The Beta vulgaris Resource
Sugar beet genetics and genomics

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RefBeet-1.2: 2.83 kbp from Bvchr1.sca001:4,467,448..4,470,277

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Overview

Overview

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Region

Details

Details

Coding genes

SMRT PacBio sequences (Showing 2 of 2 subtracks)

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Tracks

Tracks

1. Annotation

1. Annotation

1.1. Genes

1.1. Genes

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Coding genes [?]

1.2. Expression evidence

1.2. Expression evidence

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mRNA-seq exonic [?]	Sanger ESTs & 454 reads [?]	SMRT PacBio sequences [?] [showing 2/2 subtracks]
mRNA-seq intronic [?]	small RNA reads [?]

1.3. Repeats / low complex regions

1.3. Repeats / low complex regions

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RepeatModeler

Repeats masked for gene prediction [?]

Uncalled bases (Ns) [?]

2. Other accessions

2. Other accessions

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Mapped Illumina reads [?] [showing 6/6 subtracks]	Spinach assembly MUMmer [?]
Spinach assembly LAST [?]	Variants on RefBeet [?] [showing 6/6 subtracks]

3. PhysMap

3. PhysMap

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PhysMap probes [?]

4. BAC and fosmid end sequences

4. BAC and fosmid end sequences

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orphan BAC ends [?]	paired BAC ends [?]
orphan fosmid ends [?]	paired fosmid ends [?]

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