadM SNP 0053.scaffold00196 816970 1 A T - ReadM SNP 0053.scaffold00196 816989 1 A G - ReadM SNP 0053.scaffold00196 817122 1 C T - ReadM SNP 0053.scaffold00196 817178 1 A C - ReadM SNP 0053.scaffold00196 817201 1 C T - ReadM SNP 0053.scaffold00196 817211 1 A G - ReadM SNP 0053.scaffold00196 817240 1 T A - ReadM SNP 0053.scaffold00196 817322 1 C T - ReadM SNP 0053.scaffold00196 817364 1 A C - ReadM SNP 0053.scaffold00196 817368 1 A G - ReadM SNP 0053.scaffold00196 817423 1 C T - ReadM SNP 0053.scaffold00196 817522 1 T C - ReadM SNP 0053.scaffold00196 817540 1 C A - ReadM SNP 0053.scaffold00196 817591 1 A C - ReadM SNP 0053.scaffold00196 817620 1 C A - ReadM SNP 0053.scaffold00196 817622 1 G A - ReadM SNP 0053.scaffold00196 817673 1 A G - ReadM SNP 0053.scaffold00196 817695 1 C T - ReadM SNP 0053.scaffold00196 817730 1 A C - ReadM SNP 0053.scaffold00196 817784 1 A T - ReadM SNP 0053.scaffold00196 817818 1 C G - ReadM SNP 0053.scaffold00196 817834 1 C T - ReadM SNP 0053.scaffold00196 817895 1 A G - ReadM SNP 0053.scaffold00196 817905 1 T C - ReadM SNP 0053.scaffold00196 817966 1 T A - ReadM SNP 0053.scaffold00196 818048 1 G T - ReadM SNP 0053.scaffold00196 818095 1 G A - ReadM SNP 0053.scaffold00196 818160 1 A G - ReadM SNP 0053.scaffold00196 818285 1 C T - ReadM SNP 0053.scaffold00196 818297 1 C G - ReadM SNP 0053.scaffold00196 818431 1 T C - ReadM SNP 0053.scaffold00196 818458 1 G T - ReadM SNP 0053.scaffold00196 818608 1 G A - ReadM SNP 0053.scaffold00196 818696 1 A C - ReadM SNP 0053.scaffold00196 818711 1 A T - Both SNP 0053.scaffold00196 818740 1 C T scaffold11216 Both SNP 0053.scaffold00196 818787 1 C A scaffold11216 Both SNP 0053.scaffold00196 818862 1 G A scaffold11216 Both SNP 0053.scaffold00196 818900 1 A T scaffold11216 Both SNP 0053.scaffold00196 818921 1 G A scaffold11216 ScafM INDEL 0053.scaffold00196 818982 14 AAGTTCACCAGCTC .............. scaffold11216 ReadM SNP 0053.scaffold00196 819065 1 T A - ReadM SNP 0053.scaffold00196 819102 1 G C - ReadM SNP 0053.scaffold00196 819133 1 G C - ReadM SNP 0053.scaffold00196 819232 1 T C - ReadM SNP 0053.scaffold00196 819257 1 T C - ReadM SNP 0053.scaffold00196 819278 1 A C - ReadM SNP 0053.scaffold00196 819451 1 G C - Both SNP 0053.scaffold00196 819522 1 A C scaffold11216 Both SNP 0053.scaffold00196 819640 1 C T scaffold11216 Both SNP 0053.scaffold00196 819657 1 C T scaffold11216 Both SNP 0053.scaffold00196 819694 1 A C scaffold11216 Both SNP 0053.scaffold00196 819698 1 A G scaffold11216 Both SNP 0053.scaffold00196 819732 1 T G scaffold11216 Both SNP 0053.scaffold00196 819827 1 C G scaffold11216 ReadM SNP 0053.scaffold00196 819903 1 A G - ReadM SNP 0053.scaffold00196 819989 1 C G - ReadM SNP 0053.scaffold00196 820012 1 A T - ReadM SNP 0053.scaffold00196 820055 1 T C - ReadM SNP 0053.scaffold00196 820079 1 A G - ReadM SNP 0053.scaffold00196 820127 1 A C - ReadM SNP 0053.scaffold00196 820163 1 A G - ReadM SNP 0053.scaffold00196 820199 1 C T - ReadM SNP 0053.scaffold00196 820236 1 G C - ReadM SNP 0053.scaffold00196 820310 1 G A - ReadM SNP 0053.scaffold00196 820330 1 G A - Both SNP 0053.scaffold00196 820466 1 G T scaffold11216 Both SNP 0053.scaffold00196 820493 1 G T scaffold11216 Both SNP 0053.scaffold00196 820495 1 A C scaffold11216 Both SNP 0053.scaffold00196 820563 1 C T scaffold11216 Both SNP 0053.scaffold00196 820583 1 C A scaffold11216 Both SNP 0053.scaffold00196 820596 1 C T scaffold11216 Both SNP 0053.scaffold00196 820640 1 G A scaffold11216 Both SNP 0053.scaffold00196 820656 1 A G scaffold11216 ReadM SNP 0053.scaffold00196 820852 1 T C - ReadM SNP 0053.scaffold00196 822320 1 A C - ReadM SNP 0053.scaffold00196 822481 1 T G - ReadM SNP 0053.scaffold00196 822633 1 A C - ReadM SNP 0053.scaffold00196 822703 1 A G - ReadM SNP 0053.scaffold00196 822741 1 T C - ReadM SNP 0053.scaffold00196 822867 1 G A - ReadM SNP 0053.scaffold00196 822895 1 G A - ReadM INDEL 0053.scaffold00196 822957 1 C . - ReadM SNP 0053.scaffold00196 822996 1 A G - ReadM SNP 0053.scaffold00196 823055 1 T A - ReadM SNP 0053.scaffold00196 823164 1 G A - Both SNP 0053.scaffold00196 823363 1 T C scaffold11216 Both SNP 0053.scaffold00196 823407 1 T C scaffold11216 Both SNP 0053.scaffold00196 823487 1 C T scaffold11216 ReadM SNP 0053.scaffold00196 823603 1 G A - ReadM SNP 0053.scaffold00196 823634 1 C T - ReadM SNP 0053.scaffold00196 823641 1 A G - ReadM SNP 0053.scaffold00196 823776 1 C T - ReadM INDEL 0053.scaffold00196 823839 2 .. GC - ReadM SNP 0053.scaffold00196 823877 1 G A - ReadM SNP 0053.scaffold00196 823923 1 C T - ReadM SNP 0053.scaffold00196 823940 1 C T - ReadM SNP 0053.scaffold00196 824000 1 A C - ReadM SNP 0053.scaffold00196 824025 1 G C - ReadM SNP 0053.scaffold00196 824185 1 A G - ReadM SNP 0053.scaffold00196 824340 1 A G - ReadM SNP 0053.scaffold00196 824351 1 C T - ReadM SNP 0053.scaffold00196 824425 1 G A - ReadM SNP 0053.scaffold00196 824658 1 C T - ReadM SNP 0053.scaffold00196 824709 1 T A - ReadM SNP 0053.scaffold00196 824738 1 C G - ReadM SNP 0053.scaffold00196 824762 1 A G - ReadM SNP 0053.scaffold00196 824794 1 A G - ReadM SNP 0053.scaffold00196 824850 1 T C - ReadM SNP 0053.scaffold00196 824941 1 A G - ReadM SNP 0053.scaffold00196 824963 1 G A - ReadM SNP 0053.scaffold00196 825059 1 C T - ReadM SNP 0053.scaffold00196 825073 1 A T - ReadM SNP 0053.scaffold00196 825244 1 G A - ReadM SNP 0053.scaffold00196 825251 1 G A - ReadM SNP 0053.scaffold00196 825288 1 A G - ReadM SNP 0053.scaffold00196 825336 1 T C - ReadM SNP 0053.scaffold00196 825607 1 T C - ReadM SNP 0053.scaffold00196 826720 1 T G - ReadM SNP 0053.scaffold00196 827103 1 G A - ReadM SNP 0053.scaffold00196 828111 1 A C - ReadM SNP 0053.scaffold00196 828138 1 T C - ReadM SNP 0053.scaffold00196 829014 1 G T - ReadM SNP 0053.scaffold00196 829219 1 A T - ReadM SNP 0053.scaffold00196 829235 1 T G - ReadM SNP 0053.scaffold00196 829652 1 G A - ReadM SNP 0053.scaffold00196 829674 1 C G - ReadM SNP 0053.scaffold00196 829909 1 G A - ReadM SNP 0053.scaffold00196 829995 1 C T - ReadM SNP 0053.scaffold00196 830002 1 G A - ReadM SNP 0053.scaffold00196 830019 1 C A - ScafM INDEL 0053.scaffold00196 833798 1 A . scaffold11216 ScafM SNP 0053.scaffold00196 833823 1 A G scaffold11216 ScafM SNP 0053.scaffold00196 833828 1 T C scaffold11216 ReadM SNP 0053.scaffold00196 833943 1 A T - ReadM SNP 0053.scaffold00196 833978 1 G C - ReadM SNP 0053.scaffold00196 834064 1 G T - ReadM SNP 0053.scaffold00196 834132 1 G A - ReadM SNP 0053.scaffold00196 834300 1 C T - ReadM SNP 0053.scaffold00196 834308 1 T C - ReadM SNP 0053.scaffold00196 834591 1 C G - ReadM SNP 0053.scaffold00196 834641 1 C G - ReadM SNP 0053.scaffold00196 834770 1 T A - Both SNP 0053.scaffold00196 834813 1 T C scaffold11216 Both SNP 0053.scaffold00196 834976 1 C T scaffold11216 Both SNP 0053.scaffold00196 835009 1 G C scaffold11216 Both SNP 0053.scaffold00196 835026 1 C T scaffold11216 Both SNP 0053.scaffold00196 835064 1 G C scaffold11216 Both SNP 0053.scaffold00196 835110 1 G A scaffold11216 ScafM SNP 0053.scaffold00196 835325 1 A G scaffold11216 ReadM SNP 0053.scaffold00196 835432 1 A C - ReadM SNP 0054.scaffold00198 31466 1 G T - ReadM INDEL 0054.scaffold00198 42851 1 . A - ReadM INDEL 0054.scaffold00198 91150 1 T . - Both SNP 0054.scaffold00198 93935 1 T G scaffold492 ScafM INDEL 0054.scaffold00198 122691 1 A . scaffold492 ScafM INDEL 0054.scaffold00198 127515 2 .. GA scaffold7149 ReadM SNP 0054.scaffold00198 144113 1 T C - ScafM INDEL 0054.scaffold00198 188514 28 ............................ AAAAAACCTAAAAAAAAAAAAAAAAAAA scaffold3643 ScafM INDEL 0054.scaffold00198 190429 1 . A scaffold3643 ScafM INDEL 0054.scaffold00198 212704 1 T . scaffold3643 ScafM INDEL 0054.scaffold00198 212715 1 T . scaffold3643 ScafM INDEL 0054.scaffold00198 212723 1 . G scaffold3643 ScafM SNP 0054.scaffold00198 212725 1 G A scaffold3643 ScafM SNP 0054.scaffold00198 212747 1 A T scaffold3643 ScafM INDEL 0054.scaffold00198 212748 2 .. CA scaffold3643 ScafM INDEL 0054.scaffold00198 212749 1 . G scaffold3643 ScafM INDEL 0054.scaffold00198 212750 3 ... CCC scaffold3643 ScafM SNP 0054.scaffold00198 212757 1 A C scaffold3643 ScafM SNP 0054.scaffold00198 212759 2 AA TC scaffold3643 ScafM SNP 0054.scaffold00198 212762 1 A T scaffold3643 ScafM SNP 0054.scaffold00198 212768 1 A T scaffold3643 ScafM INDEL 0054.scaffold00198 212785 1 G . scaffold3643 ScafM SNP 0054.scaffold00198 215695 1 A C scaffold3643 ScafM SNP 0054.scaffold00198 221236 2 GT AG scaffold3643 ScafM SNP 0054.scaffold00198 221292 1 A C scaffold3643 ScafM SNP 0054.scaffold00198 222168 1 C T scaffold3643 ScafM SNP 0054.scaffold00198 222170 1 T C scaffold3643 ScafM INDEL 0054.scaffold00198 222202 2 TT .. scaffold3643 ScafM SNP 0054.scaffold00198 222220 1 T G scaffold3643 ScafM SNP 0054.scaffold00198 222287 1 G A scaffold3643 ScafM SNP 0054.scaffold00198 222311 1 A T scaffold3643 ScafM INDEL 0054.scaffold00198 222335 1 . A scaffold3643 ScafM SNP 0054.scaffold00198 222390 1 A G scaffold3643 ScafM SNP 0054.scaffold00198 260204 1 G A scaffold8777 ScafM SNP 0054.scaffold00198 260207 1 T G scaffold8777 ScafM INDEL 0054.scaffold00198 260240 2 AG .. scaffold8777 ScafM INDEL 0054.scaffold00198 260249 2 .. AA scaffold8777 ScafM SNP 0054.scaffold00198 279803 1 A G scaffold901 ScafM SNP 0054.scaffold00198 279810 1 G A scaffold901 ScafM SNP 0054.scaffold00198 279867 1 A G scaffold901 ScafM SNP 0054.scaffold00198 279869 1 A T scaffold901 ScafM SNP 0054.scaffold00198 279871 1 A T scaffold901 ScafM SNP 0054.scaffold00198 279903 1 A G scaffold901 ScafM SNP 0054.scaffold00198 279911 1 G A scaffold901 ScafM INDEL 0054.scaffold00198 279969 6 TTTCCC ...... scaffold901 ScafM SNP 0054.scaffold00198 280028 1 G T scaffold901 ScafM INDEL 0054.scaffold00198 280036 12 ............ CTTTAGCAATGA scaffold901 ScafM INDEL 0054.scaffold00198 280212 1 . C scaffold901 ScafM SNP 0054.scaffold00198 280226 1 C T scaffold901 ScafM SNP 0054.scaffold00198 280277 1 T C scaffold901 ScafM SNP 0054.scaffold00198 280279 1 A G scaffold901 ScafM SNP 0054.scaffold00198 280289 1 G T scaffold901 ScafM SNP 0054.scaffold00198 280298 1 A T scaffold901 ScafM SNP 0054.scaffold00198 280330 1 T G scaffold901 ScafM SNP 0054.scaffold00198 280350 1 T G scaffold901 ScafM SNP 0054.scaffold00198 280382 1 A C scaffold901 ScafM SNP 0054.scaffold00198 280417 1 G T scaffold901 ScafM SNP 0054.scaffold00198 280425 1 T C scaffold901 ScafM SNP 0054.scaffold00198 280427 1 A G scaffold901 ScafM SNP 0054.scaffold00198 280582 1 G C scaffold901 ScafM SNP 0054.scaffold00198 280763 1 C A scaffold901 ScafM SNP 0054.scaffold00198 280802 1 C T scaffold901 ScafM SNP 0054.scaffold00198 280807 1 T G scaffold901 ScafM SNP 0054.scaffold00198 280833 1 G T scaffold901 ScafM SNP 0054.scaffold00198 287443 1 C A scaffold6563 ScafM INDEL 0054.scaffold00198 287468 2 .. TC scaffold6563 ScafM SNP 0054.scaffold00198 287475 1 C T scaffold6563 ReadM INDEL 0054.scaffold00198 309524 1 T . - Both INDEL 0054.scaffold00198 309527 1 . C scaffold5524 ScafM INDEL 0054.scaffold00198 313276 1 T . scaffold5524 ScafM INDEL 0054.scaffold00198 313279 1 T . scaffold5524 ScafM INDEL 0054.scaffold00198 313284 1 A . scaffold5524 ScafM INDEL 0054.scaffold00198 313299 1 T . scaffold5524 ScafM INDEL 0054.scaffold00198 313306 1 C . scaffold5524 ScafM INDEL 0054.scaffold00198 313310 1 A . scaffold5524 ScafM INDEL 0054.scaffold00198 313312 1 G . scaffold5524 ScafM INDEL 0054.scaffold00198 313322 1 T . scaffold5524 ScafM INDEL 0054.scaffold00198 313325 1 G . scaffold5524 ScafM INDEL 0054.scaffold00198 313330 57 TACAAGTTAACTTTTCTTAAAGACTATCTGTCCCTATGGATTCATTTTTAGTGGAAA ......................................................... scaffold5524 ScafM INDEL 0054.scaffold00198 341422 1 . T scaffold5524 ScafM INDEL 0054.scaffold00198 361546 4 .... TTTT scaffold5524 ScafM SNP 0054.scaffold00198 366378 1 A G scaffold5524 ScafM INDEL 0054.scaffold00198 478838 1 . A scaffold10220 ScafM SNP 0054.scaffold00198 478859 1 A T scaffold10220 ScafM INDEL 0054.scaffold00198 478886 2 .. AT scaffold10220 ScafM SNP 0054.scaffold00198 479031 1 C T scaffold10220 ScafM SNP 0054.scaffold00198 498425 1 C T scaffold5343 ScafM SNP 0054.scaffold00198 498454 1 C T scaffold5343 ScafM SNP 0054.scaffold00198 498466 1 T C scaffold5343 ScafM INDEL 0054.scaffold00198 498587 1 T . scaffold5343 ScafM SNP 0054.scaffold00198 514590 1 T C scaffold20395 ScafM INDEL 0054.scaffold00198 514592 24 ........................ TTTTTTTTTTTTTTTTTTTTTTTT scaffold20395 ScafM INDEL 0054.scaffold00198 546625 19 ................... GGGGGGGGGGGGGGGGGGG scaffold6130 ScafM INDEL 0054.scaffold00198 551279 13 ............. GGGGGGGGGGGGG scaffold6130 ReadM SNP 0054.scaffold00198 582475 1 C T - ScafM SNP 0054.scaffold00198 586482 1 C T scaffold2904 ScafM INDEL 0054.scaffold00198 629130 59 GGGGGTTGGGGGGGGGGGTGGATTACAAAGAAATGAGTCCCAACAGCAAAAATAGAAAA ........................................................... scaffold2904 ScafM INDEL 0054.scaffold00198 630421 3 ... AGT scaffold22961 ScafM SNP 0054.scaffold00198 630443 1 A T scaffold22961 ScafM SNP 0054.scaffold00198 630470 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630472 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 630482 1 T A scaffold22961 ScafM SNP 0054.scaffold00198 630490 1 A T scaffold22961 ScafM SNP 0054.scaffold00198 630549 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630556 2 TG CA scaffold22961 ScafM INDEL 0054.scaffold00198 630566 1 A . scaffold22961 ScafM SNP 0054.scaffold00198 630572 1 A T scaffold22961 ScafM SNP 0054.scaffold00198 630578 1 A T scaffold22961 ScafM INDEL 0054.scaffold00198 630604 17 ................. CAAGATAATGTATGGCA scaffold22961 ScafM INDEL 0054.scaffold00198 630660 4 ACCT .... scaffold22961 ScafM SNP 0054.scaffold00198 630686 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630689 1 C G scaffold22961 ScafM SNP 0054.scaffold00198 630710 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 630716 1 G C scaffold22961 ScafM SNP 0054.scaffold00198 630718 1 C T scaffold22961 ScafM INDEL 0054.scaffold00198 630742 1 . T scaffold22961 ScafM SNP 0054.scaffold00198 630746 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 630754 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 630764 1 C A scaffold22961 ScafM SNP 0054.scaffold00198 630791 1 T G scaffold22961 ScafM INDEL 0054.scaffold00198 630793 4 .... AATG scaffold22961 ScafM INDEL 0054.scaffold00198 630798 1 . G scaffold22961 ScafM SNP 0054.scaffold00198 630823 1 A C scaffold22961 ScafM SNP 0054.scaffold00198 630839 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630855 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 630880 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630946 1 C T scaffold22961 ScafM SNP 0054.scaffold00198 630971 1 A G scaffold22961 ScafM SNP 0054.scaffold00198 631029 3 TTT ACG scaffold22961 ScafM SNP 0054.scaffold00198 631070 1 T A scaffold22961 ScafM SNP 0054.scaffold00198 631076 1 T G scaffold22961 ScafM SNP 0054.scaffold00198 631100 1 G A scaffold22961 ScafM SNP 0054.scaffold00198 631149 1 C A scaffold22961 ScafM SNP 0054.scaffold00198 631160 1 A G scaffold22961 ScafM INDEL 0054.scaffold00198 634770 1 C . scaffold2904 ScafM INDEL 0054.scaffold00198 634799 5 ..... GCCTG scaffold2904 ReadM SNP 0054.scaffold00198 636213 1 C T - ScafM SNP 0054.scaffold00198 653311 1 A T scaffold2904 ScafM INDEL 0054.scaffold00198 668665 1 A . scaffold2904 Both INDEL 0054.scaffold00198 671798 1 . T scaffold2904 ScafM INDEL 0054.scaffold00198 696662 1 . T scaffold2904 ScafM INDEL 0054.scaffold00198 708395 1 . A scaffold2904 ScafM SNP 0054.scaffold00198 720042 1 C T scaffold3819 ScafM SNP 0054.scaffold00198 720044 1 A G scaffold3819 ScafM SNP 0054.scaffold00198 720089 1 A C scaffold3819 ScafM SNP 0054.scaffold00198 720149 1 T G scaffold3819 ScafM SNP 0054.scaffold00198 720160 1 A G scaffold3819 ScafM SNP 0054.scaffold00198 720303 1 C T scaffold976 ScafM SNP 0054.scaffold00198 720334 1 A G scaffold976 ScafM SNP 0054.scaffold00198 720338 1 A G scaffold976 ScafM SNP 0054.scaffold00198 720350 1 C G scaffold976 ScafM SNP 0054.scaffold00198 720366 1 T C scaffold976 ScafM SNP 0054.scaffold00198 720373 1 C T scaffold976 ScafM SNP 0054.scaffold00198 720384 1 A T scaffold976 ScafM SNP 0054.scaffold00198 720415 1 G A scaffold976 ScafM INDEL 0054.scaffold00198 720416 2 .G AA scaffold976 ScafM SNP 0054.scaffold00198 720423 1 T C scaffold976 ScafM SNP 0054.scaffold00198 720436 1 T G scaffold976 ScafM SNP 0054.scaffold00198 720453 1 A G scaffold976 ScafM INDEL 0054.scaffold00198 720486 2 .. TT scaffold976 ScafM SNP 0054.scaffold00198 720508 1 T C scaffold976 ScafM SNP 0054.scaffold00198 720538 1 T G scaffold976 ScafM SNP 0054.scaffold00198 720551 1 C T scaffold976 ScafM SNP 0054.scaffold00198 720569 1 T A scaffold976 ScafM SNP 0054.scaffold00198 720572 1 G T scaffold976 ScafM SNP 0054.scaffold00198 720583 1 A C scaffold976 ScafM SNP 0054.scaffold00198 722404 1 G T scaffold2035 ScafM SNP 0054.scaffold00198 722406 1 G T scaffold2035 ScafM INDEL 0054.scaffold00198 725184 1 G . scaffold3267 ScafM SNP 0054.scaffold00198 725190 1 G T scaffold3267 ScafM SNP 0054.scaffold00198 725198 1 G A scaffold3267 ScafM SNP 0054.scaffold00198 725207 1 G T scaffold3267 ScafM SNP 0054.scaffold00198 725213 1 G T scaffold3267 ScafM SNP 0054.scaffold00198 725218 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725221 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725226 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725228 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725235 2 AT GA scaffold3267 ScafM SNP 0054.scaffold00198 725242 1 C T scaffold3267 ScafM SNP 0054.scaffold00198 725245 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725250 2 GC AA scaffold3267 ScafM SNP 0054.scaffold00198 725259 2 AC GG scaffold3267 ScafM SNP 0054.scaffold00198 725272 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725274 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725278 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725289 1 C G scaffold3267 ScafM SNP 0054.scaffold00198 725300 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725305 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725314 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725321 1 A C scaffold3267 ScafM SNP 0054.scaffold00198 725343 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725350 1 T G scaffold3267 ScafM SNP 0054.scaffold00198 725361 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725364 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725373 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725380 1 T C scaffold3267 ScafM SNP 0054.scaffold00198 725394 1 A G scaffold3267 ScafM SNP 0054.scaffold00198 725397 1 G T scaffold3267 ScafM INDEL 0054.scaffold00198 733875 1 . A scaffold2904 Both SNP 0054.scaffold00198 735533 1 G C scaffold2904 ScafM INDEL 0054.scaffold00198 743393 1 . T scaffold2904 ScafM SNP 0054.scaffold00198 743416 1 T A scaffold2904 ScafM SNP 0054.scaffold00198 743425 1 A G scaffold2904 ScafM SNP 0054.scaffold00198 743479 1 A T scaffold2904 ScafM SNP 0054.scaffold00198 745996 1 T A scaffold2904 ScafM SNP 0054.scaffold00198 771644 1 T C scaffold15655 ScafM SNP 0054.scaffold00198 771699 1 T C scaffold15655 ScafM SNP 0054.scaffold00198 771744 1 T A scaffold15655 ScafM INDEL 0055.scaffold00199 32780 1 C . scaffold3443 ScafM SNP 0055.scaffold00199 44882 2 AC GT scaffold10542 ScafM SNP 0055.scaffold00199 44896 1 C T scaffold10542 ScafM SNP 0055.scaffold00199 44911 1 A G scaffold10542 ScafM SNP 0055.scaffold00199 44942 1 A G scaffold10542 ScafM SNP 0055.scaffold00199 44946 1 G A scaffold10542 ScafM INDEL 0055.scaffold00199 45027 1 T . scaffold10542 ScafM SNP 0055.scaffold00199 45127 1 T G scaffold10542 ScafM SNP 0055.scaffold00199 45152 1 A T scaffold10542 ScafM SNP 0055.scaffold00199 45161 1 C A scaffold10542 ScafM SNP 0055.scaffold00199 45197 1 T C scaffold10542 ScafM SNP 0055.scaffold00199 45200 1 G T scaffold10542 ScafM SNP 0055.scaffold00199 45246 1 A T scaffold10542 ScafM SNP 0055.scaffold00199 45248 1 C G scaffold10542 ScafM SNP 0055.scaffold00199 45306 1 C T scaffold10542 ScafM SNP 0055.scaffold00199 48072 1 G T scaffold10282 ScafM SNP 0055.scaffold00199 48074 1 T G scaffold10282 ReadM SNP 0055.scaffold00199 49599 1 A C - ReadM INDEL 0055.scaffold00199 79310 1 A . - ReadM INDEL 0055.scaffold00199 79314 1 T . - ReadM INDEL 0055.scaffold00199 79893 1 . T - ScafM SNP 0055.scaffold00199 80352 1 C A scaffold5403 ScafM SNP 0055.scaffold00199 80364 1 C T scaffold5403 ScafM SNP 0055.scaffold00199 80385 1 T A scaffold5403 ReadM SNP 0055.scaffold00199 92466 1 T C - ReadM SNP 0055.scaffold00199 103685 1 T C - ScafM INDEL 0055.scaffold00199 155632 1 . T scaffold3764 ReadM SNP 0055.scaffold00199 178253 1 T C - ScafM SNP 0055.scaffold00199 188302 1 C G scaffold17963 ScafM SNP 0055.scaffold00199 189044 1 C T scaffold17963 Both SNP 0055.scaffold00199 189696 1 C T scaffold17963 ScafM INDEL 0055.scaffold00199 207695 1 T . scaffold11026 ScafM INDEL 0055.scaffold00199 207716 9 ......... GGAAGTAAG scaffold11026 ReadM SNP 0055.scaffold00199 213736 1 C T - ScafM INDEL 0055.scaffold00199 233098 1 A . scaffold7836 ScafM SNP 0055.scaffold00199 233209 1 G A scaffold3490 ScafM SNP 0055.scaffold00199 233252 1 T C scaffold3490 ScafM SNP 0055.scaffold00199 233452 1 C T scaffold4588 ScafM SNP 0055.scaffold00199 233454 1 A G scaffold4588 ScafM INDEL 0055.scaffold00199 233462 2 GC .. scaffold4588 ScafM SNP 0055.scaffold00199 233489 1 T G scaffold4588 ScafM SNP 0055.scaffold00199 233530 1 T C scaffold4588 ScafM SNP 0055.scaffold00199 233536 1 G A scaffold4588 ScafM SNP 0055.scaffold00199 233562 1 T C scaffold4588 ScafM INDEL 0055.scaffold00199 233571 1 C . scaffold4588 ScafM SNP 0055.scaffold00199 233573 1 G A scaffold4588 ScafM SNP 0055.scaffold00199 233618 1 A G scaffold4588 ScafM INDEL 0055.scaffold00199 233649 5 AAATC ..... scaffold4588 ScafM INDEL 0055.scaffold00199 233658 1 A . scaffold4588 ScafM INDEL 0055.scaffold00199 233660 3 CCA ... scaffold4588 ScafM INDEL 0055.scaffold00199 233665 7 GAAGAAA ......T scaffold4588 ScafM INDEL 0055.scaffold00199 233675 3 GAA ... scaffold4588 ScafM INDEL 0055.scaffold00199 233679 1 G . scaffold4588 ScafM SNP 0055.scaffold00199 233684 1 T C scaffold4588 ScafM SNP 0055.scaffold00199 233702 1 A G scaffold4588 ScafM SNP 0055.scaffold00199 233705 1 G A scaffold4588 ScafM SNP 0055.scaffold00199 233753 1 T C scaffold4588 ScafM SNP 0055.scaffold00199 233762 1 T A scaffold4588 ScafM SNP 0055.scaffold00199 233775 1 A G scaffold4588 ScafM SNP 0055.scaffold00199 233777 2 AA GG scaffold4588 ScafM SNP 0055.scaffold00199 233963 1 A G scaffold24060 ScafM SNP 0055.scaffold00199 233968 1 C T scaffold24060 ScafM SNP 0055.scaffold00199 233972 2 AA GG scaffold24060 ScafM SNP 0055.scaffold00199 233977 1 T A scaffold24060 ScafM SNP 0055.scaffold00199 234000 1 G A scaffold24060 ScafM INDEL 0055.scaffold00199 234026 1 C . scaffold24060 ScafM SNP 0055.scaffold00199 234031 1 T G scaffold24060 ReadM SNP 0055.scaffold00199 269157 1 T C - ReadM SNP 0055.scaffold00199 272295 1 G A - ScafM INDEL 0055.scaffold00199 310842 1 . A scaffold18787 ScafM INDEL 0055.scaffold00199 316398 1 C . scaffold18787 ScafM INDEL 0055.scaffold00199 344861 3 ... TTT scaffold18787 Both SNP 0055.scaffold00199 347283 1 T C scaffold18787 ScafM INDEL 0055.scaffold00199 350141 1 . A scaffold45489 ScafM INDEL 0055.scaffold00199 350227 1 T . scaffold45489 ReadM SNP 0055.scaffold00199 351722 1 A G - Both SNP 0055.scaffold00199 356491 1 C T scaffold18787 ReadM SNP 0055.scaffold00199 358774 1 G C - ReadM SNP 0055.scaffold00199 360459 1 A G - Both SNP 0055.scaffold00199 361371 1 A T scaffold18787 ScafM INDEL 0055.scaffold00199 368289 1 . T scaffold18787 ScafM INDEL 0055.scaffold00199 368781 2 AT .. scaffold18787 ScafM INDEL 0055.scaffold00199 369819 45 ............................................. CCGACTTTCCAGCTCAAAAAATGAAGGTATAGTTCCCCCCCCCCC scaffold18787 ScafM SNP 0055.scaffold00199 370176 1 G A scaffold18787 ScafM INDEL 0055.scaffold00199 370685 5 ..... CCCCC scaffold18787 Both SNP 0055.scaffold00199 373926 1 T G scaffold18787 ScafM INDEL 0055.scaffold00199 373975 10 .......... AAGATTAAAT scaffold18787 ScafM INDEL 0055.scaffold00199 374027 7 ....... AGACCAT scaffold18787 ScafM SNP 0055.scaffold00199 374033 1 C T scaffold18787 ScafM SNP 0055.scaffold00199 374054 1 A G scaffold18787 Both INDEL 0055.scaffold00199 375980 1 . G scaffold18787 ReadM SNP 0055.scaffold00199 385986 1 C A - Both SNP 0055.scaffold00199 393009 1 T C scaffold17810 ScafM INDEL 0055.scaffold00199 394092 1 . A scaffold17810 ScafM INDEL 0055.scaffold00199 394125 1 . A scaffold17810 ReadM SNP 0055.scaffold00199 394681 1 A G - ScafM SNP 0055.scaffold00199 394817 1 G A scaffold2330 ScafM SNP 0055.scaffold00199 394924 1 T A scaffold2330 ScafM SNP 0055.scaffold00199 394963 1 A G scaffold2330 ScafM SNP 0055.scaffold00199 394980 1 C G scaffold2330 ScafM SNP 0055.scaffold00199 395027 1 G T scaffold2330 ScafM INDEL 0055.scaffold00199 395059 18 .................. AGAAGATCTGAAAAATGT scaffold2330 ScafM INDEL 0055.scaffold00199 395094 2 GA .. scaffold2330 ScafM INDEL 0055.scaffold00199 403991 1 . T scaffold4855 ScafM INDEL 0055.scaffold00199 403998 2 .. AA scaffold4855 ScafM INDEL 0055.scaffold00199 404087 1 C . scaffold4855 ScafM SNP 0055.scaffold00199 404089 1 T C scaffold4855 ScafM SNP 0055.scaffold00199 404101 2 CT TC scaffold4855 ScafM INDEL 0055.scaffold00199 404169 1 T . scaffold4855 ScafM SNP 0055.scaffold00199 404364 1 T G scaffold4855 ScafM SNP 0055.scaffold00199 404386 1 G A scaffold4855 ScafM SNP 0055.scaffold00199 404394 1 A G scaffold4855 ScafM SNP 0055.scaffold00199 404398 1 A G scaffold4855 ScafM SNP 0055.scaffold00199 404419 1 C T scaffold4855 ScafM SNP 0055.scaffold00199 404437 1 C T scaffold4855 ScafM SNP 0055.scaffold00199 404489 1 G T scaffold4855 ScafM SNP 0055.scaffold00199 404514 1 C G scaffold4855 ScafM SNP 0055.scaffold00199 407907 1 A T scaffold4855 ScafM INDEL 0055.scaffold00199 413597 1 . A scaffold4855 ReadM SNP 0055.scaffold00199 414324 1 C T - ReadM SNP 0055.scaffold00199 417282 1 A T - ReadM INDEL 0055.scaffold00199 419257 1 T . - ReadM INDEL 0055.scaffold00199 429123 1 T . - ScafM SNP 0055.scaffold00199 432433 1 T G scaffold6256 ScafM SNP 0055.scaffold00199 432495 1 T C scaffold6256 ScafM SNP 0055.scaffold00199 432500 1 C A scaffold6256 ScafM SNP 0055.scaffold00199 432519 1 A T scaffold6256 ScafM SNP 0055.scaffold00199 432531 1 T C scaffold6256 ScafM SNP 0055.scaffold00199 432540 1 A T scaffold6256 ScafM SNP 0055.scaffold00199 432548 2 TT CC scaffold6256 ScafM SNP 0055.scaffold00199 432658 1 C T scaffold6256 ScafM SNP 0055.scaffold00199 432787 1 A C scaffold6256 ScafM SNP 0055.scaffold00199 432794 1 A T scaffold6256 ScafM SNP 0055.scaffold00199 432902 1 T C scaffold6256 ScafM SNP 0055.scaffold00199 432913 1 T C scaffold6256 ScafM SNP 0055.scaffold00199 440154 1 A G scaffold2093 ScafM SNP 0055.scaffold00199 440176 1 C G scaffold2093 ReadM SNP 0055.scaffold00199 441955 1 C T - ScafM INDEL 0055.scaffold00199 457243 3 TTT ... scaffold2093 ScafM INDEL 0055.scaffold00199 457290 3 ACT ... scaffold2093 ScafM SNP 0055.scaffold00199 457294 2 CG GT scaffold2093 ScafM SNP 0055.scaffold00199 457298 2 TC AA scaffold2093 ScafM SNP 0055.scaffold00199 457301 1 T A scaffold2093 ScafM INDEL 0055.scaffold00199 457303 4 GTGC .... scaffold2093 ScafM INDEL 0055.scaffold00199 457308 5 GGGGT ..... scaffold2093 ScafM INDEL 0055.scaffold00199 457316 2 GT .A scaffold2093 ScafM SNP 0055.scaffold00199 457321 1 G A scaffold2093 ScafM SNP 0055.scaffold00199 457323 1 G A scaffold2093 ReadM SNP 0055.scaffold00199 457777 1 A G - ScafM SNP 0055.scaffold00199 463967 1 A G scaffold2093 ScafM SNP 0055.scaffold00199 466712 1 T C scaffold2390 ScafM SNP 0055.scaffold00199 466720 1 C T scaffold2390 ScafM SNP 0055.scaffold00199 466746 1 T C scaffold2390 ScafM SNP 0055.scaffold00199 466776 1 C T scaffold2390 ScafM SNP 0055.scaffold00199 466838 1 A T scaffold2390 ScafM SNP 0055.scaffold00199 466840 2 AA TC scaffold2390 ScafM SNP 0055.scaffold00199 466860 1 C T scaffold2390 ScafM SNP 0055.scaffold00199 466867 1 A G scaffold2390 ScafM SNP 0055.scaffold00199 466874 1 T C scaffold2390 ScafM SNP 0055.scaffold00199 466877 1 C A scaffold2390 ScafM SNP 0055.scaffold00199 466883 1 G A scaffold2390 ScafM SNP 0055.scaffold00199 466890 1 A C scaffold2390 ScafM INDEL 0055.scaffold00199 466893 1 . G scaffold2390 ScafM SNP 0055.scaffold00199 466899 1 C T scaffold2390 ScafM SNP 0055.scaffold00199 466902 1 T C scaffold2390 ScafM SNP 0055.scaffold00199 466904 1 C A scaffold2390 ScafM SNP 0055.scaffold00199 466942 1 C A scaffold2390 ScafM SNP 0055.scaffold00199 467026 1 T C scaffold2390 ScafM SNP 0055.scaffold00199 467092 1 T G scaffold2390 ScafM SNP 0055.scaffold00199 467130 1 A G scaffold2390 ScafM SNP 0055.scaffold00199 467165 1 C T scaffold2390 ScafM SNP 0055.scaffold00199 467218 1 C A scaffold2390 ScafM SNP 0055.scaffold00199 467257 1 T A scaffold2390 ScafM SNP 0055.scaffold00199 467272 1 C A scaffold2390 ScafM SNP 0055.scaffold00199 469587 1 A G scaffold2235 ScafM INDEL 0055.scaffold00199 469592 1 . A scaffold2235 ReadM SNP 0055.scaffold00199 480220 1 G A - ReadM SNP 0055.scaffold00199 508311 1 A G - ScafM INDEL 0055.scaffold00199 511099 1 . A scaffold9132 ScafM INDEL 0055.scaffold00199 521726 37 ..................................... GACCGGCGTAACACAACCACTCTCGCCGAATTTCGCC scaffold20038 Both SNP 0055.scaffold00199 521828 1 A G scaffold20038 ReadM SNP 0055.scaffold00199 527108 1 A C - ReadM INDEL 0055.scaffold00199 529366 1 . A - ReadM SNP 0055.scaffold00199 532314 1 G A - ScafM SNP 0055.scaffold00199 539525 1 T G scaffold1835 ScafM INDEL 0055.scaffold00199 539526 7 ....... GGATTAT scaffold1835 ScafM INDEL 0055.scaffold00199 539527 1 . T scaffold1835 ScafM SNP 0055.scaffold00199 539599 1 A C scaffold1835 ScafM SNP 0055.scaffold00199 539602 1 T C scaffold1835 ScafM SNP 0055.scaffold00199 539607 1 G A scaffold1835 ScafM SNP 0055.scaffold00199 539660 1 T C scaffold1835 ScafM SNP 0055.scaffold00199 539748 1 C T scaffold1835 ReadM INDEL 0055.scaffold00199 539847 1 . T - ScafM INDEL 0055.scaffold00199 541894 1 . A scaffold1835 ReadM SNP 0055.scaffold00199 554382 1 T C - ScafM SNP 0055.scaffold00199 561647 1 G C scaffold8925 ScafM SNP 0055.scaffold00199 561708 1 T A scaffold8925 ScafM SNP 0055.scaffold00199 561950 1 T G scaffold8925 ScafM SNP 0055.scaffold00199 561970 1 G C scaffold8925 Both INDEL 0055.scaffold00199 562269 2 .. AA scaffold8925 ScafM SNP 0055.scaffold00199 562411 1 T C scaffold8925 ScafM SNP 0055.scaffold00199 562605 1 C G scaffold8925 ScafM SNP 0055.scaffold00199 565913 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 565935 1 C G scaffold1656 ScafM SNP 0055.scaffold00199 566064 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 566306 3 CTT AAA scaffold1656 ScafM SNP 0055.scaffold00199 566318 1 A G scaffold1656 ScafM SNP 0055.scaffold00199 566376 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 566380 1 T A scaffold1656 ScafM SNP 0055.scaffold00199 566382 1 A T scaffold1656 ScafM SNP 0055.scaffold00199 566392 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 566487 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 566501 1 A G scaffold1656 ScafM SNP 0055.scaffold00199 566514 1 G T scaffold1656 ScafM SNP 0055.scaffold00199 566577 1 G T scaffold1656 ScafM SNP 0055.scaffold00199 566582 1 G A scaffold1656 ScafM SNP 0055.scaffold00199 566730 2 TT AA scaffold1656 ScafM SNP 0055.scaffold00199 566737 1 G A scaffold1656 ScafM SNP 0055.scaffold00199 566760 1 A T scaffold1656 ScafM SNP 0055.scaffold00199 566815 1 T C scaffold1656 ReadM SNP 0055.scaffold00199 576881 1 C G - ReadM SNP 0055.scaffold00199 579171 1 C T - ReadM SNP 0055.scaffold00199 591441 1 A G - ScafM SNP 0055.scaffold00199 600725 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600743 1 G T scaffold2747 ScafM SNP 0055.scaffold00199 600746 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600758 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600760 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 600769 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600785 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 600800 2 AA CT scaffold2747 ScafM SNP 0055.scaffold00199 600812 1 A T scaffold2747 ScafM SNP 0055.scaffold00199 600814 1 T A scaffold2747 ScafM SNP 0055.scaffold00199 600817 1 A C scaffold2747 ScafM SNP 0055.scaffold00199 600823 2 AA GT scaffold2747 ScafM SNP 0055.scaffold00199 600831 1 A G scaffold2747 ScafM SNP 0055.scaffold00199 600850 1 C T scaffold2747 ScafM SNP 0055.scaffold00199 600854 2 AA CC scaffold2747 ScafM SNP 0055.scaffold00199 600863 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600870 1 A C scaffold2747 ScafM SNP 0055.scaffold00199 600873 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 600888 1 A T scaffold2747 ScafM SNP 0055.scaffold00199 600891 1 A C scaffold2747 ScafM SNP 0055.scaffold00199 600893 1 C T scaffold2747 ScafM SNP 0055.scaffold00199 600905 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 600908 1 C A scaffold2747 ScafM SNP 0055.scaffold00199 600913 1 A T scaffold2747 ScafM SNP 0055.scaffold00199 600928 1 C G scaffold2747 ScafM SNP 0055.scaffold00199 600942 1 T C scaffold2747 ScafM SNP 0055.scaffold00199 600960 2 TT AC scaffold2747 ScafM SNP 0055.scaffold00199 600964 1 C T scaffold2747 ScafM SNP 0055.scaffold00199 601065 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 601076 1 A C scaffold2747 ScafM SNP 0055.scaffold00199 601080 1 A G scaffold2747 ScafM SNP 0055.scaffold00199 601083 1 G A scaffold2747 ScafM SNP 0055.scaffold00199 601100 1 A G scaffold2747 ScafM SNP 0055.scaffold00199 601128 1 C T scaffold2747 ScafM SNP 0055.scaffold00199 601159 2 CC TT scaffold2747 ScafM SNP 0055.scaffold00199 601212 2 AT TA scaffold2747 ScafM SNP 0055.scaffold00199 601223 1 T G scaffold2747 ScafM SNP 0055.scaffold00199 601226 2 AT CC scaffold2747 ScafM INDEL 0055.scaffold00199 601256 1 C . scaffold1656 ScafM SNP 0055.scaffold00199 601282 1 C T scaffold1656 ScafM SNP 0055.scaffold00199 601292 1 T C scaffold1656 ScafM SNP 0055.scaffold00199 601348 1 A C scaffold1656 ScafM SNP 0055.scaffold00199 601535 1 T C scaffold1656 ScafM INDEL 0055.scaffold00199 611690 1 . A scaffold4402 Both SNP 0055.scaffold00199 615004 1 C T scaffold4402 ScafM INDEL 0055.scaffold00199 617606 1 . A scaffold4402 ReadM SNP 0055.scaffold00199 623603 1 C T - ScafM INDEL 0055.scaffold00199 624587 1 . C scaffold4402 ReadM SNP 0055.scaffold00199 627182 1 T C - ReadM INDEL 0055.scaffold00199 633220 1 T . - ScafM SNP 0055.scaffold00199 636064 1 T C scaffold35928 ScafM SNP 0055.scaffold00199 636083 1 C A scaffold35928 ScafM SNP 0055.scaffold00199 636129 1 T A scaffold35928 ScafM SNP 0055.scaffold00199 636136 1 A T scaffold35928 ScafM SNP 0055.scaffold00199 636150 1 C T scaffold35928 ScafM INDEL 0055.scaffold00199 636152 3 ... TGT scaffold35928 ScafM SNP 0055.scaffold00199 636190 1 A T scaffold35928 ScafM SNP 0055.scaffold00199 636197 1 G C scaffold35928 ScafM SNP 0055.scaffold00199 637124 1 T C scaffold29680 ScafM SNP 0055.scaffold00199 637131 1 T G scaffold29680 ScafM SNP 0055.scaffold00199 637454 1 T G scaffold29680 ScafM SNP 0055.scaffold00199 649252 1 C T scaffold11487 Both SNP 0055.scaffold00199 650165 1 C T scaffold11487 Both SNP 0055.scaffold00199 660813 1 A G scaffold11487 ReadM SNP 0055.scaffold00199 663873 1 A T - ScafM SNP 0055.scaffold00199 672471 1 A G scaffold8504 ScafM SNP 0055.scaffold00199 672479 1 G A scaffold8504 ScafM SNP 0055.scaffold00199 672484 1 C T scaffold8504 ScafM SNP 0055.scaffold00199 672496 1 C T scaffold8504 ScafM SNP 0055.scaffold00199 672556 1 G A scaffold8504 ScafM SNP 0055.scaffold00199 672583 1 A G scaffold8504 ScafM SNP 0055.scaffold00199 672620 1 A T scaffold8504 ScafM SNP 0055.scaffold00199 672680 1 C T scaffold8504 ScafM SNP 0055.scaffold00199 672701 1 A C scaffold8504 ScafM SNP 0055.scaffold00199 672706 1 T C scaffold8504 ScafM SNP 0055.scaffold00199 672715 2 AT GC scaffold8504 ScafM SNP 0055.scaffold00199 672764 1 G A scaffold8504 ScafM SNP 0055.scaffold00199 672770 1 C T scaffold8504 ScafM INDEL 0055.scaffold00199 672775 1 . T scaffold8504 ScafM SNP 0055.scaffold00199 672793 1 A T scaffold8504 ScafM INDEL 0055.scaffold00199 672840 18 CAATTTATAATTTTTTTG .................. scaffold8504 ScafM INDEL 0055.scaffold00199 672863 1 T . scaffold8504 ScafM INDEL 0055.scaffold00199 672868 1 C . scaffold8504 ScafM INDEL 0055.scaffold00199 672870 3 GAA ... scaffold8504 ScafM INDEL 0055.scaffold00199 672875 1 T . scaffold8504 ScafM SNP 0055.scaffold00199 672877 1 T A scaffold8504 ScafM SNP 0055.scaffold00199 672883 1 G T scaffold8504 ScafM SNP 0055.scaffold00199 672924 1 T C scaffold8504 ScafM SNP 0055.scaffold00199 672951 1 A G scaffold8504 ScafM SNP 0055.scaffold00199 672954 1 A G scaffold8504 ScafM SNP 0055.scaffold00199 672972 1 T C scaffold8504 ScafM INDEL 0055.scaffold00199 672979 1 T . scaffold8504 ScafM SNP 0055.scaffold00199 673004 1 G A scaffold8504 ScafM INDEL 0055.scaffold00199 673027 1 . T scaffold8504 ScafM INDEL 0055.scaffold00199 673028 1 . T scaffold8504 ScafM INDEL 0055.scaffold00199 673056 4 .... TGAT scaffold8504 ScafM SNP 0055.scaffold00199 673339 1 C T scaffold8504 ScafM SNP 0055.scaffold00199 673372 1 A G scaffold8504 ScafM INDEL 0055.scaffold00199 673412 1 C . scaffold8504 ScafM SNP 0055.scaffold00199 673442 1 T C scaffold8504 ScafM SNP 0055.scaffold00199 673485 1 C A scaffold8504 ScafM SNP 0055.scaffold00199 673488 1 G T scaffold8504 ScafM SNP 0055.scaffold00199 677527 1 T C scaffold7375 ScafM INDEL 0055.scaffold00199 677553 2 .. TA scaffold7375 ScafM SNP 0055.scaffold00199 677564 1 T C scaffold7375 ScafM SNP 0055.scaffold00199 677575 1 A G scaffold7375 ScafM SNP 0055.scaffold00199 677619 1 G A scaffold7375 ScafM INDEL 0055.scaffold00199 677644 3 ... ATT scaffold7375 ScafM SNP 0055.scaffold00199 677653 1 C T scaffold7375 ScafM SNP 0055.scaffold00199 677673 1 C T scaffold7375 ScafM SNP 0055.scaffold00199 677706 1 A T scaffold7375 ScafM SNP 0055.scaffold00199 678016 1 C A scaffold7375 ScafM INDEL 0055.scaffold00199 678111 1 . T scaffold7375 ScafM SNP 0055.scaffold00199 679053 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679059 1 G C scaffold2494 ScafM SNP 0055.scaffold00199 679077 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679081 1 G A scaffold2494 ScafM SNP 0055.scaffold00199 679088 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679163 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679167 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679258 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679265 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679274 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679276 1 T C scaffold2494 ScafM SNP 0055.scaffold00199 679302 1 A C scaffold2494 ScafM SNP 0055.scaffold00199 679343 1 G A scaffold2494 ScafM SNP 0055.scaffold00199 679380 1 G A scaffold2494 ScafM SNP 0055.scaffold00199 679386 1 A T scaffold2494 ScafM SNP 0055.scaffold00199 679389 1 C A scaffold2494 ScafM SNP 0055.scaffold00199 679400 1 A C scaffold2494 ScafM SNP 0055.scaffold00199 679420 1 G A scaffold2494 ScafM SNP 0055.scaffold00199 679442 1 A G scaffold2494 ScafM INDEL 0055.scaffold00199 679449 1 . A scaffold2494 ScafM SNP 0055.scaffold00199 679457 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679467 1 T A scaffold2494 ScafM SNP 0055.scaffold00199 679508 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679514 1 T A scaffold2494 ScafM INDEL 0055.scaffold00199 679595 1 . T scaffold2494 ScafM SNP 0055.scaffold00199 679597 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679621 1 C T scaffold2494 ScafM SNP 0055.scaffold00199 679629 1 A T scaffold2494 ScafM SNP 0055.scaffold00199 679638 1 A T scaffold2494 ScafM SNP 0055.scaffold00199 679651 1 T C scaffold2494 ScafM SNP 0055.scaffold00199 679654 1 T C scaffold2494 ScafM SNP 0055.scaffold00199 679660 1 T C scaffold2494 ScafM SNP 0055.scaffold00199 679740 1 T C scaffold2494 ScafM INDEL 0055.scaffold00199 679744 1 . G scaffold2494 ScafM SNP 0055.scaffold00199 679772 1 A T scaffold2494 ScafM SNP 0055.scaffold00199 679774 1 T A scaffold2494 ScafM SNP 0055.scaffold00199 679780 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679822 1 T C scaffold2494 ScafM SNP 0055.scaffold00199 679841 1 G A scaffold2494 ScafM SNP 0055.scaffold00199 679845 1 A G scaffold2494 ScafM SNP 0055.scaffold00199 679912 1 G T scaffold2494 ScafM INDEL 0055.scaffold00199 679913 2 .. TG scaffold2494 ScafM SNP 0055.scaffold00199 679922 1 A T