The
Beta vulgaris
Resource
Sugar beet genetics and genomics
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Blast
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Subseq
PhylomeDB
Blast
Sequence similarity search against assembled genomes of sugar beet and spinach.
Program
blastn -- Nucleotide query and nucleotide db
blastp -- Protein query and protein db
blastx -- Transl. nucl. query and protein db
tblastn -- Protein query and transl. nucl. db
tblastx -- Transl. nucl. query and transl. nucl. db
Query sequences:
Or upload file
(max. 5 MB):
Database(s)
- Advanced parameters
Expect
1e-10
1e-5
1e-3
0.1
10
Word size
2
3
7
11
15
28
100
Low complexity filter
Scoring matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Query genetic code
Standard
Vertebrate Mitochondrial
Yeast Mitochondrial
Mold, Protozoan and Mitochondrial
Invertebrate Mitochondrial
Ciliate, Dasycladacean Nuclear
Echinoderm Mitochondrial
Euplotid Nuclear
Bacterial, Archaeal and Plant Plastid
Alt. Yeast Nuclear
Ascidian Mitochondrial
Alt. Flatworm Mitochondrial
Blepharisma Macronuclear