The Beta vulgaris Resource
Sugar beet genetics and genomics

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RefBeet-1.1: 109 kbp from Bvchr1.sca001:4,402,199..4,511,187

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Overview

Overview

Region

Region

Details

Details

Coding genes

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Tracks

Tracks

1. Annotation

1. Annotation

1.1 Genes

1.1 Genes

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Coding genes [?]

Non-coding genes [?]

1.2. Transcript evidence

1.2. Transcript evidence

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mRNA-seq exonic [?]	Sanger ESTs & 454 reads [?]
mRNA-seq intronic [?]	small RNA reads [?]

1.3. Repeats / low complex regions

1.3. Repeats / low complex regions

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BvRepeats	RepeatModeler
BvRM_low	Uncalled bases (Ns) [?]

2. Other accessions

2. Other accessions

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Mapped Illumina reads [?] [showing 6/6 subtracks]	Uniquely mapped Illumina reads [?] [showing 6/6 subtracks]
Scaffolds of assemblies [?] [showing 5/5 subtracks]	Variants on RefBeet [?] [showing 6/6 subtracks]

3. PhysMap

3. PhysMap

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PhysMap probes [?]

4. BAC and fosmid end sequences

4. BAC and fosmid end sequences

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orphan BAC ends [?]	paired BAC ends [?]
orphan fosmid ends [?]	paired fosmid ends [?]

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