scaffold2494 ScafM SNP 0055.scaffold00199 679929 1 C T scaffold2494 ScafM INDEL 0055.scaffold00199 679933 2 .C TT scaffold2494 ScafM SNP 0055.scaffold00199 679989 1 T G scaffold2494 ScafM SNP 0055.scaffold00199 679991 1 A G scaffold2494 ScafM INDEL 0055.scaffold00199 694635 19 ................... GGGGGGGGGGGGGGGGGGG scaffold20125 ReadM SNP 0055.scaffold00199 723638 1 A G - ScafM SNP 0055.scaffold00199 728156 1 C A scaffold3172 Both SNP 0055.scaffold00199 728165 1 G T scaffold3172 ScafM INDEL 0055.scaffold00199 743537 21 AATTTTTGTTCAGTTGGTTTC ..................... scaffold3172 Both SNP 0055.scaffold00199 745199 1 C A scaffold3172 ScafM INDEL 0055.scaffold00199 747023 84 .................................................................................... TATCCATCACTTGATACCCAATTTAACCAACTTATTTTGACCCCATCTATGTATTTCTAACTTTTATCATTTCAATGGAGTGGT scaffold3172 ScafM SNP 0055.scaffold00199 756748 1 C A scaffold3172 ScafM SNP 0055.scaffold00199 761849 1 C G scaffold3172 ScafM SNP 0055.scaffold00199 779238 1 C A scaffold3157 ScafM SNP 0055.scaffold00199 779243 1 A G scaffold3157 ScafM SNP 0055.scaffold00199 779325 1 T C scaffold3157 ScafM SNP 0055.scaffold00199 779559 1 A G scaffold3157 ScafM SNP 0055.scaffold00199 779567 1 G A scaffold3157 ScafM SNP 0055.scaffold00199 779600 1 G C scaffold3157 ScafM INDEL 0055.scaffold00199 779602 3 ... ATT scaffold3157 ScafM SNP 0055.scaffold00199 779653 1 C A scaffold3157 ScafM SNP 0055.scaffold00199 779694 1 T A scaffold3157 ScafM SNP 0055.scaffold00199 779725 1 C T scaffold3157 ScafM SNP 0055.scaffold00199 779772 1 A T scaffold3157 ScafM SNP 0055.scaffold00199 779803 1 C T scaffold3157 ScafM INDEL 0055.scaffold00199 779806 1 . A scaffold3157 ScafM SNP 0055.scaffold00199 779874 1 C T scaffold3157 ScafM SNP 0055.scaffold00199 779879 1 T A scaffold3157 ScafM SNP 0055.scaffold00199 779921 1 C T scaffold3157 ScafM SNP 0055.scaffold00199 779929 1 T C scaffold3157 ScafM SNP 0055.scaffold00199 790703 1 G T scaffold7572 ReadM SNP 0055.scaffold00199 791984 1 T C - ReadM INDEL 0055.scaffold00199 792688 2 AA .. - ScafM SNP 0055.scaffold00199 793013 1 A G scaffold34480 Both SNP 0055.scaffold00199 807495 1 A G scaffold26801 ScafM SNP 0056.scaffold00205 28707 1 A G scaffold2259 ScafM SNP 0056.scaffold00205 73247 1 A G scaffold4212 ScafM SNP 0056.scaffold00205 73249 1 A C scaffold4212 ScafM SNP 0056.scaffold00205 73290 1 A G scaffold4212 ScafM SNP 0056.scaffold00205 140085 1 A G scaffold112 ScafM INDEL 0056.scaffold00205 143113 1 . A scaffold9740 ScafM SNP 0056.scaffold00205 143169 1 T C scaffold9740 ScafM SNP 0056.scaffold00205 143221 1 T C scaffold9740 ScafM SNP 0056.scaffold00205 143232 1 G A scaffold9740 ScafM SNP 0056.scaffold00205 143239 1 T C scaffold9740 ScafM SNP 0056.scaffold00205 143292 1 C A scaffold9740 ScafM SNP 0056.scaffold00205 143301 1 A G scaffold9740 ScafM SNP 0056.scaffold00205 143342 1 T G scaffold9740 ScafM SNP 0056.scaffold00205 143407 1 G A scaffold9740 ScafM INDEL 0056.scaffold00205 143427 1 . T scaffold9740 ScafM SNP 0056.scaffold00205 143430 1 A C scaffold9740 ScafM SNP 0056.scaffold00205 143436 2 TT CC scaffold9740 ScafM SNP 0056.scaffold00205 143440 1 A T scaffold9740 ScafM SNP 0056.scaffold00205 143453 1 G A scaffold9740 ScafM SNP 0056.scaffold00205 143456 1 G A scaffold9740 ScafM SNP 0056.scaffold00205 143504 1 C T scaffold9740 ScafM INDEL 0056.scaffold00205 154105 1 . A scaffold112 ScafM SNP 0056.scaffold00205 164621 1 A G scaffold112 ScafM INDEL 0056.scaffold00205 165361 2 AG .. scaffold112 ScafM INDEL 0056.scaffold00205 178636 22 ...................... CTGCTGCATCGTCCCCCCCCCC scaffold112 ScafM INDEL 0056.scaffold00205 181799 1 T . scaffold112 ScafM SNP 0056.scaffold00205 184353 1 T A scaffold112 ScafM SNP 0056.scaffold00205 269733 1 G T scaffold1682 ScafM SNP 0056.scaffold00205 269810 1 A G scaffold1682 ScafM INDEL 0056.scaffold00205 321520 1 . T scaffold6175 ReadM SNP 0056.scaffold00205 337819 1 T C - ScafM INDEL 0056.scaffold00205 356292 1 T . scaffold38856 ScafM SNP 0056.scaffold00205 356297 1 A G scaffold38856 ScafM SNP 0056.scaffold00205 360340 1 T A scaffold21821 ScafM SNP 0056.scaffold00205 360343 1 G T scaffold21821 ScafM INDEL 0056.scaffold00205 360346 2 .. TC scaffold21821 ScafM SNP 0056.scaffold00205 360354 1 G A scaffold21821 ScafM SNP 0056.scaffold00205 360356 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360373 2 AT TC scaffold21821 ScafM SNP 0056.scaffold00205 360377 1 T C scaffold21821 ScafM SNP 0056.scaffold00205 360387 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360414 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360429 1 A C scaffold21821 ScafM SNP 0056.scaffold00205 360433 1 C T scaffold21821 ScafM INDEL 0056.scaffold00205 360440 7 ....... CTCCCTC scaffold21821 ScafM INDEL 0056.scaffold00205 360441 5 ..... CTCTC scaffold21821 ScafM INDEL 0056.scaffold00205 360442 2 .. CC scaffold21821 ScafM SNP 0056.scaffold00205 360443 1 A G scaffold21821 ScafM SNP 0056.scaffold00205 360445 1 T C scaffold21821 ScafM INDEL 0056.scaffold00205 360447 5 ..... CTTTC scaffold21821 ScafM SNP 0056.scaffold00205 360454 3 TTG CCA scaffold21821 ScafM SNP 0056.scaffold00205 360459 1 A G scaffold21821 ScafM SNP 0056.scaffold00205 360466 1 A G scaffold21821 ScafM SNP 0056.scaffold00205 360473 2 TG CA scaffold21821 ScafM SNP 0056.scaffold00205 360477 1 G A scaffold21821 ScafM SNP 0056.scaffold00205 360479 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360483 3 CAG TGA scaffold21821 ScafM INDEL 0056.scaffold00205 360504 1 A . scaffold21821 ScafM SNP 0056.scaffold00205 360520 2 AT TC scaffold21821 ScafM SNP 0056.scaffold00205 360527 1 G A scaffold21821 ScafM SNP 0056.scaffold00205 360552 1 C T scaffold21821 ScafM SNP 0056.scaffold00205 360560 1 T C scaffold21821 ScafM INDEL 0056.scaffold00205 360569 1 T . scaffold21821 ScafM SNP 0056.scaffold00205 360578 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360580 2 AC GT scaffold21821 ScafM SNP 0056.scaffold00205 360598 1 G A scaffold21821 ScafM SNP 0056.scaffold00205 360601 1 A G scaffold21821 ScafM INDEL 0056.scaffold00205 360607 2 AA .. scaffold21821 ScafM INDEL 0056.scaffold00205 360611 16 CGTTGCACCGGTTCCC ................ scaffold21821 ScafM INDEL 0056.scaffold00205 360628 1 C . scaffold21821 ScafM SNP 0056.scaffold00205 360642 1 G T scaffold21821 ScafM SNP 0056.scaffold00205 360667 2 CT TC scaffold21821 ScafM SNP 0056.scaffold00205 360671 1 T A scaffold21821 ScafM SNP 0056.scaffold00205 360690 2 AC GT scaffold21821 ScafM SNP 0056.scaffold00205 360694 1 C T scaffold21821 ScafM SNP 0056.scaffold00205 360705 2 GG AC scaffold21821 ScafM SNP 0056.scaffold00205 360709 1 C A scaffold21821 ScafM SNP 0056.scaffold00205 360730 1 T C scaffold21821 ScafM SNP 0056.scaffold00205 360746 1 G A scaffold21821 ScafM SNP 0056.scaffold00205 360749 1 A G scaffold21821 ScafM INDEL 0056.scaffold00205 360752 4 .... ACTC scaffold21821 ScafM SNP 0056.scaffold00205 366820 1 T A scaffold5777 ScafM SNP 0056.scaffold00205 367484 1 A C scaffold5777 ScafM SNP 0056.scaffold00205 390594 1 T C scaffold7526 ScafM SNP 0056.scaffold00205 390608 1 A T scaffold7526 ScafM SNP 0056.scaffold00205 390660 1 G A scaffold7526 ReadM INDEL 0056.scaffold00205 394508 2 AA .. - ScafM SNP 0056.scaffold00205 403539 1 C T scaffold7526 ScafM SNP 0056.scaffold00205 418506 1 G A scaffold9522 ScafM SNP 0056.scaffold00205 556316 1 C T scaffold10408 ScafM SNP 0056.scaffold00205 556321 1 T C scaffold10408 ScafM SNP 0056.scaffold00205 556522 1 C T scaffold10408 ScafM SNP 0056.scaffold00205 556773 1 G T scaffold10408 ScafM INDEL 0056.scaffold00205 556796 8 ........ TTGAACGG scaffold10408 ScafM SNP 0056.scaffold00205 556879 1 T C scaffold10408 ScafM INDEL 0056.scaffold00205 556947 1 . A scaffold10408 ScafM SNP 0056.scaffold00205 557055 1 A G scaffold10408 ScafM SNP 0056.scaffold00205 557160 1 A T scaffold10408 ScafM INDEL 0056.scaffold00205 557194 6 ...... TAACGT scaffold10408 ScafM SNP 0056.scaffold00205 557233 2 GG CC scaffold10408 ScafM SNP 0056.scaffold00205 557267 1 T C scaffold10408 ScafM SNP 0056.scaffold00205 557569 1 G T scaffold3104 ScafM SNP 0056.scaffold00205 557600 1 G A scaffold3104 ScafM INDEL 0056.scaffold00205 557612 1 . G scaffold3104 ScafM SNP 0056.scaffold00205 557666 1 A G scaffold3104 ScafM SNP 0056.scaffold00205 557673 1 C T scaffold3104 ScafM SNP 0056.scaffold00205 557717 1 T G scaffold3104 ScafM INDEL 0056.scaffold00205 566422 1 . A scaffold654 ScafM SNP 0056.scaffold00205 566452 1 C T scaffold654 ScafM SNP 0056.scaffold00205 566466 1 G T scaffold654 ScafM SNP 0056.scaffold00205 566500 1 T C scaffold654 ScafM SNP 0056.scaffold00205 566502 1 A G scaffold654 ScafM SNP 0056.scaffold00205 566509 1 T G scaffold654 ScafM INDEL 0056.scaffold00205 566513 2 .. TA scaffold654 ScafM INDEL 0056.scaffold00205 566535 1 A . scaffold654 ScafM SNP 0056.scaffold00205 566539 1 A T scaffold654 ScafM SNP 0056.scaffold00205 566555 3 TCT AGC scaffold654 ScafM SNP 0056.scaffold00205 566591 2 AT GC scaffold654 ScafM SNP 0056.scaffold00205 566600 1 T A scaffold654 ScafM SNP 0056.scaffold00205 566604 1 A G scaffold654 ScafM SNP 0056.scaffold00205 566643 1 C A scaffold654 ScafM SNP 0056.scaffold00205 566657 1 C A scaffold654 ScafM SNP 0056.scaffold00205 566659 1 A T scaffold654 ScafM SNP 0056.scaffold00205 566667 2 CC AA scaffold654 ScafM SNP 0056.scaffold00205 566670 1 A T scaffold654 ScafM SNP 0056.scaffold00205 566674 1 A T scaffold654 ScafM SNP 0056.scaffold00205 566676 1 C T scaffold654 ScafM SNP 0056.scaffold00205 566682 1 T C scaffold654 ScafM SNP 0056.scaffold00205 566691 1 G T scaffold654 ScafM SNP 0056.scaffold00205 566701 1 G A scaffold654 ScafM SNP 0056.scaffold00205 566724 1 A C scaffold654 ScafM SNP 0056.scaffold00205 566731 1 G A scaffold654 ScafM SNP 0056.scaffold00205 566757 1 C T scaffold654 ScafM SNP 0056.scaffold00205 566761 1 C T scaffold654 ScafM SNP 0056.scaffold00205 566769 1 A G scaffold654 ScafM INDEL 0056.scaffold00205 566771 1 . C scaffold654 ScafM SNP 0056.scaffold00205 566774 1 C G scaffold654 ScafM INDEL 0056.scaffold00205 566776 1 A . scaffold654 ReadM SNP 0056.scaffold00205 569758 1 C A - ScafM INDEL 0056.scaffold00205 573803 2 GA .C scaffold4763 ScafM SNP 0056.scaffold00205 573818 1 A G scaffold4763 ScafM INDEL 0056.scaffold00205 573866 1 T . scaffold4763 ScafM SNP 0056.scaffold00205 573868 1 T C scaffold4763 ScafM SNP 0056.scaffold00205 573893 1 T C scaffold4763 ScafM SNP 0056.scaffold00205 573909 1 C A scaffold4763 ScafM SNP 0056.scaffold00205 573928 1 C G scaffold4763 ScafM SNP 0056.scaffold00205 573998 1 G A scaffold4763 ScafM SNP 0056.scaffold00205 574015 1 C A scaffold4763 ScafM SNP 0056.scaffold00205 574031 1 T A scaffold4763 ScafM SNP 0056.scaffold00205 616441 1 A C scaffold9760 ScafM SNP 0056.scaffold00205 616443 1 T A scaffold9760 ScafM SNP 0056.scaffold00205 616511 1 C T scaffold9760 Both SNP 0056.scaffold00205 617223 1 C T scaffold9760 Both SNP 0056.scaffold00205 617232 1 A G scaffold9760 ScafM SNP 0056.scaffold00205 651833 1 C T scaffold16929 ScafM SNP 0056.scaffold00205 651855 1 C T scaffold16929 ScafM SNP 0056.scaffold00205 651862 1 C T scaffold16929 ScafM SNP 0056.scaffold00205 652188 1 A G scaffold16929 ScafM INDEL 0056.scaffold00205 660253 27 ........................... GGGTTTAGTTTAGTTTATAATTCTCAT scaffold17689 ScafM INDEL 0056.scaffold00205 669318 80 ................................................................................ TGTTCGTAAGTGCTATTTTAATAAAGCAGCTAGCTACTCTTTATTAAAGTGTTCTTATCTCTTTAAGTGGAGTATAAGCC scaffold26813 ScafM SNP 0056.scaffold00205 675591 1 A G scaffold12808 ScafM SNP 0056.scaffold00205 706588 1 G A scaffold12808 ScafM SNP 0056.scaffold00205 706595 1 T C scaffold12808 ScafM SNP 0056.scaffold00205 706610 1 A G scaffold12808 ScafM SNP 0056.scaffold00205 706632 1 C G scaffold12808 ScafM SNP 0056.scaffold00205 706687 1 C T scaffold12808 ScafM SNP 0056.scaffold00205 706759 1 T C scaffold12808 ScafM SNP 0056.scaffold00205 706784 1 A G scaffold12808 ScafM SNP 0056.scaffold00205 706790 1 T G scaffold12808 ScafM SNP 0056.scaffold00205 720556 1 G A scaffold7842 ScafM SNP 0056.scaffold00205 728529 1 T G scaffold7842 ScafM INDEL 0057.scaffold00207 3032 2 .. AG scaffold4924 ScafM INDEL 0057.scaffold00207 3034 1 . C scaffold4924 ReadM INDEL 0057.scaffold00207 6504 1 T . - ScafM INDEL 0057.scaffold00207 94209 2 .. TA scaffold6579 ScafM SNP 0057.scaffold00207 114647 1 G T scaffold16826 ScafM SNP 0057.scaffold00207 114649 1 C T scaffold16826 ScafM SNP 0057.scaffold00207 114653 2 TG CA scaffold16826 ScafM SNP 0057.scaffold00207 114670 1 A T scaffold16826 ScafM SNP 0057.scaffold00207 114673 1 A C scaffold16826 ScafM SNP 0057.scaffold00207 114676 1 T G scaffold16826 ScafM SNP 0057.scaffold00207 114690 1 A T scaffold16826 ScafM SNP 0057.scaffold00207 114694 1 C G scaffold16826 ScafM SNP 0057.scaffold00207 114700 1 G C scaffold16826 ScafM SNP 0057.scaffold00207 114702 1 A T scaffold16826 ScafM SNP 0057.scaffold00207 114818 1 G A scaffold3954 ScafM SNP 0057.scaffold00207 114821 1 T C scaffold3954 ScafM INDEL 0057.scaffold00207 131762 11 ........... ATCATCCAAAA scaffold6579 ReadM SNP 0057.scaffold00207 138789 1 T C - ScafM SNP 0057.scaffold00207 139825 1 G A scaffold6579 ScafM SNP 0057.scaffold00207 159588 1 A T scaffold6579 ScafM SNP 0057.scaffold00207 159705 1 G A scaffold6579 ReadM SNP 0057.scaffold00207 169088 1 C T - ScafM SNP 0057.scaffold00207 175389 1 G T scaffold6579 ScafM SNP 0057.scaffold00207 176097 2 CT AA scaffold6579 ScafM SNP 0057.scaffold00207 176101 2 GG AA scaffold6579 ScafM SNP 0057.scaffold00207 176105 1 C A scaffold6579 ScafM SNP 0057.scaffold00207 176110 1 G A scaffold6579 ScafM SNP 0057.scaffold00207 176112 1 T G scaffold6579 ScafM INDEL 0057.scaffold00207 176114 2 .. GC scaffold6579 ScafM SNP 0057.scaffold00207 176116 1 G C scaffold6579 ReadM INDEL 0057.scaffold00207 178778 1 . G - ReadM SNP 0057.scaffold00207 189143 1 A C - ReadM SNP 0057.scaffold00207 194860 1 T C - ScafM SNP 0057.scaffold00207 198010 1 G A scaffold17989 ScafM SNP 0057.scaffold00207 201877 1 A T scaffold14757 ScafM SNP 0057.scaffold00207 201880 1 A C scaffold14757 ReadM SNP 0057.scaffold00207 204100 1 C T - ReadM SNP 0057.scaffold00207 206147 1 G A - ReadM SNP 0057.scaffold00207 210296 1 A G - ReadM SNP 0057.scaffold00207 211272 1 C T - ReadM SNP 0057.scaffold00207 211301 1 G T - ReadM SNP 0057.scaffold00207 213794 1 A T - ReadM SNP 0057.scaffold00207 213868 1 C T - ScafM SNP 0057.scaffold00207 220348 1 A C scaffold8670 ScafM SNP 0057.scaffold00207 220350 1 A C scaffold8670 ScafM SNP 0057.scaffold00207 220354 1 T C scaffold8670 ScafM SNP 0057.scaffold00207 220358 1 G C scaffold8670 ScafM SNP 0057.scaffold00207 220361 1 A C scaffold8670 ScafM SNP 0057.scaffold00207 230342 1 C T scaffold6753 ScafM INDEL 0057.scaffold00207 230791 1 A . scaffold6753 Both SNP 0057.scaffold00207 231218 1 A G scaffold6753 ReadM SNP 0057.scaffold00207 232563 1 G A - ScafM SNP 0057.scaffold00207 237463 1 C T scaffold6753 ReadM SNP 0057.scaffold00207 239238 1 G A - Both SNP 0057.scaffold00207 241521 1 C T scaffold6753 ScafM SNP 0057.scaffold00207 244368 1 G A scaffold6753 ScafM INDEL 0057.scaffold00207 244383 1 . T scaffold6753 Both SNP 0057.scaffold00207 244834 1 G A scaffold6753 Both SNP 0057.scaffold00207 245366 1 T A scaffold6753 ScafM INDEL 0057.scaffold00207 245483 4 AAAT .... scaffold6753 Both INDEL 0057.scaffold00207 246245 1 A . scaffold6753 ScafM INDEL 0057.scaffold00207 246769 3 ... TCT scaffold6753 Both SNP 0057.scaffold00207 247024 1 T C scaffold6753 ScafM SNP 0057.scaffold00207 247633 1 C G scaffold6753 ScafM SNP 0057.scaffold00207 247678 1 G A scaffold10623 ScafM SNP 0057.scaffold00207 247734 1 C T scaffold10623 ScafM SNP 0057.scaffold00207 247737 1 C A scaffold10623 ScafM INDEL 0057.scaffold00207 247740 2 CA .. scaffold10623 ScafM SNP 0057.scaffold00207 247744 1 T C scaffold10623 ScafM SNP 0057.scaffold00207 247748 2 GC AA scaffold10623 ScafM INDEL 0057.scaffold00207 247751 2 TA .. scaffold10623 ScafM INDEL 0057.scaffold00207 247755 1 G . scaffold10623 ScafM SNP 0057.scaffold00207 247759 3 GCA TAT scaffold10623 ScafM SNP 0057.scaffold00207 247778 1 G C scaffold10623 ReadM SNP 0057.scaffold00207 248072 1 A C - ScafM SNP 0057.scaffold00207 248265 1 G A scaffold6753 ScafM SNP 0057.scaffold00207 249066 1 C T scaffold6753 ScafM SNP 0057.scaffold00207 249075 1 T C scaffold6753 ScafM SNP 0057.scaffold00207 249081 1 A G scaffold6753 ScafM SNP 0057.scaffold00207 249094 1 A C scaffold6753 ReadM INDEL 0057.scaffold00207 251968 1 G . - ReadM SNP 0057.scaffold00207 252168 1 C A - ReadM SNP 0057.scaffold00207 257275 1 G A - ReadM INDEL 0057.scaffold00207 259870 1 . T - ReadM SNP 0057.scaffold00207 262043 1 T A - ReadM SNP 0057.scaffold00207 264489 1 T C - ScafM SNP 0057.scaffold00207 265118 1 T C scaffold7488 ScafM SNP 0057.scaffold00207 265139 1 C G scaffold7488 ScafM INDEL 0057.scaffold00207 265161 1 A . scaffold7488 ScafM SNP 0057.scaffold00207 265164 1 A C scaffold7488 ScafM SNP 0057.scaffold00207 265168 1 C A scaffold7488 ScafM SNP 0057.scaffold00207 265201 2 CC TA scaffold7488 ScafM INDEL 0057.scaffold00207 265675 1 . A scaffold6753 ScafM SNP 0057.scaffold00207 265720 1 G A scaffold6753 ScafM SNP 0057.scaffold00207 293526 1 C T scaffold25388 ReadM SNP 0057.scaffold00207 297695 1 A G - ReadM SNP 0057.scaffold00207 299734 1 G T - ReadM SNP 0057.scaffold00207 300770 1 G A - ReadM SNP 0057.scaffold00207 301562 1 C T - ReadM SNP 0057.scaffold00207 301622 1 G A - ReadM SNP 0057.scaffold00207 307802 1 A T - ReadM SNP 0057.scaffold00207 314823 1 C A - ReadM INDEL 0057.scaffold00207 319376 1 A . - ReadM SNP 0057.scaffold00207 320487 1 T C - ReadM INDEL 0057.scaffold00207 328482 1 G . - ReadM SNP 0057.scaffold00207 330022 1 A G - ReadM SNP 0057.scaffold00207 331824 1 T C - ReadM SNP 0057.scaffold00207 332945 1 G A - ReadM SNP 0057.scaffold00207 337007 1 T G - ReadM SNP 0057.scaffold00207 340833 1 T C - ReadM SNP 0057.scaffold00207 349461 1 G A - ReadM SNP 0057.scaffold00207 351071 1 C T - Both SNP 0057.scaffold00207 355238 1 C T scaffold5002 Both SNP 0057.scaffold00207 362524 1 T C scaffold5002 ReadM SNP 0057.scaffold00207 372882 1 G A - Both SNP 0057.scaffold00207 376287 1 C A scaffold5002 ScafM SNP 0057.scaffold00207 376465 1 A T scaffold5002 ScafM SNP 0057.scaffold00207 376467 1 G A scaffold5002 ReadM SNP 0057.scaffold00207 376622 1 T C - ReadM SNP 0057.scaffold00207 376628 1 C T - ReadM SNP 0057.scaffold00207 376697 1 T C - ScafM SNP 0057.scaffold00207 376769 1 T A scaffold5002 Both SNP 0057.scaffold00207 376846 1 C T scaffold5002 Both SNP 0057.scaffold00207 376871 1 G A scaffold5002 ScafM SNP 0057.scaffold00207 376926 1 A C scaffold5002 ScafM SNP 0057.scaffold00207 376935 1 C A scaffold5002 ScafM INDEL 0057.scaffold00207 376949 1 . A scaffold5002 ScafM SNP 0057.scaffold00207 377017 2 GG CA scaffold5002 ScafM SNP 0057.scaffold00207 377085 1 A G scaffold5002 ScafM SNP 0057.scaffold00207 377686 1 G A scaffold10866 ScafM SNP 0057.scaffold00207 377721 1 T C scaffold10866 ReadM SNP 0057.scaffold00207 378396 1 T C - ScafM INDEL 0057.scaffold00207 378761 2 TC .. scaffold14398 ScafM INDEL 0057.scaffold00207 378787 1 . A scaffold14398 ScafM INDEL 0057.scaffold00207 378793 3 .GG AAA scaffold14398 ScafM SNP 0057.scaffold00207 378803 1 T A scaffold14398 ScafM SNP 0057.scaffold00207 378832 1 T C scaffold14398 ScafM INDEL 0057.scaffold00207 378843 3 ... AAT scaffold14398 ScafM INDEL 0057.scaffold00207 378878 2 AG .. scaffold14398 ScafM INDEL 0057.scaffold00207 378925 3 AAA ... scaffold14398 ScafM SNP 0057.scaffold00207 378929 1 A G scaffold14398 ScafM SNP 0057.scaffold00207 378934 1 A T scaffold14398 ScafM SNP 0057.scaffold00207 378943 1 T C scaffold14398 ScafM SNP 0057.scaffold00207 378955 1 T C scaffold14398 ScafM INDEL 0057.scaffold00207 378959 2 GT .. scaffold14398 ScafM SNP 0057.scaffold00207 378962 2 CC AT scaffold14398 ScafM SNP 0057.scaffold00207 378965 2 AG TC scaffold14398 ScafM SNP 0057.scaffold00207 378969 1 C A scaffold14398 ScafM SNP 0057.scaffold00207 378977 3 AAA TTT scaffold14398 ScafM INDEL 0057.scaffold00207 379018 2 .. AA scaffold14398 ScafM SNP 0057.scaffold00207 379022 1 T G scaffold14398 ScafM SNP 0057.scaffold00207 379024 1 A T scaffold14398 ScafM SNP 0057.scaffold00207 379028 1 T C scaffold14398 ScafM INDEL 0057.scaffold00207 379055 2 .. GT scaffold14398 ScafM SNP 0057.scaffold00207 379059 1 T A scaffold14398 ScafM INDEL 0057.scaffold00207 379076 23 ....................... TGGTGCGTAGGCATCTTGGATAA scaffold14398 ScafM INDEL 0057.scaffold00207 379081 35 ................................... TATTCAAGAGCAGCCACAAAACAAAAGTAAGTATG scaffold14398 ScafM INDEL 0057.scaffold00207 379084 6 ...... TTAAAA scaffold14398 ScafM INDEL 0057.scaffold00207 379085 2 .. TT scaffold14398 ScafM SNP 0057.scaffold00207 379099 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379273 1 T C scaffold14398 ScafM SNP 0057.scaffold00207 379297 1 T A scaffold14398 ScafM SNP 0057.scaffold00207 379320 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379327 2 AA GT scaffold14398 ScafM SNP 0057.scaffold00207 379358 3 TTC CCG scaffold14398 ScafM SNP 0057.scaffold00207 379391 1 T A scaffold14398 ScafM INDEL 0057.scaffold00207 379401 4 GTGC .... scaffold14398 ScafM INDEL 0057.scaffold00207 379406 1 G . scaffold14398 ScafM INDEL 0057.scaffold00207 379495 3 ... CAA scaffold14398 ScafM SNP 0057.scaffold00207 379512 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379545 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379553 1 T G scaffold14398 ScafM SNP 0057.scaffold00207 379560 1 C A scaffold14398 ScafM SNP 0057.scaffold00207 379586 1 G T scaffold14398 ScafM SNP 0057.scaffold00207 379592 2 TT CC scaffold14398 ScafM INDEL 0057.scaffold00207 379615 4 .... AAAA scaffold14398 ScafM SNP 0057.scaffold00207 379638 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 379644 1 A T scaffold14398 ScafM INDEL 0057.scaffold00207 379646 6 ...... GCCAAT scaffold14398 ScafM INDEL 0057.scaffold00207 379647 1 . T scaffold14398 ScafM INDEL 0057.scaffold00207 379648 4 .... GTGT scaffold14398 ScafM INDEL 0057.scaffold00207 379650 2 .. AG scaffold14398 ScafM INDEL 0057.scaffold00207 379652 1 . A scaffold14398 Both SNP 0057.scaffold00207 379659 1 A T scaffold14398 ReadM SNP 0057.scaffold00207 379665 1 C G - ScafM SNP 0057.scaffold00207 379669 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379695 1 A G scaffold14398 ScafM SNP 0057.scaffold00207 379716 1 A G scaffold14398 ScafM SNP 0057.scaffold00207 379723 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379725 1 C A scaffold14398 ScafM SNP 0057.scaffold00207 379752 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 379773 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 379783 1 C T scaffold14398 Both SNP 0057.scaffold00207 379786 1 G T scaffold14398 ScafM SNP 0057.scaffold00207 379803 1 T A scaffold14398 Both SNP 0057.scaffold00207 379811 1 C T scaffold14398 Both SNP 0057.scaffold00207 379836 1 A G scaffold14398 ScafM SNP 0057.scaffold00207 379842 1 G A scaffold14398 ReadM SNP 0057.scaffold00207 379870 1 C G - ScafM SNP 0057.scaffold00207 379876 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 379901 1 C G scaffold14398 ScafM SNP 0057.scaffold00207 379906 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379909 1 T A scaffold14398 ScafM SNP 0057.scaffold00207 379912 1 T C scaffold14398 ScafM SNP 0057.scaffold00207 379917 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 379925 1 T G scaffold14398 ReadM SNP 0057.scaffold00207 379934 1 C T - ScafM SNP 0057.scaffold00207 379942 1 G C scaffold14398 ScafM SNP 0057.scaffold00207 379945 1 C T scaffold14398 ScafM SNP 0057.scaffold00207 379947 1 A G scaffold14398 ScafM SNP 0057.scaffold00207 379951 1 T C scaffold14398 Both SNP 0057.scaffold00207 379960 1 T G scaffold14398 ScafM SNP 0057.scaffold00207 379999 1 G A scaffold14398 ScafM SNP 0057.scaffold00207 380005 2 GA AC scaffold14398 ScafM INDEL 0057.scaffold00207 380012 1 A . scaffold14398 ScafM SNP 0057.scaffold00207 380016 1 T A scaffold14398 ReadM INDEL 0057.scaffold00207 380127 1 T . - ScafM SNP 0057.scaffold00207 380248 1 T C scaffold6954 ScafM INDEL 0057.scaffold00207 380278 5 AAAAA ..... scaffold6954 Both SNP 0057.scaffold00207 380325 1 C T scaffold6954 ScafM SNP 0057.scaffold00207 380464 1 A C scaffold6954 ScafM SNP 0057.scaffold00207 382252 1 A C scaffold5002 ScafM SNP 0057.scaffold00207 382272 1 G A scaffold5002 ScafM SNP 0057.scaffold00207 382325 1 C T scaffold5002 ScafM INDEL 0057.scaffold00207 383002 5 ..... CTTCT scaffold1350 ScafM SNP 0057.scaffold00207 383008 1 G A scaffold1350 ReadM SNP 0057.scaffold00207 386718 1 G T - ReadM INDEL 0057.scaffold00207 386780 1 . A - ReadM INDEL 0057.scaffold00207 386837 1 . C - ReadM SNP 0057.scaffold00207 386918 1 A G - ReadM SNP 0057.scaffold00207 387054 1 A C - ReadM SNP 0057.scaffold00207 387107 1 C T - ReadM SNP 0057.scaffold00207 387145 1 A C - ReadM SNP 0057.scaffold00207 387406 1 A C - ReadM SNP 0057.scaffold00207 387882 1 T C - ReadM SNP 0057.scaffold00207 388239 1 A T - ReadM SNP 0057.scaffold00207 388391 1 A G - ReadM SNP 0057.scaffold00207 388501 1 A G - ReadM SNP 0057.scaffold00207 388518 1 C A - ReadM SNP 0057.scaffold00207 388654 1 A T - ReadM SNP 0057.scaffold00207 388660 1 G C - ReadM SNP 0057.scaffold00207 388787 1 C T - ReadM SNP 0057.scaffold00207 388791 1 T G - ReadM SNP 0057.scaffold00207 388824 1 C T - ScafM SNP 0057.scaffold00207 391145 1 T G scaffold1054 ScafM INDEL 0057.scaffold00207 391161 1 . A scaffold1054 ScafM INDEL 0057.scaffold00207 391162 2 .. GT scaffold1054 ScafM INDEL 0057.scaffold00207 391163 1 . T scaffold1054 ScafM SNP 0057.scaffold00207 391165 1 A G scaffold1054 ScafM SNP 0057.scaffold00207 391173 2 TG CA scaffold1054 ScafM SNP 0057.scaffold00207 391181 1 A C scaffold1054 ScafM SNP 0057.scaffold00207 391194 1 T A scaffold1054 ScafM INDEL 0057.scaffold00207 391202 4 .... ACTG scaffold1054 ScafM SNP 0057.scaffold00207 391206 1 C G scaffold1054 ScafM SNP 0057.scaffold00207 391213 2 TC GA scaffold1054 ScafM SNP 0057.scaffold00207 391219 1 T G scaffold1054 ScafM INDEL 0057.scaffold00207 391233 4 TATA .... scaffold1054 ScafM INDEL 0057.scaffold00207 391240 1 T . scaffold1054 ScafM INDEL 0057.scaffold00207 391242 3 TTA ... scaffold1054 ScafM SNP 0057.scaffold00207 391248 1 C T scaffold1054 ScafM SNP 0057.scaffold00207 391259 1 A C scaffold1054 ScafM SNP 0057.scaffold00207 391261 1 A G scaffold1054 ScafM SNP 0057.scaffold00207 391276 1 A G scaffold1054 ScafM SNP 0057.scaffold00207 391279 1 T G scaffold1054 ScafM INDEL 0057.scaffold00207 391289 1 C . scaffold1054 ScafM SNP 0057.scaffold00207 391291 3 AGA TCT scaffold1054 ScafM SNP 0057.scaffold00207 391330 1 T C scaffold1054 ScafM SNP 0057.scaffold00207 391332 1 G A scaffold1054 ScafM SNP 0057.scaffold00207 391334 1 C T scaffold1054 ScafM SNP 0057.scaffold00207 391340 1 T G scaffold1054 ScafM SNP 0057.scaffold00207 391346 1 G C scaffold1054 ScafM INDEL 0057.scaffold00207 391385 3 CCA ... scaffold1054 ScafM SNP 0057.scaffold00207 391390 1 A C scaffold1054 ScafM INDEL 0057.scaffold00207 391394 3 TTC ... scaffold1054 ScafM SNP 0057.scaffold00207 391403 1 T C scaffold1054 ScafM SNP 0057.scaffold00207 391413 1 T C scaffold1054 ScafM SNP 0057.scaffold00207 391435 1 A G scaffold1054 ScafM INDEL 0057.scaffold00207 391440 1 A . scaffold1054 ScafM SNP 0057.scaffold00207 391442 1 A C scaffold1054 ScafM SNP 0057.scaffold00207 391444 2 AA CT scaffold1054 ScafM SNP 0057.scaffold00207 391460 1 T C scaffold1054 ScafM SNP 0057.scaffold00207 391464 3 TCC CAT scaffold1054 ScafM INDEL 0057.scaffold00207 391471 1 . C scaffold1054 ScafM SNP 0057.scaffold00207 391486 1 G T scaffold1054 ScafM SNP 0057.scaffold00207 391491 1 A G scaffold1054 ScafM SNP 0057.scaffold00207 391517 1 G C scaffold1054 ScafM INDEL 0057.scaffold00207 391519 2 GT .. scaffold1054 ScafM SNP 0057.scaffold00207 391523 1 A G scaffold1054 ScafM SNP 0057.scaffold00207 391830 1 T G scaffold4111 ScafM INDEL 0057.scaffold00207 391867 4 GTCT .... scaffold4111 ScafM INDEL 0057.scaffold00207 391873 9 AAGTCTTGC ......... scaffold4111 ScafM INDEL 0057.scaffold00207 391885 5 TCTAG ..... scaffold4111 ScafM INDEL 0057.scaffold00207 391891 1 T . scaffold4111 ScafM INDEL 0057.scaffold00207 391893 1 T . scaffold4111 ScafM SNP 0057.scaffold00207 391980 1 C T scaffold4111 ScafM SNP 0057.scaffold00207 392007 1 T G scaffold4111 ScafM SNP 0057.scaffold00207 392159 1 C A scaffold4111 ScafM SNP 0057.scaffold00207 392164 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 392175 2 GA AG scaffold4111 ScafM SNP 0057.scaffold00207 392189 1 C T scaffold4111 ScafM SNP 0057.scaffold00207 392212 1 G A scaffold4111 ReadM SNP 0057.scaffold00207 392249 1 A T - ReadM SNP 0057.scaffold00207 392257 1 C T - ScafM SNP 0057.scaffold00207 392328 1 G A scaffold4111 ScafM INDEL 0057.scaffold00207 392374 1 A . scaffold4111 Both SNP 0057.scaffold00207 392446 1 C T scaffold4111 Both SNP 0057.scaffold00207 392474 1 C T scaffold4111 Both SNP 0057.scaffold00207 392511 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 392573 1 G A scaffold4111 ReadM SNP 0057.scaffold00207 392768 1 A G - ReadM SNP 0057.scaffold00207 392853 1 G A - ReadM SNP 0057.scaffold00207 392893 1 T C - ReadM SNP 0057.scaffold00207 395397 1 G A - ReadM SNP 0057.scaffold00207 395429 1 A G - ScafM INDEL 0057.scaffold00207 395734 1 . A scaffold4111 ReadM INDEL 0057.scaffold00207 395774 1 . A - ReadM SNP 0057.scaffold00207 395788 1 A G - Both INDEL 0057.scaffold00207 395826 1 . A scaffold4111 ScafM SNP 0057.scaffold00207 395919 1 C A scaffold4111 ScafM SNP 0057.scaffold00207 395958 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 396016 1 C T scaffold4111 Both SNP 0057.scaffold00207 396172 1 A G scaffold4111 Both SNP 0057.scaffold00207 396212 1 A G scaffold4111 ScafM INDEL 0057.scaffold00207 396228 1 . T scaffold4111 Both SNP 0057.scaffold00207 396326 1 G A scaffold4111 Both SNP 0057.scaffold00207 396386 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 396415 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 396421 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 396429 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 396431 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 396434 1 C G scaffold4111 Both SNP 0057.scaffold00207 396617 1 T C scaffold4111 Both SNP 0057.scaffold00207 396809 1 A G scaffold4111 Both SNP 0057.scaffold00207 396812 1 G A scaffold4111 Both SNP 0057.scaffold00207 396918 1 A C scaffold4111 Both SNP 0057.scaffold00207 397043 1 A G scaffold4111 Both SNP 0057.scaffold00207 397088 1 C T scaffold4111 Both SNP 0057.scaffold00207 397099 1 A C scaffold4111 Both SNP 0057.scaffold00207 397102 1 G C scaffold4111 Both SNP 0057.scaffold00207 397210 1 A G scaffold4111 Both SNP 0057.scaffold00207 397299 1 A G scaffold4111 Both SNP 0057.scaffold00207 397407 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 397496 1 C T scaffold4111 ScafM SNP 0057.scaffold00207 397537 1 C T scaffold4111 ScafM SNP 0057.scaffold00207 397560 2 AA GT scaffold4111 ScafM INDEL 0057.scaffold00207 397586 1 T . scaffold4111 ScafM SNP 0057.scaffold00207 397651 1 C A scaffold4111 ScafM SNP 0057.scaffold00207 397669 1 A T scaffold4111 ScafM SNP 0057.scaffold00207 397713 1 G A scaffold4111 Both SNP 0057.scaffold00207 398043 1 G A scaffold10623 Both SNP 0057.scaffold00207 398166 1 T C scaffold10623 ScafM INDEL 0057.scaffold00207 398378 27 TTTTCTTTTTTTTTTCTCTGTGCTCAC ........................... scaffold10623 ScafM INDEL 0057.scaffold00207 398407 2 GG .. scaffold10623 ScafM INDEL 0057.scaffold00207 398411 3 GAA ... scaffold10623 ScafM INDEL 0057.scaffold00207 398416 2 TT .. scaffold10623 ScafM INDEL 0057.scaffold00207 398419 3 ATT ... scaffold10623 ScafM SNP 0057.scaffold00207 398449 1 T G scaffold10623 ScafM SNP 0057.scaffold00207 398530 1 C T scaffold10623 ScafM INDEL 0057.scaffold00207 398605 37 GGTTTCTATAAATGTTGCTGGTTTCTATGAATTTTGT ..................................... scaffold10623 ScafM SNP 0057.scaffold00207 398657 1 G T scaffold10623 ScafM SNP 0057.scaffold00207 398667 1 T C scaffold10623 ScafM SNP 0057.scaffold00207 398671 1 T A scaffold10623 ScafM INDEL 0057.scaffold00207 398685 1 T . scaffold10623 ScafM SNP 0057.scaffold00207 398695 1 C T scaffold10623 ScafM SNP 0057.scaffold00207 398741 1 C A scaffold10623 ScafM SNP 0057.scaffold00207 398798 1 A G scaffold10623 ReadM SNP 0057.scaffold00207 399392 1 T C - ReadM SNP 0057.scaffold00207 399401 1 T C - ReadM SNP 0057.scaffold00207 399568 1 G A - ReadM SNP 0057.scaffold00207 399642 1 T C - ReadM SNP 0057.scaffold00207 399856 1 A G - ReadM SNP 0057.scaffold00207 399887 1 A C - ReadM SNP 0057.scaffold00207 399993 1 T C - ReadM SNP 0057.scaffold00207 400102 1 G A - ReadM SNP 0057.scaffold00207 400324 1 C T - ReadM SNP 0057.scaffold00207 400383 1 A G - ReadM SNP 0057.scaffold00207 400399 1 G A - ReadM SNP 0057.scaffold00207 400601 1 G A - ReadM SNP 0057.scaffold00207 400616 1 G C - ReadM SNP 0057.scaffold00207 400631 1 A G - ReadM SNP 0057.scaffold00207 400738 1 C T - ReadM SNP 0057.scaffold00207 400853 1 C T - ReadM SNP 0057.scaffold00207 400916 1 C A - ReadM SNP 0057.scaffold00207 400932 1 T A - ReadM SNP 0057.scaffold00207 400962 1 A T - ReadM SNP 0057.scaffold00207 400993 1 T C - ReadM SNP 0057.scaffold00207 401097 1 A G - ReadM SNP 0057.scaffold00207 401105 1 C A - ReadM SNP 0057.scaffold00207 401142 1 T A - ReadM SNP 0057.scaffold00207 401328 1 G A - ReadM SNP 0057.scaffold00207 401349 1 G A - ReadM SNP 0057.scaffold00207 401390 1 C T - ReadM SNP 0057.scaffold00207 401504 1 T C - ReadM SNP 0057.scaffold00207 401734 1 A G - ReadM SNP 0057.scaffold00207 401749 1 C T - ReadM SNP 0057.scaffold00207 401924 1 T C - ReadM SNP 0057.scaffold00207 401959 1 A C - ReadM SNP 0057.scaffold00207 402050 1 C T - ReadM SNP 0057.scaffold00207 402231 1 A G - ReadM SNP 0057.scaffold00207 402237 1 A T - ReadM SNP 0057.scaffold00207 402961 1 A G - ReadM SNP 0057.scaffold00207 403109 1 A T - ReadM SNP 0057.scaffold00207 403249 1 G A - ReadM SNP 0057.scaffold00207 403471 1 C A - ReadM SNP 0057.scaffold00207 403510 1 G A - ReadM SNP 0057.scaffold00207 403621 1 G A - ReadM SNP 0057.scaffold00207 403693 1 A C - ReadM SNP 0057.scaffold00207 403714 1 T G - ReadM SNP 0057.scaffold00207 403898 1 G A - ReadM SNP 0057.scaffold00207 403900 1 T C - ReadM SNP 0057.scaffold00207 403996 1 A G - ReadM SNP 0057.scaffold00207 404024 1 G A - ReadM SNP 0057.scaffold00207 404058 1 G C - ScafM SNP 0057.scaffold00207 404231 2 TT CA scaffold4111 ScafM SNP 0057.scaffold00207 404295 1 G A scaffold4111 ReadM SNP 0057.scaffold00207 404351 1 C A - ReadM SNP 0057.scaffold00207 404506 1 G T - ReadM SNP 0057.scaffold00207 404560 1 G T - ReadM SNP 0057.scaffold00207 404564 1 A G - ReadM SNP 0057.scaffold00207 404706 1 A T - ReadM SNP 0057.scaffold00207 404748 1 A G - ReadM SNP 0057.scaffold00207 404823 1 G A - ReadM SNP 0057.scaffold00207 404964 1 C A - ReadM SNP 0057.scaffold00207 405017 1 C T - ReadM SNP 0057.scaffold00207 405046 1 G C - ReadM SNP 0057.scaffold00207 405089 1 A T - ReadM SNP 0057.scaffold00207 405115 1 T C - ReadM SNP 0057.scaffold00207 405127 1 A G - ReadM SNP 0057.scaffold00207 405172 1 T A - ReadM SNP 0057.scaffold00207 405217 1 T C - ReadM SNP 0057.scaffold00207 405284 1 G A - ReadM SNP 0057.scaffold00207 405307 1 A G - ReadM SNP 0057.scaffold00207 405335 1 T C - ReadM SNP 0057.scaffold00207 405433 1 T C - ReadM SNP 0057.scaffold00207 405483 1 C T - ReadM SNP 0057.scaffold00207 405620 1 A C - ReadM SNP 0057.scaffold00207 405643 1 G A - ReadM SNP 0057.scaffold00207 405661 1 C A - ReadM SNP 0057.scaffold00207 405692 1 G T - ReadM SNP 0057.scaffold00207 405750 1 T C - ReadM SNP 0057.scaffold00207 405759 1 G C - ReadM SNP 0057.scaffold00207 405774 1 G C - ReadM SNP 0057.scaffold00207 405851 1 A C - ReadM SNP 0057.scaffold00207 405863 1 C T - ReadM SNP 0057.scaffold00207 405929 2 TG CA - ReadM SNP 0057.scaffold00207 405977 1 G A - ReadM SNP 0057.scaffold00207 406063 1 A G - ReadM SNP 0057.scaffold00207 406085 1 T G - ReadM SNP 0057.scaffold00207 406244 1 A G - ReadM SNP 0057.scaffold00207 406278 1 A C - ReadM SNP 0057.scaffold00207 406392 1 T A - ReadM SNP 0057.scaffold00207 406449 1 A G - ReadM SNP 0057.scaffold00207 406511 1 A T - ReadM SNP 0057.scaffold00207 406532 1 T C - ReadM SNP 0057.scaffold00207 406584 1 G A - ReadM SNP 0057.scaffold00207 406965 1 T C - ReadM SNP 0057.scaffold00207 407022 1 C T - ReadM SNP 0057.scaffold00207 407033 1 G C - ReadM SNP 0057.scaffold00207 407053 1 T A - ReadM SNP 0057.scaffold00207 407101 1 C G - ReadM SNP 0057.scaffold00207 407105 1 T A - ReadM SNP 0057.scaffold00207 407165 1 T C - ReadM SNP 0057.scaffold00207 407212 1 G A - ReadM SNP 0057.scaffold00207 407223 1 T C - ReadM SNP 0057.scaffold00207 407334 1 C A - ReadM SNP 0057.scaffold00207 407419 1 C G - ReadM SNP 0057.scaffold00207 407436 1 A G - ReadM SNP 0057.scaffold00207 407763 1 A C - ReadM SNP 0057.scaffold00207 407783 1 T A - ReadM SNP 0057.scaffold00207 407834 1 C A - ReadM SNP 0057.scaffold00207 407925 1 A G - ReadM SNP 0057.scaffold00207 407976 1 C A - ReadM SNP 0057.scaffold00207 407985 1 G C - ReadM SNP 0057.scaffold00207 408028 1 A G - ReadM SNP 0057.scaffold00207 408067 1 G A - ReadM SNP 0057.scaffold00207 408087 1 A T - ReadM SNP 0057.scaffold00207 408128 1 A G - ReadM SNP 0057.scaffold00207 408142 1 T C - ReadM SNP 0057.scaffold00207 408168 1 T C - ReadM SNP 0057.scaffold00207 408324 1 C T - ReadM SNP 0057.scaffold00207 408351 1 T C - ReadM SNP 0057.scaffold00207 408394 1 A G - ReadM SNP 0057.scaffold00207 408609 1 C T - ReadM SNP 0057.scaffold00207 408626 1 G A - ReadM SNP 0057.scaffold00207 408788 1 G A - ReadM SNP 0057.scaffold00207 408790 1 T C - ReadM SNP 0057.scaffold00207 408802 1 C A - ReadM SNP 0057.scaffold00207 408955 1 A G - ReadM SNP 0057.scaffold00207 409049 1 G C - ReadM SNP 0057.scaffold00207 409111 1 G A - ReadM SNP 0057.scaffold00207 409160 1 G A - ReadM SNP 0057.scaffold00207 409340 1 C A - ReadM SNP 0057.scaffold00207 409386 1 T C - ReadM SNP 0057.scaffold00207 409393 1 T C - ReadM SNP 0057.scaffold00207 409792 1 C T - ReadM SNP 0057.scaffold00207 409897 1 A G - ReadM SNP 0057.scaffold00207 410039 1 C T - ReadM SNP 0057.scaffold00207 410061 1 A C - ReadM SNP 0057.scaffold00207 410118 1 A G - ReadM SNP 0057.scaffold00207 410168 1 T G - ReadM SNP 0057.scaffold00207 410179 1 C G - ReadM SNP 0057.scaffold00207 410372 1 G A - ReadM SNP 0057.scaffold00207 410436 1 A T - ReadM SNP 0057.scaffold00207 410718 1 G A - ReadM SNP 0057.scaffold00207 410775 1 C G - ReadM SNP 0057.scaffold00207 410871 1 C G - ReadM SNP 0057.scaffold00207 411084 1 A T - ReadM SNP 0057.scaffold00207 411110 1 A G - ReadM SNP 0057.scaffold00207 411116 1 T C - ReadM SNP 0057.scaffold00207 411252 1 C T - ReadM INDEL 0057.scaffold00207 411383 1 . T - ReadM SNP 0057.scaffold00207 411438 1 T G - ReadM SNP 0057.scaffold00207 411491 1 T G - ReadM SNP 0057.scaffold00207 411568 1 G A - ReadM SNP 0057.scaffold00207 411606 1 G A - ReadM SNP 0057.scaffold00207 411624 1 T C - ReadM SNP 0057.scaffold00207 411627 1 T A - ReadM SNP 0057.scaffold00207 411752 1 C A - ReadM SNP 0057.scaffold00207 411763 1 G A - ReadM SNP 0057.scaffold00207 411795 1 C T - ReadM SNP 0057.scaffold00207 411959 1 G A - ReadM SNP 0057.scaffold00207 412011 1 A G - ReadM SNP 0057.scaffold00207 412031 1 C T - ReadM SNP 0057.scaffold00207 412040 1 T G - ReadM SNP 0057.scaffold00207 412201 1 G A - ReadM SNP 0057.scaffold00207 412213 1 G A - ReadM SNP 0057.scaffold00207 412406 1 T C - ReadM SNP 0057.scaffold00207 412452 1 A T - ReadM SNP 0057.scaffold00207 412462 1 T G - ReadM SNP 0057.scaffold00207 412495 1 G C - ReadM SNP 0057.scaffold00207 412560 1 G A - ReadM SNP 0057.scaffold00207 412619 1 T C - ReadM SNP 0057.scaffold00207 412661 1 T C - ReadM SNP 0057.scaffold00207 412666 1 C T - ReadM SNP 0057.scaffold00207 412774 1 T C - ReadM SNP 0057.scaffold00207 412780 1 C T - ReadM SNP 0057.scaffold00207 412791 1 T G - ReadM SNP 0057.scaffold00207 412890 1 A T - ReadM SNP 0057.scaffold00207 412917 1 A G - ReadM SNP 0057.scaffold00207 412943 1 T C - ReadM SNP 0057.scaffold00207 412951 1 C T - ReadM SNP 0057.scaffold00207 413072 1 T C - ReadM SNP 0057.scaffold00207 413105 1 G A - ReadM SNP 0057.scaffold00207 413154 1 T G - ReadM SNP 0057.scaffold00207 413240 1 C T - ReadM SNP 0057.scaffold00207 413321 1 A G - ReadM SNP 0057.scaffold00207 413370 1 A T - ReadM SNP 0057.scaffold00207 413432 1 G A - ReadM SNP 0057.scaffold00207 413445 1 A C - ReadM SNP 0057.scaffold00207 413476 1 G A - ReadM SNP 0057.scaffold00207 413516 1 A G - ReadM SNP 0057.scaffold00207 413541 1 A T - ReadM SNP 0057.scaffold00207 413559 1 T C - ReadM SNP 0057.scaffold00207 413782 1 G A - ReadM SNP 0057.scaffold00207 413787 1 T A - ReadM SNP 0057.scaffold00207 413801 1 T A - Both SNP 0057.scaffold00207 413904 1 T C scaffold4111 Both SNP 0057.scaffold00207 413907 1 C A scaffold4111 Both SNP 0057.scaffold00207 413913 1 T A scaffold4111 Both SNP 0057.scaffold00207 413945 1 G A scaffold4111 Both SNP 0057.scaffold00207 413998 1 C A scaffold4111 ScafM SNP 0057.scaffold00207 414072 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 414088 1 T G scaffold4111 ScafM SNP 0057.scaffold00207 414090 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 414099 1 C G scaffold4111 ScafM SNP 0057.scaffold00207 414121 1 G T scaffold4111 ReadM SNP 0057.scaffold00207 414200 1 T C - ReadM SNP 0057.scaffold00207 414242 1 A G - ReadM SNP 0057.scaffold00207 416840 1 T C - ReadM SNP 0057.scaffold00207 416889 1 G A - ReadM SNP 0057.scaffold00207 418498 1 A T - ReadM SNP 0057.scaffold00207 418514 1 T A - ReadM SNP 0057.scaffold00207 418587 1 G A - ReadM SNP 0057.scaffold00207 418594 1 T A - ReadM SNP 0057.scaffold00207 418607 1 G C - ReadM SNP 0057.scaffold00207 419114 1 A T - ReadM SNP 0057.scaffold00207 419198 1 T A - ReadM SNP 0057.scaffold00207 419213 1 T C - ScafM SNP 0057.scaffold00207 419328 1 A T scaffold152 ScafM SNP 0057.scaffold00207 419344 1 C T scaffold152 ScafM SNP 0057.scaffold00207 419370 1 C T scaffold152 ScafM SNP 0057.scaffold00207 419375 1 A G scaffold152 ScafM SNP 0057.scaffold00207 419405 1 A T scaffold152 ScafM SNP 0057.scaffold00207 419414 1 G A scaffold152 ScafM SNP 0057.scaffold00207 419424 1 T A scaffold152 ReadM SNP 0057.scaffold00207 419826 1 A T - ReadM SNP 0057.scaffold00207 420045 1 T G - ReadM SNP 0057.scaffold00207 420082 1 A G - ReadM SNP 0057.scaffold00207 420096 1 A C - ReadM SNP 0057.scaffold00207 420104 1 T C - ReadM SNP 0057.scaffold00207 420198 1 T C - ReadM INDEL 0057.scaffold00207 420206 1 C . - ReadM SNP 0057.scaffold00207 420320 1 A G - ReadM SNP 0057.scaffold00207 420412 1 T C - ReadM SNP 0057.scaffold00207 420541 1 A G - ReadM SNP 0057.scaffold00207 420557 1 T A - ReadM SNP 0057.scaffold00207 420635 1 T C - ReadM SNP 0057.scaffold00207 420698 1 C T - ReadM SNP 0057.scaffold00207 420737 1 T C - ReadM SNP 0057.scaffold00207 420743 1 G A - ReadM SNP 0057.scaffold00207 420801 1 A T - ReadM SNP 0057.scaffold00207 420809 1 G A - ReadM SNP 0057.scaffold00207 420828 1 G A - ReadM SNP 0057.scaffold00207 420965 1 T G - ReadM SNP 0057.scaffold00207 421051 1 T A - ReadM INDEL 0057.scaffold00207 421064 2 AA .. - ReadM SNP 0057.scaffold00207 421242 1 G T - ReadM SNP 0057.scaffold00207 421317 1 G A - ReadM SNP 0057.scaffold00207 421588 1 T G - ReadM SNP 0057.scaffold00207 421663 1 G C - ReadM SNP 0057.scaffold00207 421794 1 G T - ReadM SNP 0057.scaffold00207 421859 1 G A - ReadM SNP 0057.scaffold00207 422187 1 G A - ReadM SNP 0057.scaffold00207 422226 1 G T - ReadM SNP 0057.scaffold00207 422268 1 G C - ReadM SNP 0057.scaffold00207 422375 1 A G - ReadM SNP 0057.scaffold00207 422541 1 G A - ReadM SNP 0057.scaffold00207 422550 1 G A - ReadM SNP 0057.scaffold00207 422602 1 G A - ReadM SNP 0057.scaffold00207 422604 1 C T - ReadM SNP 0057.scaffold00207 422742 1 C A - ReadM SNP 0057.scaffold00207 423005 1 G A - ReadM SNP 0057.scaffold00207 423029 1 T G - ReadM SNP 0057.scaffold00207 423038 1 T G - ReadM SNP 0057.scaffold00207 423088 1 G A - ReadM SNP 0057.scaffold00207 423181 1 A G - ReadM SNP 0057.scaffold00207 423185 1 G T - ReadM SNP 0057.scaffold00207 423194 1 C T - ReadM SNP 0057.scaffold00207 423318 1 G C - ReadM SNP 0057.scaffold00207 423333 1 C A - ReadM SNP 0057.scaffold00207 423394 1 A G - ReadM SNP 0057.scaffold00207 423398 1 G A - ReadM SNP 0057.scaffold00207 423484 1 T C - ReadM SNP 0057.scaffold00207 423667 1 G A - ReadM SNP 0057.scaffold00207 423678 1 A G - ReadM SNP 0057.scaffold00207 423692 1 G A - ReadM INDEL 0057.scaffold00207 423722 1 . T - ReadM SNP 0057.scaffold00207 423829 1 T C - ReadM SNP 0057.scaffold00207 424813 1 C T - ReadM SNP 0057.scaffold00207 424876 1 T C - ReadM SNP 0057.scaffold00207 424878 1 G A - ReadM SNP 0057.scaffold00207 424935 1 C T - ReadM SNP 0057.scaffold00207 424951 1 G A - ReadM SNP 0057.scaffold00207 425093 1 T C - ReadM SNP 0057.scaffold00207 425116 1 C T - ReadM SNP 0057.scaffold00207 425187 1 T C - ReadM SNP 0057.scaffold00207 425259 1 C G - ReadM SNP 0057.scaffold00207 425375 1 A C - ReadM SNP 0057.scaffold00207 425515 1 C T - ReadM SNP 0057.scaffold00207 425541 1 A G - ReadM SNP 0057.scaffold00207 425688 1 T A - ReadM SNP 0057.scaffold00207 425771 1 C T - ReadM SNP 0057.scaffold00207 425776 1 A G - ReadM SNP 0057.scaffold00207 425930 1 C T - ReadM SNP 0057.scaffold00207 425936 1 A G - ReadM SNP 0057.scaffold00207 425960 1 G A - ReadM SNP 0057.scaffold00207 425999 1 T C - ReadM SNP 0057.scaffold00207 426007 1 C T - ReadM SNP 0057.scaffold00207 426020 1 C G - ReadM SNP 0057.scaffold00207 426081 1 T G - ReadM SNP 0057.scaffold00207 426084 1 T C - ReadM SNP 0057.scaffold00207 426139 1 C T - ReadM SNP 0057.scaffold00207 426142 1 C T - ReadM SNP 0057.scaffold00207 426151 1 G A - ReadM SNP 0057.scaffold00207 426227 1 T C - ReadM SNP 0057.scaffold00207 426256 1 A G - ReadM SNP 0057.scaffold00207 426295 1 T C - ReadM SNP 0057.scaffold00207 426335 1 T A - ReadM SNP 0057.scaffold00207 426338 1 C A - ReadM SNP 0057.scaffold00207 426488 1 A G - ReadM SNP 0057.scaffold00207 426562 1 T A - ReadM SNP 0057.scaffold00207 426716 1 G T - ReadM SNP 0057.scaffold00207 426734 1 G A - ReadM SNP 0057.scaffold00207 426976 1 T G - ReadM SNP 0057.scaffold00207 426993 1 T G - ReadM SNP 0057.scaffold00207 427001 1 G T - ReadM SNP 0057.scaffold00207 427135 1 C T - ReadM SNP 0057.scaffold00207 427181 1 T C - ReadM SNP 0057.scaffold00207 427260 1 T A - ReadM SNP 0057.scaffold00207 427323 1 A G - ReadM SNP 0057.scaffold00207 427335 1 T C - ReadM SNP 0057.scaffold00207 427446 1 G T - ReadM SNP 0057.scaffold00207 427473 1 C T - ReadM SNP 0057.scaffold00207 427476 1 C T - ReadM SNP 0057.scaffold00207 427762 1 G C - ReadM SNP 0057.scaffold00207 427834 2 GC TT - ReadM SNP 0057.scaffold00207 427853 1 C A - ReadM SNP 0057.scaffold00207 427986 1 T C - ReadM SNP 0057.scaffold00207 427996 1 C T - ReadM SNP 0057.scaffold00207 428049 1 C T - ReadM INDEL 0057.scaffold00207 428115 1 . A - ReadM SNP 0057.scaffold00207 428131 1 G T - ReadM SNP 0057.scaffold00207 428153 1 A G - ReadM SNP 0057.scaffold00207 428455 1 G A - ReadM SNP 0057.scaffold00207 428513 1 T G - ReadM SNP 0057.scaffold00207 428589 1 G A - ReadM SNP 0057.scaffold00207 428704 1 A G - ReadM SNP 0057.scaffold00207 428858 1 A G - ReadM SNP 0057.scaffold00207 429052 1 G A - ReadM SNP 0057.scaffold00207 429057 1 T C - ReadM SNP 0057.scaffold00207 429087 1 C T - ReadM SNP 0057.scaffold00207 429134 1 G A - ReadM SNP 0057.scaffold00207 429173 1 A G - ReadM SNP 0057.scaffold00207 429194 1 C T - ReadM SNP 0057.scaffold00207 429315 1 G T - ReadM SNP 0057.scaffold00207 429406 1 T G - ReadM SNP 0057.scaffold00207 429440 1 A C - ReadM SNP 0057.scaffold00207 429452 1 C T - ReadM SNP 0057.scaffold00207 429604 1 T C - ReadM SNP 0057.scaffold00207 429606 1 G A - ReadM SNP 0057.scaffold00207 429696 1 G C - ReadM SNP 0057.scaffold00207 429724 1 A G - ReadM SNP 0057.scaffold00207 429814 1 C G - ReadM SNP 0057.scaffold00207 429822 1 C T - ReadM SNP 0057.scaffold00207 429825 1 G A - ReadM SNP 0057.scaffold00207 429896 1 C T - ReadM SNP 0057.scaffold00207 429947 1 A G - ReadM SNP 0057.scaffold00207 430012 1 T C - ReadM SNP 0057.scaffold00207 430049 1 A C - ReadM SNP 0057.scaffold00207 430170 1 C G - ReadM SNP 0057.scaffold00207 430192 1 A C - ReadM SNP 0057.scaffold00207 430196 1 A C - ReadM SNP 0057.scaffold00207 430324 1 T C - ReadM SNP 0057.scaffold00207 430346 1 C T - ReadM SNP 0057.scaffold00207 430397 1 C G - ReadM SNP 0057.scaffold00207 430472 1 T C - ReadM SNP 0057.scaffold00207 430705 1 A G - ReadM SNP 0057.scaffold00207 430771 1 A G - ReadM SNP 0057.scaffold00207 430831 1 C A - ReadM SNP 0057.scaffold00207 430875 1 A T - ReadM SNP 0057.scaffold00207 430907 1 A C - ReadM SNP 0057.scaffold00207 430953 1 C A - ReadM INDEL 0057.scaffold00207 430980 1 . T - ReadM SNP 0057.scaffold00207 431040 1 C T - ReadM SNP 0057.scaffold00207 431049 1 C A - ReadM SNP 0057.scaffold00207 431264 1 A G - ReadM SNP 0057.scaffold00207 431399 1 T C - ReadM SNP 0057.scaffold00207 431412 1 T C - ReadM SNP 0057.scaffold00207 431452 1 T C - ReadM SNP 0057.scaffold00207 431476 1 G A - ReadM SNP 0057.scaffold00207 431543 1 T C - ReadM SNP 0057.scaffold00207 431558 1 C T - ReadM SNP 0057.scaffold00207 431710 1 C T - ReadM SNP 0057.scaffold00207 431728 1 A G - ReadM SNP 0057.scaffold00207 431915 1 C T - ReadM SNP 0057.scaffold00207 431918 1 C G - ReadM SNP 0057.scaffold00207 431983 1 C G - ReadM SNP 0057.scaffold00207 431989 1 C T - ReadM SNP 0057.scaffold00207 432061 1 G T - ReadM SNP 0057.scaffold00207 432101 1 A C - ReadM SNP 0057.scaffold00207 432121 1 T C - ReadM SNP 0057.scaffold00207 432173 1 C T - ReadM SNP 0057.scaffold00207 432196 1 G A - ReadM INDEL 0057.scaffold00207 432361 1 T . - ReadM SNP 0057.scaffold00207 432378 1 T C - ReadM SNP 0057.scaffold00207 432391 1 A C - ReadM SNP 0057.scaffold00207 432448 1 A G - ReadM SNP 0057.scaffold00207 432479 1 A T - ReadM SNP 0057.scaffold00207 432502 1 C T - ReadM SNP 0057.scaffold00207 432559 1 T A - ReadM SNP 0057.scaffold00207 432774 1 G A - ReadM SNP 0057.scaffold00207 432780 1 C T - ReadM SNP 0057.scaffold00207 432793 1 A G - ReadM SNP 0057.scaffold00207 432974 1 G C - ReadM SNP 0057.scaffold00207 432982 1 A G - ReadM SNP 0057.scaffold00207 433000 1 A G - ReadM SNP 0057.scaffold00207 433036 1 G A - ReadM SNP 0057.scaffold00207 433065 1 C T - ReadM SNP 0057.scaffold00207 433087 1 G C - ReadM SNP 0057.scaffold00207 433305 1 T G - ReadM SNP 0057.scaffold00207 433338 1 C G - ReadM SNP 0057.scaffold00207 433397 1 T A - ReadM SNP 0057.scaffold00207 433405 1 A G - ReadM SNP 0057.scaffold00207 433533 1 A G - ReadM SNP 0057.scaffold00207 433538 1 G T - ReadM SNP 0057.scaffold00207 433594 1 T C - ReadM SNP 0057.scaffold00207 433714 1 C G - ReadM SNP 0057.scaffold00207 433741 1 T C - ScafM SNP 0057.scaffold00207 434299 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434320 1 T C scaffold4111 ScafM INDEL 0057.scaffold00207 434342 1 . G scaffold4111 ScafM SNP 0057.scaffold00207 434371 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434406 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 434454 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 434461 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434468 1 G C scaffold4111 ScafM SNP 0057.scaffold00207 434479 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434494 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 434505 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434520 1 G A scaffold4111 ScafM SNP 0057.scaffold00207 434526 2 CC TG scaffold4111 ScafM SNP 0057.scaffold00207 434547 1 A G scaffold4111 ScafM SNP 0057.scaffold00207 434554 1 C T scaffold4111 ScafM SNP 0057.scaffold00207 434575 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 434589 2 CA AG scaffold4111 ScafM SNP 0057.scaffold00207 434610 1 G C scaffold4111 ScafM SNP 0057.scaffold00207 434618 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 434641 1 A C scaffold4111 ReadM SNP 0057.scaffold00207 434806 1 C G - ReadM INDEL 0057.scaffold00207 434852 1 . T - ReadM SNP 0057.scaffold00207 434918 1 C T - ReadM SNP 0057.scaffold00207 434930 1 G T - ScafM SNP 0057.scaffold00207 435034 1 T C scaffold4111 ScafM INDEL 0057.scaffold00207 435064 2 CG .T scaffold4111 ScafM SNP 0057.scaffold00207 435093 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 435105 1 T C scaffold4111 ReadM SNP 0057.scaffold00207 435190 1 A T - ReadM SNP 0057.scaffold00207 435268 1 G C - ReadM SNP 0057.scaffold00207 435320 1 T C - ReadM SNP 0057.scaffold00207 435439 1 A G - ReadM SNP 0057.scaffold00207 435473 1 G A - ReadM SNP 0057.scaffold00207 435731 1 T G - ReadM SNP 0057.scaffold00207 435735 1 A G - ReadM SNP 0057.scaffold00207 435785 1 C G - ReadM SNP 0057.scaffold00207 435832 1 A G - ReadM SNP 0057.scaffold00207 435904 1 G A - ReadM SNP 0057.scaffold00207 435930 1 G A - ReadM SNP 0057.scaffold00207 436016 1 G T - ReadM SNP 0057.scaffold00207 436086 1 G A - ReadM SNP 0057.scaffold00207 436111 1 C T - ReadM SNP 0057.scaffold00207 436275 1 A G - ReadM SNP 0057.scaffold00207 436280 1 C T - ReadM SNP 0057.scaffold00207 436593 1 T G - ReadM SNP 0057.scaffold00207 436887 1 A G - ReadM SNP 0057.scaffold00207 436953 1 A G - ReadM SNP 0057.scaffold00207 437708 1 G A - ReadM SNP 0057.scaffold00207 438150 1 A G - ReadM INDEL 0057.scaffold00207 438243 1 . T - ReadM SNP 0057.scaffold00207 438594 1 A C - ReadM SNP 0057.scaffold00207 438776 2 TT CC - ReadM SNP 0057.scaffold00207 438845 1 A T - ReadM SNP 0057.scaffold00207 438861 1 A T - ReadM SNP 0057.scaffold00207 438912 1 A G - ReadM SNP 0057.scaffold00207 439160 1 T A - ReadM SNP 0057.scaffold00207 439262 1 G T - ReadM SNP 0057.scaffold00207 439335 1 A G - ReadM SNP 0057.scaffold00207 439346 1 A G - ReadM SNP 0057.scaffold00207 439382 1 C T - ReadM SNP 0057.scaffold00207 439539 1 G A - ReadM SNP 0057.scaffold00207 439557 1 G A - ReadM SNP 0057.scaffold00207 439744 1 G A - ReadM SNP 0057.scaffold00207 439928 1 C G - ReadM SNP 0057.scaffold00207 439931 1 A G - ReadM SNP 0057.scaffold00207 439989 1 T G - ReadM SNP 0057.scaffold00207 440013 1 C G - ReadM SNP 0057.scaffold00207 440034 1 C T - Both SNP 0057.scaffold00207 440163 1 A C scaffold4111 Both SNP 0057.scaffold00207 440206 1 T C scaffold4111 ScafM SNP 0057.scaffold00207 440219 1 C T scaffold4111 ScafM INDEL 0057.scaffold00207 440226 1 A . scaffold4111 ReadM SNP 0057.scaffold00207 440264 1 T C - ReadM SNP 0057.scaffold00207 440402 1 C T - ReadM SNP 0057.scaffold00207 440451 1 A T - ReadM SNP 0057.scaffold00207 440481 1 C T - ReadM SNP 0057.scaffold00207 440541 1 C T - ReadM SNP 0057.scaffold00207 440711 1 G A - ReadM SNP 0057.scaffold00207 440783 1 A C - ReadM SNP 0057.scaffold00207 440808 1 C T - ReadM SNP 0057.scaffold00207 440856 1 A T - ScafM INDEL 0057.scaffold00207 440970 11 ATTGGTGACTT ........... scaffold4111 Both SNP 0057.scaffold00207 441041 1 C T scaffold4111 ReadM SNP 0057.scaffold00207 441076 1 G A - ReadM INDEL 0057.scaffold00207 441122 1 A . - ReadM SNP 0057.scaffold00207 441244 1 C T - ReadM SNP 0057.scaffold00207 441423 1 A G - ReadM SNP 0057.scaffold00207 441460 1 C G - ReadM SNP 0057.scaffold00207 441489 1 C T - ReadM SNP 0057.scaffold00207 441526 1 T A - ReadM SNP 0057.scaffold00207 441564 1 T C - ReadM SNP 0057.scaffold00207 441574 1 G C - ReadM SNP 0057.scaffold00207 441722 1 C T - ReadM SNP 0057.scaffold00207 441782 1 G A - ReadM SNP 0057.scaffold00207 441825 1 G A - ReadM SNP 0057.scaffold00207 441833 1 T C - ReadM SNP 0057.scaffold00207 441907 1 C T - ReadM SNP 0057.scaffold00207 441953 1 T A - ReadM SNP 0057.scaffold00207 441990 1 T C - ReadM SNP 0057.scaffold00207 442163 1 G A - ReadM SNP 0057.scaffold00207 442205 1 A C - ReadM SNP 0057.scaffold00207 442217 1 T C - ReadM SNP 0057.scaffold00207 442260 1 T C - ReadM SNP 0057.scaffold00207 442419 1 G A - ReadM SNP 0057.scaffold00207 442442 1 A G - ReadM SNP 0057.scaffold00207 442591 1 A T - ReadM SNP 0057.scaffold00207 442724 1 T G - ReadM SNP 0057.scaffold00207 443788 1 G C - ReadM SNP 0057.scaffold00207 443878 1 T C - ReadM SNP 0057.scaffold00207 443900 2 GT CC - ReadM SNP 0057.scaffold00207 443945 1 T C - ReadM SNP 0057.scaffold00207 444013 1 C G - ReadM SNP 0057.scaffold00207 444024 1 G A - ReadM SNP 0057.scaffold00207 444099 1 T C - ReadM SNP 0057.scaffold00207 444150 1 A G - ReadM SNP 0057.scaffold00207 444387 1 A G - ReadM SNP 0057.scaffold00207 444397 1 C A - ReadM SNP 0057.scaffold00207 444479 1 T C - ReadM SNP 0057.scaffold00207 444497 1 A T - ReadM SNP 0057.scaffold00207 444630 1 G C - ReadM SNP 0057.scaffold00207 444681 1 G A - ReadM SNP 0057.scaffold00207 444689 1 A C - ReadM SNP 0057.scaffold00207 444712 1 T A - ReadM SNP 0057.scaffold00207 444727 1 A G - ReadM SNP 0057.scaffold00207 444824 1 C T - ReadM SNP 0057.scaffold00207 444853 1 C T - ReadM INDEL 0057.scaffold00207 444893 1 . A - ReadM SNP 0057.scaffold00207 445045 1 T A - ReadM SNP 0057.scaffold00207 445154 1 A G - ReadM SNP 0057.scaffold00207 445193 1 C G - ReadM SNP 0057.scaffold00207 445252 1 T C - ReadM SNP 0057.scaffold00207 445322 1 A T - ReadM SNP 0057.scaffold00207 445479 1 T C - ReadM SNP 0057.scaffold00207 445486 1 T C - ReadM SNP 0057.scaffold00207 445504 1 A G - ReadM SNP 0057.scaffold00207 445605 1 A G - ReadM SNP 0057.scaffold00207 445766 1 G A - ReadM SNP 0057.scaffold00207 445823 1 A C - ReadM SNP 0057.scaffold00207 445888 1 T C - ScafM SNP 0057.scaffold00207 446075 1 G T scaffold9589 ScafM SNP 0057.scaffold00207 446090 1 A G scaffold9589 ReadM SNP 0057.scaffold00207 446126 1 G C - ReadM SNP 0057.scaffold00207 446224 1 C A - ReadM SNP 0057.scaffold00207 446332 1 G A - ScafM SNP 0057.scaffold00207 446445 1 A G scaffold9589 ScafM SNP 0057.scaffold00207 446459 1 G T scaffold9589 ScafM SNP 0057.scaffold00207 446475 1 G T scaffold9589 ScafM INDEL 0057.scaffold00207 446499 3 GTA ... scaffold9589 ReadM SNP 0057.scaffold00207 446672 1 A G - ReadM SNP 0057.scaffold00207 446719 1 A G - ReadM SNP 0057.scaffold00207 446756 1 G C - ReadM SNP 0057.scaffold00207 446781 1 A G - ReadM SNP 0057.scaffold00207 446834 1 A G - ReadM SNP 0057.scaffold00207 446849 1 T C - ReadM SNP 0057.scaffold00207 446990 1 A C - ReadM SNP 0057.scaffold00207 447068 1 T C - ReadM SNP 0057.scaffold00207 447297 1 T A - Both SNP 0057.scaffold00207 447326 1 T G scaffold9589 Both SNP 0057.scaffold00207 447329 1 A T scaffold9589 ReadM SNP 0057.scaffold00207 447445 1 A C - ReadM SNP 0057.scaffold00207 447891 1 T C - ReadM SNP 0057.scaffold00207 448022 1 G C - ReadM SNP 0057.scaffold00207 448030 1 A G - ReadM SNP 0057.scaffold00207 448036 1 C T - Both SNP 0057.scaffold00207 448435 1 C A scaffold9589 ReadM SNP 0057.scaffold00207 448510 1 A T - Both SNP 0057.scaffold00207 448723 1 T C scaffold9589 Both SNP 0057.scaffold00207 448727 1 C G scaffold9589 ReadM SNP 0057.scaffold00207 448849 2 CA TT - ReadM SNP 0057.scaffold00207 448931 1 G A - Both SNP 0057.scaffold00207 448947 1 G A scaffold9589 Both SNP 0057.scaffold00207 448995 1 A G scaffold9589 ReadM SNP 0057.scaffold00207 449037 1 A G - ReadM SNP 0057.scaffold00207 449157 1 C T - ReadM SNP 0057.scaffold00207 449174 1 A G - Both SNP 0057.scaffold00207 449347 1 C A scaffold9589 ScafM SNP 0057.scaffold00207 449412 1 G C scaffold9589 ScafM SNP 0057.scaffold00207 449417 1 C T scaffold9589 ScafM SNP 0057.scaffold00207 449430 1 A G scaffold9589 ScafM SNP 0057.scaffold00207 449633 1 A G scaffold9589 Both SNP 0057.scaffold00207 449667 1 C T scaffold9589 Both SNP 0057.scaffold00207 449717 1 A G scaffold9589 ReadM SNP 0057.scaffold00207 449807 1 T G - ReadM SNP 0057.scaffold00207 449836 1 C T - ReadM SNP 0057.scaffold00207 450306 1 A T - ReadM SNP 0057.scaffold00207 450386 1 C A - ReadM SNP 0057.scaffold00207 450404 1 C T - ReadM INDEL 0057.scaffold00207 450415 1 . A - ReadM SNP 0057.scaffold00207 450475 1 C A - ReadM SNP 0057.scaffold00207 450533 1 A G - ReadM SNP 0057.scaffold00207 450618 1 G A - ReadM SNP 0057.scaffold00207 450725 1 G A - ReadM SNP 0057.scaffold00207 450809 1 A C - ReadM SNP 0057.scaffold00207 450963 1 G A - ReadM INDEL 0057.scaffold00207 450988 1 T . - ReadM SNP 0057.scaffold00207 451021 1 C G - ReadM SNP 0057.scaffold00207 451106 1 G A - ReadM SNP 0057.scaffold00207 451143 1 G A - ReadM SNP 0057.scaffold00207 451171 1 C A - ReadM SNP 0057.scaffold00207 451219 1 A G - ReadM SNP 0057.scaffold00207 451394 1 C T - ReadM SNP 0057.scaffold00207 451647 1 T C - ReadM SNP 0057.scaffold00207 451672 1 A T - ReadM SNP 0057.scaffold00207 451927 1 A G - ReadM SNP 0057.scaffold00207 451958 1 A G - ReadM SNP 0057.scaffold00207 451988 1 C T - ReadM SNP 0057.scaffold00207 452022 1 G T - ReadM SNP 0057.scaffold00207 452133 1 T C - ReadM SNP 0057.scaffold00207 452169 1 A C - ReadM SNP 0057.scaffold00207 452174 1 T C - ReadM SNP 0057.scaffold00207 452320 1 C T - ReadM SNP 0057.scaffold00207 452870 1 A G - ScafM SNP 0057.scaffold00207 453290 1 G T scaffold9589 Both SNP 0057.scaffold00207 453304 1 T C scaffold9589 ScafM SNP 0057.scaffold00207 453391 1 G A scaffold9589 ScafM SNP 0057.scaffold00207 453417 1 C G scaffold9589 Both SNP 0057.scaffold00207 453478 1 A G scaffold9589 Both SNP 0057.scaffold00207 453485 1 C A scaffold9589 Both SNP 0057.scaffold00207 453508 1 A C scaffold9589 Both SNP 0057.scaffold00207 453541 1 C G scaffold9589 ReadM SNP 0057.scaffold00207 453611 1 A T - ReadM SNP 0057.scaffold00207 453742 1 A T - ReadM SNP 0057.scaffold00207 453753 1 T G - ReadM SNP 0057.scaffold00207 453769 1 A C - ReadM SNP 0057.scaffold00207 453972 1 G A - ReadM SNP 0057.scaffold00207 454055 1 A G - ReadM SNP 0057.scaffold00207 454114 1 C T - ReadM SNP 0057.scaffold00207 454138 1 C T - ReadM SNP 0057.scaffold00207 454154 1 G C - ReadM SNP 0057.scaffold00207 454336 1 A G - Both SNP 0057.scaffold00207 454426 1 G A scaffold9589 ReadM SNP 0057.scaffold00207 454514 1 A T - ReadM SNP 0057.scaffold00207 454532 1 T G - ReadM SNP 0057.scaffold00207 454571 1 G A - Both SNP 0057.scaffold00207 454657 1 T G scaffold9589 ReadM SNP 0057.scaffold00207 454804 1 G A - ReadM SNP 0057.scaffold00207 454820 1 A G - ReadM SNP 0057.scaffold00207 454829 1 G A - Both SNP 0057.scaffold00207 454916 1 A G scaffold9589 Both SNP 0057.scaffold00207 454934 1 C A scaffold9589 ReadM SNP 0057.scaffold00207 455109 1 A T - Both INDEL 0057.scaffold00207 455142 2 AT .. scaffold9589 Both SNP 0057.scaffold00207 455292 1 G A scaffold9589 Both SNP 0057.scaffold00207 455391 1 A G scaffold9589 Both SNP 0057.scaffold00207 455427 1 T C scaffold9589 Both SNP 0057.scaffold00207 455444 1 G A scaffold9589 Both SNP 0057.scaffold00207 455453 1 A T scaffold9589 Both SNP 0057.scaffold00207 455515 1 C T scaffold9589 Both SNP 0057.scaffold00207 455540 1 C T scaffold9589 Both SNP 0057.scaffold00207 455624 1 C A scaffold9589 Both SNP 0057.scaffold00207 455632 1 T C scaffold9589 Both SNP 0057.scaffold00207 455753 1 T C scaffold9589 Both SNP 0057.scaffold00207 455899 1 A G scaffold9589 Both SNP 0057.scaffold00207 455960 1 T C scaffold9589 Both SNP 0057.scaffold00207 456074 1 T C scaffold9589 Both SNP 0057.scaffold00207 456123 1 C T scaffold9589 ReadM SNP 0057.scaffold00207 456181 1 A T - ReadM SNP 0057.scaffold00207 456263 1 T C - ReadM SNP 0057.scaffold00207 456291 1 C T - ReadM SNP 0057.scaffold00207 456401 1 T C - ReadM SNP 0057.scaffold00207 456522 1 A G - ReadM SNP 0057.scaffold00207 459381 1 C T - ReadM SNP 0057.scaffold00207 459413 1 A G - ReadM SNP 0057.scaffold00207 459865 1 G A - ReadM SNP 0057.scaffold00207 459900 1 C G - ReadM SNP 0057.scaffold00207 459916 1 G A - ReadM SNP 0057.scaffold00207 459976 1 G C - ReadM SNP 0057.scaffold00207 460000 1 T C - ReadM SNP 0057.scaffold00207 460034 1 T G - ReadM SNP 0057.scaffold00207 460117 1 C T - ReadM SNP 0057.scaffold00207 460124 1 A C - ReadM SNP 0057.scaffold00207 460143 1 A C - ReadM SNP 0057.scaffold00207 460148 1 T C - ReadM SNP 0057.scaffold00207 460515 1 C T - ReadM SNP 0057.scaffold00207 460533 1 T G - ReadM SNP 0057.scaffold00207 460576 1 C T - ReadM SNP 0057.scaffold00207 460752 1 T G - ReadM SNP 0057.scaffold00207 460772 1 G A - ReadM SNP 0057.scaffold00207 460797 1 A C - ReadM SNP 0057.scaffold00207 460848 1 G A - ReadM SNP 0057.scaffold00207 460883 1 G A - ReadM SNP 0057.scaffold00207 461004 1 T C - ReadM SNP 0057.scaffold00207 461074 1 G T - ReadM SNP 0057.scaffold00207 461198 1 C T - ReadM SNP 0057.scaffold00207 461224 1 C T - ReadM SNP 0057.scaffold00207 461244 1 T C - ReadM SNP 0057.scaffold00207 461780 1 C A - ScafM SNP 0057.scaffold00207 462764 1 A T scaffold9589 ScafM SNP 0057.scaffold00207 462820 1 T C scaffold9589 ScafM SNP 0057.scaffold00207 462828 1 T A scaffold9589 ScafM SNP 0057.scaffold00207 462863 1 T G scaffold9589 ScafM SNP 0057.scaffold00207 462882 1 T C scaffold9589 ScafM SNP 0057.scaffold00207 462914 1 A C scaffold9589 ScafM SNP 0057.scaffold00207 462926 1 G A scaffold9589 ScafM INDEL 0057.scaffold00207 462975 3 ... TTT scaffold9589 ScafM SNP 0057.scaffold00207 463041 1 T C scaffold9589 Both SNP 0057.scaffold00207 463129 1 G C scaffold9589 ScafM SNP 0057.scaffold00207 463170 1 A T scaffold9589 ScafM SNP 0057.scaffold00207 463251 1 C T scaffold9589 Both SNP 0057.scaffold00207 463267 2 TG CA scaffold9589 ScafM SNP 0057.scaffold00207 463312 1 A T scaffold9589 Both SNP 0057.scaffold00207 463399 1 T C scaffold9589 ReadM SNP 0057.scaffold00207 463550 1 A G - ReadM SNP 0057.scaffold00207 463650 1 G A - ReadM SNP 0057.scaffold00207 463841 1 G A - ReadM SNP 0057.scaffold00207 463858 1 A G - ReadM SNP 0057.scaffold00207 463911 1 T C - ReadM SNP 0057.scaffold00207 463951 1 A G - ReadM SNP 0057.scaffold00207 463974 1 T A - Both SNP 0057.scaffold00207 464087 1 C T scaffold9589 Both SNP 0057.scaffold00207 464132 1 G A scaffold9589 Both SNP 0057.scaffold00207 464138 1 G A scaffold9589 Both SNP 0057.scaffold00207 464208 1 A T scaffold9589 Both SNP 0057.scaffold00207 464218 1 A C scaffold9589 Both SNP 0057.scaffold00207 464254 1 T C scaffold9589 Both SNP 0057.scaffold00207 464475 1 T C scaffold9589 Both SNP 0057.scaffold00207 464487 1 T G scaffold9589 Both SNP 0057.scaffold00207 464510 1 A G scaffold9589 Both SNP 0057.scaffold00207 464576 1 G T scaffold9589 Both SNP 0057.scaffold00207 464757 1 T A scaffold9589 ReadM SNP 0057.scaffold00207 464946 1 A G - ReadM SNP 0057.scaffold00207 465010 1 T A - ReadM SNP 0057.scaffold00207 465034 1 C G - ReadM SNP 0057.scaffold00207 465062 1 T C - ReadM SNP 0057.scaffold00207 465164 1 A G - ReadM SNP 0057.scaffold00207 465312 1 C T - ReadM SNP 0057.scaffold00207 465369 1 A G - ReadM SNP 0057.scaffold00207 465408 1 C T - ReadM SNP 0057.scaffold00207 465524 1 C T - ReadM SNP 0057.scaffold00207 465579 1 C T - ReadM SNP 0057.scaffold00207 465584 1 C T - ReadM SNP 0057.scaffold00207 465627 1 A G - ReadM SNP 0057.scaffold00207 465668 1 T C - ReadM SNP 0057.scaffold00207 465784 1 T C - ReadM SNP 0057.scaffold00207 465804 1 G T - ReadM SNP 0057.scaffold00207 465848 1 T A - ReadM SNP 0057.scaffold00207 466127 1 A C - ReadM SNP 0057.scaffold00207 466220 1 C T - ReadM SNP 0057.scaffold00207 466267 1 T A - ReadM SNP 0057.scaffold00207 466475 1 G A - ReadM SNP 0057.scaffold00207 466484 1 T C - ReadM SNP 0057.scaffold00207 466504 1 G A - ReadM SNP 0057.scaffold00207 466523 1 C T - ReadM SNP 0057.scaffold00207 466555 1 G C - ReadM SNP 0057.scaffold00207 466615 1 G A - ReadM SNP 0057.scaffold00207 466658 1 C T - ReadM SNP 0057.scaffold00207 466706 1 T G - ReadM SNP 0057.scaffold00207 466760 1 C T - ReadM SNP 0057.scaffold00207 466888 1 G A - ReadM SNP 0057.scaffold00207 466893 1 A C - ReadM SNP 0057.scaffold00207 466940 1 A C - ReadM INDEL 0057.scaffold00207 467019 2 .. GC - ReadM SNP 0057.scaffold00207 467061 1 G T - Read